BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007077
(619 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/616 (73%), Positives = 531/616 (86%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LKQIQ QI + G Q+ +TLNK MV CT PS GNL YAE+IF I P L YNL+I
Sbjct: 45 MQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVI 104
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KAF K GSFRK++LLF +LRE G+SPDNFTYPFVFKA+G LGEV++GEKV+G+VVK+GLE
Sbjct: 105 KAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLE 164
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
FDTYVCNS+MDMY +G++ N++++F+EMP +DVVSWNV ISG+VKC R+EDAVDVFRRM
Sbjct: 165 FDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRM 224
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+Q +L P+E TVVSTLSAC ALK LELGKEIHRY+ ++L FT +GNAL+DMYCKCG L
Sbjct: 225 QQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHL 284
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
S ARE+F++MP K VICWTSMVSGYVNCGQL++AR+LF+RSPVRD+VLWTAMINGYVQFN
Sbjct: 285 SIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFN 344
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
RFD+AVALFREMQI R+ PD+F LVALLTGCAQLG LEQGKWIHGYI+EN+I +DAVV T
Sbjct: 345 RFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGT 404
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALIEMYAKCG IEK+LEIF L+EKD ASWTSIICGLAMNGK +KALELF++M+ G KP
Sbjct: 405 ALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKP 464
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITFIGVLSACSHGGLV+EGR+ F +MT VYQI+PKLEHYGCLIDLLGRAG LDEAEEL
Sbjct: 465 DDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEEL 524
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I K PN NNE+IVPLYGALLSACR +GNV+MGE++A L IES DSS HTLLANIYASA
Sbjct: 525 IEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASA 584
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RWEDVT VR+KMK++GV+KVPGCSS+E+NGI+HEFLVGD SH EM+EIYSMLD +AK L
Sbjct: 585 DRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPL 644
Query: 601 LDSKQNAMEGDNLVAI 616
L +N MEG+ V +
Sbjct: 645 LGLDENEMEGEIPVPV 660
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/618 (72%), Positives = 531/618 (85%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
MT LKQI AQIF++GL Q+ +LNKLM FCT P +GNL YAEK+F I+ PCLL YNL+I
Sbjct: 50 MTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLII 109
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KAFAKKG+++++L+LFSKLRE G+ PDNFTYPFVFKA+G+LGEV K EK+ G V KTGLE
Sbjct: 110 KAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLE 169
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
FDTYV NS++DMY L +K LFDEMPD+DV+SWNV ISG+VKC RFEDA++VF RM
Sbjct: 170 FDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRM 229
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
++ LMPDE TVVSTLSACTALK LELGK+IH Y+ ++FTPI+GNALLDMYCKCGCL
Sbjct: 230 QEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCL 289
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
S AR +F+EMP+KNVICWT+MVSGY NCG+LE+AR+LF+ SP+RD+V+WTAMINGYVQFN
Sbjct: 290 SIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFN 349
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
RFDEAVALFREMQI ++KPDKFI+V+LLTGCAQ GA+EQGKWIH +I+ENRI +DAVV T
Sbjct: 350 RFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGT 409
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALIEMYAKCG IEKALEIFY LR KD ASWTSIICGLAMNGK +KALELFS+M G +P
Sbjct: 410 ALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRP 469
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITFIGVLSACSHGGLV+EGR+FFN+M YQI+PK+EHYGCL+DLLGRAGLL+EAEEL
Sbjct: 470 DDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEEL 529
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+KIP+EN I VPLYG+LLSACRIYGNV+MGE++A L K ES DSS HTLLANIYA A
Sbjct: 530 IKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFA 589
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RWEDVT VR+KMK++GV+K PGCSSIE++ IIHEF G PSH EM+EIY ML+ MAK L
Sbjct: 590 DRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAKPL 649
Query: 601 LDSKQNAMEGDNLVAINF 618
L S +N MEG++LV + F
Sbjct: 650 LGSAKNEMEGEDLVGMTF 667
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/610 (70%), Positives = 510/610 (83%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQIQ+QIF+IGL+ + +T+NKLM FC S GNL YAEKIF +Q P L YN+++
Sbjct: 156 MDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMV 215
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K +AK+G RK LLLF +LRE G+ PD FTYPFV KA+G L +V++GEKV G++VKTG++
Sbjct: 216 KMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD 275
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D YV NS++DMY L + N KKLFDEM +D VSWNV ISG+V+C RFEDA++ FR M
Sbjct: 276 LDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREM 335
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+Q N PDE TVVSTLSACTALKNLELG EIH Y+ +EL FT + NALLDMY KCGCL
Sbjct: 336 QQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCL 395
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ AR +FDEM KNVICWTSM+SGY+NCG L +ARDLFD+SPVRD+VLWTAMINGYVQF+
Sbjct: 396 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 455
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
FD+AVALFREMQI R+KPDKF +V LLTGCAQLGALEQGKWIHGY++ENRIT+D VV T
Sbjct: 456 HFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 515
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALIEMY+KCG ++K+LEIFYEL +KD ASWTSIICGLAMNGK ++AL LFS+M GAKP
Sbjct: 516 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKP 575
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITFIGVLSACSHGGLV+EGRRFFN+M +V++I+PK+EHYGC+IDLLGRAGLLDEAEEL
Sbjct: 576 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEEL 635
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I++IP EN EI+VPLYGALLSACRI+ NVDMGE+LA LE IES DSS HTLLANIYAS
Sbjct: 636 IQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASV 695
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RWED VR+KMKE+GV+K+PGCS IE++GI+HEFLVGDPSH EM EI SML+R+ L
Sbjct: 696 DRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQL 755
Query: 601 LDSKQNAMEG 610
L K++ +E
Sbjct: 756 LGLKESQVES 765
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/609 (70%), Positives = 510/609 (83%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQIQ+QIF+IGL+ + +T+NKLM FC S GNL YAEKIF +Q P L YN+++
Sbjct: 110 MDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMV 169
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K +AK+G RK LLLF +LRE G+ PD FTYPFV KA+G L +V++GEKV G++VKTG++
Sbjct: 170 KIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD 229
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D YV NS++DMY L + N KKLFDEM +D VSWNV ISG+V+C RFEDA++ FR M
Sbjct: 230 LDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREM 289
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+Q N PDE TVVSTLSACTALKNLELG EIH Y+ +EL FT + NALLDMY KCGCL
Sbjct: 290 QQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCL 349
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ AR +FDEM KNVICWTSM+SGY+NCG L +ARDLFD+SPVRD+VLWTAMINGYVQF+
Sbjct: 350 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 409
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
FD+AVALFREMQI ++KPDKF +V LLTGCAQLGALEQGKWIHGY++ENRIT+D VV T
Sbjct: 410 HFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 469
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALIEMY+KCG ++K+LEIFYEL +KD ASWTSIICGLAMNGK ++AL LFS+M GAKP
Sbjct: 470 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKP 529
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITFIGVLSACSHGGLV+EGRRFFN+M +V++I+PK+EHYGC+IDLLGRAGLLDEAEEL
Sbjct: 530 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEEL 589
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I++IP EN EI+VPLYGALLSACRI+ NVDMGE+LA LE IES DSS HTLLANIYAS
Sbjct: 590 IQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASV 649
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RWED VR+KMKE+GV+K+PGCS IE++GI+HEFLVGDPSH EM EI SML+R+ L
Sbjct: 650 DRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNRVTGQL 709
Query: 601 LDSKQNAME 609
L K++ +E
Sbjct: 710 LGLKESQVE 718
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/611 (65%), Positives = 508/611 (83%), Gaps = 2/611 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M L QI A+IF++GLQ N +TL K+++FCT PS G++ YAE++ G +QSPCL+ YNL+I
Sbjct: 29 MAHLTQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQSPCLVMYNLMI 88
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KA AK +FRK L+LFS+LR++G++PDNFT P VFKA+G LG+V +GEKVHGYVVK+G
Sbjct: 89 KAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEGEKVHGYVVKSG-- 146
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
FD VCNS+M MYG LGK+ KK+FDE+P++DVVSWNV IS +V +FEDA+ VFRRM
Sbjct: 147 FDACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRM 206
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
R+ NL DE TVVSTLSAC+ L+N E+G+EIHRY++ ELE T +GNALLDMYCKCGC+
Sbjct: 207 RRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAELEMTTKIGNALLDMYCKCGCV 266
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR +FDEM NKNVICWTSMVSGY + G L++AR+LF+RSPVRDIVLWTAMINGYVQFN
Sbjct: 267 DKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFN 326
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
FDEA+ LFR+MQI RL+PD FILV LL GCAQ GALEQGKW+HGYI+EN IT+D VV T
Sbjct: 327 LFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGT 386
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL+++YAKCG +EKALE+FYE++E+D ASWTS+I GLA+NG +KAL+ FSQM G +P
Sbjct: 387 ALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRP 446
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITFIGVL+AC+HGGLV+EGRR+F++MT+ Y+IQPK EHY CLIDLL RAGLLDEAE L
Sbjct: 447 DDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELL 506
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
+ IP E+++I+VPLY +LLSACR YGN+ M E++ LE++E KDSS HTLLA++YASA
Sbjct: 507 LEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASA 566
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
NRWEDVT VR+KMKE+G+RK PGCSSIE+NG++HEF+VG PSH EM +I+S+L ++ K +
Sbjct: 567 NRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGGPSHMEMDDIHSVLGQVTKWM 626
Query: 601 LDSKQNAMEGD 611
L ++ +E +
Sbjct: 627 LGLEREGIESE 637
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/581 (68%), Positives = 470/581 (80%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M+QLKQIQA IF +GLQQ+ +TLNKLM F S G+ YA +IF I P L YNL+I
Sbjct: 21 MSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDPSLFIYNLMI 80
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KAF K GSFR ++ LF +LRE GV PDN+TYP+V K +G +GEV++GEKVH +VVKTGLE
Sbjct: 81 KAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGLE 140
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
FD YVCNS MDMY LG + ++F+EMPD+D VSWN+ ISG+V+C RFE+AVDV+RRM
Sbjct: 141 FDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRM 200
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
N P+E TVVSTLSAC L+NLELGKEIH YI EL+ T IMGNALLDMYCKCG +
Sbjct: 201 WTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIASELDLTTIMGNALLDMYCKCGHV 260
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
S ARE+FD M KNV CWTSMV+GYV CGQL++AR+LF+RSP RDIVLWTAMINGYVQFN
Sbjct: 261 SVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFN 320
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
RF+E +ALF EMQI +KPDKFI+V LLTGCAQ GALEQGKWIH YI+ENRI VDAVV T
Sbjct: 321 RFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGT 380
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALIEMYAKCG IEK+ EIF L+EKD SWTSIICGLAMNGK ++ALELF M + G KP
Sbjct: 381 ALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKP 440
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITF+ VLSACSH GLV+EGR+ F++M+ +Y I+P LEHYGC IDLLGRAGLL EAEEL
Sbjct: 441 DDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEEL 500
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
++K+P +NNEIIVPLYGALLSACR YGN+DMGE+LA L K++S DSS HTLLA+IYASA
Sbjct: 501 VKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASA 560
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+RWEDV VR KMK++G++KVPG S+IE++G + L P
Sbjct: 561 DRWEDVRKVRNKMKDLGIKKVPGYSAIEVDGKWQQRLSEGP 601
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/571 (68%), Positives = 471/571 (82%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M+QLKQIQA IF GLQQ+ + LNKLM F S G+ YA +IF I P L YNL+I
Sbjct: 21 MSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHPSLFIYNLMI 80
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KAF K+GS R ++ LF +LRERGV PDN+TYP+V K +G +GEV++GEK+H +VVKTGLE
Sbjct: 81 KAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLE 140
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
FD YVCNS+MDMY LG + ++F+EMP++D VSWN+ ISG+V+C RFE+AVDV+RRM
Sbjct: 141 FDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRM 200
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ N P+E TVVSTLSAC L+NLELGKEIH YI EL+ TPIMGNALLDMYCKCGC+
Sbjct: 201 QMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANELDLTPIMGNALLDMYCKCGCV 260
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
S ARE+FD M KNV CWTSMV+GYV CGQL++AR LF+RSP RD+VLWTAMINGYVQFN
Sbjct: 261 SVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFN 320
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
F++A+ALF EMQI ++PDKFI+V LLTGCAQLGALEQGKWIH YI+ENRI +DAVV+T
Sbjct: 321 HFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVST 380
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALIEMYAKCG IEK+LEIF L++ D SWTSIICGLAMNGK ++ALELF M + G KP
Sbjct: 381 ALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKP 440
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITF+ VLSAC H GLV+EGR+ F++M+ +Y I+P LEHYGC IDLLGRAGLL EAEEL
Sbjct: 441 DDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEEL 500
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
++K+P++NNEIIVPLYGALLSACR YGN+DMGE+LA L K++S DSS HTLLA+IYASA
Sbjct: 501 VKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASA 560
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
+RWEDV VR KMK++G++KVPG S+IE++G
Sbjct: 561 DRWEDVRKVRSKMKDLGIKKVPGYSAIEVDG 591
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/557 (62%), Positives = 441/557 (79%), Gaps = 2/557 (0%)
Query: 48 IQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG 107
+Q+P LL YN ++K+ A SF K L LF +LR +G+ PDNFT P V K++G L +V +G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
EKVHGY VK GLEFD+YV NS+M MY LGKI K+FDEMP +DVVSWN IS +V
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG 227
RFEDA+ VF+RM Q NL DEGT+VSTLSAC+ALKNLE+G+ I+R++ E E + +G
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NAL+DM+CKCGCL +AR +FD M +KNV CWTSMV GYV+ G++++AR LF+RSPV+D+V
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
LWTAM+NGYVQFNRFDEA+ LFR MQ ++PD F+LV+LLTGCAQ GALEQGKWIHGYI
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
NENR+TVD VV TAL++MYAKCG IE ALE+FYE++E+D ASWTS+I GLAMNG +AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+L+ +M + G + D ITF+ VL+AC+HGG V EGR+ F++MTE + +QPK EH CLIDL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
L RAGLLDEAEELI K+ E++E +VP+Y +LLSA R YGNV + E++A LEK+E DS
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP--SHSE 585
S HTLLA++YASANRWEDVTNVR+KMK++G+RK PGCSSIEI+G+ HEF+VGD SH +
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545
Query: 586 MKEIYSMLDRMAKTLLD 602
M EI SML + +LD
Sbjct: 546 MDEINSMLHQTTNLMLD 562
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 193/427 (45%), Gaps = 69/427 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ + GL+ + N LM + S G + K+F + ++++N LI ++
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGM--YASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 65 KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G F ++ +F ++ +E + D T A L ++ GE+++ +VV T E
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSV 182
Query: 124 YVCNSIMDM-------------------------------YGVLGKICNVKKLFDEMPDK 152
+ N+++DM Y G+I + LF+ P K
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
DVV W ++G+V+ RF++A+++FR M Q + PD +VS L+ C LE GK I
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCM-QTAGIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 213 HRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H YIN+ + ++G AL+DMY KCGC+ A E+F E+ ++ WTS++ G G
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+A D L+ EM+ + ++ D VA+LT C
Sbjct: 362 GRALD-------------------------------LYYEMENVGVRLDAITFVAVLTAC 390
Query: 332 AQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
G + +G+ I H + + + + LI++ + GL+++A E+ ++R + +
Sbjct: 391 NHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETL 450
Query: 391 TSIICGL 397
+ C L
Sbjct: 451 VPVYCSL 457
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 142/301 (47%), Gaps = 11/301 (3%)
Query: 27 MVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSP 86
MVF + S G + A +F ++ + ++ + + F ++L LF ++ G+ P
Sbjct: 219 MVF-GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRP 277
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
DNF + G +++G+ +HGY+ + + D V +++DMY G I ++F
Sbjct: 278 DNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVF 337
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
E+ ++D SW I G A+D++ M + + D T V+ L+AC +
Sbjct: 338 YEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM-ENVGVRLDAITFVAVLTACNHGGFV 396
Query: 207 ELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNKN----VICWTS 260
G++I + + P + L+D+ C+ G L EA EL D+M ++ V + S
Sbjct: 397 AEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCS 456
Query: 261 MVSGYVNCGQL---EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
++S N G + E+ + ++ V D T + + Y NR+++ + R+M+ + +
Sbjct: 457 LLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGI 516
Query: 318 K 318
+
Sbjct: 517 R 517
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/553 (62%), Positives = 438/553 (79%), Gaps = 2/553 (0%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
++K+ A+ SF K L LF +LR +G+ PDNFT P V K++G L +V +GEKVHGY VKTG
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
LE D+YVCNS+M MY LGK+ K+FDEMP++DVVSWN IS +V RFEDA+ VF+
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
RM + NL DEGT+VSTLSAC+ LKNLE+G+ I+RY+ E E + GNAL+DM+CKCG
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEMSVRTGNALVDMFCKCG 180
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
CL +AR +FD M +KNV CWTSMVSGYV+ G+ ++AR+LF+RSPV+D+VLWTAM+NGYVQ
Sbjct: 181 CLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQ 240
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
FNRFDEA+ LFR MQ R++PD F+LV+LLTGCAQ GALEQGKWIHGYI ENR+TVD VV
Sbjct: 241 FNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVV 300
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TAL++MYAKCG IE AL +FYE++E+D ASWTS+I GLA NG +AL+L+ +M + G
Sbjct: 301 GTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENVGV 360
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+ DDITF+ VL+ACSHGG V EGRR F +MTE ++IQPK EHY CLIDLL RAGLLDEAE
Sbjct: 361 RLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAE 420
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
ELI K+ E ++ +VP+Y +LLSA R YGNV + E++A LEK+E DSS HTLLA++YA
Sbjct: 421 ELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYA 480
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG-DP-SHSEMKEIYSMLDRM 596
SANRWEDVTNVR+KMK++G+RK PGCSSIE++G+ HEF+VG DP SH +M EI SML +
Sbjct: 481 SANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGVSHEFIVGNDPSSHPKMDEINSMLHQT 540
Query: 597 AKTLLDSKQNAME 609
+LD + +E
Sbjct: 541 THLMLDLEHEEIE 553
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 194/427 (45%), Gaps = 69/427 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ + GL+ + N LM + + G + K+F + ++++N LI ++
Sbjct: 50 EKVHGYAVKTGLESDSYVCNSLMGM--YAALGKMEITHKVFDEMPERDVVSWNGLISSYV 107
Query: 65 KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G F ++ +F ++ RE + D T A L ++ GE+++ YVV T E
Sbjct: 108 GHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVV-TEFEMSV 166
Query: 124 YVCNSIMDMY---GVL----------------------------GKICNVKKLFDEMPDK 152
N+++DM+ G L G+ ++LF+ P K
Sbjct: 167 RTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVK 226
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
DVV W ++G+V+ RF++A+++FR M Q + PD +VS L+ C LE GK I
Sbjct: 227 DVVLWTAMMNGYVQFNRFDEALELFRCM-QTARIRPDNFVLVSLLTGCAQTGALEQGKWI 285
Query: 213 HRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H YI + + ++G AL+DMY KCGC+ A +F EM ++ WTS++ G G
Sbjct: 286 HGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMS 345
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+A D L+ EM+ + ++ D VA+LT C
Sbjct: 346 GRALD-------------------------------LYYEMENVGVRLDDITFVAVLTAC 374
Query: 332 AQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
+ G + +G+ I + E ++I + + LI++ + GL+++A E+ ++ + +
Sbjct: 375 SHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTL 434
Query: 391 TSIICGL 397
+ C L
Sbjct: 435 VPVYCSL 441
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ S+G A ++F ++ + ++ + + F ++L LF ++ + PDNF
Sbjct: 207 YVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVL 266
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ G +++G+ +HGY+ + + D V +++DMY G I +F EM +
Sbjct: 267 VSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKE 326
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+D SW I G A+D++ M + + D+ T V+ L+AC+ + G+
Sbjct: 327 RDTASWTSLIYGLATNGMSGRALDLYYEM-ENVGVRLDDITFVAVLTACSHGGFVAEGRR 385
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNKN----VICWTSMVSGY 265
I + + + P + L+D+ C+ G L EA EL D+M + V + S++S
Sbjct: 386 IFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAA 445
Query: 266 VNCGQL---EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
N G + E+ + ++ V D T + + Y NR+++ + R+M+ + ++
Sbjct: 446 RNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIR 501
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/616 (59%), Positives = 439/616 (71%), Gaps = 91/616 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LKQIQ QI + G Q+ +TLNK MV CT PS GNL YAE+IF I P L YNL+I
Sbjct: 45 MQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVI 104
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KAF K GSFRK++LLF +LRE G+SPDNFTYPFVFKA+G LGEV++GEKV+G+VVK+GLE
Sbjct: 105 KAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLE 164
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
FDTYVCNS+MDMY +G++ N++++F+EMP +DVVSWNV ISG+VKC R+EDAVDVFR++
Sbjct: 165 FDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRQI 224
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
N MP + T I +++ Y CG L
Sbjct: 225 ---FNDMPIK--------------------------------TVICWTSMVSGYVNCGQL 249
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
EARELF+ P ++V+ WT+M++G YVQFN
Sbjct: 250 DEARELFERSPVRDVVLWTAMING-------------------------------YVQFN 278
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
RFD+AVALFREMQI R+ PD+F LVALLT DAVV T
Sbjct: 279 RFDDAVALFREMQIKRVSPDRFTLVALLT-------------------------DAVVGT 313
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALIEMYAKCG IEK+LEIF L+EKD ASWTSIICGLAMNGK +KALELF++M+ G KP
Sbjct: 314 ALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKP 373
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITFIGVLSACSHGGLV+EGR+ F +MT VYQI+PKLEHYGCLIDLLGRAG LDEAEEL
Sbjct: 374 DDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEEL 433
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I K PN NNE+IVPLYGALLSACR +GNV+MGE++A L IES DSS HTLLANIYASA
Sbjct: 434 IEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASA 493
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RWEDVT VR+KMK++GV+KVPGCSS+E+NGI+HEFLVGD SH EM+EIYSMLD +AK L
Sbjct: 494 DRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPL 553
Query: 601 LDSKQNAMEGDNLVAI 616
L +N MEG+ V +
Sbjct: 554 LGLDENEMEGEIPVPV 569
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/364 (78%), Positives = 327/364 (89%)
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MYCKCGCLS AR++FDEMP+KNVICWTSMVSGYVN G+L+KAR+LF+RSPV+D+VLWTAM
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
INGYVQFN FDEAVALF+EMQI R+KPDKF+LVALLTGCAQ+GALEQG WIHGYI+E I
Sbjct: 61 INGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGI 120
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
VDAVV T+LIEMY+KCG IEKAL IF LREKD A+WTSIICGLAMNGK +KALELFS+
Sbjct: 121 PVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFSK 180
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M A PD++TFIGVLSACSHGGLV+EGR FFN+MT +Y I+PKLEHYGCLIDLLGRAG
Sbjct: 181 MKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAG 240
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
LDEAEELI+KI N NNEIIVPLYG+LLSACRIY NV MGE++A L KIES+DSS HTL
Sbjct: 241 QLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSSVHTL 300
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
LANIYASA RW DV VR++MK++GV+KVPGCSSIE++GI+HEFLVG+PS SEM+EIYSM
Sbjct: 301 LANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGNPSCSEMREIYSM 360
Query: 593 LDRM 596
LDRM
Sbjct: 361 LDRM 364
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%), Gaps = 33/216 (15%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
S++ Y G++ ++LF+ P KDVV W I+G+V+ F++AV +F+ M Q +
Sbjct: 27 TSMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEM-QIQRV 85
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARE 245
PD+ +V+ L+ C + LE G IH YI+++ + ++G +L++MY KCGC+ +A
Sbjct: 86 KPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALR 145
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+F + K+ WTS++ G G+ KA +LF +
Sbjct: 146 IFCGLREKDTATWTSIICGLAMNGKTSKALELFSK------------------------- 180
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
M+ + PD+ + +L+ C+ G +E+G+
Sbjct: 181 ------MKQVEAIPDEVTFIGVLSACSHGGLVEEGR 210
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 141/296 (47%), Gaps = 10/296 (3%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ ++G L A ++F ++ + +I + + F +++ LF +++ + V PD F
Sbjct: 33 YVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQIQRVKPDKFVL 92
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ +G +++G +HGY+ + G+ D V S+++MY G I ++F + +
Sbjct: 93 VALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIFCGLRE 152
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
KD +W I G + A+++F +M+Q +PDE T + LSAC+ +E G+E
Sbjct: 153 KDTATWTSIICGLAMNGKTSKALELFSKMKQ-VEAIPDEVTFIGVLSACSHGGLVEEGRE 211
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNKN----VICWTSMVSG- 264
+ P + + L+D+ + G L EA EL ++ N N V + S++S
Sbjct: 212 FFNSMTSIYNIEPKLEHYGCLIDLLGRAGQLDEAEELIKKIVNANNEIIVPLYGSLLSAC 271
Query: 265 --YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
Y N E+ + + RD + T + N Y R+ + + REM+ + +K
Sbjct: 272 RIYKNVQMGERVAEQLVKIESRDSSVHTLLANIYASAGRWVDVNRVRREMKDLGVK 327
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/602 (43%), Positives = 401/602 (66%), Gaps = 7/602 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQI +Q GL NP +++ FC G++ YA +F ++ P +N +I
Sbjct: 32 MAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMI 91
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K +++ G ++ ++ ++ ERGV PD +TYPF+ K VK G ++H ++VK G
Sbjct: 92 KGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFS 151
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ +V N+++ +Y + G++ + +FD DVV+WNV ISG+ + +F++++ +F M
Sbjct: 152 SNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEM 211
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI--MGNALLDMYCKCG 238
+ ++P T+VS LSAC+ LK+L +GK +HRY+ ++L+ P+ + NAL+DMY CG
Sbjct: 212 ER-MRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV-KDLKIEPVRVLENALIDMYAACG 269
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A +FD M +++VI WT++V+G+ N GQ+ AR+ FD+ P RD V WTAMI+GY+Q
Sbjct: 270 DMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQ 329
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
NRF E ++LFREMQ +KPD+F +V++LT CA LGALE G+WI YI++N I +D+ V
Sbjct: 330 VNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFV 389
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI+MY CG +EKA+ IF + +D SWT++I GLA+NG +AL++FSQM+
Sbjct: 390 GNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASI 449
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD++T IGVL AC+H G+VD+G++FF MT + I+P + HYGC++DLLGRAG L EA
Sbjct: 450 TPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAH 509
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+I+ +P + N I+ +G+LL ACR++ + +M E A + ++E ++ + + LL NIYA
Sbjct: 510 EVIKNMPVKPNSIV---WGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYA 566
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
+ NRWE + VR+ M + G++K PGCS IE+NG +HEF+ GD H + KEIYS LD M+
Sbjct: 567 ACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSV 626
Query: 599 TL 600
L
Sbjct: 627 DL 628
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 256/515 (49%), Positives = 370/515 (71%), Gaps = 3/515 (0%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N+LI+ A++GSF + + ++ LR RG+ D+FTYPFV +AVG L +G K H +K
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIK 77
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
TG +D Y +S+M+MY +LG++ +K+FDEMP + +V WN+ + +++C R+ AV +
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVAL 137
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
+M + + PD T+V+ ++AC+ ++L LG+ IH Y++ F + NALLDMY K
Sbjct: 138 SEQMERS-GVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVANALLDMYTK 196
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CL EA +LF++MP +N+I WT +VSGY GQL+KAR LF++ +D++LWTAMIN
Sbjct: 197 NDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINAC 256
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ F+EA+ LFR+MQ+ R++PD+F +V LLT CA LGAL+QG+WIH Y + ++ +DA
Sbjct: 257 VQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDA 316
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ TALI+MY+KCG IEK+LE+F+ ++ +DA +WT+IICGLA NG+ +ALELF M
Sbjct: 317 VLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRS 376
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KPD +TFIGVLSAC HGGLVDEGR+ F+ M EVYQI+P++EHY CL++LLGRAGLLDE
Sbjct: 377 KVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDE 436
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
AE LI +P N+ +PL+GALL+AC+ +GNV+M E+L + + +S+ + + L++N+
Sbjct: 437 AERLIGDVP--INKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNV 494
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
YA+A+RWEDV VR KM V+K GCS IE+ G
Sbjct: 495 YATASRWEDVIRVRGKMAHPTVKKTAGCSLIEVKG 529
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 184/404 (45%), Gaps = 68/404 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++ A + G + + T + LM T G + A K+F + S L+ +N++++ +
Sbjct: 69 RKAHAAAIKTGFRWDAYTGSSLMEMYTML--GRVDIARKVFDEMPSRALVLWNMMVRCYI 126
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + ++ L ++ GV+PD T A ++ G ++H Y+ F+
Sbjct: 127 RCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNV-FGFNLP 185
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH-------------------- 164
V N+++DMY + KLF++MP ++++SW + +SG+
Sbjct: 186 VANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKD 245
Query: 165 -----------VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
V+ FE+A+ +FR M Q + PD TVV+ L+ C L L+ G+ IH
Sbjct: 246 LILWTAMINACVQHGCFEEALTLFRDM-QMQRVEPDRFTVVTLLTCCANLGALDQGEWIH 304
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+Y Q +++ ++G AL+DMY KCG + ++ E+F M ++ WT+++ G GQ
Sbjct: 305 QYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAG 364
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+ A+ LF++MQ ++KPD + +L+ C
Sbjct: 365 R-------------------------------ALELFQDMQRSKVKPDGVTFIGVLSACC 393
Query: 333 QLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
G +++G K H +I + L+ + + GL+++A
Sbjct: 394 HGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEA 437
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 135/286 (47%), Gaps = 12/286 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +F + L+ + +I A + G F ++L LF ++ + V PD FT +
Sbjct: 229 GQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLL 288
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
LG + +GE +H Y + ++ D + +++DMY G I ++F M +D
Sbjct: 289 TCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDAT 348
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G + A+++F+ M Q + PD T + LSAC ++ G++
Sbjct: 349 AWTAIICGLATNGQAGRALELFQDM-QRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHA 407
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVI-CWTSMVSGYVNCGQL 271
+ + + P + + L+++ + G L EA L ++P NK+ + + ++++ G +
Sbjct: 408 MREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNV 467
Query: 272 EKARDLFDR-----SPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
E + L R S + D+ L M N Y +R+++ + + +M
Sbjct: 468 EMSERLTKRICEQDSQITDVNL--LMSNVYATASRWEDVIRVRGKM 511
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/515 (49%), Positives = 369/515 (71%), Gaps = 3/515 (0%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N+LI+ A++GSF + + ++ LR RG+ D+FTYPFV +AVG L +G K H VK
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVK 77
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
TG +D Y +S+M+MY +LG++ +K+FDEMP + +V WN+ + +++C + AV +
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVAL 137
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
+M + + PD T+V+ ++AC+ ++L LG+ IH Y++ F + NALLDMY K
Sbjct: 138 SEQMERS-GVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVANALLDMYTK 196
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CL EA +LF++MP +N+I WT +VSGY GQL+KAR LF++ +D++LWTAMIN
Sbjct: 197 NDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINAC 256
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ F+EA+ LFR+MQ+ R++PD+F +V LLT CA LGAL+QG+WIH Y + ++ +DA
Sbjct: 257 VQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDA 316
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ TALI+MY+KCG IEK+LE+F+ ++ +DA +WT+IICGLA NG+ +ALELF M
Sbjct: 317 VLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRS 376
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KPD +TFIGVLSAC HGGLVDEGR+ F+ M EVYQI+P++EHY CL++LLGRAGLLDE
Sbjct: 377 KVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDE 436
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
AE LI +P N+ +PL+GALL+AC+ +GNV+M E+L + + +S+ + + L++N+
Sbjct: 437 AERLIGDVP--INKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNV 494
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
YA+A+RWEDV VR KM V+K GCS IE+ G
Sbjct: 495 YATASRWEDVIRVRGKMAHPTVKKNAGCSLIEVKG 529
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 184/404 (45%), Gaps = 68/404 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++ A + G + + T + LM T G + A K+F + S L+ +N++++ +
Sbjct: 69 RKAHAAAVKTGFRWDAYTGSSLMEMYTML--GRVDIARKVFDEMPSRALVLWNMMVRCYI 126
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + ++ L ++ GV+PD T A ++ G ++H Y+ F+
Sbjct: 127 RCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNV-FGFNLP 185
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH-------------------- 164
V N+++DMY + KLF++MP ++++SW + +SG+
Sbjct: 186 VANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKD 245
Query: 165 -----------VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
V+ FE+A+ +FR M Q + PD TVV+ L+ C L L+ G+ IH
Sbjct: 246 LILWTAMINACVQHGCFEEALTLFRDM-QMQRVEPDRFTVVTLLTCCANLGALDQGEWIH 304
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+Y Q +++ ++G AL+DMY KCG + ++ E+F M ++ WT+++ G GQ
Sbjct: 305 QYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAG 364
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+ A+ LF++MQ ++KPD + +L+ C
Sbjct: 365 R-------------------------------ALELFQDMQRSKVKPDGVTFIGVLSACC 393
Query: 333 QLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
G +++G K H +I + L+ + + GL+++A
Sbjct: 394 HGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEA 437
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 135/286 (47%), Gaps = 12/286 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +F + L+ + +I A + G F ++L LF ++ + V PD FT +
Sbjct: 229 GQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLL 288
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
LG + +GE +H Y + ++ D + +++DMY G I ++F M +D
Sbjct: 289 TCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDAT 348
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G + A+++F+ M Q + PD T + LSAC ++ G++
Sbjct: 349 AWTAIICGLATNGQAGRALELFQDM-QRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHA 407
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVI-CWTSMVSGYVNCGQL 271
+ + + P + + L+++ + G L EA L ++P NK+ + + ++++ G +
Sbjct: 408 MREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNV 467
Query: 272 EKARDLFDR-----SPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
E + L R S + D+ L M N Y +R+++ + + +M
Sbjct: 468 EMSERLTKRICEQDSQITDVNL--LMSNVYATASRWEDVIRVRGKM 511
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/601 (42%), Positives = 395/601 (65%), Gaps = 5/601 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QL+Q+ Q + GL NP N++M FC +G+ YA ++F I P L +N +I
Sbjct: 31 MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMI 90
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ +++ + + L+ ++ RGV PD +T+PF+FK ++ G ++HG+V+K GL+
Sbjct: 91 RGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQ 150
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
++ +V +++ MY + G++ + +FD P DV++WN+ IS + K +FE++ +F M
Sbjct: 151 YNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVM 210
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
++P T+V LSAC+ LK+L GK++H Y+ N ++E ++ NA++DMY CG
Sbjct: 211 EDK-QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGE 269
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A +F M N+++I WT++VSG+ N G+++ AR+ FD+ P +D V WTAMI+GY++
Sbjct: 270 MDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 329
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
NRF EA+ LFR MQ +KPD+F +V++LT CA LGALE G+WI YI+ N+I D V
Sbjct: 330 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 389
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI+MY KCG ++KA IF E+ ++D +WT++I GLA+NG KAL++FS M+
Sbjct: 390 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 449
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD+IT+IGVLSAC+H GLVD+GR++F MT + I+P + HYGCL+DLL RAG L EA E
Sbjct: 450 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 509
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+I +P + N I+ +GALL+ CR+Y DM E + + ++E + + + LL NIYA+
Sbjct: 510 VIENMPIKANSIV---WGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAA 566
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
RW D+ +RQ M + G++K PGCS IE+NG +HEF+ GD SH + K I + LD+M +
Sbjct: 567 CKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQD 626
Query: 600 L 600
L
Sbjct: 627 L 627
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/601 (42%), Positives = 395/601 (65%), Gaps = 5/601 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QL+Q+ Q + GL NP N++M FC +G+ YA ++F I P L +N +I
Sbjct: 52 MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMI 111
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ +++ + + L+ ++ RGV PD +T+PF+FK ++ G ++HG+V+K GL+
Sbjct: 112 RGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQ 171
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
++ +V +++ MY + G++ + +FD P DV++WN+ IS + K +FE++ +F M
Sbjct: 172 YNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVM 231
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
++P T+V LSAC+ LK+L GK++H Y+ N ++E ++ NA++DMY CG
Sbjct: 232 EDK-QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGE 290
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A +F M N+++I WT++VSG+ N G+++ AR+ FD+ P +D V WTAMI+GY++
Sbjct: 291 MDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 350
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
NRF EA+ LFR MQ +KPD+F +V++LT CA LGALE G+WI YI+ N+I D V
Sbjct: 351 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 410
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI+MY KCG ++KA IF E+ ++D +WT++I GLA+NG KAL++FS M+
Sbjct: 411 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 470
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD+IT+IGVLSAC+H GLVD+GR++F MT + I+P + HYGCL+DLL RAG L EA E
Sbjct: 471 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 530
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+I +P + N I+ +GALL+ CR+Y DM E + + ++E + + + LL NIYA+
Sbjct: 531 VIENMPIKANSIV---WGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAA 587
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
RW D+ +RQ M + G++K PGCS IE+NG +HEF+ GD SH + K I + LD+M +
Sbjct: 588 CKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQD 647
Query: 600 L 600
L
Sbjct: 648 L 648
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 255/515 (49%), Positives = 366/515 (71%), Gaps = 3/515 (0%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
NLLI+ A++GSF + + ++ LR RG+ D+FTYPFV +A+G L +G K H +K
Sbjct: 15 NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRAIGVLKLSVEGRKAHAAAMK 74
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
TG +D Y +S+MDMY +LG+ +KLFDEMP + +V WN+ I +V+C R+ A+ +
Sbjct: 75 TGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCYVRCGRYTAAIAL 134
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
M + L PD+ T+V++++ C+ +L LG+ IH Y++ F+ + NALLDMY K
Sbjct: 135 AEEMERS-GLTPDKVTLVTSVTVCSRAGDLSLGRRIHAYMDGVFGFSLPVANALLDMYMK 193
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
GCL EA +LF++MP++N+I WT +VSGY GQL+KAR LF + +D+++WTAMIN
Sbjct: 194 NGCLEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINAC 253
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ F+EA++LFREMQ+ R++PD+F +V LLT CA LGAL+QG+WIH + + ++ VDA
Sbjct: 254 VQHGCFEEALSLFREMQMQRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDA 313
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ TALI+MYAKCG ++K++E+F +++ +D +WTSIICGLA NG+ +ALELF M
Sbjct: 314 VLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTSIICGLATNGQAGRALELFEDMERS 373
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KPD ITFIGVLSAC HGGLVDEGR+ F+ M +VY+I P++EHY CL++LLGRAGLLDE
Sbjct: 374 KVKPDSITFIGVLSACCHGGLVDEGRKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLDE 433
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
AE+LIR I + N+ +PL+GALL+AC+ GNV+M E+L + + + + L++N+
Sbjct: 434 AEKLIRDI--QINKDAMPLFGALLTACKAQGNVEMSERLTKRIGEQGYQIPDVNLLMSNV 491
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
YA+A+RWED VR KM ++K GCS IE+ G
Sbjct: 492 YATASRWEDAIRVRSKMAHPTIKKTAGCSLIEVKG 526
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 211/457 (46%), Gaps = 70/457 (15%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++ A + G + T + LM T ++ A K+F + L+ +N++I+ +
Sbjct: 66 RKAHAAAMKTGFWWDAYTASSLMDMYTLLGRADV--ARKLFDEMPHRALVVWNMMIRCYV 123
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + ++ L ++ G++PD T G++ G ++H Y+ F
Sbjct: 124 RCGRYTAAIALAEEMERSGLTPDKVTLVTSVTVCSRAGDLSLGRRIHAYMDGV-FGFSLP 182
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV------------------- 165
V N+++DMY G + KLF++MP ++++SW + +SG+
Sbjct: 183 VANALLDMYMKNGCLEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVLFYQCSEKD 242
Query: 166 ---------KCMR---FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
C++ FE+A+ +FR M Q + PD T+V+ L+ C L L+ G+ IH
Sbjct: 243 LIMWTAMINACVQHGCFEEALSLFREM-QMQRVEPDRFTIVTLLTCCANLGALDQGEWIH 301
Query: 214 RY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
++ ++++++ ++G AL+DMY KCG + ++ E+F++M ++ WTS++ G GQ
Sbjct: 302 QFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTSIICGLATNGQAG 361
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+A +LF+ +M+ ++KPD + +L+ C
Sbjct: 362 RALELFE-------------------------------DMERSKVKPDSITFIGVLSACC 390
Query: 333 QLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAAS- 389
G +++G K H + RI + L+ + + GL+++A ++ +++ KDA
Sbjct: 391 HGGLVDEGRKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPL 450
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
+ +++ G + + L ++ G + D+ +
Sbjct: 451 FGALLTACKAQGNVEMSERLTKRIGEQGYQIPDVNLL 487
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +F L+ + +I A + G F ++L LF +++ + V PD FT +
Sbjct: 226 GQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDRFTIVTLL 285
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
LG + +GE +H + V ++ D + +++DMY G + ++F++M +D
Sbjct: 286 TCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTT 345
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G + A+++F M + + PD T + LSAC ++ G++
Sbjct: 346 AWTSIICGLATNGQAGRALELFEDMERS-KVKPDSITFIGVLSACCHGGLVDEGRKQFHA 404
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVI-CWTSMVSGYVNCGQL 271
+ P + + L+++ + G L EA +L ++ NK+ + + ++++ G +
Sbjct: 405 MKDVYRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTACKAQGNV 464
Query: 272 EKARDLFDR-----SPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
E + L R + D+ L M N Y +R+++A+ + +M
Sbjct: 465 EMSERLTKRIGEQGYQIPDVNL--LMSNVYATASRWEDAIRVRSKM 508
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/516 (49%), Positives = 364/516 (70%), Gaps = 6/516 (1%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N+LI+ A++GSF + + ++ LR RG+ D++TYPFV +A+G + +G KVH VK
Sbjct: 15 NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAAVK 74
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
TG +D Y +S+++MY +LG++ +K+FDEMP + +V WN+ + +++C RF AV +
Sbjct: 75 TGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVAL 134
Query: 177 FRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
M R G PD T+V+ ++AC+ +L LG+ I Y++ F+ + NALLDMY
Sbjct: 135 AEEMERSGAT--PDRVTLVTAVTACSRAGDLSLGRRIRAYMDGVFGFSLPVANALLDMYT 192
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G L EA ++F +MP +N+I WT +VSGY GQL+KAR LF + +D++LWTAMIN
Sbjct: 193 KNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINA 252
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
VQ F+EA+ LFR+MQ+ R++PDKF +V LLT CA +GAL+QG+WIH Y + +D
Sbjct: 253 CVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKID 312
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
AV+ TALIEMY+KCG ++K+L+IF ++ +DAA+WT+IICGLA NG+ +KALELF +M
Sbjct: 313 AVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKALELFEEMQR 372
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
KPD ITFIGVL+AC HGGLVDEGRR F M E+YQI+P++EHY CL++LLG AGLL
Sbjct: 373 SKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLLY 432
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE-SKDSSFHTLLA 534
EAE+LIR +P N+ + PL+GALL+AC+ YGNV+M E+L + K + S++ + L++
Sbjct: 433 EAEKLIRDMPVNNDTM--PLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNPDVNVLMS 490
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
N+YA+A+RWE+ VR KM V+K GCS IE+
Sbjct: 491 NVYATASRWEESIRVRSKMTHPAVKKTAGCSMIEVK 526
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 169/369 (45%), Gaps = 67/369 (18%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ A + G + + T + L+ T G + +A K+F + L+ +N++++ +
Sbjct: 66 RKVHAAAVKTGFRWDAYTASSLLEMYTML--GRVDFARKVFDEMPQRFLVLWNMMMRCYI 123
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G F ++ L ++ G +PD T A G++ G ++ Y+ F
Sbjct: 124 RCGRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGV-FGFSLP 182
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV-------------KCMR-- 169
V N+++DMY G + K+F +MP+++++SW + +SG+ +C +
Sbjct: 183 VANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKD 242
Query: 170 ----------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
FE+A+ +FR M Q + PD+ TVV+ L+ C + L+ G+ IH
Sbjct: 243 LILWTAMINACVQHGSFEEALTLFRDM-QLQRVEPDKFTVVTLLTCCANIGALDQGEWIH 301
Query: 214 RYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+Y + ++ ++G AL++MY KCG + ++ ++F M ++ WT+++ G GQ
Sbjct: 302 QYAEGRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQAS 361
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
KA +LF+ EMQ + KPD + +L C
Sbjct: 362 KALELFE-------------------------------EMQRSKTKPDGITFIGVLNACC 390
Query: 333 QLGALEQGK 341
G +++G+
Sbjct: 391 HGGLVDEGR 399
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 137/307 (44%), Gaps = 11/307 (3%)
Query: 16 LQQNPE--TLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSL 73
QQ PE ++ ++ + G L A +F L+ + +I A + GSF ++L
Sbjct: 204 FQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEAL 263
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
LF ++ + V PD FT + +G + +GE +H Y ++ D + ++++MY
Sbjct: 264 TLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMY 323
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
G + ++F M +D +W I G + A+++F M Q PD T
Sbjct: 324 SKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKALELFEEM-QRSKTKPDGITF 382
Query: 194 VSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
+ L+AC ++ G+ + + + + P + + L+++ G L EA +L +MP
Sbjct: 383 IGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLLYEAEKLIRDMP 442
Query: 252 --NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV----LWTAMINGYVQFNRFDEA 305
N + + ++++ G +E + L R D + M N Y +R++E+
Sbjct: 443 VNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNPDVNVLMSNVYATASRWEES 502
Query: 306 VALFREM 312
+ + +M
Sbjct: 503 IRVRSKM 509
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 257/602 (42%), Positives = 404/602 (67%), Gaps = 6/602 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
++QLKQIQ+Q+ GL ++ ++L+ FC +L Y I + ++P ++N+ I
Sbjct: 19 ISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAI 78
Query: 61 KAFAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ F + R++++L+ + L+ G PDN+TYP +FKA L ++ G ++ G+V+ G
Sbjct: 79 RGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGF 138
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ D +V N+++ + G + +K+FD+ +D+VSWN I+G+V+ +A++ +R
Sbjct: 139 DSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYRE 198
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCG 238
M+ + PDE T++ +S+C L++L+LG+E H YI + L+ T + NAL+DMY KCG
Sbjct: 199 MKVE-GIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCG 257
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L AR+LFD M NK ++ WT+MV GY G L+ A LFD P +D+V W AMI GYV
Sbjct: 258 NLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVH 317
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
NR EA+ALF EMQ + + PD+ +V+ L+ C+QLGAL+ G WIH YI ++ ++++ +
Sbjct: 318 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVAL 377
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TALI+MYAKCG I KA+++F EL +++ +WT+II GLA++G + A+ FS+MI
Sbjct: 378 GTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 437
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD++TF+G+LSAC HGGLV+EGR++F+ M+ + + PKL+HY C++DLLGRAGLL+EAE
Sbjct: 438 MPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAE 497
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
ELI+ +P E + ++ +GAL ACRI+GNV MGE+ A+ L +++ DS + LLAN+Y
Sbjct: 498 ELIKSMPIEADAVV---WGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYG 554
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
A W++ R+ M++ GV K PGCSSIE+NGI++EF+V D SH + ++IY L ++ +
Sbjct: 555 EAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTR 614
Query: 599 TL 600
L
Sbjct: 615 QL 616
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/515 (49%), Positives = 361/515 (70%), Gaps = 3/515 (0%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
NLLI+ A++ S + ++ LRERG+ D+FTYPFV +A+G L +G K H +K
Sbjct: 15 NLLIRTLARRSSHADVMAVYYDLRERGLVADSFTYPFVLRAIGALQISVEGRKAHAATLK 74
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
TG +D Y +S+MDMY +LG++ +K+FDEMP + VV WN+ + +V+C R +AV +
Sbjct: 75 TGFRWDAYTASSLMDMYTMLGRLEAARKVFDEMPQRAVVVWNMMLRCYVRCGRNTEAVAL 134
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
M +G L PD T+++ L+AC+ +L LG++IH Y++ F+ + NALLDMY K
Sbjct: 135 AEEMERG-RLTPDRVTLLTALTACSRAGDLSLGRKIHAYMDGVTGFSLPVANALLDMYVK 193
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
GCL EA LF++MP++NV+ WT++VSGY GQ++KAR LF + +D+++WTAMIN Y
Sbjct: 194 NGCLEEAVNLFEKMPSRNVVSWTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINAY 253
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ F EA++LFR+MQ+ +++PD+F +V LLT CA LGAL+QG+ IH + + +DA
Sbjct: 254 VQHGCFIEALSLFRDMQMHQIEPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDA 313
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ TALI+MYAKCG +EK++E+F + +D +WT+IICGLA NG+ +ALELF M
Sbjct: 314 VLGTALIDMYAKCGHVEKSVEVFERMEGRDTKAWTAIICGLATNGQAGRALELFEDMERS 373
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
AKPD +TFIGVLSAC HGGLVDEGR+ F M EVY+I+P++EHY CL++LLGRAG LDE
Sbjct: 374 EAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLDE 433
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
AE+LI+ IP N+ +PL+GAL++AC+ GNV M E+L + K + + L++N+
Sbjct: 434 AEKLIKSIP--INKDAMPLFGALITACKAQGNVKMSERLTKRIGKQGYQIPDVNLLMSNV 491
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
YA+A+RWEDV VR KM V+K GCS IE+ G
Sbjct: 492 YATASRWEDVVRVRSKMAHPSVKKNAGCSLIEVKG 526
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 177/376 (47%), Gaps = 46/376 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++ A + G + + T + LM T G L A K+F + ++ +N++++ +
Sbjct: 66 RKAHAATLKTGFRWDAYTASSLMDMYTML--GRLEAARKVFDEMPQRAVVVWNMMLRCYV 123
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK-TGLEFDT 123
+ G +++ L ++ ++PD T A G++ G K+H Y+ TG F
Sbjct: 124 RCGRNTEAVALAEEMERGRLTPDRVTLLTALTACSRAGDLSLGRKIHAYMDGVTG--FSL 181
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV-------------KCMR- 169
V N+++DMY G + LF++MP ++VVSW +SG+ +C
Sbjct: 182 PVANALLDMYVKNGCLEEAVNLFEKMPSRNVVSWTTLVSGYAFAGQVDKARLLFHQCTEK 241
Query: 170 -----------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
F +A+ +FR M Q + PD TVV+ L+ C L L+ G+ I
Sbjct: 242 DLIMWTAMINAYVQHGCFIEALSLFRDM-QMHQIEPDRFTVVTLLTCCANLGALDQGQLI 300
Query: 213 HRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H++ + ++ ++G AL+DMY KCG + ++ E+F+ M ++ WT+++ G GQ
Sbjct: 301 HQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVEVFERMEGRDTKAWTAIICGLATNGQA 360
Query: 272 EKARDLF---DRSPVR-DIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKP---DKFI 323
+A +LF +RS + D V + +++ DE FR M ++ R++P
Sbjct: 361 GRALELFEDMERSEAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRVEHYSC 420
Query: 324 LVALLTGCAQLGALEQ 339
LV LL QL E+
Sbjct: 421 LVNLLGRAGQLDEAEK 436
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 131/286 (45%), Gaps = 12/286 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +F L+ + +I A+ + G F ++L LF ++ + PD FT +
Sbjct: 226 GQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQIEPDRFTVVTLL 285
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
LG + +G+ +H + ++ D + +++DMY G + ++F+ M +D
Sbjct: 286 TCCANLGALDQGQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVEVFERMEGRDTK 345
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G + A+++F M + PD T + LSAC ++ G++ R
Sbjct: 346 AWTAIICGLATNGQAGRALELFEDMERS-EAKPDSVTFIGVLSACCHGGLVDEGRKQFRA 404
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVI-CWTSMVSGYVNCGQL 271
+ + P + + L+++ + G L EA +L +P NK+ + + ++++ G +
Sbjct: 405 MKEVYRIRPRVEHYSCLVNLLGRAGQLDEAEKLIKSIPINKDAMPLFGALITACKAQGNV 464
Query: 272 EKARDLFDR-----SPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
+ + L R + D+ L M N Y +R+++ V + +M
Sbjct: 465 KMSERLTKRIGKQGYQIPDVNLL--MSNVYATASRWEDVVRVRSKM 508
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/602 (42%), Positives = 398/602 (66%), Gaps = 6/602 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M ++K+I AQ+ GL + L++L+ FC NL Y +KI + + + ++N+ I
Sbjct: 67 MAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAI 126
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ + + + ++LL+ + +G + PDN+TYP +FK ++ G+V++ G
Sbjct: 127 RGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGF 186
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ D +V N+I+ + G++ +KLFDE +D+VSWN I+G+V+C ++A D++ +
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYK 246
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
M + N+MPDE T++ +SA L+NL LG+++H+ I + L T + NAL+DMY KC
Sbjct: 247 MGE-LNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCK 305
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A+ LF+ M K V+ WT+MV GY G LE A LF+ P +D+VLW A+I G+VQ
Sbjct: 306 NIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQ 365
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
R EA+ALF EMQ + PDK +V L+ C+QLGAL+ G W+H Y++++ +T++ +
Sbjct: 366 AKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVAL 425
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TAL++MYAKCG I+KA+++F E+ +++ +WT+IICGLA++G+ + A+ FS+MIS G
Sbjct: 426 GTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGL 485
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD+ITFIGVLSAC HGGLVD+GR +F MT Y I PKL+HY CL+DLLGRAG L+EAE
Sbjct: 486 VPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAE 545
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
ELIR +P E + ++ +GAL RI+GNV MGE+ A+ L +++ D + LLAN+Y
Sbjct: 546 ELIRSMPFEPDAVV---WGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYG 602
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
AN WE VR+ M+E GV K PGCSSIE+NG++++F++ D SH + ++IY L R+ +
Sbjct: 603 DANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTR 662
Query: 599 TL 600
+
Sbjct: 663 QI 664
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/602 (42%), Positives = 397/602 (65%), Gaps = 6/602 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M ++K+I AQ+ GL + L++L+ FC NL Y +KI + + ++N+ I
Sbjct: 67 MAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAI 126
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ + + + ++LL+ + +G + PDN+TYP +FK ++ G+V++ G
Sbjct: 127 RGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGF 186
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ D +V N+I+ + G++ +KLFDE +D+VSWN I+G+V+C ++A D++ +
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYK 246
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
M + N+MPDE T++ +SA L+NL LG+++H+ I + L T + NAL+DMY KC
Sbjct: 247 MGE-LNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCK 305
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A+ LF+ M K V+ WT+MV GY G LE A LF+ P +D+VLW A+I G+VQ
Sbjct: 306 NIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQ 365
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
R EA+ALF EMQ + PDK +V L+ C+QLGAL+ G W+H Y++++ +T++ +
Sbjct: 366 AKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVAL 425
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TAL++MYAKCG I+KA+++F E+ +++ +WT+IICGLA++G+ + A+ FS+MIS G
Sbjct: 426 GTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGL 485
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD+ITFIGVLSAC HGGLVD+GR +F MT Y I PKL+HY CL+DLLGRAG L+EAE
Sbjct: 486 VPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAE 545
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
ELIR +P E + ++ +GAL RI+GNV MGE+ A+ L +++ D + LLAN+Y
Sbjct: 546 ELIRSMPFEPDAVV---WGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYG 602
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
AN WE VR+ M+E GV K PGCSSIE+NG++++F++ D SH + ++IY L R+ +
Sbjct: 603 DANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTR 662
Query: 599 TL 600
+
Sbjct: 663 QI 664
>gi|413943789|gb|AFW76438.1| hypothetical protein ZEAMMB73_890738 [Zea mays]
Length = 529
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/514 (48%), Positives = 361/514 (70%), Gaps = 4/514 (0%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N+LI+ A++GSF + + ++ LR RG++ D++TYPFV +A+G + +G KVH VK
Sbjct: 15 NVLIRTLARRGSFSRVMAVYYDLRARGLAADSYTYPFVLRAIGTMKLSVEGRKVHAAAVK 74
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
TG +D Y S+M+MY +LG+ + +++FDEMP + +V WN+ + +++C RF AV +
Sbjct: 75 TGFRWDAYTACSLMEMYTMLGRADSARRVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVAL 134
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
+M G PD T+V+ ++AC+ +L LG+ IH Y++ F+ + NALLDMY K
Sbjct: 135 AVQMESG-GATPDRVTLVTAVTACSRAGDLNLGRRIHSYMDGVFGFSLPVANALLDMYTK 193
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G L EA ++F++MP +N+I WT +VSGY GQL+KAR F + +D++LWT+MIN
Sbjct: 194 NGYLEEAVKMFEQMPERNIISWTILVSGYGIAGQLDKARVFFYQCTQKDLILWTSMINAC 253
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ F+EA+ LFR+MQ+ R++PDKF +V LLT CA +GAL+QG+WIH Y + +DA
Sbjct: 254 VQHGSFEEALILFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAESRNMKIDA 313
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ TALIEMY+KCG ++K+L+IF ++ KDAA+WT+IICGLA NG+ +KALELF +M
Sbjct: 314 VLGTALIEMYSKCGHVDKSLQIFGRMQGKDAAAWTAIICGLATNGQASKALELFEEMQRS 373
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KPD ITFIGVLSAC HGGLVDEG+R+F M EVY I+P++EHY CL++LLG AGLL E
Sbjct: 374 KTKPDGITFIGVLSACCHGGLVDEGQRYFQAMKEVYHIEPRIEHYSCLVNLLGHAGLLYE 433
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE-SKDSSFHTLLAN 535
AE+LI +P N+ + PL+GALL+AC+ GNV+M E L + K + S + + L++N
Sbjct: 434 AEKLITDMPVNNDTM--PLFGALLTACKANGNVEMSEWLTKRIAKEDCSPNPDVNVLMSN 491
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+YA+A+RWE+ VR KM V+K GCS IE+
Sbjct: 492 VYATASRWEEAIRVRSKMTNPAVKKTAGCSMIEV 525
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 169/369 (45%), Gaps = 67/369 (18%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ A + G + + T LM T + A ++F + L+ +N++++ +
Sbjct: 66 RKVHAAAVKTGFRWDAYTACSLMEMYTMLGRAD--SARRVFDEMPQRFLVLWNMMMRCYI 123
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G F ++ L ++ G +PD T A G++ G ++H Y+ F
Sbjct: 124 RCGRFTAAVALAVQMESGGATPDRVTLVTAVTACSRAGDLNLGRRIHSYMDGV-FGFSLP 182
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH-------------------- 164
V N+++DMY G + K+F++MP+++++SW + +SG+
Sbjct: 183 VANALLDMYTKNGYLEEAVKMFEQMPERNIISWTILVSGYGIAGQLDKARVFFYQCTQKD 242
Query: 165 -----------VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
V+ FE+A+ +FR M Q + PD+ TVV+ L+ C + L+ G+ IH
Sbjct: 243 LILWTSMINACVQHGSFEEALILFRDM-QLQRVEPDKFTVVTLLTCCANIGALDQGEWIH 301
Query: 214 RYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+Y ++ ++ ++G AL++MY KCG + ++ ++F M K+ WT+++ G GQ
Sbjct: 302 QYAESRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGKDAAAWTAIICGLATNGQAS 361
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
KA +LF+ EMQ + KPD + +L+ C
Sbjct: 362 KALELFE-------------------------------EMQRSKTKPDGITFIGVLSACC 390
Query: 333 QLGALEQGK 341
G +++G+
Sbjct: 391 HGGLVDEGQ 399
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 13/287 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A F L+ + +I A + GSF ++L+LF ++ + V PD FT +
Sbjct: 226 GQLDKARVFFYQCTQKDLILWTSMINACVQHGSFEEALILFRDMQLQRVEPDKFTVVTLL 285
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+G + +GE +H Y ++ D + ++++MY G + ++F M KD
Sbjct: 286 TCCANIGALDQGEWIHQYAESRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGKDAA 345
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G + A+++F M Q PD T + LSAC ++ G+ +
Sbjct: 346 AWTAIICGLATNGQASKALELFEEM-QRSKTKPDGITFIGVLSACCHGGLVDEGQRYFQA 404
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVNCGQL 271
+ + P + + L+++ G L EA +L +MP N + + ++++ G +
Sbjct: 405 MKEVYHIEPRIEHYSCLVNLLGHAGLLYEAEKLITDMPVNNDTMPLFGALLTACKANGNV 464
Query: 272 EKARDLFDR------SPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
E + L R SP D+ + M N Y +R++EA+ + +M
Sbjct: 465 EMSEWLTKRIAKEDCSPNPDVNV--LMSNVYATASRWEEAIRVRSKM 509
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/604 (41%), Positives = 394/604 (65%), Gaps = 5/604 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQI + ++GL +P +++ FC G ++YA ++F +I P L +N +I
Sbjct: 20 MYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMI 79
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K +++ + + ++ + + PD FT+PF+ K ++ G+ + + VK G +
Sbjct: 80 KGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFD 139
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ +V + + M+ + + +K+FD +VV+WN+ +SG+ + +F+ + +F M
Sbjct: 140 SNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEM 199
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDMYCKCGC 239
+ + P+ T+V LSAC+ LK+LE GK I++YIN + E I+ N L+DM+ CG
Sbjct: 200 EKR-GVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGE 258
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ EA+ +FD M N++VI WTS+V+G+ N GQ++ AR FD+ P RD V WTAMI+GY++
Sbjct: 259 MDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRM 318
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
NRF EA+ALFREMQ+ +KPD+F +V++LT CA LGALE G+W+ YI++N I D V
Sbjct: 319 NRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVG 378
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI+MY KCG + KA ++F E+ KD +WT++I GLA+NG +AL +FS MI
Sbjct: 379 NALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASIT 438
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD+IT+IGVL AC+H G+V++G+ FF +MT + I+P + HYGC++DLLGRAG L+EA E
Sbjct: 439 PDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHE 498
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+I +P + N I+ +G+LL ACR++ NV + E A + ++E ++ + + LL NIYA+
Sbjct: 499 VIVNMPVKPNSIV---WGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAA 555
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
RWE++ VR+ M E G++K PGCS +E+NG ++EF+ GD SH + KEIY+ L+ M +
Sbjct: 556 CKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQD 615
Query: 600 LLDS 603
L+ +
Sbjct: 616 LIKA 619
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/600 (44%), Positives = 378/600 (63%), Gaps = 13/600 (2%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
LKQ+ A + + GL +P + KL C S +L YA K+F I P L +N LI+A
Sbjct: 45 HLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRA 104
Query: 63 FAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
FA + LL+F + L E P+++T+PFV KA + + G+ +HG V+K
Sbjct: 105 FASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGS 164
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D ++ NS++ Y LG + + +F ++ +KD+VSWN ISG V+ E+A+ +F+RM+
Sbjct: 165 DLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMK 224
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
N P+ T+V LSAC +LE G+ YI + ++ I+ NA+LDMY KCG L
Sbjct: 225 ME-NARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSL 283
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR LFD+M K+++ WT+M+ GY G + AR +FD P DI W A+I+ Y Q
Sbjct: 284 EDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNG 343
Query: 301 RFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ EA+A+FRE+Q+ + KP++ L + L CAQLGA++ G WIH YI + I ++ +
Sbjct: 344 KPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHIT 403
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
T+LI+MY+KCG +EKALE+FY + +D W+++I GLAM+G A++LFS+M K
Sbjct: 404 TSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVK 463
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+ +TF +L ACSH GLVDEGR FFN M VY + P +HY C++D+LGRAG L+EA E
Sbjct: 464 PNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVE 523
Query: 480 LIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
LI K+P IVP ++GALL ACRIYGNV++ E + L + +S + + LL+NI
Sbjct: 524 LIEKMP------IVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNI 577
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YA A +W+ V+ +RQ MK G+ K PGCSSIE+NGIIHEFLVGD SH EIYS LD +
Sbjct: 578 YAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEI 637
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/601 (42%), Positives = 391/601 (65%), Gaps = 6/601 (0%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+QLKQIQAQ+ GL + ++L+ FC NL Y KI ++Q+P + ++N +I+
Sbjct: 67 SQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIR 126
Query: 62 AFAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + +K L+L+ ++ R G PDN+TY F+FK L G ++ G V+K G +
Sbjct: 127 GCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFD 186
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y+ N I+ M +G+ K+FDE +D+VSWN I+G+V+ + +A+ ++++M
Sbjct: 187 KDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQM 246
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGC 239
++ PDE T++ +SAC L++L+LG+EIHRYI + L + NAL+DMY KCG
Sbjct: 247 ITE-HVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGD 305
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L + LFD M K V+ WT+M+ GY G L+ A LF P +++V W AMI VQ
Sbjct: 306 LEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQA 365
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
N EA+ LFREMQ +KPDK ++ L+ C+QLGAL+ G W H YI ++ +++D +
Sbjct: 366 NLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALG 425
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TALI+MYAKCG + KAL++F E+ +++ +WT+II GLA+ G +N A+ FS+MI G
Sbjct: 426 TALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLM 485
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD+ITF+GVL+AC HGGLV+EGR++F+ M + + P+ +HY C+++LLGRAGLL+EAEE
Sbjct: 486 PDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEE 545
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI+ +P E + ++ +GAL AC I+ N+ +GE+ A+ L ++ DS + LLAN+Y
Sbjct: 546 LIKTMPMEADAMV---WGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYRE 602
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
A +WE+ N+R+ M E GV K PG SSIE+NGII+EF+V D SH + ++IY + + KT
Sbjct: 603 AGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQIYECFNLINKT 662
Query: 600 L 600
+
Sbjct: 663 I 663
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/607 (40%), Positives = 388/607 (63%), Gaps = 8/607 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQIQAQ+ GL +P ++L+ FC L Y+ KI I++P + ++N+ I
Sbjct: 66 LLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTI 125
Query: 61 KAFAKKGSFRKSLLLFSKLRERGV---SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+ F++ + ++S LL+ ++ G PD+FTYP +FK L G + G+V+K
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
LE ++V N+ + M+ G + N +K+FDE P +D+VSWN I+G+ K E A+ V+
Sbjct: 186 RLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY 245
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCK 236
+ M + + PD+ T++ +S+C+ L +L GKE + Y+ + L T + NAL+DM+ K
Sbjct: 246 KLM-ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSK 304
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG + EAR +FD + + ++ WT+M+SGY CG L+ +R LFD +D+VLW AMI G
Sbjct: 305 CGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ R +A+ALF+EMQ KPD+ ++ L+ C+QLGAL+ G WIH YI + ++++
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ T+L++MYAKCG I +AL +F+ ++ +++ ++T+II GLA++G + A+ F++MI
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD+ITFIG+LSAC HGG++ GR +F+ M + + P+L+HY ++DLLGRAGLL+E
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A+ L+ +P E + + +GALL CR++GNV++GEK A L +++ DS + LL +
Sbjct: 545 ADRLMESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGM 601
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
Y AN WED R+ M E GV K+PGCSSIE+NGI+ EF+V D S E ++IY L +
Sbjct: 602 YGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661
Query: 597 AKTLLDS 603
+ + S
Sbjct: 662 GRHMRSS 668
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/588 (41%), Positives = 386/588 (65%), Gaps = 21/588 (3%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
GL ++ ++L+ FC +L Y I + ++P ++N+ I+ F + R++++
Sbjct: 5 GLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVV 64
Query: 75 LFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
L+ + L+ G PDN+TYP +FKA L ++ G ++ G+V+ G + D +V N+++ +
Sbjct: 65 LYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLL 124
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
G + +K+FD+ +D+VSWN I+G+V+ +A++ +R M+ + PDE T+
Sbjct: 125 VSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVE-GIKPDEVTM 183
Query: 194 VSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
+ +S+C L++L+LG+E H YI + L+ T + NAL+DMY KCG L AR+LFD M N
Sbjct: 184 IGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTN 243
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K ++ WT+M LFD P +D+V W AMI GYV NR EA+ALF EM
Sbjct: 244 KTMVSWTTM---------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEM 288
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
Q + + PD+ +V+ L+ C+QLGAL+ G WIH YI ++ ++++ + TALI+MYAKCG I
Sbjct: 289 QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKI 348
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
KA+++F EL +++ +WT+II GLA++G + A+ FS+MI PD++TF+G+LSAC
Sbjct: 349 TKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSAC 408
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
HGGLV+EGR++F+ M+ + + PKL+HY C++DLLGRAGLL+EAEELI+ +P E + ++
Sbjct: 409 CHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVV 468
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+GAL ACRI+GNV MGE+ A+ L +++ DS + LLAN+Y A W++ R+
Sbjct: 469 ---WGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKL 525
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
M++ GV K PGCSSIE+NGI++EF+V D SH + ++IY L ++ + L
Sbjct: 526 MRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQL 573
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/604 (41%), Positives = 390/604 (64%), Gaps = 7/604 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M ++ QI +Q + GL N L K+++FC G++ YA K+F I P + +N +I
Sbjct: 48 MYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMI 107
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-L 119
K +++ + L+ + + PD FT+PF+ K +K G+ + + V G L
Sbjct: 108 KGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFL 167
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ + +V + ++ + G + +K+FD +VV+WNV +SG+ + R+E++ +F
Sbjct: 168 DSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIE 227
Query: 180 MRQGCN-LMPDEGTVVSTLSACTALKNLELGKEIH-RYINQEL-EFTPIMGNALLDMYCK 236
M + C + P+ T+V LSAC+ LK+L GK I+ +YI + + E I+ NAL+DM+
Sbjct: 228 MEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFAS 287
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG + AR +FDEM ++VI WTS+V+G+ N +++ AR FD+ P RD V WTAMI+GY
Sbjct: 288 CGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGY 347
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
++ NRF E + LFR+MQ+ +KPD+F +V++LT CA LGALE G+W YI++N+I D
Sbjct: 348 LRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDT 407
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ ALI+MY KCG +EKA +IF E+++KD +WT++I GLA NG +AL +FS M+
Sbjct: 408 FIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEA 467
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
PD+IT+IGV+ AC+H GLV +G+ FF+ M + I+P L HYGC++DLLGRAG L E
Sbjct: 468 SVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKE 527
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A E+I +P + N I+ +G+LL ACR++ NV + E A + ++E ++ + + LL NI
Sbjct: 528 ALEVIMNMPVKPNSIV---WGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNI 584
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YA+ +W+++ NVR+ M E G++K+PGCS +E+NGI++EF+ GD SH + KEIY+ L+ M
Sbjct: 585 YAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENM 644
Query: 597 AKTL 600
+ L
Sbjct: 645 KQDL 648
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/604 (41%), Positives = 387/604 (64%), Gaps = 10/604 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQIQAQ+ GL +N ++L+ FC L Y +I I+ + ++N I
Sbjct: 70 LVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAI 129
Query: 61 KAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKK--GEKVHGYVVKT 117
+ + + G +L+ ++ G + PDN TYP + K G G+ G V G+V+K
Sbjct: 130 RGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLK--GCCGQYSSCLGLGVLGHVLKF 187
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G E D +V N+ + M G++ +F++ +D+V+WN I+G VK +A+ ++
Sbjct: 188 GFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIY 247
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCK 236
+ M + + P+E T++ +S+C+ +++L LGKE H YI + LEFT + NAL+DMY K
Sbjct: 248 KEM-EAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVK 306
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG L AR LFD M K ++ WT+MV GY G L+ AR++ + P + +V W A+I+G
Sbjct: 307 CGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGC 366
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ + EA+ALF EMQI ++PDK +V L+ C+QLGAL+ G WIH YI +++++D
Sbjct: 367 VQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDV 426
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ TAL++MYAKCG I +AL++F E+ +++ +WT++ICGLA++G AL FS+MI
Sbjct: 427 ALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHI 486
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD+ITF+GVLSAC HGGLV+EGR++F+ M+ + + PKL+HY C++DLLGRAG L+E
Sbjct: 487 GIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEE 546
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
AEEL++ +P + ++ GAL ACR+YGNV +GE+ A L +I+ +DS + LLA++
Sbjct: 547 AEELVKNMPMAADAAVL---GALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASM 603
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
Y+ A W++ + R+ M + GV K PGCS +EINGI+HEF+V D SH + + IY L +
Sbjct: 604 YSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTL 663
Query: 597 AKTL 600
K L
Sbjct: 664 TKQL 667
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/602 (41%), Positives = 369/602 (61%), Gaps = 40/602 (6%)
Query: 4 LKQIQAQIFQIGLQQNPETL--NKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
LKQI A I + + + +L C + YA + +++P L YN +I+
Sbjct: 38 LKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIR 97
Query: 62 AFAKKGSFR-KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A + + L+++ ++ +G+ PDN+T PFV KA V++GE+VHG +K GL
Sbjct: 98 GLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLA 157
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D YV N++M MY V I + +K+FD P +D+VSW I G+VK + V +F M
Sbjct: 158 SDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEM 217
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCG 238
G NL D T+V LS+C L +L LG+++HRYI N + +GNAL+DMY K
Sbjct: 218 -CGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLK-- 274
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
CG AR +F PV+++V W +MI+G Q
Sbjct: 275 -----------------------------CGDANFARKVFQEMPVKNVVSWNSMISGLAQ 305
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+F E++ +FR+MQ + +KPD LVA+L CA LG LE GKW+H Y++ N+I D +
Sbjct: 306 KGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFI 365
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
AL++MYAKCG I++A +F + KD S+T++I GLAM+G+ KAL+LFS+M G
Sbjct: 366 GNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGI 425
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PD++TF+GVL+ACSH GLV+EGR++F M+ +Y ++P+LEHYGC++DLLGRAGL++EAE
Sbjct: 426 EPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAE 485
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E IR +P E + ++ GALL AC+I+G V++GE + +EKIE + + L++NIY+
Sbjct: 486 EFIRNMPIEPDAFVL---GALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYS 542
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
SANRW D +R+ MKE + K PGCSSIE++G+IHEF GD SH ++KEIY +LD +
Sbjct: 543 SANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMS 602
Query: 599 TL 600
L
Sbjct: 603 HL 604
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/601 (41%), Positives = 371/601 (61%), Gaps = 38/601 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M+QLKQI AQ+ + GL +P T +K++ FC+ G+L YA +F I +P N +I
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ K +++LL + ++ +G+ PD +T+P +FK+ E G+++H + K G
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFA 117
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
DTY N++M+MY G + + +K+FD+M DK VVSW I H + + +AV +F RM
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGC 239
+ N+ P+E T+V+ L+AC ++L + K IH YI++ ++ L+D+YCKCG
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCG- 236
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
C QL ARDLFD++ +++ W MING+V+
Sbjct: 237 ----------------------------CVQL--ARDLFDKAQEKNLFSWNIMINGHVED 266
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ ++EA+ LFREMQ +K DK + +LL C LGALE GKW+H YI + RI VD +
Sbjct: 267 SNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALG 326
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TAL++MYAKCG IE A+++F+E+ EKD +WT++I GLAM G+ AL+ F +M G K
Sbjct: 327 TALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVK 386
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD ITF+GVL+ACSH G VDEG FN+M++ Y IQP +EHYG L+D+LGRAG + EAEE
Sbjct: 387 PDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEE 446
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI+ +P ++ ++ G LL ACRI+GN++ E+ A L +I+ S + LL+NIY S
Sbjct: 447 LIKSMPMAPDQFVL---GGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKS 503
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
+ +WE+ R+ M E G+RK PGCS IE++G++HEF+ GD SH + EI ML+ M
Sbjct: 504 SKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISK 563
Query: 600 L 600
L
Sbjct: 564 L 564
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/601 (41%), Positives = 383/601 (63%), Gaps = 7/601 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
QLKQI AQ+ + GL +P + ++L+ +L YA+++F I P L +N LI+A
Sbjct: 50 QLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRA 109
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A + +SLL+F ++ + PD FT+PF+ KA L E+ G+ HG V+K L
Sbjct: 110 YASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D ++ NS++ Y G++ ++F +P +DVVSWN I+ V+ E+A+++F+ M
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCL 240
N+ P+ T+V LSAC + E G+ +H YI + + + + NA+LDMY KCG +
Sbjct: 230 TQ-NVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSV 288
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+A+ LFD+MP K+++ WT+M+ GY G+ + A+ +FD P +DI W A+I+ Y Q
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCG 348
Query: 301 RFDEAVALFREMQIIRL-KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ EA+ LF E+Q+ + KPD+ LV+ L+ CAQLGA++ G WIH YI + + ++ +
Sbjct: 349 KPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLT 408
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
T+LI+MY KCG ++KAL +F+ + KD W+++I GLAM+G A+ LFS+M K
Sbjct: 409 TSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVK 468
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+ +TF +L ACSH GLV+EGR FFN M VY + P ++HY C++D+LGRAGLL+EA E
Sbjct: 469 PNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVE 528
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI K+P ++GALL AC I+ NV + E+ + L ++E + + LL+NIYA
Sbjct: 529 LIEKMPMAP---AASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAK 585
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
A +W+ V+ +R+ M+++G++K PGCSSIE++GI+HEFLVGD SH K+IY+ LD +
Sbjct: 586 AGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVAR 645
Query: 600 L 600
L
Sbjct: 646 L 646
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 213/456 (46%), Gaps = 74/456 (16%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVS 160
E K+ +++H +++TGL FD + + ++ + + +++FD++P ++ +WN
Sbjct: 47 ETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTL 106
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I + ++ +F RM PD+ T + A + L+ L GK H + + L
Sbjct: 107 IRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVL 166
Query: 221 EFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ + + N+L+ Y KCG L +F +P ++V+ W SM++ +V G E
Sbjct: 167 LGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPE------- 219
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
EA+ LF+EM+ +KP+ +V +L+ CA+ E
Sbjct: 220 ------------------------EALELFQEMETQNVKPNGITMVGVLSACAKKSDFEF 255
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA- 398
G+W+H YI NRI ++ A+++MY KCG +E A +F ++ EKD SWT+++ G A
Sbjct: 256 GRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAK 315
Query: 399 ------------------------------MNGKINKALELFSQM-ISGGAKPDDITFIG 427
GK +ALELF ++ +S AKPD++T +
Sbjct: 316 IGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVS 375
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
LSAC+ G +D G + + + ++ LID+ + G L +A + + E
Sbjct: 376 TLSACAQLGAMDLG-GWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSV--E 432
Query: 488 NNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++ V + A+++ ++G+ G+ AL K++
Sbjct: 433 RKDVFV--WSAMIAGLAMHGH---GKDAIALFSKMQ 463
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/610 (41%), Positives = 374/610 (61%), Gaps = 30/610 (4%)
Query: 6 QIQAQIFQIGLQQNPETL-----------NKLMVFCTHPSHGNLLYAEKIFGSIQSPCLL 54
QI A + GL Q+ +L + PS L +A + S+ +
Sbjct: 28 QIHAHLLAAGLLQDFSSLLAAAYALSTTATATDARTSPPS--PLRHALALLSSLPAS--- 82
Query: 55 AYNLLIKAFA--------KKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVK 105
AYN I+A + G R+ L L+ L G + PD+ T+PF+ KA L E
Sbjct: 83 AYNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWG 142
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
G+ +V++ GL+ D +V N+ + G + + ++LFD P +D+VSWN I G+V
Sbjct: 143 YGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYV 202
Query: 166 KCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFT 223
+ +A+++F RM + + PDE T+++ +S C +++LELG+ +H +++ + + T
Sbjct: 203 RRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCT 262
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ NAL+DMY KCG L A+ +F+ + ++ V+ WT+M+ G+ G ++ AR +FD P
Sbjct: 263 VRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPE 322
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
RD+ W A++ GYVQ + EA++LF EMQ + PD+ +V LLT C+QLGALE G W+
Sbjct: 323 RDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWV 382
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H YI ++R+ + T+LI+MYAKCG IEKA+ IF E+ EK+A +WT++ICGLA +G
Sbjct: 383 HRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHA 442
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
N+A+E F MI G KPD+ITFIGVLSAC H GLV EGR FF+ M Y ++ K++HY C
Sbjct: 443 NEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSC 502
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
+IDLLGRAG LDEAE+L+ +P E + ++ +GA+ ACR+ GN+ +GEK A L +I+
Sbjct: 503 MIDLLGRAGHLDEAEQLVNTMPMEPDAVV---WGAIFFACRMQGNISLGEKAAMKLVEID 559
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
DS + LLAN+YA AN + VR M+ +GV KVPGCS IE+NG++HEF+V D SH
Sbjct: 560 PSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSH 619
Query: 584 SEMKEIYSML 593
+ IY L
Sbjct: 620 MDSHAIYDCL 629
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/601 (40%), Positives = 375/601 (62%), Gaps = 39/601 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M+QLKQI AQ+ + L +P + +K++ FC G+L YA +F I +P N +I
Sbjct: 53 MSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSII 112
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + K R+++L + + +G+ PD FT+P +FK+ G L E G+++H + K G
Sbjct: 113 RGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFA 169
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y+ N++M+MY G + + +K+FD+M +K VVSW I + + +A+ +FRRM
Sbjct: 170 SDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRM 229
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGC 239
++ P+E T+V+ L+AC ++LE K++H+YI++ + F ++ +AL+D+YCKCGC
Sbjct: 230 EIA-SVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGC 288
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
ARDLF++ P +++ W MING+V+
Sbjct: 289 YP-------------------------------LARDLFNKMPEKNLFCWNIMINGHVED 317
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ ++EA++LF EMQ+ +K DK + +LL C LGALE GKW+H YI + +I VD +
Sbjct: 318 SDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALG 377
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TAL++MYAKCG IE A+ +F E+ EKD +WT++I GLAM G+ KALELF +M K
Sbjct: 378 TALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVK 437
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD ITF+GVL+ACSH GLV+EG +FN+M Y IQP +EHYGC++D+LGRAG + EAE+
Sbjct: 438 PDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAED 497
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI+ +P + + L G LLSACRI+GN+ + E+ A L +++ K+ + LL+NIY+S
Sbjct: 498 LIQNMPMAPDYFV--LVG-LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSS 554
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
WE +R+ M E ++K PGCS+IE+ G++HEF+ GD SH + EIY LD M +
Sbjct: 555 MKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRR 614
Query: 600 L 600
L
Sbjct: 615 L 615
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/630 (40%), Positives = 384/630 (60%), Gaps = 68/630 (10%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LKQI +QI + GL L+KL+ FC GNL YA +F SI+ P +N +I+
Sbjct: 48 LKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ S ++ + ++ GV P+++T+PF+ K+ +G ++G+++HG+V+K GLE D
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167
Query: 124 YVCNSIMDMYGVLGKI-----------------------------C--NVKKLFDEMPDK 152
+V S+++MY G++ C + ++LF+E+P +
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
D VSWN I+G+ + RFE+A+ F+ M++ N+ P+E T+V+ LSAC +LELG +
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRA-NVAPNESTMVTVLSACAQSGSLELGNWV 286
Query: 213 HRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
+I + L + NAL+DMY KCG L
Sbjct: 287 RSWIEDHGLGSNLRLVNALIDMYSKCG-------------------------------DL 315
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+KARDLF+ +DI+ W MI GY N + EA+ALFR+MQ ++P+ V++L C
Sbjct: 316 DKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPAC 375
Query: 332 AQLGALEQGKWIHGYINENRITV-DAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
A LGAL+ GKWIH YI++ + + + + T+LI+MYAKCG IE A ++F ++ K SW
Sbjct: 376 AYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW 435
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I GLAM+G N ALELF QM G +PDDITF+GVLSACSH GLV+ GR+ F++M E
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE 495
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
Y I PKL+HYGC+IDLLGRAGL DEAE L++ + + + I +G+LL ACR++GNV+
Sbjct: 496 DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAI---WGSLLGACRVHGNVE 552
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+GE A L ++E ++ + LL+NIYA+A RW+DV +R K+ + G++KVPGCSSIE++
Sbjct: 553 LGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVD 612
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++HEFLVGD H + ++IY MLD + + L
Sbjct: 613 SVVHEFLVGDKVHEQSQDIYKMLDEIDQLL 642
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 187/392 (47%), Gaps = 29/392 (7%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+++ I GL N +N L+ + G+L A +F I ++++N++I ++
Sbjct: 286 VRSWIEDHGLGSNLRLVNALIDM--YSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF-DTYV 125
S++++L LF K+++ V P++ T+ + A +LG + G+ +H Y+ K L +T +
Sbjct: 344 NSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
S++DMY G I K++F M K + SWN ISG A+++FR+MR
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDE-G 462
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEA 243
PD+ T V LSAC+ +ELG++ + ++ + +P + + ++D+ + G EA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 244 RELFDEMPNK-NVICWTSM-----VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
L M K + W S+ V G V G+ A+ LF+ P + + + N Y
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEF-AAKHLFELEP-ENPGAYVLLSNIYA 580
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
R+D+ + ++ +K + GC+ ++E +H ++ +++ +
Sbjct: 581 TAGRWDDVARIRTKLNDKGMKK--------VPGCS---SIEVDSVVHEFLVGDKVHEQSQ 629
Query: 358 VATALI----EMYAKCGLIEKALEIFYELREK 385
++ ++ K G + E+ Y++ E+
Sbjct: 630 DIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEE 661
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/601 (41%), Positives = 374/601 (62%), Gaps = 7/601 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
QLK++ A++ + GL +P + +KL S L YA +F I P L +N LI+A
Sbjct: 40 QLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRA 99
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A +S ++F L ++ P+ FT+PFV KA L + G VHG +K
Sbjct: 100 YASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGM 159
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D Y+ NS++ YG G + ++LF + KDVVSWN IS + EDA+++F +M
Sbjct: 160 DLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKME 219
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+ N+MP+ T+V LSAC +LE G+ + YI ++ ++ + NA+LDMY KCG +
Sbjct: 220 RE-NVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSV 278
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+A++LFDEMP ++V WT M+ GY G + AR +F+ PV++I W +I+ Y Q
Sbjct: 279 DDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNG 338
Query: 301 RFDEAVALFREMQIIRL-KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ EA+A+F E+Q+ ++ KPD+ LV+ L+ CAQLGA++ G WIH YI I ++ +
Sbjct: 339 KPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLI 398
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
++L++MYAKCG +EKALE+FY + E+D W+++I GL M+G+ A++LF +M K
Sbjct: 399 SSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVK 458
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+ +TF VL ACSH GLVDEGR FF+ M VY + P+++HY C++D+LGRAG L+EA E
Sbjct: 459 PNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAME 518
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI ++ + ++GALL AC ++ NV++GE + L K+E ++ LL+NIYA
Sbjct: 519 LINEMSTTPS---ASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAK 575
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
RWE V+ +R+ M++ ++K PGCSSIE NG +HEFLVGD +H IYS L+ +A
Sbjct: 576 TGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATK 635
Query: 600 L 600
L
Sbjct: 636 L 636
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 196/438 (44%), Gaps = 71/438 (16%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSIS 162
K+ ++VH +++TGL FD + + + + + + LFD++P ++ +WN I
Sbjct: 39 KQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIR 98
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELE 221
+ + +F + C +P++ T + A + LK +G +H I
Sbjct: 99 AYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFG 158
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ N+L+ Y CG LS A LF + K+V+ W SM+S
Sbjct: 159 MDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMIS------------------ 200
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
+ Q N ++A+ LF +M+ + P+ +V +L+ CA+ LE G+
Sbjct: 201 -------------AFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGR 247
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA--- 398
W+ YI I VD + A+++MY KCG ++ A ++F E+ E+D SWT ++ G A
Sbjct: 248 WVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMG 307
Query: 399 ----------------------------MNGKINKALELFSQM-ISGGAKPDDITFIGVL 429
NGK +AL +F+++ +S AKPD++T + L
Sbjct: 308 DYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTL 367
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
SAC+ G +D G + + + I L+D+ + G L++A E+ + +
Sbjct: 368 SACAQLGAIDLG-GWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERD- 425
Query: 490 EIIVPLYGALLSACRIYG 507
V ++ A+++ ++G
Sbjct: 426 ---VYVWSAMIAGLGMHG 440
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/565 (42%), Positives = 360/565 (63%), Gaps = 12/565 (2%)
Query: 38 LLYAEKIFGSIQSP--CLLAYNLLIKAFA----KKGSFRKSLLLFSKLRERGVS-PDNFT 90
LL+A I S+ SP YN +A + + R L L+ L G + PD+ T
Sbjct: 64 LLHALAILASLPSPPDSAFPYNAAFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLT 123
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
+PF+ KA L G V G+V K G D +V N+ M + V G + ++LFDE P
Sbjct: 124 FPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESP 183
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN-LMPDEGTVVSTLSACTALKNLELG 209
+DVVSWN I G+V+ +A+++F R+ + N + PDE TV+ +S C + +LELG
Sbjct: 184 VRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELG 243
Query: 210 KEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
K +H ++ N+ + T + NA++DMY KCG L A +F+ + N+ + WT+M+ G+
Sbjct: 244 KRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARL 303
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G +E AR LFD P RD+ W A++ GYVQ + EA+ALF EMQ ++ P++ +V LL
Sbjct: 304 GMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLL 363
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+ C+QLGALE G W+H YI+ +++ + + T+L++MYAKCG I+KA+ +F E+ ++A
Sbjct: 364 SACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNAL 423
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+WTS+ICGLA +G ++A+E F +MI G +PD+ITFIGVLSAC H GLV+ GR+FF+ M
Sbjct: 424 TWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLM 483
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
Y ++ K++HY C+IDLLGRAG LDEAE+L+ +P + + ++ +GAL ACR++GN
Sbjct: 484 HAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVV---WGALFFACRMHGN 540
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+ +GEK A L +++ DS + LLAN+YA AN + VR M+ +GV KVPGCS IE
Sbjct: 541 ITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIE 600
Query: 569 INGIIHEFLVGDPSHSEMKEIYSML 593
+NG++HEF+V D SH + IY L
Sbjct: 601 LNGVVHEFIVKDKSHLDTNAIYDCL 625
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 137/294 (46%), Gaps = 14/294 (4%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H G + A +F + + +N L+ + + ++++ LF ++++ V P+ T
Sbjct: 300 HARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITM 359
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ A LG ++ G VH Y+ + L + S++DMY G I +F+E+P
Sbjct: 360 VNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPV 419
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
++ ++W I G ++A++ F+RM L PDE T + LSAC +E G++
Sbjct: 420 QNALTWTSMICGLANHGHADEAIEYFQRMID-LGLQPDEITFIGVLSACCHAGLVEAGRQ 478
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSM-----VS 263
++ + M + ++D+ + G L EA +L + MP + + + W ++ +
Sbjct: 479 FFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMH 538
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN---RFDEAVALFREMQI 314
G + G+ + A L + P D ++ + N Y + N + D+ + R + +
Sbjct: 539 GNITLGE-KAAMKLVELDP-SDSGIYVLLANMYAEANMRKKADKVRVMMRHLGV 590
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/582 (41%), Positives = 376/582 (64%), Gaps = 10/582 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQIQAQ+ GL +N ++L+ FC L Y +I I+ + ++N I
Sbjct: 70 LVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAI 129
Query: 61 KAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKK--GEKVHGYVVKT 117
+ + + G +L+ ++ G + PDN TYP + K G G+ G V G+V+K
Sbjct: 130 RGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLK--GCCGQYSSCLGLGVLGHVLKF 187
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G E D +V N+ + M G++ +F++ +D+V+WN I+G VK +A+ ++
Sbjct: 188 GFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIY 247
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCK 236
+ M + + P+E T++ +S+C+ +++L LGKE H YI + LEFT + NAL+DMY K
Sbjct: 248 KEM-EAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVK 306
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG L AR LFD M K ++ WT+MV GY G L+ AR++ + P + +V W A+I+G
Sbjct: 307 CGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGC 366
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ + EA+ALF EMQI ++PDK +V L+ C+QLGAL+ G WIH YI +++++D
Sbjct: 367 VQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDV 426
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ TAL++MYAKCG I +AL++F E+ +++ +WT++ICGLA++G AL FS+MI
Sbjct: 427 ALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHI 486
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD+ITF+GVLSAC HGGLV+EGR++F+ M+ + + PKL+HY C++DLLGRAG L+E
Sbjct: 487 GIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEE 546
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
AEEL++ +P + ++ GAL ACR+YGNV +GE+ A L +I+ +DS + LLA++
Sbjct: 547 AEELVKNMPMAADAAVL---GALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASM 603
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
Y+ A W++ + R+ M + GV K PGCS +EINGI+HEF++
Sbjct: 604 YSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVL 645
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/565 (43%), Positives = 362/565 (64%), Gaps = 12/565 (2%)
Query: 38 LLYAEKIFGSIQSPCLLA--YNLLIKAFA----KKGSFRKSLLLFSKLR-ERGVSPDNFT 90
LL+A I S+ SP A YN +A + + R L L+ L PD+ T
Sbjct: 64 LLHALAILASLPSPPDSASPYNAAFRALSLCPHRHLVDRHCLPLYRALLCSSSARPDHLT 123
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
+PF+ KA L G V G+V K G D +V N+ + + V G + ++LFDE P
Sbjct: 124 FPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLFDESP 183
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELG 209
+DVVSWN I G+V+ +A+++F R+ G + PDE T++ +S C + +LELG
Sbjct: 184 ARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELG 243
Query: 210 KEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
K +H +++ + + T + NA++DMY KCG L A+ +F+ + NK V+ WT+M+ G+
Sbjct: 244 KRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARL 303
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G +E AR LFD P RD+ W A++ GYVQ + EA+ALF EMQ ++ P++ +V LL
Sbjct: 304 GMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLL 363
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+ C+QLGALE G W+H YI+ +++ + + T+L++MYAKCG I+KA+ IF E+ +K+A
Sbjct: 364 SACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNAL 423
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+WT++ICGLA +G ++A+E F +MI G +PD+ITFIGVLSAC H GLV EGR+FF+ M
Sbjct: 424 TWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLM 483
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
E Y ++ K++HY C+IDLLGRAG LDEAE+L+ +P + + ++ +GAL ACR++GN
Sbjct: 484 HEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVV---WGALFFACRMHGN 540
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+ +GEK A L +++ DS + LLAN+YA AN + VR M+ +GV KVPGCS IE
Sbjct: 541 ITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIE 600
Query: 569 INGIIHEFLVGDPSHSEMKEIYSML 593
+NG++HEF+V D SH + IY L
Sbjct: 601 LNGVVHEFIVKDKSHLDTIAIYDCL 625
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 155/337 (45%), Gaps = 28/337 (8%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H G + A +F + + +N L+ + + ++++ LF +++E V P+ T
Sbjct: 300 HARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITM 359
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ A LG ++ G VH Y+ + L + S++DMY G I +F E+PD
Sbjct: 360 VNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPD 419
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K+ ++W I G ++A++ F+RM L PDE T + LSAC ++ G++
Sbjct: 420 KNALTWTAMICGLANHGHADEAIEYFQRMID-LGLQPDEITFIGVLSACCHAGLVKEGRQ 478
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSM-----VS 263
++++ M + ++D+ + G L EA +L + MP + + + W ++ +
Sbjct: 479 FFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMH 538
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN---RFDEAVALFREMQIIRLKPD 320
G + G+ + A L + P D ++ + N Y + N + D+ + R + + ++
Sbjct: 539 GNITLGE-KAAMKLVELDP-SDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVP-- 594
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
GC+ +E +H +I +++ +D +
Sbjct: 595 ---------GCS---CIELNGVVHEFIVKDKSHLDTI 619
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/607 (40%), Positives = 373/607 (61%), Gaps = 34/607 (5%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQI A I + TH H L F S SP +N +I
Sbjct: 56 LEQTKQIHAHIIK-----------------THFHHA-LQIPLNDFPSGLSPSA-QWNFVI 96
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
++ K+ R +L ++++LR+ DNF P V KA G + + G+++HG+V+K GL+
Sbjct: 97 TSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLD 156
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V N++M MYG + + +FD+M ++DVVSW+ I + F+ A+++ R M
Sbjct: 157 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 216
Query: 181 RQGCNLM---PDEGTVVSTLSACTALKNLELGKEIHRYI----NQELEFTPIMGNALLDM 233
N M P E +VS ++ N+ +GK +H Y+ N E P ALLDM
Sbjct: 217 ----NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTT-TALLDM 271
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG L AR+LF+ + K V+ WT+M++G + +LE+AR LFD + RD+++WTAM+
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+ Y Q N D+A LF +M+ ++P K +V+LL+ CA GAL+ GKW+H YI++ R+
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
VD ++ TAL++MYAKCG I A +F E +D W +II G AM+G +AL++F++M
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G KP+DITFIG+L ACSH GLV EG++ F M + + P++EHYGC++DLLGRAGL
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 511
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
LDEA E+I+ +P + N I+ +GAL++ACR++ N +GE A L +IE ++ ++ L+
Sbjct: 512 LDEAHEMIKSMPIKPNTIV---WGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLM 568
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA+ANRW D VR+ MK +G++K PG S IE+NG +HEFL+GD SH +++ I ML
Sbjct: 569 SNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEML 628
Query: 594 DRMAKTL 600
M + L
Sbjct: 629 AEMRRKL 635
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/598 (39%), Positives = 385/598 (64%), Gaps = 6/598 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q KQ+ +Q G+ NP KL VF G++ YA K+F I P ++ +N +IK
Sbjct: 49 QFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 108
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG-EVKKGEKVHGYVVKTGLEF 121
++K + + L+ + + GV+PD+ T+PF+ + G + G+K+H +VVK GL
Sbjct: 109 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 168
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ YV N+++ MY + G + + +FD +DV SWN+ ISG+ + +E+++++ M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCL 240
+ + P T++ LSAC+ +K+ +L K +H Y+++ + E + + NAL++ Y CG +
Sbjct: 229 RNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
A +F M ++VI WTS+V GYV G L+ AR FD+ PVRD + WT MI+GY++
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
F+E++ +FREMQ + PD+F +V++LT CA LG+LE G+WI YI++N+I D VV
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MY KCG EKA ++F+++ ++D +WT+++ GLA NG+ +A+++F QM +P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDIT++GVLSAC+H G+VD+ R+FF M ++I+P L HYGC++D+LGRAGL+ EA E+
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
+RK+P N I+ +GALL A R++ + M E A + ++E + + + LL NIYA
Sbjct: 528 LRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGC 584
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
RW+D+ VR+K+ ++ ++K PG S IE+NG HEF+ GD SH + +EIY L+ +A+
Sbjct: 585 KRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/598 (39%), Positives = 385/598 (64%), Gaps = 6/598 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q KQ+ +Q G+ NP KL VF G++ YA K+F I P ++ +N +IK
Sbjct: 49 QFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 108
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG-EVKKGEKVHGYVVKTGLEF 121
++K + + L+ + + GV+PD+ T+PF+ + G + G+K+H +VVK GL
Sbjct: 109 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 168
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ YV N+++ MY + G + + +FD +DV SWN+ ISG+ + +E+++++ M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCL 240
+ + P T++ LSAC+ +K+ +L K +H Y+++ + E + + NAL++ Y CG +
Sbjct: 229 RNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
A +F M ++VI WTS+V GYV G L+ AR FD+ PVRD + WT MI+GY++
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
F+E++ +FREMQ + PD+F +V++LT CA LG+LE G+WI YI++N+I D VV
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MY KCG EKA ++F+++ ++D +WT+++ GLA NG+ +A+++F QM +P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDIT++GVLSAC+H G+VD+ R+FF M ++I+P L HYGC++D+LGRAGL+ EA E+
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
+RK+P N I+ +GALL A R++ + M E A + ++E + + + LL NIYA
Sbjct: 528 LRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGC 584
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
RW+D+ VR+K+ ++ ++K PG S IE+NG HEF+ GD SH + +EIY L+ +A+
Sbjct: 585 KRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/604 (40%), Positives = 375/604 (62%), Gaps = 10/604 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
QLKQI AQ+ + +P ++L S L YA K+F I P L ++N+LI+A
Sbjct: 154 QLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRA 213
Query: 63 FAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A +S+L+F + L + P+ FT+P + KAV G+ VHG +KT
Sbjct: 214 LATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGD 273
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFD--EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++ Y G + +F+ E +KD+VSWN ++G V+ + A+D+F R
Sbjct: 274 DVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFER 333
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
MR + P+ T+VS +SAC NL LG+++ YI++ E+ + NA +DM+ KCG
Sbjct: 334 MRNE-GVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCG 392
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ AR LFD M ++V+ WT+++ GY + ARD+FD P +DI W +I+GY Q
Sbjct: 393 EVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQ 452
Query: 299 FNRFDEAVALFREMQIIR--LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
R EA+A+FRE+Q+ + +PD+ L++ L+ CAQLGA++ G+WIHGYI + RI ++
Sbjct: 453 SGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNR 512
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+AT+LI+MY+K G +EKA+E+F+ + KD W+++I GLAM+G+ A+ELF M
Sbjct: 513 NLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQET 572
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KP+ +TF +L ACSH GLVDEG+R F+ M VY + PK +HY C++D+LGRAG L+E
Sbjct: 573 QVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEE 632
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A + I +P + ++GALL AC I+GN+++ EK + L +IE + + LL+N+
Sbjct: 633 ALKFIEGMPLAPS---ASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNL 689
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YA WE V+ +RQ+M++ G++K GCSSIEI+G +HEF+VGD +H ++IY+ LD +
Sbjct: 690 YAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEI 749
Query: 597 AKTL 600
L
Sbjct: 750 MARL 753
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/542 (42%), Positives = 341/542 (62%), Gaps = 8/542 (1%)
Query: 56 YNLLIKAFA---KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
YN ++A + +G + L L+ L R PD+ T+PF+ KA L E G V G
Sbjct: 86 YNAALRALSLCTDRGLVTRCLPLYCSLL-RSARPDHLTFPFLLKACARLQERNYGNAVLG 144
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
V+ G D +V N+ M V + +KLFD +D+VSWN I G+V+ +
Sbjct: 145 NVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPRE 204
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALL 231
A+++F RM + PDE T++ +S L++LELG+ +H Y+ + T + N ++
Sbjct: 205 ALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVM 264
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
DMY KCG L A+ +F+ + K ++ WT+M+ GY G ++ AR +FD P RD+ W A
Sbjct: 265 DMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNA 324
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
++ GYVQ R EA+ LF +MQ ++PD +V LL+ C+QLGALE G W+H YI+ R
Sbjct: 325 LMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRR 384
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+++ ++ T L++MY+KCG IEKA+ +F E+ EK+A +WT++I GLA +G + A++ F
Sbjct: 385 VSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQ 444
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+MI G +PD+ITFIGVLSAC H GLV EG+ FF+ M Y ++ K++HY C++DLLGRA
Sbjct: 445 RMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRA 504
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G LDEAE L+ +P E + ++ +GAL ACR++GN+ +GEK A L +++ DS +
Sbjct: 505 GYLDEAEHLVNTMPMEPDAVV---WGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYV 561
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LLAN+YA AN + VR M+ +GV KVPGCS IE+NG++HEF+V D SH+++ IY
Sbjct: 562 LLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYD 621
Query: 592 ML 593
L
Sbjct: 622 CL 623
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/602 (40%), Positives = 352/602 (58%), Gaps = 77/602 (12%)
Query: 4 LKQIQAQIFQIGLQQNPETL--NKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
LKQI A I + + + +L C + YA + +++P L YN +I+
Sbjct: 53 LKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIR 112
Query: 62 AFAKKGSFR-KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A + + L+++ ++ +G+ PDN+T PFV KA V++GE+VHG +K GL
Sbjct: 113 GLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLA 172
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D YV N++M MY V I + +K+FD P +D+VSW I G+VK M F
Sbjct: 173 SDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVK-MGFA--------- 222
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCG 238
R+G L YI N + +GNAL+DMY KCG
Sbjct: 223 REGVGL----------------------------YIIRNSNVNLDVFVGNALVDMYLKCG 254
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ AR++F EMP KNV+ W SM+SG GQ
Sbjct: 255 DANFARKVFQEMPVKNVVSWNSMISGLAQKGQ---------------------------- 286
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
F E++ +FR+MQ + +KPD LVA+L CA LG LE GKW+H Y++ N+I D +
Sbjct: 287 ---FKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFI 343
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
AL++MYAKCG I++A +F + KD S+T++I GLAM+G+ KAL+LFS+M G
Sbjct: 344 GNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGI 403
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PD++TF+GVL+ACSH GLV+EGR++F M+ +Y ++P+LEHYGC++DLLGRAGL++EAE
Sbjct: 404 EPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAE 463
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E IR +P E + ++ GALL AC+I+G V++GE + +EKIE + + L++NIY+
Sbjct: 464 EFIRNMPIEPDAFVL---GALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYS 520
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
SANRW D +R+ MKE + K PGCSSIE++G+IHEF GD SH ++KEIY +LD +
Sbjct: 521 SANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMS 580
Query: 599 TL 600
L
Sbjct: 581 HL 582
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/594 (40%), Positives = 359/594 (60%), Gaps = 6/594 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+T LKQ+ AQI + L ++ L KL++ S +L YA +F I P N +
Sbjct: 36 LTHLKQVHAQILRSKLDRSTSLLVKLVISSCALS-SSLDYALSVFNLIPKPETHLCNRFL 94
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ K+LL++ ++R +G++ D F++P + KA+ + + +G ++HG K G +
Sbjct: 95 RELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFD 154
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V ++ MY G+I + +FD+M +DVV+W++ I G+ + F DA+ +F M
Sbjct: 155 SDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEM 214
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
+ N+ PDE + + LSAC NL GK IH +I + P + +AL+ MY CG
Sbjct: 215 KN-YNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGS 273
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A LF++M KN++ T+MV+GY GQ+E AR +F++ +D+V W+AMI+GY +
Sbjct: 274 MDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAES 333
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ EA+ LF EMQ + +KPD+ +++++T CA LGAL+Q KWIH ++++N +
Sbjct: 334 DSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPIN 393
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALIEMYAKCG +E+A IF ++ K+ SWT +I AM+G AL F QM +
Sbjct: 394 NALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIE 453
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+ ITF+GVL ACSH GLV+EGR+ F +M + I PK HYGC++DL GRA LL EA E
Sbjct: 454 PNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALE 513
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
L+ +P N II +G+L++ACR++G +++GE A L +++ H L+NIYA
Sbjct: 514 LVEAMPLAPNVII---WGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAK 570
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
A RWEDV VR+ MK G+ K GCS E+N IHEFLV D SH EIY L
Sbjct: 571 ARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKL 624
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/598 (39%), Positives = 367/598 (61%), Gaps = 36/598 (6%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L +I A + + L P+ L+ ++ YA IF I P AYN++I+ F
Sbjct: 40 LNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGF 99
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
K S +++LLF ++ E V PD FT+P + K L + +GE++H ++K G
Sbjct: 100 TLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHG 159
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N+++ MY G++ +++FDEM +++V +WN +G+ K +E+ V +F M +
Sbjct: 160 FVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLE- 218
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSE 242
++ DE T+VS L+AC L +LELG+ I+RY+ ++ L+ P + +L+DMY K
Sbjct: 219 LDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAK------ 272
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
CGQ++ AR LFD+ RD+V W+AMI+GY Q +R
Sbjct: 273 -------------------------CGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRC 307
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ LF EMQ + P++ +V++L+ CA LGALE GKW+H +I + R+ + + TAL
Sbjct: 308 REALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTAL 367
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++ YAKCG +E ++E+F ++ K+ SWT +I GLA NG+ KALE F M+ +P+D
Sbjct: 368 MDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPND 427
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+TFIGVLSACSH GLVDEGR F +M+ + I+P++EHYGC++D+LGRAGL++EA + I+
Sbjct: 428 VTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIK 487
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + N +I + LL++C+++ NV++GE+ L +E S + LL+NIYAS R
Sbjct: 488 NMPIQPNAVI---WRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGR 544
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
WED VR +MKE G++K PGCS IE++G+IHEF D HS+ +EIY+ ++ M K +
Sbjct: 545 WEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQI 602
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/669 (36%), Positives = 381/669 (56%), Gaps = 78/669 (11%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTH-----PSHGNLLYAEKIFGSIQSPCLLAYN 57
KQ+ +Q GL +P ++L+ F +H P H Y+ +IF +++P +N
Sbjct: 18 HFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFH----YSLRIFNHLRNPNTFTWN 73
Query: 58 LLIKA-FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
+++A + S ++LL + PD++TYP + + +G ++H + V
Sbjct: 74 TIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVS 133
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
+G + D YV N++M++Y V G + + +++F+E P D+VSWN ++G+V+ E+A V
Sbjct: 134 SGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERV 193
Query: 177 FRRM----------------RQGC------------------------------NLMPDE 190
F M R+GC N M +E
Sbjct: 194 FEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEE 253
Query: 191 GTVV-----------------STLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLD 232
V+ S LSAC+ + N+E+G+ +H + +E + NAL+
Sbjct: 254 ALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIH 313
Query: 233 MYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
+Y CG + +AR +FD+ ++I W SM+SGY+ CG ++ A LF P +D+V W+A
Sbjct: 314 LYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSA 373
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI+GY Q F EA+ALF+EMQ+ ++PD+ LV+ ++ C L L+ GKWIH YI+ N+
Sbjct: 374 MISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNK 433
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ V+ +++T LI+MY KCG +E ALE+FY + EK ++W ++I GLAMNG + ++L +F+
Sbjct: 434 LQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFA 493
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
M G P++ITF+GVL AC H GLV++GR +FN+M ++I+ ++HYGC++DLLGRA
Sbjct: 494 DMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRA 553
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
GLL EAEELI +P + V +GALL ACR + + +MGE+L L +++ FH
Sbjct: 554 GLLKEAEELIDSMPMAPD---VATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHV 610
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LL+NIYAS W +V +R M + GV K PGCS IE NG +HEFL GD +H ++ +I
Sbjct: 611 LLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEH 670
Query: 592 MLDRMAKTL 600
MLD +A L
Sbjct: 671 MLDVVAAKL 679
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/596 (40%), Positives = 367/596 (61%), Gaps = 10/596 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQIQA++ G+ + +++++ FC G+L YA IF ++ P +N +I
Sbjct: 170 MRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMI 229
Query: 61 KAF--AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ + A+K F S ++ + + V D+ ++ F KA V +GE V+ V K G
Sbjct: 230 RGYQNARKPIFAFSFFVY--MFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMG 287
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ + V N ++ Y G + N +++FDE DKDVV+W I G+ E+A++VF
Sbjct: 288 FDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFE 347
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKC 237
M ++ P+E T+++ +SAC+ + NLE+GK +H + ++ + + + NALLDMY KC
Sbjct: 348 LMLLS-HVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKC 406
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
CL +ARELFD M K+V WTSMV+GY CG LE AR FD++P ++ V W+AMI GY
Sbjct: 407 DCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYS 466
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI-TVDA 356
Q N+ E++ LF EM + P + LV++L+ C QL L G WIH Y +I +
Sbjct: 467 QNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSV 526
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ A+++MYAKCG I+ A E+F + E++ SW ++I G A NG+ +A+ +F QM +
Sbjct: 527 TLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNM 586
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G +P++ITF+ +L+ACSHGGL+ EGR +F+ M Y I+P+ HY C++DLLGR GLL+E
Sbjct: 587 GFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEE 646
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A +LI +P + E +GALL+ACR++GNV++ A L +++ +DS + LLAN
Sbjct: 647 AYKLIANMPMQPCE---AAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANT 703
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
A+ +W DV VR MK+ GV+K+PG S IEI+G EFLV D SH + +EIY +
Sbjct: 704 CANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKL 759
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/602 (39%), Positives = 355/602 (58%), Gaps = 39/602 (6%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
QI + G+ ++P +KL+ + H + ++ +F I P + ++N + +A
Sbjct: 43 SFNQILSHAIASGVFRDPVVSSKLLYYSLSHDH-DFAFSRTLFFQIHKPNVFSWNFMFRA 101
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+++ +++ L++ + G PDN+++PFV KA L + KG ++H +K G+ D
Sbjct: 102 YSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLD 161
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+V N+++ + G + + +FD +P +DVVSWN ISG+++ R+E A+ VF +
Sbjct: 162 VFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWEL 221
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGC 239
+L PDE T+VS LS C L L+LGK+IH + +G++L+DMY KC
Sbjct: 222 LGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKC-- 279
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
GQ+E AR +FDR P R+ V WT+MI GY Q
Sbjct: 280 -----------------------------GQIEDARKVFDRIPHRNTVCWTSMIAGYAQS 310
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ F EA+ LFREMQI D + +L+ C GAL QG+WIH Y N I +D
Sbjct: 311 DLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNAR 370
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGA 418
ALI MY+KCG I+KALEIF+ L + D SW+++I GLAMNG+ +KAL LFSQM +
Sbjct: 371 NALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDI 430
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P++ITF+GVL AC+HGG VD+G +FN MT++Y + P +EHYGC++DLLGRA LL EAE
Sbjct: 431 RPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAE 490
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
+ IR +P + + +I + +LL ACR +GN+++ E A +E++E + LL+N+YA
Sbjct: 491 KFIRTLPIQPDVVI---WRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYA 547
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
SA+RW DV VR+ M ++K PGCS +EI+G++HE V D SH EM IY + + K
Sbjct: 548 SASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINK 607
Query: 599 TL 600
L
Sbjct: 608 AL 609
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/561 (41%), Positives = 340/561 (60%), Gaps = 34/561 (6%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
Y +F I+ P + +N +I+ F ++ + +R G P+NFT+PFV KA
Sbjct: 64 YTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACA 123
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L +++ G K+H VVK G + D +V S++ +Y G + + K+FD++PDK+VVSW
Sbjct: 124 RLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTA 183
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
ISG++ +F +A+D+FRR+ + NL PD T+V LSACT L +L G+ IH+ I +
Sbjct: 184 IISGYIGVGKFREAIDMFRRLLE-MNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIME- 241
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
MG +NV TS+V Y CG +EKAR +FD
Sbjct: 242 ------MGMV-----------------------RNVFVGTSLVDMYAKCGNMEKARSVFD 272
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P +DIV W AMI GY EA+ LF +MQ +KPD + +V +L+ CA+LGALE
Sbjct: 273 GMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALEL 332
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G+W+ G ++ N + V+ TALI++YAKCG + +A E+F ++EKD W +II GLAM
Sbjct: 333 GEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAM 392
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
NG + + LF Q+ G KPD TFIG+L C+H GLVDEGRR+FN+M + + P +E
Sbjct: 393 NGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIE 452
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGC++DLLGRAGLLDEA +LIR +P E N I+ +GALL ACRI+ + + E L
Sbjct: 453 HYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIV---WGALLGACRIHRDTQLAELALKQL 509
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E +S + LL+NIY++ +W++ VR M E ++K PGCS IE++GI+HEFLVG
Sbjct: 510 IELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVG 569
Query: 580 DPSHSEMKEIYSMLDRMAKTL 600
D H ++IY+ LD + K +
Sbjct: 570 DKYHPLSEKIYAKLDELTKKM 590
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 202/420 (48%), Gaps = 56/420 (13%)
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
+ GL D Y+ N I+ + LF ++ ++ WN I G V F+DA++
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+ MR +P+ T L AC L +L+LG +IH + + G D++
Sbjct: 99 FYGLMRSE-GFLPNNFTFPFVLKACARLLDLQLGVKIHTLV--------VKGGFDCDVFV 149
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K TS+V Y CG LE A +FD P +++V WTA+I+G
Sbjct: 150 K----------------------TSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Y+ +F EA+ +FR + + L PD F +V +L+ C QLG L G+WIH I E + +
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V T+L++MYAKCG +EKA +F + EKD SW ++I G A+NG +A++LF QM
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307
Query: 416 GGAKPDDITFIGVLSACSH----------GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
KPD T +GVLSAC+ GLVD +N + LI
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGT-----------ALI 356
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DL + G + A E+ + + ++ + + A++S + G V + L +EK+ K
Sbjct: 357 DLYAKCGSMSRAWEVFKGMKEKDRVV----WNAIISGLAMNGYVKISFGLFGQVEKLGIK 412
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 194/373 (52%), Gaps = 35/373 (9%)
Query: 25 KLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGV 84
K + C + G L A K+F I ++++ +I + G FR+++ +F +L E +
Sbjct: 150 KTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNL 209
Query: 85 SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK 144
+PD+FT V A LG++ GE +H +++ G+ + +V S++DMY G + +
Sbjct: 210 APDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARS 269
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+FD MP+KD+VSW I G+ ++A+D+F +M++ N+ PD TVV LSAC L
Sbjct: 270 VFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRE-NVKPDCYTVVGVLSACARLG 328
Query: 205 NLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
LELG+ + +++ E + P++G AL+D+Y KCG +S A E+F M K+ + W +++S
Sbjct: 329 ALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIIS 388
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G +NGYV+ + LF +++ + +KPD
Sbjct: 389 GLA--------------------------MNGYVKI-----SFGLFGQVEKLGIKPDGNT 417
Query: 324 LVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+ LL GC G +++G ++ + +T ++++ + GL+++A ++ +
Sbjct: 418 FIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNM 477
Query: 383 -REKDAASWTSII 394
E +A W +++
Sbjct: 478 PMEANAIVWGALL 490
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/629 (38%), Positives = 376/629 (59%), Gaps = 67/629 (10%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
KQI A I + GL L+KL+ F G++ YA +F SI+ P L +N +I+
Sbjct: 45 FKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGL 104
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ S +L+ F ++ GV P+++T+PF+ K+ L +G+++H +V+K G D
Sbjct: 105 SMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDV 164
Query: 124 YVCNSIMDMYGVLGKICNV-------------------------------KKLFDEMPDK 152
++ S+++MY G++ N ++LFDEMP K
Sbjct: 165 FIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVK 224
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
DVVSWN I+G+ + R ++A+ +F MR+ N+ P+E T+VS LSAC L+LG +
Sbjct: 225 DVVSWNAMIAGYAQMGRSKEALLLFEDMRKA-NVPPNESTIVSVLSACAQSNALDLGNSM 283
Query: 213 HRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
+I ++ L + NAL+DMY KCG L
Sbjct: 284 RSWIEDRGLCSNLKLVNALIDMYSKCG-------------------------------DL 312
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+ AR+LFD RD++ W MI GY + EA+ALFREM ++P + +++L C
Sbjct: 313 QTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSC 372
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
A LGA++ GKWIH YIN+N +V ++T+LI++YAKCG I A ++F ++ K ASW
Sbjct: 373 AHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWN 432
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
++ICGLAM+G+ +KA ELFS+M S G +P++ITF+G+LSAC H GLVD G++FF++M +
Sbjct: 433 AMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQD 492
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
Y+I PK +HYGC+IDLLGRAGL +EAE L++ + + + I +G+LL ACR +G V++
Sbjct: 493 YKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAI---WGSLLGACRDHGRVEL 549
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
GE +A L ++E + + LL+NIYA A +W+DV +R ++ + G++KVPGC++IE++
Sbjct: 550 GELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDN 609
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++HEFLVGD H + ++IY ML+ + + L
Sbjct: 610 VVHEFLVGDKVHPQSEDIYRMLEEVDEQL 638
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 248/487 (50%), Gaps = 38/487 (7%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSI 161
++ +++H +++KTGL + + +++ V G I LF+ + + ++ WN I
Sbjct: 42 IRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMI 101
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
G + A+ F RM + P+ T L +C L + GK+IH ++ +L
Sbjct: 102 RGLSMSLSPALALVFFVRMIYS-GVEPNSYTFPFLLKSCAKLASAHEGKQIHAHV-LKLG 159
Query: 222 FTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
F + +L++MY + G ++ A+ +FD+ ++ I +T++++GY G +++AR LFD
Sbjct: 160 FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFD 219
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
PV+D+V W AMI GY Q R EA+ LF +M+ + P++ +V++L+ CAQ AL+
Sbjct: 220 EMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDL 279
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G + +I + + + + ALI+MY+KCG ++ A E+F ++ E+D SW +I G
Sbjct: 280 GNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTH 339
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ---- 455
+AL LF +M++ G +P +ITF+ +L +C+H G +D G+ + + +
Sbjct: 340 MCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSL 399
Query: 456 --------------------------PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
L + +I L G D+A EL K+ ++
Sbjct: 400 STSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGI 459
Query: 490 EIIVPLYGALLSACRIYGNVDMGEK-LAALLEKIE-SKDSSFHTLLANIYASANRWEDVT 547
E + +LSAC+ G VD+G++ +++++ + S S + + ++ A +E+
Sbjct: 460 EPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAE 519
Query: 548 NVRQKMK 554
++ Q M+
Sbjct: 520 SLLQNME 526
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/604 (39%), Positives = 378/604 (62%), Gaps = 13/604 (2%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTH-PSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
QI AQ GL ++++L+ F + S L ++ +F I P L +N +I+ ++
Sbjct: 27 QIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYS 86
Query: 65 KKGSFRKSLLLFSKLRERGVSP-DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ + R++++L+ + +G++P +NFT+PF+ + L ++ G +VH +++K G E D
Sbjct: 87 RSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDL 146
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N+++ +Y V G + + LFDE +D+VS+N I G+ + + E A+ +F M Q
Sbjct: 147 FVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEM-QN 205
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL---EFTPIMGNALLDMYCKCGCL 240
++PDE T V+ S C+ L +GK+IH + + L + ++ +A++DMY KCG +
Sbjct: 206 SGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLI 265
Query: 241 SEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A +F M +K+ W+SMV GY CG++ AR LF+ RD++ WTAMI+GY Q
Sbjct: 266 NIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQA 325
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVV 358
+ EA+ LF+EM+ + +KPD+ LVA+L+ CA+LGA + GK + H YI + ++
Sbjct: 326 GQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTIL 385
Query: 359 ATALIEMYAKCGLIEKALEIFYELRE--KDAASWTSIICGLAMNGKINKALELFSQMISG 416
A+++MYAKCG I+ ALEIF + + K + S+I GLA +G A+ +F ++IS
Sbjct: 386 TAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIST 445
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G KPD++TF+GVL AC H GL++EG++ F +M Y I+P++EHYGC++DLLGR G L+E
Sbjct: 446 GLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEE 505
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A +L++K+P E N +I + ALLSACR +GNV +GE L ++E++ + + LL+NI
Sbjct: 506 AYDLVQKMPFEANSVI---WRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNI 562
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
A AN+WE+ VR+ M++ G+RK PG S IE+ G IH F+ D SH + KEI ML M
Sbjct: 563 LADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDM 622
Query: 597 AKTL 600
A L
Sbjct: 623 AMRL 626
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 194/418 (46%), Gaps = 69/418 (16%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK---ICNVKKLFDEMPDKDVVSWNVSI 161
K+G ++H + GL + + ++ + +LG + + + LF ++ ++ WN I
Sbjct: 23 KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMI 82
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQEL 220
G+ + +A+ ++ M P+ T L++C L +LE G E+H + I
Sbjct: 83 RGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGF 142
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
E + NAL+ +Y G L+ AR LFDE ++++ + +M+ GY Q E
Sbjct: 143 ESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPES------- 195
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
A+ LF EMQ + PD+F VAL + C+ L G
Sbjct: 196 ------------------------ALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVG 231
Query: 341 KWIHGYINENRITVDA--VVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGL 397
K IH + +N ++D+ ++ +A+++MYAKCGLI A +F + K AA+W+S++CG
Sbjct: 232 KQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGY 291
Query: 398 AMNGKIN-------------------------------KALELFSQMISGGAKPDDITFI 426
A G+IN +ALELF +M + G KPD++T +
Sbjct: 292 ARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLV 351
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
VLSAC+ G D G+R ++ E ++D+ + G +D A E+ R++
Sbjct: 352 AVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV 409
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/536 (43%), Positives = 345/536 (64%), Gaps = 9/536 (1%)
Query: 73 LLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK-GEKVHGYVVKTGLEFDTYVCNSIMD 131
L ++ + RG PD +T+P + KAV E G+ VH +VVK G+E + +V +S++
Sbjct: 3 LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVL 62
Query: 132 MYGVLGKICNVKKLFDEMPDK---DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
MY G + L D P + V WN ISGH + +F + F M + ++P
Sbjct: 63 MYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVR-TGVVP 121
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELF 247
T ++ LSAC K + LG ++H+ + + +GNAL+DMY +C + A ELF
Sbjct: 122 TPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELF 181
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
+ M +N + WTS++SG++ GQ+++AR LFD P RD V WTAMI+GYVQ +F EA+
Sbjct: 182 EGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALE 241
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
+FREMQ +++ D+F +V+++T CAQLGALE G+W Y++ + I +D V AL++MY+
Sbjct: 242 MFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYS 301
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG I++AL +F E+ +D +WT++I GLA+NG +A+ +F +M+ PD++TFIG
Sbjct: 302 KCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIG 361
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
VL+AC+H GLVD+GR FF +MT Y I P + H+GCLIDLLGRAG L EA E I +P
Sbjct: 362 VLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMR 421
Query: 488 NNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVT 547
N I +G LL+ACR++GN ++G+ A L ++++++ + LL+N+YA +NRWEDV
Sbjct: 422 PNSAI---WGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVR 478
Query: 548 NVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+RQ + E G++K PGCS IE+NG IHEF+ GD SH KEIYS LD++ L D+
Sbjct: 479 RLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLKDA 534
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 191/440 (43%), Gaps = 87/440 (19%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL-----------LA 55
+ A + + G++ N + L+ L+YA + G++ L +
Sbjct: 41 VHAHVVKFGMELNAHVASSLV----------LMYAARGDGAVARTLLDAWPARGGDTPVV 90
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N LI + FR S F + GV P TY V A G + G +VH VV
Sbjct: 91 WNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVV 150
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK--------- 166
+G+ D V N+++DMY ++ +LF+ M ++ VSW ISG ++
Sbjct: 151 ASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQART 210
Query: 167 ---CM-------------------RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
CM +F +A+++FR M Q + DE T+VS ++AC L
Sbjct: 211 LFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREM-QFSKVRADEFTMVSVVTACAQLG 269
Query: 205 NLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
LE G+ Y+++ ++ +GNAL+DMY KCG + +A +F EM ++ WT+++
Sbjct: 270 ALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVIL 329
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G +NG+ + EA+ +F M + PD+
Sbjct: 330 GLA--------------------------VNGHGE-----EAINMFYRMLRVFEAPDEVT 358
Query: 324 LVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+ +LT C G +++G+ + I + + LI++ + G +++ALE +
Sbjct: 359 FIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNM 418
Query: 383 REK-DAASWTSIICGLAMNG 401
+ ++A W +++ ++G
Sbjct: 419 PMRPNSAIWGTLLAACRVHG 438
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 11/277 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +F + +++ +I + + G FR++L +F +++ V D FT V
Sbjct: 203 GQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVV 262
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG ++ GE Y+ + G++ DT+V N+++DMY G I +F EM +D
Sbjct: 263 TACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKF 322
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G E+A+++F RM + PDE T + L+ACT ++ G++
Sbjct: 323 TWTAVILGLAVNGHGEEAINMFYRMLRVFE-APDEVTFIGVLTACTHAGLVDKGRDFFLS 381
Query: 216 INQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMPNK-NVICWTSM-----VSGYVN 267
+ P + L+D+ + G L EA E MP + N W ++ V G
Sbjct: 382 MTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSE 441
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
GQL A L + +V + + N Y + NR+++
Sbjct: 442 IGQL-AAEHLLELDTENGMV-YILLSNLYAKSNRWED 476
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/600 (39%), Positives = 363/600 (60%), Gaps = 36/600 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LK I A + ++GL ++ LNK++ F + GN Y+ +I + P + +N +I
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSF--NFGNTNYSFRILDQTKEPNIFLFNTMI 80
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ F++S+ ++ +R+ G+SPD+FT+PFV KA + + + G K+H VVK G E
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCE 140
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V S++++Y G I N K+FD++PDK+ SW +ISG+V + +A+D+FRR+
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ L PD ++V LSAC +L G+ I YI + N ++
Sbjct: 201 LE-MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITE---------NGMV--------- 241
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+NV T++V Y CG +E+AR +FD ++IV W++MI GY
Sbjct: 242 ------------RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNG 289
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LF +M LKPD + +V +L CA+LGALE G W IN N ++V+ T
Sbjct: 290 LPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGT 349
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MYAKCG +++A E+F +R+KD W + I GLAM+G + AL LF QM G KP
Sbjct: 350 ALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKP 409
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D TF+G+L AC+H GLV+EGRR+FN+M V+ + P++EHYGC++DLLGRAG LDEA +L
Sbjct: 410 DRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQL 469
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+ +P E N I+ +GALL CR++ + + E + L +E S + LL+NIYA++
Sbjct: 470 IKSMPMEANAIV---WGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAAS 526
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++WE+ +R M E GV+K+PG S IE++G++H+FLVGD SH ++IY+ L +AK L
Sbjct: 527 HKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDL 586
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/527 (44%), Positives = 334/527 (63%), Gaps = 6/527 (1%)
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV 135
++++ RG PD +T+P + KAV VH +VVK G+ + +V S++ Y
Sbjct: 31 YARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAA 90
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
G + L E V WN ISGH +C RF +A F M + P T VS
Sbjct: 91 GGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARA-GAAPTPVTYVS 149
Query: 196 TLSAC-TALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
LSAC ++ LG ++H R + + + NAL+DMY +C + A +LFD M +
Sbjct: 150 VLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVR 209
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+V+ WTS++SG G++++ARDLF R P RD V WTAMI+GYVQ RF EA+ +FREMQ
Sbjct: 210 SVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQ 269
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+ D+F +V+++T CAQLGALE G+W+ Y++ I +DA V ALI+MY+KCG IE
Sbjct: 270 CSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIE 329
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+AL++F ++ +D +WT+II GLA+NG +A+E+F +MI PD++TFIGVL+AC+
Sbjct: 330 RALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACT 389
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H GLVD+GR FF +M E Y I P + HYGC+IDL GRAG + EA + I ++P N I
Sbjct: 390 HAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTI- 448
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+G LL+ACR++GN ++GE + L +++ ++S+ +TLL+NIYA NRWEDV +R +
Sbjct: 449 --WGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTI 506
Query: 554 KEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
E G++K PGCS IE+NGIIHEF+ GD SH KEIY L+ + L
Sbjct: 507 MEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDL 553
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 136/277 (49%), Gaps = 11/277 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +FG + +++ +I + + FR++L +F +++ VS D FT V
Sbjct: 225 GRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVI 284
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG ++ GE V Y+ + G++ D +V N+++DMY G I +F +M +D
Sbjct: 285 TACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKF 344
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G E+A+++F RM G + PDE T + L+ACT ++ G+E
Sbjct: 345 TWTAIILGLAVNGYGEEAIEMFHRM-IGVSETPDEVTFIGVLTACTHAGLVDKGREFFLS 403
Query: 216 INQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMP-NKNVICWTSM-----VSGYVN 267
+ + P + ++D++ + G ++EA + D+MP N W ++ V G
Sbjct: 404 MRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSE 463
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
G+L R L P V +T + N Y + NR+++
Sbjct: 464 IGELVTER-LLQMDPENSTV-YTLLSNIYAKCNRWED 498
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 19/258 (7%)
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
++AVA + M PD + LL A+ + + +H ++ + + +A VAT+L
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
+ YA G A + E W ++I G + +A F M GA P
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 423 ITFIGVLSACSHG------GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
+T++ VLSAC G G+ GR + + P L L+D+ ++
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGS------GVLPDLRVENALVDMYAECADMES 198
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A +L + + V + +LLS G VD L ++ +D+ T + +
Sbjct: 199 AWKLFDGMQVRS----VVSWTSLLSGLTRLGRVDEARD---LFGRMPERDTVSWTAMIDG 251
Query: 537 YASANRWEDVTNVRQKMK 554
Y A R+ + + ++M+
Sbjct: 252 YVQAARFREALEMFREMQ 269
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/601 (39%), Positives = 365/601 (60%), Gaps = 36/601 (5%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQI A+ L + K++ + SH L YA ++F Q P YN +I
Sbjct: 19 IQQLKQIHAKSIISSLSYTQFIITKII--NSFLSHACLDYATQVFNQTQEPDGFIYNAMI 76
Query: 61 KAFAKKGSFRKSLLLFSKLRE-RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+A++ + ++ +++K+R + + D +TYPFVFKA V+KG++VHG +V+ G
Sbjct: 77 RAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGY 136
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E D ++ +S+++ Y V G+I N +++FDE KDVV WN I+G+ + D+ VF+
Sbjct: 137 ELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKE 196
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
M + + P+EGT++ + AC KNL+LG+ IH Y+ + DM + G
Sbjct: 197 MVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYM-------------MKDMVLREGV 243
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
EA ++++ YV CG L+ AR LFD P ++ V+W ++I GY Q
Sbjct: 244 KLEA----------------ALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQI 287
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+E + L REM + LKPD+F + +L+ CAQ+GA G W+H + + I D +
Sbjct: 288 GSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIW-DVFIG 346
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TALI+MYAKCG I A ++F ++ E++ A+W +I+ G A +G+ A+ELFS+M GA+
Sbjct: 347 TALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGAR 406
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD ITF+ VL AC+H GLV+ G+++F+ M + Y+I P++EHYGC++DLLGRAGLL EA E
Sbjct: 407 PDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARE 466
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI+ + E N V ++GALLSAC I+GN+++GE A + K+ + D + +LAN+YAS
Sbjct: 467 LIKMMVVEPN---VVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYAS 523
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
A R+ V VR+ M E G+ K GCS IEI ++HEF+V D H +EIYS+LD ++K
Sbjct: 524 AQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKK 583
Query: 600 L 600
L
Sbjct: 584 L 584
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/599 (39%), Positives = 362/599 (60%), Gaps = 7/599 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
QLKQI A + + +P T +KL+ S L+YA+ +F I P L +N LI+
Sbjct: 87 QLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRG 146
Query: 63 FAKKGSFRKSLLLF-SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A +S L+F L P+ FT+PF+FKA L + G +HG V+K L
Sbjct: 147 YASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSS 206
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D ++ NS+++ YG G ++F MP KDVVSWN I+ + A+ +F+ M
Sbjct: 207 DLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEME 266
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCL 240
++ P+ T+VS LSAC +LE G+ I YI N I+ NA+LDMY KCGC+
Sbjct: 267 MK-DVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCI 325
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
++A++LF++M K+++ WT+M+ G+ G ++A +FD P + W A+I+ Y Q
Sbjct: 326 NDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNG 385
Query: 301 RFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ A++LF EMQ+ + KPD+ L+ L AQLGA++ G WIH YI ++ I ++ +A
Sbjct: 386 KPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLA 445
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
T+L++MYAKCG + KA+E+F+ + KD W+++I LAM G+ AL+LFS M+ K
Sbjct: 446 TSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIK 505
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+ +TF +L AC+H GLV+EG + F M +Y I P+++HY C++D+ GRAGLL++A
Sbjct: 506 PNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAAS 565
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
I K+P + +GALL AC +GNV++ E L ++E + LL+NIYA
Sbjct: 566 FIEKMPIPPTAAV---WGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAK 622
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
A WE V+N+R+ M++ V+K P CSSI++NGI+HEFLVGD SH ++IYS LD +++
Sbjct: 623 AGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISE 681
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/601 (41%), Positives = 371/601 (61%), Gaps = 5/601 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LK + AQI GL TL KL+ FC G+L YA+++F I P YN LI
Sbjct: 1 MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ ++LLF ++ G+SP+ FT PFV KA G + VHG +K G+
Sbjct: 61 RGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIG 120
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+V N+++ +Y V G I +KLFD++ DK +VSWN I G+ +++A +FR+M
Sbjct: 121 SLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKM 180
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGC 239
R+ + PD T V+ LS C+ ++L+LG+ +H I ++ I+ NAL+DMY KCG
Sbjct: 181 RE-WGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGN 239
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L A+ +FD KNV+ WTSM+S Y G +E AR +FD+ P +++V W +MI+ Y++
Sbjct: 240 LHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLRE 299
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
++ EA+ LF +M+ R+ PD+ LV++L C+QLG L GK IH YI N+ +
Sbjct: 300 GQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLY 359
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+LI+MYAKCG + AL+IF E+ K+ SW II LA++G +A++LF +M + G
Sbjct: 360 NSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTL 419
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD+IT G+LSACSH GLVD G +F+ M +Y++ ++EHY C++DLLGR GLL EA E
Sbjct: 420 PDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIE 479
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI ++P + + V ++GALL ACRI+GNV++G+++ L ++E + L++NIY
Sbjct: 480 LIGRMPMKPD---VVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWE 536
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
A RWEDV +R+ M + G++K SSIEI+G I+EF+V D H IY+MLD++
Sbjct: 537 AQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDH 596
Query: 600 L 600
L
Sbjct: 597 L 597
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/599 (39%), Positives = 364/599 (60%), Gaps = 50/599 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL--LAYNLLIKA 62
K+I + ++G + N L+ + GN+ A K+F +SP L +++N ++
Sbjct: 161 KEIHDHVLKVGFDSDVYVQNTLINM--YAVCGNMRDARKLFD--ESPVLDSVSWNSILAG 216
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ KKG ++ L+F ++ +R +
Sbjct: 217 YVKKGDVEEAKLIFDQMPQRNI-------------------------------------- 238
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
NS++ + G +G++ KLF+EM +KD+VSW+ ISG+ + +E+A+ +F M
Sbjct: 239 -VASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 297
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLS 241
+ DE VVS LSAC L ++ GK IH I +E + NAL+ MY G +
Sbjct: 298 N-GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIM 356
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+A++LF+ N + I W SM+SG + CG +EKAR LFD P +DIV W+A+I+GY Q +
Sbjct: 357 DAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDC 416
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
F E +ALF EMQ+ +++PD+ ILV++++ C L AL+QGKW+H YI +N + V+ ++ T
Sbjct: 417 FSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTT 476
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MY KCG +E ALE+F + EK +SW ++I GLA+NG + ++L++FS+M + G P+
Sbjct: 477 LLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPN 536
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+ITF+GVL AC H GLVDEGR F +M E + I+P ++HYGC++DLLGRAGLL+EAE+LI
Sbjct: 537 EITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLI 596
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P + V +GALL AC+ +G+ +MGE++ L +++ FH LL+NI+AS
Sbjct: 597 ESMPMAPD---VATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKG 653
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
WEDV VR MK+ GV K PGCS IE NG++HEFL GD +H + ++ ML+ MAK L
Sbjct: 654 DWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRL 712
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/586 (25%), Positives = 262/586 (44%), Gaps = 138/586 (23%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q +I +Q+ G + ++L+ F T L Y+ +IF I++ +N ++
Sbjct: 54 LKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMM 113
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ + S K+LLL+ + + V PDN+TYP V +A G+++H +V+K G +
Sbjct: 114 RAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFD 173
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D YV N++++MY V G + + +KLFDE P D VSWN ++G+VK E+A +F +
Sbjct: 174 SDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQ- 232
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
MP V S N+++ + K G +
Sbjct: 233 ------MPQRNIVAS--------------------------------NSMIVLLGKMGQV 254
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
EA +LF+EM K+++ W++++SGY G
Sbjct: 255 MEAWKLFNEMDEKDMVSWSALISGYEQNGM------------------------------ 284
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
++EA+ +F EM ++ D+ ++V++L+ CA L ++ GK IHG + I +
Sbjct: 285 -YEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQN 343
Query: 361 ALIEMYA-------------------------------KCGLIEKALEIFYELREKDAAS 389
ALI MY+ KCG +EKA +F + EKD S
Sbjct: 344 ALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVS 403
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF---- 445
W+++I G A + ++ L LF +M G +PD+ + V+SAC+H +D+G+
Sbjct: 404 WSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIR 463
Query: 446 -----------NTMTEVYQ----IQPKLE-----------HYGCLIDLLGRAGLLDEAEE 479
T+ ++Y ++ LE + LI L GL++ + +
Sbjct: 464 KNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLD 523
Query: 480 LIRKIPNEN---NEIIVPLYGALLSACRIYGNVDMGE-KLAALLEK 521
+ ++ N NEI + +L ACR G VD G A+++EK
Sbjct: 524 MFSEMKNNGVIPNEIT---FMGVLGACRHMGLVDEGRCHFASMIEK 566
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/601 (39%), Positives = 363/601 (60%), Gaps = 7/601 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LK + AQI GL TL KL+ C G+L YA +F I P YN LI
Sbjct: 52 MKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQ--EGDLRYAHLLFDQIPQPNKFMYNHLI 109
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ KSLLLF ++ G P+ FT+PFV KA + VH +K G+
Sbjct: 110 RGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMG 169
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
V N+I+ Y I + +++FD++ D+ +VSWN I+G+ K ++A+ +F+ M
Sbjct: 170 PHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEM 229
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGC 239
Q + D T+VS LSA + NL+LG+ +H YI +E I+ NAL+DMY KCG
Sbjct: 230 LQ-LGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGH 288
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L A+ +FD+M +K+V+ WTSMV+ Y N G +E A +F+ PV+++V W ++I VQ
Sbjct: 289 LQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQE 348
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
++ EAV LF M I + PD LV++L+ C+ G L GK H YI +N ITV +
Sbjct: 349 GQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLC 408
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+LI+MYAKCG ++ A++IF+ + EK+ SW II LA++G +A+E+F M + G
Sbjct: 409 NSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLY 468
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD+ITF G+LSACSH GLVD GR +F+ M ++I P +EHY C++DLLGR G L EA
Sbjct: 469 PDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMT 528
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI+K+P + + ++ +GALL ACRIYGN+++ +++ L ++ +S + LL+N+Y+
Sbjct: 529 LIQKMPVKPDVVV---WGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSE 585
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
+ RW+D+ +R+ M + G++K S IEI+G ++F+V D H IYS+LD++
Sbjct: 586 SQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDH 645
Query: 600 L 600
L
Sbjct: 646 L 646
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 46/278 (16%)
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
P L LL C+ + L K +H I + + V L+ + + G + A
Sbjct: 36 SPTHQTLHHLLDQCSSMKRL---KLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHL 92
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS---- 433
+F ++ + + + +I G + + K+L LF QM+S G P+ TF VL AC+
Sbjct: 93 LFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPF 152
Query: 434 -------HGG------------------------LVDEGRRFFNTMTEVYQIQPKLEHYG 462
H L+ R+ F+ +++ + +
Sbjct: 153 YWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISD-----RTIVSWN 207
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE--KLAALLE 520
+I + G DEA L +++ E V +LLSA + N+D+G L ++
Sbjct: 208 SMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVIT 267
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+E DS L ++YA + +V +M + V
Sbjct: 268 GVE-IDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDV 304
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/617 (37%), Positives = 372/617 (60%), Gaps = 16/617 (2%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQ + + G +P + +KL S +L YA K+F I P A+N LI
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 61 KAFAKKGSFRKSLLLF-SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+A+A S+ F + E P+ +T+PF+ KA + + G+ +HG VK+ +
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++ Y G + + K+F + +KDVVSWN I+G V+ + A+++F++
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
M + ++ T+V LSAC ++NLE G+++ YI + + + NA+LDMY KCG
Sbjct: 223 M-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ +A+ LFD M K+ + WT+M+ GY E AR++ + P +DIV W A+I+ Y Q
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 299 FNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ +EA+ +F E+Q+ + +K ++ LV+ L+ CAQ+GALE G+WIH YI ++ I ++
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V +ALI MY+KCG +EK+ E+F + ++D W+++I GLAM+G N+A+++F +M
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
KP+ +TF V ACSH GLVDE F+ M Y I P+ +HY C++D+LGR+G L++A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 478 EELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+ I +P I P ++GALL AC+I+ N+++ E L ++E ++ H LL+
Sbjct: 522 VKFIEAMP------IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA +WE+V+ +R+ M+ G++K PGCSSIEI+G+IHEFL GD +H +++Y L
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 595 RMAKTLLDSKQNAMEGD 611
+ + L K N E +
Sbjct: 636 EVMEKL---KSNGYEPE 649
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/663 (38%), Positives = 373/663 (56%), Gaps = 67/663 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q QI +Q+ G ++ ++L+ F T N+ + +IF I++P N ++
Sbjct: 39 IKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMM 98
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPF--------------------------- 93
K + ++ S K++ ++ + E V+ DN+TYP
Sbjct: 99 KGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFD 158
Query: 94 ------------------------VFKAVGWLGEVKKGEKVHGYVVKTGLE--FDTY--- 124
VF L V + GYV+ +E D Y
Sbjct: 159 SDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM 218
Query: 125 ------VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
NS++ ++G G + KLF+EM KD+VSW+ IS + + +E+A+ +F+
Sbjct: 219 PERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFK 278
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC 237
M +M DE V+S LSAC+ L + GK +H + + +E + NAL+ MY C
Sbjct: 279 EMNAN-GIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSC 337
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
+ A++LF E + I W SM+SGYV CG++EKAR LFD P +D V W+AMI+GY
Sbjct: 338 EEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYA 397
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q +RF E + LF+EMQI KPD+ ILV++++ C L AL+QGKWIH YI +N + ++ +
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINII 457
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ T LI MY K G +E ALE+F L EK ++W ++I GLAMNG ++K+L+ FS+M G
Sbjct: 458 LGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHG 517
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
P++ITF+ VL AC H GLVDEG R FN+M + ++I P ++HYGC++DLLGRAG+L EA
Sbjct: 518 VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEA 577
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
EELI +P + V +GALL AC+ YG+ + GE++ L ++ F+ LL+NIY
Sbjct: 578 EELIESMPMAPD---VSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIY 634
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
AS W DV VR M++ GV K PGCS IE +G +HEFL GD +H + + I MLD MA
Sbjct: 635 ASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMA 694
Query: 598 KTL 600
K L
Sbjct: 695 KKL 697
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/531 (43%), Positives = 338/531 (63%), Gaps = 12/531 (2%)
Query: 76 FSKLRERGVSPDNFTYPFVFKAV----GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMD 131
++++ RG PD +T+P + KAV G G VH +VV+ G+ + +V +S++
Sbjct: 7 YARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVA 66
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
Y G + L E V+WN ISGH + RF ++ F M + P
Sbjct: 67 AYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARA-GAAPTPV 123
Query: 192 TVVSTLSAC-TALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T VS LSAC +++ LG ++H R + + + NAL+DMY +C + A ++FD
Sbjct: 124 TYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDG 183
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
M ++V+ WTS++SG GQ+++ARDLFDR P RD V WTAMI+GYV RF EA+ +F
Sbjct: 184 MQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMF 243
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
REMQ + D+F +V+++T CAQLGALE G+W+ Y++ I +DA V ALI+MY+KC
Sbjct: 244 REMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKC 303
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
G IE+AL++F + +D +WT+II GLA+NG +A+E+F +MI PD++TFIGVL
Sbjct: 304 GSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVL 363
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
+AC+H GLVD+GR FF +M E Y I P + HYGC+IDLLGRAG + EA + I ++P N
Sbjct: 364 TACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPN 423
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
I +G LL+ACR++GN ++GE +A L +++ ++S + LL+NIYA NRWEDV +
Sbjct: 424 STI---WGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRL 480
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
R + E G++K PGCS IE++GIIHEF+ GD SH KEIYS L+ + L
Sbjct: 481 RHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDL 531
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 198/432 (45%), Gaps = 71/432 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ + A + ++G+ +N + L+ T + A + G +P +A+N LI
Sbjct: 43 RAVHAHVVRLGMGRNAHVASSLVAAYTAGG--DGAAARALVGECDTP--VAWNALISGHN 98
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG-WLGEVKKGEKVHGYVVKTGLEFDT 123
+ G F +S F + G +P TY V A G +V G +VHG VV +G+ D
Sbjct: 99 RGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDL 158
Query: 124 YVCNSIMDMY-------------------------------GVLGKICNVKKLFDEMPDK 152
V N+++DMY LG++ + LFD MP++
Sbjct: 159 RVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPER 218
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
D VSW I G+V RF +A+++FR M Q N+ DE T+VS ++AC L LE+G+ +
Sbjct: 219 DTVSWTAMIDGYVWAARFREALEMFREM-QYSNVSADEFTMVSVITACAQLGALEMGEWV 277
Query: 213 HRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
Y++ Q ++ +GNAL+DMY KCG + A ++F M +++ WT+++ G
Sbjct: 278 RVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLA----- 332
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+NGY + EA+ +F M + PD+ + +LT C
Sbjct: 333 ---------------------VNGYEE-----EAIEMFHRMIRVSETPDEVTFIGVLTAC 366
Query: 332 AQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAAS 389
G +++G+ + I I + V +I++ + G I +AL+ ++ ++
Sbjct: 367 THAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTI 426
Query: 390 WTSIICGLAMNG 401
W +++ ++G
Sbjct: 427 WGTLLAACRVHG 438
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 11/277 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +F + +++ +I + FR++L +F +++ VS D FT V
Sbjct: 203 GQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVI 262
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG ++ GE V Y+ + G++ D +V N+++DMY G I +F M +D
Sbjct: 263 TACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKF 322
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G E+A+++F RM + + PDE T + L+ACT ++ G+E
Sbjct: 323 TWTAIILGLAVNGYEEEAIEMFHRMIR-VSETPDEVTFIGVLTACTHAGLVDKGREFFLS 381
Query: 216 INQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMP-NKNVICWTSM-----VSGYVN 267
+ + P + ++D+ + G ++EA + D+MP N W ++ V G
Sbjct: 382 MIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
G+L R L + P +V + + N Y + NR+++
Sbjct: 442 IGELVAER-LLELDPENSMV-YILLSNIYAKCNRWED 476
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/606 (39%), Positives = 353/606 (58%), Gaps = 55/606 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNP-ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ LKQ+ AQI I +P + + P L YA+ IF +Q+P YN L
Sbjct: 109 LRHLKQVHAQI--ITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSL 166
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA-----VGWLGEVKKGEKVHGYV 114
I+A + + ++L L+ + + G+ PD+ TYPFV KA V W G + VH +V
Sbjct: 167 IRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLL-----VHTHV 221
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
VK+G E D+Y+ +S++ +Y + K+LF+ +DVVSWN I G+VK + A
Sbjct: 222 VKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHAR 281
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMY 234
VF RM C + I N +++ Y
Sbjct: 282 MVFDRM------------------VCRDV---------------------ISWNTMINGY 302
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
G + EA+ LFDEMP +N++ W SM++G+V CG +E A LF P RD+V W +M+
Sbjct: 303 AIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLA 362
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
Y Q + +EA+ALF +M+ + +KP + +V+LL+ CA LGAL++G +H YIN+NRI V
Sbjct: 363 CYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEV 422
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
+++V TAL++MYAKCG I A ++F + KD +W +II G+A++G + +A +LF +M
Sbjct: 423 NSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMK 482
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
G +P+DITF+ +LSACSH G+VDEG++ + M+ Y I+PK+EHYGC+IDLL RAG L
Sbjct: 483 EAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFL 542
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+EA ELI +P E N + GALL CRI+GN ++GE + L ++ S + LL+
Sbjct: 543 EEAMELIGTMPMEPNPSAL---GALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLS 599
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA+A +W+D VR MK G+ KVPG S IE+ G++H F+ GD SH E +IY L+
Sbjct: 600 NIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLN 659
Query: 595 RMAKTL 600
+ L
Sbjct: 660 EIHTRL 665
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/583 (38%), Positives = 358/583 (61%), Gaps = 26/583 (4%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
GL +P ++L+ FC L Y KI I++P ++N+ I+ F++ + + ++L
Sbjct: 5 GLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVL 64
Query: 75 LFSKLRERGV---SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMD 131
+ ++ RG PD+FTYP +FK L G + G+V K LE ++V N+ +
Sbjct: 65 AYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIH 124
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
M+ G++ N +K+FDE P +D+VSWN I+G+ K E A++V++ M + + PD+
Sbjct: 125 MFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVM-ESEGVKPDDV 183
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T++ +S+C L +L GKE + Y+ L T + NAL+DM+ KCG + EAR +FD +
Sbjct: 184 TMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNL 243
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
+ ++ LFD +D+V+W AMI G VQ R +A+ALF+
Sbjct: 244 EKRTIV------------------SKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQ 285
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
EMQ PD+ ++ L+ C+QLGAL+ G WIH YI ++ ++++ + T+L++MYAKCG
Sbjct: 286 EMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCG 345
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
I +AL +F+ ++ +++ ++T+II GLA++G + A+ F++MI G PD+ITFIG+LS
Sbjct: 346 NISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 405
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
AC HGG++ GR +F+ M + + P+L+HY ++DLLGRAGLL+EA++L+ +P E +
Sbjct: 406 ACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADA 465
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+ +GALL CR++GNV +GEK A L +++ DS + LL +Y AN WED R
Sbjct: 466 AV---WGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRAR 522
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+ M E GV K+PGCSSIE+NGI+ EF+V D S E ++IY L
Sbjct: 523 RMMNERGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCL 565
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/618 (36%), Positives = 370/618 (59%), Gaps = 17/618 (2%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQ A + + G+ +P + +KL S +L YA K+F I P +N LI
Sbjct: 44 LRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLI 103
Query: 61 KAFAKKGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+A+A S+ F + E P+ +T+PF+ KA + + G+ +HG +K+
Sbjct: 104 RAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSA 163
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ D +V NS++ Y G + + K+F + +KDVVSWN I+G V+ + A+++F+
Sbjct: 164 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 223
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC 237
+M ++ T+V LSAC +++LE G+ + YI + + + NA+LDMY KC
Sbjct: 224 KMESE-DVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKC 282
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G + +A+ LFD M K+ + WT+M+ GY E AR++ + P +DIV W A+I+ Y
Sbjct: 283 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYE 342
Query: 298 QFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q + +EA+ +F E+Q+ + +K ++ LV+ L+ CAQ+GALE G+WIH YI +N I ++
Sbjct: 343 QNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNF 402
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V +ALI MY+KCG +EKA E+F + ++D W+++I GLAM+G ++A+++F +M
Sbjct: 403 YVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEA 462
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KP+ +TF V ACSH GLVDE F M Y I P+ +HY C++D+LGR+G L++
Sbjct: 463 NVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEK 522
Query: 477 AEELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
A + I +P I P ++GALL AC+I+ N+ + E L ++E ++ H LL
Sbjct: 523 AVKFIEAMP------IPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLL 576
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA + +W++V+ +R+ M+ G++K PGCSSIEI+G+IHEFL GD +H +++Y L
Sbjct: 577 SNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 636
Query: 594 DRMAKTLLDSKQNAMEGD 611
+ + L K N E +
Sbjct: 637 HEVMEKL---KSNGYEPE 651
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 366/625 (58%), Gaps = 70/625 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ I AQ+ + GL L+KL+ FC P L YA +F +IQ P LL +N +
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A +L L+ + G+ P+++T+PF+ K+ K+G+++HG+V+K G
Sbjct: 63 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGC 122
Query: 120 EFDTYVCNSIMDMY-------------------------------GVLGKICNVKKLFDE 148
+ D YV S++ MY G I N +K+FDE
Sbjct: 123 DLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDE 182
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KDVVSWN ISG+ + +++A+++F+ M + N+ PDE T+V+ +SAC ++EL
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIEL 241
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H +I+ + + + NAL+D+Y KCG
Sbjct: 242 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCG----------------------------- 272
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+LE A LF+ P +D++ W +I GY N + EA+ LF+EM P+ ++++
Sbjct: 273 --ELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 330
Query: 328 LTGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
L CA LGA++ G+WIH YI++ + + + T+LI+MYAKCG IE A ++F + K
Sbjct: 331 LPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 390
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+SW ++I G AM+G+ + + ++FS+M G +PDDITF+G+LSACSH G++D GR F
Sbjct: 391 SLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF 450
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+MT+ Y++ PKLEHYGC+IDLLG +GL EAEE+I + E + +I + +LL AC++
Sbjct: 451 RSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVI---WCSLLKACKM 507
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+GNV++GE A L KIE ++ + LL+NIYA+A RW +V N R + + G++KVPGCS
Sbjct: 508 HGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCS 567
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIY 590
SIEI+ ++HEF++GD H +EIY
Sbjct: 568 SIEIDSVVHEFIIGDKFHPRNREIY 592
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/626 (38%), Positives = 369/626 (58%), Gaps = 70/626 (11%)
Query: 13 QIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRK 71
+IGL L+KL+ FC P L YA +F SIQ P L++N +I+ A
Sbjct: 2 KIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPIS 61
Query: 72 SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMD 131
+L L+ + G+SP+++T+PF+FK+ ++G+++H ++K GL D +V S++
Sbjct: 62 ALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLIS 121
Query: 132 MY---GVL----------------------------GKICNVKKLFDEMPDKDVVSWNVS 160
MY G++ G + +K+FDE+P KDVVSWN
Sbjct: 122 MYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAM 181
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQE 219
ISG+ + R+++A+++F M + ++ PDE T+ + LS CT N+ELG++IH +I N
Sbjct: 182 ISGYAEIGRYKEALELFNEMMK-MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG 240
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ NAL+D+Y KCG ++E+A LF+
Sbjct: 241 FGSNLKLVNALIDLYSKCG-------------------------------EMERAHGLFE 269
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
+D++ W +I GY N EA+ +F+EM + P+ ++++L CA LGA++
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329
Query: 340 GKWIHGYINEN--RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
G+WIH YI++ I + + T+LI+MYAKCG IE A ++F + K +S ++I G
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
AM+G+ + A +L S+M G +PDDITF+G+LSACSH GL D GR+ F +MT Y+I+PK
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPK 449
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
LEHYGC+IDLLGR+GL EAEELI + E + +I +G+LL AC+I+ N+++GE +A
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVI---WGSLLKACKIHKNLELGELIAQ 506
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
L KIE K+ + LL+NIYA++ RW+DV VR + + G++KVPGCSSIEI+ ++HEFL
Sbjct: 507 KLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFL 566
Query: 578 VGDPSHSEMKEIYSMLDRMAKTLLDS 603
+GD H + KEIY ML+ + L ++
Sbjct: 567 IGDKFHPQNKEIYKMLEEIDSLLAET 592
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 222/427 (51%), Gaps = 12/427 (2%)
Query: 115 VKTGLEFDTYVCNSIMD---MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE 171
+K GL Y + ++D + + +F + + + +SWN I GH
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 172 DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNAL 230
A++++ M L P+ T +C K + GK+IH I L + +L
Sbjct: 61 SALNLYVYMIS-LGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSL 119
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+ MY + G + +A ++FD +++V+ +T+M++GY + G ++KA+ +FD P++D+V W
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWN 179
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
AMI+GY + R+ EA+ LF EM + +KPD+ + +L+ C G +E G+ IH +I+ +
Sbjct: 180 AMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNH 239
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ + ALI++Y+KCG +E+A +F L+ KD SW ++I G A +AL +F
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ-IQPKLEHYGCLIDLLG 469
+M+ G P+D+T + +L AC+H G +D GR + + + I LID+
Sbjct: 300 QEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYA 359
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK--IESKDS 527
+ G ++ A ++ I N++ + A++ ++G D L + ++K IE D
Sbjct: 360 KCGNIEAANQVFDTILNKS----LSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDI 415
Query: 528 SFHTLLA 534
+F LL+
Sbjct: 416 TFVGLLS 422
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/556 (23%), Positives = 242/556 (43%), Gaps = 112/556 (20%)
Query: 5 KQIQAQIFQIGLQ--------------QNPETLNKLMVFCT---------------HPSH 35
KQI AQI + GL QN + VF T + S
Sbjct: 98 KQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASR 157
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GN+ A+K+F I ++++N +I +A+ G ++++L LF+++ + V PD T V
Sbjct: 158 GNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVL 217
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
G V+ G ++H ++ G + + N+++D+Y G++ LF+ + KDV+
Sbjct: 218 STCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVI 277
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G+ ++A+ VF+ M + P++ T++S L AC L +++G+ IH Y
Sbjct: 278 SWNTLIGGYAYINHHKEALLVFQEMLK-LGETPNDVTMLSILPACAHLGAIDIGRWIHVY 336
Query: 216 INQELE---FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
I+++L+ + +L+DMY KCG + A ++FD + NK++ +M+ G+ G+ +
Sbjct: 337 IDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRAD 396
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
A DL R M+ ++PD V LL+ C+
Sbjct: 397 AAFDLLSR-------------------------------MKKDGIEPDDITFVGLLSACS 425
Query: 333 QLGALEQGKWIHGYIN-ENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASW 390
G + G+ I + + RI +I++ + GL ++A E+ + E D W
Sbjct: 426 HAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIW 485
Query: 391 TSIICGLAMNGKINKALE---------------------LFSQMISGGAKPDDITFIGVL 429
S++ KI+K LE L S + + A+ DD+ + L
Sbjct: 486 GSLLKAC----KIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTL 541
Query: 430 ---------SACSH---GGLVDE---GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
CS +V E G +F E+Y++ +++ LL G +
Sbjct: 542 LNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEID------SLLAETGFV 595
Query: 475 DEAEELIRKIPNENNE 490
+ E+++++ E E
Sbjct: 596 SDTSEVLQEMEEELKE 611
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 363/592 (61%), Gaps = 7/592 (1%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ + ++GL+ + N L+ F + G + K+F + ++++ LI ++
Sbjct: 151 QVHGAVLKMGLEGDIFVSNSLIHF--YAECGKVDLGRKLFDGMLERNVVSWTSLINGYSG 208
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+ ++++ LF ++ E GV P+ T V A L +++ G+KV Y+ + G+E T +
Sbjct: 209 RDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIM 268
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N+++DMY G IC +++FDE +K++V +N +S +V D + + M Q
Sbjct: 269 VNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQK-G 327
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEAR 244
PD+ T++ST++AC L +L +GK H Y+ LE + NA++DMY KCG A
Sbjct: 328 PRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAAC 387
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
++F+ MPNK V+ W S+++G V G +E A +FD RD+V W MI VQ + F+E
Sbjct: 388 KVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEE 447
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A+ LFREMQ + D+ +V + + C LGAL+ KW+ YI +N I VD + TAL++
Sbjct: 448 AIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVD 507
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
M+++CG A+ +F + ++D ++WT+ I +AM G A+ELF++M+ KPDD+
Sbjct: 508 MFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVV 567
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ +L+ACSHGG VD+GR+ F +M + + I+P + HYGC++DLLGRAGLL+EA +LI+ +
Sbjct: 568 FVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSM 627
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P E N+++ +G+LL+ACR + NV++ A L ++ + H LL+NIYASA +W
Sbjct: 628 PIEPNDVV---WGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWT 684
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
DV VR +MKE GV+KVPG SSIE+ G+IHEF GD SH+E I ML+ +
Sbjct: 685 DVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEI 736
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 144/279 (51%), Gaps = 12/279 (4%)
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC------WTSMVSGYVNCGQLEK- 273
E PI N+ + C L E ++L +M K ++C +++ V G LE
Sbjct: 19 EANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESL 78
Query: 274 --ARDLF--DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
AR+ F D + + ++ +I GY D+A+ L+ +M ++ + PDK+ LL+
Sbjct: 79 DYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLS 138
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C+++ AL +G +HG + + + D V+ +LI YA+CG ++ ++F + E++ S
Sbjct: 139 ACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVS 198
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
WTS+I G + +A+ LF QM G +P+ +T + V+SAC+ ++ G++ + ++
Sbjct: 199 WTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYIS 258
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
E+ ++ L+D+ + G + A ++ + N+N
Sbjct: 259 EL-GMELSTIMVNALVDMYMKCGDICAARQIFDECANKN 296
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/656 (35%), Positives = 368/656 (56%), Gaps = 81/656 (12%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G + ++L+ F TH ++ Y +IF I++ +N++I+A+ + S +
Sbjct: 5 GFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFT 64
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
L+ + + DN+TYP + +A + ++VH +V+K G + D YV N++++ +
Sbjct: 65 LYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFS 124
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR------------- 181
V + + ++F+E D VSWN ++G+++ E+A ++ +M
Sbjct: 125 VCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVL 184
Query: 182 --------QGCNL----------------------------------MPDEGTVVSTLSA 199
+ C L M G +V + A
Sbjct: 185 FGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVA 244
Query: 200 CTALKN------LELGKEIH---------RYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
+AL + +GK IH YIN + NAL+ MY KCG + AR
Sbjct: 245 VSALSACANLLVVNMGKLIHSLSLKIGTESYIN--------LQNALIYMYSKCGDIMVAR 296
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+LFDE ++I W SM+SGY+ C ++ A+ +FD P +D+V W++MI+GY Q + FDE
Sbjct: 297 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 356
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
+ALF+EMQ+ KPD+ LV++++ CA+L ALEQGKW+H YI N +T++ ++ T LI+
Sbjct: 357 TLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLID 416
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY KCG +E ALE+FY + EK ++W ++I GLAMNG + +L++FS M P++IT
Sbjct: 417 MYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEIT 476
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+GVL AC H GLVDEG+ F +M ++IQP ++HYGC++DLLGRAG L EAEEL+ ++
Sbjct: 477 FMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRM 536
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P + V +GALL AC+ +G+ +MG ++ L +++ FH LL+NIYAS +W+
Sbjct: 537 PMTPD---VATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWD 593
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
DV +R M + V K+PGCS IE NG+IHEFL GD +H +M I ML MA L
Sbjct: 594 DVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL 649
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/627 (37%), Positives = 366/627 (58%), Gaps = 72/627 (11%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ ++ I AQ+ + GL L+KL+ FC P YA +F +IQ P LL +N +
Sbjct: 2 SSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ A +L L+ + G+ PD++T+PF+ K+ K+G+++HG+V+K G +
Sbjct: 62 RGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFD 121
Query: 121 FDTYVCNSIMDMYGVLGK-------------------------------ICNVKKLFDEM 149
D YV S++ MY G+ I + +KLFDE+
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P KDVVSWN ISG+V+ +++A+++F+ M N+ PDE T+V+ +SAC ++ELG
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241
Query: 210 KEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ +H +IN + + + NAL+D+Y K G
Sbjct: 242 RHVHSWINDHGFASNLKIVNALIDLYSKFG------------------------------ 271
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
++E A +LFD +D++ W +I GY N + EA+ LF+EM P+ ++++L
Sbjct: 272 -EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 330
Query: 329 TGCAQLGALEQGKWIHGYINENR---ITVDAVVATALIEMYAKCGLIEKALEIF-YELRE 384
CA LGA++ G+WIH YIN+ +T + + T+LI+MYAKCG I+ A ++F +
Sbjct: 331 PACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSN 390
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
+ ++W ++I G AM+G+ N A ++FS+M G +PDDITF+G+LSACSH G++D GR
Sbjct: 391 RSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNI 450
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
F +MT Y+I PKLEHYGC+IDLLG +GL EAEE+I +P E + +I + +LL AC+
Sbjct: 451 FRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVI---WCSLLKACK 507
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV-RKVPG 563
I+GN+++GE A L KIE +S + LL+NIYA+A RW +V +R + + G+ +KVPG
Sbjct: 508 IHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPG 567
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIY 590
CSSIEI+ ++HEF++GD H + +EIY
Sbjct: 568 CSSIEIDSVVHEFIIGDKLHPQNREIY 594
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/569 (37%), Positives = 352/569 (61%), Gaps = 6/569 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +K++ A + GL ++K+ + +L++A K+F I+SP +N L+
Sbjct: 324 MEAVKKLHAHLVVSGLHNCQYAMSKV-IRSYALQQSDLVFAHKVFEQIESPTTFLWNTLL 382
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ A+ + + +++ + K +E+G+ PDN T+PFV KA K+GE++H +V+K G
Sbjct: 383 RGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFL 442
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V NS++ +Y G + + +FDEM KDVVSWN I G+ + RF++ + +F M
Sbjct: 443 LDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELM 502
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
Q + D+ T+V +SACT L + + + RYI + +E +GN L+D YC+ G
Sbjct: 503 -QAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQ 561
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L A ++F +M +KN + +M+ Y G L A+ +FD+ P +D++ W++MI Y Q
Sbjct: 562 LQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQA 621
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ F +++ LFR+MQ ++KPD ++ ++L+ CA LGAL+ GKWIH Y+ N I D ++
Sbjct: 622 SHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIME 681
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+LI+M+AKCG +++AL++F E+ EKD SW SII GLA NG ++AL +F M++ G +
Sbjct: 682 NSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPR 741
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+++TF+GVL AC++ LV EG F M V+ ++P+++HYGC++ +L RAG L++A+
Sbjct: 742 PNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKN 801
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
I ++P + ++ + LL AC+ +GNV + E L +++ +S + LL+NIYAS
Sbjct: 802 FINEMPLAPDPVV---WRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLLSNIYAS 858
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
A+RW D NVRQ M + VRK P CS ++
Sbjct: 859 ADRWSDALNVRQWMADTAVRKSPACSVVD 887
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 199/315 (63%), Gaps = 4/315 (1%)
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
MP KNV+ W +++G+ G++E AR LFD+ P R++V WT +I+GY + + EAVALF
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
R M + P + ++A++ + LG + G+ +HGY + I DA V +LI++YAK
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 370 GLIEKALEIFYE-LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
G ++ +L++F E L ++ SWTSII G AM+G +ALELF++M G +P+ ITF+ V
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSV 180
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
++ACSHGGLV++G FF +M Y I P+++H+GC+ID+LGRAG L EAE++I +P E
Sbjct: 181 INACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEV 240
Query: 489 NEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTN 548
N I+ + LL C YG V+MG++ ++ +E + +L+N+ R+ D
Sbjct: 241 NVIV---WRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQ 297
Query: 549 VRQKMKEMGVRKVPG 563
R+ + E + KVPG
Sbjct: 298 ARKLLDERKIVKVPG 312
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/590 (22%), Positives = 264/590 (44%), Gaps = 65/590 (11%)
Query: 36 GNLLYAEKIFGSIQSPC--LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPF 93
G + YA +F Q PC ++++ LI + + + +++ LF + G+SP T
Sbjct: 20 GEIEYARLLFD--QMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLA 77
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD-K 152
V A+ LG + GE +HGY VK G+ D V NS++D+Y +G + N K+FDEM D +
Sbjct: 78 VVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRR 137
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
++VSW ISG +A+++F MR+ + P+ T +S ++AC+ +E G
Sbjct: 138 NLVSWTSIISGFAMHGLSVEALELFAEMRRA-GIRPNRITFLSVINACSHGGLVEQGLAF 196
Query: 213 HRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCG 269
+ + E P + + ++DM + G L EA ++ + +P + NVI W ++ G
Sbjct: 197 FKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYG 256
Query: 270 QLEKARDL------FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
++E + +R D + + ++N +F+ ++A L E +I+++ P +
Sbjct: 257 EVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKV-PGLAL 315
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA-KCGLIEKALEIFYEL 382
+V +E K +H ++ + + + +I YA + + A ++F ++
Sbjct: 316 VVT-----RSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQI 370
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
W +++ GLA + A+ + + G KPD++TF VL AC+ EG
Sbjct: 371 ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGE 430
Query: 443 RFFNT------MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI----- 491
+ + + +++ + Y DL+ + DE L++ + + N+ I
Sbjct: 431 QMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEM--LVKDVVSWNSLIGGYSQ 488
Query: 492 ------IVPLYGAL---------------LSACRIYGNVDMGEKLAALLEKIESK-DSSF 529
++ L+ + +SAC G+ M + + +E+ + D
Sbjct: 489 RNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYL 548
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
L + Y + + V +MK+ +++ +N +IH + G
Sbjct: 549 GNTLIDYYCRIGQLQSAEKVFSQMKDK--------NTVTLNAMIHAYAKG 590
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 179/396 (45%), Gaps = 74/396 (18%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N ++ + G+I + LFD+MP ++VVSW I G+ + + +AV +FR M G +
Sbjct: 10 NVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAG-GI 68
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARE 245
P E TV++ + A + L + +G+ +H Y + + + +GN+L+D+Y K G + + +
Sbjct: 69 SPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLK 128
Query: 246 LFDEMPN-KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+FDEM + +N++ WTS++SG+ AM V E
Sbjct: 129 VFDEMLDRRNLVSWTSIISGF-------------------------AMHGLSV------E 157
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALI 363
A+ LF EM+ ++P++ ++++ C+ G +EQG + + E I + +I
Sbjct: 158 ALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCII 217
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+M + G + +A II GL + + I
Sbjct: 218 DMLGRAGRLCEA---------------EQIIEGLPVEVNV-------------------I 243
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+ +L CS G V+ G+R ++++ + + L ++L G +AE+ RK
Sbjct: 244 VWRILLGCCSKYGEVEMGKRAIKMISDLERESGG--DFAVLSNVLNELGRFSDAEQ-ARK 300
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ +E + VP G L R + ++ +KL A L
Sbjct: 301 LLDERKIVKVP--GLALVVTRSFVMMEAVKKLHAHL 334
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/638 (37%), Positives = 369/638 (57%), Gaps = 73/638 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYNL 58
+ LKQI + I + GL +KL+ FC +L YA +F SI Q P + +N
Sbjct: 38 IPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNT 97
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
LI+A + + SL LFS++ G+ P++ T+P +FK+ + +++H + +K
Sbjct: 98 LIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLA 157
Query: 119 LEFDTYVCNSIMDMYGVLGK-------------------------------ICNVKKLFD 147
L +V S++ MY +G+ + + ++LFD
Sbjct: 158 LHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFD 217
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
E+P KDVVSWN I+G+V+ RFE+A+ F RM++ ++ P++ T+VS LSAC L++LE
Sbjct: 218 EIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEA-DVSPNQSTMVSVLSACGHLRSLE 276
Query: 208 LGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
LGK I ++ ++ + NAL+DMY KC
Sbjct: 277 LGKWIGSWVRDRGFGKNLQLVNALVDMYSKC----------------------------- 307
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G++ AR LFD +D++LW MI GY + ++EA+ LF M + P+ +A
Sbjct: 308 --GEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLA 365
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAV----VATALIEMYAKCGLIEKALEIFYEL 382
+L CA LGAL+ GKW+H YI++N V + T++I MYAKCG +E A ++F +
Sbjct: 366 VLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSM 425
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+ ASW ++I GLAMNG +AL LF +MI+ G +PDDITF+GVLSAC+ G V+ G
Sbjct: 426 GSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGH 485
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
R+F++M + Y I PKL+HYGC+IDLL R+G DEA+ L+ + E + I +G+LL+A
Sbjct: 486 RYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAI---WGSLLNA 542
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
CRI+G V+ GE +A L ++E ++S + LL+NIYA A RW+DV +R K+ + G++KVP
Sbjct: 543 CRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVP 602
Query: 563 GCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
GC+SIEI+G++HEFLVGD H + + I+ MLD + + L
Sbjct: 603 GCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLL 640
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/631 (38%), Positives = 372/631 (58%), Gaps = 70/631 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ I AQ+ +IGL L+KL+ FC P L YA +F +IQ P LL +N +
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A +L L+ + G+ P+++T+PFV K+ K+G+++HG+V+K G
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 120 EFDTYVCNSIMDMY-------------------------------GVLGKICNVKKLFDE 148
+ D YV S++ MY G I N +KLFDE
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KDVVSWN ISG+ + +++A+++F+ M + N+ PDE T+V+ +SAC ++EL
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIEL 284
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H +I+ + + + NAL+D+Y KCG
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCG----------------------------- 315
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+LE A LF+R P +D++ W +I GY N + EA+ LF+EM P+ ++++
Sbjct: 316 --ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 328 LTGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
L CA LGA++ G+WIH YI++ +T + + T+LI+MYAKCG IE A ++F + K
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+SW ++I G AM+G+ + + +LFS+M G +PDDITF+G+LSACSH G++D GR F
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 493
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
TMT+ Y++ PKLEHYGC+IDLLG +GL EAEE+I + E + +I + +LL AC++
Sbjct: 494 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI---WCSLLKACKM 550
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+GNV++GE A L KIE ++ + LL+NIYASA RW +V R + + G++KVPGCS
Sbjct: 551 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
SIEI+ ++HEF++GD H +EIY ML+ M
Sbjct: 611 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/625 (37%), Positives = 365/625 (58%), Gaps = 70/625 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ I AQ+ + GL L++L+ FC P+ L YA +F +IQ P LL +N +
Sbjct: 15 LQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTM 74
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A ++ L+ + G+ P+++T+PF+ K+ L K+G+++HG+V+K G
Sbjct: 75 FRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGY 134
Query: 120 EFDTYVCNSIMDMY-------------------------------GVLGKICNVKKLFDE 148
E D YV S++ MY G I + +K+FDE
Sbjct: 135 ELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDE 194
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KDVVSWN ISG+ ++A+D+F+ M + N+ PDE T+V+ +SAC +++L
Sbjct: 195 IPVKDVVSWNAIISGYADTGNNKEALDLFKEMMK-TNVKPDESTMVTVVSACAQSGSIQL 253
Query: 209 GKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H +I+ L + NAL+D+Y KCG
Sbjct: 254 GRQVHSWIDDHGLGSNLKIVNALIDLYSKCG----------------------------- 284
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
++E A LF +D++ W MI GY N + EA+ LF+EM P+ ++++
Sbjct: 285 --EVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSI 342
Query: 328 LTGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
L CAQLGA++ G+WIH YI++ +T + + T+LI+MYAKCG IE A ++F + +
Sbjct: 343 LPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHR 402
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
++ ++I G AM+G+ N A ++FS+M G +PDDITF+G+LSACSH G++D GRR F
Sbjct: 403 TLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIF 462
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+MT+ Y+I PKLEHYGC+IDLLG GL EAEE+I + E + +I + +LL AC++
Sbjct: 463 RSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVI---WCSLLKACKM 519
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+GNV++GE A L KIE ++ + LL+NIYA+A RW +V N+R + + G++KVPGCS
Sbjct: 520 HGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCS 579
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIY 590
SIEI+ ++HEF++GD H +EIY
Sbjct: 580 SIEIDSVVHEFIIGDKFHPRNREIY 604
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 358/625 (57%), Gaps = 71/625 (11%)
Query: 8 QAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
AQ+ + GL L+KL+ C P L YA +F + Q P LL +N +++ A
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
L ++ ++ G P+ +T+PF+ K+ ++G ++H V+K G E D Y
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 127 NSIMDMYGVLGKI-----------------C--------------NVKKLFDEMPDKDVV 155
S++ MY G++ C + +K+FD + ++DVV
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I+G+V+ +E+A+++F+ M + N+ PDEGT+VS LSAC ++ELG+EIH
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMR-TNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 216 INQELEFTPIMG--NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
++ F + NA + +Y KCG +E
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCG-------------------------------DVEI 269
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
A LF+ +D+V W +I GY N + EA+ LF+EM P+ ++++L CA
Sbjct: 270 ASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 329
Query: 334 LGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
LGA++ G+WIH YI++ +T + + T+LI+MYAKCG IE A ++F + K +SW
Sbjct: 330 LGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWN 389
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
++I G AM+G+ N A +LFS+M G +PDDIT +G+LSACSH GL+D GR F ++T+
Sbjct: 390 AMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQD 449
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
Y I PKLEHYGC+IDLLG AGL EAEE+I +P E + +I + +LL AC+++GN+++
Sbjct: 450 YNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVI---WCSLLKACKMHGNLEL 506
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
E A L +IE ++S + LL+NIYA+A RWEDV +R+ + G++KVPGCSSIEI+
Sbjct: 507 AESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDS 566
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRM 596
++HEF++GD H + +EIY ML+ M
Sbjct: 567 VVHEFIIGDKLHPQSREIYRMLEEM 591
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 366/625 (58%), Gaps = 70/625 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ I A++ + GL L+KL+ F P L YA +F SIQ P LL +N +
Sbjct: 15 LQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTM 74
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A +L L+ + G+ P+++T+PF+ KA ++G+++HG+V+K G
Sbjct: 75 FRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGC 134
Query: 120 EFDTYVCNSIMDMY-------------------------------GVLGKICNVKKLFDE 148
+ D YV S++ MY G I + +K+FDE
Sbjct: 135 DLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDE 194
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KDVVSWN ISG+ + +++A+++F+ M + N+ PDE T+V+ LSAC ++EL
Sbjct: 195 IPVKDVVSWNALISGYAETGNYKEALELFKEMMK-TNVKPDESTMVTVLSACAQSASIEL 253
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H +I+ + + + NAL+D+Y KC
Sbjct: 254 GRQVHSWIDDHGFGSNLKIVNALIDLYIKC------------------------------ 283
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G++E A LF+ +D++ W +I GY N + EA+ LF+EM P++ ++++
Sbjct: 284 -GEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSI 342
Query: 328 LTGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
L CA LGA++ G+WIH YI++ ++ + + T+LI+MYAKCG IE A ++F + +
Sbjct: 343 LPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+SW ++I G AM+G+ N A ++FS+M G +PDDITF+G+LSACSH G++D GR F
Sbjct: 403 SLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIF 462
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+MTE Y+I PKLEHYGC+IDLLG +GL EAEE+I + + + +I + +LL AC++
Sbjct: 463 RSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVI---WCSLLKACKM 519
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+GNV++GE A L KIE K+S + LL+NIYA+A RW +V R + + G++KVPGCS
Sbjct: 520 HGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCS 579
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIY 590
SIEI+ ++HEF++GD H +EIY
Sbjct: 580 SIEIDSVVHEFIIGDKLHPRNREIY 604
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/598 (40%), Positives = 356/598 (59%), Gaps = 7/598 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQIQA I GL ++L+ FC G++ YA IF + P +N +I
Sbjct: 65 MFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMI 124
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K + K F ++ D+ ++ F KA G E G VH + K G +
Sbjct: 125 KGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFD 184
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V N ++ Y G + +++FDE KDVV+W I+G+ + ++A+ +F M
Sbjct: 185 SDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSM 244
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGC 239
++ P+E T+++ LSAC+ + E+GK +H +I +++ + + NA+LDMY KCGC
Sbjct: 245 LSS-DVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGC 303
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L+ ARE+F+ M ++V WTS+++GY G L AR LFD P R+IV W AMI GY Q
Sbjct: 304 LTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQN 363
Query: 300 NRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIH-GYINENRITVDAV 357
++ EA+ LF M ++ L P + LV +L+ QLG LE G+ IH ++N+ I V +
Sbjct: 364 SQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLI 423
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ A+++MYAKCG I+ A ++F+ + EK+ SW S+I A G KAL LF QMI G
Sbjct: 424 LKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSG 483
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
KPD ITFIGVLSACS+GG V EG+ F +M + ++PK EHY C++DLL R GLL EA
Sbjct: 484 LKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEA 543
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
ELI ++P E +E +GALL ACR +GNV+M + L +++ +DS ++LLANI
Sbjct: 544 YELISRMPMEASE---GGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANIC 600
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
A +W+DV VR+ M+E GV+KVPG S IEI G HEFLV D SH+ EIY +++
Sbjct: 601 ADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVVNE 658
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/631 (37%), Positives = 364/631 (57%), Gaps = 70/631 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQI +QI + GL L+KL+ FC HG+L YA +F +I++P + +N +I
Sbjct: 41 LQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMI 100
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + S +L + + G P+ +T+P +FK+ + +G++VH +V+K GLE
Sbjct: 101 RGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLE 160
Query: 121 FDTYVCNSIMDMYGVLGKICNVK-------------------------------KLFDEM 149
+ +V S+++MY G++ N + +LFDE+
Sbjct: 161 HNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEI 220
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT-ALKNLEL 208
P +DVVSWN ISG+ + R E+A+ F MR+ + P+ T++S LSAC + +L+L
Sbjct: 221 PVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRA-KVTPNVSTMLSVLSACAQSGSSLQL 279
Query: 209 GKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G + +I ++ L + N L+DMY KC
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKC------------------------------ 309
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G LE+A +LF++ +++V W MI GY + + EA+ LFR M + P+ +++
Sbjct: 310 -GDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSI 368
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVA--TALIEMYAKCGLIEKALEIFYELREK 385
L CA LGAL+ GKW+H Y+++N ++ VA T+LI+MYAKCG + A IF + K
Sbjct: 369 LPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK 428
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
A+W ++I G AM+G + AL LFS+M S G PDDITF+GVL+AC H GL+ GRR+F
Sbjct: 429 SLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYF 488
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
++M + Y++ PKL HYGC+IDL GRAGL DEAE L++ + + + I + +LL ACRI
Sbjct: 489 SSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAI---WCSLLGACRI 545
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ +++ E +A L ++E ++ S + LL+NIYA A RWEDV +R ++ + ++KVPGCS
Sbjct: 546 HRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCS 605
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
SIE++ ++HEFLVGD H + EIY MLD +
Sbjct: 606 SIEVDSVVHEFLVGDKVHPQSNEIYKMLDEI 636
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/594 (39%), Positives = 351/594 (59%), Gaps = 44/594 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLL--YAEKIFGSIQSPCLLAYNLLI 60
+QI AQ+ GL + +K+M F +G+ Y E+ + S +N LI
Sbjct: 21 FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRLGS---FPFNSLI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + ++ ++ ++ G PD FT+P + KA ++G +VHG VVK GL
Sbjct: 78 NGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLL 137
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D YV NS++ YG G K+FDEM +DVVSWN ISG +K F++A+ VF RM
Sbjct: 138 ADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRM 197
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
++ P T+VS L+AC +L GK IH I + + ++GNA+LDMY K GC
Sbjct: 198 ----DVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLDMYVKNGCF 253
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
E A+++FD P RDIV WT MI G VQ +
Sbjct: 254 YE-------------------------------AKNIFDELPTRDIVSWTIMITGLVQSD 282
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+++ LF M+ + + PD IL ++L+ CA LG L+ G W+H YIN+ I D + T
Sbjct: 283 HPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGT 342
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
A+++MYAKCG IE AL+IFY + +++ +W +++CGLAM+G +++AL LF MI G KP
Sbjct: 343 AIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKP 402
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
++ITF+ +L+AC H GLVDEGR++F+ M+++Y + PKLEHYGC+IDL RAGLL+EA EL
Sbjct: 403 NEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVEL 462
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
R +P + + +I +G LL+AC GN+++ ++ + +++ DS LL+NI A
Sbjct: 463 ARTMPMKPDVLI---WGLLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAIN 519
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
RW +VT +R+ MK+ GVRK PG S IE++G HEF+VGD SH + +EIY +L+
Sbjct: 520 QRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLN 573
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/620 (37%), Positives = 357/620 (57%), Gaps = 9/620 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMV-FCTHPS---HGNLLYAEKIFGSIQSPCLLAY 56
+ L QI A + G ++L+ +CT + G L +A ++F I P Y
Sbjct: 23 IQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIPEPDRFMY 82
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N L++A++ +++L L + +RG+ P+ FT PFV KA + V+ HG VVK
Sbjct: 83 NTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAAHGVVVK 142
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G +V N+++ + G + + ++ F EM D++VVSWN I G+ + +A +
Sbjct: 143 LGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEVSEACAL 202
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYC 235
F MR L+ D T+VS L AC++ NLE+G+ +H + I+GNALLDMY
Sbjct: 203 FGEMRHQ-GLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYG 261
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG L A FD MP KNV+ WTSM+ G ++ RD F++ P R+IV W AMI+
Sbjct: 262 KCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISC 321
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
YVQ R E + L+ M+ + + PD+F L +L+ C Q G L GK IH Y+ +N
Sbjct: 322 YVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPG 381
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ +L++MYA+CG ++ A+ +F E+ K+ SW II LAM+G+ + + F M+S
Sbjct: 382 VTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVS 441
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
PD+ITF+G+LSACSHGGL++ G +F M VY ++P++EHYGC++DLLGR G L
Sbjct: 442 DAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLA 501
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+A LI+ + + + ++ +GALL ACRI+GNV++G+ + L ++E L+ N
Sbjct: 502 KAVNLIKDMSIKPDVVV---WGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICN 558
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
++ N+WED+ +R+ MKE G +K G SSIE+ IIHEF V D H EIY+ +D+
Sbjct: 559 LFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEFGVEDLRHESTNEIYAAVDQ 618
Query: 596 MAKTLLDSKQNAMEGDNLVA 615
++ L+ A++ + L+
Sbjct: 619 LSYHLVSLHVLAVQPEELIG 638
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/533 (38%), Positives = 341/533 (63%), Gaps = 5/533 (0%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
+L++A K+F I++P +N+LI+ A+ + ++ + K + G+ PDN T+PF+ K
Sbjct: 36 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 95
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A + + +GE++H ++ K GL D +V NS++ +Y G +C + +FDEM KDVVS
Sbjct: 96 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVS 155
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN I G+ +C RF+D + +F+ M Q + D+ T++ +SACT L + + + RYI
Sbjct: 156 WNSLICGYSQCNRFKDILALFKLM-QNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYI 214
Query: 217 NQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+E +GN L+D + + G L A ++F M +N++ +M++ Y + AR
Sbjct: 215 EDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSAR 274
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+FD+ P +D++ W++MI+GY Q N F +A+ +FR+MQ ++KPD ++ ++++ CA LG
Sbjct: 275 KIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLG 334
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
AL+ GKW+H Y+ N I D ++ +LI+MY KCG ++AL++F E++EKD SW SII
Sbjct: 335 ALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIII 394
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
GLA NG ++L LF M++ G +P+ +TF+GVL AC++ LV+EG F +M +Y ++
Sbjct: 395 GLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLE 454
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P+++HYGC++DLLGRAG L++A I ++P + + ++ + LL +C +G+V + E +
Sbjct: 455 PQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVV---WRILLGSCNTHGDVAIAEIV 511
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
L ++E +S +TLL+N YASA+RW + NVRQ M + VRK PGCS++E
Sbjct: 512 TKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 564
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 191/425 (44%), Gaps = 70/425 (16%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLG-KICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+++H Y + +GL Y + ++ Y +L + K+FD++ WN+ I G +
Sbjct: 5 KRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ 64
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI- 225
DA+ F + QG ++PD T L AC + L G+++H +I + + I
Sbjct: 65 SDAPADAI-AFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIF 123
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ N+L+ +Y CG L AR +FDEM K+V+ W S++ GY C
Sbjct: 124 VSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQC----------------- 166
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
NRF + +ALF+ MQ +K DK ++ +++ C +LG ++
Sbjct: 167 --------------NRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVR 212
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR---------------------- 383
YI + I VD + L++ + + G ++ A ++F+ ++
Sbjct: 213 YIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVS 272
Query: 384 ---------EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
+KD SW+S+I G + + ALE+F QM KPD I V+S+C+H
Sbjct: 273 ARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAH 332
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NE 490
G +D G ++ + I+ LID+ + G EA ++ +++ ++ N
Sbjct: 333 LGALDLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNS 391
Query: 491 IIVPL 495
II+ L
Sbjct: 392 IIIGL 396
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 201/435 (46%), Gaps = 72/435 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ I ++GL + N L+ + + GNL YA +F + ++++N LI ++
Sbjct: 107 EQMHNHITKLGLLSDIFVSNSLIHL--YAACGNLCYARSVFDEMVVKDVVSWNSLICGYS 164
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ F+ L LF ++ GV D T V A LG+ + + Y+ +E D Y
Sbjct: 165 QCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVY 224
Query: 125 VCNSIMDMYGVLGK-------------------------------ICNVKKLFDEMPDKD 153
+ N+++D +G G+ I + +K+FD++P KD
Sbjct: 225 LGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKD 284
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
++SW+ ISG+ + F DA+++FR+M Q + PD + S +S+C L L+LGK +H
Sbjct: 285 LISWSSMISGYSQANHFSDALEIFRQM-QRAKVKPDAIVIASVVSSCAHLGALDLGKWVH 343
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
Y+ + ++ IM N+L+DMY KCG EA ++F EM K+ + W S++ G N G E
Sbjct: 344 EYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNG-FE 402
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
K E++ LF+ M +P+ + +L CA
Sbjct: 403 K------------------------------ESLNLFQAMLTEGFRPNGVTFLGVLIACA 432
Query: 333 QLGALEQGKWIHGYINENRI-TVDAVVAT--ALIEMYAKCGLIEKALEIFYELR-EKDAA 388
+E+G + + + R+ +++ + ++++ + G +EKAL E+ + D
Sbjct: 433 NAKLVEEG--LDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPV 490
Query: 389 SWTSIICGLAMNGKI 403
W ++ +G +
Sbjct: 491 VWRILLGSCNTHGDV 505
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/606 (39%), Positives = 364/606 (60%), Gaps = 48/606 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL----LAY 56
+ LKQI A + GL + L+K+ F ++ + + F + L L Y
Sbjct: 18 IRSLKQIHAHLIASGLLHDEFVLSKVSEFFGK----HIGFVDYAFDFLNQTDLHVGTLPY 73
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N LI A+A + + + L++ ++ G PD +T+P V KA V++GE+VHG VK
Sbjct: 74 NTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVK 133
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G D YV NS++ Y V GK ++FDEM +DVVSW ISG+V+ F++A+++
Sbjct: 134 MGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINL 193
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
F +M +++P+ T VS L AC + L +GK +H + + ++GNAL+DMY
Sbjct: 194 FLKM----DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYV 249
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KC CL E AR LFD P RDIV WT++I+G
Sbjct: 250 KCECLCE-------------------------------ARKLFDELPDRDIVSWTSIISG 278
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
VQ + +++ LF +MQI ++PD+ IL ++L+ CA LGAL+ G+W+ YI I D
Sbjct: 279 LVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWD 338
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ TAL++MYAKCG IE AL IF + ++ +W +++ GLAM+G ++AL+ F MI
Sbjct: 339 IHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIG 398
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM-TEVYQIQPKLEHYGCLIDLLGRAGLL 474
G +P+++TF+ +L+AC H GLV EGR +F M ++ + P+LEHYGC+IDLL RAGLL
Sbjct: 399 AGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLL 458
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
DEA + IR +P + +I +GALLSAC+ GNV++ +++ + L +++S+DS + LL+
Sbjct: 459 DEAYKFIRNMPLPPDVLI---WGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLS 515
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA+ RW+DVT VR+ MK+ G+RK PG S IE++G HEFLVGD +HS ++I+ +L+
Sbjct: 516 NIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLN 575
Query: 595 RMAKTL 600
+A +
Sbjct: 576 ILANQV 581
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/595 (38%), Positives = 363/595 (61%), Gaps = 14/595 (2%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ + ++GL+++ N L+ F C H HG+ K+F + ++++ LI
Sbjct: 152 QVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGH-----KVFEGMSERNVVSWTSLICG 206
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+A+ ++++ LF ++ E G+ P + T V A L ++ GE+V Y+ + GL+ +
Sbjct: 207 YARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLN 266
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+ N+++DMY G I K+LFDE D+++V +N +S + + +A+ + M Q
Sbjct: 267 KVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ 326
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLS 241
PD T++S +SA L +L GK H Y I LE +GN ++DMY KCG
Sbjct: 327 Q-GPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPE 385
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
A +FD M NK V+ W S+ +G++ G +E A ++F++ P R+ V W MI+G VQ +
Sbjct: 386 MACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSL 445
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
F++A+ LFREMQ +K D+ ++ + + C LGA E KW+H YI +N I D + TA
Sbjct: 446 FEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTA 505
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++M+A+CG + A+++F ++ E+D ++WT+ I +AM G A LF+QM+ G KPD
Sbjct: 506 LVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPD 565
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+ F+ VL+ACSHGG V++G F+ M E + I P++EHYGC++DLLGRAGLL EA +LI
Sbjct: 566 VVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLI 624
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+ +P E N+++ +G+LL+ACR++ NV+M A + ++ + + H LL+NIYASA
Sbjct: 625 KSMPMEPNDVV---WGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAG 681
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+W DV VR ++E GVRKVPG SS+++NG+IHEF GD SH EM I ML M
Sbjct: 682 KWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEM 736
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 266/560 (47%), Gaps = 78/560 (13%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTH-PSHGNLLYAEKIFGSIQ-----SPCLL 54
+ QLKQ+ QI + GL Q P TL KL+ S +L YA K F + L
Sbjct: 38 LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALF 97
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
N LI+ ++ G R+++LL+ ++ GV+P+++T+PFV + +G +VHG V
Sbjct: 98 MLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSV 157
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
VK GLE D ++ N ++ Y G + + K+F+ M +++VVSW I G+ + R ++AV
Sbjct: 158 VKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAV 217
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDM 233
+F M + + P T+V +SAC L++L++G+ + YI + L+ +M NAL+DM
Sbjct: 218 SLFFEMVEA-GIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDM 276
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG + A+ LFDE ++N++ + +++S Y AR R
Sbjct: 277 YMKCGAIDAAKRLFDECVDRNLVLYNTILSNY--------ARQGLAR------------- 315
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
EA+A+ EM +PD+ +++ ++ AQL L GK HGY+ N +
Sbjct: 316 ----------EALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLE 365
Query: 354 VDAVVATALIEMYAKCGL-------------------------------IEKALEIFYEL 382
+ +I+MY KCG +E A E+F ++
Sbjct: 366 GWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQI 425
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
E++A W ++I GL A+ELF +M G K D +T +G+ SAC + G E
Sbjct: 426 PERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLG-APELA 484
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
++ +T E I + L+D+ R G A ++ K+ + V + A +
Sbjct: 485 KWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERD----VSAWTAAIGT 540
Query: 503 CRIYGNVDMGEKLAALLEKI 522
+ GN GE L ++
Sbjct: 541 MAMEGN---GEGATGLFNQM 557
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 163/335 (48%), Gaps = 23/335 (6%)
Query: 221 EFTPIMGNALLDMYCKC-GCLSEARELFDEMPNKNVICWTSMVSGYVNCG-------QLE 272
E P+ ++ L+ +C L++ ++L ++ + S ++ VN G L+
Sbjct: 18 EADPMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLD 77
Query: 273 KARDLFD--RSPVRD---IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
AR F+ + VR + + ++I GY EA+ L+ M ++ + P+ + +
Sbjct: 78 YARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFV 137
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+GC ++ A +G +HG + + + D + LI YA+CG ++ ++F + E++
Sbjct: 138 LSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNV 197
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SWTS+ICG A + +A+ LF +M+ G +P +T + V+SAC+ +D G R
Sbjct: 198 VSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAY 257
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
+ E+ K+ L+D+ + G +D A+ L + + N + LY +LS Y
Sbjct: 258 IGELGLKLNKV-MVNALVDMYMKCGAIDAAKRLFDECVDRN----LVLYNTILSN---YA 309
Query: 508 NVDMGEKLAALLEKI--ESKDSSFHTLLANIYASA 540
+ + A+L+++ + T+L+ I ASA
Sbjct: 310 RQGLAREALAILDEMLQQGPRPDRVTMLSAISASA 344
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/624 (37%), Positives = 362/624 (58%), Gaps = 70/624 (11%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L+ I AQ+ + GL L+KL+ FC P L YA +F +IQ P LL +N +
Sbjct: 1 SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ A +L L+ + G+ P+ +T+PF+ K+ ++G+++HG+V+K G +
Sbjct: 61 RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120
Query: 121 FDTYVCNSIMDMY---GVL----------------------------GKICNVKKLFDEM 149
D YV S++ MY G L G I + +K+FDE+
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 180
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P KDVVSWN ISG+ + ++A+++F+ M + N+ PDE T+VS +SAC ++ELG
Sbjct: 181 PIKDVVSWNAMISGYAETGNNKEALELFKEMMK-TNVRPDESTMVSVVSACAQSASIELG 239
Query: 210 KEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+++H +I+ + + + NAL+D+Y KC
Sbjct: 240 RQVHSWIDDHGFGSNLKIVNALIDLYIKC------------------------------- 268
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G++E A LF+ +D++ W +I GY N + EA+ LF+EM P+ ++++L
Sbjct: 269 GEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSIL 328
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVA--TALIEMYAKCGLIEKALEIFYELREKD 386
CA LGA+E G+WIH YIN+ V + T+LI+MYAKCG IE A ++F + +
Sbjct: 329 PACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRS 388
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+SW ++I G AM+G+ N A ++FS+M +PDDITF+G+LSACSH G++D GR F
Sbjct: 389 LSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR 448
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+M E Y+I PKLEHYGC+IDLLG +GL EAEE+I + E + +I + +LL AC+++
Sbjct: 449 SMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVI---WCSLLKACKMH 505
Query: 507 GNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
GNV++GE A L KIE K+ + LL+NIYA+A RW +V +R + + G++KVPGCSS
Sbjct: 506 GNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSS 565
Query: 567 IEINGIIHEFLVGDPSHSEMKEIY 590
IEI+ ++HEF++GD H +EIY
Sbjct: 566 IEIDSVVHEFIIGDKFHPRNREIY 589
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/631 (36%), Positives = 367/631 (58%), Gaps = 70/631 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ I AQ+ + GL L+KL+ C P L YA +F +IQ P LL +N +
Sbjct: 46 LQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTM 105
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A +L L+ + G+ P+++T+PF+ K+ K+G+++HG+V+K G
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGY 165
Query: 120 EFDTYVCNSIMDMY-------------------------------GVLGKICNVKKLFDE 148
+ D +V S++ +Y G I + +KLFDE
Sbjct: 166 DLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDE 225
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KDVVSWN ISG+ + +++A+++F+ M + N+ PDE T+V+ +SAC ++EL
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKEMMK-TNIRPDESTMVTVVSACAQSGSIEL 284
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H +I+ + + + N+L+D+Y KCG
Sbjct: 285 GRQVHSWIDDHGFGSNLKIVNSLMDLYSKCG----------------------------- 315
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+LE A LF+ +D++ W +I GY N + EA+ LF+EM +P+ ++++
Sbjct: 316 --ELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSI 373
Query: 328 LTGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
L CA LGA++ G+WIH YI++ T + + T+LI+MYAKCG IE A ++F + K
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+SW ++I G AM+G+ + A ++FS+M G +PDDITF+G+LSACS G++D GR F
Sbjct: 434 SLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIF 493
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
TMT+ Y+I PKLEHYGC+IDLLG +GL EAEE+I + E + +I + +LL AC+I
Sbjct: 494 RTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVI---WCSLLKACKI 550
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
GNV++GE A L KIE ++ + LL+NIYA+A RW +V +R + + G++KVPGCS
Sbjct: 551 RGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCS 610
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
SIEI+ ++HEF++GD H +EIY ML+ M
Sbjct: 611 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/630 (36%), Positives = 374/630 (59%), Gaps = 43/630 (6%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ +I + G +N N LM + G L ++F + ++++N +I +
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGL--YSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVL 211
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
KG +R++L LF ++ GV PD T + L +++ G+++H Y+V L +
Sbjct: 212 KGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSL 271
Query: 126 CNSIMDMYGVLGKI---------CN------------------------VKKLFDEMPDK 152
N ++DMY GK+ C+ ++LFD+M ++
Sbjct: 272 LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNER 331
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
+VSW +SG+V+ + +++++F++MR N++PDE +V+ LSAC L++ +LG+ +
Sbjct: 332 SLVSWTTMMSGYVQGGYYCESLELFQQMRFE-NVIPDEVALVTVLSACVHLEDFDLGRSV 390
Query: 213 HRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H +I + +GNALLD+Y KCG L EA F+++P K+ W SM+ G+ G +
Sbjct: 391 HAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGV 450
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+KARD F++ P +DIV W M+N YV+ + F+E+ +F +MQ +KPDK L++LL+ C
Sbjct: 451 DKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSC 510
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
A++GAL G W++ YI +N I +DA++ TALI+MY KCG +E A EIF ++ EK+ WT
Sbjct: 511 AKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWT 570
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+++ AM G+ +A++L+ +M G KPD +TFI +L+ACSHGGLVDEG ++FN +
Sbjct: 571 AMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSF 630
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
Y I P + HYGC++DLLGR G L+E + I ++P E + V ++ +L+ ACR + NV++
Sbjct: 631 YNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPD---VSIWSSLMRACRSHHNVEL 687
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
E+ L +I+ ++ H LL+NIYA A RW+DV+ VR K+ E GV K PG + IE NG
Sbjct: 688 AEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNG 747
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
++HEF+ + + +I ML + + LL
Sbjct: 748 VVHEFVASNLVSA---DILCMLQDIERRLL 774
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 284/539 (52%), Gaps = 42/539 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+ I A + L +PE ++++ F S NL A +I P + +N L++
Sbjct: 50 EFSPIHAHLITANLIHDPEITSQVLAFLL--SVNNLDCAHQILSYSHEPESIIWNTLLEN 107
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
K+G ++ L + + +GV D T+ F+ A +VK G +VHG ++K G +
Sbjct: 108 KLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRN 167
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+ N++M +Y GK+ V +LF++M +DV+SWN IS +V + +A+D+F M
Sbjct: 168 KSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLV 227
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLS 241
++PDE T+VS +S C LK+LE+GK +H YI + +L + N L+DMY KCG +
Sbjct: 228 S-GVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMD 286
Query: 242 EARELFDEMPNK--NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
EA L +V+ WT++VSGYV +++KAR LFD+ R +V WT M++GYVQ
Sbjct: 287 EAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQG 346
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ E++ LF++M+ + PD+ LV +L+ C L + G+ +H +I + VD +
Sbjct: 347 GYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLG 406
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA------------- 406
AL+++YAKCG +++AL F +L K AASW S++ G +G ++KA
Sbjct: 407 NALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIV 466
Query: 407 ------------------LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
E+F +M S KPD T I +LS+C+ G ++ G + N
Sbjct: 467 SWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHG-IWVNVY 525
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
E +I LID+ G+ G ++ A E+ +I +N V ++ A+++A + G
Sbjct: 526 IEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKN----VFVWTAMMAAYAMEG 580
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 211/491 (42%), Gaps = 76/491 (15%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+++ +H +++ L D + + ++ + + ++ + + + WN +
Sbjct: 48 IREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLEN 107
Query: 164 HVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
+K ++ ++ + M QG ++ D T + AC +++LG E+H I
Sbjct: 108 KLKEGCPQEVLECYYHMVTQG--VLLDISTFHFLIHACCKNFDVKLGSEVHGRI------ 159
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
KCG F + N +++ Y CG+L++ LF++
Sbjct: 160 ------------LKCG--------FGRNKSLN----NNLMGLYSKCGKLKEVCQLFEKMT 195
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RD++ W MI+ YV + EA+ LF EM + + PD+ +V+L++ CA+L LE GK
Sbjct: 196 HRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKR 255
Query: 343 IHGYINENRITVDAVVATALIEMYAKCG-------------------------------- 370
+H YI +N++ + + L++MY+KCG
Sbjct: 256 LHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKS 315
Query: 371 -LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
I+KA ++F ++ E+ SWT+++ G G ++LELF QM PD++ + VL
Sbjct: 316 NKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVL 375
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
SAC H D GR + Y + L+DL + G LDEA ++P ++
Sbjct: 376 SACVHLEDFDLGRS-VHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS- 433
Query: 490 EIIVPLYGALLSA-CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTN 548
+ ++L CR G VD K KI KD + N Y + + +
Sbjct: 434 ---AASWNSMLDGFCR-SGGVD---KARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFE 486
Query: 549 VRQKMKEMGVR 559
+ KM+ V+
Sbjct: 487 IFCKMQSSNVK 497
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/533 (38%), Positives = 341/533 (63%), Gaps = 5/533 (0%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
+L++A K+F I++P +N+LI+ A+ + ++ + K + G+ PDN T+PF+ K
Sbjct: 501 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 560
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A + + +GE++H ++ K GL D +V NS++ +Y G +C + +FDEM KDVVS
Sbjct: 561 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVS 620
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN I G+ +C RF+D + +F+ M Q + D+ T++ +SACT L + + + RYI
Sbjct: 621 WNSLICGYSQCNRFKDILALFKLM-QNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYI 679
Query: 217 NQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+E +GN L+D + + G L A ++F M +N++ +M++ Y + AR
Sbjct: 680 EDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSAR 739
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+FD+ P +D++ W++MI+GY Q N F +A+ +FR+MQ ++KPD ++ ++++ CA LG
Sbjct: 740 KIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLG 799
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
AL+ GKW+H Y+ N I D ++ +LI+MY KCG ++AL++F E++EKD SW SII
Sbjct: 800 ALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIII 859
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
GLA NG ++L LF M++ G +P+ +TF+GVL AC++ LV+EG F +M +Y ++
Sbjct: 860 GLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLE 919
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P+++HYGC++DLLGRAG L++A I ++P + + ++ + LL +C +G+V + E +
Sbjct: 920 PQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVV---WRILLGSCNTHGDVAIAEIV 976
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
L ++E +S +TLL+N YASA+RW + NVRQ M + VRK PGCS++E
Sbjct: 977 TKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 1029
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 234/410 (57%), Gaps = 11/410 (2%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++FD P W+ + + +DA+ +FR R + D L AC L
Sbjct: 49 QVFDRRP----TPWHALLKAYSHGPHPQDALQLFRHARW--HAADDTYAFTFALKACAGL 102
Query: 204 KNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
++H + ++ EF + AL+++Y CGCL+++R F+EMP KN + W ++
Sbjct: 103 GWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVI 162
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
+G+ G++E AR LF+R P R++V W+ MI+GY + R EAVALFR M + P +
Sbjct: 163 TGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEI 222
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE- 381
++A++ + +G + G+ +HGY + + D V +LI++YAK G I+ +L +F E
Sbjct: 223 TVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEM 282
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
L ++ SWTSII G AM+G KA+ELF+ M G +P+ ITF+ VL ACSHGGLV++G
Sbjct: 283 LDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQG 342
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
FF +M Y I P ++H+GC+ID+LGRAG L EAE++IR P E N + + LL
Sbjct: 343 VAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATV---WRTLLG 399
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
C YG V+MGE+ + +E + +L+N+ R+ D VR+
Sbjct: 400 CCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRK 449
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 202/435 (46%), Gaps = 72/435 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ I ++GL + N L+ + + GNL YA +F + ++++N LI ++
Sbjct: 572 EQMHNHITKLGLLSDIFVSNSLIHL--YAACGNLCYARSVFDEMVVKDVVSWNSLICGYS 629
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ F+ L LF ++ GV D T V A LG+ + + Y+ +E D Y
Sbjct: 630 QCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVY 689
Query: 125 VCNSIMDMYGVLGK-------------------------------ICNVKKLFDEMPDKD 153
+ N+++D +G G+ I + +K+FD++P KD
Sbjct: 690 LGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKD 749
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
++SW+ ISG+ + F DA+++FR+M Q + PD + S +S+C L L+LGK +H
Sbjct: 750 LISWSSMISGYSQANHFSDALEIFRQM-QRAKVKPDAIVIASVVSSCAHLGALDLGKWVH 808
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
Y+ + ++ IM N+L+DMY KCG EA ++F EM K+ + W S++ G N
Sbjct: 809 EYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLAN----- 863
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
NG+ + E++ LF+ M +P+ + +L CA
Sbjct: 864 ---------------------NGFEK-----ESLNLFQAMLTEGFRPNGVTFLGVLIACA 897
Query: 333 QLGALEQGKWIHGYINENRI-TVDAVVAT--ALIEMYAKCGLIEKALEIFYELR-EKDAA 388
+E+G + + + R+ +++ + ++++ + G +EKAL E+ + D
Sbjct: 898 NAKLVEEG--LDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPV 955
Query: 389 SWTSIICGLAMNGKI 403
W ++ +G +
Sbjct: 956 VWRILLGSCNTHGDV 970
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 187/400 (46%), Gaps = 72/400 (18%)
Query: 39 LYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
L A ++F +P ++ L+KA++ + +L LF R + D + + F KA
Sbjct: 45 LIAHQVFDRRPTP----WHALLKAYSHGPHPQDALQLFRHARWHA-ADDTYAFTFALKAC 99
Query: 99 GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
LG + ++HG VV+ G EF TYV +++++Y + G + + + F+EMP K+ VSWN
Sbjct: 100 AGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWN 159
Query: 159 VSIS-------------------------------GHVKCMRFEDAVDVFRRMRQGCNLM 187
V I+ G+ + R +AV +FRRM +
Sbjct: 160 VVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRM-MAEGIS 218
Query: 188 PDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEAREL 246
P E TV++ + A + + + +G+ +H Y +E L + +GN+L+D+Y K G + + +
Sbjct: 219 PSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRV 278
Query: 247 FDEMPN-KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
FDEM + +N++ WTS++SG+ G K A
Sbjct: 279 FDEMLDRRNLVSWTSIISGFAMHGLSVK-------------------------------A 307
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIE 364
V LF +M+ ++P++ +++L C+ G +EQG + I E I D +I+
Sbjct: 308 VELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIID 367
Query: 365 MYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
M + G + +A +I + E +A W +++ + G++
Sbjct: 368 MLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEV 407
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 203/422 (48%), Gaps = 15/422 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + YA +F + +++++ +I + + +++ LF ++ G+SP T V
Sbjct: 169 GEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVV 228
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD-KDV 154
A+ +G++ GE +HGY K GL +D V NS++D+Y +G I N ++FDEM D +++
Sbjct: 229 PALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNL 288
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSW ISG AV++F MR+ + P+ T +S L AC+ +E G +
Sbjct: 289 VSWTSIISGFAMHGLSVKAVELFADMRRA-GIRPNRITFLSVLHACSHGGLVEQGVAFFK 347
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQL 271
+ E P + + ++DM + G L EA ++ + P + N W +++ G++
Sbjct: 348 SMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEV 407
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
E + +R+ + + L +V + + F + +I+R D+ V
Sbjct: 408 E----MGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSFFNI 463
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYA--KCGLIEKALEIFYELREKDAAS 389
++ A+++ +H Y + + + ++ YA + L+ A ++F ++
Sbjct: 464 VRMEAIKR---LHAYYIVSGLYNCHYAMSKVLRSYAILQPDLV-FAHKVFDQIEAPTTFL 519
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W +I GLA + A+ + + GG PD++TF +L AC+ ++EG + N +T
Sbjct: 520 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 579
Query: 450 EV 451
++
Sbjct: 580 KL 581
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/625 (37%), Positives = 361/625 (57%), Gaps = 70/625 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ I AQ+ + GL L+KL+ FC P L YA +F +IQ P LL +N +
Sbjct: 15 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTM 74
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A +L L+ + G+ P+ +T+PF+ K+ ++G+++HG+V+K G
Sbjct: 75 FRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGY 134
Query: 120 EFDTYVCNSIMDMY---GVL----------------------------GKICNVKKLFDE 148
+ D YV S++ MY G L G I + +K+FDE
Sbjct: 135 DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDE 194
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KDVVSWN ISG+ + ++A+++F+ M + N+ PDE T+VS +SAC ++EL
Sbjct: 195 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMK-TNVRPDESTMVSVVSACAQSASIEL 253
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H +I+ + + + NAL+D+Y KC
Sbjct: 254 GRQVHSWIDDHGFGSNLKIVNALIDLYIKC------------------------------ 283
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G++E A LF+ +D++ W +I GY N + EA+ LF+EM P+ ++++
Sbjct: 284 -GEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSI 342
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVA--TALIEMYAKCGLIEKALEIFYELREK 385
L CA LGA+E G+WIH YIN+ V + T+LI+MYAKCG IE A ++F + +
Sbjct: 343 LPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNR 402
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+SW ++I G AM+G+ N A ++FS+M +PDDITF+G+LSACSH G++D GR F
Sbjct: 403 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIF 462
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+M E Y+I PKLEHYGC+IDLLG +GL EAEE+I + E + +I + +LL AC++
Sbjct: 463 RSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVI---WCSLLKACKM 519
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
Y NV++GE A L KIE K+ + LL+NIYA+A RW +V +R + + G++KVPGCS
Sbjct: 520 YANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCS 579
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIY 590
SIEI+ ++HEF++GD H +EIY
Sbjct: 580 SIEIDSVVHEFIIGDKFHPRNREIY 604
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 352/598 (58%), Gaps = 36/598 (6%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L+Q+ A + + +P ++ + YA IF I P AYN++I+
Sbjct: 37 LQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGL 96
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
A K S +LLLF K+ E+ V D FT+ V KA + +++GE+VH ++K+G + +
Sbjct: 97 AFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNE 156
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N+++ MY G+I + +FD MP++ +V+WN +SG+ K +++ V +FR++ +
Sbjct: 157 FVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILE- 215
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
+ D+ T++S L AC L NLE+G+ I YI ++ L + +L+DMY K
Sbjct: 216 LRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAK------ 269
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
CGQ++ AR LFD RD+V W+AMI+GY Q +R
Sbjct: 270 -------------------------CGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRC 304
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ LF EMQ + P++ +V++L CA LGA E GKW+H YI + ++ + + T L
Sbjct: 305 KEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQL 364
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+ YAKCG I++++E+F E+ K+ +WT++I GLA NG+ ALE FS M+ KP+D
Sbjct: 365 IDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPND 424
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+TFIGVLSACSH LVD+GR FN+M + I+P++EHYGC++D+LGRAG L+EA + I
Sbjct: 425 VTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFID 484
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P N ++ + LL++CR + N++M EK + ++E S + LL+N YA R
Sbjct: 485 NMPFPPNAVV---WRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGR 541
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
ED VR +KE ++K+PGCS IE++G++HEF D H KEI+ LD+M K +
Sbjct: 542 VEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQI 599
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 357/576 (61%), Gaps = 12/576 (2%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ A + + L +P ++ + + S NL A +F I+ P L+ +N +I+ +
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDV-IRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLS 92
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ +++ +++++ +G++ +N T F+FKA + ++ G K+H + +K G E +
Sbjct: 93 QSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLF 152
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V N+++ MY + G++ +K+FD M D+D+VSWN I G+ + ++++ + +F M
Sbjct: 153 VSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAM-TAA 211
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEA 243
N+ D T+V + AC+ L + E + +YI + LE +GN L+DMY + A
Sbjct: 212 NIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELA 271
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+ +FD M +N++ W ++V G+ G L AR LFD P RD++ WT+MI GY Q ++F
Sbjct: 272 QGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFS 331
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
+AV LF+EM ++KPDK + ++L+ CA LG L+ G +H YI + + D V +LI
Sbjct: 332 DAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLI 391
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MY KCG++EKALE+F+ +++KD+ SWTS+I GLA+NG N AL+LFSQM+ G +P
Sbjct: 392 DMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHG 451
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF+G+L AC+H GLV++G +F +M V+ + P ++HYGC++DLL R+G +D+A E I+K
Sbjct: 452 TFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKK 511
Query: 484 IPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
+P IVP ++ LLSAC+++GNV + E L +++ DS + LL+N YA
Sbjct: 512 MP------IVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGV 565
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+RW+D +R+ M++ V+K G SSIE++G++ +
Sbjct: 566 DRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMVSNY 601
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/602 (38%), Positives = 356/602 (59%), Gaps = 41/602 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+++ KQ A + + L NP +KL+ F G+L YA K+F +Q+P N +I
Sbjct: 24 ISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMI 83
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ +A+ + +++ L+ + ERGV DN+TYPFV A LG VK G + H V+K G
Sbjct: 84 RGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFG 143
Query: 121 FDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
D +V N+++ Y G G C+V FDE +DVV+WN+ I+ H+ E A D+
Sbjct: 144 SDLFVINALIQFYHNCGSFGCACDV---FDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCK 236
M + NL PDE T+VS + AC L NLE GK +H Y + L+ + NA+LDMYCK
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C +E A+++F+R +D++ WT+M++G
Sbjct: 261 CD-------------------------------DIESAQEVFNRIREKDVLSWTSMLSGL 289
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+ F EA+ALF++MQ+ +++ D+ LV +L+ CAQ GAL+QGK+IH I++ I D
Sbjct: 290 AKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDL 349
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ TAL++MYAKCG I+ AL++F +R ++ +W ++I GLAM+G A+ LF QM
Sbjct: 350 VLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHD 409
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
PDD+TFI +L ACSH GLVDEG F M +QI+P++EHYGC++DLL RA +D+
Sbjct: 410 KLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDD 469
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A I +P + N + L+ LL ACR G+ D+ EK+ + ++E + +L+N+
Sbjct: 470 ALAFIENMPIKANSV---LWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNL 526
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YA ++W+ +R++MK G+ K PGCS IE+NG+IH+F+ GD SH + ++IY+M++ M
Sbjct: 527 YAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEM 586
Query: 597 AK 598
+
Sbjct: 587 TR 588
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/625 (36%), Positives = 360/625 (57%), Gaps = 70/625 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ I AQ+ + GL L+KL+ C P L YA +F +IQ P LL +N +
Sbjct: 15 LQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTM 74
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A +L L+ + G+ P+++T+PF+ K+ K+G+++HG V+K G
Sbjct: 75 FRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGF 134
Query: 120 EFDTYVCNSIMDMY-------------------------------GVLGKICNVKKLFDE 148
+ D Y+ S++ MY G I + K+FDE
Sbjct: 135 DLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDE 194
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KDVVSWN ISG+ + +++A+++F++M + N+ PDE T+V+ LSAC ++EL
Sbjct: 195 IPVKDVVSWNAXISGYAETGNYKEALELFKKMMK-TNVRPDESTMVTVLSACAQSGSIEL 253
Query: 209 GKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H +IN + NAL+D+Y KCG
Sbjct: 254 GRQVHSWINDHGFGXNLKIVNALIDLYSKCG----------------------------- 284
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+LE A LF +D++ W +I GY N + EA+ LF++M KP+ ++++
Sbjct: 285 --ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSI 342
Query: 328 LTGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
L+ CA LGA++ G+WIH YI++ +T + + T+LI+MYAKCG IE A ++F + +
Sbjct: 343 LSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+SW ++I G AM+G+ N A ++FS+M G +PDDITF+G+LSACSH G++D GR F
Sbjct: 403 SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF 462
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+MT Y++ PKLEHYGC+IDL G +GL EAE++I + E + +I + +LL AC++
Sbjct: 463 RSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVI---WCSLLKACKM 519
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+GNV++GE A L KIE ++ + LL+NIYA+A RW +V R + + G++KVPGCS
Sbjct: 520 HGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCS 579
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIY 590
SIEI+ ++HEF++GD H +EIY
Sbjct: 580 SIEIDSVVHEFIIGDKFHPRNREIY 604
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/590 (39%), Positives = 353/590 (59%), Gaps = 68/590 (11%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LKQI +QI + GL L+KL+ FC GNL YA +F SI+ P +N +I+
Sbjct: 48 LKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ S ++ + ++ GV P+++T+PF+ K+ +G ++G+++HG+V+K GLE D
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167
Query: 124 YVCNSIMDMYGVLGKI-----------------------------C--NVKKLFDEMPDK 152
+V S+++MY G++ C + ++LF+E+P +
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
D VSWN I+G+ + RFE+A+ F+ M++ N+ P+E T+V+ LSAC +LELG +
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKR-ANVAPNESTMVTVLSACAQSGSLELGNWV 286
Query: 213 HRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
+I + L + NAL+DMY KCG L
Sbjct: 287 RSWIEDHGLGSNLRLVNALIDMYSKCG-------------------------------DL 315
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+KARDLF+ +DI+ W MI GY N + EA+ALFR+MQ ++P+ V++L C
Sbjct: 316 DKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPAC 375
Query: 332 AQLGALEQGKWIHGYINENRITV-DAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
A LGAL+ GKWIH YI++ + + + + T+LI+MYAKCG IE A ++F ++ K SW
Sbjct: 376 AYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW 435
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I GLAM+G N ALELF QM G +PDDITF+GVLSACSH GLV+ GR+ F++M E
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE 495
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
Y I PKL+HYGC+IDLLGRAGL DEAE L++ + + + I +G+LL ACR++GNV+
Sbjct: 496 DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAI---WGSLLGACRVHGNVE 552
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
+GE A L ++E ++ + LL+NIYA+A RW+DV +R K+ + G++K
Sbjct: 553 LGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/537 (42%), Positives = 337/537 (62%), Gaps = 26/537 (4%)
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEK-----VHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
G PD +T+P + KA +H +VVK G+E + + +S++ MY G
Sbjct: 46 GARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARG 105
Query: 138 KICNVKKLFD----EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
+ + + V WN ISGH + RFE + F M + + M T
Sbjct: 106 DGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRA-SAMATAVTY 164
Query: 194 VSTLSACTALKNLELGKEIHRYI-------NQELEFTPIMGNALLDMYCKCGCLSEAREL 246
VS LSAC K+L LG ++H+ + +Q +E NAL+DMY +CG + A L
Sbjct: 165 VSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVE------NALVDMYAECGDMDAAWVL 218
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
F+ M +++ WTS++SG V GQ+++ARDLFD P RD + WTAMI+GYVQ RF +A+
Sbjct: 219 FEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDAL 278
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
FR MQI +++ D+F +V+++T CAQLGALE G+W Y+ I +D V ALI+MY
Sbjct: 279 ETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMY 338
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
+KCG IE+AL++F ++ +D +WT+II GLA+NG+ +A+++F +M+ PD++TF+
Sbjct: 339 SKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFV 398
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
GVL+AC+H GLVD+GR FF +MTE Y I P + HYGCLID+LGRAG L EA + I K+P
Sbjct: 399 GVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPM 458
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
+ N I +G LL++CR+YGN ++GE A L +++ +S+ + LL+N+YA +NRW+DV
Sbjct: 459 KPNSTI---WGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDV 515
Query: 547 TNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+RQ + E G++K PGCS IE+NGIIHEF+ D SH KEIYS L+ + L ++
Sbjct: 516 RRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNA 572
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 192/436 (44%), Gaps = 78/436 (17%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL-------LAYNLL 59
I A + + G++ N + L+V + +++ CL + +N L
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVM-----YAARGDGAAARAVLEAACLATGGGAPVMWNAL 132
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I + G F S F + TY V A G ++ G +VH V+++G+
Sbjct: 133 ISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGV 192
Query: 120 EFDTYVCNSIMDMYG---------VL----------------------GKICNVKKLFDE 148
D V N+++DMY VL G++ + LFD
Sbjct: 193 LPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDH 252
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP++D ++W I G+V+ RF DA++ FR M Q C + DE T+VS ++AC L LE
Sbjct: 253 MPERDTIAWTAMIDGYVQVGRFRDALETFRYM-QICKVRADEFTMVSVVTACAQLGALET 311
Query: 209 GKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+ Y+ + ++ +GNAL+DMY KCG + A ++F +M N++ WT+++ G
Sbjct: 312 GEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAV 371
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G+ E+A D+F R + R +Q PD+ V +
Sbjct: 372 NGRGEEAIDMFYR---------------------------MLRALQ----TPDEVTFVGV 400
Query: 328 LTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELREK- 385
LT C G +++G+ + E I+ V LI++ + G +++AL+ ++ K
Sbjct: 401 LTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKP 460
Query: 386 DAASWTSIICGLAMNG 401
++ W +++ + G
Sbjct: 461 NSTIWGTLLASCRVYG 476
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 149/324 (45%), Gaps = 22/324 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +F + +A+ +I + + G FR +L F ++ V D FT V
Sbjct: 241 GQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVV 300
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG ++ GE Y+ + G++ D +V N+++DMY G I +F +M ++D
Sbjct: 301 TACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKF 360
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I G R E+A+D+F RM + PDE T V L+ACT ++ G+E
Sbjct: 361 TWTAIILGLAVNGRGEEAIDMFYRMLRALQ-TPDEVTFVGVLTACTHAGLVDKGREFFLS 419
Query: 216 INQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMPNK-NVICWTSM-----VSGYVN 267
+ + +P + L+D+ + G L EA + D+MP K N W ++ V G
Sbjct: 420 MTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSE 479
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G+L R L + P + + + N Y + NR+ + + R QII K +
Sbjct: 480 IGELAAER-LLELDP-DNSTAYILLSNMYAKSNRWKD---VRRIRQIIMEKG-----IKK 529
Query: 328 LTGCAQLGALEQGKWIHGYINENR 351
GC+ +E IH ++ +R
Sbjct: 530 EPGCSM---IEMNGIIHEFVAADR 550
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/606 (38%), Positives = 363/606 (59%), Gaps = 17/606 (2%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLK + AQI GL TL KL+ +L YA K+F I P +N LI
Sbjct: 49 LKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLR--DLRYAHKLFDQIPQPNKFMFNHLI 106
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG-----WLGEVKKGEKVHGYVV 115
K ++ KSLLL+ ++ G+ P+ FT PFV KA WLG VH
Sbjct: 107 KGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVC-----VHAQSF 161
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K G+ V N+I+++Y G I + +++FD++ ++ +VSWN I+G+ K R E+AV
Sbjct: 162 KLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVL 221
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMY 234
+FR M++ L PD T+V LS T N +LG+ +H + + +E I+ NAL+DMY
Sbjct: 222 MFREMQE-VGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMY 280
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KCG L A+ +FD+M +K+V+ WT M++ Y N G ++ A + F++ P +++V W ++I
Sbjct: 281 AKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIW 340
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
+VQ + EAV LF M + + LVA+L+ C+ +G L GK H YI +N IT+
Sbjct: 341 CHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITL 400
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
A + A+I+MYAKCG ++ A+++F+ + EK+A SW II LA++G +A+E+F +M
Sbjct: 401 SATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQ 460
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
+ G PD+ITF G+LSACSH GLVD G+ +F M + I P +EHY C++DLLGR GLL
Sbjct: 461 ASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLL 520
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EA LI+K+P + + ++ + ALL ACR YGN+ +G+++ L ++ +S + LL+
Sbjct: 521 GEAISLIKKMPVKPDVVV---WSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLS 577
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
N+Y+ + RW+D+ N+ + + + G++K S IEI+G ++F+V D H IYSML
Sbjct: 578 NMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLG 637
Query: 595 RMAKTL 600
++ L
Sbjct: 638 QLMDHL 643
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/600 (36%), Positives = 346/600 (57%), Gaps = 36/600 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
QLK I A++ ++ L Q+ LN ++ C G+ Y++ +F ++ P + +N +I
Sbjct: 29 FNQLKHIHARLLRLHLDQDNYLLN--LILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMI 86
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ K F ++ L+ +R G P+NFT PFV KA +V+ G K+H +VK G +
Sbjct: 87 RGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYD 146
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V S++ +Y + K+FD++PDK+VVSW I+G++ F +A+ F+++
Sbjct: 147 HDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ L PD ++V L+AC L + G+ I RYI+
Sbjct: 207 LE-MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYIS----------------------- 242
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
D +NV TS++ YV CG LE+A +F P +DIV W+ MI GY
Sbjct: 243 -------DSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNG 295
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+A+ LF +MQ LKPD + +V +L+ CA LGAL+ G W ++ N + V+ T
Sbjct: 296 LPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGT 355
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MY+KCG + +A EIF +++KD W +++ GL+MNG LFS + G +P
Sbjct: 356 ALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRP 415
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D+ TFIG+L C+HGG V+EGR+FFN M V+ + P +EHYGC++DLLGRAGLL+EA +L
Sbjct: 416 DENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQL 475
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P + N ++ +GALL C+++ + + E++ L ++E +S + L+NIY+
Sbjct: 476 INNMPMKPNAVV---WGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGN 532
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RWE+ +R MKE ++K+ CS IEI+GI+HEFLVGD SH ++IY+ LD + + L
Sbjct: 533 HRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGREL 592
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/600 (36%), Positives = 345/600 (57%), Gaps = 36/600 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
QLK I A++ ++ L Q+ LN ++ C G+ Y++ +F ++ P + +N +I
Sbjct: 29 FNQLKHIHARLLRLHLDQDNYLLN--LILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMI 86
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ K F ++ L+ +R G P+NFT PFV KA +V+ G K+H +VK G +
Sbjct: 87 RGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYD 146
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V S++ +Y + K+FD++PDK+VVSW I+G++ F +A+ F+++
Sbjct: 147 HDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ L PD ++V L+AC L + G+ I RYI+
Sbjct: 207 LE-MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYIS----------------------- 242
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
D +NV TS++ YV CG LE+A +F P +DIV W+ MI GY
Sbjct: 243 -------DSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNG 295
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+A+ LF +MQ LKPD + +V +L+ CA LGAL+ G W ++ N + V+ T
Sbjct: 296 LPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGT 355
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MY+KCG + +A EIF ++ KD W +++ GL+MNG LFS + G +P
Sbjct: 356 ALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRP 415
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D+ TFIG+L C+HGG V+EGR+FFN M V+ + P +EHYGC++DLLGRAGLL+EA +L
Sbjct: 416 DENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQL 475
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P + N ++ +GALL C+++ + + E++ L ++E +S + L+NIY+
Sbjct: 476 INNMPMKPNAVV---WGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGN 532
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RWE+ +R MKE ++K+ CS IEI+GI+HEFLVGD SH ++IY+ LD + + L
Sbjct: 533 HRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGREL 592
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/483 (44%), Positives = 314/483 (65%), Gaps = 21/483 (4%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
NS++ ++G+ G + KLFDEM +KD+V+W+ I+ + +E+A+ F M + +
Sbjct: 314 NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK-IGV 372
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHR---------YINQELEFTPIMGNALLDMYCKC 237
M DE VS LSAC L + +GK IH YIN + NAL+ MY KC
Sbjct: 373 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYIN--------LQNALIYMYSKC 424
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G + AR+LFDE ++I W SM+SGY+ C ++ A+ +FD P +D+V W++MI+GY
Sbjct: 425 GDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA 484
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q + FDE +ALF+EMQ+ KPD+ LV++++ CA+L ALEQGKW+H YI N +T++ +
Sbjct: 485 QNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 544
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ T LI+MY KCG +E ALE+FY + EK ++W ++I GLAMNG + +L++FS M
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 604
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
P++ITF+GVL AC H GLVDEG+ F +M ++IQP ++HYGC++DLLGRAG L EA
Sbjct: 605 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 664
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
EEL+ ++P + V +GALL AC+ +G+ +MG ++ L +++ FH LL+NIY
Sbjct: 665 EELLNRMPMTPD---VATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIY 721
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
AS +W+DV +R M + V K+PGCS IE NG+IHEFL GD +H +M I ML MA
Sbjct: 722 ASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMA 781
Query: 598 KTL 600
L
Sbjct: 782 MKL 784
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 207/517 (40%), Gaps = 137/517 (26%)
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ + S + L+ + + DN+TYP + +A + ++VH +V+K G
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGF- 244
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D DV N I+ C DA VF
Sbjct: 245 ------------------------------DSDVYVRNTLINCFSVCSNMTDACRVF--- 271
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+E +V+ ++S N++L Y + G +
Sbjct: 272 --------NESSVLDSVS----------------------------WNSILAGYIEIGNV 295
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
EA+ ++ +MP +++I SM+ + G + +A LFD +D+V W+A+I + Q
Sbjct: 296 EEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNE 355
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH---------GYIN--- 348
++EA+ F M I + D+ + V+ L+ CA L + GK IH YIN
Sbjct: 356 MYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQN 415
Query: 349 -------------------ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
+ +D + ++I Y KC L++ A IF + EKD S
Sbjct: 416 ALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVS 475
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF---- 445
W+S+I G A N ++ L LF +M G KPD+ T + V+SAC+ +++G+
Sbjct: 476 WSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIK 535
Query: 446 -----------NTMTEVY---------------QIQPKLEHYGCLIDLLGRAGLLDEAEE 479
T+ ++Y I+ + + LI L GL++ + +
Sbjct: 536 RNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLD 595
Query: 480 L---IRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
+ ++K NEI + +L ACR G VD G+
Sbjct: 596 MFSNMKKCHVTPNEIT---FMGVLGACRHMGLVDEGQ 629
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 184/428 (42%), Gaps = 66/428 (15%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G ++ A K+F + ++ ++ LI F + + +++ F + + GV D
Sbjct: 324 GLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL 383
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A L V G+ +H +K G E + N+++ MY G I +KLFDE D++
Sbjct: 384 SACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLI 443
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM------------------------------RQGCN 185
SWN ISG++KC ++A +F M Q
Sbjct: 444 SWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG 503
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEAR 244
PDE T+VS +SAC L LE GK +H YI + L I+G L+DMY KCGC+ A
Sbjct: 504 FKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETAL 563
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
E+F M K + W +++ G G +E + D+F
Sbjct: 564 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFS------------------------- 598
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALI 363
M+ + P++ + +L C +G +++G+ + I++++I + ++
Sbjct: 599 ------NMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMV 652
Query: 364 EMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++ + G +++A E+ + D A+W +++ +G + ++I +PD
Sbjct: 653 DLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDH 710
Query: 423 ITFIGVLS 430
F +LS
Sbjct: 711 DGFHVLLS 718
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 156/339 (46%), Gaps = 21/339 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A+ IF S+ +++++ +I +A+ F ++L LF +++ G PD T V A
Sbjct: 461 AKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACAR 520
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L +++G+ VH Y+ + GL + + +++DMY G + ++F M +K + +WN
Sbjct: 521 LAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNAL 580
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I G E ++D+F M++ C++ P+E T + L AC + ++ G+ + +
Sbjct: 581 ILGLAMNGLVESSLDMFSNMKK-CHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDH 639
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEK---- 273
+ P + + ++D+ + G L EA EL + MP +V W +++ G E
Sbjct: 640 KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 699
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
R L + P D + N Y ++D+ + + M R V + GC+
Sbjct: 700 GRKLIELQPDHD-GFHVLLSNIYASKGKWDDVLEIRGMMTKHR--------VLKIPGCSM 750
Query: 334 LGALEQGKWIHGYINENRITVDA-VVATALIEMYAKCGL 371
+E IH ++ ++ D + L+EM K L
Sbjct: 751 ---IEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKL 786
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/612 (37%), Positives = 352/612 (57%), Gaps = 7/612 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+L Q+ A + G+ + T L +C P+ G + YA ++F I P YN LI+A
Sbjct: 27 RLNQLHAHLVVHGV--DDVTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYNSLIRA 84
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ +++L L + RG+ P+ FT PF+ KA + + HG VVK G
Sbjct: 85 YCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQ 144
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V N+++ Y G + + ++ FDEM D++VVSWN I+G+ + +A +F MR+
Sbjct: 145 VFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRR 204
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLS 241
L+ DE T+VS L AC+A NLE GK +H ++ + I+ NAL+DMY KCG L
Sbjct: 205 Q-GLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLL 263
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
A FD MP KN + WTSM+ ++ ARD F++ P + I+ W AMI+ YVQ R
Sbjct: 264 MAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGR 323
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
F EA+ L+ M+++ L PD+F L A+L+ C QLG L GK IH I +N + +
Sbjct: 324 FHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNS 383
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MYA+CG ++ A+ +F E+ K+ SW +II LAM+G+ AL F M+S PD
Sbjct: 384 LLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPD 443
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+ITF+ +LSAC+HGGL++ G+ +F M VY ++P +EHY C++DLLGR G L +A +LI
Sbjct: 444 EITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLI 503
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+ +P + ++ +GALL ACRI+G++ +G+++ L ++E L++N+ +
Sbjct: 504 KDMPMRPDVVV---WGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETH 560
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
+WED+ +R+ M+E G++K G SSIE N IHE H ++Y DR+ L+
Sbjct: 561 QWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHESGAEGIGHESSDDMYVGDDRLPHHLV 620
Query: 602 DSKQNAMEGDNL 613
A+ D L
Sbjct: 621 FPNALAVPPDQL 632
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/608 (37%), Positives = 345/608 (56%), Gaps = 61/608 (10%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTH------------PSHGNLLYAEKIFGSIQS 50
++KQI A I + ++ TL ++ CT S NL YA +
Sbjct: 41 EIKQIHASIIKANTTRSTTTL-PIISLCTKITSLLQQDVHLADSIQNLWYASSLANFCHQ 99
Query: 51 PCLLAYNLLIKAFA-KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEK 109
+ +N +I++ + +F L+ ++ G+SPD +T P++ KA + +
Sbjct: 100 NPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQ 159
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H + +KTGL + +V N++M Y V G I V+K+FD+ P D++SW I + K
Sbjct: 160 IHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGY 219
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL---EFTPIM 226
+A+ F RM N D T+V LSAC+ L + LGK+I Y++ L +
Sbjct: 220 PSEAIAAFFRM----NCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFL 275
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
GNALLDMY KC GQ AR LF PV+++
Sbjct: 276 GNALLDMYLKC-------------------------------GQPHLARQLFHLMPVKNL 304
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V W +MI+G F EA+ +FR MQ + LKPD LV +L CA LG LE GKW+H Y
Sbjct: 305 VSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSY 364
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I++N + D VA AL++MYAKCG I++A +F ++ KD S+T++I G AM+GK ++A
Sbjct: 365 IDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRA 424
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L +FS+M G +PD +T +GVLSACSH GL++EGRR F M+ +Y +QP+ EHYGC++D
Sbjct: 425 LAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVD 484
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIE 523
LLGRAGL+ EAE K+P IVP ++G+LL AC+I+ V++GE + L ++E
Sbjct: 485 LLGRAGLISEAEAFTNKMP------IVPDASVWGSLLGACKIHAKVELGETVIQKLIEME 538
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
+ + L++NIY+SANRW D R+ MK+ ++K PGCSSIE++G++HEF G+ SH
Sbjct: 539 PERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEKSH 598
Query: 584 SEMKEIYS 591
+ +E+ S
Sbjct: 599 PKSREMIS 606
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/612 (36%), Positives = 351/612 (57%), Gaps = 7/612 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+L Q+ A + G+ + T L +C P+ G + YA ++F I P YN LI+A
Sbjct: 27 RLNQLHAHLVVHGV--DDVTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYNSLIRA 84
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ +++L L + RG+ P+ FT PF+ KA + + HG VVK G
Sbjct: 85 YCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQ 144
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V N+++ Y G + + ++ FDEM D++VVSWN I+G+ + +A +F MR+
Sbjct: 145 VFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRR 204
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLS 241
L+ DE T+VS L AC+A NLE GK +H ++ + I+ NAL+DMY KCG L
Sbjct: 205 Q-GLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLL 263
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
A FD MP KN + WTSM+ ++ ARD F++ P + I+ W AMI+ YVQ R
Sbjct: 264 MAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGR 323
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
F EA+ L+ M+++ L PD+F L A+L+ C QLG L GK IH I +N + +
Sbjct: 324 FHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNS 383
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MYA+CG ++ A+ +F E+ K+ SW +II LAM+G+ AL F M+ PD
Sbjct: 384 LLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPD 443
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+ITF+ +LSAC+HGGL++ G+ +F M VY ++P +EHY C++DLLGR G L +A +LI
Sbjct: 444 EITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLI 503
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+ +P + ++ +GALL ACRI+G++ +G+++ L ++E L++N+ +
Sbjct: 504 KDMPMRPDVVV---WGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETH 560
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
+WED+ +R+ M+E G++K G SSIE N IHE H ++Y DR+ L+
Sbjct: 561 QWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHESGAEGIGHESSDDMYVGDDRLPHHLV 620
Query: 602 DSKQNAMEGDNL 613
A+ D L
Sbjct: 621 FPNALAVPPDQL 632
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/641 (38%), Positives = 370/641 (57%), Gaps = 80/641 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC---LLAYN 57
+ KQI + I + GL +KL+ FC G+L YA +F Q + +N
Sbjct: 41 INTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWN 100
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+ ++ S SL LFS++ GV P++ T+PF+FK+ +G+++H + +K
Sbjct: 101 SLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKL 160
Query: 118 GLEFDTYVCNSIMDMYGVLGKI-----------------------------C--NVKKLF 146
L F+ +V S++ MY +G++ C + ++LF
Sbjct: 161 ALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLF 220
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
DE+P KDVVSWN ISG+V+ RFE+A+ F M++ N++P++ T+V LSAC ++
Sbjct: 221 DEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEA-NVLPNKSTMVVVLSACGHTRSG 279
Query: 207 ELGKEIHRYIN-----QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
ELGK I ++ L+ T NAL+DMYCKC
Sbjct: 280 ELGKWIGSWVRDNGFGSNLQLT----NALIDMYCKC------------------------ 311
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
G+ + AR+LFD +D++ W MI GY + ++EA+ALF M +KP+
Sbjct: 312 -------GETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPND 364
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFY 380
+ +L CA LGAL+ GKW+H YI++N R + +A + T+LI+MYAKCG IE A +F
Sbjct: 365 VTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFR 424
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVD 439
+ ++ ASW +++ G AM+G +AL LFS+M++ G +PDDITF+GVLSAC+ GLVD
Sbjct: 425 SMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVD 484
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
G ++F +M + Y I PKL+HYGC+IDLL RA +EAE L++ + E + I +G+L
Sbjct: 485 LGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAI---WGSL 541
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
LSAC+ +G V+ GE +A L ++E +++ LL+NIYA A RW+DV +R ++ + G++
Sbjct: 542 LSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMK 601
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
KVPGC+SIEI+G +HEFLVGD H E IY ML+ + K L
Sbjct: 602 KVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLL 642
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/553 (37%), Positives = 348/553 (62%), Gaps = 8/553 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
M +K++ A + GL ++K++ ++ H S +L+ A K+F I+SP +N L
Sbjct: 854 MEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQS--DLVSAHKVFKQIESPTTFLWNTL 911
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
++ A+ + + +++ + K +E+G+ PDN T+PFV KA K+GE++H +V+K G
Sbjct: 912 LRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGF 971
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++ +Y G + + +F+EM KDVVSWN I G+ + R ++ + +F+
Sbjct: 972 LLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKL 1031
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M Q + D+ T+V +SACT L + + + RYI + +E +GN L+D YC+ G
Sbjct: 1032 M-QAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIG 1090
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L A ++F +M +KN + +M++ Y G L A+ +FD+ P +D++ W++MI Y Q
Sbjct: 1091 QLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQ 1150
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ F +++ LFR+MQ ++KPD ++ ++L+ CA LGAL+ GKWIH Y+ N I D ++
Sbjct: 1151 ASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIM 1210
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+LI+M+AKCG +++AL++F ++ EKD SW SII GLA NG ++AL++F M++ G
Sbjct: 1211 ENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGP 1270
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+++TF+GVL AC++ LV+EG F M V+ ++P+++HYGC++D+L RAG L++A
Sbjct: 1271 RPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAV 1330
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
I ++P + ++ + LL ACR +GNV + E L +++ +S+ LL+NIYA
Sbjct: 1331 SFISEMPLAPDPVV---WRILLGACRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYA 1387
Query: 539 SANRWEDVTNVRQ 551
SA+RW D NVR+
Sbjct: 1388 SADRWSDAMNVRR 1400
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 244/420 (58%), Gaps = 11/420 (2%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
K+FD+ P W + + +A+ +F+ RQ +L D L AC L
Sbjct: 439 KVFDQSP----APWRAFLKAYSHGPFPLEALHLFKHARQ--HLADDTFVFTFVLKACAGL 492
Query: 204 KNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
G ++H + Q+ EF + AL+++Y CL EAR++FDEMP KNV+ W M+
Sbjct: 493 GWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMI 552
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
+G+ G++E AR LFD+ P R++V WT +I+GY + + EA+ L R M + P +
Sbjct: 553 TGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEI 612
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE- 381
++A++ + LG + G+ ++GY + I DA V +LI++YAK G ++ +L++F E
Sbjct: 613 TVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEM 672
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
L ++ SWTSII G AM+G +ALELF++M G KP+ ITF+ V++ACSHGGLV++G
Sbjct: 673 LDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQG 732
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
FF +M Y I P+++H+GC+ID+LGRAG L EAE++I +P E N V ++ LL
Sbjct: 733 LAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVN---VTVWRILLG 789
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
C YG V MGE+ ++ +E + +L+N+ R+ D R+ + + + K+
Sbjct: 790 CCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKL 849
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 201/425 (47%), Gaps = 33/425 (7%)
Query: 36 GNLLYAEKIFGSIQSPC--LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPF 93
G + YA +F Q PC ++++ LI + + + ++L L + G+SP T
Sbjct: 559 GEVEYARLLFD--QMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLA 616
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD-K 152
V A+ LG + GE ++GY K G+ D V NS++D+Y +G + N K+FDEM D +
Sbjct: 617 VIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRR 676
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
++VSW ISG +A+++F MR+ + P+ T +S ++AC+ +E G
Sbjct: 677 NLVSWTSIISGFAMHGLSVEALELFAEMRRA-GIKPNRITFLSVINACSHGGLVEQGLAF 735
Query: 213 HRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMV---SGYV 266
+ + E P + + ++DM + G L EA ++ + +P + NV W ++ S Y
Sbjct: 736 FKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYG 795
Query: 267 NCGQLEKARDL---FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
E+A + +R D + + ++ +F+ ++A L + +I++L
Sbjct: 796 EVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKL------ 849
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA--KCGLIEKALEIFYE 381
Q +E K +H ++ + + + +I +YA + L+ A ++F +
Sbjct: 850 ---------QEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVS-AHKVFKQ 899
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ W +++ GLA + A+ + + G KPD++TF VL AC+ EG
Sbjct: 900 IESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEG 959
Query: 442 RRFFN 446
+ N
Sbjct: 960 EQMHN 964
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 179/382 (46%), Gaps = 75/382 (19%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
T PS L K+F QSP + +KA++ ++L LF R+ ++ D F
Sbjct: 431 TPPSRTAL----KVFD--QSPA--PWRAFLKAYSHGPFPLEALHLFKHARQH-LADDTFV 481
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
+ FV KA LG + G ++H VV+ G EF YV +++++Y + + +K+FDEMP
Sbjct: 482 FTFVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMP 541
Query: 151 DKDVVSWNVSIS-------------------------------GHVKCMRFEDAVDVFRR 179
K+VVSWNV I+ G+ + + +A+ + R
Sbjct: 542 VKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRH 601
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCG 238
M G + P E TV++ + A + L + +G+ ++ Y ++ + +GN+L+D+Y K G
Sbjct: 602 MMAG-GISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIG 660
Query: 239 CLSEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
+ + ++FDEM +N++ WTS++SG+ AM V
Sbjct: 661 SVQNSLKVFDEMLDRRNLVSWTSIISGF-------------------------AMHGLSV 695
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDA 356
EA+ LF EM+ +KP++ ++++ C+ G +EQG + + E I +
Sbjct: 696 ------EALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEI 749
Query: 357 VVATALIEMYAKCGLIEKALEI 378
+I+M + G + +A +I
Sbjct: 750 KHFGCIIDMLGRAGRLCEAEQI 771
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/602 (37%), Positives = 352/602 (58%), Gaps = 70/602 (11%)
Query: 24 NKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER 82
+KL+ FC P YA +F +IQ P L +N +++ +A +L L+ +
Sbjct: 1 SKLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISL 60
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK---- 138
G+ P+++T+PF+ K+ ++G+++HG+V+K G E D YV S++ MY G+
Sbjct: 61 GLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDA 120
Query: 139 ---------------------------ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE 171
I + +++FDE+P KDVVSWN ISG+ + ++
Sbjct: 121 HKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK 180
Query: 172 DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNAL 230
+A+++F+ M + N+ PDEGT+V+ LSAC +++ELG+++H +I+ + + + NAL
Sbjct: 181 EALELFKEMMK-TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNAL 239
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+D+Y KCG Q+E A LF+ +D+V W
Sbjct: 240 IDLYSKCG-------------------------------QVETACGLFEGLSCKDVVSWN 268
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
+I GY N + EA+ LF+EM P+ +V++L CA LGA++ G+WIH YI++
Sbjct: 269 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKK 328
Query: 351 --RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+T + T+LI+MYAKCG IE A ++F + K +SW ++I G AM+G+ N +
Sbjct: 329 LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFD 388
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LFS+M G +PDDITF+G+LSACSH G +D GR F +MT+ Y I PKLEHYGC+IDLL
Sbjct: 389 LFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLL 448
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
G +GL EA+E+I+ +P E + +I + +LL ACR +GN+++ E A L K+E ++
Sbjct: 449 GHSGLFKEAKEMIKTMPMEPDGVI---WCSLLKACRRHGNLELAESFARNLMKVEPENPG 505
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+ LL+NIYA+A W++V VR + G++KVPGCSSIEI+ +HEF+VGD H +E
Sbjct: 506 SYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNRE 565
Query: 589 IY 590
IY
Sbjct: 566 IY 567
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 13/309 (4%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ + I G N + +N L+ + G + A +F + ++++N LI +
Sbjct: 218 RQVHSWIDDHGFGSNLKIVNALIDL--YSKCGQVETACGLFEGLSCKDVVSWNTLIGGYT 275
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT--GLEFD 122
++++LLLF ++ G SP++ T + A LG + G +H Y+ K +
Sbjct: 276 HMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNA 335
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+ S++DMY G I ++F+ M K + SWN I G R D+F RMR+
Sbjct: 336 PSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRK 395
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCL 240
+ PD+ T V LSAC+ L+LG+ I + + Q+ + TP + + ++D+ G
Sbjct: 396 N-GIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLF 454
Query: 241 SEARELFDEMP-NKNVICWTSMVSGYVNCGQLEK----ARDLFDRSPVRDIVLWTAMING 295
EA+E+ MP + + W S++ G LE AR+L P + + + N
Sbjct: 455 KEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEP-ENPGSYVLLSNI 513
Query: 296 YVQFNRFDE 304
Y +DE
Sbjct: 514 YATAGEWDE 522
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 112/235 (47%), Gaps = 19/235 (8%)
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
A+ +F ++E + W +++ G A++ AL+L+ MIS G P+ TF +L +C+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP 494
+EG++ + ++ +P L + LI + + G L++A ++ + + + V
Sbjct: 79 SKAFEEGQQIHGHVLKL-GYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD----VV 133
Query: 495 LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMK 554
Y AL++ GN+ ++ + ++I KD + + YA +++ + ++M
Sbjct: 134 SYTALITGYASSGNIRSAQE---MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM 190
Query: 555 EMGVRKVPG--------CS---SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
+ VR G C+ S+E+ +H ++ S +K + +++D +K
Sbjct: 191 KTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSK 245
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/609 (37%), Positives = 353/609 (57%), Gaps = 50/609 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHG-NLLYAEKIFGSIQSP---CLLAY 56
++ LKQI + P + KL+ + S +L Y I + CL
Sbjct: 19 ISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHSHDAQFCLSLC 78
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N +I++ ++ + +++ G+ PD FT P V KA+ + +++G+++H +K
Sbjct: 79 NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138
Query: 117 TGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
TG+ F+ YV N++M +Y V G I +V+K+FDE P +D+VSW I K + AV+
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVE 198
Query: 176 VFRRMRQGCNLM--PDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALL 231
F M C+L D T+V LSAC+ L +L LG+++H YI ++ +GNALL
Sbjct: 199 AFMEM---CDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALL 255
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
DMY KC L A +FD PV+++V W A
Sbjct: 256 DMYLKCD-------------------------------DLNSAYKVFDEMPVKNVVTWNA 284
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI+G R+ EA+ FR MQ +KPD+ LV +L CA LG LE GKW+H Y+ N
Sbjct: 285 MISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNH 344
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
I D V AL++MYAKCG I++A +F ++ +D S+T++I GLA++G+ N A ++FS
Sbjct: 345 ILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFS 404
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+M G +P+++TF+G+L ACSHGGLV EG+++F M++ Y+++P+ EHYGC+IDLLGRA
Sbjct: 405 EMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRA 464
Query: 472 GLLDEAEELIRKIPNENNEIIVPLY--GALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
GL+ EAEE+I K+ EI ++ GALL ACRI+GNVD+GE + L +++ +
Sbjct: 465 GLVKEAEEIIHKM-----EIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGT 519
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+ L+ N+Y+S +RW+D +R+ MK +RK PGCS IE++G++HEF GD SH K I
Sbjct: 520 YILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVI 579
Query: 590 YSMLDRMAK 598
+ ++ + K
Sbjct: 580 IANINLIKK 588
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/607 (35%), Positives = 352/607 (57%), Gaps = 37/607 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQ + ++GL Q+ +N L+ H + YA +F P + YN LI
Sbjct: 16 LHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQ--YATVVFAQTPHPNIFLYNTLI 73
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTGL 119
+ +FR ++ +++ +R+ G +PDNFT+PFV KA L G +H V+KTG
Sbjct: 74 RGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGF 133
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
++D +V ++ +Y G + + +K+FDE+P+K+VVSW I G+++ F +A+ +FR
Sbjct: 134 DWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRG 193
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
+ + L PD T+V L AC+ + +L G+ I Y+ + G+
Sbjct: 194 LLE-MGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRES-------GSV---------- 235
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
NV TS+V Y CG +E+AR +FD +D+V W+A+I GY
Sbjct: 236 -------------GNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASN 282
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
EA+ +F EMQ ++PD + +V + + C++LGALE G W G ++ + + V+
Sbjct: 283 GMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG 342
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TALI+ YAKCG + +A E+F +R KD + ++I GLAM G + A +F QM+ G +
Sbjct: 343 TALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQ 402
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD TF+G+L C+H GLVD+G R+F+ M+ V+ + P +EHYGC++DL RAGLL EA++
Sbjct: 403 PDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQD 462
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LIR +P E N I+ +GALL CR++ + + E + L ++E +S + LL+NIY++
Sbjct: 463 LIRSMPMEANSIV---WGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSA 519
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
++RW++ +R + + G++K+PGCS +E++G++HEFLVGD SH +IY L+ + K
Sbjct: 520 SHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKD 579
Query: 600 LLDSKQN 606
L ++ N
Sbjct: 580 LREAGYN 586
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/513 (41%), Positives = 322/513 (62%), Gaps = 24/513 (4%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+++H +KTG+ + + N I+ G +C ++LFD +P+ V SWN+ G+
Sbjct: 31 KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYS 90
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
+ + V ++ M + N+ PD T T L+LG+E+H + L+
Sbjct: 91 RIACPKLGVSLYLEMLER-NVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNV 149
Query: 225 IMGNALLDMYCKCGCLSEARELFD-----------------EMPNKNVICWTSMVSGYVN 267
NAL++MY CG + AR +FD K+VI WT++V+G+VN
Sbjct: 150 FAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVN 209
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
GQ++ AR F + P RD V WTAMI+GY++ N + EA+ LFREMQ ++KPD+F +V++
Sbjct: 210 TGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSV 269
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
LT CAQLGALE G+WI YI++N++ D V ALI+MY KCG +E AL IF L ++D
Sbjct: 270 LTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDK 329
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
+WT+++ GLA+NG +AL +FSQM+ PD++T++GVLSAC+H G+VDEG++FF +
Sbjct: 330 FTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFAS 389
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
MT + I+P + HYGC++DLLG+AG L EA E+I+ +P + N I+ +GALL ACRI+
Sbjct: 390 MTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIV---WGALLGACRIHK 446
Query: 508 NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+ +M E+ + ++E + + + L NIYA+ N+W+ + +RQ M + G++K PGCS I
Sbjct: 447 DAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLI 506
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
E+NGI+HEF+ GD SH + KEIY L++M L
Sbjct: 507 EMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDL 539
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 221/465 (47%), Gaps = 87/465 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LKQI ++ + G+ NP NK++ FC G++ YA ++F +I P + ++N++
Sbjct: 27 MYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMF 86
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K +++ + + L+ ++ ER V PD +TYPF+FK ++ G ++H +VVK GL+
Sbjct: 87 KGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLD 146
Query: 121 FDTYVCNSIMDMYGVLGKI----------CN----------------------------- 141
+ + N++++MY + G I C
Sbjct: 147 SNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTG 206
Query: 142 ---------VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
+K F +MP++D VSW I G+++ +++A+ +FR M Q + PDE T
Sbjct: 207 FVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREM-QTSKIKPDEFT 265
Query: 193 VVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
+VS L+AC L LELG+ I YI++ +++ +GNAL+DMY KCG + A +F+ +P
Sbjct: 266 MVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLP 325
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
++ WT+MV G ING + EA+ +F +
Sbjct: 326 QRDKFTWTAMVVGLA--------------------------INGCGE-----EALNMFSQ 354
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCG 370
M + PD+ V +L+ C G +++G K+ + I + ++++ K G
Sbjct: 355 MLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAG 414
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNG-KINKALELFSQMI 414
+++A EI + K SI+ G + +I+K E+ + I
Sbjct: 415 HLKEAHEIIKNMPMKP----NSIVWGALLGACRIHKDAEMAERAI 455
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/581 (37%), Positives = 335/581 (57%), Gaps = 74/581 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYNLL 59
+++L Q A I + GL + ++L+ + SH + YA IF I +P +N +
Sbjct: 20 ISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTI 79
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+A+A + +L +F ++ V PD +T+ F K+ G V++G ++HG+V+KTGL
Sbjct: 80 IRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGL 139
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D ++ N+++ +Y G I + + L D M ++DVVSWN +S + + E A +F
Sbjct: 140 GDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDE 199
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
M + +N+E N ++ Y G
Sbjct: 200 MTE---------------------RNVE------------------SWNFMISGYVGVGL 220
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L EAR +F E P KNV+ W +M++GY + G
Sbjct: 221 LEEARRVFGETPVKNVVSWNAMITGYSHAG------------------------------ 250
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
RF E + LF +MQ +KPD LV++L+ CA +GAL QG+W+H YI++N I++D VA
Sbjct: 251 -RFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVA 309
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TAL++MY+KCG IEKALE+F KD ++W SII GL+ +G AL++FS+M+ G K
Sbjct: 310 TALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFK 369
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+++TF+ VLSACS GL+DEGR FN M V+ IQP +EHYGC++DLLGR GLL+EAEE
Sbjct: 370 PNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEE 429
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
L++K+P + ++ + +LL ACR +GNV++ E++A L ++ ++SS L+N+YAS
Sbjct: 430 LVQKMPQKEASVV---WESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYAS 486
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
RW+DV VRQKM+ GVRK PGCS IE++G ++EFL G+
Sbjct: 487 MGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGE 527
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/602 (37%), Positives = 352/602 (58%), Gaps = 73/602 (12%)
Query: 33 PSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP 92
P L YA +F +IQ P LL +N +++ A +L ++ ++ G P+++++P
Sbjct: 9 PHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFP 68
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG------------------ 134
F+ K+ ++G ++H V+K G D YV S++ MY
Sbjct: 69 FLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHR 128
Query: 135 -------------VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
G + +K+FDE+ ++DVVSWN I+G+V+ R+E+A+++F+ M
Sbjct: 129 DVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM 188
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE---FTPIMG--NALLDMYCK 236
+ N+ PDEGT+VS +SAC ++ELG+++H +++ + + F+ + NAL+D+Y K
Sbjct: 189 R-TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSK 247
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG +E A LF+ +D+V W +I GY
Sbjct: 248 CG-------------------------------DVETAFGLFEGLSCKDVVSWNTLIGGY 276
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN--RITV 354
N + EA+ LF+EM P+ L+++L CA LGA++ G+WIH YI++ +T
Sbjct: 277 THTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTN 336
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
+ + T+LI+MYAKCG IE A ++F + + +SW ++I G AM+G+ N A +LFS+M
Sbjct: 337 ETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMR 396
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
+PDDITF+G+LSACSH GL+D GR+ F +MT+ Y + PKLEHYGC+IDLLG +GL
Sbjct: 397 GNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLF 456
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EAEE+I +P E + +I + +LL AC+ +GN+++ E A L KIE ++S + LL+
Sbjct: 457 KEAEEMIHTMPMEPDGVI---WCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLS 513
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA+A RWEDV VR + G++KVPGCSSIE++ ++HEF++GD H +EIY ML+
Sbjct: 514 NIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLE 573
Query: 595 RM 596
M
Sbjct: 574 EM 575
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 51/407 (12%)
Query: 24 NKLMVFCT-----HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
++ +V CT + S G+ A K+F I ++++N +I + + G + ++L LF +
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT----GLEFDTYVCNSIMDMYG 134
+ V PD T V A G ++ G +VH +V G + N+++D+Y
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQG-CNLMPDEGT 192
G + LF+ + KDVVSWN I G+ +++A+ +F+ M R G C P++ T
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC---PNDVT 303
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEFT---PIMGNALLDMYCKCGCLSEARELFDE 249
++S L AC L +++G+ IH YI+++L+ + +L+DMY KCG + A ++F+
Sbjct: 304 LLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNS 363
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
M +++ W +M+ G+ G+ A DLF R
Sbjct: 364 MLYRSLSSWNAMIFGFAMHGRANAAFDLFSR----------------------------- 394
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAK 368
M+ R++PD V LL+ C+ G L+ G+ I + ++ +T +I++
Sbjct: 395 --MRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGH 452
Query: 369 CGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALELFSQMI 414
GL ++A E+ + + E D W S++ +G + A E F+Q +
Sbjct: 453 SGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELA-ESFAQKL 498
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/604 (37%), Positives = 359/604 (59%), Gaps = 9/604 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+T+ Q+ I ++G +++ N L+ F + G + ++F + ++++ LI
Sbjct: 155 LTEGFQVHGAIVKMGFERDMFVENSLIHF--YGECGEIDCMRRVFDKMSERNVVSWTSLI 212
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AK+G +++++ LF ++ E G+ P++ T V A L +++ GE+V + + LE
Sbjct: 213 GGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELE 272
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ + N+++DMY G I +K+FDE DK++V +N +S +V+ + + V M
Sbjct: 273 VNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEM 332
Query: 181 -RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
+ G PD T++S +SAC+ L ++ GK H Y+ LE + NA+++MY KCG
Sbjct: 333 LKHGPR--PDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCG 390
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
A +FD M NK + W S+++G+V G +E A +F P D+V W MI VQ
Sbjct: 391 KQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQ 450
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ F EA+ LFR MQ + DK +V + + C LGAL+ KWIHGYI + I D +
Sbjct: 451 ESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHL 510
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TAL++M+A+CG + A+++F ++ ++D ++WT+ I +AM G A+ELF +M+ G
Sbjct: 511 GTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGI 570
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD + F+ +L+A SHGGLV++G F +M ++Y I P+ HYGC++DLLGRAGLL EA
Sbjct: 571 KPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEAL 630
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
LI + E N++I +G+LL+ACR++ NVD+ A + +++ + + H LL+NIYA
Sbjct: 631 SLINSMQMEPNDVI---WGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYA 687
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
SA RW+DV VR +KE G K+PG SSIEING I EF GD SH EM I ML +
Sbjct: 688 SAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICC 747
Query: 599 TLLD 602
L D
Sbjct: 748 RLRD 751
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 273/546 (50%), Gaps = 75/546 (13%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTH-PSHGNLLYAEKIFG-SIQSPCLLA--- 55
MT+LKQ+ +QI + GL +P +L L+ CT + +L YA+K I+ ++
Sbjct: 46 MTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHY 105
Query: 56 -YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
++ LI+ F+ G K++++F +L G PDNFT+PFV A + +G +VHG +
Sbjct: 106 MFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAI 165
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
VK G E D +V NS++ YG G+I ++++FD+M +++VVSW I G+ K +++AV
Sbjct: 166 VKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAV 225
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDM 233
+F M + + P+ T+V +SAC L++L+LG+++ I + ELE +M NAL+DM
Sbjct: 226 SLFFEMVE-VGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDM 284
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG + +AR++FDE +KN++ + +++S YV G AR
Sbjct: 285 YMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGL---AR------------------ 323
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
E +A+ EM +PD+ +++ ++ C++L + GKW HGY+ N +
Sbjct: 324 ----------EVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLE 373
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI---------- 403
V A+I MY KCG E A +F + K SW S+I G NG +
Sbjct: 374 GWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAM 433
Query: 404 ---------------------NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+A+ELF M S G D +T +GV SAC + G +D
Sbjct: 434 PDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLA- 492
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
++ + + I + L+D+ R G A ++ K+ + V + A + A
Sbjct: 493 KWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRD----VSAWTAAIGA 548
Query: 503 CRIYGN 508
+ GN
Sbjct: 549 MAMEGN 554
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 141/278 (50%), Gaps = 17/278 (6%)
Query: 236 KCGCLSEARELFDEMP----NKNVICWTSMVSGYVNCGQLE------KARDLF--DRSPV 283
KC ++E ++L ++ N + + T+++S G E KA +LF D +
Sbjct: 42 KCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIM 101
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+++++I G+ +A+ +FR++ + PD F +L+ C + AL +G +
Sbjct: 102 GTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQV 161
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
HG I + D V +LI Y +CG I+ +F ++ E++ SWTS+I G A G
Sbjct: 162 HGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCY 221
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
+A+ LF +M+ G +P+ +T +GV+SAC+ + G + + E+ +++
Sbjct: 222 KEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGEL-ELEVNALMVNA 280
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
L+D+ + G +D+A RKI +E + + LY ++S
Sbjct: 281 LVDMYMKCGAIDKA----RKIFDECVDKNLVLYNTIMS 314
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/619 (36%), Positives = 355/619 (57%), Gaps = 8/619 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT--HPSHGNLLYAEKIFGSIQSPCLLAYNL 58
+ +L Q+ A + G L L +C HG L +A ++F I P + YN
Sbjct: 24 IQRLNQLHAHLLVHGSLSAASDL-LLASYCALAKAGHGVLCHARRLFDGIPGPDRVMYNT 82
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+I+A+ R++L L + RG+ P+ FT PFV KA + VHG ++ G
Sbjct: 83 IIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHALAVHGVALRLG 142
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
L +V N+++ Y G + + ++ FDEM D++VVSWN I G+ + + +F
Sbjct: 143 LVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFG 202
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKC 237
MR+ + DE T+VS L AC+ NLE+G+ +H R + I+ +AL+DMY KC
Sbjct: 203 EMRRQ-GFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKC 261
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G L AR F+ MP K+V+ WTSM+ G + AR FD P R+IV W AMI+ YV
Sbjct: 262 GDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYV 321
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q + EA+ L+ +MQ L PD+ LVA+L+ ++G L GK +H YI +N D
Sbjct: 322 QRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVS 381
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ +L++MYAKCG ++ A+ +F E+ ++ SW II GLAM+G+ + F M++
Sbjct: 382 LVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDS 441
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
PD ITF+ +LSACSHGGL++ G+ +F +M VY ++ ++EHY C++DLLGR G L++A
Sbjct: 442 FAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKA 501
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
LI+++P + + ++ +GALL ACRI+GNV +G ++ L ++E L++N+
Sbjct: 502 VCLIKEMPMKPDVVV---WGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLL 558
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
++WED+ +R+ MKE G RK G SSIEIN IHEF V D H EIY+++D+++
Sbjct: 559 YETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERSSEIYAVVDQLS 618
Query: 598 KTLLDSKQNAMEGDNLVAI 616
L+ A+ + L +
Sbjct: 619 YHLISLHLLAVHPEELCVV 637
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/605 (36%), Positives = 351/605 (58%), Gaps = 9/605 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ +KQI AQI + + + L PS L YA +F I +P N
Sbjct: 25 LRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPNPPTRFSN 84
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
L++ F++ + +L L+ LR G D F++P + KAV L + G ++HG K
Sbjct: 85 QLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKF 144
Query: 118 GL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G D ++ ++++ MY G+I + + LFD+M +DVV+WN+ I G+ + ++ + +
Sbjct: 145 GFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKL 204
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYC 235
+ M+ PD + + LSAC NL GK IH++I + +L++MY
Sbjct: 205 YEEMKTS-GTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
CG + ARE++D++P+K+++ T+M+SGY G ++ AR +FDR +D+V W+AMI+G
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Y + + EA+ LF EMQ R+ PD+ ++++++ CA +GAL Q KWIH Y ++N
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ ALI+MYAKCG + KA E+F + K+ SW+S+I AM+G + A+ LF +M
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKE 443
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
+P+ +TFIGVL ACSH GLV+EG++FF++M ++I P+ EHYGC++DL RA L
Sbjct: 444 QNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLR 503
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+A ELI +P N II +G+L+SAC+ +G +++GE A L ++E +L+N
Sbjct: 504 KAMELIETMPFPPNVII---WGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSN 560
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYA RW+DV VR+ MK GV K CS IE+N +H F++ D H + EIY LD
Sbjct: 561 IYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDA 620
Query: 596 MAKTL 600
+ L
Sbjct: 621 VVSQL 625
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 345/598 (57%), Gaps = 43/598 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+++Q+ A + + +P ++L+ + P +L YA IF IQ L+ +N +IK
Sbjct: 28 EVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKC 87
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ + ++LF +L + PDNFT P V K LG V++G+++HG +K G D
Sbjct: 88 YVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD 146
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V S+++MY G+I +K+FD M DKDVV WN I G+ +C + A+ +F
Sbjct: 147 VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEE--- 203
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
MP+ T+ L+D KCG +
Sbjct: 204 ----MPERDAFSWTV--------------------------------LVDGLSKCGKVES 227
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
AR+LFD+MP +N++ W +M++GY+ G + A +LF + P+ D+V W MI GY +F
Sbjct: 228 ARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQF 287
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+AV +F M + +P LV++L+ + L L +G+WIH Y+ +N +D ++ T+L
Sbjct: 288 MDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSL 347
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
IEMYAKCG IE AL +F +++K WT+II GL ++G N AL LF +M G KP+
Sbjct: 348 IEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNA 407
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
I FIGVL+AC+H GLVD+GR++F+ M Y+I+P LEHYGCL+D+L RAG L+EA+ I
Sbjct: 408 IIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIE 467
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P N++I + +LL R +G +D+GE A + ++ + + LL+N+YA++
Sbjct: 468 NMPISPNKVI---WMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGM 524
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
WE V++VR+ M + G RK PGCSS+E G +HEF+VGD SH + KEIY+ + M + L
Sbjct: 525 WEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKL 582
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/634 (36%), Positives = 359/634 (56%), Gaps = 74/634 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+TQ+ QI AQ GL + KL+ ++ YA + SP ++N LI
Sbjct: 12 LTQIHQIHAQTLIHGLPLQTHLIPKLIDL------HSIDYARFVLDQTPSPTDFSWNSLI 65
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ GS + SL L+ K+ P NFT+PFV KA LG V +GE++H +V++ G
Sbjct: 66 RAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFG 125
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +VCNS++DMY ++ + + +D+M +D VSWN ISG+V+ + E A D+F M
Sbjct: 126 SDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEM 185
Query: 181 RQGCNLM---------------------------------PDEGTVVSTLSACTALKNLE 207
N++ P+ T+V LSAC+ L N E
Sbjct: 186 PMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYE 245
Query: 208 LGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
+G+ + +I+ ++ I+ AL+DMY K
Sbjct: 246 VGRFLSVFIDVNKIPLNTILVTALIDMYSK------------------------------ 275
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
CG +EKA +FD +++ W A+I G VQ +EA+ L+R M+ +KP++ LV
Sbjct: 276 -CGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVN 334
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
+L+ CA LGALE G+ +H Y+ N + ++ ++ATAL++MYAKCG I+ A IF + EKD
Sbjct: 335 VLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKD 394
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
A W ++I GLA +G +L +FSQM+ G +P+D+TFIGVLSAC+H GLV+EGR F+
Sbjct: 395 VALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFS 454
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+M + + + PKLEHY C++DLLGRAG L EA EL++ + + II +GALLSACRI+
Sbjct: 455 SMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSII---WGALLSACRIH 511
Query: 507 GNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
N+++ +K++ + + + F LL+NIYAS+ RW+DV VR+++KE ++K GCS
Sbjct: 512 RNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSW 571
Query: 567 IEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+E++G++H F+V D +H + EIY + + L
Sbjct: 572 VEVDGVVHRFVVEDTTHLKSGEIYGAYEILVNHL 605
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/603 (37%), Positives = 347/603 (57%), Gaps = 70/603 (11%)
Query: 29 FCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPD 87
FC P L YA +F +IQ P LL +N + + A +L L+ + G+ P+
Sbjct: 3 FCILSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPN 62
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY-------------- 133
++T+PF+ K+ L K+G ++HG+V+K G E D YV S++ MY
Sbjct: 63 SYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFD 122
Query: 134 -----------------GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G I + + +FDE+P KDVVSWN ISG+V+ +++A+++
Sbjct: 123 RSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALEL 182
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
F+ M + N+ PDE T+V+ +SA ++ELG+++H +I + + NAL+D Y
Sbjct: 183 FKEMMK-TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYS 241
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG ++E A LF +D++ W +I G
Sbjct: 242 KCG-------------------------------EMETACGLFLGLSYKDVISWNILIGG 270
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE--NRIT 353
Y N + EA+ LF+EM P+ ++++L CA LGA++ G+WIH YI++ +T
Sbjct: 271 YTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVT 330
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ + T+LI+MY+KCG IE A ++F + K +W ++I G AM+G+ N A ++FS+M
Sbjct: 331 NASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM 390
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
KPDDITF+G+LSACSH G++D GR F +MT Y+I PKLEHYGC+IDLLG +GL
Sbjct: 391 RKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGL 450
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
EAEE+I + E + +I + +LL AC+++GNV++GEK A L KIE + + LL
Sbjct: 451 FKEAEEMISTMTMEPDGVI---WCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLL 507
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA+A RW +V +R + + G++KVPGCSSIEI+ ++HEF++GD H +EIY ML
Sbjct: 508 SNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 567
Query: 594 DRM 596
+ M
Sbjct: 568 EEM 570
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/592 (37%), Positives = 345/592 (58%), Gaps = 69/592 (11%)
Query: 33 PSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP 92
P L YA IF +IQ P LL +N + + A +L L+ + G+ P+++++P
Sbjct: 10 PHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFP 69
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK-------------- 138
F+ K+ + +G+++HG+V+K G + D YV S++ MY G+
Sbjct: 70 FLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHR 129
Query: 139 -----------------ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
I N +KLFDE+ KDVVSWN ISG+V+ F++A+++++ M
Sbjct: 130 HVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMM 189
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCL 240
+ N+ PDE T+V+ +SAC ++ELG+++H +I + I + N L+D+Y KCG
Sbjct: 190 K-TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCG-- 246
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
++E A LF +D++ W +I G+ N
Sbjct: 247 -----------------------------EVETACGLFQGLAKKDVISWNTLIGGHTHMN 277
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE--NRITVDAVV 358
+ EA+ LF+EM P+ ++++L CA LGA++ G+WIH YIN+ +T + +
Sbjct: 278 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSL 337
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T+LI+MYAKCG IE A ++F + + +SW ++I G AM+GK N A +LFS+M G
Sbjct: 338 LTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGI 397
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PDDITF+G+LSACSH G++D GR F +M++ Y+I PKLEHYGC+IDLLG GL EA+
Sbjct: 398 DPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAK 457
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+IR +P E + +I + +LL AC+++ NV++GE A L KIE ++ + LL+NIYA
Sbjct: 458 EMIRTMPMEPDGVI---WCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYA 514
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
+A RW+ V +R + + G++K PGCSSIEI+ ++HEF++GD H +EIY
Sbjct: 515 TAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIY 566
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 184/378 (48%), Gaps = 39/378 (10%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ S G + A K+F I ++++N +I + + +F+++L L+ + + V PD T
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V A G ++ G ++H ++ G + + N ++D+Y G++ LF +
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGK 210
KDV+SWN I GH +++A+ +F+ M R G + P++ T++S L AC L +++G+
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGES--PNDVTMLSVLPACAHLGAIDIGR 318
Query: 211 EIHRYINQELEFTPIMGN---ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
IH YIN+ L+ + +L+DMY KCG + A+++FD M +++ W +M+ G+
Sbjct: 319 WIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 378
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G+ A DLF + M+ + PD V L
Sbjct: 379 HGKANAAFDLFSK-------------------------------MRKNGIDPDDITFVGL 407
Query: 328 LTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYEL-REK 385
L+ C+ G L+ G+ I ++++ +IT +I++ CGL ++A E+ + E
Sbjct: 408 LSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEP 467
Query: 386 DAASWTSIICGLAMNGKI 403
D W S++ M+ +
Sbjct: 468 DGVIWCSLLKACKMHNNV 485
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/602 (36%), Positives = 353/602 (58%), Gaps = 8/602 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC-LLAYNLL 59
+ +KQ+ A I + + + L S NL YA +F SI SP + +N
Sbjct: 25 LNHIKQLHAHILRTVINHKLNSF--LFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPF 82
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
++ ++ R ++L + ++R G D F++ + KAV + + +G ++HG K
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V MDMY G+I + +FDEM +DVV+WN I + + ++A +F
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG 238
M+ N+MPDE + + +SAC N+ + I+ + I ++ + AL+ MY G
Sbjct: 203 MKDS-NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAG 261
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
C+ ARE F +M +N+ T+MVSGY CG+L+ A+ +FD++ +D+V WT MI+ YV+
Sbjct: 262 CMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE 321
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ EA+ +F EM +KPD + ++++ CA LG L++ KW+H I+ N + + +
Sbjct: 322 SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI 381
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI MYAKCG ++ ++F ++ ++ SW+S+I L+M+G+ + AL LF++M
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+++TF+GVL CSH GLV+EG++ F +MT+ Y I PKLEHYGC++DL GRA LL EA
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+I +P +N +I +G+L+SACRI+G +++G+ A + ++E L++NIYA
Sbjct: 502 EVIESMPVASNVVI---WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYA 558
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
RWEDV N+R+ M+E V K G S I+ NG HEFL+GD H + EIY+ LD +
Sbjct: 559 REQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Query: 599 TL 600
L
Sbjct: 619 KL 620
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/609 (37%), Positives = 360/609 (59%), Gaps = 22/609 (3%)
Query: 1 MTQLKQIQAQIFQIGLQ--QNPETLNKLMVFCTHPSHGNLLYA-EKIFGSIQSPC--LLA 55
M + Q+ F L NP L ++ HGN + E + + C +
Sbjct: 5 MQRFPQLSHTRFSFRLHPLTNPNKLPRI--------HGNTIATVEDPSAASRLDCANVFV 56
Query: 56 YNLLIKAFAKKGSFRKS--LLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+N +I+ + G + LL + + G+ P+ T+ ++ KA+ EVK+GE+VH
Sbjct: 57 WNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHAS 116
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF-ED 172
VV+TG +V +++ Y G + +++FDEM +V W + I +V C+ F E
Sbjct: 117 VVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYV-CVTFPEK 175
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALL 231
A+++FR MR+ L PD + + +SAC L +L + K +H +I + +E + + L+
Sbjct: 176 ALELFRTMRE-VGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLI 234
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
Y +CG L A F E P KN++ W +M+ V LE + LF P RD+V W +
Sbjct: 235 STYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNS 294
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI G+ + ++ EA+ F EM+ + P+ L++ L+ CA GAL+ G WIH Y+++N
Sbjct: 295 MIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKND 354
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ D + ++LI+MY+KCG I+KA++IF E +D +WTSI+CGLAM+G+ KAL FS
Sbjct: 355 MNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFS 414
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+M +PDD+T +GVLSAC+H GL+D+G +F +M +V+ + PK+EHYGC++DLLGR
Sbjct: 415 KMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRM 474
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G L EA +LI +P E NEII +GA LSACR++ NV++GE A L ++ +D
Sbjct: 475 GCLKEAYDLIMGMPMEANEII---WGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARV 531
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
+L+N+YA +W+ +R+++K+ G++K PGCSSIE+NG +H FLVGD SH EI S
Sbjct: 532 MLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINS 591
Query: 592 MLDRMAKTL 600
M++++ K +
Sbjct: 592 MVEKIEKLM 600
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/593 (37%), Positives = 353/593 (59%), Gaps = 14/593 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
Q+F Q+N T N ++ T G L A+ +F S+ +N ++ FA+
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKL--GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
++L F+ + + G + +++ V A L ++ KG +VH + K+ D Y+ +++
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY G + + +++FDEM D++VVSWN I+ + +A+DVF+ M + + PD
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPD 252
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSEARELF 247
E T+ S +SAC +L +++G+E+H + N +L I+ NA +DMY KC + EAR +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D MP +NVI TSM+SGY + AR +F + R++V W A+I GY Q +EA++
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH------GYINENRITVDAVVATA 361
LF ++ + P + +L CA L L G H G+ ++ D V +
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MY KCG +E+ +F ++ E+D SW ++I G A NG N+ALELF +M+ G KPD
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
IT IGVLSAC H G V+EGR +F++MT + + P +HY C++DLLGRAG L+EA+ +I
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMI 552
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
++P + + +I +G+LL+AC+++ N+ +G+ +A L ++E +S + LL+N+YA
Sbjct: 553 EEMPMQPDSVI---WGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+WEDV NVR+ M++ GV K PGCS I+I G H F+V D SH K+I+S+LD
Sbjct: 610 KWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 140/261 (53%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N L+D Y KCG L + R++FD+MP +N+ W S+V+G G L++A LF P RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W +M++G+ Q +R +EA+ F M +++ ++L+ C+ L + +G +H I
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
++ D + +AL++MY+KCG + A +F E+ +++ SW S+I NG +AL
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
++F M+ +PD++T V+SAC+ + G+ + + +++ + +D+
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 468 LGRAGLLDEAEELIRKIPNEN 488
+ + EA + +P N
Sbjct: 299 YAKCSRIKEARFIFDSMPIRN 319
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 225/502 (44%), Gaps = 113/502 (22%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
VH V+K+G + ++ N ++D Y G + + +++FD+MP +++ +WN ++G K
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 170 FEDAVDVFRRM--RQGCN----------------------LMPDEGTVV------STLSA 199
++A +FR M R C +M EG V+ S LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 200 CTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
C+ L ++ G ++H I + + + +G+AL+DMY KCG +++A+ +FDEM ++NV+ W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
S+++ + G +A D +F+ M R++
Sbjct: 222 NSLITCFEQNGPAVEALD-------------------------------VFQMMLESRVE 250
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALE 377
PD+ L ++++ CA L A++ G+ +HG + +N ++ D +++ A ++MYAKC I++A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 378 I-------------------------------FYELREKDAASWTSIICGLAMNGKINKA 406
I F ++ E++ SW ++I G NG+ +A
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG-RRFFNTMTEVYQIQPKLEHY---- 461
L LF + P +F +L AC+ + G + + + ++ Q E
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPLYGALLSACRIYGNVDMGEKLAA 517
LID+ + G ++E + RK+ + N +I+ A YGN E L
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF------AQNGYGN----EALEL 480
Query: 518 LLEKIESKDSSFHTLLANIYAS 539
E +ES + H + + ++
Sbjct: 481 FREMLESGEKPDHITMIGVLSA 502
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 47/208 (22%)
Query: 320 DKFILVALLTGC--AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
D LL C ++L A+ +++H + ++ + + + LI+ Y+KCG +E +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELF-----------SQMISGGAKPD----- 421
+F ++ +++ +W S++ GL G +++A LF + M+SG A+ D
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 422 ---------------DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI---QPKLEHY-- 461
+ +F VLSACS GL D N +V+ + P L
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACS--GLND-----MNKGVQVHSLIAKSPFLSDVYI 189
Query: 462 -GCLIDLLGRAGLLDEAEELIRKIPNEN 488
L+D+ + G +++A+ + ++ + N
Sbjct: 190 GSALVDMYSKCGNVNDAQRVFDEMGDRN 217
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/577 (36%), Positives = 360/577 (62%), Gaps = 15/577 (2%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETL-NKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +K+ A + + +NP+++ N + + SH N A F I P LL +N L
Sbjct: 70 IKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALSRSHLN--KANFAFIQIGQPTLLIFNYL 127
Query: 60 IKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
I+ ++ + ++++++S L +G+ DN T+ ++FKA + +V G+ H V+K G
Sbjct: 128 IRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLG 187
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
++ NS++ MYG G++ +K+FD+M D+D+VSWN I G+ +C RF++ +D+F
Sbjct: 188 FGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFN 247
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKC 237
MR+ N+ D T+V + AC+ L + + +YI ++ ++ +GN+L+DMY +
Sbjct: 248 LMREA-NVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRR 306
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G + AR +FD M KN++ W +M++GY G L A+ LF+ P+R+++ WT MI+G
Sbjct: 307 GLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCA 366
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q N+ +A+ LF+EM +KPD+ + ++L+ C+ LG L+ G+ +H Y+ + I D
Sbjct: 367 QANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVY 426
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V ALI+MY KCG+++KALE+F+++++KD+ SWTS+I GLA+NG ++ ELFSQM+ G
Sbjct: 427 VGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDG 486
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P +FIG+L AC+H GLVD+G +F +M VY ++P+++HYGC++DLL R+G LD A
Sbjct: 487 LQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRA 546
Query: 478 EELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
E I+++P +VP L+ LLSAC+++ N+ + E + L +++ +S + LL+
Sbjct: 547 YEFIKQMP------VVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLS 600
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
N YA ++RW+D + +R M V+K SSIE+ G
Sbjct: 601 NTYAGSDRWDDASRMRDLMVVGDVQKPSSWSSIEVIG 637
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 332/563 (58%), Gaps = 42/563 (7%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F + ++++N +I +++ G ++L LFS+++ G+ P++ T V
Sbjct: 169 GSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVM 228
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
L +++G+++H Y +++G+E D V N +++MY G + KLF+ MP +DV
Sbjct: 229 PVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVA 288
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G+ + +A+ F RM Q + P+ T+VS L AC L LE G++IH Y
Sbjct: 289 SWNAIIGGYSLNSQHHEALAFFNRM-QVRGIKPNSITMVSVLPACAHLFALEQGQQIHGY 347
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I E ++GNAL++MY KC G + A
Sbjct: 348 AIRSGFESNDVVGNALVNMYAKC-------------------------------GNVNSA 376
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
LF+R P +++V W A+I+GY Q EA+ALF EMQ +KPD F +V++L CA
Sbjct: 377 YKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHF 436
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
ALEQGK IHGY + + VV T L+++YAKCG + A ++F + E+D SWT++I
Sbjct: 437 LALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMI 496
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
++G AL LFS+M G K D I F +L+ACSH GLVD+G ++F M Y +
Sbjct: 497 LAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGL 556
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKI---PNENNEIIVPLYGALLSACRIYGNVDM 511
PKLEHY CL+DLLGRAG LDEA +I+ + P+ N ++GALL ACRI+ N+++
Sbjct: 557 APKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDAN------VWGALLGACRIHCNIEL 610
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
GE+ A L +++ ++ ++ LL+NIYA A RWEDV +R+ MKE GV+K PGCS + ++
Sbjct: 611 GEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHR 670
Query: 572 IIHEFLVGDPSHSEMKEIYSMLD 594
+ FLVGD +H + ++IY+ML+
Sbjct: 671 DVQTFLVGDRTHPQSEQIYAMLE 693
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 194/374 (51%), Gaps = 50/374 (13%)
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+ V W +I G+VK + A+ ++ +M R G N PD+ +S + AC + +L+ G++
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGIN--PDKLVFLSVIKACGSQSDLQAGRK 141
Query: 212 IHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H I + E I+G AL MY K CG
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTK-------------------------------CGS 170
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
LE AR +FDR P RD+V W A+I GY Q + EA+ALF EMQ+ +KP+ LV+++
Sbjct: 171 LENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPV 230
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA L ALEQGK IH Y + I D +V L+ MYAKCG + A ++F + +D ASW
Sbjct: 231 CAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASW 290
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+II G ++N + ++AL F++M G KP+ IT + VL AC+H +++G++
Sbjct: 291 NAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG---- 346
Query: 451 VYQIQPKLEHY----GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
Y I+ E L+++ + G ++ A +L ++P +N V + A++S +
Sbjct: 347 -YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKN----VVAWNAIISGYSQH 401
Query: 507 GNVDMGEKLAALLE 520
G+ E LA +E
Sbjct: 402 GHPH--EALALFIE 413
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 199/397 (50%), Gaps = 37/397 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQI + G++ + +N L+ + GN+ A K+F + + ++N +I
Sbjct: 237 LEQGKQIHCYAIRSGIESDVLVVNGLVNM--YAKCGNVNTAHKLFERMPIRDVASWNAII 294
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
++ ++L F++++ RG+ P++ T V A L +++G+++HGY +++G E
Sbjct: 295 GGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFE 354
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ V N++++MY G + + KLF+ MP K+VV+WN ISG+ + +A+ +F M
Sbjct: 355 SNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEM 414
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
Q + PD +VS L AC LE GK+IH Y I E ++G L+D+Y KCG
Sbjct: 415 -QAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGN 473
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
++ A++LF+ MP ++V+ WT+M+ Y G E
Sbjct: 474 VNTAQKLFERMPEQDVVSWTTMILAYGIHGHGE--------------------------- 506
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
+A+ALF +MQ K D A+LT C+ G ++QG ++ ++ +
Sbjct: 507 ----DALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEH 562
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSII 394
L+++ + G +++A I + E DA W +++
Sbjct: 563 YACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALL 599
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 116/213 (54%), Gaps = 10/213 (4%)
Query: 278 FDRSPVRD-IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
F ++ +R+ V+W I GYV+ +++A+ L+ +MQ + PDK + ++++ C
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
L+ G+ +H I D +V TAL MY KCG +E A ++F + ++D SW +II G
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+ NG+ +AL LFS+M G KP+ T + V+ C+H +++G++ Y I+
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQI-----HCYAIRS 250
Query: 457 KLEH----YGCLIDLLGRAGLLDEAEELIRKIP 485
+E L+++ + G ++ A +L ++P
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP 283
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 162/322 (50%), Gaps = 18/322 (5%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q +QI + G + N N L+ + GN+ A K+F + ++A+N +I
Sbjct: 338 LEQGQQIHGYAIRSGFESNDVVGNALVNM--YAKCGNVNSAYKLFERMPKKNVVAWNAII 395
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+++ G ++L LF +++ +G+ PD+F V A +++G+++HGY +++G E
Sbjct: 396 SGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFE 455
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ V ++D+Y G + +KLF+ MP++DVVSW I + EDA+ +F +M
Sbjct: 456 SNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKM 515
Query: 181 RQ-GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKC 237
++ G L D + L+AC+ ++ G + + + + P + + L+D+ +
Sbjct: 516 QETGTKL--DHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRA 573
Query: 238 GCLSEARELFDEM---PNKNVICWTSMVSG-YVNCG---QLEKARDLFDRSPVRDIVLWT 290
G L EA + M P+ NV W +++ ++C + A+ LF+ P + +
Sbjct: 574 GHLDEANGIIKNMSLEPDANV--WGALLGACRIHCNIELGEQAAKHLFELDP-DNAGYYV 630
Query: 291 AMINGYVQFNRFDEAVALFREM 312
+ N Y + R+++ VA R+M
Sbjct: 631 LLSNIYAEAQRWED-VAKLRKM 651
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/499 (40%), Positives = 310/499 (62%), Gaps = 9/499 (1%)
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV---LGKICNVK 143
+F P + + + + H +++K+GL T+ + ++ I
Sbjct: 3 SSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAH 62
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
+F +P+ + WN I + E A+ +F +M +++PD+ T L +C +
Sbjct: 63 SIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHA-SVLPDKYTFTFALKSCGSF 121
Query: 204 KNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
+E G++IH ++ L + N L+ +Y CGC+ +AR L D M ++V+ W +++
Sbjct: 122 SGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALL 181
Query: 263 SGYVNCGQLEKA-RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
S Y G +E A R +F +PV+++V W AMI GY RF E + LF +MQ +KPD
Sbjct: 182 SAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDN 241
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
LV++L+ CA +GAL QG+W+H YI++N I++D VATAL++MY+KCG IEKALE+F
Sbjct: 242 CTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNS 301
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
KD ++W SII GL+ +G AL++FS+M+ G KP+++TF+ VLSACS GL+DEG
Sbjct: 302 CLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEG 361
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
R FN M V+ IQP +EHYGC++DLLGR GLL+EAEEL++K+P + ++ + +LL
Sbjct: 362 REMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVV---WESLLG 418
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
ACR +GNV++ E++A L ++ ++SS L+N+YAS RW+DV VRQKM+ GVRK
Sbjct: 419 ACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKD 478
Query: 562 PGCSSIEINGIIHEFLVGD 580
PGCS IE++G ++EFL G+
Sbjct: 479 PGCSMIEVDGTVYEFLAGE 497
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 210/446 (47%), Gaps = 76/446 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYNLL 59
+++L Q A I + GL + ++L+ + SH + YA IF I +P +N +
Sbjct: 20 ISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTI 79
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+A+A + +L +F ++ V PD +T+ F K+ G V++G ++HG+V+KTGL
Sbjct: 80 IRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGL 139
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEM------------------------------ 149
D ++ N+++ +Y G I + + L D M
Sbjct: 140 GDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFG 199
Query: 150 --PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
P K+VVSWN I+G+ RF + + +F M Q + PD T+VS LSAC + L
Sbjct: 200 ETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDM-QHAGVKPDNCTLVSVLSACAHVGALS 258
Query: 208 LGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
G+ +H YI++ + + AL+DMY KCG + +A E+F+ K++ W S++SG
Sbjct: 259 QGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLS 318
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G + A+ +F EM + KP++ V
Sbjct: 319 THGSGQ-------------------------------HALQIFSEMLVEGFKPNEVTFVC 347
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVAT-----ALIEMYAKCGLIEKALEIFYE 381
+L+ C++ G L++G+ + + + V + T ++++ + GL+E+A E+ +
Sbjct: 348 VLSACSRAGLLDEGREMFNLM----VHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQK 403
Query: 382 LREKDAA-SWTSIICGLAMNGKINKA 406
+ +K+A+ W S++ +G + A
Sbjct: 404 MPQKEASVVWESLLGACRNHGNVELA 429
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 9/289 (3%)
Query: 39 LYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
L + ++FG ++++N +I ++ G F + L+LF ++ GV PDN T V A
Sbjct: 192 LASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSAC 251
Query: 99 GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
+G + +GE VH Y+ K G+ D +V +++DMY G I ++F+ KD+ +WN
Sbjct: 252 AHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWN 311
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
ISG + A+ +F M P+E T V LSAC+ L+ G+E+ +
Sbjct: 312 SIISGLSTHGSGQHALQIFSEMLVE-GFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVH 370
Query: 219 ELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNKNV-ICWTSMVSGYVNCGQLE--- 272
P + + ++D+ + G L EA EL +MP K + W S++ N G +E
Sbjct: 371 VHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAE 430
Query: 273 -KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
A+ L + SP ++ + + N Y R+ + + + ++M+ ++ D
Sbjct: 431 RVAQKLLELSP-QESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKD 478
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 342/556 (61%), Gaps = 8/556 (1%)
Query: 16 LQQNPETL-NKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
L+ +P T+ N + + PS +L A +F I P L +N++I+ ++ +++
Sbjct: 6 LRTDPSTIYNLIKSYALSPS--TILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIR 63
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
+++ + +G+ +N TY F+FKA + +V G +H V+K G E YV N++++MYG
Sbjct: 64 MYNLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYG 123
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
G + +K+FDEMP++D+VSWN + G+ +C RF + + VF MR + D T+V
Sbjct: 124 SCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVA-GVKGDAVTMV 182
Query: 195 STLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
+ ACT+L + + YI + +E +GN L+DMY + G + AR +FD+M +
Sbjct: 183 KVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWR 242
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
N++ W +M+ GY G L AR+LFD RD++ WT MI Y Q +F EA+ LF+EM
Sbjct: 243 NLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMM 302
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
++KPD+ + ++L+ CA G+L+ G+ H YI + + D V ALI+MY KCG++E
Sbjct: 303 ESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVE 362
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
KALE+F E+R+KD+ SWTSII GLA+NG + AL+ FS+M+ +P F+G+L AC+
Sbjct: 363 KALEVFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACA 422
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H GLVD+G +F +M +VY ++P+++HYGC++DLL R+G L A E I+++P + +I
Sbjct: 423 HAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVI- 481
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+ LLSA +++GN+ + E L +++ +S + L +N YA +NRWED +R+ M
Sbjct: 482 --WRILLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELM 539
Query: 554 KEMGVRKVPGCSSIEI 569
++ V+K G S IE+
Sbjct: 540 EKSNVQKPSGSSCIEM 555
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/609 (37%), Positives = 358/609 (58%), Gaps = 22/609 (3%)
Query: 1 MTQLKQIQAQIFQIGLQ--QNPETLNKLMVFCTHPSHGNLLYA-EKIFGSIQSPC--LLA 55
M + Q+ F L NP L ++ HGN + E + + C +
Sbjct: 5 MQRFPQLSHTRFSFRLHPLTNPNKLPRI--------HGNTIATVEDPSAASRLDCANVFV 56
Query: 56 YNLLIKAFAKKGSFRKS--LLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+N +I+ + G + LL + + G+ P+ T+ ++ KA+ EVK+GE+VH
Sbjct: 57 WNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHAS 116
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF-ED 172
VV+TG +V +++ Y G + +++FDEM +V W + I +V C+ F E
Sbjct: 117 VVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYV-CVTFPEK 175
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALL 231
A+++FR MR+ L PD V + +SAC L +L + K +H +I + +E + + L+
Sbjct: 176 ALELFRTMRE-VGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLI 234
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
Y +CG L A F E P KN++ W +M+ V LE + LF P RD+V W +
Sbjct: 235 STYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNS 294
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI G+ + ++ EA+ F EM+ + P+ L++ L+ CA GAL+ G WIH Y+++N
Sbjct: 295 MIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKND 354
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ D + ++LI+MY+KCG I+KA++IF E +D +WTSI+CGLAM+G+ KAL FS
Sbjct: 355 MNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFS 414
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+M +PDD+T +GVLSAC+H GL+D+G +F +M +V+ + PK+EHYG ++DLLGR
Sbjct: 415 KMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRM 474
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G L EA +LI +P E NEII +GA LSACR++ NV++GE A L + +D
Sbjct: 475 GCLKEAYDLIMGMPMEANEII---WGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARV 531
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
+L+N+YA +W+ +R+++K+ G++K PGCSSIE+NG +H FLVGD SH EI S
Sbjct: 532 MLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINS 591
Query: 592 MLDRMAKTL 600
M++++ K +
Sbjct: 592 MVEKIEKLM 600
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/592 (37%), Positives = 342/592 (57%), Gaps = 69/592 (11%)
Query: 33 PSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP 92
P L YA +F +IQ P L +N +I+ A SL L+ + G+ P+++T+P
Sbjct: 9 PHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFP 68
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY------------------- 133
F+ K+ +G+++HG V+K G + D YV S++ MY
Sbjct: 69 FLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHR 128
Query: 134 ------------GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
G I + +KLFDE+P KDVVSWN ISG+ + +++A+++F M
Sbjct: 129 DVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+ N+ PDE T V+ LSAC ++ELG+++H +++ + + NAL+D+Y KCG
Sbjct: 189 K-MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG-- 245
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
++E A LF +D++ W +I GY N
Sbjct: 246 -----------------------------EVETACGLFQGLSYKDVISWNTLIGGYTHMN 276
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE--NRITVDAVV 358
+ EA+ LF+EM P+ ++++L CA LGA++ G+WIH YI++ +T + +
Sbjct: 277 LYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 336
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T+LI+MYAKCG IE A ++F + K +SW ++I G AM+G+ + + +LFS+M G
Sbjct: 337 RTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 396
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PDDITF+G+LSACSH G++D GR F +MT+ Y++ PKLEHYGC+IDLLG +GL EAE
Sbjct: 397 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 456
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+I + E + +I + +LL AC+++GNV++ E A L KIE ++ S + LL+NIYA
Sbjct: 457 EMINTMEMEPDGVI---WCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYA 513
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
SA RWEDV +R + ++KVPGCSSIE++ ++ EF+VGD H + +EIY
Sbjct: 514 SAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIY 565
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 197/387 (50%), Gaps = 40/387 (10%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ S G++ A+K+F I ++++N +I +A+ G ++++L LF ++ + V PD TY
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V A G ++ G +VH +V G + + + N+++D+Y G++ LF +
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGK 210
KDV+SWN I G+ +++A+ +F+ M R G P++ T++S L AC L +++G+
Sbjct: 260 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG--ETPNDVTMLSVLPACAHLGAIDIGR 317
Query: 211 EIHRYINQELEF---TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
IH YI++ L+ + +L+DMY KCG + A ++F+ M +K++ W +M+ G+
Sbjct: 318 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 377
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G+ + + DLF R M+ I ++PD V L
Sbjct: 378 HGRADASFDLFSR-------------------------------MRKIGIEPDDITFVGL 406
Query: 328 LTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELR-EK 385
L+ C+ G L+ G+ I + ++ ++T +I++ GL ++A E+ + E
Sbjct: 407 LSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEP 466
Query: 386 DAASWTSIICGLAMNGKINKALELFSQ 412
D W S++ M+G + A E F+Q
Sbjct: 467 DGVIWCSLLKACKMHGNVELA-ESFAQ 492
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 341/598 (57%), Gaps = 43/598 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+ Q+ A + +P ++L+ P NL YA +F IQ P L+++NLLIK
Sbjct: 30 EANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKC 89
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ + ++ LF KL V PD+FT P V K LG +++G+++HG V+K G D
Sbjct: 90 YIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVD 148
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V +S++ MY G+I +K+FD M DKDVVSWN I G+ +C E A+++F M
Sbjct: 149 KFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEM-- 206
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
P++ + T+ L+D K G L
Sbjct: 207 -----PEKDSFSWTI--------------------------------LIDGLSKSGKLEA 229
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
AR++FD MP +N + W +M++GY+ G A++LFD+ P R +V W +MI GY + +F
Sbjct: 230 ARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQF 289
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+A+ LF M + P+ ++ ++ + + +L G+W+H YI ++ D V+ T L
Sbjct: 290 TKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLL 349
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
IEMY+KCG ++ AL +F + +K WTS+I GL M+G + + LELF +M G KP
Sbjct: 350 IEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHA 409
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITFIGVL+ACSH G ++ R+F MT Y I+P +EHYGCLID+L RAG L+EA++ I
Sbjct: 410 ITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIE 469
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P + N++I + +LLS R +GN+ MGE A L + + + +L+N+YA+A
Sbjct: 470 RMPIKANKVI---WTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGL 526
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
WE V VR+ MK+ G++K PGCSSIE G IHEF+VGD SH + +EIY L M K L
Sbjct: 527 WEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKL 584
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/607 (36%), Positives = 347/607 (57%), Gaps = 10/607 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMV-FCTHPSHGN---LLYAEKIFGSIQSPCLLAY 56
+ L Q+ A + G + +L+ +C L +A ++F + P AY
Sbjct: 16 IRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFAY 75
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N LI+A++ G +++L L + RG+ P+ FT PFV KA + HG +K
Sbjct: 76 NSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEHALATHGVAIK 135
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM-PDKDVVSWNVSISGHVKCMRFEDAVD 175
G +V N+++ G + + ++LF EM P ++VVSWN I G + +A
Sbjct: 136 LGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACA 195
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMY 234
+FR MR+ ++ D T VS L C+ NLE+G+ +H + I+GNAL+DMY
Sbjct: 196 LFREMRRQ-GVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMY 254
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KCG L A FD MP KNV+ WTSM+ G ++ ARD F++ P R+I+ W AMI+
Sbjct: 255 GKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMIS 314
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
YVQ RF E + L+ M+ + L PD+ L +L+ Q G L G+ IH YI ++
Sbjct: 315 CYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDP 374
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
V +LI+MYA+CG ++ ++ +F E+ K+ SW II LAM+G+ +A+ F M+
Sbjct: 375 GVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMV 434
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
S PD+ITF+G+LSACSHGGL+++G+ +F M +Y ++P++EHY C++DLLGR G L
Sbjct: 435 SDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHL 494
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+A +LI+ +P + + ++ +GAL+ ACRI+G+V++G+ L ++E + L++
Sbjct: 495 AKAVDLIKDMPMKPDVVV---WGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLIS 551
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
N+ +WED+ +R+ M++ G +K G SSIEIN IHEF V D H +IY+ +D
Sbjct: 552 NLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESSSQIYAAVD 611
Query: 595 RMAKTLL 601
++A L+
Sbjct: 612 QLAYHLV 618
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/602 (38%), Positives = 358/602 (59%), Gaps = 15/602 (2%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNL--LI 60
+L Q+ A + GL + ++L+ FC S L + SP AY L ++
Sbjct: 50 RLLQLHALLTVTGLAAHRFPASRLLAFCAL-STPPRLAHAAAILARASPGPNAYMLGTMM 108
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG------EKVHGYV 114
+ F + ++L LF ++ + D T+ F KA E + G E +H
Sbjct: 109 RGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIHCAA 168
Query: 115 VKTGLEFDTY-VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
+K G ++ V N+++ Y + + K+FDEMP++DVVSW + G+ + ++A
Sbjct: 169 LKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEA 228
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLD 232
+F RM + P+ T+V+ +SA + L G +H+Y+ + + + + NAL+D
Sbjct: 229 WRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVD 288
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
M+ KCGC+ ARE+FD M K+V WTSMV+ Y CG LE A LF P R++V W+ M
Sbjct: 289 MFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCM 348
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH-GYINENR 351
I Y Q N+ +EAV LFREM + P LV++L+ CAQLG L+ G+WI+ YI N+
Sbjct: 349 IAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNK 408
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
I + + ALI+M+AKCG + +A ++F E+ E++ SW ++I A++G+ +A+ LF
Sbjct: 409 IGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFE 468
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
Q+ PD ITF+G+L++CSH GLV EGRR+F M Y+I+P++EHY C+IDLLG+
Sbjct: 469 QLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKV 528
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
GLL+EA E+ R +P E +E +GALL+ACR++GNV++G +A L +++ DS +
Sbjct: 529 GLLEEAFEVARGMPMEADEAG---WGALLNACRMHGNVEIGACVADKLVELDPSDSGIYV 585
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
L++ IYAS N+W+ V +R M++ GV+K PGCSSIE+ G H+FLV D SH+ +EIYS
Sbjct: 586 LMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVSHACSEEIYS 645
Query: 592 ML 593
L
Sbjct: 646 AL 647
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/604 (37%), Positives = 352/604 (58%), Gaps = 48/604 (7%)
Query: 2 TQLKQIQAQIFQIG-LQQNPETLNKLMVFCTHPSHGNLLYAEKIF-----GSIQSPCLLA 55
+ L Q+ A + + G L + ++ + L+ S L YA +F + +PC
Sbjct: 30 SYLPQLHAALIKSGELTGSAKSFHSLLEAAA-ASPTLLPYAVSLFRLGPRPPLSTPC--- 85
Query: 56 YNLLIKAFAKKGSFRKSLLLFSK-LRERGVSP-DNFTYPFVFKAVGWLGEVKKGEKVHGY 113
YN+L++AF G +L LF + L P D T K+ + + G V Y
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
VK GL D +V +S++ MY G + + +FD + VV WN ++ ++K + +
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLD 232
V++F+ M + + DE T+VS ++AC + + +LGK + ++++E L P + AL+D
Sbjct: 206 VEMFKGMLE-VGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMD 264
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY KC G++ KAR LFD RD+V W+AM
Sbjct: 265 MYAKC-------------------------------GEIGKARRLFDGMQSRDVVAWSAM 293
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I+GY Q ++ EA+ LF EMQ+ R++P+ +V++L+ CA LGALE GKW+H Y+ R+
Sbjct: 294 ISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRL 353
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
++ ++ TAL++ YAKCG I+ A+E F + K++ +WT++I G+A NG+ +ALELFS
Sbjct: 354 SLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSS 413
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M G +P D+TFIGVL ACSH LV+EGRR F++M Y I+P++EHYGC++DLLGRAG
Sbjct: 414 MREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAG 473
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
L+DEA + IR +P E N +I + ALLS+C ++ NV +GE+ + + S + L
Sbjct: 474 LVDEAYQFIRTMPIEPNAVI---WRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVL 530
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+NIYASA +W+D VR++MK+ G+ K PGCS IE++G++ EF D H E++EIY
Sbjct: 531 LSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQK 590
Query: 593 LDRM 596
++ M
Sbjct: 591 VEEM 594
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 346/567 (61%), Gaps = 45/567 (7%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+ L+Q+ A+I + GL Q+ +++ + C S N Y +F + SP + +N IK
Sbjct: 39 STLEQVHARIIRKGLHQDHFIISQFLTLCN--SLSNFSYTTSVFNGVSSPSTVLWNTYIK 96
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ S ++ LF +++ PD FTYP + KA + VK+G HG V+ G+
Sbjct: 97 GYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGG 156
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D +V S++D+YG G+I +K+FDEM +++VVSW I+G+ F D V+ R
Sbjct: 157 DVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYAS---FSDLVEA----R 209
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+ + MP++ V NA++ Y KCG L
Sbjct: 210 KLFDEMPEKNAV--------------------------------SWNAIISGYVKCGDLR 237
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
AR++FDEMP++NV+ +T+M+ GY G + AR +F+ +P RD+V W+A+I+GYVQ +
Sbjct: 238 SARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQ 297
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD-AVVAT 360
+EAV +F EM +KPD+FI+V+L++ C+Q+G+LE KW+ Y+ ++ I V A V
Sbjct: 298 PNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA 357
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+M AKCG +++A ++F E+ ++D S+ S++ GL+++G +A+ LFS+M++ G P
Sbjct: 358 ALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTP 417
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DD+ F +L+ACS GLVDEG +F +M Y I P +HY C++DLLGRAG L EA EL
Sbjct: 418 DDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYEL 477
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
++ +P E + +GALL AC+++ ++++GE +A L ++E +++ + LL+NIYA+A
Sbjct: 478 LKSMPVEPH---AGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAA 534
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+W DV+ +R KM+E G+RK+PGCS I
Sbjct: 535 EQWLDVSLLRNKMRERGIRKIPGCSWI 561
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/594 (38%), Positives = 347/594 (58%), Gaps = 9/594 (1%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ A + GL + ++L+ FC + + +A I +P +++AF +
Sbjct: 55 QLHALLTVSGLAAHRFPASRLLAFCALSTPPRVDHAAAILARASAPNAYMLATMMRAFLR 114
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK---GEKVHGYVVKTG-LEF 121
++ LF ++ + D T F KA E GE VH +K G +
Sbjct: 115 ARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGEGVHCVALKWGHVAQ 174
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
V N+++ Y + + + LFDEMPD+DVVSW + G+ + ++A VF RM
Sbjct: 175 SVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMV 234
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCL 240
L P+E T+V+ +SA + L G+ ++RY+ + + + + NAL+DM+ K GC
Sbjct: 235 VAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCA 294
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ ARE+FD M K+V WT+MV+ Y CG LE A LFD P R+ V W+ MI Y Q N
Sbjct: 295 ASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQAN 354
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH-GYINENRITVDAVVA 359
+ +EAV LF+ M ++P LV++L+ CAQLG L+ G+WI+ Y+ + + +
Sbjct: 355 QPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLG 414
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
A I++YAKCG + A ++F E+ E++ SW S+I A++G+ + L LF Q+
Sbjct: 415 NAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIV 474
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD+ITF+G+LSACSH GLV EGRR+F M +Y I+PK EHY C+IDLLG+ GLL+EA E
Sbjct: 475 PDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFE 534
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+ + +P E +E +GALL+ACR+YGNV++GE A L ++ DS + L++ IYAS
Sbjct: 535 VAKGMPMETDE---AGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYAS 591
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
N+W+ V +R M+E GV+K PGCSSIE++G HEFLV D SH ++IY+ L
Sbjct: 592 KNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVSHVHSEDIYAAL 645
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 334/571 (58%), Gaps = 39/571 (6%)
Query: 34 SHGNLLYAEKIF--GSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK-LRERGVSPDNFT 90
S +L YA ++F G +YN+LI++F + G +L LF + L + VSPD T
Sbjct: 114 SSAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHT 173
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
K+ + ++ G V Y K G D +V NS++ MY G + LF +
Sbjct: 174 VANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQ 233
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
K V++WN I+G+VK +++ V++F+ M + DE T++S +AC L + LG+
Sbjct: 234 VKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLE-VRAPFDEVTLLSVATACGRLGDANLGQ 292
Query: 211 EIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
I Y ++ + + + AL+DMY K CG
Sbjct: 293 WIAEYAEEKGMLRSRNLATALVDMYAK-------------------------------CG 321
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
+L+KAR LFDR RD+V W+AMI+GY Q +R EA+A+F EMQ + P+ +V++L+
Sbjct: 322 ELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLS 381
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
CA LGALE GKW+H YI + + ++ TAL++ YAKCG I+ A++ F + ++ +
Sbjct: 382 ACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWT 441
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
WT++I G+A NG+ +ALELFS M+ +P D+TFIGVL ACSHG LV+EGRR F +MT
Sbjct: 442 WTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMT 501
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+ Y I P++EHYGC++DLLGRAGL+DEA + IR +P E N ++ + ALLSAC ++ NV
Sbjct: 502 QDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVV---WRALLSACTVHKNV 558
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
++GE+ + ++ S + LL+N YAS +W++ VR++MKE GV K+PGCS IE+
Sbjct: 559 EIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIEL 618
Query: 570 NGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
G I EF D H ++ EIY + M + +
Sbjct: 619 EGTIFEFFAEDSEHPQLTEIYEKVHEMIENI 649
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 200/413 (48%), Gaps = 37/413 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ +QA F+ G + LN L+ + S G+++ A +F ++Q ++A+N +I +
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHM--YASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYV 248
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G +++ + +F + E D T V A G LG+ G+ + Y + G+
Sbjct: 249 KNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRN 308
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ +++DMY G++ ++LFD M +DVV+W+ ISG+ + R +A+ +F M QG
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEM-QGT 367
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
+ P++ T+VS LSAC L LE GK +H YI ++L T I+G AL+D Y KCGC+ +A
Sbjct: 368 EVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDA 427
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+ F+ MP +N WT+++ G + G R
Sbjct: 428 VKAFESMPVRNTWTWTALIKGMASNG-------------------------------RSR 456
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-L 362
EA+ LF M ++P + +L C+ +E+G+ + ++ + +
Sbjct: 457 EALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCM 516
Query: 363 IEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMI 414
+++ + GLI++A + + E +A W +++ ++ + E Q++
Sbjct: 517 VDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIV 569
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/590 (35%), Positives = 340/590 (57%), Gaps = 75/590 (12%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L Q+ A + + G Q+ L+ +P N +A K+F SI +P + +N++IK
Sbjct: 49 LTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGC 108
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ K++ + ++ P+ FTYP +FKA V++G ++HG+VVK G+ D
Sbjct: 109 LENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDV 167
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
++ ++ + MY G++ + +K+F + DVV WN I G++KC E A +F +M
Sbjct: 168 HIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQM--- 223
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+KN+ N +++ K G L +A
Sbjct: 224 ------------------PVKNIG------------------SWNVMINGLAKGGNLGDA 247
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R+LFDEM ++ I W+SMV GY++ G R+
Sbjct: 248 RKLFDEMSERDEISWSSMVDGYISAG-------------------------------RYK 276
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ +F++MQ +P +FIL ++L C+ +GA++QG+W+H Y+ N I +DAV+ TAL+
Sbjct: 277 EALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALL 336
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MYAKCG ++ E+F E++E++ +W ++I GLA++G+ ALELFS++ G KP+ I
Sbjct: 337 DMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGI 396
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T +GVL+AC+H G VD+G R F TM E Y + P+LEHYGC++DLLGR+GL EAE+LI
Sbjct: 397 TLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINS 456
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + N + +GALL ACRI+GN D+ E++ +L ++E ++S + LL+NIYA R+
Sbjct: 457 MPMKPNAAV---WGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRF 513
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+DV+ +R+ MK G++ VPG S +++NG +HEF +GD SH +MKEIY L
Sbjct: 514 DDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKL 563
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/570 (37%), Positives = 339/570 (59%), Gaps = 28/570 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LK++ + + Q+ L++L+ FC + GNL YA+ +F I P L +N +I
Sbjct: 18 MAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSLYIWNSMI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K ++ S ++L ++ ++R++G +PD+FT+PFV KA + G+ VH +VKTG E
Sbjct: 78 KGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIVKTGFE 137
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y +++ MY G + K+FD++P +VV+W I+G + +AV V++ M
Sbjct: 138 VDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDM 197
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ ++ P+E T+V+ L AC ++L G+ +H Q + P N+
Sbjct: 198 -ELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQ-MGLDPFQSNS----------- 244
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
N NVI T++V Y CG L+ ARDLF++ P R++V W +MI Y Q+
Sbjct: 245 -----------NFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYG 293
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+ +EA+ LF +M+I PDK + ++ CA LGAL G+ +H Y+++ +T D + T
Sbjct: 294 QANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGT 353
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK- 419
AL++MYAK G E+A ++F EL++KD +WTS+I GLAM+G +AL F +M A
Sbjct: 354 ALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALI 413
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD+IT+IGVLSACSH G V++G+ F +M V+ I+P +HYGC++DLL RAG L EAE
Sbjct: 414 PDEITYIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAER 473
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
L+ K+P E N I + ALL+ C+IY N+D+ +++ + ++E S + LL+NIYA
Sbjct: 474 LVEKMPVEPNTAI---WSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAG 530
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
A RWE+V R+ MKE ++K G SS+E+
Sbjct: 531 ACRWEEVKMARELMKERKIQKSLGHSSVEM 560
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 341/593 (57%), Gaps = 75/593 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L Q+ + + G Q+ L+ +P N +A K+F SI +P + +N++I
Sbjct: 46 LQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI 105
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K + K++ + ++ P+ FTYP +FKA V++G ++HG+VVK G+
Sbjct: 106 KGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIG 164
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D ++ ++ + MY G++ + +K+F + DVV WN I G++KC E A +F +M
Sbjct: 165 SDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQM 223
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+KN+ N +++ K G L
Sbjct: 224 ---------------------PVKNIG------------------SWNVMINGLAKGGNL 244
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR+LFDEM ++ I W+SMV GY++ G
Sbjct: 245 GDARKLFDEMSERDEISWSSMVDGYISAG------------------------------- 273
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
R+ EA+ +F++MQ +P +FIL ++L C+ +GA++QG+W+H Y+ N I +DAV+ T
Sbjct: 274 RYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT 333
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL++MYAKCG ++ E+F E++E++ +W ++I GLA++G+ ALELFS++ G KP
Sbjct: 334 ALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKP 393
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
+ IT +GVL+AC+H G VD+G R F TM E Y + P+LEHYGC++DLLGR+GL EAE+L
Sbjct: 394 NGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDL 453
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P + N + +GALL ACRI+GN D+ E++ +L ++E ++S + LL+NIYA
Sbjct: 454 INSMPMKPNAAV---WGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKV 510
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
R++DV+ +R+ MK+ G++ VPG S +++NG +HEF +GD SH +MKEIY L
Sbjct: 511 GRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKL 563
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/606 (36%), Positives = 344/606 (56%), Gaps = 49/606 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQI AQ+ + + L K+ + YA F +I P ++N++I
Sbjct: 45 IKQLKQIHAQLLTNSIHKPNSFLYKIADL------KDFAYASVFFSNILDPTEYSFNVMI 98
Query: 61 KAFAKKGSFRKSLL---LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+ + ++ KS L +S+++ G+ P+N TYPF+F A L V+ G H V++
Sbjct: 99 RGLST--AWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
GL+ D +V +S++ MY GK+ + +K+FDE+ KD+VSWN ISG+ K +AV +F
Sbjct: 157 GLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLF 216
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCK 236
R M + P+E ++VS L AC L +L+LG + ++ ++ MG+AL+ MY K
Sbjct: 217 REMMEA-GFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGK 275
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C G L AR +FD +D V W AMI GY
Sbjct: 276 C-------------------------------GDLVSARRIFDSMKKKDKVTWNAMITGY 304
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q +EA+ LF++M++ PD+ L+ +L+ CA +GAL+ GK + Y +E D
Sbjct: 305 AQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDV 364
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS- 415
V TAL++MYAKCG ++ A +FY + +K+ SW ++I LA +G+ +AL LF M++
Sbjct: 365 YVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNE 424
Query: 416 -GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
G P+DITF+GVLSAC H GLVDEGRR F+ M+ + + PK+EHY C++DL RAG L
Sbjct: 425 GGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHL 484
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+EA + + +P + +E+I+ GALL AC+ N+D+ E++ LL ++E +S + + +
Sbjct: 485 EEAWDFVMTMPEKPDEVIL---GALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISS 541
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+YA+ RW+D +R MK+ GV K PGCS I+IN +HEF GD H E EI+ +LD
Sbjct: 542 KLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILD 601
Query: 595 RMAKTL 600
+ L
Sbjct: 602 LLIDDL 607
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/605 (38%), Positives = 338/605 (55%), Gaps = 54/605 (8%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+K++ AQI + L + KL+ + NL A +F IQ P + YN LI+
Sbjct: 37 NHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNL--AVNVFNQIQDPNVHLYNTLIR 94
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV---GWLGEVKKGEKVHGYVVKTG 118
A + K+ F +++ G+ DNFTYPF+ KA GWL V + +H +V K G
Sbjct: 95 AHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTV---QMIHCHVEKYG 151
Query: 119 LEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
D +V NS++D Y G+LG + KLF EM +KD+VSWN I G VK A
Sbjct: 152 FFGDLFVPNSLIDSYSKCGLLG-VNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARK 210
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+F M E + N +LD Y
Sbjct: 211 LFDEMA---------------------------------------ERDAVSWNTILDGYV 231
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G +S+A LF++MP +NV+ W++MVSGY G +E AR LFD+ P +++V WT +I+G
Sbjct: 232 KAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISG 291
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+ + EA L+ +M+ LKPD L+++L CA+ G L GK +H I + RI
Sbjct: 292 FAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCS 351
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V+ AL++MYAKCG ++KAL IF E+ +D SW ++ GLAM+G KA++LFS+M
Sbjct: 352 VNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQ 411
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G KPD +T I +L AC+H G VD+G +FN+M + I P +EHYGC+IDLLGR G L+
Sbjct: 412 EGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLE 471
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA L++ +P E N++I +G LL ACR++ V + EK+ L +E D +++L+N
Sbjct: 472 EAFRLVQSMPMEPNDVI---WGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSN 528
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
I+A+A W V N+R +MK GV+K G SSIE++ +HEF V D SH E +IY +L +
Sbjct: 529 IFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILVK 588
Query: 596 MAKTL 600
+ + L
Sbjct: 589 LGQDL 593
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/600 (36%), Positives = 353/600 (58%), Gaps = 45/600 (7%)
Query: 4 LKQIQAQIFQIG-LQQNPETLNKLMVFCTHPSHGNLLYAEKIF-----GSIQSPCLLAYN 57
L Q+ A + + G L +P+ + L+ S L YA +F + +PC YN
Sbjct: 32 LPQLHAALIKSGELTGSPKCFHSLLEAAA-ASPTLLPYAVSLFRLGPRPPLSTPC---YN 87
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRE-RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
+L++A G +L LF ++ + V PD T K+ + + G + Y VK
Sbjct: 88 VLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVK 147
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
GL D +V +S++ MY + + LFD + + VV WN I+ ++K + + V++
Sbjct: 148 RGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEM 207
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
F+ M + + DE T+VS ++AC + + +LGK + Y++++
Sbjct: 208 FKGMLE-VGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEK----------------- 249
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
+ N+N++ T+++ Y CG+L KAR LFD RD+V W+AMI+GY
Sbjct: 250 -----------GLVRNRNLM--TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGY 296
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q ++ EA+ALF EMQ+ ++P+ +V++L+ CA LGALE GKW+H YI R+++
Sbjct: 297 TQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTI 356
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
++ TAL++ YAKCG I+ A+E F + K++ +WT++I G+A NG+ +ALELFS M
Sbjct: 357 ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKA 416
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
+P D+TFIGVL ACSH LV+EGRR F++MT+ Y I+P+ EHYGC++DLLGRAGL+DE
Sbjct: 417 SIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDE 476
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A + IR +P E N +I + ALLS+C ++ NV++GE+ + + S + LL+NI
Sbjct: 477 AYQFIRTMPIEPNAVI---WRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNI 533
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YAS +W++ +R++MK+ G+ K PGCS IE++G++ EF D H ++KEIY ++ M
Sbjct: 534 YASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEM 593
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/606 (36%), Positives = 343/606 (56%), Gaps = 49/606 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQI AQ+ + + L K+ + YA F +I P ++N++I
Sbjct: 45 IKQLKQIHAQLLTNSIHKPNSFLYKIADL------KDFAYASVFFSNILDPTEYSFNVMI 98
Query: 61 KAFAKKGSFRKSLL---LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+ + ++ KS L +S+++ G+ P+N TYPF+F A L V+ G H V++
Sbjct: 99 RGLST--AWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
GL+ D +V +S++ MY GK+ + +K+FDE+ KD+VSWN ISG+ K +AV +F
Sbjct: 157 GLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLF 216
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCK 236
R M + P+E ++VS L AC L +L+LG + ++ ++ MG+AL+ MY K
Sbjct: 217 REMMEA-GFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGK 275
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C G L AR +FD +D V W AMI GY
Sbjct: 276 C-------------------------------GDLVSARRIFDSMKKKDKVTWNAMITGY 304
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q +EA+ LF++M++ PD+ L+ +L+ CA +GAL+ GK + Y +E D
Sbjct: 305 AQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDV 364
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS- 415
V TAL++MYAKCG ++ A +FY + K+ SW ++I LA +G+ +AL LF M++
Sbjct: 365 YVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNE 424
Query: 416 -GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
G P+DITF+GVLSAC H GLVDEGRR F+ M+ + + PK+EHY C++DL RAG L
Sbjct: 425 GGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHL 484
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+EA + + +P + +E+I+ GALL AC+ N+D+ E++ LL ++E +S + + +
Sbjct: 485 EEAWDFVMTMPEKPDEVIL---GALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISS 541
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+YA+ RW+D +R MK+ GV K PGCS I+IN +HEF GD H E EI+ +LD
Sbjct: 542 KLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILD 601
Query: 595 RMAKTL 600
+ L
Sbjct: 602 LLIDDL 607
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/603 (35%), Positives = 348/603 (57%), Gaps = 65/603 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQI + ++GL +P N+++ FC GN+ YA ++F +I P + +N +I
Sbjct: 20 MYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMI 79
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K ++K + ++ + + PD FT+PF K ++ G+++ + VK G +
Sbjct: 80 KGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGFD 139
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ +V + + M+ + G + K+FD +VV+WN+ +SG+ + +F+ +
Sbjct: 140 SNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQFKIS------- 192
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
++ LSAC+ LK+LE GK I +YIN G + M+ CG
Sbjct: 193 -----------KMLLVLSACSKLKDLEWGKHIFKYIN---------GGIVEHMFAACG-- 230
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
++++A+ +FD RD+V WTAMI+GY++ N
Sbjct: 231 -----------------------------EMDEAQGVFDNMKTRDVVSWTAMIDGYLRMN 261
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
F A+ALFREMQ+ +KPD+F +V++L CA LGALE G+W+ I++N D+ V
Sbjct: 262 HFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGN 321
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL++MY KCG + KA ++F E+ +KD +WT++I GLA+NG +AL +FS MI P
Sbjct: 322 ALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTP 381
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D+IT+IGVL AC +VD+G+ FF MT + I+P + HYGC++DLLG G L+EA E+
Sbjct: 382 DEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEV 437
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P + N I+ +G+ L ACR++ NV + + A + ++E ++ + + LL NIYA++
Sbjct: 438 IVNMPVKPNSIV---WGSPLGACRVHKNVQLADMAAKQILELEPENGAVYVLLCNIYAAS 494
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+WE++ VR+ M E G++K PGCS +E+NG ++EF+ GD SH + KEIY+ L+ M + L
Sbjct: 495 KKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQGL 554
Query: 601 LDS 603
+ +
Sbjct: 555 IKA 557
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/607 (38%), Positives = 333/607 (54%), Gaps = 54/607 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMV---FCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ + QI AQ+ + L Q+ KL+ C H L A +F + P + YN
Sbjct: 34 LDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRH-----LASAVNVFNHVPHPNVHLYN 88
Query: 58 LLIKAFAKKGSFRK-SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
+I+A A S R F ++++ G+ PDNFTYPF+ KA + +H +V K
Sbjct: 89 SIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEK 148
Query: 117 TGLEFDTYVCNSIMDMYGVLGK--ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
G D +V NS++D Y G + LF M ++DVV+WN I G V+C + A
Sbjct: 149 IGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGAC 208
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMY 234
+F + MPD V N +LD Y
Sbjct: 209 KLF-------DEMPDRDMVS--------------------------------WNTMLDGY 229
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
K G + A ELF+ MP +N++ W++MV GY G ++ AR LFDR PV+++VLWT +I
Sbjct: 230 AKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIA 289
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY + EA L+ +M+ ++PD L+++L CA+ G L GK IH + R
Sbjct: 290 GYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRC 349
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYE-LREKDAASWTSIICGLAMNGKINKALELFSQM 413
A V A I+MYAKCG ++ A ++F + +KD SW S+I G AM+G KALELFS M
Sbjct: 350 GAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWM 409
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
+ G +PD TF+G+L AC+H GLV+EGR++F +M +VY I P++EHYGC++DLLGR G
Sbjct: 410 VQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGH 469
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA L+R +P E N II+ G LL+ACR++ +VD+ + L K+E D ++LL
Sbjct: 470 LKEAFMLLRSMPMEPNAIIL---GTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLL 526
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA A W +V NVR +MK G K G SSIE+ +HEF V D SH + +IY M+
Sbjct: 527 SNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMI 586
Query: 594 DRMAKTL 600
DR+ + L
Sbjct: 587 DRLVQDL 593
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/517 (41%), Positives = 307/517 (59%), Gaps = 52/517 (10%)
Query: 89 FTYPFVFKA-----VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
TYPFV KA V W G + VH +VVK+G E D+Y+ NS++ +Y + K
Sbjct: 1 MTYPFVIKACNESSVTWFGLL-----VHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAK 55
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
+LF D+DVVSWN I G+VK VF RM C +
Sbjct: 56 QLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM------------------VCRDV 97
Query: 204 KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
I N +++ Y G + EA+ LFDEMP +N++ W SM+S
Sbjct: 98 ---------------------ISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLS 136
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G+V CG +E+A LF P RD+V W +M+ Y Q + +EA+ALF +M+ + +KP +
Sbjct: 137 GFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEAT 196
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+V+LL+ CA LGAL++G +H YIN+NRI V+++V TAL++MYAKCG I A ++F +
Sbjct: 197 VVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME 256
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
KD +W +II G+A++G + +A +LF +M +P+DITF+ +LSACSH G+VDEG++
Sbjct: 257 SKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQK 316
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+ M+ Y I+PK+EHY C+IDLL RAGLL+EA ELI +P E N + GALL C
Sbjct: 317 LLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSAL---GALLGGC 373
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
RI+GN ++GE + L ++ S + LL+NIYA+A +W+D VR MK G+ KVPG
Sbjct: 374 RIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPG 433
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
S IE+ G++H F+ GD SH E +IY L+ + L
Sbjct: 434 VSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRL 470
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GN+ A +F + ++++N ++ +A+ G ++L LF ++R GV P T +
Sbjct: 142 GNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 201
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + KG +H Y+ +E ++ V +++DMY GKI ++F+ M KDV+
Sbjct: 202 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 261
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN I+G ++A +F+ M++ ++ P++ T V+ LSAC+ ++ G+++
Sbjct: 262 AWNTIIAGMAIHGHVKEAQQLFKEMKEA-SVEPNDITFVAMLSACSHAGMVDEGQKLLDC 320
Query: 216 INQELEFTPIMG--NALLDMYCKCGCLSEARELFDEMP 251
++ P + + ++D+ + G L EA EL MP
Sbjct: 321 MSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMP 358
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 340/599 (56%), Gaps = 45/599 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ QIQAQI G Q N KL+ C + + YA ++F I P + +N + +
Sbjct: 116 QVHQIQAQIIANGFQYNEYITPKLVTICA--TLKRMTYARQLFDQIPDPNIALWNSMFRG 173
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+A+ S+R+ + LF +++ + P+ FT+P V K+ G + + +GE+VH +++K G +
Sbjct: 174 YAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGN 233
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V +++DMY G + + K+F EM +++VV+W I+G++ A +F
Sbjct: 234 PFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF----- 288
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
+L P+ V + N ++ Y + G + E
Sbjct: 289 --DLAPERDVV--------------------------------LWNIMVSGYIEGGDMVE 314
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
AR+LF EMPN++V+ W +++ GY G +E LF+ P R+I W A+I GY F
Sbjct: 315 ARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLF 374
Query: 303 DEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
E + F+ M + P+ LV +L+ CA+LGAL+ GKW+H Y + + + V A
Sbjct: 375 FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNA 434
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MYAKCG+IE A+ +F + KD SW ++I GLAM+ + AL LF QM + G KPD
Sbjct: 435 LMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPD 494
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
ITFIG+L AC+H GLV++G +F +M + Y I P++EHYGC++D+L RAG L++A +
Sbjct: 495 GITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFV 554
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
RK+P E + +I + LL ACRIY NV++ E L ++E K+ + + +L+NIY A
Sbjct: 555 RKMPVEADGVI---WAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAG 611
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
RWEDV ++ M++ G +K+PGCS IE+N + EF D H +++EIY +L + K L
Sbjct: 612 RWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVL 670
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 190/386 (49%), Gaps = 43/386 (11%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K+ ++ ++ G +++ Y+ ++ + L ++ ++LFD++PD ++ WN G+
Sbjct: 115 KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGY 174
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFT 223
+ + + V +F +M+ G ++ P+ T L +C + L G+++H + I
Sbjct: 175 AQSESYREVVFLFFQMK-GMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGN 233
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
P +G L+DMY G + +A ++F EM +NV+ WTSM++GY+ L AR LFD +P
Sbjct: 234 PFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPE 293
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
RD+VLW M++GY++ EA LF EM P++
Sbjct: 294 RDVVLWNIMVSGYIEGGDMVEARKLFXEM------PNR---------------------- 325
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
D + +++ YA G +E +F E+ E++ SW ++I G A NG
Sbjct: 326 -----------DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLF 374
Query: 404 NKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+ L F +M+S P+D T + VLSAC+ G +D G ++ + E ++ +
Sbjct: 375 FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLG-KWVHVYAESSGLKGNVYVGN 433
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNEN 488
L+D+ + G+++ A + R + ++
Sbjct: 434 ALMDMYAKCGIIENAISVFRGMDTKD 459
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 340/599 (56%), Gaps = 45/599 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ QIQAQI G Q N KL+ C + + YA ++F I P + +N + +
Sbjct: 53 QVHQIQAQIIANGFQYNEYITPKLVTICA--TLKRMTYARQLFDQIPDPNIALWNSMFRG 110
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+A+ S+R+ + LF +++ + P+ FT+P V K+ G + + +GE+VH +++K G +
Sbjct: 111 YAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGN 170
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V +++DMY G + + K+F EM +++VV+W I+G++ A +F
Sbjct: 171 PFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF----- 225
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
+L P+ V + N ++ Y + G + E
Sbjct: 226 --DLAPERDVV--------------------------------LWNIMVSGYIEGGDMVE 251
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
AR+LF EMPN++V+ W +++ GY G +E LF+ P R+I W A+I GY F
Sbjct: 252 ARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLF 311
Query: 303 DEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
E + F+ M + P+ LV +L+ CA+LGAL+ GKW+H Y + + + V A
Sbjct: 312 FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNA 371
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MYAKCG+IE A+ +F + KD SW ++I GLAM+ + AL LF QM + G KPD
Sbjct: 372 LMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPD 431
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
ITFIG+L AC+H GLV++G +F +M + Y I P++EHYGC++D+L RAG L++A +
Sbjct: 432 GITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFV 491
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
RK+P E + +I + LL ACRIY NV++ E L ++E K+ + + +L+NIY A
Sbjct: 492 RKMPVEADGVI---WAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAG 548
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
RWEDV ++ M++ G +K+PGCS IE+N + EF D H +++EIY +L + K L
Sbjct: 549 RWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVL 607
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 190/386 (49%), Gaps = 43/386 (11%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K+ ++ ++ G +++ Y+ ++ + L ++ ++LFD++PD ++ WN G+
Sbjct: 52 KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGY 111
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFT 223
+ + + V +F +M+ G ++ P+ T L +C + L G+++H + I
Sbjct: 112 AQSESYREVVFLFFQMK-GMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGN 170
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
P +G L+DMY G + +A ++F EM +NV+ WTSM++GY+ L AR LFD +P
Sbjct: 171 PFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPE 230
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
RD+VLW M++GY++ EA LF EM P++
Sbjct: 231 RDVVLWNIMVSGYIEGGDMVEARKLFHEM------PNR---------------------- 262
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
D + +++ YA G +E +F E+ E++ SW ++I G A NG
Sbjct: 263 -----------DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLF 311
Query: 404 NKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+ L F +M+S P+D T + VLSAC+ G +D G ++ + E ++ +
Sbjct: 312 FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLG-KWVHVYAESSGLKGNVYVGN 370
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNEN 488
L+D+ + G+++ A + R + ++
Sbjct: 371 ALMDMYAKCGIIENAISVFRGMDTKD 396
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/556 (36%), Positives = 333/556 (59%), Gaps = 6/556 (1%)
Query: 40 YAEKIFGSIQS-PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
YA +F SI P + +N L++ ++ G R ++L + ++R G D ++P + KAV
Sbjct: 65 YALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAV 124
Query: 99 GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
+ + +G ++HG+ K D +V +MDMY G+I + +FDEM +DVV+WN
Sbjct: 125 SKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWN 184
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-IN 217
I + + ++A +F M+ N+MPDE + + +SAC N+ + I+ + I
Sbjct: 185 TMIERYCRFGLLDEAFKLFEEMKDS-NVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIE 243
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
++ + AL+ MY GC+ A E F +M +N+ T+MVSGY G+L+ AR +
Sbjct: 244 NDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVI 303
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FD++ ++D+V WT MI+ Y + + EA+ +F EM +KPD ++++++ C LG L
Sbjct: 304 FDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTL 363
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
++ KW+H Y + N + + ALI MYAKCG ++ A ++F ++ ++ SW+S+I
Sbjct: 364 DKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAF 423
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
AM+G+ + +L LF+QM +P+++TF+GVL CSH GLV+EG++ F +MT+ Y I PK
Sbjct: 424 AMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPK 483
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
+EHYGC++DL GRA LL EA E+I +P N +I +G+L+SACR++G +++GE A
Sbjct: 484 IEHYGCMVDLFGRANLLREALEVIESMPMAPNVVI---WGSLMSACRVHGELELGELAAK 540
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
+ K+E L++NIYA RW+ V +R M++ V K G S I++NG HEFL
Sbjct: 541 RILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFL 600
Query: 578 VGDPSHSEMKEIYSML 593
+GD H + EIY+ L
Sbjct: 601 IGDKRHKQSNEIYTKL 616
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/590 (37%), Positives = 332/590 (56%), Gaps = 85/590 (14%)
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD 147
NF P V KA G + + G+++HG+V+K GL+ D +V N++M MYG + + +FD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLM---PDEGTVVSTLSACTALK 204
+M ++DVVSW+ I + F+ A+++ R M N M P E +VS ++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREM----NFMQVRPSEVAMVSMVNLFADTA 209
Query: 205 NLELGKEIHRYI----NQELEFTPIMGNALLDMYCKC----------------------- 237
N+ +GK +H Y+ N E P ALLDMY KC
Sbjct: 210 NMRMGKAMHAYVIRNSNNEHMGVPTT-TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTA 268
Query: 238 ---GC-----LSEARELFDEMPNKNVI--------------------------------- 256
GC L E +LF M +N+
Sbjct: 269 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG 328
Query: 257 ------CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
T++V Y C + AR LFD + RD+++WTAM++ Y Q N D+A LF
Sbjct: 329 FSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFD 388
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+M+ ++P K +V+LL+ CA GAL+ GKW+H YI++ R+ VD ++ TAL++MYAKCG
Sbjct: 389 QMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCG 448
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
I A +F E +D W +II G AM+G +AL++F++M G KP+DITFIG+L
Sbjct: 449 DINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLH 508
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
ACSH GLV EG++ F M + + P++EHYGC++DLLGRAGLLDEA E+I+ +P + N
Sbjct: 509 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 568
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
I+ +GAL++ACR++ N +GE A L +IE ++ ++ L++NIYA+ANRW D VR
Sbjct: 569 IV---WGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVR 625
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+ MK +G++K PG S IE+NG +HEFL+GD SH +++ I ML M + L
Sbjct: 626 KTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKL 675
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 184/379 (48%), Gaps = 45/379 (11%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F + ++++ +I + + LF +++E + P+ T +
Sbjct: 246 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
G+ G ++ G+++H Y+++ G + +++DMYG I N + LFD ++DV+
Sbjct: 306 VECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVM 365
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
W +S + + + A ++F +MR + P + T+VS LS C L+LGK +H Y
Sbjct: 366 IWTAMLSAYAQANCIDQAFNLFDQMRTS-GVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 424
Query: 216 INQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I++E +E I+ AL+DMY KCG ++ A LF E ++++ W ++++G+
Sbjct: 425 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFA-------- 476
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
++GY +EA+ +F EM+ +KP+ + LL C+
Sbjct: 477 ------------------MHGY-----GEEALDIFAEMERQGVKPNDITFIGLLHACSHA 513
Query: 335 GALEQGKWIHGYINENRITVDAVVAT-----ALIEMYAKCGLIEKALEIFYELREK-DAA 388
G + +GK + E + +V ++++ + GL+++A E+ + K +
Sbjct: 514 GLVTEGK----KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTI 569
Query: 389 SWTSII--CGLAMNGKINK 405
W +++ C L N ++ +
Sbjct: 570 VWGALVAACRLHKNPQLGE 588
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 13/289 (4%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F S Q+ ++ + ++ A+A+ ++ LF ++R GV P T +
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G + G+ VH Y+ K +E D + +++DMY G I +LF E +D+ WN
Sbjct: 412 AGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 471
Query: 161 ISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
I+G E+A+D+F M RQG + P++ T + L AC+ + GK++ +
Sbjct: 472 ITGFAMHGYGEEALDIFAEMERQG--VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT 529
Query: 220 LEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG-----YVNCGQL 271
P + + ++D+ + G L EA E+ MP K N I W ++V+ G+L
Sbjct: 530 FGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGEL 589
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
A L + P + M N Y NR+ +A + + M+ + +K +
Sbjct: 590 -AATQLLEIEP-ENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE 636
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/601 (37%), Positives = 349/601 (58%), Gaps = 49/601 (8%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LKQI AQ+ + + L+K++ +L YA +F + P + A+N++++
Sbjct: 49 LKQIHAQMLINSIPKPNFLLSKIIDL------KDLAYASLVFNQLTKPNIYAFNVMLRGL 102
Query: 64 A---KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A KK F + L+ KL+ G+ +NFTYPF+F A G + + G+ H V K GL+
Sbjct: 103 ATTWKKYDF--CVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLD 160
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D YV +S++ MY G++ +K+FDEM D+D+VSWN ISG+ K ++A+ +F M
Sbjct: 161 GDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEM 220
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
R+ PDE T+VS L AC L +L LG+ + ++ +++E MG+AL+DMY KCG
Sbjct: 221 REE-GFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCG- 278
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L AR +FD P +D+V W A+I GY Q
Sbjct: 279 ------------------------------DLISARRVFDSMPNKDVVTWNAIITGYAQN 308
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+EA+ LF M+ PD+ ++ +L+ C+ +GAL+ GKW+ + +E + D VA
Sbjct: 309 GASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVA 368
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI--SGG 417
+ALI+MYAKCG ++ A+ +F + K+ SW ++I LA +G+ +AL LF +M +G
Sbjct: 369 SALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGT 428
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P+DITFIGVLSAC H GLVDEGR+ F +M + + PK+EHY C++DL RAGLL EA
Sbjct: 429 VQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEA 488
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
+LI+K+P + +EI++ G+LL AC+ N D+GE++ L ++E +S + + + IY
Sbjct: 489 WDLIKKMPGKPDEIVL---GSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIY 545
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
A+ RW+D +R M++ GV K PGCS I+I +HEF GD H+ IY +L+
Sbjct: 546 ANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLLNEEM 605
Query: 598 K 598
K
Sbjct: 606 K 606
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 349/600 (58%), Gaps = 42/600 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
LKQ + + GL + L+ ++ T +L Y +F + +P + +N +I+
Sbjct: 23 HLKQTTSILITSGLAHHTFFLSDILRSATK----DLGYTLLLFDRLATPYIFLWNTIIRG 78
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
F+ + L+ +S+LR GV PD T+P + KA L + + + ++VK GL+FD
Sbjct: 79 FSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQFYAHIVKFGLDFD 137
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V NS++ + G + ++LF E KDVVSW I+G ++ R +A++ F MR
Sbjct: 138 AFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRS 197
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCL 240
+ DE T+VS L A L+++ G+ +H + + + + +G+AL+DMY KC
Sbjct: 198 S-GVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKC--- 253
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
G + A +F+ P R++V W A+I GYVQ N
Sbjct: 254 ----------------------------GYCDDAVKVFNEMPTRNLVSWGALIAGYVQCN 285
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
R+ EA+ +F+EM I ++P++ + + LT CAQLG+L+QG+W+H Y++ +++ +++ + T
Sbjct: 286 RYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGT 345
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL++MY+KCG +++AL +F +L KD WT++I GLAM G +L LFSQMI +P
Sbjct: 346 ALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQP 405
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
+ +TF+GVLSAC+HGGLVDEG F M Y+++P ++HYGC++DLLGRAG L+EA +
Sbjct: 406 NGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKF 465
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P E + +GAL S C I+ ++GE + L K++ S + LLAN+Y+
Sbjct: 466 IESMPMEPTPGV---WGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRC 522
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+WE NVR+ MK GV K PGCS IE+NG+IHEF+ D SH+E +Y ML+ ++ L
Sbjct: 523 QKWEAAANVRRLMKGKGVDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQL 582
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/606 (35%), Positives = 350/606 (57%), Gaps = 74/606 (12%)
Query: 24 NKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER 82
++L+ FC P L YA +F +I P L +N++ + A +L L+ +
Sbjct: 10 SQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISL 69
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK---- 138
G+ P+ FT+PF+ K+ K+G+++HG+V+K G + D YV S++ MY G+
Sbjct: 70 GLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDA 129
Query: 139 ---------------------------ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE 171
I + +K+FDE+P KDVVSWN ISG+ + ++
Sbjct: 130 QKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYK 189
Query: 172 DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNAL 230
A+++F+ M + N+ PDE T+ + +SAC ++ELG+++H +IN + + + NAL
Sbjct: 190 KALELFKEMMK-TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNAL 248
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+D+Y KCG ++E A +L + +D++ W
Sbjct: 249 IDLYSKCG-------------------------------EVETACELLEGLSNKDVISWN 277
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
+I GY N + EA+ LF+EM P+ ++++L CA LGA++ G+WIH YI++
Sbjct: 278 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK 337
Query: 351 R----ITVDAVVATALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINK 405
+T + + T+LI+MYAKCG I+ A ++ + ++W ++I G AM+G+ N
Sbjct: 338 LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANA 397
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A ++FS+M G +PDDITF+G+LSACSH G++D GR F +M + Y I PKLEHYGC+I
Sbjct: 398 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMI 457
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DLLG +GL EAEE+I +P E + +I + +LL AC+I+GN+++GE A L KIE +
Sbjct: 458 DLLGHSGLFKEAEEMINTMPMEPDGVI---WCSLLKACKIHGNLELGESFAKKLIKIEPE 514
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGV-RKVPGCSSIEINGIIHEFLVGDPSHS 584
+ + LL+NIYA+A +W +V +R + + G+ +KVPGCSSIEI+ ++HEF++GD H
Sbjct: 515 NPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHP 574
Query: 585 EMKEIY 590
+ +EIY
Sbjct: 575 QNREIY 580
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/598 (36%), Positives = 343/598 (57%), Gaps = 44/598 (7%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q+ QI AQ+ L + ++L+ + N+ YAE +F I P N ++K
Sbjct: 25 SQILQIHAQLITTNLISDTFAASRLLDSVVSKTL-NVNYAELVFAQIHQPNSFICNTMVK 83
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + + ++L ++++R +G+ DN+TYPFV KA G + + +G V G VK G
Sbjct: 84 CYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGG 143
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D +V N ++ MY G+ + +FD +KD+VSWN + G+V C E+A ++F
Sbjct: 144 DVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMF---- 199
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK-CGCL 240
+ MP+ V ++ ++D Y K G +
Sbjct: 200 ---DEMPERDVVSWSI--------------------------------MIDGYGKKMGEV 224
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ AR FD MP ++++ W SM+ GY G++E AR++FD+ ++++ W+ MI+GY Q
Sbjct: 225 NRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHR 284
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LFR+M +KPD+ +V ++ C+QLGAL+QG+WIH Y+ NR+ +D VV T
Sbjct: 285 DSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQT 344
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL++MY KCG ++A IF + E++ SW +I GL MNG +ALE F+QM
Sbjct: 345 ALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPM 404
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DD+ F+GVL ACSH LV EG FN M VY+++PKLEHYGCL+DLLGRAG LD+ + +
Sbjct: 405 DDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNI 464
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+ +P + N L+G+LL ACRI+ NV + E + L ++++ DS + L++NIYA
Sbjct: 465 IQSMPMKPN---AALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADV 521
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
WE + +R+ MKE ++K G S IE++G + EF+ G+ SH +EI ++ +AK
Sbjct: 522 GMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAK 579
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 357/609 (58%), Gaps = 14/609 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
Q+F Q+N T N ++ T G L A+ +F S+ +N ++ FA+
Sbjct: 76 QLFDKMPQRNVFTWNSVVTGLTKL--GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
++L F+ + + G + +T+ A L ++ +G ++H + K+ D Y+ +++
Sbjct: 134 EEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSAL 193
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY G + + +++FDEM D++VVSWN I+ + + +A+ VF+ M + + PD
Sbjct: 194 VDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESW-VEPD 252
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQ--ELEFTPIMGNALLDMYCKCGCLSEARELF 247
E T+ S +SAC +L +++G+E+H + + +L I+ NA +DMY KC + EAR +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D MP +NVI TSMVSGY + AR +F + R++V W A+I GY Q +EA++
Sbjct: 313 DSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH------GYINENRITVDAVVATA 361
LF ++ + P + +L CA L L G H G+ ++ D V +
Sbjct: 373 LFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MY KCG +E+ +F ++ E+D SW ++I G A NG N+ALELF +M+ G KPD
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPD 492
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
IT IGVLSAC H G V+EGR +F++MT + + P +HY C++DLLGRAG L+EA+ +I
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSII 552
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
++P + + +I +G+LL+AC+++ N+ +G+ +A L ++E+ +S + LL+N+YA
Sbjct: 553 EEMPVQPDSVI---WGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELG 609
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
+W D NVR+ M++ GV K PGCS I+I G H F+V D SH K+I+S+LD + +
Sbjct: 610 KWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Query: 602 DSKQNAMEG 610
+ +A G
Sbjct: 670 QKQDHAETG 678
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 141/261 (54%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N L+D Y KCG L + R+LFD+MP +NV W S+V+G G L++A LF P RD
Sbjct: 59 NRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W +M++G+ Q +R +EA+ F M +++ + L+ C+ L + +G IH I
Sbjct: 119 TWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLI 178
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
++ D + +AL++MY+KCG + A ++F E+ +++ SW S+I NG +AL
Sbjct: 179 AKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEAL 238
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
++F M+ +PD++T V+SAC+ + G+ + ++ +++ + +D+
Sbjct: 239 KVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDM 298
Query: 468 LGRAGLLDEAEELIRKIPNEN 488
+ + EA + +P N
Sbjct: 299 YAKCSRIKEARFIFDSMPIRN 319
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 201/443 (45%), Gaps = 99/443 (22%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
VH V+K+G + ++ N ++D Y G + + ++LFD+MP ++V +WN ++G K
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 170 FEDAVDVFRRM--RQGCN----------------------LMPDEG------TVVSTLSA 199
++A +FR M R C +M EG T S LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 200 CTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
C+ L ++ G +IH I + + + +G+AL+DMY KCG +++A+++FDEM ++NV+ W
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
S+++ Y G +A +F M+ +V+
Sbjct: 222 NSLITCYEQNGPAVEALKVFQ-----------VMLESWVE-------------------- 250
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCGLIEKALE 377
PD+ L ++++ CA L A++ G+ +H + +++ D +++ A ++MYAKC I++A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 378 I-------------------------------FYELREKDAASWTSIICGLAMNGKINKA 406
I F ++ E++ SW ++I G NG+ +A
Sbjct: 311 IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG-RRFFNTMTEVYQIQPKLEHY---- 461
L LF + P TF +L AC+ + G + + + ++ Q E
Sbjct: 371 LSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 462 GCLIDLLGRAGLLDEAEELIRKI 484
LID+ + G ++E + RK+
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKM 453
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/599 (37%), Positives = 351/599 (58%), Gaps = 15/599 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F Q+N T N L+ T G L A ++FGS+ P ++N ++ FA+ F
Sbjct: 71 KLFDRMPQRNTFTWNSLISVLTKS--GFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRF 128
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+SL F K+ + +++ A L ++ G +VH V K+ D Y+ +++
Sbjct: 129 EESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSAL 188
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY G + +++F M ++++V+WN I+ + + +A++VF RM L PD
Sbjct: 189 IDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDS-GLEPD 247
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELF 247
E T+ S +SAC +L L+ G +IH + + +F ++GNAL+DMY KC ++EAR +F
Sbjct: 248 EVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D M +NV+ TSMVSGY ++ AR +F + R++V W A+I GY Q +EA+
Sbjct: 308 DRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH------GYINENRITVDAVVATA 361
LFR ++ + P + LL+ CA L L G+ H G+ ++ D V +
Sbjct: 368 LFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNS 427
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MY KCG IE +F +++E+D SW +II G A NG +AL++F +M+ G KPD
Sbjct: 428 LIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPD 487
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+T IGVL ACSH GLV+EGR +F +M E + + P +HY C++DLLGRAG L+EA+ LI
Sbjct: 488 HVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLI 546
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P + ++ +G+LL+AC+++GN++MG+ A L +I+ +S + LL+N+YA
Sbjct: 547 EAMPVNPDAVV---WGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELG 603
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
RW DV VR+ M++ GV K PGCS IE+ +H FLV D SH K+IYS+L + + +
Sbjct: 604 RWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQM 662
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 161/303 (53%), Gaps = 1/303 (0%)
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
+P+ L +C ++ + +H R + + + N L+D+Y KC CL +AR+
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
LFD MP +N W S++S G L++A LF P D W +M++G+ Q +RF+E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ F +M +++ + L+ CA L L G +H ++++R + D + +ALI+M
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
Y+KCG + A E+F + E++ +W S+I NG ++ALE+F +M+ G +PD++T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
V+SAC+ + EG + + + + + L L+D+ + ++EA + ++
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 486 NEN 488
N
Sbjct: 312 IRN 314
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 202/457 (44%), Gaps = 105/457 (22%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK----------------- 152
VH ++ T + ++ N ++D+YG + + +KLFD MP +
Sbjct: 37 VHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGF 96
Query: 153 --------------DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
D SWN +SG + RFE++++ F +M + + + +E + S LS
Sbjct: 97 LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHRE-DFLLNEYSFGSALS 155
Query: 199 ACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC L +L +G ++H +++ T + MG+AL+DMY KCG ++ A E+F M +N++
Sbjct: 156 ACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVT 215
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W S+++ Y G +A ++F R M L
Sbjct: 216 WNSLITCYEQNGPASEALEVFVR-------------------------------MMDSGL 244
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCGLIEKAL 376
+PD+ L ++++ CA L AL++G IH + N+ D V+ AL++MYAKC + +A
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 377 EI-------------------------------FYELREKDAASWTSIICGLAMNGKINK 405
+ F ++ +++ SW ++I G NG+ +
Sbjct: 305 RVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEE 364
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR-FFNTMTEVYQIQPKLEH---- 460
AL LF + P TF +LSAC++ + GR+ + + + ++ Q E
Sbjct: 365 ALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFV 424
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIV 493
LID+ + G +++ + K+ + N IIV
Sbjct: 425 GNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIV 461
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/621 (35%), Positives = 343/621 (55%), Gaps = 77/621 (12%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
++ LI ++ K + +++ +R DNF P V KA + G++VHG+VV
Sbjct: 92 HSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVV 151
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K G D +VCN+++ MY +G + + LFD++ +KDVVSW+ I + + ++A+D
Sbjct: 152 KNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALD 211
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPI-MGNALLD 232
+ R M + P E ++S L +L+LGK +H Y+ N + + + + AL+D
Sbjct: 212 LLRDMHV-MRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALID 270
Query: 233 MYCK-------------------------------CGCLSEARELFDEM------PNK-- 253
MY K C L+E LF +M PN+
Sbjct: 271 MYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEIT 330
Query: 254 -------------------------------NVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+++ T+ + Y CG + AR +FD
Sbjct: 331 MLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFK 390
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+D+++W+AMI+ Y Q N DEA +F M ++P++ +V+LL CA+ G+LE GKW
Sbjct: 391 SKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKW 450
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH YI++ I D ++ T+ ++MYA CG I+ A +F E ++D + W ++I G AM+G
Sbjct: 451 IHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGH 510
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
ALELF +M + G P+DITFIG L ACSH GL+ EG+R F+ M + PK+EHYG
Sbjct: 511 GEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYG 570
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C++DLLGRAGLLDEA ELI+ +P N + ++G+ L+AC+++ N+ +GE A +
Sbjct: 571 CMVDLLGRAGLLDEAHELIKSMPMRPN---IAVFGSFLAACKLHKNIKLGEWAAKQFLSL 627
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E S ++ L++NIYASANRW DV +R+ MK+ G+ K PG SSIE+NG++HEF++GD
Sbjct: 628 EPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDRE 687
Query: 583 HSEMKEIYSMLDRMAKTLLDS 603
H + K++Y M+D M + L D+
Sbjct: 688 HPDAKKVYEMIDEMREKLEDA 708
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 167/344 (48%), Gaps = 34/344 (9%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
NL YA ++F + ++++ +I A+ + + + LF K+ G+ P+ T + K
Sbjct: 277 NLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVK 336
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
G G ++ G+ +H + ++ G + + +DMYG G + + + +FD KD++
Sbjct: 337 ECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMM 396
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
W+ IS + + ++A D+F M GC + P+E T+VS L C +LE+GK IH YI
Sbjct: 397 WSAMISSYAQNNCIDEAFDIFVHM-TGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYI 455
Query: 217 N-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ Q ++ I+ + +DMY CG + A LF E ++++ W +M+SG+ G E A
Sbjct: 456 DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAAL 515
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+LF+ EM+ + + P+ + L C+ G
Sbjct: 516 ELFE-------------------------------EMEALGVTPNDITFIGALHACSHSG 544
Query: 336 ALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
L++GK + H ++E T ++++ + GL+++A E+
Sbjct: 545 LLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHEL 588
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 7/284 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F S +S L+ ++ +I ++A+ ++ +F + G+ P+ T +
Sbjct: 377 GDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLL 436
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
G ++ G+ +H Y+ K G++ D + S +DMY G I +LF E D+D+
Sbjct: 437 MICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDIS 496
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
WN ISG E A+++F M + + P++ T + L AC+ L+ GK +
Sbjct: 497 MWNAMISGFAMHGHGEAALELFEEM-EALGVTPNDITFIGALHACSHSGLLQEGKRLFHK 555
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG---YVNCG 269
+ E FTP + + ++D+ + G L EA EL MP + N+ + S ++ + N
Sbjct: 556 MVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIK 615
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
E A F M N Y NR+ + + R M+
Sbjct: 616 LGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMK 659
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 335/576 (58%), Gaps = 10/576 (1%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F I P + YN + +A+ R++L L + RGV P+ FT PFV KA
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
VHG +K G +V N+++ Y G + + ++ FDEM ++VVSWN I G
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT 223
+ + +A +F MR+ + DE T+ S L AC+ NLE G+ +H + + +
Sbjct: 121 YAQAGDTREACALFGEMRRQ-GFLGDEFTLASLLLACSQEGNLEFGRLVHCLM--LVSGS 177
Query: 224 P---IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
P I+G AL+DMY KCG L AR F+ MP K+V+ WTSM+ G ++ AR FD
Sbjct: 178 PVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDH 237
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P R+ V W MI+ YVQ ++ EA+ L+++MQ PD+ LV +L+ C ++G L G
Sbjct: 238 MPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVG 297
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K +H YI +N D + +L++MYAKCG ++ A+ +F E+ ++ SW II GLAM+
Sbjct: 298 KMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMH 357
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ A+ F M+ PD ITF+ +LS+CSHGGL++ G+ +F +M VY ++ ++EH
Sbjct: 358 GRALDAITFFRSMVR-NTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEH 416
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C++DLLGR G L++A LI+++P + + ++ +GALL ACRI+GNV +G+++ L
Sbjct: 417 YACMVDLLGRRGHLEKAVCLIKEMPMKPDVVV---WGALLGACRIHGNVKIGKQVIKQLL 473
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++E L++N+ N+WED+ +R+ MKE G RK G SSIEIN IHEF V D
Sbjct: 474 ELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIHEFGVED 533
Query: 581 PSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDNLVAI 616
H EIY+++D+++ L+ A+ + L +
Sbjct: 534 IRHESSSEIYAVVDQLSYHLISVHPLAVHPEELCVV 569
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 192/426 (45%), Gaps = 72/426 (16%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
++ S G+L + + F + ++++N +I +A+ G R++ LF ++R +G D FT
Sbjct: 89 SYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFT 148
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
+ A G ++ G VH ++ +G D + +++DMY G +C ++ F+ MP
Sbjct: 149 LASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMP 208
Query: 151 DKDV-------------------------------VSWNVSISGHVKCMRFEDAVDVFRR 179
K V VSWN IS +V+ ++ +A+D++++
Sbjct: 209 IKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQ 268
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCG 238
M Q PDE T+V LSAC + +L +GK +H YI + I + N+LLDMY KCG
Sbjct: 269 M-QSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCG 327
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A LF EM N+NV+ W +I G
Sbjct: 328 QVDTAIRLFREMCNRNVVSW-------------------------------NVIIGGLAM 356
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAV 357
R +A+ FR M + PD VALL+ C+ G LE G+ + + + +
Sbjct: 357 HGRALDAITFFRSM-VRNTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVE 415
Query: 358 VATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQM--- 413
++++ + G +EKA+ + E+ K D W +++ ++G + ++ Q+
Sbjct: 416 HYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLEL 475
Query: 414 --ISGG 417
ISGG
Sbjct: 476 EGISGG 481
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 13/242 (5%)
Query: 28 VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPD 87
+ C HG++ A F + +++N +I + ++G + ++L L+ +++ G +PD
Sbjct: 218 MLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPD 277
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD 147
T V A G +G++ G+ VH Y+ D + NS++DMY G++ +LF
Sbjct: 278 EATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFR 337
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
EM +++VVSWNV I G R DA+ FR M + N PD T V+ LS+C+ LE
Sbjct: 338 EMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVR--NTSPDGITFVALLSSCSHGGLLE 395
Query: 208 LGKEI-----HRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK-NVICWTS 260
G+ H Y + E+E M +D+ + G L +A L EMP K +V+ W +
Sbjct: 396 TGQHYFESMRHVYNVKHEVEHYACM----VDLLGRRGHLEKAVCLIKEMPMKPDVVVWGA 451
Query: 261 MV 262
++
Sbjct: 452 LL 453
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/608 (38%), Positives = 332/608 (54%), Gaps = 56/608 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMV---FCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ + QI AQ+ + L Q+ KL+ C H L A +F + P + YN
Sbjct: 34 LDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRH-----LASAVNVFNHVPHPNVHLYN 88
Query: 58 LLIKAFAKKGSFRKSLLL--FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+I+A A S SL F ++++ G+ PDNFTYPF+ KA + +H +V
Sbjct: 89 SIIRAHAHNTS-HPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVE 147
Query: 116 KTGLEFDTYVCNSIMDMYGVLGK--ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
K G D +V NS++D Y G + LF M ++DVV+WN I G V+C E A
Sbjct: 148 KFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGA 207
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDM 233
+F M E +VS N +LD
Sbjct: 208 CKLFDEM--------PERDMVSW-------------------------------NTMLDG 228
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y K G + A ELF+ MP +N++ W++MV GY G ++ AR LFDR P +++VLWT +I
Sbjct: 229 YAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTII 288
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY + EA L+ +M+ L+PD L+++L CA+ G L GK IH + R
Sbjct: 289 AGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFR 348
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYE-LREKDAASWTSIICGLAMNGKINKALELFSQ 412
V A I+MYAKCG ++ A ++F + +KD SW S+I G AM+G KALELFS+
Sbjct: 349 CGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSR 408
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M+ G +PD TF+G+L AC+H GLV+EGR++F +M +VY I P++EHYGC++DLLGR G
Sbjct: 409 MVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGG 468
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
L EA L+R +P E N II+ G LL+ACR++ +VD + L K+E D ++L
Sbjct: 469 HLKEAFTLLRSMPMEPNAIIL---GTLLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSL 525
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+NIYA A W +V NVR +M G +K G SSIE+ +HEF V D SH + +IY M
Sbjct: 526 LSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYKM 585
Query: 593 LDRMAKTL 600
+DR+ + L
Sbjct: 586 IDRLVQDL 593
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/596 (36%), Positives = 356/596 (59%), Gaps = 9/596 (1%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI I ++G ++ N L+ F + G L A K+F + ++++ +I +A+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 66 KGSFRKSL-LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ + ++ L F +R+ V+P++ T V A L +++ GEKV+ ++ +G+E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++++DMY I K+LFDE ++ N S +V+ +A+ VF M
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS- 331
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD +++S +S+C+ L+N+ GK H Y+ E + NAL+DMY KC A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+FD M NK V+ W S+V+GYV G+++ A + F+ P ++IV W +I+G VQ + F+
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 304 EAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ +F MQ + D ++++ + C LGAL+ KWI+ YI +N I +D + T L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++M+++CG E A+ IF L +D ++WT+ I +AM G +A+ELF MI G KPD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+ F+G L+ACSHGGLV +G+ F +M +++ + P+ HYGC++DLLGRAGLL+EA +LI
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P E N++I + +LL+ACR+ GNV+M A ++ + + + + LL+N+YASA R
Sbjct: 632 DMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
W D+ VR MKE G+RK PG SSI+I G HEF GD SH EM I +MLD +++
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 248/522 (47%), Gaps = 69/522 (13%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMV-FCTHPSHGNLLYAEKIFGSIQS--PCLLAYNLL 59
+LK + + GL + T+ KL+ C + +L +A+++F + +S C + YN L
Sbjct: 47 ELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM-YNSL 105
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ +A G +++LLF ++ G+SPD +T+PF A G ++HG +VK G
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++ Y G++ + +K+FDEM +++VVSW I G+ + +DAVD+F R
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M + + P+ T+V +SAC L++LE G++++ +I N +E +M +AL+DMY KC
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A+ LFDE N+ +M S YV G
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR-------------------------- 319
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
EA+ +F M ++PD+ +++ ++ C+QL + GK HGY+ N +
Sbjct: 320 -----EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM----- 413
ALI+MY KC + A IF + K +W SI+ G NG+++ A E F M
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 414 ------ISG---------------------GAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
ISG G D +T + + SAC H G +D + +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ E IQ + L+D+ R G + A + + N +
Sbjct: 495 YI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/596 (36%), Positives = 356/596 (59%), Gaps = 9/596 (1%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI I ++G ++ N L+ F + G L A K+F + ++++ +I +A+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 66 KGSFRKSL-LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ + ++ L F +R+ V+P++ T V A L +++ GEKV+ ++ +G+E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++++DMY I K+LFDE ++ N S +V+ +A+ VF M
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS- 331
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD +++S +S+C+ L+N+ GK H Y+ E + NAL+DMY KC A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+FD M NK V+ W S+V+GYV G+++ A + F+ P ++IV W +I+G VQ + F+
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 304 EAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ +F MQ + D ++++ + C LGAL+ KWI+ YI +N I +D + T L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++M+++CG E A+ IF L +D ++WT+ I +AM G +A+ELF MI G KPD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+ F+G L+ACSHGGLV +G+ F +M +++ + P+ HYGC++DLLGRAGLL+EA +LI
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P E N++I + +LL+ACR+ GNV+M A ++ + + + + LL+N+YASA R
Sbjct: 632 DMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
W D+ VR MKE G+RK PG SSI+I G HEF GD SH EM I +MLD +++
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 248/522 (47%), Gaps = 69/522 (13%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMV-FCTHPSHGNLLYAEKIFGSIQS--PCLLAYNLL 59
+LK + + GL + T+ KL+ C + +L +A+++F + +S C + YN L
Sbjct: 47 ELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM-YNSL 105
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ +A G +++LLF ++ G+SPD +T+PF A G ++HG +VK G
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++ Y G++ + +K+FDEM +++VVSW I G+ + +DAVD+F R
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M + + P+ T+V +SAC L++LE G++++ +I N +E +M +AL+DMY KC
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A+ LFDE N+ +M S YV G
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR-------------------------- 319
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
EA+ +F M ++PD+ +++ ++ C+QL + GK HGY+ N +
Sbjct: 320 -----EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM----- 413
ALI+MY KC + A IF + K +W SI+ G NG+++ A E F M
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 414 ------ISG---------------------GAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
ISG G D +T + + SAC H G +D + +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ E IQ + L+D+ R G + A + + N +
Sbjct: 495 YI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/600 (36%), Positives = 348/600 (58%), Gaps = 51/600 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+LKQ QIF GLQ + L KL+ + A+NLL A
Sbjct: 17 ELKQTHLQIFIHGLQHSDFMLPKLITVSS-----------------------AFNLLDYA 53
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ +++L ++S+++ V ++FT+ F+ K ++ G +HG ++K G
Sbjct: 54 -----THKEALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSS 108
Query: 123 TYVCNSIMDMYGVLGK-ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+V NS++ Y + + + ++F+EMP++DV+SWN IS ++ + A+ + +M
Sbjct: 109 VFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKM- 167
Query: 182 QGCNLMPDEGTVVSTLSACTALK--NLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
P+ V C K N+EL H Q + N+++ Y + G
Sbjct: 168 ------PERNIVTWNSVVCGLSKAGNMELA---HSVFEQMPLRNEVSWNSMISGYVRIGD 218
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A+ +F +MP K V+ WT+M+SGY G L+ A ++F+ PV+++V W AMI+GYV
Sbjct: 219 VRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHN 278
Query: 300 NRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ FD+A+ +F M I +PD+ L+++L+ CA LG+LE GKWI+ YI +N++ + +
Sbjct: 279 HEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPL 338
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI+M+AKCG +E A E+F+ + ++ +WT+++ GLA+NGK +A+ LF +M G
Sbjct: 339 GNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGT 398
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPDD+ FI VLSAC+HGGLV+EG+R F+ M + + I+P++EHYGC++DLLGRAG L+EA
Sbjct: 399 KPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAV 458
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI---ESKDSSFHTLLAN 535
++ + N +I + LL C+I+GN G+ L ++ EKI E + S+ TL++N
Sbjct: 459 RFTARMHLKPNAVI---WATLLFCCKIHGN---GDLLKSVTEKIMDQEPSNPSYLTLVSN 512
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
+ AS RWEDV + R M++ + KVPGCSSI++ +HEFL D H + KEIY L
Sbjct: 513 LSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRALSH 572
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/600 (36%), Positives = 360/600 (60%), Gaps = 9/600 (1%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI I ++ ++ N L+ F + G L A K+F + ++++ +I +A+
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHF--YAECGELDCARKVFDEMSERNVVSWTSMICGYAR 211
Query: 66 KGSFRKSL-LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ + ++ L F +R+ V P++ T V A L +++ GEKV+ ++ +G+E +
Sbjct: 212 REFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDL 271
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++++DMY I K+LFDE ++ N S +V+ ++A+ V M
Sbjct: 272 MISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDS- 330
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD +++S +S+C+ L+N+ GK H Y+ E + NAL+DMY KC A
Sbjct: 331 GIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 390
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+FD M NK V+ W S+V+GY+ G+++ A + F+ P ++IV W +I+ VQ N ++
Sbjct: 391 FRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYE 450
Query: 304 EAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ +F MQ + D ++++ + C LGAL+ KWI+ YI +NRI +D + T L
Sbjct: 451 EAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTL 510
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++M+++CG E A+ IF L +D ++WT+ I +AM G + +A+ELF++MI G KPD
Sbjct: 511 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDG 570
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+ FIG L+AC HGGLV +G+ FN+M +++ + P+ HYGC++DLLGRAGLL+EA +LI+
Sbjct: 571 VVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIK 630
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P E N++I + +LL+ACR+ GNV+M A ++ + + + + LL+N+YASA R
Sbjct: 631 DMPTEPNDVI---WNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGR 687
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
W D+ VR MKE G+RK PG S I+I G HEF GD SH EM++I +MLD +++ D
Sbjct: 688 WNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASD 747
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 246/522 (47%), Gaps = 69/522 (13%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMV-FCTHPSHGNLLYAEKIF--GSIQSPCLLAYNLL 59
+LK + + GL + + KL+ C + +L +A+++F G C + YN L
Sbjct: 46 ELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFM-YNSL 104
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ +A G ++++LLF ++ G+SPD +T+PF + G ++HG ++K
Sbjct: 105 IRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDY 164
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++ Y G++ +K+FDEM +++VVSW I G+ + +DAVD+F R
Sbjct: 165 AKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFR 224
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCG 238
M + +++P+ T+V +SAC L++LE G++++ +I +E +M +AL+DMY KC
Sbjct: 225 MVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCN 284
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A+ LFDE N+ +M S YV G +
Sbjct: 285 AIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTK-------------------------- 318
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
EA+ + M ++PD+ +++ ++ C+QL + GK HGY+ N +
Sbjct: 319 -----EALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 373
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM----- 413
ALI+MY KC + A IF + K +W SI+ G NG+++ A E F+ M
Sbjct: 374 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNI 433
Query: 414 ------ISGGAKP---------------------DDITFIGVLSACSHGGLVDEGRRFFN 446
IS + D +T + + SAC H G +D + +
Sbjct: 434 VSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYY 493
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ E +IQ + L+D+ R G + A + + N +
Sbjct: 494 YI-EKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 534
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 333/549 (60%), Gaps = 8/549 (1%)
Query: 23 LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER 82
N L + P+ N+L A ++F I P L +N++I+ +++ +++ ++ + +
Sbjct: 733 FNLLKSYALSPT--NILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQ 790
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV 142
+ +N TYPF+ KA + V VH V+K G + D +V N+++ Y ++
Sbjct: 791 ALFGNNLTYPFLLKACARISNVS-CTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFA 849
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
+K+FDEM ++D+VSWN I G+ +C R+ + + VF MR ++ D T+V + ACT
Sbjct: 850 RKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMA-DVKGDAVTMVKVVLACTV 908
Query: 203 LKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L + + YI + ++E +GN L+DMY + + AR +FD M ++N++ W +M
Sbjct: 909 LGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAM 968
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ GY G L AR LFD P RD++ WT+MI+ Y Q +F +AV LF+EM + ++KPD+
Sbjct: 969 IMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDE 1028
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
+ ++L+ CA +GAL+ G+ +H YI + + D V ALI+MY KCG +EK L +F E
Sbjct: 1029 ITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEE 1088
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ ++D+ SWTS+I GLA+NG + AL LFS M+ G +P TF+GVL AC+H G+VD+G
Sbjct: 1089 MGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKG 1148
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
+F +M VY + P+++HYGC++DLL R+G L A E I+++P + + ++ + LLS
Sbjct: 1149 LEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVV---WRILLS 1205
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
A +++GN+ + E L + + +S + L +N YA +NRWEDV +R+ M+E V K
Sbjct: 1206 ASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKP 1265
Query: 562 PGCSSIEIN 570
SS+EIN
Sbjct: 1266 SASSSVEIN 1274
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/589 (37%), Positives = 355/589 (60%), Gaps = 14/589 (2%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G +P + L+ F + L ++ +F I +P L +NL+I+AF+ + +L
Sbjct: 5 GRHHDPFLMTPLISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALS 64
Query: 75 LFSKLRERG--VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDM 132
L+ K+ + PD FT+PF+ K+ L + G +VH +V K+G E + +V N+++ +
Sbjct: 65 LYKKMLSSSPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQV 124
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y V G N ++FDE P +D VS+N I+G V+ R ++ +F MR G + PDE T
Sbjct: 125 YFVFGDARNACRVFDESPVRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGF-VEPDEYT 183
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEF---TPIMGNALLDMYCKCGCLSEARELFDE 249
V+ LSAC+ L++ +G+ +H + ++L ++ NAL+DMY KCGCL A +
Sbjct: 184 FVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENELLVNALVDMYAKCGCLEVAERVVRN 243
Query: 250 MPNKN-VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
K+ V WTS+VS Y G++E AR LFD+ RD+V WTAMI+GY F EA+ L
Sbjct: 244 GNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALEL 303
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN--RITVDAVVATALIEMY 366
F E++ + ++PD+ ++VA L+ CA+LGALE G+ IH + + + + A+++MY
Sbjct: 304 FVELEDLGMEPDEVVVVAALSACARLGALELGRRIHHKYDRDSWQCGHNRGFTCAVVDMY 363
Query: 367 AKCGLIEKALEIFYELRE--KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
AKCG IE AL++F + + K + SI+ GLA +G+ A+ LF +M G +PD++T
Sbjct: 364 AKCGSIEAALDVFLKTSDDMKTTFLYNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVT 423
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
++ +L AC H GLVD G+R F +M Y + P++EHYGC++DLLGRAG L+EA LI+ +
Sbjct: 424 YVALLCACGHSGLVDHGKRLFESMLSEYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNM 483
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P + N +I + ALLSAC++ G+V++ + L +E+ + + +L+N+ ++ +
Sbjct: 484 PFKANAVI---WRALLSACKVDGDVELARLASQELLAMENDHGARYVMLSNMLTLMDKHD 540
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+ +VR+ + +G++K PG S +E+NG +H+FL GD SH E K ML
Sbjct: 541 EAASVRRAIDNVGIQKPPGWSHVEMNGTLHKFLAGDKSHPEAKATEFML 589
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/592 (35%), Positives = 354/592 (59%), Gaps = 7/592 (1%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ + ++GL ++ N L+ F + + G + K+F + ++++ LI ++
Sbjct: 143 QVHGVVVKMGLVKDLFVANSLIHF--YAACGKVDLGRKVFDEMLERNVVSWTSLINGYSV 200
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
++++ LF ++ E GV P+ T A L +++ G+KV + + G++ +T V
Sbjct: 201 VNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLV 260
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N+++DMY G + V+++FDE DK++V +N +S +V+ + + V M Q
Sbjct: 261 VNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQK-G 319
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEAR 244
PD+ T++ST++AC L +L +GK H Y+ + LE + NA++DMY KCG A
Sbjct: 320 QRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAAC 379
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
++FD M NK V+ W S+++G V G+LE A +F P ++V W MI VQ + F+E
Sbjct: 380 KVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEE 439
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A+ L REMQ +K D+ +V + + C LGAL+ KWI+ YI +N I +D + TAL++
Sbjct: 440 AIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVD 499
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
M+++CG A+ +F + ++D ++WT+ I A+ G A+ELF +M+ K DD
Sbjct: 500 MFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFV 559
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ +L+A SHGG VD+GR+ F M +++ + P++ HYGC++DLLGRAGLL+EA +L++ +
Sbjct: 560 FVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSM 619
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P + N++I +G+ L+ACR + NV+ + ++ + H LL+NIYASA +W
Sbjct: 620 PIKPNDVI---WGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWN 676
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
DV VR +MKE G +KV G SSIE++G+I EF GD SH+E +I ML +
Sbjct: 677 DVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEI 728
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 247/508 (48%), Gaps = 73/508 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTH-PSHGNLLYAEKIFGSIQ-SPC-LLAYN 57
+ +LKQ+ + + G+ +NKL+ C +H +L YA F + + C L N
Sbjct: 35 LIELKQLHCNMLKKGVFN----INKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCN 90
Query: 58 LLIKAFAKKGSFRKSLLLF-SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
LI+ +A G ++++ ++ + G+ PDNFT+PF+ A + +G +VHG VVK
Sbjct: 91 TLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVK 150
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
GL D +V NS++ Y GK+ +K+FDEM +++VVSW I+G+ ++AV +
Sbjct: 151 MGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCL 210
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYC 235
F M + + P+ T+V +SAC LK+LELGK++ + + ++ ++ NALLDMY
Sbjct: 211 FFEMVE-VGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYM 269
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG + RE+FDE +KN++ + +++S
Sbjct: 270 KCGDMYAVREIFDEFSDKNLVMYNTIMS-------------------------------N 298
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
YVQ E + + EM +PDK +++ + CAQLG L GK H Y+ N +
Sbjct: 299 YVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERL 358
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
++ A+I+MY KCG E A ++F + K +W S+I GL +G++ AL +F +M
Sbjct: 359 DNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPE 418
Query: 416 G-------------------------------GAKPDDITFIGVLSACSHGGLVDEGRRF 444
G K D +T +G+ SAC + G +D +
Sbjct: 419 SNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWI 478
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
+ T E I ++ L+D+ R G
Sbjct: 479 Y-TYIEKNDIHIDMQLGTALVDMFSRCG 505
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 151/313 (48%), Gaps = 18/313 (5%)
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCG---QLEKARDLFDRSPVRDIVLWT--A 291
C L E ++L M K V +++ V G L A + F L+T
Sbjct: 32 CKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNT 91
Query: 292 MINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
+I GY EA+ ++ M I+ + PD F LL+ C+++ A +G +HG + +
Sbjct: 92 LIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKM 151
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ D VA +LI YA CG ++ ++F E+ E++ SWTS+I G ++ +A+ LF
Sbjct: 152 GLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLF 211
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M+ G +P+ +T + +SAC+ ++ G++ N MTE+ ++ L+D+ +
Sbjct: 212 FEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTEL-GVKSNTLVVNALLDMYMK 270
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL---LEKIESKDS 527
G + E+ + ++N + +Y ++S +G GE L L L+K + D
Sbjct: 271 CGDMYAVREIFDEFSDKN----LVMYNTIMSNYVQHGLA--GEVLVVLDEMLQKGQRPDK 324
Query: 528 SFHTLLANIYASA 540
T+L+ I A A
Sbjct: 325 V--TMLSTIAACA 335
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/605 (37%), Positives = 332/605 (54%), Gaps = 52/605 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMV---FCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q+KQI AQ+ + L + KL+ C + A +F IQ P +L YN
Sbjct: 30 LNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQ-----MTLAVNVFNQIQDPDVLLYN 84
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+A + + +F ++++ GV DNFTYPF+ KA V+ E +H V K
Sbjct: 85 TLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKM 144
Query: 118 GLEFDTYVCNSIMDMYGVLG--KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
G D +V NS++D Y G + +K+F+ M ++D VSWN I G VK +A
Sbjct: 145 GFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARR 204
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+F + MP+ TV N +LD Y
Sbjct: 205 LF-------DEMPERDTV--------------------------------SWNTILDGYV 225
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G ++ A ELF++MP +NV+ W++MV GY G ++ AR LFD+ PV+++V WT MI+G
Sbjct: 226 KAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISG 285
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Y + +A+ L+ +M+ LK D ++++L+ CA G L GK +H I R
Sbjct: 286 YAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCS 345
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V+ ALI+MYAKCG +E AL IF+ + KD SW +II GLAM+G KAL+LFS+M
Sbjct: 346 TPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKG 405
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G PD +TF+GVL AC+H G VDEG +F+ M Y + P++EHYGC++DLLGR G L
Sbjct: 406 EGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLK 465
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA L+ +P E N II +G LL ACR++ + E++ L K E DS ++L+N
Sbjct: 466 EAFRLVHSMPLEPNAII---WGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSN 522
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYA+A W++ N+R +MK ++K G SSIE++ +HEF V D SH + IY +D
Sbjct: 523 IYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDG 582
Query: 596 MAKTL 600
+ + +
Sbjct: 583 LGQHI 587
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/598 (36%), Positives = 342/598 (57%), Gaps = 44/598 (7%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q+ QI AQ+ L + ++L+ + N+ YAE +F I P N ++K
Sbjct: 25 SQILQIHAQLITTNLISDTFAASRLLDSVVSKTL-NVNYAELVFAQIHQPNSFICNTMVK 83
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + + ++L ++++R++G+ DN+TYPFV KA G + + +G V G VK G
Sbjct: 84 CYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGG 143
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D +V N ++ MY G+ + +FD +KD+VSWN + G+V C E+A ++F
Sbjct: 144 DVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMF---- 199
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK-CGCL 240
+ MP+ V ++ ++D Y K G +
Sbjct: 200 ---DEMPERDVVSWSI--------------------------------MIDGYGKKMGEV 224
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ AR FD MP ++++ W SM+ GY G++E AR++FB+ ++++ W+ MI+GY
Sbjct: 225 NRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHR 284
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LFR+M +KPD+ +V ++ C+QLGAL+QG+WIH Y+ NR+ +D VV T
Sbjct: 285 DSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQT 344
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL++MY KCG ++A IF + E++ SW +I GL MNG +ALE F QM
Sbjct: 345 ALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPM 404
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DD+ F+GVL ACSH LV EG FN M VY+++PKLEHYGCL+DLLGRAG LD+ + +
Sbjct: 405 DDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNI 464
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+ +P + N L+G+LL ACRI+ NV + E + L ++++ DS + L++NIYA
Sbjct: 465 IQSMPMKPN---AALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADV 521
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
WE + +R+ MKE ++K G S IE++G + EF+ G+ SH +EI ++ +AK
Sbjct: 522 GMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAK 579
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/610 (36%), Positives = 358/610 (58%), Gaps = 25/610 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNL------LYAEKIFGSIQ----S 50
+ + QI +++ G NP ++++ + SH L L+ + FG +
Sbjct: 27 LHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDN 86
Query: 51 PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
P L +N +IK+F+ R++ ++F+ + E GV D F++ V KA LG +K+G ++
Sbjct: 87 PFL--WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQI 144
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
HG + + + D ++ N +M +Y G + ++LFD M +D VS+N I G+VK
Sbjct: 145 HGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMV 204
Query: 171 EDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG-N 228
+ A ++F ++MP ++ ++S S + E G + + +E+ ++ N
Sbjct: 205 KSARELF-------DVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWN 257
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+++D KCG + A LF++MP ++V+ W +MV GY G+++ AR LFD P RD++
Sbjct: 258 SMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVIS 317
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
AM+ GYVQ EA+ F +M + L PD L+ L+ AQLG ++G +H YI
Sbjct: 318 CNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYI 377
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+N ++ + ALI+MYAKCG I+ AL +F ++ +K W +II GLA++G A
Sbjct: 378 EDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAF 437
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
ELF +M KPDDITFIGVL+AC+H GLV EG F M V++++PKL+HYGC++D+
Sbjct: 438 ELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDI 497
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG ++EA++ + K+P E N+++ + LLSACR + N +GE +A L ++S +
Sbjct: 498 LGRAGHVEEAKKFVEKMPIEPNDVV---WRTLLSACRNHENFTIGEPVAKHLISVDSYNP 554
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
S + LL+NIYA W DV +R MK+ ++K+PGCS IE+ G +HEF V D SH +++
Sbjct: 555 SSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVR 614
Query: 588 EIYSMLDRMA 597
EIYSMLD ++
Sbjct: 615 EIYSMLDSLS 624
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/600 (36%), Positives = 345/600 (57%), Gaps = 42/600 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L Q + + GL + L+ L+ T +L Y +F + +P + +N ++++
Sbjct: 23 HLNQTTSILITSGLAHHTFFLSDLLRSATK----DLGYTLLLFDRLATPYIFLWNTIVRS 78
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
F+ + L+ +S+LR GV PD T+P + KA L + + + ++VK GL+FD
Sbjct: 79 FSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQFYAHIVKFGLDFD 137
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V NS++ + G + ++LF E KDVVSW I+G ++ R +A++ F MR
Sbjct: 138 AFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRS 197
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCL 240
+ DE TVVS L A L+++ G+ +H + + + + +G+AL+DMY KC
Sbjct: 198 S-GVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKC--- 253
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
G + A +F+ P R++V W A+I GYVQ N
Sbjct: 254 ----------------------------GYCDDAVKVFNEMPTRNLVSWGALIAGYVQCN 285
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
R+ EA+ +F+EM I ++P++ + + LT CAQLG+L+QG+W+H Y++ +++ +++ + T
Sbjct: 286 RYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGT 345
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL++MY+KCG +++AL +F +L KD WT++I GLAM G +L LFSQMI +P
Sbjct: 346 ALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQP 405
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
+ +TF+GVLSAC+HGGLVDEG F M Y+++P ++HYGC++DLLGRAG L+EA +
Sbjct: 406 NGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKF 465
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P E + +GAL S C I+ ++GE + L K++ S + LLAN+Y+
Sbjct: 466 IESMPMEPTPGV---WGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRC 522
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+WE NVR+ MK GV K P CS IE+NG+IHEF+ D SH E +Y ML + L
Sbjct: 523 QKWEAAANVRRLMKGKGVDKSPACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTAQL 582
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/527 (40%), Positives = 325/527 (61%), Gaps = 38/527 (7%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYG--VLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++VH ++TG D YV +++ Y + K+F+ +P+ +V +N+ I G +
Sbjct: 47 KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELE--- 221
+ A+ + +M + P++ T + ACTA + E G ++H + I Q L
Sbjct: 107 QNNEPCKAICCYYKMMIA-HARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDV 165
Query: 222 ------------FTPIMG----------------NALLDMYCKCGCLSEARELFDEMPNK 253
F + G NA++D Y KCG + A+ELF M +K
Sbjct: 166 HIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDK 225
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
NV W MVSG CG +E+AR+LF+ ++ + W+AMI+GY++ + EA+ +F MQ
Sbjct: 226 NVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQ 285
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
++P KF+L ++L CA LGAL+QG+WIH Y+N N + DAV+ TAL++MYAKCG ++
Sbjct: 286 REEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLD 345
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A ++F ++ +K+ +W ++ICGL M+G+ A+ELF +M +P+ IT +GVLSAC+
Sbjct: 346 MAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACA 405
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H G+VDEG R FN+M EVY I+P +EHYGC++DLLGRAGLL EAEE++ +P E + +
Sbjct: 406 HSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAV- 464
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+GALL ACR +G+V++GE++ +L ++E ++S + LL+NIYA A RW+DV NVR+ M
Sbjct: 465 --WGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLM 522
Query: 554 KEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
KE GV+ G S I+ +G++HEF +GD SH +MK IY ML M K L
Sbjct: 523 KERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRL 569
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 202/467 (43%), Gaps = 95/467 (20%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQ+ A + G Q+ L+ +P NL +A K+F + +P + +N++I
Sbjct: 43 LHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIII 102
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K + K++ + K+ P+ FTYP +FKA ++G +VH +V+K GL
Sbjct: 103 KGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLS 162
Query: 121 FDTYVCNSIMDMYGVLGK----------------IC---------------NVKKLFDEM 149
D ++ ++ + MYG G+ IC K+LF M
Sbjct: 163 GDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSM 222
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR---------------------------- 181
DK+V SWNV +SG KC E+A ++F M+
Sbjct: 223 EDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFN 282
Query: 182 --QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDMYCKCG 238
Q + P + + S L+AC L L+ G+ IH Y+N F ++G AL+DMY KCG
Sbjct: 283 VMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCG 342
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L A ++F++M K V W +M+ G G
Sbjct: 343 RLDMAWDVFEKMEKKEVFTWNAMICGLGMHG----------------------------- 373
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE-NRITVDAV 357
R ++A+ LF +MQ + +P+ L+ +L+ CA G +++G I + E I
Sbjct: 374 --RAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGME 431
Query: 358 VATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKI 403
++++ + GL+ +A E+ Y + E AA W +++ +G +
Sbjct: 432 HYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDV 478
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 347/574 (60%), Gaps = 14/574 (2%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMV-FCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +K++ AQ+ + + +P ++++++ + P +L A +F IQ P LL +N +
Sbjct: 27 LNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQ--SLPKAHFVFNQIQRPTLLVWNHM 84
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I +K ++ ++ + +G+ + T+ F+FK+ + +V++G+ V + +K G
Sbjct: 85 IHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGF 144
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E +V N+++ MY G++ +K+FD M ++DVVSWN I G+ + RF+ +D+FR
Sbjct: 145 ESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFRE 204
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCG 238
M Q N+ D T++ +SA L E+G + +YI++ + +GN L+DMY + G
Sbjct: 205 M-QAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRG 263
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A +F +M KN++ W +M+ GY G L A+ LF+ P RD++ WT+MI GY
Sbjct: 264 MIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSL 323
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ EAV LF+EM + +KPD+ + L+ CA LG+L+ G+ +H YI ++ I D V
Sbjct: 324 AKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFV 383
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+LI+MY KCG++EKAL++F +++ +D+ SWTSII GLA+NG AL +F QM+ G
Sbjct: 384 GNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGI 443
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P TF+GVL AC+H GLVD+G F +M Y++ P+++HYGC++DLL R+G LD A
Sbjct: 444 CPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAY 503
Query: 479 ELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
I+K+P IVP ++ LLSAC+++GN+ + E ++ L ++ ++ + L ++
Sbjct: 504 NFIKKMP------IVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSS 557
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
YA ++RW+DV +R+ M+ ++K SSIE+
Sbjct: 558 TYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 591
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 339/548 (61%), Gaps = 22/548 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L+ A ++F + ++++ +I A+A+ +++L F ++++ G+ P++FT+ +
Sbjct: 114 GSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASIL 173
Query: 96 KA---VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
A + LGE H +VK G E + +V N ++DMY G I ++LFD+MP +
Sbjct: 174 PACTDLEVLGEF------HDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQR 227
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN-LELGKE 211
DVVSWN I+G+V+ EDA+ +F+ + + + + T+++ + C ++N +EL ++
Sbjct: 228 DVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWN--TMMAGYAQCGDVENAVELFEK 285
Query: 212 IHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
+ E + N ++ Y + G + EA +LF MP +NVI W +++SG+ GQ+
Sbjct: 286 MP-------EQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQV 338
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
E+A LF P ++V W AMI GY Q + + A+ LF +MQ++ +KP+ +L C
Sbjct: 339 EEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPAC 398
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
A L LEQG H + + D +V L+ MYAKCG IE A ++F +R++D+AS +
Sbjct: 399 AALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLS 458
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
++I G A+NG ++LELF QM G KPD +TF+GVLSAC H GLVDEGR++F+ MT
Sbjct: 459 AMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRF 518
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
Y I P +EHYGC+IDLLGRAG DEA +LI K+P + + ++G+LLSACR + N+D+
Sbjct: 519 YHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPD---ADMWGSLLSACRTHNNIDL 575
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
GEK+A L + ++ + + LL+NIYA+A RW+D+ +VR +MK+ V+K GCS I I
Sbjct: 576 GEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKK 635
Query: 572 IIHEFLVG 579
+H FLVG
Sbjct: 636 QVHAFLVG 643
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 229/435 (52%), Gaps = 19/435 (4%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
L+K+ K+G R++L + + E G+ P + TY + + + + +H ++++T
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 119 LEF-DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
E D + N ++ +Y LG + +++FDEMP K+VVSW I+ + + ++A+ F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCK 236
M Q + P+ T S L ACT +LE+ E H + E +GN L+DMY K
Sbjct: 155 YEM-QDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAK 210
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
GC+ ARELFD+MP ++V+ W +M++GYV G +E A LF P RD++ W M+ GY
Sbjct: 211 RGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGY 270
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILV--ALLTGCAQLGALEQGKWIHGYINENRITV 354
Q + AV LF +M P++ ++ ++ G Q G++++ + + E +
Sbjct: 271 AQCGDVENAVELFEKM------PEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNV-- 322
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
+ A+I +A+ G +E+AL++F + E + SW ++I G + NG+ AL+LF QM
Sbjct: 323 --ISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQ 380
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
KP+ TF VL AC+ ++++G + Q + L+ + + G +
Sbjct: 381 MVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIR-SGFQSDVLVGNTLVGMYAKCGSI 439
Query: 475 DEAEELIRKIPNENN 489
++A ++ ++ +++
Sbjct: 440 EDARKVFDRMRQQDS 454
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 182/411 (44%), Gaps = 61/411 (14%)
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPI-M 226
R +A+ + + M + + P T S L C K+L K +H + I + E I +
Sbjct: 44 RLREALHILQDMVEN-GIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISL 102
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
GN L VS YV G L +AR +FD PV+++
Sbjct: 103 GNKL-------------------------------VSIYVKLGSLVEARRVFDEMPVKNV 131
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V WTAMI Y + EA+ F EMQ + ++P+ F ++L C L L + H
Sbjct: 132 VSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDE 188
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I + + V L++MYAK G IE A E+F ++ ++D SW ++I G NG I A
Sbjct: 189 IVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDA 248
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L+LF ++ K D IT+ +++ + G V+ F M E L + +I
Sbjct: 249 LKLFQEI----PKRDVITWNTMMAGYAQCGDVENAVELFEKMPE-----QNLVSWNTMIA 299
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
+ G + EA +L + +P N V + A++S G V+ KL + E
Sbjct: 300 GYVQNGSVKEAFKLFQIMPERN----VISWNAVISGFAQNGQVEEALKLFKTMP--ECNV 353
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK--------VPGCSSIEI 569
S++ ++A Y+ + E+ + +M+ + ++ +P C+++ +
Sbjct: 354 VSWNAMIAG-YSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAV 403
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 160/316 (50%), Gaps = 11/316 (3%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++FQI ++N + N V +G + A K+F ++ ++++N +I +++ G
Sbjct: 312 KLFQIMPERNVISWNA--VISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQA 369
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+L LF +++ + P+ T+ V A L +++G + H V+++G + D V N++
Sbjct: 370 ENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTL 429
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+ MY G I + +K+FD M +D S + I G+ ++++++F +M Q L PD
Sbjct: 430 VGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQM-QFTGLKPD 488
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELF 247
T V LSAC ++ G++ + + TP M + ++D+ + GC EA +L
Sbjct: 489 RVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLI 548
Query: 248 DEMPNK-NVICWTSMVSG---YVNCGQLEK-ARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
++MP K + W S++S + N EK A+ L +P ++ + + N Y R+
Sbjct: 549 NKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNP-QNPAPYVLLSNIYAAAGRW 607
Query: 303 DEAVALFREMQIIRLK 318
D+ ++ M+ ++K
Sbjct: 608 DDIGSVRNRMKDRKVK 623
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/586 (37%), Positives = 338/586 (57%), Gaps = 9/586 (1%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS-IQSPCLLAYNLLIKAFAKKGSFRKSL 73
GL + ++L+ FC L +A + + P +++ F + G +L
Sbjct: 58 GLAAHRFPASRLLAFCALSDPPRLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHAL 117
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDM 132
LF ++ + D T F KA E +H K G + V N+++ M
Sbjct: 118 ALFRRVLRDRLPADARTIVFAVKAA--TTSSSPAEAIHCVAFKRGFIGQSVLVGNALVHM 175
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y + + +KLFDEM D+DVVSW + G+ + ++A VF RM P+E T
Sbjct: 176 YASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVT 235
Query: 193 VVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
+V+ SA + L LG+ +H+ + + + + NAL+DM+ KCGC++ A+E+FD MP
Sbjct: 236 LVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMP 295
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
K+V WTSMVS Y CG LE A LF P R+ V W+ M+ Y Q N +EA+ +F +
Sbjct: 296 IKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFND 355
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIH-GYINENRITVDAVVATALIEMYAKCG 370
M ++P LV++L+ CAQLG L+ G+ ++ YI +++ + ++ A I+M+AKCG
Sbjct: 356 MIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCG 415
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
+ A +F + +K+ SW ++I A++G+ +AL LF + + G PD+IT+IGVLS
Sbjct: 416 DVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLS 475
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
ACSH GLV EGR F M VY I+P+ EHY C+IDLLG+ GLL+EA E+ R +P +E
Sbjct: 476 ACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADE 535
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+GALL+ACR++GNV++G+ A L ++ DS + L++ IYAS ++W V +R
Sbjct: 536 ---AGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIR 592
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
M++ GV+K PGCSSIE++G HEFL D SH+ ++IY+ L+ +
Sbjct: 593 TVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAALENI 638
>gi|225444117|ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 553
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/521 (40%), Positives = 324/521 (62%), Gaps = 17/521 (3%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
+N LI+AF++ + ++L+++ ++ R V PD +TYP + KA +G + KG++VH +V
Sbjct: 41 WNCLIRAFSRSPTPITAILIYNHFIKGRFVFPDKYTYPAMLKACWRMGSLSKGKEVHAHV 100
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
KTGL+ D YV N+++ +YG G++ + ++LFD MP +D+ SWN + + ++AV
Sbjct: 101 TKTGLDSDVYVGNALLHLYGSTGQVTDARRLFDGMPHRDLASWNTLLGAY-----NDNAV 155
Query: 175 DVF----RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNA 229
+V R M +G D ++V SAC + E GKE+H Y I + + NA
Sbjct: 156 EVLVLFKRMMYEGIG--GDHISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRPALSLSNA 213
Query: 230 LLDMYCKCGCLSEARELFDEMPN-KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
LL +Y KCG + A+ LF EM ++V+ T + +GYV+ G ++ AR +FD+ V+D+V
Sbjct: 214 LLGVYTKCGEMDAAQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLVS 273
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W +MI+ YV+ +A+ LFR+M+ ++PD+ +V++L CA L L+ G+ H +I
Sbjct: 274 WNSMIHAYVKAKHPKKAIELFRKMENEMVEPDETTMVSVLAACASLADLQNGRLAHRFII 333
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+N D V TALI+MYAKCG +E+A+ FY++ +D +WT+ I GLA +G +KAL
Sbjct: 334 QNNPRQDLFVGTALIDMYAKCGSLEEAMVTFYKMDSRDVFTWTTAIEGLANHGHGDKALS 393
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF++M G KP+ TF+ VL ACS GLV EG F M E YQIQPK+EH GCL+D+L
Sbjct: 394 LFTEMEKQGIKPNQATFVSVLMACSRSGLVKEGCLLFKRMVEAYQIQPKIEHLGCLLDIL 453
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
RAGLL +AEE I+ +P + I LLSAC + D+GEK+A L ++ S+ +
Sbjct: 454 SRAGLLHQAEEFIKLMPPKEKIIA---NKTLLSACMNHLEYDLGEKIANGLTELSSQSHA 510
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
H LL+N YA A +W +V R+ MKE+ +RKVPG SS++I
Sbjct: 511 THILLSNFYALAGQWAEVAKTRRVMKEIDIRKVPGISSVDI 551
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 162/380 (42%), Gaps = 85/380 (22%)
Query: 144 KLFDEMPDKDVVS--------WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
K+FD++ + + + WN I + A+ ++ +G + PD+ T +
Sbjct: 20 KVFDQVLTQTITTAFIHATPTWNCLIRAFSRSPTPITAILIYNHFIKGRFVFPDKYTYPA 79
Query: 196 TLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L AC + +L GKE+H ++ + L+ +GNALL +Y G +++AR LFD MP+++
Sbjct: 80 MLKACWRMGSLSKGKEVHAHVTKTGLDSDVYVGNALLHLYGSTGQVTDARRLFDGMPHRD 139
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
+ W +++ Y + E + LF+ M
Sbjct: 140 LASWNTLLGAYNDNAV---------------------------------EVLVLFKRMMY 166
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ D +V + + C ++G E GK +HGY+ + I ++ AL+ +Y KCG ++
Sbjct: 167 EGIGGDHISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRPALSLSNALLGVYTKCGEMDA 226
Query: 375 ALEIFYELRE--------------------------------KDAASWTSIICGLAMNGK 402
A +F E+ KD SW S+I
Sbjct: 227 AQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLVSWNSMIHAYVKAKH 286
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR---RFFNTMTEVYQIQPKLE 459
KA+ELF +M + +PD+ T + VL+AC+ + GR RF + Q P+ +
Sbjct: 287 PKKAIELFRKMENEMVEPDETTMVSVLAACASLADLQNGRLAHRF------IIQNNPRQD 340
Query: 460 HY--GCLIDLLGRAGLLDEA 477
+ LID+ + G L+EA
Sbjct: 341 LFVGTALIDMYAKCGSLEEA 360
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 6/263 (2%)
Query: 9 AQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGS 68
AQ + + + ++ ++F + G++ A IF + L+++N +I A+ K
Sbjct: 227 AQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLVSWNSMIHAYVKAKH 286
Query: 69 FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
+K++ LF K+ V PD T V A L +++ G H ++++ D +V +
Sbjct: 287 PKKAIELFRKMENEMVEPDETTMVSVLAACASLADLQNGRLAHRFIIQNNPRQDLFVGTA 346
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLM 187
++DMY G + F +M +DV +W +I G + A+ +F M +QG +
Sbjct: 347 LIDMYAKCGSLEEAMVTFYKMDSRDVFTWTTAIEGLANHGHGDKALSLFTEMEKQG--IK 404
Query: 188 PDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARE 245
P++ T VS L AC+ ++ G + + + + + P + + LLD+ + G L +A E
Sbjct: 405 PNQATFVSVLMACSRSGLVKEGCLLFKRMVEAYQIQPKIEHLGCLLDILSRAGLLHQAEE 464
Query: 246 LFDEMPNK-NVICWTSMVSGYVN 267
MP K +I +++S +N
Sbjct: 465 FIKLMPPKEKIIANKTLLSACMN 487
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/583 (37%), Positives = 335/583 (57%), Gaps = 9/583 (1%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS-IQSPCLLAYNLLIKAFAKKGSFRKSL 73
GL N ++L+ FC L +A + + P +++ F + G +L
Sbjct: 58 GLASNRFPASRLLAFCALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHAL 117
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC-NSIMDM 132
LF ++ ++ D T F KA E +H K G + + N+++ M
Sbjct: 118 TLFRRVLRDRLAVDARTIVFAVKAAA--TSSSPTEAIHCVAFKRGFIGQSVLAGNALVHM 175
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y + + +KLFDEM D+DVVSW I G+ + ++A VF RM ++ P+E T
Sbjct: 176 YTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVT 235
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMP 251
+V+ SA + L LG+ +H+ I + + + NAL+DM+ KCGC++ A+E+FD MP
Sbjct: 236 LVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMP 295
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
K+V WTSMVS Y CG LE A LF P R++V W+ M+ Y N DEA+ +F +
Sbjct: 296 IKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFND 355
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCG 370
M ++P LV++L+ CAQL +L+ G W++ YI +++ + ++ A I+M+AKCG
Sbjct: 356 MIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCG 415
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
+ A +F + +K+ SW ++I ++G+ +AL LF + G PD+ T+IGVLS
Sbjct: 416 DVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLS 475
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
ACSHGGLV EGR F M VY I+P+ EHY C+IDLLG+ GLL EA E+ R +P +E
Sbjct: 476 ACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADE 535
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+GALL+ACR++GNV++G+ A L ++ DS + L++ IYAS ++W V +R
Sbjct: 536 A---GWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLR 592
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
M++ V+K PGCSSIE++G HEFLV D SH ++IY+ L
Sbjct: 593 TVMRDRRVKKNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAAL 635
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 329/557 (59%), Gaps = 58/557 (10%)
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
R +L ++ +R+ + D+F P V KA + + G+++HG+ VK GL D +V N++
Sbjct: 91 RYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNAL 150
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI----------------------SGHVKC 167
M MY G + + + LFD+M ++DVVSW+ I +G+++C
Sbjct: 151 MQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRC 210
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIM 226
E+ +F RM + N+ P++ T++S + +C + ++LGK +H YI + +
Sbjct: 211 NDLEEGERLFVRMIEE-NVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLAL 269
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
AL+DMY KC G++ AR +FD +D+
Sbjct: 270 ATALVDMYGKC-------------------------------GEIRSARAIFDSMKNKDV 298
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
+ WTAMI+ Y Q N D A LF +M+ ++P++ +V+LL+ CA GAL+ GKW H Y
Sbjct: 299 MTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAY 358
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I++ + VD ++ TALI+MYAKCG I A +F E ++D +W ++ G M+G KA
Sbjct: 359 IDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKA 418
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L+LF++M + G KP+DITFIG L ACSH GLV EG+ F M + + PK+EHYGC++D
Sbjct: 419 LKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVD 478
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LLGRAGLLDEA ++I +P N + ++GA+L+AC+I+ N +MGE A L +E ++
Sbjct: 479 LLGRAGLLDEAYKMIESMPVTPN---IAIWGAMLAACKIHKNSNMGELAARELLALEPQN 535
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
+ L++NIYA+ANRW DV +R+ +K+ G++K PG SSIE+NG++H+F +GD +H +
Sbjct: 536 CGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLI 595
Query: 587 KEIYSMLDRMAKTLLDS 603
++I ML M+K L ++
Sbjct: 596 EKISEMLAEMSKKLKEA 612
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 177/364 (48%), Gaps = 35/364 (9%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F ++++ +I + + + LF ++ E V P++ T + + G++G
Sbjct: 188 LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGA 247
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
V+ G+++H Y+++ G + +++DMYG G+I + + +FD M +KDV++W IS
Sbjct: 248 VQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISA 307
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEF 222
+ + + A +F +MR + P+E T+VS LS C L++GK H YI+ Q +E
Sbjct: 308 YAQANCIDYAFQLFVQMRDN-GVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEV 366
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
I+ AL+DMY KCG +S A+ LF E ++++ W M++GY G EK
Sbjct: 367 DVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEK--------- 417
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
A+ LF EM+ + +KP+ + L C+ G + +GK
Sbjct: 418 ----------------------ALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKG 455
Query: 343 I-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMN 400
+ I++ + ++++ + GL+++A ++ + + A W +++ ++
Sbjct: 456 LFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
Query: 401 GKIN 404
N
Sbjct: 516 KNSN 519
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 142/293 (48%), Gaps = 11/293 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A IF S+++ ++ + +I A+A+ + LF ++R+ GV P+ T +
Sbjct: 281 GEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLL 340
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
G + G+ H Y+ K G+E D + +++DMY G I ++LF E D+D+
Sbjct: 341 SLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDIC 400
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WNV ++G+ E A+ +F M + + P++ T + L AC+ + GK +
Sbjct: 401 TWNVMMAGYGMHGYGEKALKLFTEM-ETLGVKPNDITFIGALHACSHAGLVVEGKGLFEK 459
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG-----YVN 267
+ + P + + ++D+ + G L EA ++ + MP N+ W +M++ N
Sbjct: 460 MIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSN 519
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
G+L AR+L P ++ M N Y NR+++ + + ++ +K +
Sbjct: 520 MGEL-AARELLALEP-QNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKE 570
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/625 (36%), Positives = 355/625 (56%), Gaps = 45/625 (7%)
Query: 1 MTQLKQIQAQIF-QIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ LK I A++ + + + +NKL+ + G YA K+F I P + L
Sbjct: 15 LKSLKSIHARLLIESSVASSEFVINKLLRL--YSRFGATDYAHKVFDEITQPNAYLWTSL 72
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I + + + ++ LF ++R +S NFT V KA+ L K G+ V+G+V+K G
Sbjct: 73 IHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGF 132
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
FD V NS++D++ K+ ++ FDEM +KD+VSWN+ ISG+ D VD+ R+
Sbjct: 133 AFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGN----NDRVDIARK 188
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGK------------------------EIHRY 215
+ MP+ V T C +K ++ + +I
Sbjct: 189 F---FDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDC 245
Query: 216 INQELEF--TPIMG----NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+N + F PI N ++ +CK G L A++ FD MPNKNVI W M+ GY+ G
Sbjct: 246 VNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNG 305
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
AR LFD+ P++++V W+ MI GY + + +A+ LF + +KPD+ ++ +++
Sbjct: 306 DTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIIS 365
Query: 330 GCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
C+QLG ++ + IH Y+ + ++ D V T+LI+MYAKCG IEKAL++F KD
Sbjct: 366 ACSQLGIIDAAESIIHNYVGPSLLS-DLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLL 424
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
++++I LA +G A+ LF +M KPD +TF+GVL+AC+HGGLVDEGR++F M
Sbjct: 425 CYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQM 484
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
TE + IQP +HY C++DLLGR G L+EA LIR +P + ++ +GALL+ACR++ N
Sbjct: 485 TEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVV---WGALLAACRVHCN 541
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
V + E AA L KIE +S + LL+NIYA+A RW V VR K++E VRK G S IE
Sbjct: 542 VQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIE 601
Query: 569 INGIIHEFLVGDPSHSEMKEIYSML 593
++ ++HEF++GD SH++ I +L
Sbjct: 602 LSHVVHEFVMGDMSHTDSDSISLIL 626
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 359/642 (55%), Gaps = 51/642 (7%)
Query: 3 QLKQIQAQIFQIG-LQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNL 58
Q ++ A++ G L +P + L+ V C P +L YA +F + P ++
Sbjct: 14 QAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRM-PPSTFLFDT 72
Query: 59 LIKAFAKKGS-FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK---GEKVHGYV 114
++A ++ GS + LLF ++R GV PD FT+ F+FK +H
Sbjct: 73 ALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAAC 132
Query: 115 VKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEM------------------------ 149
++T L +V NS++ MY LG + ++ FDE+
Sbjct: 133 LRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDT 192
Query: 150 -------PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
P +DV+SW I+ + + R +AV F+ M + PDE TV++ LSAC
Sbjct: 193 QLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSH-GIAPDEVTVIAVLSACAK 251
Query: 203 LKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEM---PNKNVICW 258
LK+LELG+ +H + ++ + + + AL+DMY KCG A+++FD + P W
Sbjct: 252 LKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQ--SW 309
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
+++ GY G ++ AR LFD VRDI+ + +M+ GY+ + EA+ LF M+ L+
Sbjct: 310 NAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLR 369
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
D F +V LLT CA LGAL+QG+ +H I + + D + TAL++MY KCG +++A +
Sbjct: 370 VDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIV 429
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
F + ++D +WT++I GLA NG ALE F QM G +P+ +++I VL+ACSH L+
Sbjct: 430 FQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLL 489
Query: 439 DEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
+EGR +F+ M +Y I P++EHYGC+IDLLGR+GLLDEA +L++ +P + N +I + +
Sbjct: 490 NEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVI---WAS 546
Query: 499 LLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+LSACR++ ++D+ + A L K+E + + L NIY + +WE+ + +R M+E V
Sbjct: 547 ILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQV 606
Query: 559 RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+K G SSI + G +H+F+V D SH + EI +ML+ ++ L
Sbjct: 607 KKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRL 648
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 359/642 (55%), Gaps = 51/642 (7%)
Query: 3 QLKQIQAQIFQIG-LQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNL 58
Q ++ A++ G L +P + L+ V C P +L YA +F + P ++
Sbjct: 14 QAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRM-PPSTFLFDT 72
Query: 59 LIKAFAKKGS-FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK---GEKVHGYV 114
++A ++ GS + LLF ++R GV PD FT+ F+FK +H
Sbjct: 73 ALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAAC 132
Query: 115 VKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEM------------------------ 149
++T L +V NS++ MY LG + ++ FDE+
Sbjct: 133 LRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDT 192
Query: 150 -------PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
P +DV+SW I+ + + R +AV F+ M + PDE TV++ LSAC
Sbjct: 193 QLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSH-GIAPDEVTVIAVLSACAK 251
Query: 203 LKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEM---PNKNVICW 258
LK+LELG+ +H + ++ + + + AL+DMY KCG A+++FD + P W
Sbjct: 252 LKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQ--SW 309
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
+++ GY G ++ AR LFD VRDI+ + +M+ GY+ + EA+ LF M+ L+
Sbjct: 310 NAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLR 369
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
D F +V LLT CA LGAL+QG+ +H I + + D + TAL++MY KCG +++A +
Sbjct: 370 VDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIV 429
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
F + ++D +WT++I GLA NG ALE F QM G +P+ +++I VL+ACSH L+
Sbjct: 430 FQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLL 489
Query: 439 DEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
+EGR +F+ M +Y I P++EHYGC+IDLLGR+GLLDEA +L++ +P + N +I + +
Sbjct: 490 NEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVI---WAS 546
Query: 499 LLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+LSACR++ ++D+ + A L K+E + + L NIY + +WE+ + +R M+E V
Sbjct: 547 ILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQV 606
Query: 559 RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+K G SSI + G +H+F+V D SH + EI +ML+ ++ L
Sbjct: 607 KKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRL 648
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/583 (37%), Positives = 335/583 (57%), Gaps = 9/583 (1%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS-IQSPCLLAYNLLIKAFAKKGSFRKSL 73
GL N ++L+ FC L +A + + P +++ F + G +L
Sbjct: 58 GLASNRFPASRLLAFCALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHAL 117
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC-NSIMDM 132
LF ++ ++ D T F KA E +H K G + + N+++ M
Sbjct: 118 TLFRRVLRDRLAVDARTIVFAVKAAA--TSSSPTEAIHCVAFKRGFIGQSVLAGNALVHM 175
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y + + +KLFDEM D+DVVSW I G+ + ++A VF RM ++ P+E T
Sbjct: 176 YTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVT 235
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMP 251
+V+ SA + L LG+ +H+ I + + + NAL+DM+ KCGC++ A+E+FD MP
Sbjct: 236 LVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMP 295
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
K+V WTSMVS Y CG LE A LF P R++V W+ M+ Y N DEA+ +F +
Sbjct: 296 IKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFND 355
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCG 370
M ++P LV++L+ CAQL +L+ G W++ YI +++ + ++ A I+M+AKCG
Sbjct: 356 MIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCG 415
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
+ A +F + +K+ SW ++I ++G+ +AL LF + G PD+ T+IGVLS
Sbjct: 416 DVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLS 475
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
ACSHGGLV EGR F M VY I+P+ EHY C+IDLLG+ GLL EA E+ R +P +E
Sbjct: 476 ACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADE 535
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+GALL+ACR++GNV++G+ A L ++ DS + L++ IYAS ++W V +R
Sbjct: 536 A---GWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLR 592
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
M++ V+K PGCSSIE++G HEFLV D SH ++IY+ L
Sbjct: 593 TVMRDRRVKKNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAAL 635
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/640 (35%), Positives = 354/640 (55%), Gaps = 46/640 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHG-NLLYAEKIFGSIQSPCLL---A 55
Q ++ A + G +P + + L+ V C PS +L YA +F + + L A
Sbjct: 14 QAAELHAHLTTSGRLLHPPSAHHLLNSLVNCLPPSDPLHLRYALHLFDRMPASTFLFDTA 73
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK-AVGWLGEVKKGEKVHGYV 114
+A G +LF ++R V PD FT+ F+FK + +H
Sbjct: 74 LRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAAC 133
Query: 115 VKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG---------- 163
++T L +V NS++ MY LG +V++ FDE+P KD VSW + ISG
Sbjct: 134 LRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDA 193
Query: 164 ---------------------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
+ + R ++AVD F+ M + PD+ TV+ LSAC+
Sbjct: 194 RLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSE-GIAPDDVTVIGVLSACSQ 252
Query: 203 LKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTS 260
LK+LELG +H + ++ + + + AL+DMY KCG ARE+FD + + W +
Sbjct: 253 LKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNA 312
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
++ GY G ++ AR LFD+ VRDI+ + +MI GY+ + EA+ LF M+ L+ D
Sbjct: 313 IIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVD 372
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
F +V+LL+ CA LGAL QG+ +H I + D + TAL++MY KCG + +A +F
Sbjct: 373 NFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQ 432
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
+ ++D +WT++I GLA NG LE F QM G +P+ +++I VL+ACSH L++E
Sbjct: 433 RMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNE 492
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
GR +F+ M +Y I P++EHYGC+IDLLGR+GLLDEA +L++ +P + N +I + ++L
Sbjct: 493 GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVI---WASIL 549
Query: 501 SACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
SACR++ +D+ + A L KIE + + + L NI + +WED + +R M+E V+K
Sbjct: 550 SACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKK 609
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
G SS+ + G +H+F+V D SH + EI +ML+ ++ L
Sbjct: 610 TAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRL 649
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/565 (23%), Positives = 263/565 (46%), Gaps = 55/565 (9%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTH--PSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
Q+ ++ +GL NP + L+ H H +L ++ + C N++++
Sbjct: 814 QLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMC----NVVLRGL 869
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTG-LEF 121
+ + F +R + + + +Y + K GE +++G ++HG V+K G +
Sbjct: 870 GNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPS 929
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ ++ NS++D+Y +G + K +++ +DV+SWN +S + ++AV ++M
Sbjct: 930 NIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQML 989
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI---MGNALLDMYCKCG 238
MP + VS L+ + +LG +IH +++ L F+ + L+DMY KC
Sbjct: 990 WH-GKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHK-LGFSCSSVHVQTTLIDMYGKCC 1047
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
C + +F+E+P+ + C S+++ + C
Sbjct: 1048 CFDHSLAIFNEIPSIALECCNSLITSSLRC------------------------------ 1077
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA--LEQGKWIHGYINENRITVDA 356
N FD A+ + M + + PD A + + + L + +H + + +D
Sbjct: 1078 -NMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDM 1136
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V ++LI YA G + + IF L + + +T+II A G +A+ELF QM+S
Sbjct: 1137 AVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSS 1196
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G KPD++TF+ ++ C G+ +EGR M ++ P H+ C+++LL R G + E
Sbjct: 1197 GLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKE 1256
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A E++ + P + + +LL +C+ +G +G++ A +L + KD + ++N
Sbjct: 1257 AMEMMEQSPLRH---YTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNF 1313
Query: 537 Y------ASANRWEDVTNVRQKMKE 555
+ +A R +++TNV++ K
Sbjct: 1314 FNDIGDRETALRIKEMTNVKEVKKS 1338
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 120/562 (21%), Positives = 219/562 (38%), Gaps = 104/562 (18%)
Query: 4 LKQIQAQIFQI-----GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLL---- 54
+K ++ IF+ G Q+ P+ + +VF PS + + S +P L
Sbjct: 699 IKNLRPTIFRPLGADDGKQKQPD---RRVVFLLPPSRRDAPVLVRPIPSSPAPFSLRSSV 755
Query: 55 --------AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
+ N +I F + G ++ ++ + G+ P F + + +
Sbjct: 756 TMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIR----ETPHTFSTILGVCSTYE 811
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
++HG V+ GL + +V +++++ Y + LF E+P ++ NV + G
Sbjct: 812 ALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGN 871
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN-------LELGKEIHRYINQE 219
E+ + F MR+ + ++ LS C A+K LE G+++H + +
Sbjct: 872 LKLTEELICCFLDMRR-------QYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKA 924
Query: 220 --LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ + N+L+D+Y G + + +++ +++VI W S+
Sbjct: 925 GWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSI---------------- 968
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
++ Y EAV ++M P V+LL + G
Sbjct: 969 ---------------LSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDW 1013
Query: 338 EQGKWIHGYINENRITVDAV-VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G IHG +++ + +V V T LI+MY KC + +L IF E+ S+I
Sbjct: 1014 QLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITS 1073
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS-------------HGGLVDEGRR 443
+ ALE+ MI G PDD+TF + A S H LV G
Sbjct: 1074 SLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLG-- 1131
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
F M + + Y C AG L + + + + N V + A++SAC
Sbjct: 1132 FEMDMAVCSSL---ITAYAC-------AGQLSSSHLIFEGLLDPN----VICFTAIISAC 1177
Query: 504 RIYGNVDMGEKLAALLEKIESK 525
YG+ G + L +++ S
Sbjct: 1178 ARYGD---GARAMELFDQMVSS 1196
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/601 (36%), Positives = 341/601 (56%), Gaps = 38/601 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q +++ A I + G+Q N N L+ + G+L A ++F I+ ++++ +I
Sbjct: 112 LEQGREVHAAILKSGIQPNRYLENTLLSM--YAKCGSLTDARRVFDGIRDRNIVSWTAMI 169
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AF ++ + ++ G PD T+ + A ++ G+KVH + K GLE
Sbjct: 170 EAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLE 229
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ V S++ MY G I + +FD++P+K+VV+W + I+G+ + + + A+++ +M
Sbjct: 230 LEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKM 289
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGC 239
+Q + P++ T S L CT LE GK++HRYI Q I + NAL+ MYCKC
Sbjct: 290 QQA-EVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKC-- 346
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
G L++AR LF P RD+V WTAM+ GY Q
Sbjct: 347 -----------------------------GGLKEARKLFGDLPHRDVVTWTAMVTGYAQL 377
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
DEA+ LFR MQ +KPDK + LT C+ L++GK IH + ++D +
Sbjct: 378 GFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ 437
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+AL+ MYAKCG ++ A +F ++ E++ +WT++I G A +G+ +ALE F QM G K
Sbjct: 438 SALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIK 497
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD +TF VLSAC+H GLV+EGR+ F +M Y I+P +EHY C +DLLGRAG L+EAE
Sbjct: 498 PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAEN 557
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+I +P + + +GALLSACRI+ +V+ GE+ A + K++ D + L+NIYA+
Sbjct: 558 VILTMPFQPGPSV---WGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAA 614
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
A R+ED VRQ M++ V K PG S IE++G +H F V D SH E KEIY+ L ++ +
Sbjct: 615 AGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQ 674
Query: 600 L 600
+
Sbjct: 675 I 675
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 233/452 (51%), Gaps = 42/452 (9%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ K+G +++L + + + +G + + + + L +++G +VH ++K+G+
Sbjct: 68 VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ + Y+ N+++ MY G + + +++FD + D+++VSW I V + +A +
Sbjct: 128 QPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYET 187
Query: 180 MR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKC 237
M+ GC PD+ T VS L+A T + L++G+++H I + LE P +G +L+ MY K
Sbjct: 188 MKLAGCK--PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAK- 244
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
CG + KA+ +FD+ P +++V WT +I GY
Sbjct: 245 ------------------------------CGDISKAQVIFDKLPEKNVVTWTLLIAGYA 274
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q + D A+ L +MQ + P+K ++L GC ALE GK +H YI ++ +
Sbjct: 275 QQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIW 334
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V ALI MY KCG +++A ++F +L +D +WT+++ G A G ++A++LF +M G
Sbjct: 335 VVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG 394
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDE 476
KPD +TF L++CS + EG+ + Y + L+ L+ + + G +D+
Sbjct: 395 IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDD 452
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
A R + N+ +E V + A+++ C +G
Sbjct: 453 A----RLVFNQMSERNVVAWTAMITGCAQHGR 480
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/598 (36%), Positives = 328/598 (54%), Gaps = 45/598 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L+++QAQI G Q N V + + +A +F P + +N + + +
Sbjct: 41 LQKVQAQIITHGFQYNGYVAPN--VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGY 98
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+R+ + LF K++ V P+ FT+P V K+ +G +GE++H V+K GLE +
Sbjct: 99 FHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQ 158
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V +++D+Y I + KLF M ++++V+W ISG++ C R A +F
Sbjct: 159 FVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLF------ 212
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+L P+ V + N ++ Y + G + A
Sbjct: 213 -DLAPERDVV--------------------------------LWNIMVSGYIEIGDMKAA 239
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R+LFD MP ++ + W +M++GY N G +E LF+ P R++ W +I GY F
Sbjct: 240 RKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFF 299
Query: 304 EAVALFREMQIIRLK-PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
E + F+ M I L P+ LV +L+ CA+LGAL+ GKW+H Y V AL
Sbjct: 300 EVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNAL 359
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MY+KCGLIE A+E+F + KD +W S+ICGLA +G AL LF QM G KPD
Sbjct: 360 IDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDG 419
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITFIGVL +C+H GLV+EG +FN+M Y I P++EHYGC++DL GRAGLLD A E ++
Sbjct: 420 ITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVK 479
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P E + +I + ALL ACRIY N+D+ E L +E K+ + + LL+NIY R
Sbjct: 480 RMPMEADAVI---WAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGR 536
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W+DV ++ M++ G +K+PGCS IE+N + EF D HS+ KEIY +L + K L
Sbjct: 537 WKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLL 594
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/609 (36%), Positives = 332/609 (54%), Gaps = 47/609 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L+++QAQI G Q N V + + +A +F P + +N + + +
Sbjct: 83 LQKVQAQIITHGFQYNGYVAPN--VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGY 140
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+R+ + LF K++ V P+ FT+P V K+ +G +GE++H V+K GLE +
Sbjct: 141 FHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQ 200
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V +++D+Y I + KLF M ++++V+W ISG++ C R A +F
Sbjct: 201 FVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLF------ 254
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+L P+ V + N ++ Y + G + A
Sbjct: 255 -DLAPERDVV--------------------------------LWNIMVSGYIEIGDMKAA 281
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R+LFD MP ++ + W +M++GY N G +E LF+ P R++ W +I GY F
Sbjct: 282 RKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFF 341
Query: 304 EAVALFREMQIIRLK-PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
E + F+ M I L P+ LV +L+ CA+LGAL+ GKW+H Y V AL
Sbjct: 342 EVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNAL 401
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MY+KCGLIE A+E+F + KD +W S+ICGLA +G AL LF QM G KPD
Sbjct: 402 IDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDG 461
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITFIGVL +C+H GLV+EG +FN+M Y I P++EHYGC++DL GRAGLLD A E ++
Sbjct: 462 ITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVK 521
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P E + +I + ALL ACRIY N+D+ E L +E K+ + + LL+NIY R
Sbjct: 522 RMPMEADAVI---WAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGR 578
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL-- 600
W+DV ++ M++ G +K+PGCS IE+N + EF D HS+ KEIY +L + K L
Sbjct: 579 WKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRS 638
Query: 601 LDSKQNAME 609
+ N ME
Sbjct: 639 FGYEPNMME 647
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/610 (37%), Positives = 342/610 (56%), Gaps = 56/610 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFC-THPS--HGNLLYAEKIFGSIQS-PCLLAY 56
+ KQI A + L N + K F H + H + ++ S+ S PC
Sbjct: 22 LRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDWSLSSFPC---- 77
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
NLLI +A ++L++ G PD +T+P V K+ + + + H VK
Sbjct: 78 NLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSVSVK 137
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
TGL D YV N+++ +Y + G K+F++M +DVVSW ISG+VK F +A+ +
Sbjct: 138 TGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISL 197
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-----NQELEFTPIMGNALL 231
F RM N+ P+ GT VS L AC L L LGK IH + +EL ++ NA+L
Sbjct: 198 FLRM----NVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEEL----VVCNAVL 249
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
DMY KC +++A R +FD P +DI+ WT+
Sbjct: 250 DMYMKCDSVTDA-------------------------------RKMFDEMPEKDIISWTS 278
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI G VQ E++ LF +MQ +PD IL ++L+ CA LG L+ G+W+H YI+ +R
Sbjct: 279 MIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHR 338
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
I D + T L++MYAKCG I+ A IF + K+ +W + I GLA+NG +AL+ F
Sbjct: 339 IKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFE 398
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE-VYQIQPKLEHYGCLIDLLGR 470
++ G +P+++TF+ V +AC H GLVDEGR++FN MT +Y + P LEHYGC++DLL R
Sbjct: 399 DLVESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCR 458
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
AGL+ EA ELI+ +P + V + GALLS+ YGNV +++ L +E +DS +
Sbjct: 459 AGLVGEAVELIKTMPMPPD---VQILGALLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIY 515
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
LL+N+YA+ +W +V +VR+ MK+ G+ K PG S I ++G+ HEFLVGD SH + +EIY
Sbjct: 516 VLLSNLYATNKKWAEVRSVRRLMKQKGISKAPGSSIIRVDGMSHEFLVGDNSHPQSEEIY 575
Query: 591 SMLDRMAKTL 600
+L+ +A +
Sbjct: 576 VLLNILANQI 585
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/600 (37%), Positives = 343/600 (57%), Gaps = 54/600 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+KQ+ AQI + L ++ KL+ + NL A ++F +Q P + N LI
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVHLCNSLI 89
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV---GWLGEVKKGEKVHGYVVKT 117
+A A+ ++ +FS+++ G+ DNFTYPF+ KA WL VK +H ++ K
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVK---MMHNHIEKL 146
Query: 118 GLEFDTYVCNSIMDMYGVLG--KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
GL D YV N+++D Y G + + KLF++M ++D VSWN + G VK DA
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+F M Q ++L I N +LD Y
Sbjct: 207 LFDEMPQ---------------------RDL------------------ISWNTMLDGYA 227
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RDIVLWTAMI 293
+C +S+A ELF++MP +N + W++MV GY G +E AR +FD+ P+ +++V WT +I
Sbjct: 228 RCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY + EA L +M LK D ++++L C + G L G IH + + +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+A V AL++MYAKCG ++KA ++F ++ +KD SW +++ GL ++G +A+ELFS+M
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G +PD +TFI VL +C+H GL+DEG +F +M +VY + P++EHYGCL+DLLGR G
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA ++++ +P E N +I +GALL ACR++ VD+ +++ L K++ D ++LL
Sbjct: 468 LKEAIKVVQTMPMEPNVVI---WGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLL 524
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA+A WE V ++R KMK MGV K G SS+E+ IHEF V D SH + +IY ML
Sbjct: 525 SNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 355/609 (58%), Gaps = 18/609 (2%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ ++F L++N + N ++ C G L A IF + ++N +I F +
Sbjct: 72 VARKLFDRMLERNIFSWNSII--CAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQH 129
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G F ++L+ F+++ G + +++ A L ++K G ++H V ++ D Y+
Sbjct: 130 GRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG 189
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
++++DMY G++ + +FDEM + VSWN I+ + + ++A+ +F M + C +
Sbjct: 190 SALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIK-CGV 248
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEAR 244
PDE T+ S +SAC + ++ G++IH + + EF I+GNALLDMY KC ++EAR
Sbjct: 249 EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEAR 308
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+FD MP ++V+ TSMVSGY +++ AR +F V+D++ W A+I G Q +E
Sbjct: 309 IIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEE 368
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV------DAVV 358
A+ LFR ++ + P + LL CA L L+ G+ H ++ ++ D V
Sbjct: 369 ALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFV 428
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+LI+MY KCG +E +F + EKD SW ++I G A NG NKALE+F +M+ G
Sbjct: 429 GNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGE 488
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD +T IGVL ACSH GL+DEGR +F +MT + + P +HY C++DLLGRAG L+EA+
Sbjct: 489 APDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAK 548
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
LI ++ + + I+ +G+LL+AC+++ N+ +GE + L +++ ++S + LL+N+YA
Sbjct: 549 NLIEEMSMQPDAIV---WGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYA 605
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
W++V VR+ M++ GV K PGCS IEI G ++ F+V D H+ KEIY +L +
Sbjct: 606 ENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL----R 661
Query: 599 TLLDSKQNA 607
T+L + A
Sbjct: 662 TILQQMKQA 670
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 1/301 (0%)
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEAR 244
L D L+ C ++ +H I + N L+D+Y KCGC+ AR
Sbjct: 15 LFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 74
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+LFD M +N+ W S++ + G L+ A +F++ P D W +MI+G+ Q RFDE
Sbjct: 75 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 134
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A+ F +M +++ + L+ CA L L+ G IH + + D + +AL++
Sbjct: 135 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 194
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY+KCG +E A +F E+ + SW S+I NG +++AL++F +MI G +PD++T
Sbjct: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
V+SAC+ + EG++ + + + + L L+D+ + ++EA + +
Sbjct: 255 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 314
Query: 485 P 485
P
Sbjct: 315 P 315
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 210/450 (46%), Gaps = 84/450 (18%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
+ +VH ++K+ +T++ N ++D+YG G + +KLFD M ++++ SWN I
Sbjct: 36 RDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAF 95
Query: 165 VKCMRFEDAVDVFRRMRQ------------------------------GCNLMPDEGTVV 194
K +DAV +F +M Q G + +E +
Sbjct: 96 TKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFG 155
Query: 195 STLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNK 253
S LSAC L++L+LG +IH + + + + MG+AL+DMY KCG + A+ +FDEM +
Sbjct: 156 SALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVR 215
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+ + W S+++ Y G PV DEA+ +F EM
Sbjct: 216 SRVSWNSLITCYEQNG------------PV-------------------DEALKIFVEMI 244
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLI 372
++PD+ L ++++ CA + A+++G+ IH + + + D ++ AL++MYAKC I
Sbjct: 245 KCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRI 304
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+A IF + + S TS++ G A K+ A +FS M+ D IT+ +++ C
Sbjct: 305 NEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMV----KDVITWNALIAGC 360
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL--------LGRAGLLDEAEELIRKI 484
+ G +E F + + P +G L++ LGR + R
Sbjct: 361 TQNGENEEALILFRLLKR-ESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQ 419
Query: 485 PNENNEI-----IVPLY---GALLSACRIY 506
E++++ ++ +Y G++ + CR++
Sbjct: 420 YGEDSDVFVGNSLIDMYMKCGSVENGCRVF 449
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/605 (36%), Positives = 341/605 (56%), Gaps = 52/605 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAY--NL 58
+ L+++ AQ+ + GL +P +KL+ ++ H L + +F S +P + N
Sbjct: 37 LHHLQELHAQLLKHGLHLDPVAASKLL--SSYALHRRLPASRGVFASFPNPHATTFLPNT 94
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
L++A+A R+++ +FS + R D+FTY F+ KA+ G V VH +VVK G
Sbjct: 95 LLRAYALNALPREAVAVFSAMPHR----DSFTYSFLIKALSSAG-VAPLRAVHSHVVKLG 149
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
DTYV N+++D Y G + K+F+EMP +DVVSWN +++ V+ E A R
Sbjct: 150 SIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGA----R 205
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
RM ++ LE + N LLD Y K G
Sbjct: 206 RM-----------------------------------FDEMLEKDTVSWNTLLDGYTKAG 230
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ EA +LF MP +NV+ W+++VSGY G +E AR +FD+ P +++V WT M++ Q
Sbjct: 231 DVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQ 290
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+EA LF +M+ ++ D +V++L CA+ G+L GK IH Y+ ++ V
Sbjct: 291 NGLVEEAGKLFTQMKEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHV 350
Query: 359 ATALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
ALI+M+ KCG I +A +F E+ EKD+ SW +II G AM+G +KAL+ F+QM G
Sbjct: 351 CNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQG 410
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
PD +T I VLSAC+H G V+EGRR+F M Y + P++EHYGC+IDLLGR GL+ EA
Sbjct: 411 FCPDAVTMINVLSACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEA 470
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
+LI+ +P + NE+I +G+LLSACR++ NV+ E L K++ ++ + +L++IY
Sbjct: 471 VDLIKSMPWDPNEVI---WGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIY 527
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
A A +W D+ R +MK G +K G S IE++ HEF VGD H + +I M+DR++
Sbjct: 528 AEAGKWSDMAKARMQMKGTGSQKSSGSSWIELDEAFHEFTVGDRKHPDSDQISEMVDRLS 587
Query: 598 KTLLD 602
D
Sbjct: 588 SHAKD 592
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/506 (40%), Positives = 313/506 (61%), Gaps = 27/506 (5%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK---------LFDEMPDKDVVSWN 158
++ H +++ GL D D G + K C + K +FD++P D +N
Sbjct: 37 KQYHSQIIRLGLSADN-------DAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYN 89
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
G+++ + + ++ RM ++ P++ T + AC +E GK+IH ++
Sbjct: 90 TIFRGYLRWQLARNCIFMYSRMLHK-SVSPNKFTYPPLIRACCIDYAIEEGKQIHAHV-- 146
Query: 219 ELEF----TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
L+F N L+ MY L +AR +FD MP ++V+ WTS+++GY G ++KA
Sbjct: 147 -LKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKA 205
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
R++F+ P R+ V W AMI YVQ NR EA ALF M++ + DKF+ ++L+ C L
Sbjct: 206 REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 265
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
GALEQGKWIHGYI ++ I +D+ +AT +I+MY KCG +EKA E+F EL +K +SW +I
Sbjct: 266 GALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI 325
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
GLAM+GK A+ELF +M PD ITF+ VLSAC+H GLV+EG+ +F MTEV +
Sbjct: 326 GGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGL 385
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
+P +EH+GC++DLLGRAGLL+EA +LI ++P + ++ GAL+ ACRI+GN ++GE+
Sbjct: 386 KPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL---GALVGACRIHGNTELGEQ 442
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
+ + ++E +S + LLAN+YASA RWEDV VR+ M + GV+K PG S IE +
Sbjct: 443 IGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVD 502
Query: 575 EFLVGDPSHSEMKEIYSMLDRMAKTL 600
EF+ G +H + KEIY+ LD + +T+
Sbjct: 503 EFIAGGRAHPQAKEIYAKLDEILETI 528
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 199/415 (47%), Gaps = 65/415 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LKQ +QI ++GL + + + +++ FC G+L YA ++F I P YN +
Sbjct: 33 MAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIF 92
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + + R + ++S++ + VSP+ FTYP + +A +++G+++H +V+K G
Sbjct: 93 RGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 152
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV-------------------------- 154
D + N+++ MY + +++FD MP +DV
Sbjct: 153 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELM 212
Query: 155 -----VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
VSWN I+ +V+ R +A +F RMR N++ D+ S LSACT L LE G
Sbjct: 213 PERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLE-NVVLDKFVAASMLSACTGLGALEQG 271
Query: 210 KEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
K IH YI + +E + ++DMYCKCGCL +A E+F+E+P K + W M+ G
Sbjct: 272 KWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMH 331
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G+ E A+ LF+EM+ + PD V +L
Sbjct: 332 GKGEA-------------------------------AIELFKEMEREMVAPDGITFVNVL 360
Query: 329 TGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+ CA G +E+GK Y+ E + ++++ + GL+E+A ++ E+
Sbjct: 361 SACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEM 415
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/499 (39%), Positives = 307/499 (61%), Gaps = 10/499 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+++ ++ +G FD + I+ V G I + LF +P + WN +
Sbjct: 30 KQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFT 89
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
+ +++ M +P+ T L AC L +L G +H + + E
Sbjct: 90 DKKEPATVLSLYKYMLS-TGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYD 148
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+ N LL +Y C C+ AR LFD N++V+ WT++++GY GQ+ AR LFD P +
Sbjct: 149 FVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEK 208
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ V W+AMI GY Q F EA+ LF +MQI +P+ +V LT CA LGAL+QG+WIH
Sbjct: 209 NAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIH 268
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
Y++ NR+ +D ++ TALI+MYAKCG +E A +F E+ ++D ++TS+I GLA +G
Sbjct: 269 AYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSA 328
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
A+E+F++M + G P+++TFI +LSACS GLV+EG R F +MT +Y I+P ++HYGCL
Sbjct: 329 TAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCL 388
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAG+L++A+ ++R++P E + ++ GALL+ACR++G+V++G++ L +
Sbjct: 389 VDLLGRAGMLEDAKRVVREMPLEPDSYVL---GALLNACRVHGDVELGKETVECLAERSL 445
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
H LL+N+YASAN+WEDV VR+ M+E V+KVPGCS IE++G + EF+ GD SH
Sbjct: 446 DHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHV 505
Query: 585 EMKEIYSML---DRMAKTL 600
M EI +L D+ K+L
Sbjct: 506 FMDEIVLLLLGIDKHLKSL 524
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 193/416 (46%), Gaps = 67/416 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +KQIQ+ + G +P +++ FC + G++ +A +F S+ +N ++
Sbjct: 26 MAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTML 85
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AF K L L+ + G P+N+T+ F+ +A L ++ G +H V+ G E
Sbjct: 86 RAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWE 145
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR----------- 169
+V N ++ +Y + + ++LFD ++DVV+W I+G+ K +
Sbjct: 146 AYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEM 205
Query: 170 --------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
F +A+++F M Q P+ G +V L+AC L L+ G
Sbjct: 206 PEKNAVSWSAMITGYAQIGLFREALELFNDM-QIAGFRPNHGAIVGALTACAFLGALDQG 264
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ IH Y+++ + I+G AL+DMY KCGC+ A +FDEM +++V +TS++SG N
Sbjct: 265 RWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANH 324
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G A ++F R MQ + P++ + LL
Sbjct: 325 GHSATAIEMFTR-------------------------------MQNEGVCPNEVTFICLL 353
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYEL 382
+ C+++G +E+G I + N ++ VV L+++ + G++E A + E+
Sbjct: 354 SACSRVGLVEEGLRIFKSMT-NIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 408
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/499 (39%), Positives = 307/499 (61%), Gaps = 10/499 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+++ ++ +G FD + I+ V G I + LF +P + WN +
Sbjct: 5 KQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFT 64
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
+ +++ M +P+ T L AC L +L G +H + + E
Sbjct: 65 DKKEPATVLSLYKYMLS-TGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYD 123
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+ N LL +Y C C+ AR LFD N++V+ WT++++GY GQ+ AR LFD P +
Sbjct: 124 FVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEK 183
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ V W+AMI GY Q F EA+ LF +MQI +P+ +V LT CA LGAL+QG+WIH
Sbjct: 184 NAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIH 243
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
Y++ NR+ +D ++ TALI+MYAKCG +E A +F E+ ++D ++TS+I GLA +G
Sbjct: 244 AYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSA 303
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
A+E+F++M + G P+++TFI +LSACS GLV+EG R F +MT +Y I+P ++HYGCL
Sbjct: 304 TAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCL 363
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAG+L++A+ ++R++P E + ++ GALL+ACR++G+V++G++ L +
Sbjct: 364 VDLLGRAGMLEDAKRVVREMPLEPDSYVL---GALLNACRVHGDVELGKETVECLAERSL 420
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
H LL+N+YASAN+WEDV VR+ M+E V+KVPGCS IE++G + EF+ GD SH
Sbjct: 421 DHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHV 480
Query: 585 EMKEIYSML---DRMAKTL 600
M EI +L D+ K+L
Sbjct: 481 FMDEIVLLLLGIDKHLKSL 499
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 193/416 (46%), Gaps = 67/416 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +KQIQ+ + G +P +++ FC + G++ +A +F S+ +N ++
Sbjct: 1 MAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTML 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AF K L L+ + G P+N+T+ F+ +A L ++ G +H V+ G E
Sbjct: 61 RAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWE 120
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR----------- 169
+V N ++ +Y + + ++LFD ++DVV+W I+G+ K +
Sbjct: 121 AYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEM 180
Query: 170 --------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
F +A+++F M Q P+ G +V L+AC L L+ G
Sbjct: 181 PEKNAVSWSAMITGYAQIGLFREALELFNDM-QIAGFRPNHGAIVGALTACAFLGALDQG 239
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ IH Y+++ + I+G AL+DMY KCGC+ A +FDEM +++V +TS++SG N
Sbjct: 240 RWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANH 299
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G A ++F R MQ + P++ + LL
Sbjct: 300 GHSATAIEMFTR-------------------------------MQNEGVCPNEVTFICLL 328
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYEL 382
+ C+++G +E+G I + N ++ VV L+++ + G++E A + E+
Sbjct: 329 SACSRVGLVEEGLRIFKSMT-NIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 383
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/592 (36%), Positives = 331/592 (55%), Gaps = 45/592 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+L QIQAQI GL+ N + C+ + +A K+F I P +N + +
Sbjct: 27 RLHQIQAQIVTHGLEHNDFVAPNFITTCSR--FKRIHHARKLFDKIPQPNTATWNAMFRG 84
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ + G R +++LF +L P+ FT+P + K+ G L V++GE+VH K G + +
Sbjct: 85 YLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSN 144
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
++V S++DMY G + + K+F EM +++VV W I+G++ C
Sbjct: 145 SFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILC--------------- 189
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
G VVS R + E +M + L+ Y + ++
Sbjct: 190 --------GDVVSG----------------RRLFDLAPERDVVMWSVLISGYIESKNMAA 225
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
ARELFD+MPN++ + W +M++GY G++E +FD P R++ W +I GYV+ F
Sbjct: 226 ARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLF 285
Query: 303 DEAVALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
E + F+ M + + P+ F LVA+L+ C++LGAL+ GKW+H Y + V
Sbjct: 286 SETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNV 345
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MYAKCG+IE A+ +F L KD SW +II GLA++G AL +F +M S G +PD
Sbjct: 346 LIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPD 405
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+TF+G+LSAC+H GLV +G +F +M + Y I P++EHYGC++DLLGRAGLLD+A I
Sbjct: 406 GVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFI 465
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
RK+P E + +I + ALL ACR+Y NV++ E L ++E + + +++NIY
Sbjct: 466 RKMPIEPDAVI---WAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLG 522
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
R EDV ++ M++ G RK+PGCS IE N + EF D HSE + IY +L
Sbjct: 523 RSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVL 574
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 156/358 (43%), Gaps = 50/358 (13%)
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
++ AR LFD+ P + W AM GY+Q + V LF E+ I P+ F ++
Sbjct: 59 RIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIK 118
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C +L + +G+ +H ++ ++ VAT+LI+MY+K G +E A ++F E+ E++
Sbjct: 119 SCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVV 178
Query: 390 WTSIICGLAMNGKINKALELF-----------SQMISGGAKP----------------DD 422
WT+II G + G + LF S +ISG + D
Sbjct: 179 WTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDT 238
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+++ +L+ + G V+ + F+ M E + + LI + GL E E +
Sbjct: 239 MSWNAMLNGYAVNGEVEMFEKVFDEMPE-----RNVFSWNGLIGGYVKNGLFSETLESFK 293
Query: 483 KIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF-HTLLANIYA 538
++ E + ++P A+LSAC G +DMG+ + E I K + F +L ++YA
Sbjct: 294 RMLVEGH--VIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYA 351
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
E+ V + + I N II+ + H + M DRM
Sbjct: 352 KCGVIENAVVVFNCLDRKDI--------ISWNTIINGLAI----HGHAPDALGMFDRM 397
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 351/598 (58%), Gaps = 17/598 (2%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVF--CTHPSHGNLLYAEKIFGSIQS-PCLLAYNL 58
TQ KQI + + L +++L+ F +HP NL A +F P L +N
Sbjct: 45 TQFKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPE--NLELAILLFNHFTPYPNLYIFNT 102
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+I F S K+ ++ + + G PD T+ ++ + ++ EVK+ +H + + G
Sbjct: 103 MILGFP--FSNEKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVKQ---IHCHALVFG 157
Query: 119 L-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
L + Y+ NS++ Y G ++LFDEM D++VVS+N I G K +++F
Sbjct: 158 LLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELF 217
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP-IMGNALLDMYCK 236
MR L PD+ T++ L C L +LGK +H I + + + I+ NALLDMY K
Sbjct: 218 HDMRSH-GLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVK 276
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C L AR++FD K+ + W ++++GY G+LE A DLF++ P RDIV W ++I+GY
Sbjct: 277 CNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGY 336
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q + LF M +KPDK +V L++ A++GAL+QG+WIHG + ++A
Sbjct: 337 AQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEA 396
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ALI+MY KCG IE+A IF ++ EKD +WT++I G A +G NKALELFS M
Sbjct: 397 FSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVM-QA 455
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KP+D+TF+ VL+ACSH GLVDEG + F++M + Y I+P +EHYGCL+DLL R+G L +
Sbjct: 456 ETKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLD 515
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A +I K+P E + I +GA+LSACR++ N+++ E+ L K+E + + LL+N+
Sbjct: 516 AIGVIEKMPMEPSRSI---WGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNV 572
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
YA+ RW ++R+ M GV+K+ GCSS+ ++G++H+F + H +I S+L
Sbjct: 573 YATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILS 630
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/533 (36%), Positives = 326/533 (61%), Gaps = 11/533 (2%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F IQ P LL +N +I +K ++ ++ + +G+ + T+ F+FK+
Sbjct: 25 AHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCAR 84
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ +V++G+ V + +K G E ++V N+++ MY G++ +K+FD M ++DVVSWN
Sbjct: 85 VSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSI 144
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I G+ + RF+ +D+FR M Q N+ D T++ +SA L E+G + +YI++
Sbjct: 145 ICGYYQFNRFKKVLDLFREM-QAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHG 203
Query: 221 EFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ +GN L+DMY + G + A +F +M KN++ W +M+ GY G L A+ LF+
Sbjct: 204 VVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFN 263
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P RD++ WT+MI GY + EAV LF+EM + +KPD+ + L+ CA LG+L+
Sbjct: 264 EMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDA 323
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G+ +H YI ++ I D V +LI+MY KCG++EKAL++F +++ +D+ SWTSII GLA+
Sbjct: 324 GEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAV 383
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
NG AL +F QM+ G P TF+GVL AC+H GLVD+G F +M Y++ P+++
Sbjct: 384 NGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMK 443
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLA 516
HYGC++DLL R+G LD A I+K+P IVP ++ LLSAC+++GN+ + E ++
Sbjct: 444 HYGCVVDLLCRSGYLDMAYNFIKKMP------IVPDVVIWRILLSACKLHGNLVLAEIVS 497
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
L ++ ++ + L ++ YA ++RW+DV +R+ M+ ++K SSIE+
Sbjct: 498 KKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 550
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 174/359 (48%), Gaps = 48/359 (13%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKL--MVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
Q + ++ ++G + N L M C G L A+K+F + ++++N +I
Sbjct: 90 QGQMVRVHSMKLGFESXSFVSNALIHMYVC----FGELAMAQKVFDGMLERDVVSWNSII 145
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + F+K L LF +++ V D+ T A +L E + G+ + Y+ + G+
Sbjct: 146 CGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVV 205
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK-------------- 166
D Y+ N+++DMYG G I ++F +M +K++VSWN I G+ K
Sbjct: 206 VDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEM 265
Query: 167 -----------------CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
+ +AV +F+ M + PDE TV + LSAC L +L+ G
Sbjct: 266 PSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSM-VKPDEITVATALSACAHLGSLDAG 324
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ +H YI + +++ +GN+L+DMYCKCG + +A ++F++M ++ + WTS++SG
Sbjct: 325 EAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVN 384
Query: 269 GQLEKARDLFDR------SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ-IIRLKPD 320
G E A ++FD+ P + + +V D+ V F+ M+ RL P+
Sbjct: 385 GFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGL--VDKGVEHFKSMENTYRLAPE 441
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 16/295 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GNL+ A+K+F + S ++++ +I ++ +++ LF ++ V PD T
Sbjct: 253 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATAL 312
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + GE VH Y+ K ++ D +V NS++DMY G + ++F++M +D V
Sbjct: 313 SACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV 372
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
SW ISG E A++VF +M ++G + P GT V L AC + ++ G E +
Sbjct: 373 SWTSIISGLAVNGFAESALNVFDQMLKEG--ICPTHGTFVGVLLACAHVGLVDKGVEHFK 430
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+ P M + ++D+ C+ G L A +MP +V+ W ++S G L
Sbjct: 431 SMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNL 490
Query: 272 ------EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL-KP 319
K + D S + VL ++ Y +R+D+ + + + M++ L KP
Sbjct: 491 VLAEIVSKKLLVLDPSNNGNYVLSSST---YAGSDRWDDVIKIRKLMEVTNLQKP 542
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 8/284 (2%)
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
L KA +F++ +++W MI+G + +R ++A+ + M ++ + L
Sbjct: 21 SLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFK 80
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
CA++ + QG+ + + + + V+ ALI MY G + A ++F + E+D S
Sbjct: 81 SCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVS 140
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W SIICG + K L+LF +M + + D +T + +SA + G +
Sbjct: 141 WNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYID 200
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
E + + L LID+ GR G++D A + ++ +N IV ++ ++ GN+
Sbjct: 201 E-HGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKN---IVSWNAMIMGYAKV-GNL 255
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+K L ++ S+D T + Y+ A + + + Q+M
Sbjct: 256 VAAKK---LFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEM 296
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/589 (36%), Positives = 343/589 (58%), Gaps = 38/589 (6%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G + +LNKL+ + YA +F + +L +N +++AF R++L
Sbjct: 5 GFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQ 64
Query: 75 LFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
++++ ER + PD FT+P + K L E K G+ +HG VVK L D Y+ ++++MY
Sbjct: 65 SYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMY 124
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
G + + + LF+ M ++ V W ISG++K +A+ ++++M + PDE T+
Sbjct: 125 AACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEED-GFSPDEVTM 183
Query: 194 VSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
+ +SAC LK+L +G ++H +I + +++ ++G+AL++MY KC
Sbjct: 184 ATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC--------------- 228
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
G L+ AR +FD+ +D+ W+A+I GYV+ NR EA+ LFRE+
Sbjct: 229 ----------------GDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREV 272
Query: 313 QI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
++P++ ++A+++ CAQLG LE G+W+H YI + + +LI+M++KCG
Sbjct: 273 AGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGD 332
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
I+ A IF + KD SW S++ G A++G +AL F M + +PD+ITFIGVL+A
Sbjct: 333 IDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTA 392
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
CSH GLV EG++ F + +Y ++ K EHYGC++DLL RAGLL EA E IR +P + +
Sbjct: 393 CSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGA 452
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I +G++L ACR+Y N+++GE+ A L K+E + + LL+NIYA W +V VR+
Sbjct: 453 I---WGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRE 509
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
M E G++K PGCSS+ I+ I H FL GD SH E+ EI ML ++ + L
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKL 558
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/531 (38%), Positives = 322/531 (60%), Gaps = 11/531 (2%)
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL--EFDTYVCNSIMDMY 133
F+ R + T+ F+ + G L ++K+ +HG V GL ++ +++ Y
Sbjct: 242 FASYTNRNAHMNTQTFYFLLQKCGSLEKLKQ---IHGKAVTLGLLCSKRQHLACKLLNTY 298
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
LG + +K+F+ + + D+VSW IS ++ + A +F + L PD V
Sbjct: 299 TQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHS-GLRPDSFCV 357
Query: 194 VSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
V +SAC K+L G+ +H + + EL PI+GNAL+DMY + G + A +F M
Sbjct: 358 VGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEI 417
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+V WTS+++G++ C +E AR +FD P+R+ V WTAMI GYVQ + LF+EM
Sbjct: 418 KDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEM 477
Query: 313 QII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
+ + P +VA+L+GCA +GA + G +HGY+N+ + +D V AL++MYAK G
Sbjct: 478 RAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGA 537
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
+ AL+IF E+ ++D SWT++I GLA++GK ALE FS M G P+++T + VLSA
Sbjct: 538 LVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSA 597
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
CSH GLV EGR F M + + I+PK++HYGC++DLLGRAGLL EA+ELI +P + + +
Sbjct: 598 CSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSV 657
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I + +LLSAC ++GN+ + E ++ ++E D + LL NIY SA+RWED R+
Sbjct: 658 I---WRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARK 714
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
M++ V+K PGCS +E+NG++HEFL D H ++Y++L+ + + + D
Sbjct: 715 AMRDRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMKD 765
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/513 (38%), Positives = 315/513 (61%), Gaps = 7/513 (1%)
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL--GKICNVKKLFDE 148
YP + + + +K ++H + TG+ D +V + I+ + G I + LF
Sbjct: 36 YP-ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYR 94
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+ D+ N I + DAV + M + + PD T L AC+ + +L L
Sbjct: 95 IRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRL 154
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+ IH ++ + + + + N L+ MY CG + A +FD P + W M+ GY+
Sbjct: 155 GEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLK 214
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
CG + AR +F+ P RD+V W+ MINGYVQ +RF E + LF++M +++P++ +LV
Sbjct: 215 CGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNA 274
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+ CA LGA+EQG+WI Y+ + + + TALI+MY+KCG +E+ALE+F++++EK+
Sbjct: 275 LSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNV 334
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
+W+++I GLA+NG+ AL LFSQM G KP+++TFIG+L+ACSH LVDEG FF++
Sbjct: 335 LAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHS 394
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
MT +Y ++P H+ C++DL GRAG+LD+A+ +I+ +P + N I +GALL+ACRI+G
Sbjct: 395 MTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAI---WGALLNACRIHG 451
Query: 508 NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+ ++GE++ L +++ + LL+NIYA+ RW+ V +R+ M+E V K PGCS I
Sbjct: 452 DTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFI 511
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++ IHEF+ GD SH +++ IY+ L M++ L
Sbjct: 512 DLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQEL 544
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 208/435 (47%), Gaps = 65/435 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L QI AQ G+ + ++++ F HG++ YA +F I+ P + N LI
Sbjct: 48 LKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLI 107
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+A+A + +++ +S++ E V PD T+P + KA + ++ GE +H +V K G
Sbjct: 108 RAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGW 167
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR- 178
+ V N ++ MY G I + +FD P+ D SWN+ I G++KC F+ A +F
Sbjct: 168 SSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEA 227
Query: 179 --------------------RMRQGCNLM---------PDEGTVVSTLSACTALKNLELG 209
R ++G L P+E +V+ LSAC L +E G
Sbjct: 228 MPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQG 287
Query: 210 KEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ I RY+ ++ + T +G AL+DMY KCG + A E+F +M KNV+ W++M++G
Sbjct: 288 QWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLA-- 345
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
ING + +A+ LF +M++ +KP++ + +L
Sbjct: 346 ------------------------ING-----QGKDALNLFSQMEMQGVKPNEVTFIGIL 376
Query: 329 TGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-D 386
C+ +++G + H + + +A ++++Y + G++++A + + K +
Sbjct: 377 NACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPN 436
Query: 387 AASWTSIICGLAMNG 401
+A W +++ ++G
Sbjct: 437 SAIWGALLNACRIHG 451
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/500 (40%), Positives = 309/500 (61%), Gaps = 6/500 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDM-YGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+K +K+H ++KTGL DT + ++ G I +F ++ + ++ WN I
Sbjct: 9 MKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTIIR 68
Query: 163 GHVKCMRFEDAVDVF-RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQEL 220
G + +A+ +F M P T S A L G ++H R I L
Sbjct: 69 GFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGL 128
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
E + N +L+MY CG L EA+ +FD +V+ W +M+ G CG+++K+R LFD+
Sbjct: 129 ENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDK 188
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
+R+ V W +MI+GYV+ RF EA+ LF MQ +KP +F +V+LL CA LGAL QG
Sbjct: 189 MLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQG 248
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+WIH YI +N ++++V TA+I+MY+KCG I+KAL++F +K + W S+I GLAM+
Sbjct: 249 EWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMS 308
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ N+A+ LFS++ S KPD ++FIGVL+AC+H G+VD + +F M+E Y+I+P ++H
Sbjct: 309 GRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKH 368
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C++D+LGRAGLL+EAEELI+ +P + II +G+LLS+CR YGN++M ++ A +
Sbjct: 369 YSCMVDVLGRAGLLEEAEELIKSMPVNPDAII---WGSLLSSCREYGNIEMAKQAAKRVN 425
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+++ +SS LL+N+YA+ N +E+ R +KE + K PGCS IE+NG +HEF+ G
Sbjct: 426 ELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVHEFVAGG 485
Query: 581 PSHSEMKEIYSMLDRMAKTL 600
H K+IY LD + TL
Sbjct: 486 RLHPRSKDIYHALDDLGLTL 505
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 215/442 (48%), Gaps = 69/442 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M L++I AQ+ + GL ++ ++++ FCT P+ G++ YA +F I++P L +N +I
Sbjct: 9 MKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPA-GDINYAYLVFTQIRNPNLFVWNTII 67
Query: 61 KAFAKKGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ F++ + ++ LF + P TYP VFKA LG +G ++HG V+K G
Sbjct: 68 RGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLG 127
Query: 119 LEFDTYVCNSIMDMY---GVL----------------------------GKICNVKKLFD 147
LE D ++ N+I++MY G L G+I ++LFD
Sbjct: 128 LENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFD 187
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+M ++ VSWN ISG+V+ RF +A+++F RM++ + P E T+VS L+AC L L
Sbjct: 188 KMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEE-GIKPSEFTMVSLLNACACLGALR 246
Query: 208 LGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
G+ IH YI I+ A++DMY KCG + +A ++F P K + CW S++ G
Sbjct: 247 QGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLA 306
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G R +EAV LF +++ LKPD +
Sbjct: 307 MSG-------------------------------RGNEAVRLFSKLESSNLKPDHVSFIG 335
Query: 327 LLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELR-E 384
+LT C G +++ K ++E +I + ++++ + GL+E+A E+ +
Sbjct: 336 VLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVN 395
Query: 385 KDAASWTSIICGLAMNGKINKA 406
DA W S++ G I A
Sbjct: 396 PDAIIWGSLLSSCREYGNIEMA 417
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 138/277 (49%), Gaps = 7/277 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + + ++F + +++N +I + +KG F +++ LFS+++E G+ P FT +
Sbjct: 177 GEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLL 236
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG +++GE +H Y+VK ++ V +I+DMY G I ++F P K +
Sbjct: 237 NACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLS 296
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
WN I G R +AV +F ++ + NL PD + + L+AC ++ K+
Sbjct: 297 CWNSLILGLAMSGRGNEAVRLFSKL-ESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLL 355
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE 272
+++ + P + + ++D+ + G L EA EL MP N + I W S++S G +E
Sbjct: 356 MSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIE 415
Query: 273 KARDLFDRSPVRDIVLWTAMI---NGYVQFNRFDEAV 306
A+ R D ++ I N Y N F+EA+
Sbjct: 416 MAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAI 452
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/551 (36%), Positives = 320/551 (58%), Gaps = 34/551 (6%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
YN +I+ K F ++ L++ + + + PD+FT+ FV KA L G +H V
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
KTG + D +V +++ Y G + + K+FD+M K+VVSW I G ++ +F +AVD
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+FR + + L PD +V L AC L +LE G+ I R + +
Sbjct: 192 LFRGLLES-GLRPDGFVIVRVLRACARLGDLESGRWIDRCMRE----------------- 233
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
CG ++NV TS+V Y CG +E+AR +FD +DIV W+AMI G
Sbjct: 234 -CGL------------SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQG 280
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Y EA+ LF EM+ + ++PD + +V L+ CA LGALE G W G +N +
Sbjct: 281 YASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSN 340
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V+ T+LI+ YAKCG +E+AL ++ ++EKD + ++I GLAM G++ A +F QM
Sbjct: 341 PVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGK 400
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G P++ TF+G+L C+H GLVD+GR +FN+M+ + + P +EHYGC++DLL RAG LD
Sbjct: 401 FGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLD 460
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA LI+ +P + N I+ +G+LL CR++ + E + L ++E +S + LL+N
Sbjct: 461 EAHNLIKGMPMKANVIV---WGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSN 517
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IY+++ RW++ +R + E G++K+PG S +E++G++HEFLVGD SH ++IY L+
Sbjct: 518 IYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLES 577
Query: 596 MAKTLLDSKQN 606
+ K L ++ N
Sbjct: 578 LFKDLKEAGYN 588
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 194/412 (47%), Gaps = 39/412 (9%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I + +F+ G + + K V C + G L A K+F + ++++ +I +
Sbjct: 126 IHSLVFKTGF--DCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEF 183
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G FR+++ LF L E G+ PD F V +A LG+++ G + + + GL + +V
Sbjct: 184 GKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVA 243
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
S++DMY G + + +FD M +KD+V W+ I G+ +A+++F MR+ N+
Sbjct: 244 TSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRK-VNV 302
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMYCKCGCLSEAR 244
PD +V LS+C +L LELG +N E EF P++G +L+D Y KCG + EA
Sbjct: 303 RPDCYAMVGALSSCASLGALELGNWAKGLMNYE-EFLSNPVLGTSLIDFYAKCGSMEEAL 361
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
++ M K+ + + +++SG GQ+
Sbjct: 362 GVYKMMKEKDRVVFNAVISGLAMYGQV-------------------------------GA 390
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALI 363
A +F +M + P++ V LL GC G ++ G+ + + ++ +T ++
Sbjct: 391 AFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMV 450
Query: 364 EMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMI 414
++ A+ G +++A + + K + W S++ G ++ + A + Q+I
Sbjct: 451 DLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLI 502
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 36/313 (11%)
Query: 277 LFDRSPVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+F ++P + L+ MI G V +RF+ AV L+ M + PD F +L CA+L
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
G IH + + D V T ++ Y+KCG + A ++F ++ K+ SWT +IC
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G GK +A++LF ++ G +PD + VL AC+ G ++ GR M E +
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMREC-GLS 237
Query: 456 PKLEHYGCLIDLLGRAGLLDEA----EELIRK----------------IPNENNEIIV-- 493
+ L+D+ + G ++EA + ++ K +P E E+
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEM 297
Query: 494 ----------PLYGALLSACRIYGNVDMGEKLAALLEKIES-KDSSFHTLLANIYASANR 542
+ GA LS+C G +++G L+ E + T L + YA
Sbjct: 298 RKVNVRPDCYAMVGA-LSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGS 356
Query: 543 WEDVTNVRQKMKE 555
E+ V + MKE
Sbjct: 357 MEEALGVYKMMKE 369
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 330/597 (55%), Gaps = 77/597 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQS-PCLLAYNLL 59
M QL +IQAQI + + + SHGNL ++ IF S P + AYN L
Sbjct: 37 MRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNAL 96
Query: 60 IKAFAKKGSFRKSLLLFSK--LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+KAF++ ++ ++ F+ + +PD +T+ V KA L +V +G+KVH +V K
Sbjct: 97 LKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKY 156
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G E + +V NS++D+Y +G C +KLFDEM +DVVSWN ISG+ F VD
Sbjct: 157 GCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYC----FSGMVDKA 212
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
R + G +E + + ++ Y +
Sbjct: 213 RMVFDGM-----------------------------------MEKNLVSWSTMISGYARV 237
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G L EAR+LF+ MP +NV+ W +M++ GY
Sbjct: 238 GNLEEARQLFENMPMRNVVSWNAMIA-------------------------------GYA 266
Query: 298 QFNRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q ++ +A+ LFR+MQ L P+ LV++L+ CA LGAL+ GKWIH +I N+I V
Sbjct: 267 QNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGL 326
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ AL +MYAKCG + +A +F+E+ E+D SW+ II GLAM G N+A F++MI
Sbjct: 327 FLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIED 386
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G +P+DI+F+G+L+AC+H GLVD+G +F+ M +VY I PK+EHYGC++DLL RAG LD+
Sbjct: 387 GLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQ 446
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
AE LI +P + N I+ +GALL CRIY + + GE++ + +++S S LAN+
Sbjct: 447 AESLINSMPMQPNVIV---WGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANV 503
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
YAS R +D + R +M++ K PGCS IEIN ++EF +GD SH + IYSM+
Sbjct: 504 YASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMI 560
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/570 (37%), Positives = 346/570 (60%), Gaps = 20/570 (3%)
Query: 31 THPSHGNLLYAEKIFGSIQ-SPCLLAYNLLIKAFAKKGSFRK--SLLLFSKLRERGVSPD 87
+HP NL A +F +P L YN LI AF+ S +K S L++ L G PD
Sbjct: 11 SHPD--NLDLAITLFNHFTPNPNLFIYNTLISAFS---SLKKIESFYLYNVLLSSGECPD 65
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD 147
T ++ +AV ++ +VK+ +H + TGL Y+ N+++ +Y G + ++F+
Sbjct: 66 KQTLLYLLQAVNFISQVKQ---IHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFE 122
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+MP D+VS+NV I G+ K +A+ +F M G L PDE T++ L +C L N++
Sbjct: 123 KMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEM-VGLGLEPDEFTILGLLVSCGQLGNVK 181
Query: 208 LGKEIHRYINQE---LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
GK +H ++ + + I+GNALLDMY KC + A F + K+++ W +V+G
Sbjct: 182 FGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAG 241
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
G+LE+AR F + P RDIV W +++ GY F L +M + ++ PD +
Sbjct: 242 CAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTM 301
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
++L++ + GAL+QG+W HG++ +I +DA + +ALI+MY KCG IE+A +F E+ +
Sbjct: 302 ISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINK 361
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
KD WT++I GLA +G +KALELFS+M PDD+TF+ VLSACSH GLVD+G +
Sbjct: 362 KDVTVWTTMITGLAFHGYGSKALELFSEM-QEDVSPDDVTFVSVLSACSHSGLVDQGIKV 420
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
F++MT+ Y I+P +EHYGCL+DLL R+G L EA+++I ++P + + I +GA+L+AC+
Sbjct: 421 FSSMTD-YGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSI---WGAMLNACQ 476
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGC 564
G+V++ E + L ++ ++ +TLL+NIYA++ RW +R+ M+ GV+K GC
Sbjct: 477 AQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTAGC 536
Query: 565 SSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
SS+ ++G++H F+ D H +I S+L+
Sbjct: 537 SSVVVDGVVHNFISADKCHPGWVDISSILN 566
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/589 (36%), Positives = 344/589 (58%), Gaps = 38/589 (6%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G + +LNKL+ + YA +F + +L +N +++AF R++L
Sbjct: 5 GFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQ 64
Query: 75 LFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
++++ ER + PD FT+P + K L E K G+ +HG VVK L D Y+ ++++MY
Sbjct: 65 SYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMY 124
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
G + + + LF+ M ++ V W ISG++K +A+ ++++M + PDE T+
Sbjct: 125 AACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEED-GFSPDEVTM 183
Query: 194 VSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
+ +SAC LK+L +G ++H +I + +++ ++G+AL++MY KC
Sbjct: 184 ATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC--------------- 228
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
G L+ AR +FD+ +D+ W+A+I GYV+ NR EA+ LFRE+
Sbjct: 229 ----------------GDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREV 272
Query: 313 QI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
++P++ ++A+++ CAQLG LE G+W+H YI + + +LI+M++KCG
Sbjct: 273 AGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGD 332
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
I+ A IF + KD SW S++ GLA++G +AL F M + +PD+ITFIGVL+A
Sbjct: 333 IDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTA 392
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
CSH GLV EG++ F + +Y ++ K EHYGC++DLL RAGLL EA E IR +P + +
Sbjct: 393 CSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGA 452
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I +G++L ACR+Y N+++GE+ A L ++E + + LL+NIYA W +V VR+
Sbjct: 453 I---WGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRE 509
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
M E G++K PGCSS+ I+ I H FL GD SH E+ EI ML ++ + L
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKL 558
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/605 (35%), Positives = 326/605 (53%), Gaps = 57/605 (9%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+L QIQAQI GL+ N + C G + A ++F P +N + +
Sbjct: 36 VRLHQIQAQIVTHGLEGNDYVTPSFITACARL--GGIRRARRVFDKTAQPNGATWNAMFR 93
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A+ ++LF+++ G SP+ FT+P V K+ K+GE+VH V K G +
Sbjct: 94 GYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKS 153
Query: 122 DTYVCNSIMDMYGVLGK--ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+T+V +++ MY + G + + K+F EM DK+V +W ++ HV C A +F
Sbjct: 154 NTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLF-- 211
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
+L P V + N ++ Y + G
Sbjct: 212 -----DLAPQRDVV--------------------------------LWNVVVSGYIELGD 234
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ ARELFD MP+++V+ W +++SGY G++E LF+ PVR++ W +I GYV+
Sbjct: 235 MVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRN 294
Query: 300 NRFDEAVALFREMQII-----------RLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
F EA+ F+ M ++ + P+ + +VA+LT C++LG LE GKW+H Y
Sbjct: 295 GLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAE 354
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ V ALI+MYAKCG+IEKAL++F L KD +W +II GLAM+G + AL
Sbjct: 355 SIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALS 414
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +M G +PD +TF+G+LSAC+H GLV G F +M + Y I P++EHYGC++DLL
Sbjct: 415 LFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLL 474
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAGL+D+A +++RK+P E + +I + ALL ACR+Y NV+M E L ++E +
Sbjct: 475 GRAGLIDKAVDIVRKMPMEPDAVI---WAALLGACRMYKNVEMAELALQRLIELEPNNPG 531
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+++NIY R +DV ++ M++ G RKVPGCS I N + EF D H E
Sbjct: 532 NFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSMVEFYSLDERHPETDS 591
Query: 589 IYSML 593
IY L
Sbjct: 592 IYRAL 596
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/605 (36%), Positives = 344/605 (56%), Gaps = 52/605 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAY--NL 58
+ ++++ AQ+ + GL +P +KL+ ++ L + +IF S +P + N
Sbjct: 71 LHHVQELHAQLLKHGLHLDPLAASKLI--SSYALQRRLPASRRIFASFPNPQATTFLPNT 128
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
L++A+A ++ LFS + +R D+FTY F+ KA+ G + VH +VVK G
Sbjct: 129 LLRAYALNALPHAAVSLFSAMPQR----DSFTYSFLIKALSSSG-LTPLRAVHSHVVKLG 183
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
DTYV N+++D Y G + K+F+EMP +D VSWN +++ V+ + V R
Sbjct: 184 SIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVR----QGEVASAR 239
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
RM + MPD+ TV N +LD Y K G
Sbjct: 240 RM---FDEMPDKDTVS--------------------------------WNTVLDGYTKAG 264
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ +A ELF MP +NV+ W+++VSGY G +E AR +FD+ P +++V WT M++ Q
Sbjct: 265 KMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQ 324
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+EA LF +M+ ++ D +V++L CA+ G+L GK IH Y+ ++ V
Sbjct: 325 NGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHV 384
Query: 359 ATALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
A+I+M+ KCG + +A +F E+ EKD+ SW +II G AM+G +KAL+ F+QM G
Sbjct: 385 CNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQG 444
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+PD +T I VLSAC+H G V+EGR+ F+ M Y I P++EHYGC+IDLLGR GL++EA
Sbjct: 445 FRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEA 504
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
LI+ +P + NE+I +G+LLSACR++ NV+ E L K++ ++ + +L+NIY
Sbjct: 505 VGLIKSMPWDPNEVI---WGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIY 561
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
A A +W D+ R +MK G +K G S IE++ HEF VGD HS+ +I M+DR++
Sbjct: 562 AEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRLS 621
Query: 598 KTLLD 602
+ D
Sbjct: 622 SHVKD 626
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/566 (37%), Positives = 329/566 (58%), Gaps = 42/566 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKK-GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
A +F I P A+N++I+ F ++ + ++++ G+ P+NFTYPFVF A
Sbjct: 78 ASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACA 137
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L + G+ H V+K+GL D +V +S++ MY G++ +++FDE+ +KD+VSWN
Sbjct: 138 NLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNS 197
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQ 218
ISG+ + DAV +F MR PDE T+VS L AC L +L LG I ++
Sbjct: 198 MISGYSRMGYAGDAVGLFGEMRDA-GFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVEN 256
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
E++ +G+AL+ MY KC G L AR +F
Sbjct: 257 EMDLNSFVGSALIGMYGKC-------------------------------GDLSSARRVF 285
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
DR +D+V W AMI GY Q DEA+ LF M+ + PDK LV +L+ CA +GAL+
Sbjct: 286 DRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALD 345
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
GKW+ Y +E + D V+TALI+MYAKCG ++ AL +F ++ +K+ SW ++I LA
Sbjct: 346 FGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALA 405
Query: 399 MNGKINKALELFSQMI--SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+G+ ++L LF +M G +P+DI+FIGVLSAC H GLVDEGR+ F+ M+ + + P
Sbjct: 406 FHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVP 465
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
K+EH+ C++DLL RAG + EA + I K+P + +E+++ GALL AC+ NVD+ E++
Sbjct: 466 KIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVL---GALLGACQKRRNVDVSERVM 522
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+L ++E +S + + + I+A+ RW+D +R M++ GV K PGCS IEI +HEF
Sbjct: 523 HMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHEF 582
Query: 577 LVGDPSH---SEMKEIYSMLDRMAKT 599
GD H +M ++ ++L+ K
Sbjct: 583 HAGDVLHFISQDMCQVINLLNEEMKV 608
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 186/353 (52%), Gaps = 34/353 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A ++F I L+++N +I +++ G ++ LF ++R+ G PD T +
Sbjct: 175 GELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSIL 234
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A G LG++ G + G+VV+ ++ +++V ++++ MYG G + + +++FD M KDVV
Sbjct: 235 GACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVV 294
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQ-GCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
+WN I+G+ + ++A+ +F MR+ G N PD+ T+V LSAC ++ L+ GK +
Sbjct: 295 TWNAMITGYAQNGVSDEAIILFSGMRESGVN--PDKITLVGVLSACASIGALDFGKWLDT 352
Query: 215 YINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
Y ++ L+ + AL+DMY KCG L +A +F++MP KN + W +M+S G+ ++
Sbjct: 353 YASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQE 412
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
+ LF R + +E +R P+ + +L+ C
Sbjct: 413 SLSLFKR---------------------------MSKEGGAVR--PNDISFIGVLSACVH 443
Query: 334 LGALEQGKWIHGYINENRITVDAVV-ATALIEMYAKCGLIEKALEIFYELREK 385
G +++G+ + ++ + V + + ++++ A+ G + +A + ++ EK
Sbjct: 444 AGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEK 496
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 170/410 (41%), Gaps = 54/410 (13%)
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ + LL + +C +++ +M + ++ +++ A LF + P +
Sbjct: 30 LTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPN 89
Query: 286 IVLWTAMINGYVQ-FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ MI G + +F+ + + +M+ ++P+ F + CA L L G+ H
Sbjct: 90 EYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAH 149
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ ++ + D V +LI MY++CG + A +F E+ EKD SW S+I G + G
Sbjct: 150 SGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAG 209
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--- 461
A+ LF +M G +PD++T + +L AC G L D G + E + ++ +++
Sbjct: 210 DAVGLFGEMRDAGFEPDEMTLVSILGAC--GDLGDLG---LGSWIEGFVVENEMDLNSFV 264
Query: 462 -GCLIDLLGRAGLLDEAEELIRKIPNEN-----------------NEIIVPLYG------ 497
LI + G+ G L A + ++ ++ +E I+ G
Sbjct: 265 GSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGV 324
Query: 498 --------ALLSACRIYGNVDMGEKLAALL-EKIESKDSSFHTLLANIYASANRWEDVTN 548
+LSAC G +D G+ L E+ D T L ++YA +D
Sbjct: 325 NPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALR 384
Query: 549 VRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
V + M P + + N +I H +E S+ RM+K
Sbjct: 385 VFEDM--------PQKNEVSWNAMISALAF----HGRPQESLSLFKRMSK 422
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/597 (36%), Positives = 341/597 (57%), Gaps = 18/597 (3%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFC--THPSHGNLLYAEKIF-GSIQSPCLLAYNLL 59
KQI AQI +I L +++L++F THP NL A +F P L YN +
Sbjct: 46 HFKQILAQIMRINLIGQTFPMSRLILFSAITHPE--NLDMAVLLFRHHTPHPNLYIYNTM 103
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I A + S +S ++ L + P+ T+ F+ +A +L +V + +H + + TG
Sbjct: 104 ISALSL--SLNQSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQ---IHCHAIITGS 158
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ Y+ N++M +Y K+ ++F +M D VS+N+ I G+ K +A+
Sbjct: 159 FYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHE 218
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP---IMGNALLDMYCK 236
M G L PDE T++ L C L + +LGK +H +I + I+ NALLDMY K
Sbjct: 219 M-VGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVK 277
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C L A+ +F+ + K+ I W +M++GY G LE A + F+ P RD+V W ++I GY
Sbjct: 278 CKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGY 337
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q LF M + PD ++ L++ A++GAL G+WIHG++ ++ +DA
Sbjct: 338 AQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDA 397
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ +A I+MY KCG I++A +F E+ EKD WT++I G A +G +KAL+LF +M
Sbjct: 398 FLGSAFIDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEM-QE 456
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
P+ +TF+ VL+ACSH G V +G R FN+M E Y I+P +EHYGCL+DLLGR+G E
Sbjct: 457 YVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSE 516
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
+++I +P + + I +GA+LSACR YGN+++ E L K+E + + LL+NI
Sbjct: 517 VKDVIEMMPMKPSRSI---WGAVLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNI 573
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
YA++ RW+ +R+ M+ GV+K GCSS+ ++GIIHEF+ D H EI S+L
Sbjct: 574 YATSGRWKHSDKIREIMESRGVKKTAGCSSVVVDGIIHEFVAADKRHPRWIEIQSIL 630
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 327/553 (59%), Gaps = 50/553 (9%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N L+ +A + + L++ ++ + G PD FT+P V K+ + +G +VHG ++
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K G + YV NS++ Y V + + ++FDEM +DVVSW ISG+V+ F++AV
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG------NA 229
+F RM ++ P+ T VS L AC L +GK IH L F G NA
Sbjct: 122 LFLRM----DVEPNAATFVSVLVACGRKGYLSVGKGIH-----GLSFKSAFGVGLEVSNA 172
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
L+DMY V CG L A+ +FD +DIV W
Sbjct: 173 LMDMY-------------------------------VKCGCLPGAKQVFDELAEKDIVSW 201
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
T++I+G VQ N EA+ LF++MQ ++PD IL ++L+ CA+LGAL+ G+W+H +I+
Sbjct: 202 TSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDR 261
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
I D + TA+++MYAKCG IE +++IF + K+ +W +++ GLAM+G K LEL
Sbjct: 262 KAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLEL 321
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT-EVYQIQPKLEHYGCLIDLL 468
F +M+ G +P+++TF+ +L+AC H GLV+EGR++FN M + Y + P+LEHYGC++DLL
Sbjct: 322 FEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLL 381
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
RA LLDEA EL + +P + V + GALLSAC+ GN ++ +++ +++S DS
Sbjct: 382 CRARLLDEALELTKAMPMSPD---VRIMGALLSACKENGNTELPQEILDRFVELDSHDSG 438
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+ LL+NI+A RW+DVT +R+ MKE G++K PG + IE++G HEF+VGD H + K
Sbjct: 439 VYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELDGKAHEFIVGDTRHPQDKR 498
Query: 589 IYSMLDRMAKTLL 601
I +L ++ +
Sbjct: 499 IRLLLKILSDQIF 511
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 146/309 (47%), Gaps = 14/309 (4%)
Query: 12 FQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRK 71
F +GL+ + L + V C G L A+++F + ++++ +I + ++
Sbjct: 163 FGVGLEVS-NALMDMYVKC-----GCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKE 216
Query: 72 SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMD 131
+L LF ++ G+ PD V A LG + G VH ++ + +++D + +++D
Sbjct: 217 ALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVD 276
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
MY G I ++F+ MP K+V++WN ++G +++F M + + P+E
Sbjct: 277 MYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVR-VGMRPNEV 335
Query: 192 TVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGN--ALLDMYCKCGCLSEARELFD 248
T ++ L+AC + G++ ++ Q+ P + + ++D+ C+ L EA EL
Sbjct: 336 TFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTK 395
Query: 249 EMP-NKNVICWTSMVSGYVNCGQLEKARDLFDRS---PVRDIVLWTAMINGYVQFNRFDE 304
MP + +V +++S G E +++ DR D ++ + N + R+D+
Sbjct: 396 AMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDD 455
Query: 305 AVALFREMQ 313
+ R M+
Sbjct: 456 VTRIRRLMK 464
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/599 (37%), Positives = 332/599 (55%), Gaps = 71/599 (11%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAY--NLL 59
++++ AQ+ + GL NP +L+ + L + ++F +I+ P A+ N +
Sbjct: 366 AHVRELHAQVLKQGLHLNPRAAARLV--SAYALLRLLPSSRRVFDAIRDPHADAFLANTM 423
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
++A+A G+ R +L FS + R D+FTY F+ KA+ G V VH +VVK G
Sbjct: 424 LRAYALGGAPRDALAAFSAMPRR----DSFTYSFLIKALSAAG-VAPVRAVHSHVVKLGS 478
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
DT+V N+++D Y G + +K+FDEMP++DVVSWN +++ V+ A +F
Sbjct: 479 VEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLF-- 536
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
+ MP++ TV N +LD Y K G
Sbjct: 537 -----DEMPEKDTV--------------------------------SWNTILDGYTKAGE 559
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A ELF MP +NV+ W++MVSGY G LE AR +FD+ P +++V WT M
Sbjct: 560 VEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIM------- 612
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
M+ ++ D +V++L CA+ G+L GK IH Y+ + + V
Sbjct: 613 ------------MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVC 660
Query: 360 TALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI+M+ KCG + +A +F E +KD+ SW SII G AM+G +KALELF+QM G
Sbjct: 661 NALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGF 720
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD +T I VLSAC+H G VDEGRR+F+ M Y I P++EHYGC+IDLLGR GL+ EA
Sbjct: 721 NPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAV 780
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
+LI+ +P E NE+I +G+LLSACR++ NV+ E L K++ ++ + +L+NIYA
Sbjct: 781 DLIKSMPWEPNEVI---WGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYA 837
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
A +W D+ R +MK G +K G S +E+N HEF VGD H + +I M+DR++
Sbjct: 838 EAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLS 896
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/517 (39%), Positives = 318/517 (61%), Gaps = 11/517 (2%)
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGL--EFDTYVCNSIMDMYGVLGKICNVKKLFD 147
T+ F+ + G L ++K+ +HG V GL ++ +++ Y LG + +K+F+
Sbjct: 5 TFYFLLQKCGSLEKLKQ---IHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFN 61
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+ + D+VSW IS ++ + A +F + L PD VV +SAC K+L
Sbjct: 62 HIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHS-GLRPDSFCVVGAVSACGHRKDLS 120
Query: 208 LGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
G+ +H + + EL PI+GNAL+DMY + G + A +F M K+V WTS+++G++
Sbjct: 121 NGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFI 180
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILV 325
C +E AR +FD P+R+ V WTAMI GYVQ + LF+EM+ + P +V
Sbjct: 181 KCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIV 240
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
A+L+GCA +GA + G +HGY+N+ + +D V AL++MYAK G + AL+IF E+ ++
Sbjct: 241 AVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKR 300
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D SWT++I GLA++GK ALE FS M G P+++T + VLSACSH GLV EGR F
Sbjct: 301 DVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLF 360
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
M + + I+PK++HYGC++DLLGRAGLL EA+ELI +P + + +I + +LLSAC +
Sbjct: 361 QKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVI---WRSLLSACLV 417
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+GN+ + E ++ ++E D + LL NIY SA+RWED R+ M++ V+K PGCS
Sbjct: 418 HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCS 477
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
+E+NG++HEFL D H ++Y++L+ + + + D
Sbjct: 478 WVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMKD 514
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 205/460 (44%), Gaps = 66/460 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LKQI + +GL + + T+ G+ + A+K+F IQ+P ++++ LI
Sbjct: 16 LEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLI 75
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ K+ +FS L G+ PD+F A G ++ G VHG V + L
Sbjct: 76 SLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELG 135
Query: 121 FDTYVCNSIMDMYGVLGKI---------------------------CN----VKKLFDEM 149
D V N+++DMY G I CN +++FDEM
Sbjct: 136 SDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEM 195
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P ++ VSW I+G+V+ +++F+ MR P T+V+ LS C + +LG
Sbjct: 196 PMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLG 255
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+H Y+N+ L+ + NAL+DMY K G L A ++F EMP ++V WT+M+SG
Sbjct: 256 SSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALH 315
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G + A+ F +M + P++ L+++L
Sbjct: 316 G-------------------------------KGTHALEAFSDMSKSGVVPNEVTLLSVL 344
Query: 329 TGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-D 386
+ C+ G + +G+ + + + I ++++ + GL+ +A E+ + K D
Sbjct: 345 SACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPD 404
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
+ W S++ ++G + A E+ +MI DD +I
Sbjct: 405 SVIWRSLLSACLVHGNLALA-EMAGKMIIELEPDDDGVYI 443
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/500 (39%), Positives = 309/500 (61%), Gaps = 17/500 (3%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
++HG ++KTGL D + ++ G + + +FD + + WN I G+
Sbjct: 36 QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYI-----NQEL 220
E+A+ ++ M + +P T L AC+++ LE ++IH +I E+
Sbjct: 96 SKEPEEALLLYHHMLY--HSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEI 153
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
T N+LL++Y K G + AR LFD++ ++ + W SM+ GY CG++E A ++F+
Sbjct: 154 YTT----NSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNH 209
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P R+I+ WT+MI+G V + EA+ LF MQ +K D LV+ L CA LG L+QG
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
KWIH YI ++ I +D ++ LI+MYAKCG +E+A+E+F ++ EK + WT++I G A++
Sbjct: 270 KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIH 329
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ +ALE F +M + G +P+ +TF G+L+ACSH GLV E + F +M ++ +P +EH
Sbjct: 330 GRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEH 389
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC++DLLGRAGLL EAEELI +P + N I +GALL+AC I+GN+++G+++ +L
Sbjct: 390 YGCMVDLLGRAGLLKEAEELIENMPVKPNAAI---WGALLNACHIHGNLELGKQIGKILI 446
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+++ + LA+I+A+A W VR++MKE GV K+PGCS I +NG HEFL GD
Sbjct: 447 QVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGD 506
Query: 581 PSHSEMKEIYSMLDRMAKTL 600
SH ++KEI ML+++ + L
Sbjct: 507 ESHPQIKEIDHMLEQIVERL 526
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 216/442 (48%), Gaps = 76/442 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +L+QI Q+ + GL + +KL+ FC P+ G+L YA +F I P +N +I
Sbjct: 31 MEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ ++LLL+ + V + +T+PF+ KA + +++ +++H +++K G
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFG 150
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ Y NS++++Y G I + + LFD++ +D VSWN I G+ KC E A ++F M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 181 RQ-----------GC----------NLMP---------DEGTVVSTLSACTALKNLELGK 210
+ GC NL D +VSTL AC L L+ GK
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 270
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH YI + E+E PI+G L+DMY KCG L EA E+F +M K V WT+M+SGY
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA--- 327
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
I+G R EA+ F +MQ ++P++ +LT
Sbjct: 328 -----------------------IHG-----RGREALEWFMKMQTAGVEPNQMTFTGILT 359
Query: 330 GCAQLGALEQGKW-------IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
C+ G + + K IHG+ + +++ ++++ + GL+++A E+ +
Sbjct: 360 ACSHAGLVHEAKLLFESMERIHGF----KPSIEHY--GCMVDLLGRAGLLKEAEELIENM 413
Query: 383 REK-DAASWTSIICGLAMNGKI 403
K +AA W +++ ++G +
Sbjct: 414 PVKPNAAIWGALLNACHIHGNL 435
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/567 (37%), Positives = 338/567 (59%), Gaps = 46/567 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L+Q+ A I GL+Q+ L L + H L YA +F + +P + +N LIK+
Sbjct: 44 HLEQVHACIIHRGLEQD-HFLVFLFISRAHTLLSTLSYASSVFHRVLAPSTVLWNTLIKS 102
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+K F +L F++++ G PD+FTYP V KA + ++G+ +HG + G++ D
Sbjct: 103 HCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSGTCKAREGKSLHGSAFRCGVDQD 162
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
YV S++DMYG G+I + +K+FD M D++VVSW + G+V +A +F M
Sbjct: 163 LYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMP- 221
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
HR + N++L + K G LS
Sbjct: 222 ------------------------------HRNVAS--------WNSMLQGFVKMGDLSG 243
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
AR +FD MP KNV+ +T+M+ GY G + AR LFD S +D+V W+A+I+GYVQ
Sbjct: 244 ARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLP 303
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV--DAVVAT 360
++A+ +F EM+++ +KPD+FILV+L++ AQLG LE +W+ Y+++ I + D V+A
Sbjct: 304 NQALRVFLEMELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVIA- 362
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL++M AKCG +E+AL++F E +D + S+I GL+++G+ +A+ LF++M+ G P
Sbjct: 363 ALLDMNAKCGNMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTP 422
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D++ F +L+ACS GLVDEGR +F +M + Y I P +HY C++DLL R+G + +A EL
Sbjct: 423 DEVAFTVILTACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYEL 482
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+ IP E + +GALL AC++YG+ ++GE +A L ++E +++ + LL++IYA+A
Sbjct: 483 IKLIPWEPH---AGAWGALLGACKLYGDSELGEIVANRLFELEPLNAANYVLLSDIYAAA 539
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSI 567
RW DV+ VR KM+E VRK+PG S I
Sbjct: 540 ERWIDVSLVRSKMRERRVRKIPGSSKI 566
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/554 (37%), Positives = 327/554 (59%), Gaps = 12/554 (2%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
++N +I FA+ F ++L F ++ +++++ A L ++K G ++HG +
Sbjct: 123 SWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLI 182
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
K+ D ++ + ++D Y G + +++FD M +K+VVSWN I+ + + +A+
Sbjct: 183 SKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEAL 242
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLD 232
+ F RM + PDE T+ S +SAC L + G +IH + + +F I+GNAL+D
Sbjct: 243 EAFGRMTE-LGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVD 301
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY KCG ++EAR +FD MP +N + T+MVSGY ++ AR +F +DIV W A+
Sbjct: 302 MYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNAL 361
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I GY Q +EA+ LFR ++ + P + LL A L LE G+ H ++ ++
Sbjct: 362 IAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGF 421
Query: 353 TV------DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
D V +LI+MY KCG +E+ L +F + EKD SW ++I G A NG +A
Sbjct: 422 RFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEA 481
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
LELF +M+ G KPD +T IG L ACSH GLV+EGRR+F +MT+ + + P +HY C++D
Sbjct: 482 LELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVD 541
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LLGRAG L+EA++LI +P + + ++ + +LLSAC+++ N+ +G+ +A + +I+
Sbjct: 542 LLGRAGCLEEAKDLIESMPKQPDAVV---WSSLLSACKVHRNITLGKYVAEKIFEIDPTS 598
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
S + LLAN+Y+ RW D +VR+ M+ GV K PGCS I+I +H F+V D H +
Sbjct: 599 SGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQK 658
Query: 587 KEIYSMLDRMAKTL 600
KEIYS+L + K +
Sbjct: 659 KEIYSILKLLTKHM 672
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 159/309 (51%), Gaps = 11/309 (3%)
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
D L C L++ + +H R I + N L+D+Y KCG L AR
Sbjct: 20 FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
++FD M +NV + S++S + G ++++ LF P +D W +MI G+ Q +RF+E
Sbjct: 80 KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139
Query: 305 AVALFREMQIIRLKPDKFILV-----ALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
A+ F +R+ D F+L + L+ C++L L+ G IHG I++++ ++D +
Sbjct: 140 ALDWF-----VRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMG 194
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+ LI+ Y+KCGL+ A +F + EK+ SW +I NG +ALE F +M G K
Sbjct: 195 SGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFK 254
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD++T V+SAC+ EG + + + + + L L+D+ + G ++EA
Sbjct: 255 PDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARC 314
Query: 480 LIRKIPNEN 488
+ ++P N
Sbjct: 315 VFDRMPVRN 323
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 205/466 (43%), Gaps = 105/466 (22%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM----------- 149
L + VHG +++T + ++ N ++D+YG G + +K+FD M
Sbjct: 37 LRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSI 96
Query: 150 --------------------PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
P+KD SWN I+G + RFE+A+D F RM + + + +
Sbjct: 97 ISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRD-DFVLN 155
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFD 248
+ + S LSAC+ LK+L+LG +IH I++ + MG+ L+D Y KCG + AR +FD
Sbjct: 156 DYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFD 215
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
M KNV+ W NC +I Y Q EA+
Sbjct: 216 GMEEKNVVSW--------NC-----------------------LITCYEQNGPAIEALEA 244
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYA 367
F M + KPD+ L ++++ CA L A ++G IH + ++ D ++ AL++MYA
Sbjct: 245 FGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYA 304
Query: 368 KCGLIEK-------------------------------ALEIFYELREKDAASWTSIICG 396
KCG + + A +F +++KD SW ++I G
Sbjct: 305 KCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAG 364
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF-NTMTEVYQIQ 455
NG+ +AL LF + P TF +L+A ++ ++ GR+ + + ++ Q
Sbjct: 365 YTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQ 424
Query: 456 ----PKLEHYGCLIDLLGRAGLLDEA----EELIRKIPNENNEIIV 493
P + LID+ + G ++E E ++ K N +I+
Sbjct: 425 SGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMII 470
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 182/405 (44%), Gaps = 73/405 (18%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F ++ ++++N LI + + G ++L F ++ E G PD T V A
Sbjct: 210 ARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACAT 269
Query: 101 LGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP--------- 150
L K+G ++H VVK+ D + N+++DMY G++ + +FD MP
Sbjct: 270 LAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETT 329
Query: 151 ----------------------DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
KD+VSWN I+G+ + E+A+ +FR +++ ++ P
Sbjct: 330 MVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRE-SVCP 388
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP------IMGNALLDMYCKCGCLS 241
T + L+A L +LELG++ H + + F +GN+L+DMY KCG +
Sbjct: 389 THYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVE 448
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
E +F+ M K+ + W +M+ GY NGY
Sbjct: 449 EGLRVFENMVEKDHVSWNTMIIGYAQ--------------------------NGYGM--- 479
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVAT 360
EA+ LF++M KPD ++ L C+ G +E+G ++ E+ + T
Sbjct: 480 --EALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYT 537
Query: 361 ALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKIN 404
++++ + G +E+A ++ + ++ DA W+S++ ++ I
Sbjct: 538 CMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNIT 582
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 150/287 (52%), Gaps = 17/287 (5%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F +I+ ++++N LI + + G ++L LF L+ V P ++T+ + A
Sbjct: 343 ARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASAN 402
Query: 101 LGEVKKGEKVHGYVVKTGLEF------DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
L +++ G + H +VVK G F D +V NS++DMY G + ++F+ M +KD
Sbjct: 403 LADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDH 462
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSWN I G+ + +A+++F++M + PD T++ TL AC+ +E G+
Sbjct: 463 VSWNTMIIGYAQNGYGMEALELFQKMLESGE-KPDHVTMIGTLCACSHAGLVEEGRRYFF 521
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG-----YV 266
+ +E P+ + ++D+ + GCL EA++L + MP + + + W+S++S +
Sbjct: 522 SMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNI 581
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
G+ A +F+ P + + N Y + R+ +AV++ + M+
Sbjct: 582 TLGKY-VAEKIFEIDPTSSGP-YVLLANMYSELGRWGDAVSVRKLMR 626
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/668 (32%), Positives = 357/668 (53%), Gaps = 78/668 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+T+ K+I + + L+KL + S ++ A ++F I +P ++ +N +I
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRL--YLSCNQVVLARRLFDEIPNPSVILWNQII 81
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+A G F ++ L+ + GV P+ +TYPFV KA L ++ G ++H + GLE
Sbjct: 82 RAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE 141
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +VC +++D Y G + ++LF M +DVV+WN I+G +DAV + +M
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQM 201
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
++ + P+ T+V L K L GK +H Y + + + ++G LLDMY KC C
Sbjct: 202 QEE-GICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQC 260
Query: 240 L-------------------------------SEARELFDEMPNKNVI------------ 256
L EA ELFD+M K+ +
Sbjct: 261 LLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLR 320
Query: 257 ---------------CW-------------TSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
C+ +++S Y CG ++ A FD +D V
Sbjct: 321 ACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVS 380
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
++A+++G VQ A+++FR MQ+ + PD ++ +L C+ L AL+ G HGY+
Sbjct: 381 FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 440
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
D ++ ALI+MY+KCG I A E+F + D SW ++I G ++G +AL
Sbjct: 441 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALG 500
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +++ G KPDDITFI +LS+CSH GLV EGR +F+ M+ + I P++EH C++D+L
Sbjct: 501 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDIL 560
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAGL+DEA IR +P E + V ++ ALLSACRI+ N+++GE+++ ++ + + +
Sbjct: 561 GRAGLIDEAHHFIRNMPFEPD---VRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTG 617
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
LL+NIY++A RW+D ++R K+ G++K+PGCS IEINGI+H F+ GD SH ++ +
Sbjct: 618 NFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQ 677
Query: 589 IYSMLDRM 596
I L+ +
Sbjct: 678 INRKLEEL 685
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LL C Q +L + K IH + +N D+ V L +Y C + A +F E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
W II A NG + A++L+ M+ G +P+ T+ VL ACS G L E +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDGVEIH 132
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+ +++ ++ + L+D + G+L EA+ L + + + V + A+++ C +Y
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD----VVAWNAMIAGCSLY 188
Query: 507 GNVD 510
G D
Sbjct: 189 GLCD 192
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 328/582 (56%), Gaps = 43/582 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQS-PCLLAYNLLIKA 62
L+Q+ Q+ P N L+ H N Y+ +F I P A+N++I+A
Sbjct: 40 LQQVHTQMVVNSSIHTPN--NHLLSKAIHLK--NFPYSSLLFSHIAPHPNDYAFNIMIRA 95
Query: 63 FAKK-GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
++ +L LF ++ ++PDNFT+PF F + L + H + K L
Sbjct: 96 LTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHS 155
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D + +S++ Y G + + +K+FDE+P +D VSWN I+G+ K +AV+VFR M
Sbjct: 156 DPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMG 215
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+ PDE ++VS L AC L +LELG+ + ++ + + +G+AL+ MY K
Sbjct: 216 RRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAK---- 271
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
CG+LE AR +FD RD++ W A+I+GY Q
Sbjct: 272 ---------------------------CGELESARRIFDGMAARDVITWNAVISGYAQNG 304
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
DEA+ LF M+ + +K L A+L+ CA +GAL+ GK I Y ++ D VAT
Sbjct: 305 MADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVAT 364
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI--SGGA 418
ALI+MYAK G ++ A +F ++ +K+ ASW ++I LA +GK +AL LF M GGA
Sbjct: 365 ALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGA 424
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+DITF+G+LSAC H GLVDEG R F+ M+ ++ + PK+EHY C++DLL RAG L EA
Sbjct: 425 RPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAW 484
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
+LIRK+P + +++ + GALL ACR NVD+GE++ ++ +++ +S + + + IYA
Sbjct: 485 DLIRKMPEKPDKVTL---GALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYA 541
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+ N WED +R M++ G+ K PGCS IE+ +HEF GD
Sbjct: 542 NLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGD 583
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/667 (35%), Positives = 357/667 (53%), Gaps = 78/667 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA-YNLL 59
+ Q K I +IF G Q N L+ F + S + AE +F + P ++ +N L
Sbjct: 19 LKQGKLIHQRIFSCGFQSNIVLSKSLIGF--YFSCHDYASAELVFQTNDCPLDVSLWNAL 76
Query: 60 IKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ A+ F ++L LF +L V PD +TYP V KA G LG V G ++H +++KTG
Sbjct: 77 LSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTG 136
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
L +D +V +S+M+MY + + KLFDE P +DV WN IS + K + E A+ F
Sbjct: 137 LIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFD 196
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKC 237
+M++ P+ T +S+CT L NLE GKE+HR I + + + +AL+DMY KC
Sbjct: 197 KMKE-LGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKC 255
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR----------------- 280
GCL A+E+F+++P KN I W +M++GY G +L R
Sbjct: 256 GCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSII 315
Query: 281 -SPVRDIVLWTA-MINGYVQFNRFD--------------------EAVALFR-------- 310
+ R + L I+GY+ NR D A +FR
Sbjct: 316 YASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVV 375
Query: 311 -----------------------EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
M+ +KPD + L+ C+QL AL++G+ +H I
Sbjct: 376 SWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCI 435
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+++ + +V AL++MYAKCG +++A ++F++L ++D SWTS+I +G+ ++AL
Sbjct: 436 INHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEAL 495
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LF +M + D +TF+ VLSACSH GLVDEG +FN M Y I+P +EHY CLIDL
Sbjct: 496 RLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDL 555
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG L EA E++++ ++I L L SAC ++ N +G ++ +L +++ D
Sbjct: 556 LGRAGRLHEAYEILQRSKETRSDI--GLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDP 613
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
S + LL+N+YAS N+W++V VR+KMKE+G++K PGCS IEIN IH F D S+
Sbjct: 614 STYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLAD 673
Query: 588 EIYSMLD 594
+Y L+
Sbjct: 674 GVYECLN 680
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 178/403 (44%), Gaps = 83/403 (20%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIHR--------------------------YINQELEF 222
D T++S L CT+ K L+ GK IH+ Y + EL F
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 223 T----PI---MGNALLDMYCKCGCLSEARELFDEM-------PN---------------- 252
P+ + NALL Y EA +LFD++ P+
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 253 ------------KNVICW-----TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K + W +S+++ Y C Q A LFD P RD+ W A+I+
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Y + + + A+ F +M+ + +P+ +++ C +L LE+GK +H + E RI +D
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD 241
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
A V +AL++MY KCG +E A E+F ++ K+A +W ++I G ++ G +EL +M
Sbjct: 242 AFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND 301
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G KP +T ++ A S + G +F + +I + LID + G +
Sbjct: 302 EGTKPTLMTLTSIIYASSRSVQLRHG-KFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
AE + R I NE++ + ++S G+V +G + AL
Sbjct: 361 SAETIFRTI--SKNEVVS--WNVMIS-----GHVMVGNHIQAL 394
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/668 (32%), Positives = 357/668 (53%), Gaps = 78/668 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+T+ K+I + + L+KL + S ++ A ++F I +P ++ +N +I
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRL--YLSCNQVVLARRLFDEIPNPSVILWNQII 81
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+A G F ++ L+ + GV P+ +TYPFV KA L ++ G ++H + GLE
Sbjct: 82 RAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE 141
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +VC +++D Y G + ++LF M +DVV+WN I+G +DAV + +M
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQM 201
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
++ + P+ T+V L K L GK +H Y + + + ++G LLDMY KC C
Sbjct: 202 QEE-GICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQC 260
Query: 240 L-------------------------------SEARELFDEMPNKNVI------------ 256
L EA ELFD+M K+ +
Sbjct: 261 LLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLR 320
Query: 257 ---------------CW-------------TSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
C+ +++S Y CG ++ A FD +D V
Sbjct: 321 ACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVS 380
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
++A+++G VQ A+++FR MQ+ + PD ++ +L C+ L AL+ G HGY+
Sbjct: 381 FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 440
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
D ++ ALI+MY+KCG I A E+F + D SW ++I G ++G +AL
Sbjct: 441 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALG 500
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +++ G KPDDITFI +LS+CSH GLV EGR +F+ M+ + I P++EH C++D+L
Sbjct: 501 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDIL 560
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAGL+DEA IR +P E + V ++ ALLSACRI+ N+++GE+++ ++ + + +
Sbjct: 561 GRAGLIDEAHHFIRNMPFEPD---VRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTG 617
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
LL+NIY++A RW+D ++R K+ G++K+PGCS IEINGI+H F+ GD SH ++ +
Sbjct: 618 NFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQ 677
Query: 589 IYSMLDRM 596
I L+ +
Sbjct: 678 INRKLEEL 685
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LL C Q +L + K IH + +N D+ V L +Y C + A +F E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
W II A NG + A++L+ M+ G +P+ T+ VL ACS G L E +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDGVEIH 132
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+ +++ ++ + L+D + G+L EA+ L + + + V + A+++ C +Y
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD----VVAWNAMIAGCSLY 188
Query: 507 GNVD 510
G D
Sbjct: 189 GLCD 192
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/605 (35%), Positives = 345/605 (57%), Gaps = 45/605 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q +++ A I + G+Q N N L+ + G+L A ++F SI+ ++++ +I
Sbjct: 63 LEQGREVHAAILKSGIQPNRYLENTLLSM--YAKCGSLTDARRVFDSIRDRNIVSWTAMI 120
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AF ++ + ++ G PD T+ + A ++ G+KVH +V+ GLE
Sbjct: 121 EAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLE 180
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ V S++ MY G I + +FD +P+K+VV+W + I+G+ + + + A+++ M
Sbjct: 181 LEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETM 240
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGC 239
+Q + P++ T S L CT LE GK++HRYI Q + + N+L+ MYCKCG
Sbjct: 241 QQA-EVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGG 299
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L EAR+LF ++P+++V+ WT+MV+GY Q
Sbjct: 300 LEEARKLFSDLPHRDVVTWTAMVTGY-------------------------------AQL 328
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
DEA+ LFR MQ +KPDK ++LT C+ L++GK IH + +D +
Sbjct: 329 GFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ 388
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG-LAMNGKINKALELFSQMISGGA 418
+AL+ MYAKCG ++ A +F ++ E++ +WT+II G A +G+ +ALE F QM G
Sbjct: 389 SALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGI 448
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD +TF VLSAC+H GLV+EGR+ F +M Y I+P +EHY C +DLLGRAG L+EAE
Sbjct: 449 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 508
Query: 479 ELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+I +P +P ++GALLSACR++ +V+ GE+ A + K++ D + L++
Sbjct: 509 NVILSMP------FIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSS 562
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYA+A R+ED VRQ M++ V K PG S IE++G +H F V D SH E ++IY L +
Sbjct: 563 IYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGK 622
Query: 596 MAKTL 600
+ + +
Sbjct: 623 LTEQI 627
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 11/226 (4%)
Query: 301 RFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
R EA+ + M Q R+ D F LL CA+L +LEQG+ +H I ++ I + +
Sbjct: 27 RLKEALGIMNTMILQGTRVYSDVF--RGLLQECARLRSLEQGREVHAAILKSGIQPNRYL 84
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
L+ MYAKCG + A +F +R+++ SWT++I K +A + + M G
Sbjct: 85 ENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGC 144
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEA 477
KPD +TF+ +L+A ++ L+ G++ + E +++P++ L+ + + G + +A
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCGDISKA 202
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
+ ++P +N V + L++ G VD+ +L +++ E
Sbjct: 203 RVIFDRLPEKN----VVTWTLLIAGYAQQGQVDVALELLETMQQAE 244
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/592 (35%), Positives = 342/592 (57%), Gaps = 14/592 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F Q+N + N ++ T G L A +F + ++N ++ FA++ F
Sbjct: 75 KVFDHMQQRNTFSWNAVLGALT--KFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRF 132
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
++L + + +++ A L ++ G ++HG + K+ D Y+ +++
Sbjct: 133 EEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSAL 192
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY + + ++ FD+M +++VSWN I+ + + A++VF RM C + PD
Sbjct: 193 VDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRM-MNCGIEPD 251
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELF 247
E T+ S SAC +L + G +IH + + ++ ++GNAL+DMY KC ++EAR +F
Sbjct: 252 EITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVF 311
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D MP ++V+ TSMVSGY ++ AR +F R++V W A+I GY Q +EAV
Sbjct: 312 DRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVR 371
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI------TVDAVVATA 361
LF ++ + P + LL CA L L+ G+ H +I ++ D V +
Sbjct: 372 LFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNS 431
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MY KCGL+E +F + E+D SW ++I G A NG +ALE+F +M+ G +PD
Sbjct: 432 LIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPD 491
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+T IGVLSACSH GLV+EGR +F +MT + + P +HY C++DLLGRAG LDEA LI
Sbjct: 492 HVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLI 551
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+ +P E + ++ +G+LL+AC+++GN+ +G+ +A L +I+ +S + LL+N+YA
Sbjct: 552 QTMPMEPDAVV---WGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELG 608
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
RW+DV VR++M++MGV K PGCS I I +H F+V D H K+IY +L
Sbjct: 609 RWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLIL 660
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 156/298 (52%), Gaps = 1/298 (0%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
D L C K++ + +H R I + + N L+D+Y KCG L +AR++F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D M +N W +++ G L++A +LF P RD W AM++G+ Q +RF+EA+
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
+M +++ + L+ CA L L G IHG I ++R ++D + +AL++MY+
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KC ++ A F ++ ++ SW S+I NG KALE+F +M++ G +PD+IT
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
V SAC+ + EG + + + + + L L+D+ + ++EA + ++P
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 180/390 (46%), Gaps = 70/390 (17%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE--------------------- 148
VH ++KT + ++ N ++D+YG G + + +K+FD
Sbjct: 41 VHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGA 100
Query: 149 ----------MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
MP++D SWN +SG + RFE+A+ M + + +E + S LS
Sbjct: 101 LDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSE-DFVLNEYSFGSALS 159
Query: 199 ACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC L +L +G +IH I + MG+AL+DMY KC ++ A+ FD+M +N++
Sbjct: 160 ACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVS 219
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W S+++ Y G KA ++F R M+N ++
Sbjct: 220 WNSLITCYEQNGPAGKALEVFVR-----------MMNCGIE------------------- 249
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKAL 376
PD+ L ++ + CA L A+ +G IH + ++ D V+ AL++MYAKC + +A
Sbjct: 250 -PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEAR 308
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F + +D S TS++ G A + A +FS M+ + + +++ +++ + G
Sbjct: 309 LVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMM----ERNVVSWNALIAGYTQNG 364
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
+E R F + + I P +G L++
Sbjct: 365 ENEEAVRLF-LLLKRESIWPTHYTFGNLLN 393
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/564 (36%), Positives = 327/564 (57%), Gaps = 43/564 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F I P +N + + +++ S + ++LF +++ V P+ FT+P + K+
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ +K+GE+VH +V+K+G + +V +++DMY G I ++F EM +++V++W
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAM 123
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I+G++ C C+L+ TA + +L E R I
Sbjct: 124 INGYITC----------------CDLV-------------TARRLFDLAPE--RDI---- 148
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
++ N ++ Y + + ARELFD+MPNK+V+ W ++++GY + G + LF+
Sbjct: 149 ----VLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEE 204
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLGALEQ 339
P R++ W A+I GY + F E ++ F+ M + + P+ LV +L+ CA+LGAL+
Sbjct: 205 MPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDL 264
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GKW+H Y + + V AL++MYAKCG++E AL++F + KD SW +II GLA+
Sbjct: 265 GKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAV 324
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G AL LFS M G PD ITFIG+L AC+H GLV++G +F +MT+ Y I P++E
Sbjct: 325 HGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIE 384
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGC++DLLGRAGLL A + IRK+P E + +I + ALL ACR+Y NV++ E L
Sbjct: 385 HYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVI---WAALLGACRVYKNVELAELALEKL 441
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+ E K+ + + +L+NIY RW+DV ++ M++ G +K+PGCS IE+N + EF
Sbjct: 442 IEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSL 501
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDS 603
D H E ++IY L + K L S
Sbjct: 502 DERHPEKEQIYGTLRTLTKLLRSS 525
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 43/350 (12%)
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
N K+FD++P+ + WN G+ + +D + +FR+M+ G ++MP+ T L +C
Sbjct: 3 NAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMK-GLDVMPNCFTFPVILKSC 61
Query: 201 TALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
+ L+ G+E+H + I P + L+DMY G + A +F EM +NVI WT
Sbjct: 62 VKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWT 121
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
+M++GY+ C L AR LFD +P RDIVLW MI+GY++ A LF +M P
Sbjct: 122 AMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKM------P 175
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+K D + ++ YA G + +F
Sbjct: 176 NK---------------------------------DVMSWNTVLNGYASNGDVMACERLF 202
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLV 438
E+ E++ SW ++I G NG ++ L F +M + G P+D T + VLSAC+ G +
Sbjct: 203 EEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGAL 262
Query: 439 DEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
D G ++ + E + + + L+D+ + G+++ A ++ + + N++
Sbjct: 263 DLG-KWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKD 311
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 10/303 (3%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
N + ++ V + S+G+++ E++F + + ++N LI + + G F + L F +
Sbjct: 176 NKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKR 235
Query: 79 LRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
+ G V P++ T V A LG + G+ VH Y G + + YV N++MDMY G
Sbjct: 236 MLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCG 295
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVST 196
+ +F M +KD++SWN I G DA+++F M+ G N PD T +
Sbjct: 296 VVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGEN--PDGITFIGI 353
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NK 253
L ACT + +E G + + + P + + ++D+ + G L+ A + +MP
Sbjct: 354 LCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEA 413
Query: 254 NVICWTSMVSG---YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
+ + W +++ Y N E A + ++ + + N Y F R+ + L
Sbjct: 414 DAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKV 473
Query: 311 EMQ 313
M+
Sbjct: 474 AMR 476
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 140/318 (44%), Gaps = 46/318 (14%)
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+E A +FD+ P + +W AM GY Q + + LFR+M+ + + P+ F +L
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C ++ AL++G+ +H ++ ++ + VAT LI+MYA G I A +F E+ E++ +W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 391 TSII------CGLAMNGKI-----NKALELFSQMISGGAKPDDI---------------- 423
T++I C L ++ + + L++ MISG + D+
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVM 180
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
++ VL+ + G V R F M E + + LI R G E ++
Sbjct: 181 SWNTVLNGYASNGDVMACERLFEEMPE-----RNVFSWNALIGGYTRNGCFSEVLSAFKR 235
Query: 484 -------IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF-HTLLAN 535
+PN+ + V LSAC G +D+G+ + E K + + L +
Sbjct: 236 MLVDGTVVPNDATLVNV------LSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMD 289
Query: 536 IYASANRWEDVTNVRQKM 553
+YA E +V + M
Sbjct: 290 MYAKCGVVETALDVFKSM 307
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/607 (37%), Positives = 333/607 (54%), Gaps = 55/607 (9%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+KQI AQ+ + L Q+P KL+ ++ NL A +F + P + YN LI+
Sbjct: 36 NHIKQIHAQLIKCHLHQDPYIAPKLIA--SYSLTNNLSSAVNVFNQVPDPNVHLYNYLIR 93
Query: 62 AFAKKGSFRKSLLLFS---KLRERGVSPDNFTYPFVFK----AVGWLGEVKKGEKVHGYV 114
A++ G+ SL F K+ GV DNFTYPF+ K + WL VK VH +V
Sbjct: 94 AYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKM---VHAHV 150
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
K G +D +V NS++D Y G + K+F M ++DVVSWN + G VK + A+
Sbjct: 151 EKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGAL 210
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMY 234
VF M P+ V N +LD +
Sbjct: 211 KVFDEM-------PERDRVS--------------------------------WNTMLDGF 231
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
K G + +A +LF+ M ++++ W++MV GY G ++ AR LFDR PV+++VLWT +I+
Sbjct: 232 TKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIIS 291
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY + + EA+ L EM+ L+ D +++L CA+ G L GK +H +R
Sbjct: 292 GYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRC 351
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQM 413
V + I+MYAKCG ++ A +F ++ EKD SW S+I G ++G K++ELF+ M
Sbjct: 352 STKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTM 411
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
+ G KPD TFIG+L AC+H GLV+EGR +F +M VY I P++EHYGC++DLLGR G
Sbjct: 412 VREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGH 471
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA L+R +P E N II+ G LL ACR++ +V + ++ L K+ D +LL
Sbjct: 472 LKEAFWLVRSMPFEPNAIIL---GTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNFSLL 528
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA + W +V VR++M + G +K G SSIE+ +HEF V D SH + +IY+M+
Sbjct: 529 SNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDIYNMI 588
Query: 594 DRMAKTL 600
DR+ L
Sbjct: 589 DRLVHDL 595
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/606 (35%), Positives = 337/606 (55%), Gaps = 14/606 (2%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLM------VFCTHPSHGNLLYAEKIFGSIQSPCLLAY 56
LKQI AQI PE N L+ + S +L YA +F I +P
Sbjct: 31 HLKQIHAQILHS--NTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFS 88
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRE-RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
N L++ ++ K++ L+ LR + D F++P + KAV + G ++HG
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K G D ++ ++ MY +I + + LFD+M D V+WN+ I G+ + ++DA+
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMY 234
+F MR ++ PD + + LSAC NL G+ IH ++ + AL++MY
Sbjct: 209 LFEDMRSS-DMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMY 267
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
CG + AR+++D + +K++I T+M+SGY G ++ AR +FD+ RD+V W+AMI+
Sbjct: 268 ANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMIS 327
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY + ++ EA+ LF EM R PD+ ++++++ C+ +GAL Q WIH Y++ +
Sbjct: 328 GYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGR 387
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
V ALI+MYAKCG + KA E+F + K+ SW+S+I AM+G + A++LF +M
Sbjct: 388 ALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMK 447
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
+P+ +TFIGVL AC H GLV+EG + F++M + I P EHYGC++DL RA L
Sbjct: 448 EVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFL 507
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+A ELI +P N II +G+L+SAC+++G ++GE A L ++E +L+
Sbjct: 508 RKAIELIETMPFAPNVII---WGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLS 564
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA RW DV +R+ M G+ K S IEIN +H F++ D H + EIY LD
Sbjct: 565 NIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLD 624
Query: 595 RMAKTL 600
+ L
Sbjct: 625 EVVSKL 630
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/536 (36%), Positives = 324/536 (60%), Gaps = 26/536 (4%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A F S C +NLLI+A A S R + FS + G +PD FT+P + K+
Sbjct: 31 ASLYFPLFPSSCTFLHNLLIRASATSPSPRLAFAAFSSILRSGDTPDRFTFPSLLKSASR 90
Query: 101 LGEV-KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD-KDVVSWN 158
L + G +VH V+ GL D +V N+++ MY +++++FD D+V+WN
Sbjct: 91 LASFPRTGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTWN 150
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
+ G+VKC +A VF +M Q + + + + A L++ +E+
Sbjct: 151 TMLGGYVKCGEIGEARRVFEQMPQRNGV-----SWSAMVGAYAGAGELDVAREM------ 199
Query: 219 ELEFTPIMG------NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+ P +G N+++ + + G L AR++FDEMP +N++ W +MV GY G++
Sbjct: 200 -FDEMPAIGRNVVSWNSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMN 258
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGC 331
AR+LFDR P +D+V WT MI+GY Q + E + LFR MQ + P++ +V++L+ C
Sbjct: 259 DARELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSAC 318
Query: 332 AQLGALEQGKWIHGYINENRITVDAV--VATALIEMYAKCGLIEKALEIFYELREKDAAS 389
A L ALE+G+W H +I+++++ +D+ + ALI+MY+KCG + A++IF+ L +K+ ++
Sbjct: 319 AHLTALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSLDQKNVSA 378
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W ++I GLA+NG + ++++F QM G KP+ ITF+GVL+AC+HGGLVDEGRR F +M
Sbjct: 379 WNALITGLAVNGDVRSSIDVFEQMRRSGEKPNGITFVGVLTACAHGGLVDEGRRCFQSMA 438
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+QP+ +HYGC++D+LGRAGLL+EAEELIR +P + +I+ GALL ACR++ V
Sbjct: 439 STCGVQPEAKHYGCMVDMLGRAGLLEEAEELIRSMPMVPDVMIL---GALLGACRMHKRV 495
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
D+ ++ + + ++ S H L+++IYA+A +W D R +++ G+ K+ G S
Sbjct: 496 DVAARVQNEILGLSTQQSGCHVLISDIYAAAGKWADALYARGVLQKFGISKLRGSS 551
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 241/679 (35%), Positives = 366/679 (53%), Gaps = 86/679 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNP---ETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAY 56
+ Q K + ++ +GLQ + + L L V C NL YA+ +F I++P ++
Sbjct: 19 LKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSC------NLFDYAKNVFDVIENPFEISL 72
Query: 57 -NLLIKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
N L+ + + + ++L LF KL + PD++TYP V KA G L V G+ +H +
Sbjct: 73 CNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCL 132
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
VK GL D V +S++ MY + KLFDEMPDKDV WN IS + + +FE+A+
Sbjct: 133 VKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEAL 192
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDM 233
F MR+ PD T+ + +S+C L +L+ G+EIH+ +N + AL+DM
Sbjct: 193 RYFGMMRR-FGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDM 251
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGY------VNCGQLEK-------------- 273
Y KCG L A E+F++MPNK V+ W SM++GY ++C QL K
Sbjct: 252 YGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTL 311
Query: 274 ---------ARDLFDRSPVR----------DIVLWTAMINGYVQFNRFDEAVALFR---- 310
+ L + V DI L +++++ Y + + + A +F+
Sbjct: 312 TSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPK 371
Query: 311 ---------------------------EMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
EM ++PD ++L C+QL ALE+G+ I
Sbjct: 372 TTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREI 431
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H I E + + VV AL++MYAKCG +E+A +F L E+D SWTS+I +G++
Sbjct: 432 HNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRV 491
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
+ALELF++M+ KPD +TF+ +LSACSH GLVD+G FN M VY I P++EHY C
Sbjct: 492 YEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSC 551
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
LI LLGRAG L EA E+++ P +++ L L SACR++ N+D+G ++A L +
Sbjct: 552 LITLLGRAGRLHEAYEILQSNPEISDDF--QLLSTLFSACRLHKNLDLGVEIAENLIDKD 609
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
DSS + +L+N+YAS +W++V VR KMK++G++K PGCS IEIN I F V D SH
Sbjct: 610 PDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSH 669
Query: 584 SEMKEIYSMLDRMAKTLLD 602
++ I ++L + + D
Sbjct: 670 YHLEGIGNILSYLTSHMED 688
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
L+ LL +L+QGK +H + + D V LI +Y C L + A +F +
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 384 EKDAASWTS-IICGLAMNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGL 437
S + ++ G N ++AL LF +++ KPD T+ VL AC GGL
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC--GGL 119
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/569 (36%), Positives = 335/569 (58%), Gaps = 49/569 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L Q A I GL+Q+ ++ + T S Y+ IF + +P YN+L+
Sbjct: 22 IPHLHQFHAHIIHKGLEQDHFIISHFLSISTSVS-----YSTSIFNRLLNPSTFLYNILL 76
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
K F+K F + LF ++++ + D +TYP + K +K+GE VHG ++ G+
Sbjct: 77 KIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCSNELRLKEGEIVHGSAIRCGV 136
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D YV +S++ YG +I + +K+FDE+P+++VVSW ++G+ E+A VF R
Sbjct: 137 SDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFER 196
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
M + +NL NA++ K G
Sbjct: 197 MPE---------------------RNLP------------------SWNAMISGLGKAGD 217
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
LS AR++FDEM +NV+ +T M+ GY G + AR LFD +P +D+V W+A+I+GY +
Sbjct: 218 LSGARKVFDEMVERNVVSFTVMIDGYAKVGDMASARALFDEAPEKDVVAWSALISGYSRN 277
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI-TVDAVV 358
+ +EAV +F EM + +KPD+FI+V+L++ C+QLG + KW+ Y+++ I T A V
Sbjct: 278 EQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHV 337
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI+M+AKCG +EKA+++F ++ +D S+I GL+++G+ +A+ELF++M+ G
Sbjct: 338 LAALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGL 397
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD + F +L+ACS GGL+++G FF+TM Y + P HY C++DLL RAG L A
Sbjct: 398 IPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAY 457
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
+L++ +P + + +GALL AC+++G+V++ E++A L ++E + + + LL+NIYA
Sbjct: 458 DLLKSMPLKPHACA---WGALLGACKLHGDVELREEVANRLLELEPEKAGSYVLLSNIYA 514
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
SAN+W DV+ VR +MKE G+RK+PGCS I
Sbjct: 515 SANQWLDVSIVRDEMKERGIRKIPGCSYI 543
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 350/637 (54%), Gaps = 43/637 (6%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHG-NLLYAEKIFGSIQSPCLLAYNL 58
Q ++ A + G +P + + L+ V C P+ +L YA +F + L
Sbjct: 14 QAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDTA 73
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW-LGEVKKGEKVHGYVVKT 117
L F L+L+ ++R GV D FT+ F+FK V + +H +T
Sbjct: 74 LRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRT 133
Query: 118 GLEFDT-YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK--------CM 168
L V N I+ MY LG + ++ FD++P KD V+W ISG K C+
Sbjct: 134 MLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCL 193
Query: 169 -----------------------RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
R +AVD F M + PDE TV+ LSAC LK+
Sbjct: 194 LRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSD-GIEPDEVTVIGLLSACAQLKD 252
Query: 206 LELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVS 263
L G+ +H+ + ++ + + + AL+DMY KCG + A E+FD + + W +M+
Sbjct: 253 LVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMID 312
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
GY G ++ AR LFD+ RD+V + ++I GY+ R EA+ LF +M+ L+ D F
Sbjct: 313 GYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFT 372
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+V+LLT CA LGAL QG+ +H I + + VD + TAL++MY KCG +E+A +F +
Sbjct: 373 MVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMS 432
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+D +W+++I GLA NG ALE F M G +P+ +T+I +L+ACSH L+DEGR
Sbjct: 433 VRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRL 492
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+F M ++ I+P +EHYGC+IDLLGR+GLLDEA +L+R +P + N +I + ++LSAC
Sbjct: 493 YFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVI---WASILSAC 549
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
R++ + ++ A L K+E + + + L NIY + +WED + +R+ M+E GV+K G
Sbjct: 550 RVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAG 609
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
SSI + G +H+F+V D +H ++ EI +M++ + + L
Sbjct: 610 YSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRL 646
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/606 (36%), Positives = 329/606 (54%), Gaps = 53/606 (8%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGN------LLYAEKIFGSIQSPCLLAYN 57
L QI A I + L N L + C + + +A + F + + N
Sbjct: 33 LLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKRPLAIINHARRFFNATHTRDTFLCN 92
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERG--VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+I A F + LF LR + +PD +T+ + K +G +HG V+
Sbjct: 93 SMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGCATRVATGEGTLLHGMVL 152
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K G+ FD YV +++DMY G + + +K+FDEM + VSW I G+ +C +A
Sbjct: 153 KNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARR 212
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG-NALLDMY 234
+F E+E I+ NA++D Y
Sbjct: 213 LF----------------------------------------DEMEDRDIVAFNAMIDGY 232
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
K GC+ ARELF+EM +NV+ WTSMVSGY G +E A+ +FD P +++ W AMI
Sbjct: 233 VKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIG 292
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY Q R +A+ LFREMQ ++P++ +V +L A LGAL+ G+WIH + ++
Sbjct: 293 GYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDR 352
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
A + TALI+MYAKCG I KA F + E++ ASW ++I G A+NG +ALE+F++MI
Sbjct: 353 SARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNALINGFAVNGCAKEALEVFARMI 412
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
G P+++T IGVLSAC+H GLV+EGRR+FN M E + I P++EHYGC++DLLGRAG L
Sbjct: 413 EEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAM-ERFGIAPQVEHYGCMVDLLGRAGCL 471
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
DEAE LI+ +P + N II+ + L AC + +V E++ + K++ + + +L
Sbjct: 472 DEAENLIQTMPYDANGIILS---SFLFACGYFNDVLRAERVLKEVVKMDEDVAGNYVMLR 528
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
N+YA+ RW DV +V+Q MK+ G K CS IEI G EF GD HS ++ I L
Sbjct: 529 NLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEIGGSFIEFAAGDYLHSHLEVIQLTLG 588
Query: 595 RMAKTL 600
+++K +
Sbjct: 589 QLSKHM 594
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/514 (37%), Positives = 317/514 (61%), Gaps = 11/514 (2%)
Query: 110 VHGYVVKTGLEFDTYVCNSIM----DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+H Y+++T + D + + ++ D I ++F ++ + ++ +N I GH
Sbjct: 36 IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHS 95
Query: 166 KCMRFEDAVDVF-RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFT 223
+ A + + RQG L+PD T + +CT L + +G + H +I E
Sbjct: 96 GSKNPDQAFHFYVQSQRQG--LLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKD 153
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ N+L+ MY G A +F M +V+ WTSM+ G+ CG +E AR LFD+ P
Sbjct: 154 VYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE 213
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+++V W+ MI+GY Q N FD+AV LF+ +Q ++ ++ ++V++++ CA LGALE G+
Sbjct: 214 KNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERA 273
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H Y+ +N +T++ ++ TAL++MYA+CG I+KA+ +F +L E+D SWT++I GLAM+G
Sbjct: 274 HDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYS 333
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
++L+ F+ M+ G P DITF VLSACSHGGLV+ G + F +M ++++P+LEHYGC
Sbjct: 334 ERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGC 393
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLLGRAG L+EAE + K+P + N P++GALL ACRI+ N ++GE++ +L ++
Sbjct: 394 MVDLLGRAGKLEEAERFVLKMPVKPN---APVWGALLGACRIHKNAEIGERVGKILIQLL 450
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
+ S ++ LL+NIYA+A WE VT +RQ MK G++K PG S IE++G +H+F +GD SH
Sbjct: 451 PQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSH 510
Query: 584 SEMKEIYSMLDRMAKTLLDSKQNAMEGDNLVAIN 617
EM +I M + + + + D L I+
Sbjct: 511 PEMDKIERMWEEILMRIRAAGYRGNTADALFDID 544
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 215/443 (48%), Gaps = 70/443 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL--YAEKIFGSIQSPCLLAYNL 58
+T LK I A + + + + ++L+ FC PS G L YA +IF IQ+P L +N
Sbjct: 30 LTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNA 89
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+I+ + + ++ + + + +G+ PDN T+PF+ K+ L + G + HG+++K G
Sbjct: 90 MIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHG 149
Query: 119 LEFDTYVCNSIMDMYGVL-------------------------------GKICNVKKLFD 147
E D YV NS++ MY G + + +KLFD
Sbjct: 150 FEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFD 209
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+MP+K++V+W+ ISG+ + F+ AV++F+ + Q + +E +VS +S+C L LE
Sbjct: 210 QMPEKNLVTWSTMISGYAQNNHFDKAVELFKVL-QSQGVRANETVMVSVISSCAHLGALE 268
Query: 208 LGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
LG+ H Y+ + + I+G AL+DMY +CG + +A +F+++P ++ + WT++++G
Sbjct: 269 LGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLA 328
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
++GY + ++ F M L P A
Sbjct: 329 --------------------------MHGYSE-----RSLKYFATMVEAGLTPRDITFTA 357
Query: 327 LLTGCAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
+L+ C+ G +E+G I + ++R+ ++++ + G +E+A ++ K
Sbjct: 358 VLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVK 417
Query: 386 -DAASWTSII--CGLAMNGKINK 405
+A W +++ C + N +I +
Sbjct: 418 PNAPVWGALLGACRIHKNAEIGE 440
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/629 (34%), Positives = 345/629 (54%), Gaps = 56/629 (8%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA----YNLLIKAFAKKGSFRKSLL 74
NP+ + + + + + GNL +IF +P + YN +I +A G +L
Sbjct: 76 NPDAIARTTLITAYCALGNLELGREIFNG--TPLYMRDSVFYNAMITGYAHNGDGHSALE 133
Query: 75 LFSKLRERGVSPDNFTYPFVFKA-VGWLGEVKKGEKVHGYVVKTGLE-FDTYVCNSIMDM 132
LF +R PD+FT+ V A V ++G ++ ++H VVKTG+ + V N+++ +
Sbjct: 134 LFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSV 193
Query: 133 Y----GVLGKICNV----KKLFDEMPDKDVVSW--------------------------- 157
Y LG C+ +KLFDEMP +D ++W
Sbjct: 194 YVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENL 253
Query: 158 ----NVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
N ISG+V C F++A+ + R+MR + D+ T + +SAC + + ++GK++H
Sbjct: 254 GAAWNAMISGYVHCGCFQEALTLCRKMR-FLGIQFDDITYTTIISACANVGSFQMGKQMH 312
Query: 214 RYI-----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
YI N F + NAL+ +YCK + EAR++F MP +N+I W +++SGYVN
Sbjct: 313 AYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNA 372
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G++E+A+ F+ PV++++ T MI+G Q DE + LF++M++ +P F L
Sbjct: 373 GRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGAL 432
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
T C+ LGALE G+ +H + V A+I MYAKCG++E A +F + D
Sbjct: 433 TACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
SW S+I L +G KA+ELF QM+ G PD ITF+ VL+ACSH GLV++GR +FN+M
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
E Y I P +HY ++DL RAG+ A +I +P++ P++ ALL+ CRI+GN
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPG---APVWEALLAGCRIHGN 609
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+D+G + A L K+ ++ + LL+NIYA RW DV VR+ M++ VRK P CS IE
Sbjct: 610 MDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIE 669
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ +H F+V D H E+ +Y L+++
Sbjct: 670 VENKVHVFMVDDDVHPEVLSVYRYLEQLG 698
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 55/346 (15%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RD 285
N LL+MYCK + AR+LF+E+PN + I T++++ Y G LE R++F+ +P+ RD
Sbjct: 52 NRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ--GKWI 343
V + AMI GY A+ LFR M+ +PD F ++L+ EQ G+
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 344 HGYINENRITVDAVVATALIEMYAK--------CGLIEKALEIFYELREKDAASWTSIIC 395
+ V + V AL+ +Y K C + A ++F E+ ++D +WT++I
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 396 GLAMNGKINKALELF-----------SQMISG--------------------GAKPDDIT 424
G N +N A E+F + MISG G + DDIT
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK----LEHYGCLIDLLGRAGLLDEAEEL 480
+ ++SAC++ G G++ + + ++ P L LI L + +DEA ++
Sbjct: 292 YTTIISACANVGSFQMGKQMHAYILK-NELNPNHSFCLSVSNALITLYCKNNKVDEARKI 350
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
+P N + + A+LS Y N E+ + E++ K+
Sbjct: 351 FYAMPVRN----IITWNAILSG---YVNAGRMEEAKSFFEEMPVKN 389
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/500 (39%), Positives = 308/500 (61%), Gaps = 17/500 (3%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
++HG ++KTGL D + ++ G + + +FD + + WN I G+
Sbjct: 36 QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYI-----NQEL 220
E+A+ ++ M + +P T L AC+++ E ++IH +I E+
Sbjct: 96 SKEPEEALLLYHHMLY--HSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEI 153
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
T N+LL++Y K G + AR LFD++ ++ + W SM+ GY CG++E A ++F+
Sbjct: 154 YTT----NSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNH 209
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P R+I+ WT+MI+G V + EA+ LF MQ +K D LV+ L CA LG L+QG
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
KWIH YI ++ I +D ++ LI+MYAKCG +E+A+E+F ++ EK + WT++I G A++
Sbjct: 270 KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIH 329
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ +ALE F +M + G +P+ +TF G+L+ACSH GLV E + F +M ++ +P +EH
Sbjct: 330 GRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEH 389
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC++DLLGRAGLL EAEELI +P + N I +GALL+AC I+GN+++G+++ +L
Sbjct: 390 YGCMVDLLGRAGLLKEAEELIENMPVKPNAAI---WGALLNACHIHGNLELGKQIGKILI 446
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+++ + LA+I+A+A W VR++MKE GV K+PGCS I +NG HEFL GD
Sbjct: 447 QVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGD 506
Query: 581 PSHSEMKEIYSMLDRMAKTL 600
SH ++KEI ML+++ + L
Sbjct: 507 ESHPQIKEIDHMLEQIVERL 526
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 215/442 (48%), Gaps = 76/442 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +L+QI Q+ + GL + +KL+ FC P+ G+L YA +F I P +N +I
Sbjct: 31 MEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ ++LLL+ + V + +T+PF+ KA + ++ +++H +++K G
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFG 150
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ Y NS++++Y G I + + LFD++ +D VSWN I G+ KC E A ++F M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 181 RQ-----------GC----------NLMP---------DEGTVVSTLSACTALKNLELGK 210
+ GC NL D +VSTL AC L L+ GK
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 270
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH YI + E+E PI+G L+DMY KCG L EA E+F +M K V WT+M+SGY
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA--- 327
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
I+G R EA+ F +MQ ++P++ +LT
Sbjct: 328 -----------------------IHG-----RGREALEWFMKMQTAGVEPNQMTFTGILT 359
Query: 330 GCAQLGALEQGKW-------IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
C+ G + + K IHG+ + +++ ++++ + GL+++A E+ +
Sbjct: 360 ACSHAGLVHEAKLLFESMERIHGF----KPSIEHY--GCMVDLLGRAGLLKEAEELIENM 413
Query: 383 REK-DAASWTSIICGLAMNGKI 403
K +AA W +++ ++G +
Sbjct: 414 PVKPNAAIWGALLNACHIHGNL 435
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/605 (32%), Positives = 348/605 (57%), Gaps = 12/605 (1%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++I + +G++ + L+ + G + A ++F + ++++ +I+A A
Sbjct: 177 RKIHTIVKAMGMETDVAVATALITM--YSKCGEISVACEVFHKMTERNVVSWTAIIQANA 234
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ ++ L+ ++ + G+SP+ T+ + + + +G ++H ++ + GLE D
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC-MRFEDAVD----VFRR 179
V N+++ MY + +++FD M +DV+SW+ I+G+ + + ++++D + R
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLER 354
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
MR+ + P++ T +S L ACTA LE G++IH +++ E + A+ +MY KCG
Sbjct: 355 MRRE-GVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCG 413
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ EA ++F +M NKNV+ WTS +S Y+ CG L A +F P R++V W MI GY Q
Sbjct: 414 SIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQ 473
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ L M+ +PD+ ++ +L C L LE+GK +H + + D VV
Sbjct: 474 NGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVV 533
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
AT+LI MY+KCG + +A +F ++ +D +W +++ G +G +A++LF +M+
Sbjct: 534 ATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERV 593
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P++IT V+SACS GLV EGR F M E +++ P+ +HYGC++DLLGRAG L EAE
Sbjct: 594 SPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAE 653
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E I+ +P E + + ++ ALL AC+ + NV + E+ A + ++E +S + L+NIYA
Sbjct: 654 EFIQSMPCEPD---ISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYA 710
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
A RW+D T VR+ M + G++K G SSIEI+G IH F+ D +H E+ I++ L+ + K
Sbjct: 711 QAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTK 770
Query: 599 TLLDS 603
+ ++
Sbjct: 771 EMKEA 775
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/521 (26%), Positives = 246/521 (47%), Gaps = 70/521 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K + Q+ ++G++ + N L+ F + ++ AE++F + ++ ++ +I A+A
Sbjct: 76 KMVHKQLDELGVEIDIYLGNSLINF--YSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYA 133
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K+ F ++ + + P+ T+ + KA ++KG K+H V G+E D
Sbjct: 134 GNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVA 193
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V +++ MY G+I ++F +M +++VVSW I + + + +A +++ +M Q
Sbjct: 194 VATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQA- 252
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEA 243
+ P+ T VS L++C + L G+ IH +I++ LE I+ NAL+ MYCKC + EA
Sbjct: 253 GISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEA 312
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
RE+FD M ++VI W++M++GY +GY D
Sbjct: 313 REIFDRMSKRDVISWSAMIAGYAQ--------------------------SGYKDKESID 346
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
E L M+ + P+K +++L C GALEQG+ IH +++ +D + TA+
Sbjct: 347 EVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIF 406
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTS------------------------------- 392
MYAKCG I +A ++F ++ K+ +WTS
Sbjct: 407 NMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNL 466
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
+I G A NG I K EL S M + G +PD +T I +L AC ++ G+ +
Sbjct: 467 MIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGK-----LVHAE 521
Query: 453 QIQPKLEH----YGCLIDLLGRAGLLDEAEELIRKIPNENN 489
++ LE LI + + G + EA + K+ N +
Sbjct: 522 AVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDT 562
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 229/458 (50%), Gaps = 45/458 (9%)
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G R+++ L +++RG+ ++ TY V + + G+ VH + + G+E D Y
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ NS+++ Y + + +++F M +DVV+W+ I+ + A D F RM
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDA- 151
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEA 243
N+ P+ T +S L AC LE G++IH + +E + AL+ MY KCG +S A
Sbjct: 152 NIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVA 211
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
E+F +M +NV+ W TA+I Q + +
Sbjct: 212 CEVFHKMTERNVVSW-------------------------------TAIIQANAQHRKLN 240
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA L+ +M + P+ V+LL C AL +G+ IH +I+E + D +VA ALI
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG-----KINKALELFSQMISGGA 418
MY KC +++A EIF + ++D SW+++I G A +G I++ +L +M G
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEA 477
P+ +TF+ +L AC+ G +++GR+ +++V +++ L+ + ++ + G + EA
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEA 418
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
E++ K+ N+N V + + LS G++ EK+
Sbjct: 419 EQVFSKMANKN----VVAWTSFLSMYIKCGDLSSAEKV 452
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/497 (38%), Positives = 309/497 (62%), Gaps = 6/497 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL--GKICNVKKLFDEMPDKDVVSWNVSI 161
+K +K+H +++KTGL + ++ G I +F ++ ++ SWN I
Sbjct: 37 MKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWNTII 96
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQEL 220
G + A+ +F M ++ P T S A L G ++H R I L
Sbjct: 97 RGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGL 156
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+F P + N ++ MY CG LSE + F E + +++ W SM+ G CG+++++R LFD
Sbjct: 157 QFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDESRKLFDE 216
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P+R+ V W +MI+GYV+ R EA+ LF +MQ R+KP +F +V+LL A+LGAL+QG
Sbjct: 217 MPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALKQG 276
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+WIH YI +N ++ +V ++I+MY KCG I +A ++F K +SW ++I GLAMN
Sbjct: 277 EWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMN 336
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G N+A++LFS++ +PDD+TF+GVL+AC++ GLVD+ + +F+ M++ Y+I+P ++H
Sbjct: 337 GCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPSIKH 396
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C++D LGRAGLL+EAEELIR +P + II + +LLSACR +GNV++ ++ A +
Sbjct: 397 YSCMVDTLGRAGLLEEAEELIRNMPVNPDAII---WSSLLSACRKHGNVELAKRAAKHIV 453
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++ DS + LL+NIYA+++++E+ R MKE + K PGCS IE+NG IHEF+ G
Sbjct: 454 DLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVNGEIHEFVAGG 513
Query: 581 PSHSEMKEIYSMLDRMA 597
H + +E+YS+L+ +
Sbjct: 514 RLHPQAQEVYSLLNELG 530
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 216/441 (48%), Gaps = 67/441 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M L++I A + + GL ++P ++ ++ FC G++ YA +F I SP L ++N +I
Sbjct: 37 MKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWNTII 96
Query: 61 KAFAKKGSFRKSLLLF-SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ F++ + ++ LF L V P TYP VFKA LG G ++HG V+K GL
Sbjct: 97 RGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGL 156
Query: 120 EFDTYVCNSIMDMY---GVL----------------------------GKICNVKKLFDE 148
+FD ++ N+I+ MY G L G++ +KLFDE
Sbjct: 157 QFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDESRKLFDE 216
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP ++ VSWN ISG+V+ R +A+D+F +M++ + P E T+VS L+A L L+
Sbjct: 217 MPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEE-RIKPSEFTMVSLLNASARLGALKQ 275
Query: 209 GKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+ IH YI + E I+ +++DMYCKCG + EA ++F+ P K + W +M+ G
Sbjct: 276 GEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLA- 334
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+NG +EA+ LF ++ L+PD V +
Sbjct: 335 -------------------------MNGCE-----NEAIQLFSRLECSNLRPDDVTFVGV 364
Query: 328 LTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELR-EK 385
LT C G +++ K +++ +I + +++ + GL+E+A E+ +
Sbjct: 365 LTACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNP 424
Query: 386 DAASWTSIICGLAMNGKINKA 406
DA W+S++ +G + A
Sbjct: 425 DAIIWSSLLSACRKHGNVELA 445
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/576 (38%), Positives = 343/576 (59%), Gaps = 17/576 (2%)
Query: 23 LNKLMVF--CTHPSHGNLLYAEKIFGSIQS-PCLLAYNLLIKAFAKKGSFRKSLLLFSKL 79
+++L+ F +HP NL A +F P L +N +I F S K+ ++ +
Sbjct: 1 MSRLLFFSAVSHPE--NLELAILLFNHFTPYPNLYIFNTMILGFP--FSNEKAFTIYRSM 56
Query: 80 RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL-EFDTYVCNSIMDMYGVLGK 138
+ G PD T+ ++ + ++ EVK+ +H + + GL + Y+ NS++ Y G
Sbjct: 57 LQNGTYPDRQTFLYLLQTTKFVAEVKQ---IHCHALVFGLLSKEEYLRNSLIKRYVDNGC 113
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
++LFDEM D++VVS+N I G K +++F MR L PD+ T++ L
Sbjct: 114 FECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSH-GLEPDDFTMLGLLL 172
Query: 199 ACTALKNLELGKEIHRYINQELEFTP-IMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
C L +LGK +H I + + + I+ NALLDMY KC L AR++FD K+ +
Sbjct: 173 LCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVS 232
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W ++++GY G+LE A DLF++ P RDIV W ++I+GY Q + LF M +
Sbjct: 233 WNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENV 292
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
KPDK +V L++ A++GAL+QG+WIHG + ++A +ALI+MY KCG IE+A
Sbjct: 293 KPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFV 352
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
IF ++ EKD +WT++I G A +G NKALELFS M KP+D+TF+ VL+ACSH GL
Sbjct: 353 IFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVM-QAETKPNDVTFVSVLAACSHSGL 411
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
VDEG + F++M + Y I+P +EHYGCL+DLL R+G L +A +I K+P E + I +G
Sbjct: 412 VDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSI---WG 468
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
A+LSACR++ N+++ E+ L K+E + + LL+N+YA+ RW ++R+ M G
Sbjct: 469 AVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRG 528
Query: 558 VRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
V+K+ GCSS+ ++G++H+F + H +I S+L
Sbjct: 529 VKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSIL 564
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 328/533 (61%), Gaps = 47/533 (8%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLG-----KICNVKKLFDEMPDKDVVSWNVSIS 162
++ H +++TG D+Y+ S++ Y + + ++FD + +V WN I
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI------ 216
++ A+ ++ M + P++ T + L AC+ + G ++H ++
Sbjct: 111 VCIENNEPFKAILLYYEMMVA-HFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLG 169
Query: 217 ---------------------------NQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
++ E + NA++D Y + G + ARELF+
Sbjct: 170 GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEG 229
Query: 250 MPNKNVI-CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
MP++++I W +M+SG+ CG +E AR+ FD RD + W+AMI+GY+Q F EA+ +
Sbjct: 230 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 289
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F +MQ +++P KF+L ++L+ CA LGAL+QG+WIH Y N I +D V+ T+L++MYAK
Sbjct: 290 FHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAK 349
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
CG I+ A E+F ++ K+ +SW ++I GLAM+G+ A++LFS+M P++ITF+GV
Sbjct: 350 CGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGV 406
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L+AC+HGGLV +G FN+M + Y ++P++EHYGC++DLLGRAGLL EAE+++ IP E
Sbjct: 407 LNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEP 466
Query: 489 NEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTN 548
+ +GALL ACR +GNV++GE++ +L ++E ++S +TLL+NIYA A RWE+V
Sbjct: 467 TPAV---WGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGE 523
Query: 549 VRQKMKEMGVRKVPGCSSIEI-NGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
VR+ MKE G++ PG S I++ G +H+F++GD SH ++K+IY MLD++ + L
Sbjct: 524 VRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERL 576
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 224/567 (39%), Gaps = 149/567 (26%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAE---KIFGSIQSPCLLAYN 57
+ LKQ A I + G Q+ L+ + S L E ++F ++ P + +N
Sbjct: 47 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 106
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+IK + K++LL+ ++ P+ +TYP V KA G V +G +VH ++VK
Sbjct: 107 CMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKH 166
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKK--------------------------------L 145
GL D ++ +S + MY G++ ++ L
Sbjct: 167 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAREL 226
Query: 146 FDEMPDKDVVS-WNVSISGHVKCMRFEDAVDVFRRMR----------------QGC---- 184
F+ MPD+ ++S WN ISG +C E A + F M+ +GC
Sbjct: 227 FEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEA 286
Query: 185 ----------NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDM 233
+ P + + S LSAC L L+ G+ IH Y + ++ ++G +L+DM
Sbjct: 287 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 346
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG + A E+F++M NK V W +M+ G G+ E A DLF +
Sbjct: 347 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSK------------- 393
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+ + P++ V +L CA HG
Sbjct: 394 ---------------------MDINPNEITFVGVLNACA-----------HG-------- 413
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELR-----EKDAASWTSIICGLAMNGKINKALE 408
GL++K L IF +R E + I+ L G + +A +
Sbjct: 414 ----------------GLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 457
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE-HYGCLIDL 467
+ S + + +P + +L AC G V+ G R + E ++P+ Y L ++
Sbjct: 458 VVSSIPT---EPTPAVWGALLGACRKHGNVELGERVGKILLE---LEPQNSGRYTLLSNI 511
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVP 494
+AG +E E +RK+ E P
Sbjct: 512 YAKAGRWEEVGE-VRKLMKERGIKTTP 537
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 154/317 (48%), Gaps = 18/317 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A + F ++ ++++ +I + ++G F ++L +F ++++ + P F P V
Sbjct: 250 GMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVL 309
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + +G +H Y + ++ D + S++DMY G+I ++F++M +K+V
Sbjct: 310 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 369
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G R EDA+D+F +M ++ P+E T V L+AC ++ G I
Sbjct: 370 SWNAMIGGLAMHGRAEDAIDLFSKM----DINPNEITFVGVLNACAHGGLVQKGLTIFNS 425
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNKNV-ICWTSMVSGYVNCGQLE 272
+ +E P + + ++D+ + G L+EA ++ +P + W +++ G +E
Sbjct: 426 MRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVE 485
Query: 273 ----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
+ L + P ++ +T + N Y + R++E ++ +L ++ I
Sbjct: 486 LGERVGKILLELEP-QNSGRYTLLSNIYAKAGRWEEV------GEVRKLMKERGIKTTPG 538
Query: 329 TGCAQLGALEQGKWIHG 345
T LG E K+I G
Sbjct: 539 TSIIDLGRGEVHKFIIG 555
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 331/560 (59%), Gaps = 31/560 (5%)
Query: 16 LQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
L+++P L +++ + +HP L A S +N+LI+A A S R S
Sbjct: 21 LRRSPAHLRRIVPLLPSHPHLAAALCAVHFPLFPSSSATFLHNILIRASASSASPRLSFA 80
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK-GEKVHGYVVKTGLEFDTYVCNSIMDMY 133
FS L G+ PD FT P + + G L + G +VH V+ G D +V N+++ MY
Sbjct: 81 AFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMY 140
Query: 134 GVLGKICNVKKLFDEMPD-KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
G L +++++F DVVSWN I G+VKC E A VF M + G
Sbjct: 141 GALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPR------RNGV 194
Query: 193 VVSTL-SACTALKNLELGKEIHRYINQELEFTPIMG------NALLDMYCKCGCLSEARE 245
ST+ A L++ +E+ + P +G N+++ + + G L AR+
Sbjct: 195 SWSTMVGGYAAAGELDVAREM-------FDRMPAIGRNVVTWNSMVTGFARHGLLPLARK 247
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+FDEMP +N++ W +M+ GY ++ AR+LFD P +D+V WT MI+GY Q R+ +
Sbjct: 248 MFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDT 307
Query: 306 VALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV--VATAL 362
+ LFR MQ ++P++ +V++L+ CA L ALE+G+W+H +I+++++ ++ + AL
Sbjct: 308 LELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAAL 367
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MYAKCG + A++IF L K+ ++W ++I LAMNG +++ F QM G KP+D
Sbjct: 368 IDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNAQDSVDAFEQMKRTGEKPND 427
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITF+GVL+ACSHGGLVDEGRR F +M +QP+++HYGC++D+LGRAGLL+EAEELIR
Sbjct: 428 ITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIR 487
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK--IESKDSSFHTLLANIYASA 540
+P + ++ +GALL ACR++ D+ E++ + + + ++ S H L+++IYA+A
Sbjct: 488 SMPMAPDVMV---FGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAA 544
Query: 541 NRWEDVTNVRQKMKEMGVRK 560
+W DV RQ ++ G+RK
Sbjct: 545 GKWFDVLEARQVVQRSGIRK 564
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/575 (36%), Positives = 328/575 (57%), Gaps = 39/575 (6%)
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK-AVGWLGEVKKGEKVHGYVVKTGL 119
+A G +LF ++R V PD FT+ F+FK + +H ++T L
Sbjct: 17 RAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAACLRTML 76
Query: 120 -EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG--------------- 163
+V NS++ MY LG +V++ FDE+P KD VSW + ISG
Sbjct: 77 PSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLA 136
Query: 164 ----------------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+ + R ++AVD F+ M + PD+ TV+ LSAC+ LK+LE
Sbjct: 137 QAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSE-GIAPDDVTVIGVLSACSQLKDLE 195
Query: 208 LGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVSGY 265
LG +H + ++ + + + AL+DMY KCG ARE+FD + + W +++ GY
Sbjct: 196 LGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGY 255
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G ++ AR LFD+ VRDI+ + +MI GY+ + EA+ LF M+ L+ D F +V
Sbjct: 256 CKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVV 315
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
+LL+ CA LGAL QG+ +H I + D + TAL++MY KCG + +A +F + ++
Sbjct: 316 SLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKR 375
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D +WT++I GLA NG LE F QM G +P+ +++I VL+ACSH L++EGR +F
Sbjct: 376 DVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYF 435
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+ M +Y I P++EHYGC+IDLLGR+GLLDEA +L++ +P + N +I + ++LSACR+
Sbjct: 436 DEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVI---WASILSACRV 492
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ +D+ + A L KIE + + + L NI + +WED + +R M+E V+K G S
Sbjct: 493 HKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYS 552
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
S+ + G +H+F+V D SH + EI +ML+ ++ L
Sbjct: 553 SVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRL 587
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/563 (23%), Positives = 261/563 (46%), Gaps = 51/563 (9%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ ++ +GL NP + L+ H + A +F + N++++
Sbjct: 752 QLHGRVLALGLCCNPFVGSALVNHYMHVESPH--AALSLFRELPLQNTAMCNVVLRGLGN 809
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTG-LEFDT 123
+ + F +R + + + +Y + K GE +++G ++HG V+K G + +
Sbjct: 810 LKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNI 869
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
++ NS++D+Y +G + K +++ +DV+SWN +S + ++AV ++M
Sbjct: 870 FLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWH 929
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI---MGNALLDMYCKCGCL 240
MP + VS L+ + +LG +IH +++ L F+ + L+DMY KC C
Sbjct: 930 -GKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHK-LGFSCSSVHVQTTLIDMYGKCCCF 987
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ +F+E+P+ + C S+++ + C N
Sbjct: 988 DHSLAIFNEIPSIALECCNSLITSSLGC-------------------------------N 1016
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA--LEQGKWIHGYINENRITVDAVV 358
FD A+ + M + + PD A + + + L + +H + + +D V
Sbjct: 1017 MFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAV 1076
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
++LI YA G + + IF L + + +T+II A G +A+ELF QM+S G
Sbjct: 1077 CSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGL 1136
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD++TF+ ++ C G+ +EGR M ++ P H+ C+++LL R G + EA
Sbjct: 1137 KPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAM 1196
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY- 537
E++ + P + + +LL +C+ +G +G++ A +L + KD + ++N +
Sbjct: 1197 EMMEQSPLRH---YTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFN 1253
Query: 538 -----ASANRWEDVTNVRQKMKE 555
+A R +++TNV++ K
Sbjct: 1254 DIGDRETALRIKEMTNVKEVKKS 1276
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 184/399 (46%), Gaps = 77/399 (19%)
Query: 49 QSPC--LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
Q+P ++++ LI A+++ ++++ F + G++PD+ T V A L +++
Sbjct: 137 QAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLEL 196
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK---------------------- 144
G +H V + G+ + +++DMY G + ++
Sbjct: 197 GCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYC 256
Query: 145 ----------LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
LFD+M +D++++N I+G++ + +A+ +F MR+ +L D TVV
Sbjct: 257 KHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRH-DLRVDNFTVV 315
Query: 195 STLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNK 253
S LSAC +L L G+ +H I L T I +G ALLDMY KCG ++EA +F M +
Sbjct: 316 SLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKR 375
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA-VALFREM 312
+V WT+M++G + FN +A + F +M
Sbjct: 376 DVHAWTAMIAG--------------------------------LAFNGMGKAGLEYFYQM 403
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT----ALIEMYAK 368
+ +P+ +A+LT C+ L +G+ Y +E RI + +I++ +
Sbjct: 404 RCDGFQPNPVSYIAVLTACSHSCLLNEGRL---YFDEMRILYNIHPQIEHYGCMIDLLGR 460
Query: 369 CGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKA 406
GL+++A+++ + + ++ W SI+ ++ +I+ A
Sbjct: 461 SGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLA 499
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 18/260 (6%)
Query: 14 IGLQQNPETLNKLMV-FCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKS 72
+G + P++ N ++ +C HG++ A +F ++ ++ +N +I + G R++
Sbjct: 239 VGRGRRPQSWNAIIDGYC---KHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREA 295
Query: 73 LLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDM 132
LLLF +R + DNFT + A LG + +G +H + +E D Y+ +++DM
Sbjct: 296 LLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDM 355
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN-LMPDEG 191
Y G++ +F M +DV +W I+G + ++ F +MR C+ P+
Sbjct: 356 YMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMR--CDGFQPNPV 413
Query: 192 TVVSTLSACTALKNLELGK------EIHRYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
+ ++ L+AC+ L G+ I I+ ++E M +D+ + G L EA +
Sbjct: 414 SYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCM----IDLLGRSGLLDEAMD 469
Query: 246 LFDEMP-NKNVICWTSMVSG 264
L MP N + W S++S
Sbjct: 470 LVKTMPMQPNSVIWASILSA 489
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 120/562 (21%), Positives = 219/562 (38%), Gaps = 104/562 (18%)
Query: 4 LKQIQAQIFQI-----GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLL---- 54
+K ++ IF+ G Q+ P+ + +VF PS + + S +P L
Sbjct: 637 IKNLRPTIFRPLGADDGKQKQPD---RRVVFLLPPSRRDAPVLVRPIPSSPAPFSLRSSV 693
Query: 55 --------AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
+ N +I F + G ++ ++ + G+ P F + + +
Sbjct: 694 TMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIR----ETPHTFSTILGVCSTYE 749
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
++HG V+ GL + +V +++++ Y + LF E+P ++ NV + G
Sbjct: 750 ALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGN 809
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN-------LELGKEIHRYINQE 219
E+ + F MR+ + ++ LS C A+K LE G+++H + +
Sbjct: 810 LKLTEELICCFLDMRR-------QYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKA 862
Query: 220 --LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ + N+L+D+Y G + + +++ +++VI W S+
Sbjct: 863 GWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSI---------------- 906
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
++ Y EAV ++M P V+LL + G
Sbjct: 907 ---------------LSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDW 951
Query: 338 EQGKWIHGYINENRITVDAV-VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G IHG +++ + +V V T LI+MY KC + +L IF E+ S+I
Sbjct: 952 QLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITS 1011
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS-------------HGGLVDEGRR 443
+ ALE+ MI G PDD+TF + A S H LV G
Sbjct: 1012 SLGCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLG-- 1069
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
F M + + Y C AG L + + + + N V + A++SAC
Sbjct: 1070 FEMDMAVCSSL---ITAYAC-------AGQLSSSHLIFEGLLDPN----VICFTAIISAC 1115
Query: 504 RIYGNVDMGEKLAALLEKIESK 525
YG+ G + L +++ S
Sbjct: 1116 ARYGD---GARAMELFDQMVSS 1134
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/532 (39%), Positives = 305/532 (57%), Gaps = 48/532 (9%)
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G+ R +L FS + R D+FTY F+ KA+ G V VH +VVK G DT+V
Sbjct: 419 GAPRDALAAFSAMPRR----DSFTYSFLIKALSAAG-VAPVRAVHSHVVKLGSVEDTFVG 473
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++D Y G + +K+FDEMP++DVVSWN +++ V+ +F +
Sbjct: 474 NALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLF-------DE 526
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEAREL 246
MP++ TV N +LD Y K G + A EL
Sbjct: 527 MPEKDTVSW--------------------------------NTILDGYTKAGEVEAAFEL 554
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
F MP +NV+ W++MVSGY G LE AR +FD+ P +++V WT M++ Q DEA
Sbjct: 555 FQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAG 614
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
LF +M+ ++ D +V++L CA+ G+L GK IH Y+ + + V ALI+M+
Sbjct: 615 KLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMF 674
Query: 367 AKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
KCG + +A +F E +KD+ SW SII G AM+G +KALELF+QM G PD +T
Sbjct: 675 CKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTM 734
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
I VLSAC+H G VDEGRR F+ M Y I P++EHYGC+IDLLGR GL+ EA +LI+ +P
Sbjct: 735 INVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMP 794
Query: 486 NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWED 545
E NE+I +G+LLSACR++ NV+ E L K++ ++ + +L+NIYA A +W D
Sbjct: 795 WEPNEVI---WGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSD 851
Query: 546 VTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ R +MK G +K G S +E+N HEF VGD H + +I M+DR++
Sbjct: 852 MAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLS 903
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 7/233 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A IF + S L+ + +++ A A+KG ++ LF++++E V D +
Sbjct: 577 GDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSIL 636
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD-EMPDKDV 154
A G + G+++H YV K L T+VCN+++DM+ G + +FD E KD
Sbjct: 637 AACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDS 696
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
VSWN I G + A+++F +M+ QG N PD T+++ LSACT + ++ G+
Sbjct: 697 VSWNSIIGGFAMHGHGDKALELFAQMKQQGFN--PDAVTMINVLSACTHMGFVDEGRRHF 754
Query: 214 RYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVS 263
+ ++ P + + ++D+ + G + EA +L MP N + W S++S
Sbjct: 755 SNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLS 807
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/656 (34%), Positives = 352/656 (53%), Gaps = 71/656 (10%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ ++ + GL + +N LM + G L+A K+F + ++N ++ A+AK+
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLM--NVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKR 93
Query: 67 GSFRKSLLLFSKLRER-------------------------------GVSPDNFTYPFVF 95
G S F +L +R G+ P FT V
Sbjct: 94 GDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVL 153
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+V ++ G+KVH ++VK GL + V NS+++MY G K +FD M KD+
Sbjct: 154 ASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDIS 213
Query: 156 SWNVSISGHVKC-------MRFED------------------------AVDVFRRMRQGC 184
SWN I+ H++ +FE A+D+F +M +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDS 273
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
L PD T+ S LSAC L+ L +G++IH +I + + I+ NAL+ MY +CG + A
Sbjct: 274 MLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 244 RELFDEMPNKN--VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
R L ++ K+ + +T+++ GY+ G + +A+++FD RD+V WTAMI GY Q
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGL 393
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+ EA+ LFR M +P+ + L A+L+ + L +L GK IHG ++ V+ A
Sbjct: 394 YGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNA 453
Query: 362 LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
LI MYAK G I A F +R E+D SWTS+I LA +G +ALELF M+ G +P
Sbjct: 454 LITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D IT++GV SAC+H GLV++GR++F+ M +V +I P L HY C++DL GRAGLL EA+E
Sbjct: 514 DHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I K+P E + V +G+LLSACR+Y N+D+G+ A L +E ++S ++ LAN+Y++
Sbjct: 574 IEKMPIEPD---VVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 630
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+WE+ +R+ MK+ V+K G S IE+ +H F V D H + EIY + ++
Sbjct: 631 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKI 686
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/532 (39%), Positives = 305/532 (57%), Gaps = 48/532 (9%)
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G+ R +L FS + R D+FTY F+ KA+ G V VH +VVK G DT+V
Sbjct: 112 GAPRDALAAFSAMPRR----DSFTYSFLIKALSAAG-VAPVRAVHSHVVKLGSVEDTFVG 166
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++D Y G + +K+FDEMP++DVVSWN +++ V+ +F +
Sbjct: 167 NALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLF-------DE 219
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEAREL 246
MP++ TV N +LD Y K G + A EL
Sbjct: 220 MPEKDTV--------------------------------SWNTILDGYTKAGEVEAAFEL 247
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
F MP +NV+ W++MVSGY G LE AR +FD+ P +++V WT M++ Q DEA
Sbjct: 248 FQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAG 307
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
LF +M+ ++ D +V++L CA+ G+L GK IH Y+ + + V ALI+M+
Sbjct: 308 KLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMF 367
Query: 367 AKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
KCG + +A +F E +KD+ SW SII G AM+G +KALELF+QM G PD +T
Sbjct: 368 CKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTM 427
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
I VLSAC+H G VDEGRR F+ M Y I P++EHYGC+IDLLGR GL+ EA +LI+ +P
Sbjct: 428 INVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMP 487
Query: 486 NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWED 545
E NE+I +G+LLSACR++ NV+ E L K++ ++ + +L+NIYA A +W D
Sbjct: 488 WEPNEVI---WGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSD 544
Query: 546 VTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ R +MK G +K G S +E+N HEF VGD H + +I M+DR++
Sbjct: 545 MAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLS 596
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 139/270 (51%), Gaps = 11/270 (4%)
Query: 2 TQLKQIQA--QIFQIGLQQNPETLNKLMV-FCTHPSHGNLLYAEKIFGSIQSPCLLAYNL 58
T+ +++A ++FQ ++N + + ++ +C G+L A IF + S L+ + +
Sbjct: 236 TKAGEVEAAFELFQRMPERNVVSWSTMVSGYC---KKGDLEMARVIFDKMPSKNLVTWTI 292
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
++ A A+KG ++ LF++++E V D + A G + G+++H YV K
Sbjct: 293 MVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRN 352
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFD-EMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
L T+VCN+++DM+ G + +FD E KD VSWN I G + A+++F
Sbjct: 353 LGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELF 412
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYC 235
+M+Q PD T+++ LSACT + ++ G+ + ++ P + + ++D+
Sbjct: 413 AQMKQQ-GFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLG 471
Query: 236 KCGCLSEARELFDEMP-NKNVICWTSMVSG 264
+ G + EA +L MP N + W S++S
Sbjct: 472 RGGLIKEAVDLIKSMPWEPNEVIWGSLLSA 501
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/629 (34%), Positives = 345/629 (54%), Gaps = 56/629 (8%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA----YNLLIKAFAKKGSFRKSLL 74
NP+ + + + + + GNL +IF +P + YN +I +A G +L
Sbjct: 76 NPDAIARTTLITAYCALGNLELGREIFNG--TPLYMRDSVFYNAMITGYAHNGDGHSALE 133
Query: 75 LFSKLRERGVSPDNFTYPFVFKA-VGWLGEVKKGEKVHGYVVKTGLE-FDTYVCNSIMDM 132
LF +R PD+FT+ V A V ++G ++ ++H VVKTG+ + V N+++ +
Sbjct: 134 LFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSV 193
Query: 133 Y----GVLGKICNV----KKLFDEMPDKDVVSW--------------------------- 157
Y LG C+ +KLFDEMP +D ++W
Sbjct: 194 YVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENL 253
Query: 158 ----NVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
N ISG+V C F++A+ + R+MR + D+ T + +SAC + + ++GK++H
Sbjct: 254 GAAWNAMISGYVHCGCFQEALTLCRKMRF-LGIQFDDITYTTIISACANVGSFQMGKQVH 312
Query: 214 RYI-----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
YI N F + NAL+ +YCK + EAR++F MP +N+I W +++SGYVN
Sbjct: 313 AYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNA 372
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G++E+A+ F+ PV++++ T MI+G Q DE + LF++M++ +P F L
Sbjct: 373 GRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGAL 432
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
T C+ LGALE G+ +H + V A+I MYAKCG++E A +F + D
Sbjct: 433 TACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
SW S+I L +G KA+ELF QM+ G PD ITF+ VL+ACSH GLV++GR +FN+M
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
E Y I P +HY ++DL RAG+ A +I +P++ P++ ALL+ CRI+GN
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPG---APVWEALLAGCRIHGN 609
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+D+G + A L K+ ++ + LL+NIYA RW +V VR+ M++ VRK P CS IE
Sbjct: 610 MDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIE 669
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ +H F+V D H E+ +Y L+++
Sbjct: 670 VENKVHVFMVDDDVHPEVLSVYRYLEQLG 698
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 160/350 (45%), Gaps = 63/350 (18%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RD 285
N LL+MYCK L AR+LF+E+PN + I T++++ Y G LE R++F+ +P+ RD
Sbjct: 52 NRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ--GKWI 343
V + AMI GY A+ LFR M+ +PD F ++L+ EQ G+
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 344 HGYINENRITVDAVVATALIEMYAK--------CGLIEKALEIFYELREKDAASWTSIIC 395
+ V + V AL+ +Y K C + A ++F E+ ++D +WT++I
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 396 GLAMNGKINKALELF-----------SQMISG--------------------GAKPDDIT 424
G N +N A E+F + MISG G + DDIT
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL--EHYGC------LIDLLGRAGLLDE 476
+ ++SAC++ G G++ Y ++ +L H C LI L + +DE
Sbjct: 292 YTTIISACANVGSFQMGKQ-----VHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
A ++ +P N + + A+LS Y N E+ + E++ K+
Sbjct: 347 ARKIFYAMPVRN----IITWNAILSG---YVNAGRMEEAKSFFEEMPVKN 389
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/600 (37%), Positives = 340/600 (56%), Gaps = 54/600 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+KQ+ AQI + L Q+ KL+ + NL A ++F +Q P + N LI
Sbjct: 32 LNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNL--ALRVFNQVQEPNVHLCNSLI 89
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA---VGWLGEVKKGEKVHGYVVKT 117
+A A ++ +FS+++ G+ DNFTYPF+ KA + WL VK +H ++ K
Sbjct: 90 RAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVK---MMHNHIEKL 146
Query: 118 GLEFDTYVCNSIMDMYGVLG--KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
GL D YV N+++D Y G + + KLF++M ++D VSWN + G VK DA
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARK 206
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+F M Q ++L I N +LD Y
Sbjct: 207 LFDEMPQ---------------------RDL------------------ISWNTMLDGYA 227
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS--PVRDIVLWTAMI 293
+C +S A ELF++MP +N + W++MV GY G +E AR +FD+ P +++V WT +I
Sbjct: 228 RCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIII 287
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY + EA L +M L+ D +++L CA+ G L G H I ++ +
Sbjct: 288 AGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLN 347
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+A V AL++MYAKCG ++KA ++F ++ +KD SW +++ GL ++G +A+ELFS+M
Sbjct: 348 SNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G PD +TFI VL +C+H GL+DEG +F +M +VY + PK+EHYGCL+DLLGR G
Sbjct: 408 RKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGR 467
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA ++++ +P E N +I +GALL ACR++ VD+ +++ L K++ D +TLL
Sbjct: 468 LKEAIKVVQTMPMEPNVVI---WGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLL 524
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA+A WE V ++R KMK MGV K G SS+E+ IHEF V D SH + +IY ML
Sbjct: 525 SNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/609 (36%), Positives = 331/609 (54%), Gaps = 59/609 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMV---FCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q+KQ+ AQI + L + + KL+ C +L A F +Q P + YN
Sbjct: 33 LNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQ-----MLLATNAFNQVQYPNVHLYN 87
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG---WLGEVKKGEKVHGYV 114
+I+A + ++ F ++ G DNFT+PF+ K WL + E VH +
Sbjct: 88 TMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVI---ESVHAQI 144
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGK--ICNVKKLFDEM-PDKDVVSWNVSISGHVKCMRFE 171
K G D +V NS++D Y G I KKLF M +DVVSWN ISG K +E
Sbjct: 145 EKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYE 204
Query: 172 DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALL 231
+A VF M E I N +L
Sbjct: 205 EARKVFDEMP---------------------------------------EKDGISWNTML 225
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
D Y K G + +A +LFDEMP +NV+ W++MV GY G +E AR LFD+ PV+++V WT
Sbjct: 226 DGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTI 285
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+++G+ + EA++LF +M+ LK D ++++L CA+ G L G+ IH I N
Sbjct: 286 IVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNN 345
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
++ AL++MYAKCG + A ++F +++ KD SW +++ GLAM+G KALELF
Sbjct: 346 FKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFK 405
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+M G P+ +T IGVL AC+H GL+D+G R+F+TM Y + P++EHYGC++DLLGR
Sbjct: 406 RMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRK 465
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G L+EA LIR +P N II +G LL ACR++ V++ ++ L ++E DS +
Sbjct: 466 GRLEEAIRLIRNMPMAPNAII---WGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFS 522
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
+L+NIYA+A W V N R +M+ +G +K G SSIE+N +HEF V D SH + IY
Sbjct: 523 MLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQ 582
Query: 592 MLDRMAKTL 600
+++ + L
Sbjct: 583 VINGLRHEL 591
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/593 (36%), Positives = 339/593 (57%), Gaps = 33/593 (5%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F Q+N T N L+ T G L A ++FGS+ P ++N ++ FA+ F
Sbjct: 71 KLFDRMPQRNTFTWNSLISVLTKS--GFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRF 128
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+SL F K+ + +++ A L ++ G +VH V K+ D Y+ +++
Sbjct: 129 EESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSAL 188
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY G + +++F M ++++V+WN I+ + + +A++VF RM L PD
Sbjct: 189 IDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDS-GLEPD 247
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELF 247
E T+ S +SAC +L L+ G +IH + + +F ++GNAL+DMY KC ++EAR +F
Sbjct: 248 EVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D M +NV+ TSMVSGY ++ AR +F + R++V W A+I GY Q +EA+
Sbjct: 308 DRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
LFR ++ + W Y N + D V +LI+MY
Sbjct: 368 LFRLLK------------------------RESIWPTHYTFGNLLKSDIFVGNSLIDMYM 403
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG IE +F +++E+D SW +II G A NG +AL++F +M+ G KPD +T IG
Sbjct: 404 KCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIG 463
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
VL ACSH GLV+EGR +F +M E + + P +HY C++DLLGRAG L+EA+ LI +P
Sbjct: 464 VLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVN 522
Query: 488 NNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVT 547
+ ++ +G+LL+AC+++GN++MG+ A L +I+ +S + LL+N+YA RW DV
Sbjct: 523 PDAVV---WGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVV 579
Query: 548 NVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
VR+ M++ GV K PGCS IE+ +H FLV D SH K+IYS+L + + +
Sbjct: 580 RVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQM 632
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 161/303 (53%), Gaps = 1/303 (0%)
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
+P+ L +C ++ + +H R + + + N L+D+Y KC CL +AR+
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
LFD MP +N W S++S G L++A LF P D W +M++G+ Q +RF+E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ F +M +++ + L+ CA L L G +H ++++R + D + +ALI+M
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
Y+KCG + A E+F + E++ +W S+I NG ++ALE+F +M+ G +PD++T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
V+SAC+ + EG + + + + + L L+D+ + ++EA + ++
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 486 NEN 488
N
Sbjct: 312 IRN 314
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 309/505 (61%), Gaps = 12/505 (2%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+K + VH +++ GL+ D+Y+ N ++ G ++F + + ++ +N I G
Sbjct: 23 LKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHG 82
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEF 222
V F+++++++ MR+ L PD T L AC L + +LG ++H + + E
Sbjct: 83 LVLNDSFQESIEIYHSMRKE-GLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCES 141
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ +L+ +Y KCG + A ++FD++P KNV WT+++SGY+ G+ +A D+F R+
Sbjct: 142 DAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRAC 201
Query: 283 V-------RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+DIV W++MI GY EA+ LF +M +PD + +V +L CA+LG
Sbjct: 202 SVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLG 261
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
ALE G W ++ N + V+ TALI+MYAKCG ++ A E+F +R+KD W + I
Sbjct: 262 ALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAIS 321
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
GLAM+G + A LF QM G +PD TF+G+L AC+H GLVDEGR++FN+M V+ +
Sbjct: 322 GLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLT 381
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P++EHYGC++DLLGRAG LDEA +L++ +P E N I+ +GALL CR++ + + E +
Sbjct: 382 PEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIV---WGALLGGCRLHRDTQLVEGV 438
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
L +E +S + LL+NIY+++++WED +R M E G++KVPG S IE++G++HE
Sbjct: 439 LKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHE 498
Query: 576 FLVGDPSHSEMKEIYSMLDRMAKTL 600
FLVGD SH ++IY+ L + K L
Sbjct: 499 FLVGDTSHPLSEKIYAKLGELVKDL 523
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 215/458 (46%), Gaps = 79/458 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LK + A + ++GL ++ LNK++ F + GN Y+ +IF + P + +N +I
Sbjct: 23 LKHLKHVHAALLRLGLDEDSYLLNKVLRFSF--NFGNTNYSHRIFHQTKEPNIFLFNTMI 80
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
SF++S+ ++ +R+ G+SPD+FT+PF+ KA L + K G K+HG VVK G E
Sbjct: 81 HGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCE 140
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR- 179
D +V S++ +YG G I N K+FD++P+K+V +W ISG++ + +A+D+FRR
Sbjct: 141 SDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRA 200
Query: 180 -----------------MRQG--CNLMPDEG-----------------TVVSTLSACTAL 203
M QG N +P E +V L AC L
Sbjct: 201 CSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARL 260
Query: 204 KNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
LELG +++ E P++G AL+DMY KCG + A E+F M K+++ W + +
Sbjct: 261 GALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAI 320
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
SG G ++ A LF +M+ ++PD
Sbjct: 321 SGLAMSGHVKA-------------------------------AFGLFGQMEKSGIEPDGN 349
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENR----ITVDAVVATALIEMYAKCGLIEKALEI 378
V LL C G +++G+ Y N +T + ++++ + G +++A ++
Sbjct: 350 TFVGLLCACTHAGLVDEGR---QYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQL 406
Query: 379 FYEL-REKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ E +A W +++ G ++ + Q+I+
Sbjct: 407 VKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIA 444
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 107/270 (39%), Gaps = 34/270 (12%)
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M + L I + L G +L+ K +H + + D+ + ++ G
Sbjct: 1 MSSLILNKSAHIKIRLFQG---FNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGN 57
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
+ IF++ +E + + ++I GL +N +++E++ M G PD TF +L A
Sbjct: 58 TNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKA 117
Query: 432 CS-----------HGGLVDEG---RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
C+ HG +V G F NT L+ L G+ G +D A
Sbjct: 118 CARLLDSKLGIKLHGLVVKAGCESDAFVNT---------------SLVSLYGKCGFIDNA 162
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
++ IP +N + + + +DM + ++ + + KD + + Y
Sbjct: 163 FKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGY 222
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
AS ++ ++ KM G R P C ++
Sbjct: 223 ASNGLPKEALDLFFKMLNEGFR--PDCYAM 250
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/567 (36%), Positives = 334/567 (58%), Gaps = 60/567 (10%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+ L+Q+ A+I + GL Q+ +++ + C S N Y +F + SP + +N IK
Sbjct: 39 STLEQVHARIIRKGLHQDHFLISQFLTLCN--SLSNFSYTTSVFNGVSSPSTVLWNTYIK 96
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ S ++ LF +++ PD FTYP + KA + VK+G HG V+ G+
Sbjct: 97 GYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGG 156
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D +V S++D+YG G+I +K+FDEM +++VVSW I+G+ F D V+ R
Sbjct: 157 DVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYAS---FSDLVEA----R 209
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+ + MP++ V NA++ Y KCG L
Sbjct: 210 KLFDEMPEKNAV--------------------------------SWNAIISGYVKCGDLR 237
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
AR++FDEMP++NV+ +T+M+ GY G + AR +F+ +P RD+V W+A+I
Sbjct: 238 SARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALI-------- 289
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD-AVVAT 360
FR +KPD+FI+V+L++ C+Q+G+LE KW+ Y+ ++ I V A V
Sbjct: 290 -------FRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA 342
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+M AKCG +++A ++F E+ ++D S+ S++ GL+++G +A+ LFS+M++ G P
Sbjct: 343 ALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTP 402
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DD+ F +L+ACS GLVDEG +F +M Y I P +HY C++DLLGRAG L EA EL
Sbjct: 403 DDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYEL 462
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
++ +P E + +GALL AC+++ ++++GE +A L ++E +++ + LL+NIYA+A
Sbjct: 463 LKSMPVEPH---AGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAA 519
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+W DV+ +R KM+E G+RK+PGCS I
Sbjct: 520 EQWLDVSLLRNKMRERGIRKIPGCSWI 546
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/590 (36%), Positives = 332/590 (56%), Gaps = 41/590 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVF--CTHPSHGNLLYAEKIFGSIQSPCLLAYNL 58
+ L +I A + G QN KL++ C P+ + YA K+F + + +N
Sbjct: 42 LPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPT---MDYARKMFDQMPKRDVFLWNT 98
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
LI+ +A G ++L L+S + G+ PDN+T+PFV ++ L +++G++VH +VK G
Sbjct: 99 LIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHG 158
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ D +V +S++ MY G+ ++ +F EM +++VSW I+G+V+ F++ + VFR
Sbjct: 159 FDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFR 218
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKC 237
M G P+ T+VS L AC L+ L LGK IH Y I ++ + NAL+ +Y KC
Sbjct: 219 EM-VGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKC 277
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G +E AR LFD V+++V W AMI Y
Sbjct: 278 G-------------------------------NVETARSLFDGMVVQNLVSWNAMIAAYE 306
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q N AV LFR MQ ++ D +V++++ CA LGAL G+W+H + + ++
Sbjct: 307 QNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVS 366
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ALI+MYAKCG I+ A E+F L + SWTS+I A +G AL+LFS+M G
Sbjct: 367 ITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEG 426
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
KP+ TF V +AC H GLV+EGR+ F +M Y I P +EH C++DLLGRAG L EA
Sbjct: 427 VKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEA 486
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
E I K+P E + V ++GALL +CRI+ N+++ E +A L ++ + +F+ L++NIY
Sbjct: 487 YEFIDKMPVEPD---VSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIY 543
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
A A RWED +R+ M+E ++K+PG S +E+N H FL G S S ++
Sbjct: 544 AEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQSSLR 593
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/570 (38%), Positives = 336/570 (58%), Gaps = 44/570 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP-CLLAYNLLIKA 62
KQIQ Q+ + ++ +NK++ F S Y+ I SI+S +YN L+ +
Sbjct: 22 FKQIQTQLISRDILRDELFINKVVTFLG-KSADFATYSSVILHSIRSVLSSFSYNTLLSS 80
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+A R ++ ++ G SPD FT+P VFKA G +++G+++HG V K G D
Sbjct: 81 YAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGTVTKMGFYDD 140
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
YV NS++ YGV G+ N K+FD+MP +DVVSW I+G + +++A+D F +M
Sbjct: 141 IYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM-- 198
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLS 241
++ P+ T V L + + L LGK IH I + + GNAL+DMY KC LS
Sbjct: 199 --DVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLS 256
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+A +F G+L+K +D V W +MI+G V R
Sbjct: 257 DAMTVF---------------------GELQK----------KDKVSWNSMISGLVHCER 285
Query: 302 FDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+EA+ LF MQ +KPD IL ++L+ CA LGA++ G+W+H Y+ I D + T
Sbjct: 286 SNEAIELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGT 345
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
A+++MYAKCG IE AL+IF +R K+ +W +++ GLA++G +++L F +M+ G KP
Sbjct: 346 AIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKP 405
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTM-TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
+ +TF+ +L+AC H GLVDEGRR+F+ M T Y + PKLEHYGCLIDL RAGLLDEA E
Sbjct: 406 NLVTFLAILNACCHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALE 465
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNV-DMGEKLAALLEKIESKDSSFHTLLANIYA 538
LI+ +P + + V + GA+LSAC+ G + ++ +++ ++E +DS + LL+NI+A
Sbjct: 466 LIKAMPVKPD---VRICGAVLSACKSRGTLMELPKEILDSFLEMEFEDSGVYVLLSNIFA 522
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+ RW+DV+ +R+ MK G+ KVPG SSIE
Sbjct: 523 ANRRWDDVSRIRRLMKVKGISKVPGSSSIE 552
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 310/490 (63%), Gaps = 10/490 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+K+H ++VK L ++ ++D+ L + +F ++ + +V S+N I +
Sbjct: 24 KKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLENPNVFSYNAIIRTYTHN 83
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--- 224
+ A+ VF +M + PD+ T + +C L LG+++H ++ +F P
Sbjct: 84 HKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHV---CKFGPKTH 140
Query: 225 -IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
I NAL+DMY KCG +S A ++++EM ++ + W S++SG+V GQ++ AR++FD P
Sbjct: 141 AITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDEMPC 200
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
R IV WT MINGY + + +A+ +FREMQ++ ++PD+ ++++L CAQLGALE GKWI
Sbjct: 201 RTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWI 260
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H Y ++ +A V AL+EMYAKCG I++A +F ++ EKD SW+++I GLA +GK
Sbjct: 261 HKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHGKG 320
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
A+ +F M G P+ +TF+GVLSAC+H GL +EG R+F+ M Y ++P++EHYGC
Sbjct: 321 YAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYGC 380
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
L+DLLGR+G +++A + I K+P + + + +LLS+CRI+ N+++ L K+E
Sbjct: 381 LVDLLGRSGQVEQALDTILKMPMQPDS---RTWNSLLSSCRIHHNLEIAVVAMEQLLKLE 437
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
++S + LLANIYA ++WE V+NVR+ ++ ++K PGCS IE+N ++ EF+ GD S
Sbjct: 438 PEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVNNLVQEFVSGDDSK 497
Query: 584 SEMKEIYSML 593
+E++ +L
Sbjct: 498 PFSQEVFWIL 507
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 220/449 (48%), Gaps = 69/449 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LK+I A I ++ L Q+ + K++ C + SH + YA IF +++P + +YN +I
Sbjct: 20 IAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVD--YATMIFQQLENPNVFSYNAII 77
Query: 61 KAFAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ + ++ +F++ L + SPD FT+PFV K+ L + G++VH +V K G
Sbjct: 78 RTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGP 137
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ N+++DMY G + ++++EM ++D VSWN ISGHV+ + + A +VF
Sbjct: 138 KTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDE 197
Query: 180 M----------------RQGC--------------NLMPDEGTVVSTLSACTALKNLELG 209
M R GC + PDE +V+S L AC L LE+G
Sbjct: 198 MPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVG 257
Query: 210 KEIHRYINQELEFTPIMG--NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
K IH+Y +++ F G NAL++MY KCGC+ EA LF++M K+VI W++M+ G N
Sbjct: 258 KWIHKY-SEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLAN 316
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G+ GY A+ +F +MQ + P+ V +
Sbjct: 317 HGK------------------------GYA-------AIRVFEDMQKAGVTPNGVTFVGV 345
Query: 328 LTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REK 385
L+ CA G +G ++ + + L+++ + G +E+AL+ ++ +
Sbjct: 346 LSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQP 405
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMI 414
D+ +W S++ ++ + A+ Q++
Sbjct: 406 DSRTWNSLLSSCRIHHNLEIAVVAMEQLL 434
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 329/582 (56%), Gaps = 45/582 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQS-PCLLAYNLLIKA 62
L+QI Q F I P L S + Y+ IF I P A+N++++A
Sbjct: 37 LQQIHTQ-FTIHSIHKPNHL-----LSQSISLKDFTYSTLIFSHITPHPNDYAFNIMLRA 90
Query: 63 FAKK-GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ +L L+ +++ +SP+NFT+PFVF A L E++ H V K GL+
Sbjct: 91 TTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDN 150
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D + NS++ MY G+ +K+FDE+ +KD+VSWN +SG+ K +AV+VF R+R
Sbjct: 151 DHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLR 210
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+ PDE ++VS L AC L +LELG+ + ++ + ++ +G+AL+ MY KC
Sbjct: 211 EESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKC--- 267
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
G+L +R +FD P RD + W A I+ Y Q
Sbjct: 268 ----------------------------GELVSSRRIFDGMPSRDFITWNAAISAYAQNG 299
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
DEA++LF M+ + P+K L A+L+ CA +GAL+ GK + Y + D VAT
Sbjct: 300 MADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVAT 359
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS--GGA 418
ALI+MYAKCG +E A +F ++ K+ ASW ++I LA +GK +AL LF +M G A
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSA 419
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+DITF+ +LSAC H GLVDEG R F+ M+ ++ + PK+EHY C++DLL RAG L EA
Sbjct: 420 RPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAW 479
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
++I K+P + + + + GAL SAC+ NVD+GE++ +L +++ +S + + + IY
Sbjct: 480 DVIEKMPEKPDNVTL---GALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYE 536
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+ N W+D +R M+E GV K PGCS IE+ + EFL GD
Sbjct: 537 NLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGD 578
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/498 (39%), Positives = 313/498 (62%), Gaps = 6/498 (1%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++ + +K+H +VVK L ++ ++D LG + LF ++ ++ ++N I
Sbjct: 22 KITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIR 81
Query: 163 GHVKCMRFEDAVDVFRRM--RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
+ A+ VF +M ++ PD+ T + +CT + LG ++H + +
Sbjct: 82 TYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFG 141
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+F I NAL+DMY K G L+ A ++F+EM +++VI W S++ GYV GQ+ AR+LFD
Sbjct: 142 ADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFD 201
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
PVR IV WT MI GY + + +A+ +FREMQ++ ++PD+ ++A+L CAQLGALE
Sbjct: 202 DMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEV 261
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GKWIH Y ++N + ALIEMYAKCG I++A +F +L EKD SW+++I GLA
Sbjct: 262 GKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLAN 321
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+GK +A++LF +M P++ITF+GVL ACSH GL DEG ++F+ M+ Y I+P++E
Sbjct: 322 HGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIE 381
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGCLIDLLGR+G L +A + I K+P + + I + +LLS+CRI+ N+ + L
Sbjct: 382 HYGCLIDLLGRSGCLGQALDTISKMPIKPDSRI---WNSLLSSCRIHRNLQIAVIAVKQL 438
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E ++S + LLAN+YA +WEDV+N+R+ ++ ++K PG SSIE+N ++ EF+
Sbjct: 439 MELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSS 498
Query: 580 DPSHSEMKEIYSMLDRMA 597
D S +E++ +L+ +A
Sbjct: 499 DDSKPFSQEVFWILEGLA 516
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 217/452 (48%), Gaps = 73/452 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+TQLK+I A + ++ L Q+ + K++ C + H + YA +F + P + YN +I
Sbjct: 23 ITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGH--VSYATLLFKQLLHPNIFTYNAII 80
Query: 61 KAFAKKGSFRKSLLLFSKL---RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+ +A ++ +F ++ V PD FT+PFV K+ + + G +VHG V K
Sbjct: 81 RTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKF 140
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR-------- 169
G +F N+++DMY G + N K+F+EM +DV+SWN I G+VK +
Sbjct: 141 GADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELF 200
Query: 170 -----------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
+ DA+DVFR M Q + PDE ++++ L AC L L
Sbjct: 201 DDMPVRTIVSWTTMITGYGRMGCYGDALDVFREM-QMVGIEPDEISIIAVLPACAQLGAL 259
Query: 207 ELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
E+GK IH Y ++ L T I NAL++MY KCGC+ EA LFD++ K+VI W++M+ G
Sbjct: 260 EVGKWIHMYADKNGFLRKTGIC-NALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGG 318
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
N G+ GY EA+ LF EM +R+ P++
Sbjct: 319 LANHGK------------------------GY-------EAIQLFEEMCKVRVAPNEITF 347
Query: 325 VALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ +L C+ G ++G K+ I + LI++ + G + +AL+ ++
Sbjct: 348 LGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMP 407
Query: 384 EK-DAASWTSIICGLAMNGKINKALELFSQMI 414
K D+ W S++ ++ + A+ Q++
Sbjct: 408 IKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLM 439
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/520 (38%), Positives = 301/520 (57%), Gaps = 47/520 (9%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
V P ++ + ++ GE + GE H ++K G E+D + ++D Y +G + K
Sbjct: 6 VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM--RQGCNLMPDEGTVVSTLSACT 201
++F MP +DVV+ N IS K E+A ++F M R C+
Sbjct: 66 RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSW--------------- 110
Query: 202 ALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
N+++ YCK G ++ AR +FD P K+V+ W ++
Sbjct: 111 --------------------------NSMITCYCKLGDINSARLMFDCNPVKDVVSWNAI 144
Query: 262 VSGYVNCGQLEKARDLFD-RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+ GY QL A++LF R+ V W MI+ YVQ F A+++F++MQ +KP
Sbjct: 145 IDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPT 204
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+ +V+LL+ CA LGAL+ G+WIHGYI R+ +D V+ ALI+MY KCG +E A+++F+
Sbjct: 205 EVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFH 264
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
L K+ W SII GL MNG+ +A+ F M G KPD +TF+G+LS CSH GL+
Sbjct: 265 GLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSA 324
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
G+R+F+ M VY ++P +EHYGC++DLLGRAG L EA ELIR +P + N +++ G+LL
Sbjct: 325 GQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVL---GSLL 381
Query: 501 SACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
AC+I+ + +GE++ L +++ D + L+N+YAS +RW+DV R+ M + GV K
Sbjct: 382 RACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHK 441
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PGCSSIE+N I+HEF+ GD SH + +I + LD +AK L
Sbjct: 442 TPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKEL 481
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 181/381 (47%), Gaps = 45/381 (11%)
Query: 8 QAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKG 67
QI ++G + + L+ F + G+L A+++F + ++A N +I A +K G
Sbjct: 33 HCQIMKMGFEYDMILQTGLLDF--YAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHG 90
Query: 68 SFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCN 127
++ LF + ER ++ ++ + LG++ + D N
Sbjct: 91 YVEEARNLFDNMTER----NSCSWNSMITCYCKLGDINSAR----LMFDCNPVKDVVSWN 142
Query: 128 SIMDMYGVLGKICNVKKLFDEMPD-KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
+I+D Y ++ ++LF M ++ V+WN IS +V+C F A+ +F++M Q N+
Sbjct: 143 AIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQM-QSENV 201
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARE 245
P E T+VS LSAC L L++G+ IH YI + L+ ++GNAL+DMYCKCG L A +
Sbjct: 202 KPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAID 261
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+F + KN+ CW S++ G +NG R +EA
Sbjct: 262 VFHGLSRKNIFCWNSIIVGL--------------------------GMNG-----RGEEA 290
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIE 364
+A F M+ +KPD V +L+GC+ G L G ++ + + +++
Sbjct: 291 IAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVD 350
Query: 365 MYAKCGLIEKALEIFYELREK 385
+ + G +++ALE+ + K
Sbjct: 351 LLGRAGYLKEALELIRAMPMK 371
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 328/533 (61%), Gaps = 47/533 (8%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLG-----KICNVKKLFDEMPDKDVVSWNVSIS 162
++ H +++TG D+Y+ S++ Y + + ++FD + +V WN I
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI------ 216
++ A+ ++ M + P++ T + L AC+ + G ++H ++
Sbjct: 112 VCIENNEPFKAILLYYEMVVA-HSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLG 170
Query: 217 ---------------------------NQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
++ E + NA++D Y + G + ARELF+
Sbjct: 171 GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEG 230
Query: 250 MPNKNVI-CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
MP++++I W +M+SG+ CG +E AR+ FD RD + W+AMI+GY+Q F EA+ +
Sbjct: 231 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 290
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F +MQ +++P KF+L ++L+ CA LGAL+QG+WIH Y N I +D V+ T+L++MYAK
Sbjct: 291 FHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAK 350
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
CG I+ A E+F ++ K+ +SW ++I GLAM+G+ A++LFS+M P++ITF+GV
Sbjct: 351 CGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGV 407
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L+AC+HGGLV +G FN+M + Y ++P++EHYGC++DLLGRAGLL EAE+++ IP E
Sbjct: 408 LNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEP 467
Query: 489 NEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTN 548
+ +GALL ACR +GNV++GE++ +L ++E ++S +TLL+NIYA A RWE+V
Sbjct: 468 TPAV---WGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGE 524
Query: 549 VRQKMKEMGVRKVPGCSSIEI-NGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
VR+ MKE G++ PG S I++ G +H+F++GD SH ++K+IY MLD++ + L
Sbjct: 525 VRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERL 577
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 224/567 (39%), Gaps = 149/567 (26%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAE---KIFGSIQSPCLLAYN 57
+ LKQ A I + G Q+ L+ + S L E ++F ++ P + +N
Sbjct: 48 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 107
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+IK + K++LL+ ++ P+ +TYP V KA G V +G +VH ++VK
Sbjct: 108 CMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKH 167
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKK--------------------------------L 145
GL D ++ +S + MY G++ ++ L
Sbjct: 168 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAREL 227
Query: 146 FDEMPDKDVVS-WNVSISGHVKCMRFEDAVDVFRRMR----------------QGC---- 184
F+ MPD+ ++S WN ISG +C E A + F M+ +GC
Sbjct: 228 FEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEA 287
Query: 185 ----------NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDM 233
+ P + + S LSAC L L+ G+ IH Y + ++ ++G +L+DM
Sbjct: 288 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 347
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG + A E+F++M NK V W +M+ G G+ E A DLF +
Sbjct: 348 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSK------------- 394
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+ + P++ V +L CA HG
Sbjct: 395 ---------------------MDIYPNEITFVGVLNACA-----------HG-------- 414
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELR-----EKDAASWTSIICGLAMNGKINKALE 408
GL++K L IF +R E + I+ L G + +A +
Sbjct: 415 ----------------GLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 458
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE-HYGCLIDL 467
+ S + + +P + +L AC G V+ G R + E ++P+ Y L ++
Sbjct: 459 VVSSIPT---EPTPAVWGALLGACRKHGNVELGERVGKILLE---LEPQNSGRYTLLSNI 512
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVP 494
+AG +E E +RK+ E P
Sbjct: 513 YAKAGRWEEVGE-VRKLMKERGIKTTP 538
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 154/317 (48%), Gaps = 18/317 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A + F ++ ++++ +I + ++G F ++L +F ++++ + P F P V
Sbjct: 251 GMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVL 310
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + +G +H Y + ++ D + S++DMY G+I ++F++M +K+V
Sbjct: 311 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 370
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G R EDA+D+F +M ++ P+E T V L+AC ++ G I
Sbjct: 371 SWNAMIGGLAMHGRAEDAIDLFSKM----DIYPNEITFVGVLNACAHGGLVQKGLTIFNS 426
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNKNV-ICWTSMVSGYVNCGQLE 272
+ +E P + + ++D+ + G L+EA ++ +P + W +++ G +E
Sbjct: 427 MRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVE 486
Query: 273 ----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
+ L + P ++ +T + N Y + R++E ++ +L ++ I
Sbjct: 487 LGERVGKILLELEP-QNSGRYTLLSNIYAKAGRWEEV------GEVRKLMKERGIKTTPG 539
Query: 329 TGCAQLGALEQGKWIHG 345
T LG E K+I G
Sbjct: 540 TSIIDLGRGEVHKFIIG 556
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/606 (37%), Positives = 357/606 (58%), Gaps = 17/606 (2%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVF-CTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
M Q QI A I G N L F + S +L ++ +F I +P + +N +
Sbjct: 27 MQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPDIFLWNAI 86
Query: 60 IKAFAKKGSF-RKSLLLFSKLRERGVSPDNFTYPFVFKAVG--WLGEVKKGEKVHGYVVK 116
IKA+++ S + LF + V PD+FT+PF+ KA + + G +VH +V++
Sbjct: 87 IKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQVHCHVLR 146
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G D +V N++++ Y G + N K+FDE +D VS+N I+G + V
Sbjct: 147 NGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRV 206
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF---TPIMGNALLDM 233
F MR C + PDE T V+ LS C+ L++ +G+++H + +EL ++ N L+DM
Sbjct: 207 FGEMRGVC-VRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDM 265
Query: 234 YCKCGCLSEARELFDEM-PNKNVIC-WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
Y KCG L A + + P K+V+ WTS+VS Y G+++ AR LFD+ RD+V WTA
Sbjct: 266 YAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTA 325
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH-GYINEN 350
MI+GY F EA+ LF +++ + +KPD+ +VA L+ CA+LGALE G+ IH Y EN
Sbjct: 326 MISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGEN 385
Query: 351 -RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS--WTSIICGLAMNGKINKAL 407
+++ +A+++MYAKCG I+ AL++F + + + + SII GLA +G+ A
Sbjct: 386 WTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAK 445
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LF +M G KPD+ITF+ VLSAC H GLVD G++ F +M VY + P++EHYGC++DL
Sbjct: 446 NLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDL 505
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG LDEA LI K+P + N +I + ALLSAC+++G+V + + L +++
Sbjct: 506 LGRAGHLDEAHRLILKMPFKANAVI---WRALLSACKVHGDVALARVASYELVELQHDHG 562
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ + +L+N+ + ++ ++ ++R+ + +G++K PG S +E+N +H+FL GD SH E K
Sbjct: 563 AGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEAK 622
Query: 588 EIYSML 593
ML
Sbjct: 623 TTELML 628
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 330/582 (56%), Gaps = 45/582 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQS-PCLLAYNLLIKA 62
L+QI Q F I P L + S + Y+ IF I P A+N++++A
Sbjct: 37 LQQIHTQ-FTIHSIHKPNHLLSQSI-----SLKDFTYSTLIFSHITPHPNDYAFNIMLRA 90
Query: 63 FAKK-GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ +L L+ +++ +SP+NFT+PFVF A L E++ H V K GL+
Sbjct: 91 TTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDN 150
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D + NS++ MY G+ +K+FDE+ +KD+VSWN +SG+ K +AV+VF R+R
Sbjct: 151 DHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLR 210
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+ PDE ++VS L AC L +LELG+ + ++ + ++ +G+AL+ MY KC
Sbjct: 211 EESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKC--- 267
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
G+L +R +FD P RD + W A I+ Y Q
Sbjct: 268 ----------------------------GELVSSRRIFDGMPSRDFITWNAAISAYAQNG 299
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
DEA++LF M+ + P+K L A+L+ CA +GAL+ GK + Y + D VAT
Sbjct: 300 MADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVAT 359
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS--GGA 418
ALI+MYAKCG +E A +F ++ K+ ASW ++I LA +GK +AL LF +M G A
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSA 419
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+DITF+ +LSAC H GLVDEG R F+ M+ ++ + PK+EHY C++DLL RAG L EA
Sbjct: 420 RPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAW 479
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
++I K+P + + + + GAL SAC+ NVD+GE++ +L +++ +S + + + IY
Sbjct: 480 DVIEKMPEKPDNVTL---GALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYE 536
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+ N W+D +R M+E GV K PGCS IE+ + EFL GD
Sbjct: 537 NLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGD 578
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/601 (33%), Positives = 349/601 (58%), Gaps = 12/601 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q ++I ++F GL N L+ + G++ A+++F S+Q+ ++N +I
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTM--YARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A ++ G + +L +F +++ V P++ TY V + +G K+H +V G +
Sbjct: 181 LAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V ++++MYG G +++FD+M +D+VSWNV I +V F +A+++++++
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
+ T VS L AC+++K L G+ +H +I + L+ + AL++MY KCG
Sbjct: 300 DME-GFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCG---QLEKARDLFDRSPVRDIVLWTAMINGY 296
L EAR++F+ M N++ + W++++ Y + G KAR +FDR RD + W AMI Y
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTY 418
Query: 297 VQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
VQ A+ +FREM LKPD +A+L CA LG L + K +H I+E+ + +
Sbjct: 419 VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESN 478
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
VV LI MYA+CG +E+A +F +EK SWT+++ + G+ +AL+LF +M
Sbjct: 479 VVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDL 538
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G KPDD+T+ +L C+HGG +++G R+F M E++ + P +H+ ++DLLGR+G L
Sbjct: 539 EGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLF 598
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+A+EL+ +P E + + + L+ACRI+G +++GE A + +++ ++ + ++N
Sbjct: 599 DAKELLESMPFEPDPVA---WMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSN 655
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYA+ WE V +VR+KM+E G++K+PG S IE++G +HEF G H EI L R
Sbjct: 656 IYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTR 715
Query: 596 M 596
+
Sbjct: 716 L 716
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 268/539 (49%), Gaps = 85/539 (15%)
Query: 37 NLLYAEKIFGSI--QSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+L+ A +F S+ + ++++N +I A+A+ G ++L+L+ ++ +G+ D+ T+ V
Sbjct: 57 SLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSV 116
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A L + G ++H V +GL+ + N+++ MY G + + K++F + +D
Sbjct: 117 LGACSSLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDE 173
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH- 213
SWN I H + + A+ +F+ M+ C++ P+ T ++ +S + + L G++IH
Sbjct: 174 TSWNAVILAHSQSGDWSGALRIFKEMK--CDVKPNSTTYINVISGFSTPEVLPEGRKIHA 231
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
+ + ++ AL++MY KCG EARE+FD+M ++++ W M+ YV
Sbjct: 232 EIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYV------- 284
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
+NG F EA+ L++++ + K K V++L C+
Sbjct: 285 -------------------LNG-----DFHEALELYQKLDMEGFKRTKATFVSILGACSS 320
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
+ AL QG+ +H +I E + + VATAL+ MYAKCG +E+A ++F ++ +DA +W+++
Sbjct: 321 VKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTL 380
Query: 394 ICGLAMNG------KINK----------------------------ALELFSQMI-SGGA 418
I A NG K K A+++F +M + G
Sbjct: 381 IGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGL 440
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD +TFI VL AC+ G + E + ++E +++ + LI++ R G L+EAE
Sbjct: 441 KPDAVTFIAVLEACASLGRLSEVKALHAQISES-ELESNVVVTNTLINMYARCGSLEEAE 499
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGN----VDMGEKLAALLEKIESKDSSFHTLL 533
L E V + A+++A YG +D+ +++ LE ++ D ++ ++L
Sbjct: 500 RLFAAA----KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD--LEGVKPDDVTYTSIL 552
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+PD + +L C+ G + +G+ +H I +R D +V ALI MY KC + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 378 IFYEL--REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F + R+++ SW ++I A NG +AL L+ +M G D +TF+ VL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 436 GLVDEGR----RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ +GR R F + + +Q L+ + R G + +A+ + + + +
Sbjct: 123 --LAQGREIHNRVFYSGLDSFQSLAN-----ALVTMYARFGSVGDAKRMFQSLQTRD 172
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/601 (33%), Positives = 350/601 (58%), Gaps = 12/601 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q ++I ++F GL N L+ + G++ A+++F S+Q+ ++N +I
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTM--YARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A ++ G + +L +F +++ + P++ TY V + +G K+H +V G +
Sbjct: 181 LAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V ++++MYG G +++FD+M +D+VSWNV I +V+ F +A+++++++
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
+ T VS L AC+++K L G+ +H +I + L+ + AL++MY KCG
Sbjct: 300 DME-GFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCG---QLEKARDLFDRSPVRDIVLWTAMINGY 296
L EAR++F+ M N++ + W++++ Y + G KAR +FDR RD + W AMI Y
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTY 418
Query: 297 VQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
VQ A+ +FREM LKPD +A+L CA LG L + K +H I+E+ + +
Sbjct: 419 VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESN 478
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
VV LI MYA+CG +E+A +F +EK SWT+++ + G+ +AL+LF +M
Sbjct: 479 VVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDL 538
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G KPDD+T+ +L C+HGG +++G R+F M E++ + P +H+ ++DLLGR+G L
Sbjct: 539 EGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLF 598
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+A+EL+ +P E + + + L+ACRI+G +++GE A + +++ ++ + ++N
Sbjct: 599 DAKELLESMPFEPDPVA---WMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSN 655
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYA+ WE V +VR+KM+E G++K+PG S IE++G +HEF G H EI L R
Sbjct: 656 IYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTR 715
Query: 596 M 596
+
Sbjct: 716 L 716
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 266/539 (49%), Gaps = 85/539 (15%)
Query: 37 NLLYAEKIFGSI--QSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+L+ A +F S+ + ++++N +I A+A+ G ++L+L+ ++ +G+ D+ T+ V
Sbjct: 57 SLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSV 116
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A L + G ++H V +GL+ + N+++ MY G + + K++F + +D
Sbjct: 117 LGACSSLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDE 173
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH- 213
SWN I H + + A+ +F+ M+ C++ P+ T ++ +S + + L G++IH
Sbjct: 174 TSWNAVILAHSQSGDWSGALRIFKEMK--CDMKPNSTTYINVISGFSTPEVLPEGRKIHA 231
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
+ + ++ AL++MY KCG EARE+FD+M ++++ W M+ YV G
Sbjct: 232 EIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGD--- 288
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
F EA+ L++++ + K K V++L C+
Sbjct: 289 ----------------------------FHEALELYQKLDMEGFKRTKATFVSILGACSS 320
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
+ AL QG+ +H +I E + + VATAL+ MYAKCG +E+A ++F ++ +DA +W+++
Sbjct: 321 VKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTL 380
Query: 394 ICGLAMNG------KINK----------------------------ALELFSQMI-SGGA 418
I A NG K K A+++F +M + G
Sbjct: 381 IGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGL 440
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD +TFI VL AC+ G + E + ++E +++ + LI++ R G L+EAE
Sbjct: 441 KPDAVTFIAVLEACASLGRLSEVKALHAQISES-ELESNVVVTNTLINMYARCGSLEEAE 499
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGN----VDMGEKLAALLEKIESKDSSFHTLL 533
L E V + A+++A YG +D+ +++ LE ++ D ++ ++L
Sbjct: 500 RLFAAA----KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD--LEGVKPDDVTYTSIL 552
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+PD + +L C+ G + +G+ +H I +R D +V ALI MY KC + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 378 IFYEL--REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F + R+++ SW ++I A NG +AL L+ +M G D +TF+ VL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 436 GLVDEGR----RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ +GR R F + + +Q L+ + R G + +A+ + + + +
Sbjct: 123 --LAQGREIHNRVFYSGLDSFQSLAN-----ALVTMYARFGSVGDAKRMFQSLQTRD 172
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 335/574 (58%), Gaps = 10/574 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +IF ++ ++++ +I+A A+ ++ L+ K+ + G+SP+ T+ +
Sbjct: 228 GEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLL 287
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ + +G ++H ++ + GLE D V N+++ MY I + ++ FD M +DV+
Sbjct: 288 NSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVI 347
Query: 156 SWNVSISGHVKC-----MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
SW+ I+G+ + ++ + RMR+ + P++ T +S L AC+ LE G+
Sbjct: 348 SWSAMIAGYAQSGYQDKESLDEVFQLLERMRRE-GVFPNKVTFMSILKACSVHGALEQGR 406
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+IH I++ E + A+ +MY KCG + EA ++F +M NKNV+ W S+++ Y+ CG
Sbjct: 407 QIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCG 466
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
L A +F R++V W MI GY Q + L M++ +PD+ ++++L
Sbjct: 467 DLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILE 526
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C L ALE+GK +H + + D VVAT+LI MY+KCG + +A +F ++ +D +
Sbjct: 527 ACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVA 586
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W +++ G +G +A++LF +M+ P++ITF V+SAC GLV EGR F M
Sbjct: 587 WNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQ 646
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
E ++++P +HYGC++DLLGRAG L EAEE I+++P E + + ++ ALL AC+ + NV
Sbjct: 647 EDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPD---ISVWHALLGACKSHDNV 703
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+ E A + ++E ++S + L+NIYA A RW+D T VR+ M + G++K G SSIEI
Sbjct: 704 QLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEI 763
Query: 570 NGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+G IH F+ D +H E+ I++ L+ + K + ++
Sbjct: 764 DGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEA 797
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/554 (25%), Positives = 258/554 (46%), Gaps = 77/554 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K + Q+ ++GL + N L+ F + G++ E++F + ++ ++ +I A+A
Sbjct: 98 KMVHKQLDELGLAIDIYLGNSLINF--YSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYA 155
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K+ F ++++ + P+ T+ + KA ++K ++H V +G+E D
Sbjct: 156 GNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVA 215
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V +++ MY G+I ++F +M +++VVSW I + + + +A +++ +M Q
Sbjct: 216 VATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQA- 274
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEA 243
+ P+ T VS L++C + L G+ IH +I++ LE ++ NAL+ MYCKC C+ +A
Sbjct: 275 GISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDA 334
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
RE FD M ++VI W++M++GY +GY D
Sbjct: 335 RETFDRMSKRDVISWSAMIAGYAQ--------------------------SGYQDKESLD 368
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
E L M+ + P+K +++L C+ GALEQG+ IH I++ D + TA+
Sbjct: 369 EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIF 428
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSI------------------------------ 393
MYAKCG I +A ++F ++ K+ +W S+
Sbjct: 429 NMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNL 488
Query: 394 -ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
I G A +G I K EL S M G +PD +T I +L AC ++ G+ +
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGK-----LVHAE 543
Query: 453 QIQPKLEH----YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
++ LE LI + + G + EA + KI N + + A+L+ YG
Sbjct: 544 AVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRD----TVAWNAMLAG---YGQ 596
Query: 509 VDMGEKLAALLEKI 522
+G + L +++
Sbjct: 597 HGIGPEAVDLFKRM 610
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 255/530 (48%), Gaps = 50/530 (9%)
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G ++++ L +++RG+ ++ TY + + L + G+ VH + + GL D Y
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ NS+++ Y G + +V+++F M +DVV+W+ I+ + A D F RM+
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDA- 173
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEA 243
N+ P+ T +S L AC LE +EIH + +E + AL+ MY K
Sbjct: 174 NIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSK------- 226
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
CG++ A ++F + R++V WTA+I Q + +
Sbjct: 227 ------------------------CGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLN 262
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA L+ +M + P+ V+LL C AL +G+ IH +I+E + D VVA ALI
Sbjct: 263 EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG-----KINKALELFSQMISGGA 418
MY KC I+ A E F + ++D SW+++I G A +G +++ +L +M G
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEA 477
P+ +TF+ +L ACS G +++GR+ +++V ++ L+ + ++ + G + EA
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQ--TAIFNMYAKCGSIYEA 440
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
E++ K+ N+N V + +LL+ G++ EK + ++ +++ L+ Y
Sbjct: 441 EQVFSKMENKN----VVAWASLLTMYIKCGDLTSAEK---VFSEMSTRNVVSWNLMIAGY 493
Query: 538 ASANRWEDVTNVRQKMKEMGVR--KVPGCSSIEINGIIHEFLVGDPSHSE 585
A + V + MK G + +V S +E G + G H+E
Sbjct: 494 AQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAE 543
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/570 (37%), Positives = 331/570 (58%), Gaps = 28/570 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LK++ I ++ L+KL+ FC G++ YA+ + I +P + +N +I
Sbjct: 17 MRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIHNPSVYIWNSMI 76
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ F + R S+LL+ ++ E G SPD+FT+PFV KA + + G+ +H +VK+G E
Sbjct: 77 RGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIHSCIVKSGFE 136
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y ++ MY + + K+FD +P +VV+W I+G+VK + +A+ VF M
Sbjct: 137 ADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPYEALKVFEDM 196
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
N+ P+E T+V+ L AC ++++ G+ +H+ I ++ + P M +
Sbjct: 197 SHW-NVEPNEITMVNALIACAHSRDIDTGRWVHQRI-RKAGYDPFMSTS----------- 243
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
N N+I T+++ Y CG+L+ ARDLF++ P R+IV W +MIN Y Q+
Sbjct: 244 -----------NSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYE 292
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
R EA+ LF +M + PDK +++L+ CA AL G+ +H Y+ + I D +AT
Sbjct: 293 RHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLAT 352
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA-K 419
AL++MYAK G + A +IF L++KD WTS+I GLAM+G N+AL +F M +
Sbjct: 353 ALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLV 412
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD IT+IGVL ACSH GLV+E ++ F MTE+Y + P EHYGC++DLL RAG EAE
Sbjct: 413 PDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAER 472
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
L+ + + N + ++GALL+ C+I+ NV + ++ L+++E S H LL+NIYA
Sbjct: 473 LMETMTVQPN---IAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAK 529
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
A RWE+V R+ MK + K G SS+E+
Sbjct: 530 AGRWEEVNVTRKVMKHKRITKTIGHSSVEM 559
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/517 (40%), Positives = 310/517 (59%), Gaps = 30/517 (5%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++VH ++VKTG D + I+ + I +FD++P+++ +WN I
Sbjct: 32 KQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALA 91
Query: 166 KCM-RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP 224
+ R DA+ VF +M + P++ T S L AC + L GK++H + L+F
Sbjct: 92 ETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLL---LKFGL 148
Query: 225 I----MGNALLDMYCKCGCLSEARELF-------DEMPNK---------NVICWTSMVSG 264
+ + LL MY CG + +A LF D++ N NV+ MV G
Sbjct: 149 VDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDG 208
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF-REMQIIRLKPDKFI 323
Y G L+ AR+LFDR R +V W MI+GY Q + EA+ +F R MQ+ + P++
Sbjct: 209 YARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVT 268
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
LV++L ++LG LE GKW+H Y +N+I +D V+ +AL++MYAKCG IEKA+++F L
Sbjct: 269 LVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLP 328
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ + +W ++I GLAM+GK N S+M G P D+T+I +LSACSH GLVDEGR
Sbjct: 329 QNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRS 388
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
FFN M ++PK+EHYGC++DLLGRAG L+EAEELI +P + +++I + ALL A
Sbjct: 389 FFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVI---WKALLGAS 445
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
+++ N+ +G + A +L ++ DS + L+N+YAS+ W+ V VR MK+M +RK PG
Sbjct: 446 KMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPG 505
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
CS IEI+G+IHEFLV D SHS K+I+SML+ ++ L
Sbjct: 506 CSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKL 542
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 216/468 (46%), Gaps = 86/468 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LKQ+ A + + G + +++ ++ YA +F + A+N +I
Sbjct: 28 MRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVI 87
Query: 61 KAFAK-KGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+A A+ + +LL+F + L E V P+ FT+P V KA + + +G++VHG ++K G
Sbjct: 88 RALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFG 147
Query: 119 L-----------------------------------------------EFDTYVCNSIMD 131
L EF+ +CN ++D
Sbjct: 148 LVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVD 207
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
Y +G + ++LFD M + VVSWNV ISG+ + +++A+++F RM Q +++P+
Sbjct: 208 GYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRV 267
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T+VS L A + L LELGK +H Y + ++ ++G+AL+DMY KCG + +A ++F+ +
Sbjct: 268 TLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERL 327
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
P NVI W +++ G G KA D+F+
Sbjct: 328 PQNNVITWNAVIGGLAMHG---KANDIFN----------------------------YLS 356
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKC 369
M+ + P +A+L+ C+ G +++G+ + + +N + ++++ +
Sbjct: 357 RMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRA 416
Query: 370 GLIEKALEIFYELREK-DAASWTSIICGLAMNGKIN---KALELFSQM 413
G +E+A E+ + K D W +++ M+ I +A E+ QM
Sbjct: 417 GYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQM 464
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 144/292 (49%), Gaps = 8/292 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFV 94
GNL A ++F + ++++N++I +A+ G +++++ +F ++ + G V P+ T V
Sbjct: 213 GNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSV 272
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A+ LG ++ G+ VH Y K + D + ++++DMY G I ++F+ +P +V
Sbjct: 273 LPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNV 332
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
++WN I G + D + RM + C + P + T ++ LSAC+ ++ G+
Sbjct: 333 ITWNAVIGGLAMHGKANDIFNYLSRMEK-CGISPSDVTYIAILSACSHAGLVDEGRSFFN 391
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG---YVNC 268
+ + P + + ++D+ + G L EA EL MP K + + W +++ + N
Sbjct: 392 DMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNI 451
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+A ++ + D + A+ N Y +D A+ M+ + ++ D
Sbjct: 452 KIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKD 503
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/608 (35%), Positives = 335/608 (55%), Gaps = 38/608 (6%)
Query: 28 VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPD 87
+ + G L A ++F I +++ +I + + G F ++ +F + + V P
Sbjct: 47 ILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPT 106
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD 147
FT V + G G+KVH +VVK GL V NS+++MY G + K +FD
Sbjct: 107 QFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFD 166
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFR-----------RMRQGCN----------- 185
M ++ SWN IS H+ C R + A+ F M GCN
Sbjct: 167 RMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQF 226
Query: 186 ---------LMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDMYC 235
L PD ++ S LSAC L+ L GK+IH YI + + + + +GNAL+ MY
Sbjct: 227 FSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYA 286
Query: 236 KCGCLSEARELFDE--MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
K G + AR + ++ + + +VI +T++++GYV G + AR +F+ D+V WTAMI
Sbjct: 287 KSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMI 346
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GYVQ ++A+ +F+ M +P+ F L A+L+ + + +L GK IH +
Sbjct: 347 VGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEA 406
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELRE-KDAASWTSIICGLAMNGKINKALELFSQ 412
+ V AL MYAK G I A ++F LR+ +D SWTS+I LA +G +A+ELF Q
Sbjct: 407 LSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQ 466
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M++ G KPD IT++GVLSAC+HGGLV++GR +F+ M V++I P L HY C++DL GRAG
Sbjct: 467 MLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAG 526
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
LL EA + + +P E + I +G+LLS+C++Y NVD+ + A L IE +S ++
Sbjct: 527 LLQEAYKFVENMPMEPDVIA---WGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSA 583
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
LAN+Y+S +W+D +R+ MK GV+K G S ++I H F V D H + EIY M
Sbjct: 584 LANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKM 643
Query: 593 LDRMAKTL 600
+D++ K +
Sbjct: 644 MDKIWKEI 651
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 224/492 (45%), Gaps = 79/492 (16%)
Query: 116 KTGLEFD------------TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
KTG D T+ N+I+ Y GK+ ++FD +P +D VSW I G
Sbjct: 22 KTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVG 81
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEF 222
+ + RFEDA+ +F M + ++P + T+ + L++C A + +GK++H ++ + L
Sbjct: 82 YNQMGRFEDAIKIFVDMVKD-KVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHA 140
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ N+LL+MY K G L A+ +FD M +N W +M+S ++NCG+++ A F+
Sbjct: 141 CVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLS 200
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFRE-MQIIRLKPDKFILVALLTGCAQLGALEQGK 341
RDIV W +MI G Q +EA+ F ++ LKPD+F L + L+ CA L L GK
Sbjct: 201 ERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGK 260
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIE---------------------------- 373
IHGYI V ALI MYAK G +E
Sbjct: 261 QIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVK 320
Query: 374 -----KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
A +IF L++ D +WT++I G NG N A+E+F M+S G +P+ T +
Sbjct: 321 LGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAM 380
Query: 429 LSACSHGGLVDEGRRFF---------------NTMTEVYQIQPKLE-------------- 459
LSA S ++ G++ N +T +Y +
Sbjct: 381 LSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRD 440
Query: 460 --HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
+ +I L + GL +EA EL ++ + Y +LSAC G V+ G
Sbjct: 441 TVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFD 500
Query: 518 LLEKIESKDSSF 529
L++ + D +
Sbjct: 501 LMKNVHKIDPTL 512
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 161/326 (49%), Gaps = 43/326 (13%)
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L F+ + N L+++Y K G +A +LF+EMP K W +++SGY G+LEKA +FD
Sbjct: 6 LTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFD 65
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
PVRD V WT +I GY Q RF++A+ +F +M ++ P +F L +L CA G+
Sbjct: 66 LIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGI 125
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAK------------------------------- 368
GK +H ++ + + VA +L+ MYAK
Sbjct: 126 GKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMN 185
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA-KPDDITFIG 427
CG ++ AL F L E+D SW S+I G +G N+AL+ FS ++ + KPD +
Sbjct: 186 CGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLAS 245
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG----CLIDLLGRAGLLDEAEELIRK 483
LSAC++ + G++ Y ++ + G LI + ++G ++ A +I +
Sbjct: 246 ALSACANLEKLSFGKQIHG-----YIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Query: 484 IPNENNEIIVPLYGALLSACRIYGNV 509
+ ++I + ALL+ G++
Sbjct: 301 SGISDLDVIA--FTALLNGYVKLGDI 324
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 340/592 (57%), Gaps = 14/592 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F Q+N + N ++ T G L A +F S+ P ++N ++ FA+ F
Sbjct: 75 KVFDRMPQRNTFSYNAVLSVLT--KFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRF 132
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
++L F + + +++ A L ++ G ++H + K+ D Y+ +++
Sbjct: 133 EEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSAL 192
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY G + ++ FD M +++VSWN I+ + + A++VF M + PD
Sbjct: 193 VDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDN-GVEPD 251
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELF 247
E T+ S +SAC + + G +IH + + ++ ++GNAL+DMY KC ++EAR +F
Sbjct: 252 EITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVF 311
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D MP +NV+ TSMV GY ++ AR +F +++V W A+I GY Q +EAV
Sbjct: 312 DRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVR 371
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH------GYINENRITVDAVVATA 361
LF ++ + P + LL CA L L+ G+ H G+ ++ D V +
Sbjct: 372 LFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNS 431
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MY KCG++E +F + E+D SW ++I G A NG ALE+F +M+ G KPD
Sbjct: 432 LIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPD 491
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+T IGVLSACSH GLV+EGRR+F++M + P +H+ C++DLLGRAG LDEA +LI
Sbjct: 492 HVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLI 551
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+ +P + + ++ +G+LL+AC+++GN+++G+ +A L +I+ +S + LL+N+YA
Sbjct: 552 QTMPMQPDNVV---WGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELG 608
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
RW+DV VR++M++ GV K PGCS IEI +H F+V D H K+I+ +L
Sbjct: 609 RWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVL 660
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 156/301 (51%), Gaps = 1/301 (0%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
D L +C K+ + IH R I + + N L+D Y KCG +AR++F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D MP +N + +++S G+L++A ++F P D W AM++G+ Q +RF+EA+
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
F +M +++ + L+ CA L L G IH I+++R +D + +AL++MY+
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG++ A F + ++ SW S+I NG KALE+F M+ G +PD+IT
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
V+SAC+ + EG + + + + + L L+D+ + ++EA + ++P
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
Query: 488 N 488
N
Sbjct: 318 N 318
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 181/393 (46%), Gaps = 70/393 (17%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-------------- 152
++H ++KT + ++ N ++D YG G + +K+FD MP +
Sbjct: 38 ARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTK 97
Query: 153 -----------------DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
D SWN +SG + RFE+A+ F M + + +E + S
Sbjct: 98 FGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSE-DFVLNEYSFGS 156
Query: 196 TLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKN 254
LSAC L +L +G +IH I++ + MG+AL+DMY KCG ++ A+ FD M +N
Sbjct: 157 ALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRN 216
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
++ W S+++ Y G KA ++F M NG
Sbjct: 217 IVSWNSLITCYEQNGPAGKALEVF----------VMMMDNG------------------- 247
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCGLIE 373
++PD+ L ++++ CA A+ +G IH + ++ D V+ AL++MYAKC +
Sbjct: 248 --VEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVN 305
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+A +F + ++ S TS++CG A + A +FS M+ + + +++ +++ +
Sbjct: 306 EARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMM----EKNVVSWNALIAGYT 361
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
G +E R F + + I P +G L++
Sbjct: 362 QNGENEEAVRLF-LLLKRESIWPTHYTFGNLLN 393
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 235/679 (34%), Positives = 372/679 (54%), Gaps = 86/679 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ + I G+ + E L +VF + + G+L+ KIF I + + +NLL+ +A
Sbjct: 114 KRVHSVIISNGISVD-EALGAKLVF-MYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYA 171
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G+FR+S+ LF K+++ GV + +T+ V K LG+VK+ ++VHGYV+K G +T
Sbjct: 172 KIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTA 231
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NS++ Y G + + LFDE+ + DVVSWN I+G V + +++F +M
Sbjct: 232 VVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI-L 290
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-----INQELEFTPIMGNALLDMYCKCGC 239
+ D T+VS L AC + NL LG+ +H + ++E+ F+ N LLDMY KCG
Sbjct: 291 GVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFS----NTLLDMYSKCGN 346
Query: 240 LSEARE-------------------------------LFDEMPNKNV------------- 255
L+ A E LFDEM +K V
Sbjct: 347 LNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 406
Query: 256 -ICWTSMVSG-------------------------YVNCGQLEKARDLFDRSPVRDIVLW 289
C +S+ G Y CG +E+AR +F + PV+DIV W
Sbjct: 407 CACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSW 466
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
MI GY Q +EA+ LF +MQ + KPD + +L CA L AL++G+ IHG+I
Sbjct: 467 NTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILR 525
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
D VA AL++MYAKCGL+ A +F + +KD SWT +I G M+G N+A+
Sbjct: 526 RGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAIST 585
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
F++M G +PD+ +F +L+ACSH GL++EG +FFN+M ++PKLEHY C++DLL
Sbjct: 586 FNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLA 645
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
R G L +A + I +P + + I +G LLS CRI+ +V + EK+A + ++E ++ +
Sbjct: 646 RMGNLSKAYKFIESMPIKPDTTI---WGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRY 702
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+ +LAN+YA A +WE+V +R++M++ G ++ PGCS IE+ G + F+ G+ H + K+I
Sbjct: 703 YVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKI 762
Query: 590 YSMLDRMAKTLLDSKQNAM 608
+L ++ + + ++M
Sbjct: 763 DVLLSKLTMQMQNEDYSSM 781
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 206/431 (47%), Gaps = 38/431 (8%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N I F + G R ++ L +K + + + +Y V + ++ G++VH ++
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G+ D + ++ MY G + +K+FD++ + V WN+ +S + K F ++V +
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMY 234
F++M Q ++ + T L AL ++ K +H Y+ +L F + N+L+ Y
Sbjct: 183 FKKM-QKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYV-LKLGFGSNTAVVNSLIAAY 240
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
K G + A LFDE+ +V+ W SM++G V +N
Sbjct: 241 FKFGGVESAHNLFDELSEPDVVSWNSMINGCV--------------------------VN 274
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
G+ + +F +M I+ ++ D LV++L CA +G L G+ +HG+ + +
Sbjct: 275 GFS-----GNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSE 329
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
+ V + L++MY+KCG + A E+F ++ + SWTSII G + A+ LF +M
Sbjct: 330 EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQ 389
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
S G +PD T ++ AC+ +D+GR + + + + L LI++ + G +
Sbjct: 390 SKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYAKCGSV 448
Query: 475 DEAEELIRKIP 485
+EA + KIP
Sbjct: 449 EEARLVFSKIP 459
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/491 (39%), Positives = 308/491 (62%), Gaps = 5/491 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+K + H +++ GL+ D + + ++ LG +F D+ +N I
Sbjct: 54 LKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKA 113
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
+A+ ++ R+ +L D ++ L A L + +G++IH + I L
Sbjct: 114 LSNPELATEAILLYNRI-LASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVS 172
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ AL+ MY CGC+SEAR+LFD + ++V W +MV+GY G ++ AR LF+R P
Sbjct: 173 DIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMP 232
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R+++ WTA+I GY Q +R +EA+ +FR MQ+ ++PD+ ++A L+ CA LGALE G+W
Sbjct: 233 ERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEW 292
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH YI+++ ++ + ALI+MYAKCG IEKALE+F + K +WTS+I GLA++G
Sbjct: 293 IHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGL 352
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+ALE+FS M KP++ITF+ +LSAC H GLV+ GR +F M Y I+PK++HYG
Sbjct: 353 GREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYG 412
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C+IDLLGRAG L EA+EL+R +P E N P++G+LL+A RI+G+ ++G++ L K+
Sbjct: 413 CMIDLLGRAGFLQEAQELVRGMPFEAN---APIWGSLLAAARIHGDAELGKQALQHLIKV 469
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E +S +TLL+NIYA+ ++W + VR+ M++ GV+K+PG S IE+N +HEF+ GD
Sbjct: 470 EPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVAGDKL 529
Query: 583 HSEMKEIYSML 593
H + + I+ +L
Sbjct: 530 HPQSERIFEVL 540
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 206/435 (47%), Gaps = 68/435 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L Q + GL Q+ L++ + C+ S G Y+ IF P + YN +I
Sbjct: 54 LKHLHQTHCFMLSRGLDQDNILLSRFIEACS--SLGFSHYSHSIFTHKTRPDIYLYNTII 111
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KA + +++LL++++ + D ++ PFV KAV L + G ++H + TGL
Sbjct: 112 KALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLV 171
Query: 121 FDTYVCNSIMDMY--------------GV-----------------LGKICNVKKLFDEM 149
D +V +++ MY GV +G + N + LF+ M
Sbjct: 172 SDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERM 231
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P+++V+SW I+G+ + R +A+ +FRRM Q + PDE +++ LSAC L LELG
Sbjct: 232 PERNVISWTAVIAGYAQMDRPNEAITMFRRM-QLEEVEPDEIAMLAALSACAHLGALELG 290
Query: 210 KEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ IH YI++ L + NAL+DMY KCG + +A E+F M +K+VI WTSM+ G
Sbjct: 291 EWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALH 350
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G R EA+ +F M+ R+KP++ VA+L
Sbjct: 351 G-----------------------------LGR--EALEMFSCMERNRIKPNEITFVAIL 379
Query: 329 TGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKD 386
+ C +G +E G+W + I +I++ + G +++A E+ + E +
Sbjct: 380 SACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEAN 439
Query: 387 AASWTSIICGLAMNG 401
A W S++ ++G
Sbjct: 440 APIWGSLLAAARIHG 454
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 310/494 (62%), Gaps = 5/494 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+K + H +++ GL+ D + + ++ LG +F D+ +N I
Sbjct: 54 LKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKA 113
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
+A+ ++ R+ +L D ++ L A L + +G++IH + I L
Sbjct: 114 LSNPELATEAILLYNRI-LASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVS 172
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ AL+ MY CGC+SEAR+LFD + ++V W +MV+GY G ++ AR LF+R P
Sbjct: 173 DIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMP 232
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R+++ WTA+I GY Q +R +EA+ +FR MQ+ ++PD+ ++A L+ CA LGALE G+W
Sbjct: 233 ERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEW 292
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH YI+++ ++ + ALI+MYAKCG IEKALE+F + K +WTS+I GLA++G
Sbjct: 293 IHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGL 352
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+ALE+FS M KP++ITF+ +LSAC H GLV+ GR +F M Y I+PK++HYG
Sbjct: 353 GREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYG 412
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C+IDLLGRAG L EA+EL+R +P E N P++G+LL+A RI+G+ ++G++ L K+
Sbjct: 413 CMIDLLGRAGFLQEAQELVRGMPFEAN---APIWGSLLAAARIHGDAELGKQALQHLIKV 469
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E +S +TLL+NIYA+ ++W + VR+ M++ GV+K+PG S IE+N +HEF+ GD
Sbjct: 470 EPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVAGDKL 529
Query: 583 HSEMKEIYSMLDRM 596
H + + I+ +L ++
Sbjct: 530 HPQSERIFEVLCKJ 543
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 206/435 (47%), Gaps = 68/435 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L Q + GL Q+ L++ + C+ S G Y+ IF P + YN +I
Sbjct: 54 LKHLHQTHCFMLSRGLDQDNILLSRFIEACS--SLGFSHYSHSIFTHKTRPDIYLYNTII 111
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KA + +++LL++++ + D ++ PFV KAV L + G ++H + TGL
Sbjct: 112 KALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLV 171
Query: 121 FDTYVCNSIMDMY--------------GV-----------------LGKICNVKKLFDEM 149
D +V +++ MY GV +G + N + LF+ M
Sbjct: 172 SDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERM 231
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P+++V+SW I+G+ + R +A+ +FRRM Q + PDE +++ LSAC L LELG
Sbjct: 232 PERNVISWTAVIAGYAQMDRPNEAITMFRRM-QLEEVEPDEIAMLAALSACAHLGALELG 290
Query: 210 KEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ IH YI++ L + NAL+DMY KCG + +A E+F M +K+VI WTSM+ G
Sbjct: 291 EWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALH 350
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G R EA+ +F M+ R+KP++ VA+L
Sbjct: 351 G-----------------------------LGR--EALEMFSCMERNRIKPNEITFVAIL 379
Query: 329 TGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKD 386
+ C +G +E G+W + I +I++ + G +++A E+ + E +
Sbjct: 380 SACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEAN 439
Query: 387 AASWTSIICGLAMNG 401
A W S++ ++G
Sbjct: 440 APIWGSLLAAARIHG 454
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/563 (35%), Positives = 335/563 (59%), Gaps = 38/563 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F I+ P +++++ +I +KG R++ +F ++R GV P+ FT + A
Sbjct: 384 ALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATD 443
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
LG++ GE +H V K G E+D VCN+++ MY +G + + ++F+ ++D++SWN
Sbjct: 444 LGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNAL 503
Query: 161 ISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQ 218
+SG + + +F +M +G N P+ T +S L +C++L +++LGK++H + +
Sbjct: 504 LSGFHDNETCDTGLRIFNQMLAEGFN--PNMYTFISILRSCSSLSDVDLGKQVHAQIVKN 561
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
L+ +G AL+DMY A+ F LE A +F
Sbjct: 562 SLDGNDFVGTALVDMY--------AKNRF-----------------------LEDAETIF 590
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+R RD+ WT ++ GY Q + ++AV F +MQ +KP++F L + L+GC+++ L+
Sbjct: 591 NRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLD 650
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ +H + + D VA+AL++MYAKCG +E A +F L +D SW +IICG +
Sbjct: 651 SGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYS 710
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+G+ KAL+ F M+ G PD++TFIGVLSACSH GL++EG++ FN+++++Y I P +
Sbjct: 711 QHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTI 770
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
EHY C++D+LGRAG E E I ++ +N +I + +L AC+++GN++ GE+ A
Sbjct: 771 EHYACMVDILGRAGKFHEVESFIEEMKLTSNVLI---WETVLGACKMHGNIEFGERAAMK 827
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
L ++E + S + LL+N++A+ W+DVTNVR M GV+K PGCS +E+NG +H FL
Sbjct: 828 LFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLS 887
Query: 579 GDPSHSEMKEIYSMLDRMAKTLL 601
D SH +++EI+ L + + L+
Sbjct: 888 HDGSHPKIREIHLKLQDLHQKLM 910
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 149/586 (25%), Positives = 270/586 (46%), Gaps = 73/586 (12%)
Query: 5 KQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
KQ+ A+ ++G + L L C G ++ AE++F + +++N L+
Sbjct: 249 KQVHAEAIKVGDFSDLFVGSALVDLYAKC-----GEMVLAERVFLCMPKQNAVSWNALLN 303
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
FA+ G K L LF ++ ++ FT V K G ++ G+ VH ++ G E
Sbjct: 304 GFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCEL 363
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D ++ ++DMY G + K+F + D DVVSW+ I+ + + +A +VF+RMR
Sbjct: 364 DEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMR 423
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
++P++ T+ S +SA T L +L G+ IH + CK G
Sbjct: 424 HS-GVIPNQFTLASLVSAATDLGDLYYGESIHACV------------------CKYG--- 461
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
N +C ++V+ Y+ G ++ +F+ + RD++ W A+++G+
Sbjct: 462 --------FEYDNTVC-NALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNET 512
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
D + +F +M P+ + +++L C+ L ++ GK +H I +N + + V TA
Sbjct: 513 CDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTA 572
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MYAK +E A IF L ++D +WT I+ G A +G+ KA++ F QM G KP+
Sbjct: 573 LVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPN 632
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+ T LS CS +D GR+ + + Q + L+D+ + G +++AE +
Sbjct: 633 EFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ-SGDMFVASALVDMYAKCGCVEDAEVVF 691
Query: 482 RKIPNEN----NEII------------------------VP---LYGALLSACRIYGNVD 510
+ + + N II VP + +LSAC G ++
Sbjct: 692 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE 751
Query: 511 MGEKLAALLEKIESKDSSF--HTLLANIYASANRWEDVTNVRQKMK 554
G+K L KI + + + +I A ++ +V + ++MK
Sbjct: 752 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 797
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 228/486 (46%), Gaps = 38/486 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ + K I Q+ + G+ + N L+ + G+ YA K+FG I ++++ LI
Sbjct: 144 LNEGKAIHGQVIKSGINPDSHLWNSLVN--VYAKCGSANYACKVFGEIPERDVVSWTALI 201
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F +G ++ LF ++R GV + FTY KA +++ G++VH +K G
Sbjct: 202 TGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDF 261
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V ++++D+Y G++ +++F MP ++ VSWN ++G + E +++F RM
Sbjct: 262 SDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRM 321
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
G + + T+ + L C NL G+ +H I E + L+DMY KCG
Sbjct: 322 -TGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGL 380
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+A ++F + + +V+ W+++++ GQ +A ++F R
Sbjct: 381 AGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKR------------------- 421
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
R +I P++F L +L++ LG L G+ IH + + D V
Sbjct: 422 ---------MRHSGVI---PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVC 469
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
AL+ MY K G ++ +F +D SW +++ G N + L +F+QM++ G
Sbjct: 470 NALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFN 529
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAE 478
P+ TFI +L +CS VD G++ + V + G L+D+ + L++AE
Sbjct: 530 PNMYTFISILRSCSSLSDVDLGKQVHAQI--VKNSLDGNDFVGTALVDMYAKNRFLEDAE 587
Query: 479 ELIRKI 484
+ ++
Sbjct: 588 TIFNRL 593
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 232/496 (46%), Gaps = 66/496 (13%)
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
Y + + G++ +G+ +HG V+K+G+ D+++ NS++++Y G K+F E+P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
++DVVSW I+G V AV++F MR+ + +E T + L AC+ +LE GK
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRRE-GVEANEFTYATALKACSMCLDLEFGK 249
Query: 211 EIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
++H + +F+ + +G+AL+D+Y KCG + A +F MP +N + W ++++G+ G
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
EK +LF R M + F+ KF L +L
Sbjct: 310 DAEKVLNLFCR-----------MTGSEINFS--------------------KFTLSTVLK 338
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
GCA G L G+ +H +D ++ L++MY+KCGL AL++F + + D S
Sbjct: 339 GCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVS 398
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS-----------HGGLV 438
W++II L G+ +A E+F +M G P+ T ++SA + H +
Sbjct: 399 WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVC 458
Query: 439 DEGRRFFNT----MTEVYQIQPKLEHYGCLI-------DLLGRAGLL---------DEAE 478
G + NT + +Y ++ GC + DL+ LL D
Sbjct: 459 KYGFEYDNTVCNALVTMYMKIGSVQD-GCRVFEATTNRDLISWNALLSGFHDNETCDTGL 517
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF-HTLLANIY 537
+ ++ E + + ++L +C +VD+G+++ A + K + F T L ++Y
Sbjct: 518 RIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMY 577
Query: 538 ASANRWEDVTNVRQKM 553
A ED + ++
Sbjct: 578 AKNRFLEDAETIFNRL 593
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ AQI + L N L+ + + L AE IF + L A+ +++ +A
Sbjct: 552 KQVHAQIVKNSLDGNDFVGTALVDM--YAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYA 609
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G K++ F +++ GV P+ FT + + G ++H +K G D +
Sbjct: 610 QDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMF 669
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V ++++DMY G + + + +FD + +D VSWN I G+ + + A+ F M
Sbjct: 670 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDE- 728
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
+PDE T + LSAC+ + +E GK+ +++ TP + + ++D+ + G E
Sbjct: 729 GTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHE 788
Query: 243 ARELFDEMP-NKNVICWTSMVSGYVNCGQLE----KARDLFDRSPVRD 285
+EM NV+ W +++ G +E A LF+ P D
Sbjct: 789 VESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEID 836
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/556 (37%), Positives = 313/556 (56%), Gaps = 45/556 (8%)
Query: 52 CLLAYNLLIKAFAKKG----SFRK-SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE-VK 105
C +N LI + G +FR +LLL + G PD +T P KA LG ++
Sbjct: 76 CAHPFNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLR 135
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+G + H K G V N+++ YG G+ + +K+FDEM ++DVVSW +S
Sbjct: 136 EGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFT 195
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTP 224
+ F +A+ V M ++ P+E T+ S L AC L GK +H Y +E E
Sbjct: 196 RGGMFMEALGVLAEM----DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNL 251
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
I+GNALLDMY V C +L+ AR +FD R
Sbjct: 252 IVGNALLDMY-------------------------------VKCEKLDLARRVFDMLLAR 280
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
DIV WT MI+G VQ R EA+ +F MQI +KPDK +L +L+ CA LGALE G+W+H
Sbjct: 281 DIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVH 340
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
YI I D V T++++MY KCG ++ A+ IF E+ K+ +SW ++I G A++G+
Sbjct: 341 EYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGR 400
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+AL+ F +M++ G P+++TFI VL AC H GLV EGR+ F MT+ Y++ P +HYGC+
Sbjct: 401 EALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCM 460
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAGL+ EA ++I+ +P V + LLSAC+ +G +D +++ + ++ES
Sbjct: 461 VDLLGRAGLIQEAYDVIKAMPMRPG---VFTWVTLLSACQAHGRMDFSQQILMHIHELES 517
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+ + LL+N+YA ++RW DV R M E G++K PG S IE+NG EFLVG +H
Sbjct: 518 SGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKTCEFLVGQQNHL 577
Query: 585 EMKEIYSMLDRMAKTL 600
M ++ +ML + K +
Sbjct: 578 YMDDVRAMLSILMKQI 593
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 203/412 (49%), Gaps = 45/412 (10%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q A + G N L+ F + + G A K+F + ++++ L+ AF +
Sbjct: 139 QAHAVAEKAGFLGRVPVQNALVTF--YGACGQCGDARKVFDEMAERDVVSWTALLSAFTR 196
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G F ++L L E V+P+ T V A G LG + G+ VHG+ + E + V
Sbjct: 197 GGMFMEAL---GVLAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIV 253
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N+++DMY K+ +++FD + +D+VSW V ISG V+C R +A++VF M Q
Sbjct: 254 GNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAM-QISG 312
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEAR 244
+ PD+ + + LSAC +L LE G+ +H YI ++ +E+ +G +++DMY KCGCL A
Sbjct: 313 VKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAV 372
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+F EMP KNV W ++++G+ G+ +A D FDR
Sbjct: 373 SIFQEMPLKNVSSWNALINGFALHGRGREALDCFDR------------------------ 408
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALI 363
M L P++ + +L C G +++G+ + + ++ +++ ++
Sbjct: 409 -------MVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMV 461
Query: 364 EMYAKCGLIEKALEIFYELREKDAA-SWTSIICGLAMNGKINKALELFSQMI 414
++ + GLI++A ++ + + +W +++ +G+++ FSQ I
Sbjct: 462 DLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMD-----FSQQI 508
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 328/558 (58%), Gaps = 35/558 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + + ++N +I + + G K+L LF +++ G PD+ T V +
Sbjct: 160 AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR 219
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L ++++G+++H +V++G D +V ++++DMYG G + K++F+++ K+VVSWN
Sbjct: 220 LLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSM 279
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQE 219
I+G+ + +++FRRM + + P T+ S L AC+ NL+LGK IH YI
Sbjct: 280 IAGYSLKGDSKSCIELFRRMDEE-GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR 338
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+E + ++L+D+Y KC G + A ++F
Sbjct: 339 VEADIFVNSSLIDLYFKC-------------------------------GNIGSAENVFQ 367
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P ++V W MI+GYV+ + EA+ +F +M+ +KPD ++L C+QL LE+
Sbjct: 368 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEK 427
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK IH +I E+++ ++ VV AL++MYAKCG +++AL IF +L E+D SWTS+I
Sbjct: 428 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGS 487
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G+ +AL+LF +M AKPD +TF+ +LSACSH GLVDEG +FN M Y +P +E
Sbjct: 488 HGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVE 547
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY CLIDLLGR G L EA E++++ P+ + V L L SAC ++ +D+GE++ LL
Sbjct: 548 HYSCLIDLLGRVGRLREAYEILQRTPDIRED--VGLLSTLFSACHLHKKLDLGEQIGRLL 605
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+ + D S + +L+N+YAS +W++V VR K+KE+G++K PGCS IE+ IH F+V
Sbjct: 606 IEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVE 665
Query: 580 DPSHSEMKEIYSMLDRMA 597
D SH + IY + +A
Sbjct: 666 DKSHPQADMIYECMSILA 683
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 264/536 (49%), Gaps = 57/536 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKL--MVFCTHPSHGNLLYAEKIFGSIQSPC-LLAYN 57
+ Q K I +I +GLQ N L + F H A+ +F +I++P + +N
Sbjct: 19 LKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQS----AKLVFQTIENPLDITLWN 74
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
L+ A K F + L +F +L + PD FTYP V KA LG V G+ VH +V+K
Sbjct: 75 GLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIK 134
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
+G D V +S + MY + KLFDEMP++DV SWN IS + + + E A+++
Sbjct: 135 SGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALEL 194
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYC 235
F M+ PD T+ + +S+C L +LE GKEIH + + +AL+DMY
Sbjct: 195 FEEMKVS-GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYG 253
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCGCL A+E+F+++ KNV+ W SM++GY G +
Sbjct: 254 KCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSK----------------------- 290
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+ LFR M ++P L ++L C++ L+ GK+IHGYI NR+ D
Sbjct: 291 --------SCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 342
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V ++LI++Y KCG I A +F + + + SW +I G G +AL +F+ M
Sbjct: 343 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 402
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE----HYGCLIDLLGRA 471
G KPD ITF VL ACS ++++G+ N + I+ KLE G L+D+ +
Sbjct: 403 AGVKPDAITFTSVLPACSQLAVLEKGKEIHN-----FIIESKLEINEVVMGALLDMYAKC 457
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
G +DEA + ++P + + + S YG+ + L EK++ D+
Sbjct: 458 GAVDEALHIFNQLPERD-------FVSWTSMIAAYGSHGQAFEALKLFEKMQQSDA 506
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 202/399 (50%), Gaps = 38/399 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A+++F IQ ++++N +I ++ KG + + LF ++ E G+ P T +
Sbjct: 256 GCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSIL 315
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A ++ G+ +HGY+++ +E D +V +S++D+Y G I + + +F MP +VV
Sbjct: 316 MACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVV 375
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWNV ISG+VK + +A+ +F MR+ + PD T S L AC+ L LE GKEIH +
Sbjct: 376 SWNVMISGYVKVGSYLEALVIFTDMRKA-GVKPDAITFTSVLPACSQLAVLEKGKEIHNF 434
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I +LE ++ ALLDMY KCG + EA +F+++P ++ + WTSM++ Y + GQ
Sbjct: 435 IIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAF-- 492
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
EA+ LF +MQ KPDK +A+L+ C+
Sbjct: 493 -----------------------------EALKLFEKMQQSDAKPDKVTFLAILSACSHA 523
Query: 335 GALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
G +++G + + I E + LI++ + G + +A EI R D +
Sbjct: 524 GLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ--RTPDIREDVGL 581
Query: 394 ICGLAMNGKINKALELFSQM--ISGGAKPDDITFIGVLS 430
+ L ++K L+L Q+ + PDD + +LS
Sbjct: 582 LSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILS 620
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 149/304 (49%), Gaps = 37/304 (12%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
D ++S L C K L+ GK IH + ++ L+ + +L+++Y C A+ +F
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
+ N P+ DI LW ++ + F E +
Sbjct: 62 QTIEN-----------------------------PL-DITLWNGLMAACTKNFIFIEGLE 91
Query: 308 LF-REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
+F R + LKPD F ++L C+ LG + GK +H ++ ++ +D VV ++ + MY
Sbjct: 92 VFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMY 151
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKC + E A+++F E+ E+D ASW ++I +G+ KALELF +M G KPD +T
Sbjct: 152 AKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLT 211
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAEELIRKI 484
V+S+C+ ++ G+ E+ + L+ + L+D+ G+ G L+ A+E+ +I
Sbjct: 212 TVISSCARLLDLERGKEIH---MELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI 268
Query: 485 PNEN 488
+N
Sbjct: 269 QRKN 272
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 175/328 (53%), Gaps = 29/328 (8%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GN+ AE +F ++ ++++N++I + K GS+ ++L++F+ +R+ GV PD T+ V
Sbjct: 357 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 416
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A L ++KG+++H +++++ LE + V +++DMY G + +F+++P++D V
Sbjct: 417 PACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFV 476
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW I+ + + +A+ +F +M+Q + PD+ T ++ LSAC+ + L E Y
Sbjct: 477 SWTSMIAAYGSHGQAFEALKLFEKMQQS-DAKPDKVTFLAILSACS---HAGLVDEGCYY 532
Query: 216 INQ---ELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPN--KNVICWTSMVSG---- 264
NQ E F P + + L+D+ + G L EA E+ P+ ++V +++ S
Sbjct: 533 FNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLH 592
Query: 265 -YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
++ G+ + R L ++ P D + + N Y ++DE + +++ + LK +
Sbjct: 593 KKLDLGE-QIGRLLIEKDP-DDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKN--- 647
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENR 351
GC+ +E GK IH ++ E++
Sbjct: 648 -----PGCSW---IEVGKRIHPFVVEDK 667
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 328/558 (58%), Gaps = 35/558 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + + ++N +I + + G K+L LF +++ G PD+ T V +
Sbjct: 352 AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR 411
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L ++++G+++H +V++G D +V ++++DMYG G + K++F+++ K+VVSWN
Sbjct: 412 LLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSM 471
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQE 219
I+G+ + +++FRRM + + P T+ S L AC+ NL+LGK IH YI
Sbjct: 472 IAGYSLKGDSKSCIELFRRMDEE-GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR 530
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+E + ++L+D+Y KC G + A ++F
Sbjct: 531 VEADIFVNSSLIDLYFKC-------------------------------GNIGSAENVFQ 559
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P ++V W MI+GYV+ + EA+ +F +M+ +KPD ++L C+QL LE+
Sbjct: 560 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEK 619
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK IH +I E+++ ++ VV AL++MYAKCG +++AL IF +L E+D SWTS+I
Sbjct: 620 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGS 679
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G+ +AL+LF +M AKPD +TF+ +LSACSH GLVDEG +FN M Y +P +E
Sbjct: 680 HGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVE 739
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY CLIDLLGR G L EA E++++ P+ + V L L SAC ++ +D+GE++ LL
Sbjct: 740 HYSCLIDLLGRVGRLREAYEILQRTPDIRED--VGLLSTLFSACHLHKKLDLGEQIGRLL 797
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+ + D S + +L+N+YAS +W++V VR K+KE+G++K PGCS IE+ IH F+V
Sbjct: 798 IEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVE 857
Query: 580 DPSHSEMKEIYSMLDRMA 597
D SH + IY + +A
Sbjct: 858 DKSHPQADMIYECMSILA 875
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 262/532 (49%), Gaps = 57/532 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKL--MVFCTHPSHGNLLYAEKIFGSIQSPC-LLAYNLLIK 61
K I +I +GLQ N L + F H A+ +F +I++P + +N L+
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQS----AKLVFQTIENPLDITLWNGLMA 270
Query: 62 AFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A K F + L +F +L + PD FTYP V KA LG V G+ VH +V+K+G
Sbjct: 271 ACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFA 330
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V +S + MY + KLFDEMP++DV SWN IS + + + E A+++F M
Sbjct: 331 MDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 390
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGC 239
+ PD T+ + +S+C L +LE GKEIH + + +AL+DMY KCGC
Sbjct: 391 KVS-GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGC 449
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L A+E+F+++ KNV+ W SM++GY G +
Sbjct: 450 LEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS-------------------------- 483
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ LFR M ++P L ++L C++ L+ GK+IHGYI NR+ D V
Sbjct: 484 -----CIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVN 538
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
++LI++Y KCG I A +F + + + SW +I G G +AL +F+ M G K
Sbjct: 539 SSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVK 598
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE----HYGCLIDLLGRAGLLD 475
PD ITF VL ACS ++++G+ N + I+ KLE G L+D+ + G +D
Sbjct: 599 PDAITFTSVLPACSQLAVLEKGKEIHN-----FIIESKLEINEVVMGALLDMYAKCGAVD 653
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
EA + ++P + + + S YG+ + L EK++ D+
Sbjct: 654 EALHIFNQLPERD-------FVSWTSMIAAYGSHGQAFEALKLFEKMQQSDA 698
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 202/399 (50%), Gaps = 38/399 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A+++F IQ ++++N +I ++ KG + + LF ++ E G+ P T +
Sbjct: 448 GCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSIL 507
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A ++ G+ +HGY+++ +E D +V +S++D+Y G I + + +F MP +VV
Sbjct: 508 MACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVV 567
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWNV ISG+VK + +A+ +F MR+ + PD T S L AC+ L LE GKEIH +
Sbjct: 568 SWNVMISGYVKVGSYLEALVIFTDMRKA-GVKPDAITFTSVLPACSQLAVLEKGKEIHNF 626
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I +LE ++ ALLDMY KCG + EA +F+++P ++ + WTSM++ Y + GQ
Sbjct: 627 IIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAF-- 684
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
EA+ LF +MQ KPDK +A+L+ C+
Sbjct: 685 -----------------------------EALKLFEKMQQSDAKPDKVTFLAILSACSHA 715
Query: 335 GALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
G +++G + + I E + LI++ + G + +A EI R D +
Sbjct: 716 GLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ--RTPDIREDVGL 773
Query: 394 ICGLAMNGKINKALELFSQM--ISGGAKPDDITFIGVLS 430
+ L ++K L+L Q+ + PDD + +LS
Sbjct: 774 LSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILS 812
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 201/415 (48%), Gaps = 43/415 (10%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHV 165
G+ +H +V GL+ + +C S++++Y + K +F + + D+ WN ++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP 224
K F + ++VF R+ L PD T S L AC+ L + GK +H + I
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
++ ++ + MY KC +A +LFDEMP ++V W +++S Y GQ EKA +LF+
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFE----- 388
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
EM++ KPD L +++ CA+L LE+GK IH
Sbjct: 389 --------------------------EMKVSGFKPDSVTLTTVISSCARLLDLERGKEIH 422
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ + +D V++AL++MY KCG +E A E+F +++ K+ SW S+I G ++ G
Sbjct: 423 MELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSK 482
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+ELF +M G +P T +L ACS + G +F + +++ + L
Sbjct: 483 SCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSL 541
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
IDL + G + AE + + +P N V + ++S G V +G L AL+
Sbjct: 542 IDLYFKCGNIGSAENVFQNMPKTN----VVSWNVMIS-----GYVKVGSYLEALV 587
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 175/328 (53%), Gaps = 29/328 (8%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GN+ AE +F ++ ++++N++I + K GS+ ++L++F+ +R+ GV PD T+ V
Sbjct: 549 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 608
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A L ++KG+++H +++++ LE + V +++DMY G + +F+++P++D V
Sbjct: 609 PACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFV 668
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW I+ + + +A+ +F +M+Q + PD+ T ++ LSAC+ + L E Y
Sbjct: 669 SWTSMIAAYGSHGQAFEALKLFEKMQQS-DAKPDKVTFLAILSACS---HAGLVDEGCYY 724
Query: 216 INQ---ELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPN--KNVICWTSMVSG---- 264
NQ E F P + + L+D+ + G L EA E+ P+ ++V +++ S
Sbjct: 725 FNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLH 784
Query: 265 -YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
++ G+ + R L ++ P D + + N Y ++DE + +++ + LK +
Sbjct: 785 KKLDLGE-QIGRLLIEKDP-DDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKN--- 839
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENR 351
GC+ +E GK IH ++ E++
Sbjct: 840 -----PGCSW---IEVGKRIHPFVVEDK 859
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/575 (36%), Positives = 331/575 (57%), Gaps = 38/575 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTH-PSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L Q+ + + + +N L++L+ FCT P NL YA +F SI P + +N +
Sbjct: 19 LVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSM 78
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ ++ + K+L+ + ++ +G SPD FT+P+V KA L +++ G VHG+VVKTG
Sbjct: 79 IRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGF 138
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E + YV ++ MY G++ ++F+++P +VV+W ISG V RF DA++ FR
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFRE 198
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
M Q + +E +V L AC K++ GK H ++ Q L F P
Sbjct: 199 M-QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL-QGLGFDP--------------- 241
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
F NVI TS++ Y CG L AR LFD P R +V W ++I GY Q
Sbjct: 242 ------YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 300 NRFDEAVALFREMQIIRLKPDKF-----ILVALLTGCAQLGALEQGKWIHGYINENRITV 354
+EA+ +F +M + + PDK I +++ GC+QLG + IH Y+++
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG-----QSIHAYVSKTGFVK 350
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
DA + AL+ MYAK G E A + F +L +KD +WT +I GLA +G N+AL +F +M
Sbjct: 351 DAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQ 410
Query: 415 -SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G A PD IT++GVL ACSH GLV+EG+R+F M +++ ++P +EHYGC++D+L RAG
Sbjct: 411 EKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGR 470
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
+EAE L++ +P + N V ++GALL+ C I+ N+++ +++ +++ + E S + LL
Sbjct: 471 FEEAERLVKTMPVKPN---VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLL 527
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+NIYA A RW DV +R+ MK V KV G SS+E
Sbjct: 528 SNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/530 (37%), Positives = 307/530 (57%), Gaps = 43/530 (8%)
Query: 104 VKKGEKVHG-YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+K K+H V+ L D + +M Y G+ + +FD +K+VV +NV I
Sbjct: 51 IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIR 110
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
+V + +A+ +F+ M C PD T L AC+ L NL +G ++H I + L+
Sbjct: 111 SYVNNNLYVEALSIFQVML-SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA------- 274
+GNAL+ MY KCGCL EAR++ D+MP ++V+ W SMV+GY GQ + A
Sbjct: 170 TNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229
Query: 275 ------------------------------RDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
++F+R ++++ W MI YV + +E
Sbjct: 230 DSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE 289
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
AV+LF +M+ +KPD + +LL C L AL G+ +H YI + + + ++ AL++
Sbjct: 290 AVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLD 349
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MYAKCG +E+A ++F ++R +D SWTS++ +G+ A+ LF++M+ G PD I
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIA 409
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ VLSACSH GL+D+GR +F MTE Y I P++EH+ C++DL GRAG ++EA I+++
Sbjct: 410 FVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQM 469
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P E NE + +GALLSACR++ +D+G A LL ++ K S ++ LL+NIYA A W+
Sbjct: 470 PMEPNERV---WGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWK 526
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
DV NVR MK++G++KVPG S++E+NG +H FL GD H + K IY LD
Sbjct: 527 DVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELD 576
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 213/433 (49%), Gaps = 45/433 (10%)
Query: 16 LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLL 75
L+ +P KLM + + G A IF ++ +N++I+++ + ++L +
Sbjct: 67 LRIDPTLAIKLMR--AYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSI 124
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV 135
F + +PD++T+P V KA L ++ G +VH +VK GL+ + ++ N+++ MYG
Sbjct: 125 FQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGK 184
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
G + +K+ D+MP +DVVSWN ++G+ + +F+DA+++ + M NL D GT+ S
Sbjct: 185 CGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM-DSLNLNHDAGTMAS 243
Query: 196 TLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM----- 250
LS +LE + IH + + I N ++ +Y +EA LF +M
Sbjct: 244 -LSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGM 302
Query: 251 -PNK---------------------------------NVICWTSMVSGYVNCGQLEKARD 276
P+ N++ +++ Y CG LE+ARD
Sbjct: 303 KPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARD 362
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
+FD+ +RD+V WT+M++ Y + + +AVALF +M PD V++L+ C+ G
Sbjct: 363 VFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGL 422
Query: 337 LEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYEL-REKDAASWTSII 394
L+QG+ + E V + A +++++ + G +E+A ++ E + W +++
Sbjct: 423 LDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALL 482
Query: 395 CGLAMNGKINKAL 407
++ K++ L
Sbjct: 483 SACRVHSKMDIGL 495
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 130/263 (49%), Gaps = 6/263 (2%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
+I ++ + L + T+ L + S N+ Y +F + L+++N++I +
Sbjct: 224 EICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVN 283
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+++ LF ++ E G+ PD T + A G L + G ++H Y+ K L+ + +
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLL 343
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGC 184
N+++DMY G + + +FD+M +DVVSW +S + + + DAV +F +M G
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ 403
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
N PD VS LSAC+ L+ G+ R + ++ P + + ++D++ + G + E
Sbjct: 404 N--PDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEE 461
Query: 243 ARELFDEMP-NKNVICWTSMVSG 264
A +MP N W +++S
Sbjct: 462 AYSFIKQMPMEPNERVWGALLSA 484
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 162/389 (41%), Gaps = 48/389 (12%)
Query: 168 MRFED-AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM 226
+RF+ V+VF + + C ++ D+ + TL+ +L +I IN+ L P +
Sbjct: 26 IRFDRLKVEVFSK--EACEVILDQYPGIKTLN--------KLHSKI--VINEHLRIDPTL 73
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
L+ Y G S AR +FD KNV+
Sbjct: 74 AIKLMRAYSAQGETSVARYIFDRSLEKNVV------------------------------ 103
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
+ MI YV N + EA+++F+ M PD + +L C+ L L G +H
Sbjct: 104 -FFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDA 162
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I + + + + AL+ MY KCG + +A ++ ++ +D SW S++ G A +G+ + A
Sbjct: 163 IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA 222
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
LE+ +M S D T + + L E ++ + M E + L + +I
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQYIHNMFE-RMTKKNLISWNVMIA 279
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
+ + +EA L ++ + +LL AC + +G +L +EK +
Sbjct: 280 IYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQP 339
Query: 527 S-SFHTLLANIYASANRWEDVTNVRQKMK 554
+ L ++YA E+ +V KM+
Sbjct: 340 NLLLENALLDMYAKCGCLEEARDVFDKMR 368
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/530 (37%), Positives = 307/530 (57%), Gaps = 43/530 (8%)
Query: 104 VKKGEKVHG-YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+K K+H V+ L D + +M Y G+ + +FD +K+VV +NV I
Sbjct: 51 IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIR 110
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
+V + +A+ +F+ M C PD T L AC+ L NL +G ++H I + L+
Sbjct: 111 SYVNNNLYVEALSIFQVM-LSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA------- 274
+GNAL+ MY KCGCL EAR++ D+MP ++V+ W SMV+GY GQ + A
Sbjct: 170 TNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229
Query: 275 ------------------------------RDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
++F+R ++++ W MI YV + +E
Sbjct: 230 DSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE 289
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
AV+LF +M+ +KPD + +LL C L AL G+ +H YI + + + ++ AL++
Sbjct: 290 AVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLD 349
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MYAKCG +E+A ++F ++R +D SWTS++ +G+ A+ LF++M+ G PD I
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIA 409
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ VLSACSH GL+D+GR +F MTE Y I P++EH+ C++DL GRAG ++EA I+++
Sbjct: 410 FVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQM 469
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P E NE + +GALLSACR++ +D+G A LL ++ K S ++ LL+NIYA A W+
Sbjct: 470 PMEPNERV---WGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWK 526
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
DV NVR MK++G++KVPG S++E+NG +H FL GD H + K IY LD
Sbjct: 527 DVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELD 576
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 213/433 (49%), Gaps = 45/433 (10%)
Query: 16 LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLL 75
L+ +P KLM + + G A IF ++ +N++I+++ + ++L +
Sbjct: 67 LRIDPTLAIKLMR--AYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSI 124
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV 135
F + +PD++T+P V KA L ++ G +VH +VK GL+ + ++ N+++ MYG
Sbjct: 125 FQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGK 184
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
G + +K+ D+MP +DVVSWN ++G+ + +F+DA+++ + M NL D GT+ S
Sbjct: 185 CGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM-DSLNLNHDAGTMAS 243
Query: 196 TLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM----- 250
LS +LE + IH + + I N ++ +Y +EA LF +M
Sbjct: 244 -LSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGM 302
Query: 251 -PN---------------------------------KNVICWTSMVSGYVNCGQLEKARD 276
P+ N++ +++ Y CG LE+ARD
Sbjct: 303 KPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARD 362
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
+FD+ +RD+V WT+M++ Y + + +AVALF +M PD V++L+ C+ G
Sbjct: 363 VFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGL 422
Query: 337 LEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYEL-REKDAASWTSII 394
L+QG+ + E V + A +++++ + G +E+A ++ E + W +++
Sbjct: 423 LDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALL 482
Query: 395 CGLAMNGKINKAL 407
++ K++ L
Sbjct: 483 SACRVHSKMDIGL 495
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%), Gaps = 6/263 (2%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
+I ++ + L + T+ L + S N+ Y +F + L+++N++I +
Sbjct: 224 EICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVN 283
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+++ LF ++ E G+ PD T + A G L + G ++H Y+ K L + +
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLL 343
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGC 184
N+++DMY G + + +FD+M +DVVSW +S + + + DAV +F +M G
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ 403
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
N PD VS LSAC+ L+ G+ R + ++ P + + ++D++ + G + E
Sbjct: 404 N--PDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEE 461
Query: 243 ARELFDEMP-NKNVICWTSMVSG 264
A +MP N W +++S
Sbjct: 462 AYSFIKQMPMEPNERVWGALLSA 484
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 162/389 (41%), Gaps = 48/389 (12%)
Query: 168 MRFED-AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM 226
+RF+ V+VF + + C ++ D+ + TL+ +L +I IN+ L P +
Sbjct: 26 IRFDRLKVEVFSK--EACEVILDQYPGIKTLN--------KLHSKI--VINEHLRIDPTL 73
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
L+ Y G S AR +FD KNV+
Sbjct: 74 AIKLMRAYSAQGETSVARYIFDRSLEKNVV------------------------------ 103
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
+ MI YV N + EA+++F+ M PD + +L C+ L L G +H
Sbjct: 104 -FFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDA 162
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I + + + + AL+ MY KCG + +A ++ ++ +D SW S++ G A +G+ + A
Sbjct: 163 IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA 222
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
LE+ +M S D T + + L E ++ + M E + L + +I
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQYIHNMFE-RMTKKNLISWNVMIA 279
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
+ + +EA L ++ + +LL AC + +G +L +EK +
Sbjct: 280 IYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRP 339
Query: 527 S-SFHTLLANIYASANRWEDVTNVRQKMK 554
+ L ++YA E+ +V KM+
Sbjct: 340 NLLLENALLDMYAKCGCLEEARDVFDKMR 368
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/637 (34%), Positives = 343/637 (53%), Gaps = 43/637 (6%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHG-NLLYAEKIFGSIQSPCLLAYNL 58
Q ++ A + G +P + L+ C PS +L YA +F + L
Sbjct: 14 QATELHALVTTSGRLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRMPCSTFLFDTA 73
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG-EVKKGEKVHGYVVKT 117
L F + ++L+ ++ V PD FT+ F+FK G V G +H +T
Sbjct: 74 LRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRT 133
Query: 118 GLEFDT-YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG------------- 163
L + + I+ MY LG + ++ FDE KDVV+W ISG
Sbjct: 134 LLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRL 193
Query: 164 ------------------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
+ + R +AVD F M + PDE TV+ LSAC LK+
Sbjct: 194 LARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSD-GIAPDEVTVIGMLSACGQLKD 252
Query: 206 LELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVS 263
L G +H + ++ + + + AL+DMY KCG ARE+FD + + W +M+
Sbjct: 253 LNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMID 312
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
GY G ++ AR LFD+ D++ + ++I GY+ R EA+ LF +M+ L D F
Sbjct: 313 GYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFT 372
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+V LLT A LGAL QG+ +H I + + D + TAL++MY KCG +E+A+ F ++
Sbjct: 373 MVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMS 432
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+D +W+++I GLA NG ALE F M G + +T+I VL+ACSH L+DEGR
Sbjct: 433 VRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRL 492
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+F+ M ++ I+P++EHYGC+IDLLGR+GLLDEA +L++ +P + N +I + ++LSAC
Sbjct: 493 YFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVI---WASILSAC 549
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
R++ NVD+ + A L K+E + + + + NIY + +WED + +R+ M++ GV+K G
Sbjct: 550 RVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAG 609
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
SSI + G +H+F+VGD SH ++ EI M++ + + L
Sbjct: 610 YSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRL 646
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/512 (41%), Positives = 312/512 (60%), Gaps = 21/512 (4%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK--ICNVKKLFDEMPDKDVVSWNVSISGHV 165
+++H ++KT D ++ V + +K+F M + S+N I
Sbjct: 28 KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALS 87
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP 224
+ DA+ VF M + C++ P+ T S AC + L G+++H + L+
Sbjct: 88 ESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDE 147
Query: 225 IMGNALLDMYCKCGCLSEARELF---------DEMPNK------NVICWTSMVSGYVNCG 269
+ + ++ MY CG + +A LF D + +K +V+ W M+ GYV G
Sbjct: 148 FVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIG 207
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
+LE AR+LFD P R +V W MI GY Q F EAV +FREMQ+ + P+ LV++L
Sbjct: 208 ELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLP 267
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
++LGALE GKW+H Y N I VD V+ +ALI+MYAKCG IEKAL++F L +++ +
Sbjct: 268 AMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVT 327
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W++II GLAM+G+ L+ F M G P D+T+IG+LSACSH GLV+EGR FF+ M
Sbjct: 328 WSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMV 387
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
V ++P++EHYGC++DLLGRAGLL+E+EELI +P + +++I + ALL AC+++GNV
Sbjct: 388 RVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVI---WKALLGACKMHGNV 444
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+MG+++A L ++ DS + L+NIYAS WE V VR MKEM VRK PGCS IE+
Sbjct: 445 EMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIEL 504
Query: 570 NGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
+G+IHEFLV D SH + K+I+SML M++ L+
Sbjct: 505 DGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLI 536
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 142/284 (50%), Gaps = 10/284 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +F + ++++N++I +A+ G F++++ +F +++ V P+ T V
Sbjct: 207 GELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVL 266
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A+ LG ++ G+ VH Y V+ + D + ++++DMY G I ++F+ +P ++VV
Sbjct: 267 PAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVV 326
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W+ I+G R +D +D F M + +MP + T + LSAC+ + G+ +
Sbjct: 327 TWSTIIAGLAMHGRAKDTLDHFEDMERA-GVMPSDVTYIGLLSACSHAGLVNEGRWFFDH 385
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ + P + + ++D+ + G L E+ EL MP K + + W +++ G +E
Sbjct: 386 MVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVE 445
Query: 273 K----ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
A L + +P D + A+ N Y + E VA R M
Sbjct: 446 MGKRVAEHLMELAP-HDSGSYVALSNIYASLGNW-EGVAKVRLM 487
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/512 (40%), Positives = 296/512 (57%), Gaps = 44/512 (8%)
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
D+FTY F+ KA+ G V VH +VVK G DT+V N+++D Y G + +K+F
Sbjct: 5 DSFTYSFLIKALSAAG-VAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVF 63
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
DEMP++DVVSWN +++ V+ +F + MP++ TV
Sbjct: 64 DEMPERDVVSWNTAMAAMVREGELAGVRKLF-------DEMPEKDTVS------------ 104
Query: 207 ELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
N +LD Y K G + A ELF MP +NV+ W++MVSGY
Sbjct: 105 --------------------WNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYC 144
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G LE AR +FD+ P +++V WT M++ Q DEA LF +M+ ++ D +V+
Sbjct: 145 KKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVS 204
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF-YELREK 385
+L CA+ G+L GK IH Y+ + + V ALI+M+ KCG + +A +F E +K
Sbjct: 205 ILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQK 264
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D+ SW SII G AM+G +KALELF+QM G PD +T I VLSAC+H G VDEGRR F
Sbjct: 265 DSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHF 324
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+ M Y I P++EHYGC+IDLLGR GL+ EA +LI+ +P E NE+I +G+LLSACR+
Sbjct: 325 SNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVI---WGSLLSACRL 381
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ NV+ E L K++ ++ + +L+NIYA A +W D+ R +MK G +K G S
Sbjct: 382 HKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSS 441
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+E+N HEF VGD H + +I M+DR++
Sbjct: 442 WVELNETFHEFTVGDRKHQDSDQISEMVDRLS 473
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A IF + S L+ + +++ A A+KG ++ LF++++E V D +
Sbjct: 147 GDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSIL 206
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD-EMPDKDV 154
A G + G+++H YV K L T+VCN+++DM+ G + +FD E KD
Sbjct: 207 AACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDS 266
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
VSWN I G + A+++F +M+ QG N PD T+++ LSACT + ++ G+
Sbjct: 267 VSWNSIIGGFAMHGHGDKALELFAQMKQQGFN--PDAVTMINVLSACTHMGFVDEGRRHF 324
Query: 214 RYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
+ ++ P + + ++D+ + G + EA +L MP N + W S++S
Sbjct: 325 SNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSA 378
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/655 (35%), Positives = 345/655 (52%), Gaps = 71/655 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ + QI + GL +N LM F + G+L +A +F + ++N LI +A
Sbjct: 30 RSVHCQIIKKGLHLGVYLMNNLMTF--YAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYA 87
Query: 65 KKGSFRKS-------------------------------LLLFSKLRERGVSPDNFTYPF 93
K+G+F S + +F+K+ V P FT
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD------ 147
V + + G K+H +VVK GL V S+++MY G K +FD
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 148 -------------------------EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+MPD+D+VSWN ISG+ + +A+ +F +M
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLS 241
+L PD T+ S LSAC L+ L +GK+IH YI E E + +GNAL+ MY K G +
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 242 EARELFDE--MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
AR + + N N+I +TS++ GY G ++ AR++F++ RD+V WTAMI GYVQ
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+++A+ LFR M +P+ + L A+L+ + L LE GK IH + + V
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447
Query: 360 TALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI MYAK G I A +F +K+ SWTS+I LA +G +A+ LF +M+S G
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD IT++GVLSAC+H GLV++GR+++N MTEV++I+P L HY C+IDL GRAGLL EA
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
I +P E + I +G+LL++C+I+ N D+ + A L I+ +S + LAN+Y+
Sbjct: 568 LFIESMPIEPDNIA---WGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+ +WE+ R+ MK+ GVRK G S I I +H F V D H + EIY ++
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLM 679
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 231/485 (47%), Gaps = 76/485 (15%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G VH ++K GL Y+ N++M Y G + +FDEMP K SWN ISG+ K
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 167 CMRFE-------------------------------DAVDVFRRMRQGCNLMPDEGTVVS 195
FE +A+ +F +M + P + TV +
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISE-RVPPSQFTVSN 147
Query: 196 TLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
LS+C A + L++G++IH ++ + L + +LL+MY KCG A+ +FD M KN
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-Q 313
+ W +++S Y+ GQ E A F++ P RDIV W +MI+GY Q EA+A+F +M
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
LKPD F L ++L+ CA L L GK IH YI V ALI MYAK G +E
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 374 ---------------------------------KALEIFYELREKDAASWTSIICGLAMN 400
A EIF +LR++D +WT++I G N
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ-PKLE 459
G N ALELF M++ G +P+ T +LS S +++ G++ + + + P +
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ LI + + G ++ A+ + +PN EI+ + +++ A +G +G++ L
Sbjct: 448 N--ALIAMYAKTGNINVAKRVF-DLPNGKKEIVS--WTSMIMALAQHG---LGKEAINLF 499
Query: 520 EKIES 524
E++ S
Sbjct: 500 ERMLS 504
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 180/398 (45%), Gaps = 47/398 (11%)
Query: 197 LSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L +K+ G+ +H + I + L + N L+ Y K G L A +FDEMP K+
Sbjct: 17 LQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKST 76
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
W +++SGY G E +R L P D V WTA+I GY QF FD A+ +F +M
Sbjct: 77 FSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISE 136
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC------ 369
R+ P +F + +L+ CA L+ G+ IH ++ + + VAT+L+ MYAKC
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIA 196
Query: 370 -------------------------GLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
G E A F ++ ++D SW S+I G + G
Sbjct: 197 KVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNL 256
Query: 405 KALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG- 462
+AL +FS+M++ + KPD+ T +LSAC++ ++ G++ Y ++ + E G
Sbjct: 257 EALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI-----HAYILRAETETSGA 311
Query: 463 ---CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
LI + ++G ++ A ++ N II + +LL GNV + +
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIA--FTSLLDGYTKLGNVKPARE---IF 366
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
K+ +D T + Y W D + + M G
Sbjct: 367 NKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/604 (37%), Positives = 335/604 (55%), Gaps = 55/604 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM----VFCTHPSHGNLLYAEKIFGSIQSPCLLAY 56
+ ++++ AQ+ + GL ++P +KL+ + P+ + A S LLA
Sbjct: 117 LRHVQELHAQVLRQGLHRDPRAASKLIASYALLRRVPACRCVFSAAAAPPFAPSTALLA- 175
Query: 57 NLLIKAFAKKGSFRKSLLLFS--KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
N L++A+A +L +F LR+R D FTY F+ KA+ G V H +V
Sbjct: 176 NTLLRAYALNSLPHAALAVFVDMPLRQR----DTFTYSFLIKALATAG-VTPVRAAHTHV 230
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
K G DT+V N+++D Y + + KK+FDEM +DVVSWN +++ V+ + V
Sbjct: 231 FKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVR----KGEV 286
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMY 234
D R M + MP++ TV N +LD Y
Sbjct: 287 DAARSM---FDEMPEKDTV--------------------------------SWNTMLDGY 311
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
K G EA ELF MP +NV+ W+++VS Y G +E AR +FD+ P +++V WT M++
Sbjct: 312 AKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVS 371
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
Q EA LF EM+ ++ D +V++L CA+ G L GK IH ++ + ++
Sbjct: 372 ACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGR 431
Query: 355 DAVVATALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+V AL++M+ KCG + +A IF E+ EKD+ SW II G AM+G KAL LF+QM
Sbjct: 432 STLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQM 491
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G PD +T I VLSAC+H GLV+EGRRFF M Y I+P++EHYGC++DLLGR GL
Sbjct: 492 KQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGL 551
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
+ EA ++I+ +P E NE+I +G+LLSACR++ NV+ E A L ++ ++ + +L
Sbjct: 552 IKEAVDMIKSMPWEPNEVI---WGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYAVL 608
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA A +W D+ R +MK G +K G S IE++ HEF VGD H E +I M+
Sbjct: 609 SNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELDEAFHEFTVGDRKHPESDQISDMI 668
Query: 594 DRMA 597
DR++
Sbjct: 669 DRLS 672
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/620 (36%), Positives = 339/620 (54%), Gaps = 62/620 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVF-------CTHPSHGNLLYAEKIFGSIQS-PC 52
+ KQI AQ+ + L N + K F +P + + ++ S S PC
Sbjct: 97 LRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCN----FLKQFDWSFSSFPC 152
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
NL+I + ++ ++ + G PD +T P V K+ + + +++H
Sbjct: 153 ----NLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHT 208
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
VKT L D +V NS + +Y + G K+FD MP +DVVSW ISG++K F D
Sbjct: 209 LAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFND 268
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP-IMGNALL 231
AV +F RM ++ P+ T VS L AC L L LGK IH +++ ++ N L+
Sbjct: 269 AVALFLRM----DVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLM 324
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
DMY KC +++ A+ LFD P +DIV WT+
Sbjct: 325 DMYVKCESVTD-------------------------------AKRLFDEIPEKDIVSWTS 353
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI+G VQ+ E++ LF EM +PD IL ++L+ CA LG L+ G+W+H YI+ +R
Sbjct: 354 MISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSR 413
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
I D + T+LI+MYAKCG IE A ++F L K+ +W + I GLA+NG +AL+ F
Sbjct: 414 IKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFG 473
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE-VYQIQPKLEHYGCLIDLLGR 470
++ G +P++ITF+ V SAC H GLVDEGR +F MT Y + P LEHYGC++DLL R
Sbjct: 474 YLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCR 533
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
A L++EA ELI K+P + V + GALLSA YGNV++ ++ + E ++S +
Sbjct: 534 AELVEEAMELINKMPMPPD---VQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGVY 590
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
LL+N YA+ +W +V +VR+ MKE G+ K PG S I ++G H+F+VGD +H + ++I+
Sbjct: 591 VLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNNHPQSEDIH 650
Query: 591 SMLDRMAKTLLDSKQNAMEG 610
+L+ +A Q +EG
Sbjct: 651 VLLNILA------NQTYLEG 664
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/655 (35%), Positives = 345/655 (52%), Gaps = 71/655 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ + QI + GL +N LM F + G+L +A +F + ++N LI +A
Sbjct: 30 RSVHCQIIKKGLHLGVYLMNNLMTF--YAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYA 87
Query: 65 KKGSFRKS-------------------------------LLLFSKLRERGVSPDNFTYPF 93
K+G+F S + +F+K+ V P FT
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD------ 147
V + + G K+H +VVK GL V S+++MY G K +FD
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 148 -------------------------EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+MPD+D+VSWN ISG+ + +A+ +F +M
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLS 241
+L PD T+ S LSAC L+ L +GK+IH YI E E + +GNAL+ MY K G +
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 242 EARELFDE--MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
AR + + N N+I +TS++ GY G ++ AR++F++ RD+V WTAMI GYVQ
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+++A+ LFR M +P+ + L A+L+ + L LE GK IH + + V
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447
Query: 360 TALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI MYAK G I A +F +K+ SWTS+I LA +G +A+ LF +M+S G
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD IT++GVLSAC+H GLV++GR+++N MTEV++I+P L HY C+IDL GRAGLL EA
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
I +P E + I +G+LL++C+I+ N D+ + A L I+ +S + LAN+Y+
Sbjct: 568 LFIESMPIEPDNIA---WGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+ +WE+ R+ MK+ GVRK G S I I +H F V D H + EIY ++
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLM 679
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 230/485 (47%), Gaps = 76/485 (15%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G VH ++K GL Y+ N++M Y G + +FDEMP K SWN ISG+ K
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 167 CMRFE-------------------------------DAVDVFRRMRQGCNLMPDEGTVVS 195
FE +A+ +F +M + P + TV +
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISE-RVPPSQFTVSN 147
Query: 196 TLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
LS+C A + L++G++IH ++ + L + +LL+MY KCG A+ +FD M KN
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-Q 313
+ W +++S Y+ GQ E A F++ P RDIV W +MI+GY Q EA+ +F +M
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
LKPD F L ++L+ CA L L GK IH YI V ALI MYAK G +E
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 374 ---------------------------------KALEIFYELREKDAASWTSIICGLAMN 400
A EIF +LR++D +WT++I G N
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ-PKLE 459
G N ALELF M++ G +P+ T +LS S +++ G++ + + + P +
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ LI + + G ++ A+ + +PN EI+ + +++ A +G +G++ L
Sbjct: 448 N--ALIAMYAKTGNINVAKRVF-DLPNGKKEIVS--WTSMIMALAQHG---LGKEAINLF 499
Query: 520 EKIES 524
E++ S
Sbjct: 500 ERMLS 504
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 180/398 (45%), Gaps = 47/398 (11%)
Query: 197 LSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L +K+ G+ +H + I + L + N L+ Y K G L A +FDEMP K+
Sbjct: 17 LQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKST 76
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
W +++SGY G E +R L P D V WTA+I GY QF FD A+ +F +M
Sbjct: 77 FSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISE 136
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC------ 369
R+ P +F + +L+ CA L+ G+ IH ++ + + VAT+L+ MYAKC
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIA 196
Query: 370 -------------------------GLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
G E A F ++ ++D SW S+I G + G
Sbjct: 197 KVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNL 256
Query: 405 KALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG- 462
+AL +FS+M++ + KPD+ T +LSAC++ ++ G++ Y ++ + E G
Sbjct: 257 EALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI-----HAYILRAETETSGA 311
Query: 463 ---CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
LI + ++G ++ A ++ N II + +LL GNV + +
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIA--FTSLLDGYTKLGNVKPARE---IF 366
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
K+ +D T + Y W D + + M G
Sbjct: 367 NKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/561 (36%), Positives = 322/561 (57%), Gaps = 36/561 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F +Q L+ + ++I +A+ G +SL+LF K+RE GV PD V A
Sbjct: 84 ARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK 143
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
LG + K + Y+ + + D + +++DMY G + + +++FD M +K+V+SW+
Sbjct: 144 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAM 203
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
I+ + + A+D+FR M ++PD+ T+ S L AC+ LKNL++G+ IH + +
Sbjct: 204 IAAYGYHGQGRKALDLFRMMLSS-GMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFG 262
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L+ + AL+DMY KC ++E AR LFD
Sbjct: 263 LDLDHFVCAALVDMYGKCR-------------------------------EIEDARFLFD 291
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
+ P RD+V WT MI GY + +E++ LF +M+ + PDK +V ++ CA+LGA+ +
Sbjct: 292 KMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHK 351
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
+ I YI + +D ++ TA+I+M+AKCG +E A EIF + EK+ SW+++I
Sbjct: 352 ARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY 411
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G+ KAL+LF M+ G P+ IT + +L ACSH GLV+EG RFF+ M E Y ++ ++
Sbjct: 412 HGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVK 471
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY C++DLLGRAG LDEA +LI + E +E L+GA L ACR + +V + EK A L
Sbjct: 472 HYTCVVDLLGRAGRLDEALKLIESMTVEKDE---GLWGAFLGACRTHKDVVLAEKAATSL 528
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+++ ++ + LL+NIYA+A RWEDV R M + ++K+PG + IE++ H+F VG
Sbjct: 529 LELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVG 588
Query: 580 DPSHSEMKEIYSMLDRMAKTL 600
D +H KEIY ML + L
Sbjct: 589 DTTHPRSKEIYEMLKSLGNKL 609
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 237/457 (51%), Gaps = 41/457 (8%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
++ FAK G + F +L G PDN+T PFV +A L ++ G +H V K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
L+ D +VC +++DMY +I + + LFD+M ++D+V+W V I G+ +C + +++ +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKC 237
+MR+ ++PD+ +V+ + AC L + + I YI ++ + I+G A++DMY KC
Sbjct: 121 KMREE-GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
GC+ ARE+FD M KNVI W++M++ Y GQ KA D
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD--------------------- 218
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
LFR M + PDK L +LL C+ L L+ G+ IH + + + +D
Sbjct: 219 ----------LFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHF 268
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V AL++MY KC IE A +F ++ E+D +WT +I G A G N++L LF +M G
Sbjct: 269 VCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 328
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
PD + + V+ AC+ G + + R + + + Q + +ID+ + G ++ A
Sbjct: 329 VVPDKVAMVTVVFACAKLGAMHKART-IDDYIQRKKFQLDVILGTAMIDMHAKCGCVESA 387
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
E+ ++ +N V + A+++A YG G K
Sbjct: 388 REIFDRMEEKN----VISWSAMIAA---YGYHGQGRK 417
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 8/233 (3%)
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
M+ G+ + + FRE+ +PD + L ++ C L L+ G+ IH + +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ +D V AL++MY KC IE A +F +++E+D +WT +I G A GK N++L LF
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+M G PD + + V+ AC+ G + + R + + + Q + +ID+ +
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
G ++ A E+ ++ +N V + A+++A YG G K L + S
Sbjct: 180 GCVESAREIFDRMEEKN----VISWSAMIAA---YGYHGQGRKALDLFRMMLS 225
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H G + A +IF ++ +++++ +I A+ G RK+L LF + G+ P+ T
Sbjct: 378 HAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITL 437
Query: 92 PFVFKAVGWLGEVKKGEKVHG-----YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
+ A G V++G + Y V+ ++ Y C ++D+ G G++ KL
Sbjct: 438 VSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKH--YTC--VVDLLGRAGRLDEALKLI 493
Query: 147 DEMP-DKDVVSWNVSISGHVKCMRFEDAV 174
+ M +KD W + C +D V
Sbjct: 494 ESMTVEKDEGLWGAFLGA---CRTHKDVV 519
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/560 (36%), Positives = 328/560 (58%), Gaps = 31/560 (5%)
Query: 16 LQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
L+++P L +++ + +HP L A S +LI+A A S S
Sbjct: 21 LRRSPAHLRRIVPLLPSHPHLAAALCAVHFPLFPSSSATFLQKILIRASASSASPGLSFA 80
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK-GEKVHGYVVKTGLEFDTYVCNSIMDMY 133
FS L G+ PD FT P + + G L + G +VH V+ G D +V N+++ MY
Sbjct: 81 AFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMY 140
Query: 134 GVLGKICNVKKLFDEMPD-KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
G L +++++F DVVSWN I G+VKC E A VF M + G
Sbjct: 141 GALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPR------RNGV 194
Query: 193 VVSTL-SACTALKNLELGKEIHRYINQELEFTPIMG------NALLDMYCKCGCLSEARE 245
ST+ A L++ +E+ + P +G N+++ + + G L AR+
Sbjct: 195 SWSTMVGGYAAAGELDVAREM-------FDRMPAIGRNVVTWNSMVTGFARHGLLPLARK 247
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+FDEMP +N++ W +M+ GY ++ AR+LFD P +D+V WT MI+GY Q R+ +
Sbjct: 248 MFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDT 307
Query: 306 VALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV--VATAL 362
+ LFR MQ ++P++ +V++L+ CA L ALE+G+W+H +I+++++ ++ + AL
Sbjct: 308 LELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAAL 367
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MYAKCG + A++IF L K+ ++W ++I LAMNG +++ F QM G KP+D
Sbjct: 368 IDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPND 427
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITF+GVL+ACSHGGLVDEGRR F +M +QP+++HYGC++D+LGRAGLL+EAEELIR
Sbjct: 428 ITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIR 487
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK--IESKDSSFHTLLANIYASA 540
+P + ++ +GALL ACR++ D+ E++ + + + ++ S H L+++IYA+A
Sbjct: 488 SMPMAPDVMV---FGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAA 544
Query: 541 NRWEDVTNVRQKMKEMGVRK 560
+W DV RQ ++ G+RK
Sbjct: 545 GKWFDVLEARQVVQRSGIRK 564
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/502 (38%), Positives = 308/502 (61%), Gaps = 6/502 (1%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDM--YGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+K+ ++ H V+ GL D++ + ++ + + G + + KLF ++ + N
Sbjct: 17 HMKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNTM 76
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
I V + + + ++ +M + L PD T+ L AC L++ LG+ H + +
Sbjct: 77 IKAFVLKGKLINTIQIYSQMLEN-GLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLG 135
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
F +GN L+ MY G + AR +FDEMP + WT M+SGY G +E AR LFD
Sbjct: 136 FWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARMLFD 195
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
+P++D +W ++I+GYVQ N F E + +FR MQ L+PD+ ILV++L CA LGA+E
Sbjct: 196 EAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEI 255
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G W+H Y+++ + ++T LI+MYAKCG ++ A ++F + ++D W ++I G+AM
Sbjct: 256 GVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMAM 315
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
NG + AL LFS+M G KPDDITFI + +ACS+ G+ E R N+M VY ++PK E
Sbjct: 316 NGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSE 375
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL-YGALLSACRIYGNVDMGEKLAAL 518
HYGC++DLLGRAGLL EA+ELI K+PN ++ + + ALLSAC +G ++ E A
Sbjct: 376 HYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAEDAAQR 435
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
L +E ++ LL+N+YA+A + + V +R+ M+ GV K PGCSS++ING++HEF+
Sbjct: 436 LFHLEHHSGAY-VLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSVKINGVVHEFIA 494
Query: 579 GDPSHSEMKEIYSMLDRMAKTL 600
G+ +H +M+E++ +L++M K +
Sbjct: 495 GEETHLQMEEVHRVLEKMNKQM 516
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 214/444 (48%), Gaps = 70/444 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLK+ AQ+ GL + L++L+ FC+HP HG+L +A K+F IQ P + N +I
Sbjct: 18 MKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNTMI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KAF KG ++ ++S++ E G+ PDN+T P+V KA L GE HG VK G
Sbjct: 78 KAFVLKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLGFW 137
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC-------MRFEDA 173
FD +V N+++ MY G + + +FDEMP VSW V ISG+ K M F++A
Sbjct: 138 FDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARMLFDEA 197
Query: 174 ------------------------VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
+ +FR M Q L PDE +VS L AC L +E+G
Sbjct: 198 PMKDRGIWGSIISGYVQNNCFKEGLQMFRLM-QSTGLEPDEAILVSILCACAHLGAMEIG 256
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+HRY++Q + + L+DMY KCG L A++LFD M ++ ICW +M+SG
Sbjct: 257 VWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMA-- 314
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
+NG D A+ LF EM+ +KPD +A+
Sbjct: 315 ------------------------MNG-----DGDNALRLFSEMEKAGVKPDDITFIAIF 345
Query: 329 TGCAQLG-ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE--- 384
T C+ G A E + ++ + + ++++ + GL+++A E+ ++
Sbjct: 346 TACSYSGMAHEAIRLLNSMCTVYNMEPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSS 405
Query: 385 --KDAASWTSIICGLAMNGKINKA 406
+ A +W +++ +G+ A
Sbjct: 406 PTEQAIAWRALLSACCSHGQTEVA 429
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 321/530 (60%), Gaps = 18/530 (3%)
Query: 70 RKSLLLFSKLRE--RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCN 127
R ++ L++++ GV P FT V KA +++GE+VH +V K G + D +
Sbjct: 84 RDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIAT 143
Query: 128 SIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLM 187
+++D+Y G++ + +++FD + KD +N I+ +++ E A ++F +M
Sbjct: 144 TLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELF-------EVM 196
Query: 188 PDEGT--VVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
P+ T ++ + +A +++ K + N + ++ A++ + K G + +AR
Sbjct: 197 PERNTHTLMEMVGGYSARGDMDSAKHVFEMANGVVNM--VLCTAMISGFAKTGSVDDARS 254
Query: 246 LFDEMPNKNVICWTSMVS-GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+FD M ++V W M+ Y CG +E AR +FD P R++V WT+MI+GY Q +F +
Sbjct: 255 VFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQ 314
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
AV LFR+MQI +K D + +++ C Q+GAL+ G+++H Y + + + V +LI+
Sbjct: 315 AVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLID 374
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDI 423
MY+KCG I+KA EIF L ++D SWT +I G A+NG +AL+LF+QM G P++I
Sbjct: 375 MYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEI 434
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF+GVL++CSHGGLV++G F+ M++VY I P++EHYGC++DLLGRA LL EAE+ I +
Sbjct: 435 TFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEE 494
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + V ++ +LL ACR G V + E +A +E++E + LL+N+YA+ +RW
Sbjct: 495 MPIAPD---VAIWRSLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRW 551
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
DV VR M V K PGCS IE+NG HEFL GD +H E + IY++L
Sbjct: 552 VDVNKVRTGMGRSRVSKRPGCSVIEVNGCAHEFLSGDETHLETEAIYNIL 601
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 189/442 (42%), Gaps = 85/442 (19%)
Query: 5 KQIQAQIFQIGLQQNPE---TLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q+ +F+ G Q + TL L C G L A ++F + YN +I
Sbjct: 124 EQVHVHVFKNGFQTDERIATTLVDLYARC-----GRLDDARRVFDRLLVKDAQLYNTMIA 178
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSP------------DNFTYPFVFK-AVGWLGEVKKGE 108
A+ + G + LF + ER D + VF+ A G + V
Sbjct: 179 AYMEAGEVELAEELFEVMPERNTHTLMEMVGGYSARGDMDSAKHVFEMANGVVNMVLCTA 238
Query: 109 KVHGYVVKTGLEFDTYVCNSIMD----------------MYGVLGKICNVKKLFDEMPDK 152
+ G+ KTG D S+ D MY G + + +K+FD MP++
Sbjct: 239 MISGF-AKTGSVDDA---RSVFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPER 294
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
+VV W ISG+ + +F+ AV +FR M Q + D+ T+ + +S+C + L+LG+ +
Sbjct: 295 NVVCWTSMISGYTQVGKFKQAVKLFRDM-QISGVKADDATIATVVSSCGQMGALDLGRYV 353
Query: 213 HRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H Y + L + N+L+DMY KCG + +A E+F + ++ WT M+ G+ G
Sbjct: 354 HAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLS 413
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+A DLF + + E +++ P++ + +LT C
Sbjct: 414 GEALDLFAQ---------------------------MEEEGEVM---PNEITFLGVLTSC 443
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVAT------ALIEMYAKCGLIEKALEIFYELR-E 384
+ G +EQ GY + +R++ +A ++++ + L+ +A + E+
Sbjct: 444 SHGGLVEQ-----GYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIA 498
Query: 385 KDAASWTSIICGLAMNGKINKA 406
D A W S++ G++ A
Sbjct: 499 PDVAIWRSLLFACRARGEVGLA 520
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/521 (39%), Positives = 307/521 (58%), Gaps = 38/521 (7%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK-ICNVKKLFDEMPDKDVVSWNVSI----- 161
+++H +KTG D ++ + I + +F +MP+ + WN +
Sbjct: 36 KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAE 95
Query: 162 --SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH----RY 215
H++ +A+ +F M + P+ T S L AC L GK+IH ++
Sbjct: 96 TNDEHLQ----SEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKF 151
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELF----------------DEMPNKNVICWT 259
E EF ++ N L+ MY C + +A LF + NV+ W
Sbjct: 152 GFHEDEF--VISN-LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWN 208
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
M+ G V G ++ A++LFD P R +V W MI+GY Q F EA+ LF+EMQ + P
Sbjct: 209 IMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDP 268
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+ LV++L A++GALE GKWIH Y +N++ +D V+ +AL++MY+KCG I+KAL++F
Sbjct: 269 NYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVF 328
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
L +++A +W++II AM+G+ A+ F M G P+D+ +IG+LSACSH GLV+
Sbjct: 329 ETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVE 388
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EGR FF+ M +V +QP++EHYGC++DLLGRAG L+EAEELIR +P E +++I + AL
Sbjct: 389 EGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVI---WKAL 445
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
L AC+++ N+ MGE++A L ++ DS + L+N+YAS WE V VR KMK M +R
Sbjct: 446 LGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIR 505
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
K PGCS IEI+GIIHEFLV D SHS+ KEI +ML M+ L
Sbjct: 506 KDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKL 546
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 217/500 (43%), Gaps = 118/500 (23%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LKQ+ A + G Q+P T +++ FC S ++ YA +F + P +N +++
Sbjct: 35 LKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSR-DIDYARAVFRQMPEPNCFCWNTILRIL 93
Query: 64 AKKGSFR---KSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
A+ ++L+LFS + G V P+ FT+P V KA +++G+++HG +VK G
Sbjct: 94 AETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGF 153
Query: 120 EFDTYVCNSIMDMYGV-------------------------------------------- 135
D +V ++++ MY +
Sbjct: 154 HEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDG 213
Query: 136 ---LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
LG I + K LFDEMP + VVSWNV ISG+ + F +A+++F+ M Q N+ P+ T
Sbjct: 214 QVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEM-QSSNIDPNYVT 272
Query: 193 VVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
+VS L A + LELGK IH Y + ++E ++G+AL+DMY KCG + +A ++F+ +P
Sbjct: 273 LVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLP 332
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+N I W +A+I + R ++A+ F
Sbjct: 333 KRNAITW-------------------------------SAIIGAFAMHGRAEDAIIHFHL 361
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M + P+ + +L+ C+ G +E+G+ ++ V V IE Y
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHM------VKVVGLQPRIEHYG---- 411
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
++ L G + +A EL M +PDD+ + +L A
Sbjct: 412 --------------------CMVDLLGRAGHLEEAEELIRNM---PIEPDDVIWKALLGA 448
Query: 432 CSHGGLVDEGRRFFNTMTEV 451
C + G R T+ E+
Sbjct: 449 CKMHKNLKMGERVAETLMEL 468
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 175/369 (47%), Gaps = 34/369 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A+ +F + ++++N++I +A+ G F +++ LF +++ + P+ T V
Sbjct: 218 GDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVL 277
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A+ +G ++ G+ +H Y K +E D + ++++DMY G I ++F+ +P ++ +
Sbjct: 278 PAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAI 337
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W+ I R EDA+ F M + + P++ + LSAC+ +E G+ +
Sbjct: 338 TWSAIIGAFAMHGRAEDAIIHFHLMGKA-GVTPNDVAYIGILSACSHAGLVEEGRSFFSH 396
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG---YVNCG 269
+ + + P + + ++D+ + G L EA EL MP + + W +++ + N
Sbjct: 397 MVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLK 456
Query: 270 QLEK-ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR-EMQIIRLKPDKFILVAL 327
E+ A L + +P D + A+ N Y + EAVA R +M+ + ++ D
Sbjct: 457 MGERVAETLMELAP-HDSGSYVALSNLYASLGNW-EAVARVRLKMKGMDIRKD------- 507
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDA-----VVATALIEMYAKC---GLIEKALEIF 379
GC+ + IHG I+E + D+ + L EM K G LE+F
Sbjct: 508 -PGCSWIE-------IHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVF 559
Query: 380 YELREKDAA 388
E++ A
Sbjct: 560 LNTDEQERA 568
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/606 (36%), Positives = 336/606 (55%), Gaps = 56/606 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM----VFCTHPSHGNLLYAEKIFGSIQSPC--LL 54
+ ++++ AQ+ + GL ++P T +KL+ + P+ + A + P L
Sbjct: 111 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTL 170
Query: 55 AYNLLIKAFAKKGSFRKSLLLF--SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
L++A+A +L +F LR+RG FTY F+ KA+ G + H
Sbjct: 171 LTKTLLRAYALNSLPHAALAVFLDVPLRQRG----TFTYSFLIKALAAAG-LTPVRGAHA 225
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+VVK G DT+V N+++D Y + + KK+FDEM +DVVSWN +++ V+ +
Sbjct: 226 HVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVR----QG 281
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD 232
VD R M + MP++ TV N +LD
Sbjct: 282 EVDAARSM---FDEMPEKDTVS--------------------------------WNTMLD 306
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
Y K G +A ELF MP +NV+ W+++VS Y G +E AR +FD+ P +++V WT M
Sbjct: 307 GYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIM 366
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
++ Q +EA LF EM ++ D +V++L CA+ G+L GK IH ++ + ++
Sbjct: 367 VSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKL 426
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFS 411
+ +V AL++M+ KCG + +A IF E+ EKD SW II G AM+G KALELF+
Sbjct: 427 SRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFA 486
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
QM G PD +T I VLSAC+H GLV+EGRRFF M Y I+P++EHYGC++DLLGR
Sbjct: 487 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRG 546
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
GL+ EA ++I+++P E NE+I +G+LLSACR++ NV+ E L ++ + +
Sbjct: 547 GLIKEAVDMIKRMPWEPNEVI---WGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYA 603
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
+L+NIYA A +W D+ R +MK G +K G S IE+N HEF VGD H E +I
Sbjct: 604 VLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKHPESDQISD 663
Query: 592 MLDRMA 597
M+DR++
Sbjct: 664 MIDRLS 669
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/548 (37%), Positives = 319/548 (58%), Gaps = 28/548 (5%)
Query: 23 LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER 82
L+KL+ FC G++ A+ +F I +P + +N +I+ F + R S+LL+ +L E
Sbjct: 28 LSKLIDFCVDSXFGDINNADLVFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIEN 87
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV 142
G SPD+FT+PFV KA + + G+ +H +VK+G E D Y ++ MY + +
Sbjct: 88 GYSPDHFTFPFVLKACCAIADQDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSG 147
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
K+FD +P +VV+W I+G+V + +A+ VF+ M C + P+E T+V+ L C
Sbjct: 148 LKVFDNIPIWNVVAWTCLIAGYVNNNQPYEALKVFKDMSH-CGVEPNEITMVNALIXCAR 206
Query: 203 LKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
++ + G+ +H++I ++ + P M + N N+I T+++
Sbjct: 207 SRDFDTGQWVHQHI-RKAGYDPFMSTS----------------------NSNIILATAIL 243
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
Y CG + ARDLF++ P R+IV W +MIN Y Q+ R EA+ LF +M + PDK
Sbjct: 244 EMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSGIYPDKA 303
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+++L+ CA L AL G+ +H Y+ + I D +ATAL++MYAK G + A +IF L
Sbjct: 304 TFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDMYAKTGGLGSAQKIFSSL 363
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEG 441
+++D WTS+I GLAM+G N+AL +F M + PD IT+IGVL ACSH GLV+E
Sbjct: 364 QKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHVGLVEEA 423
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
++ F MTE+Y I P EHYGC++DLL R+G EAE L+ + + N + + GALL
Sbjct: 424 KKHFRLMTEMYSIVPGREHYGCMVDLLSRSGHFGEAERLMETMAIQPN---ISIXGALLY 480
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
C+I+ N+ + ++ L ++ES S H LL+NIYA A RWEDV R+ MK + K+
Sbjct: 481 GCQIHENLXVANQVKERLTELESCQSGAHVLLSNIYAKAGRWEDVNGTRKVMKHKRITKI 540
Query: 562 PGCSSIEI 569
G SS+E+
Sbjct: 541 IGHSSVEM 548
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/606 (36%), Positives = 336/606 (55%), Gaps = 56/606 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM----VFCTHPSHGNLLYAEKIFGSIQSPC--LL 54
+ ++++ AQ+ + GL ++P T +KL+ + P+ + A + P L
Sbjct: 39 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTL 98
Query: 55 AYNLLIKAFAKKGSFRKSLLLF--SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
L++A+A +L +F LR+RG FTY F+ KA+ G + H
Sbjct: 99 LTKTLLRAYALNSLPHAALAVFLDVPLRQRG----TFTYSFLIKALAAAG-LTPVRGAHA 153
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+VVK G DT+V N+++D Y + + KK+FDEM +DVVSWN +++ V+ +
Sbjct: 154 HVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVR----QG 209
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD 232
VD R M + MP++ TV N +LD
Sbjct: 210 EVDAARSM---FDEMPEKDTVS--------------------------------WNTMLD 234
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
Y K G +A ELF MP +NV+ W+++VS Y G +E AR +FD+ P +++V WT M
Sbjct: 235 GYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIM 294
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
++ Q +EA LF EM ++ D +V++L CA+ G+L GK IH ++ + ++
Sbjct: 295 VSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKL 354
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFS 411
+ +V AL++M+ KCG + +A IF E+ EKD SW II G AM+G KALELF+
Sbjct: 355 SRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFA 414
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
QM G PD +T I VLSAC+H GLV+EGRRFF M Y I+P++EHYGC++DLLGR
Sbjct: 415 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRG 474
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
GL+ EA ++I+++P E NE+I +G+LLSACR++ NV+ E L ++ + +
Sbjct: 475 GLIKEAVDMIKRMPWEPNEVI---WGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYA 531
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
+L+NIYA A +W D+ R +MK G +K G S IE+N HEF VGD H E +I
Sbjct: 532 VLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTVGDRKHPESDQISD 591
Query: 592 MLDRMA 597
M+DR++
Sbjct: 592 MIDRLS 597
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/615 (34%), Positives = 330/615 (53%), Gaps = 40/615 (6%)
Query: 17 QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLF 76
++N T N L+ G L A +F + +++ +++ + G F +++
Sbjct: 95 RRNVFTWNSLLSM--FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152
Query: 77 SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV- 135
+ G +P FT V + G KVH +VVK GL V NS+++MYG
Sbjct: 153 LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 212
Query: 136 ------------------------------LGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
LG++ + LF+ MPD+ +VSWN I+G+
Sbjct: 213 GDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYN 272
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
+ A+ +F RM ++ PDE T+ S LSAC L N+ +GK++H YI E+ +
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332
Query: 225 IMGNALLDMYCKCGCLSEARELFDEM--PNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ Y K G + AR + D+ + NVI +T+++ GYV G +E AR++F
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 392
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RD+V WTAMI GY Q R DEA+ LFR M +P+ + L A+L+ CA L L+ GK
Sbjct: 393 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 452
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNG 401
IH + + + V+ A+I MYA+ G A +F ++ K+ +WTS+I LA +G
Sbjct: 453 IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHG 512
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ +A+ LF +M+ G +PD IT++GVLSACSH G V+EG+R+++ + +QI P++ HY
Sbjct: 513 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 572
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++DLL RAGL EA+E IR++P E + I +G+LLSACR++ N ++ E A L
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIA---WGSLLSACRVHKNAELAELAAEKLLS 629
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
I+ +S ++ +AN+Y++ RW D + + KE VRK G S I IH F D
Sbjct: 630 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDV 689
Query: 582 SHSEMKEIYSMLDRM 596
H + +Y+M RM
Sbjct: 690 VHPQRDAVYAMAARM 704
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 48/328 (14%)
Query: 197 LSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCK----CGCLSEARELFDEMP 251
L C N G+ IH R + L + + N LL Y + G L +AR LFDE+P
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIP 92
Query: 252 --NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
+NV W S++S + G+L AR +F P RD V WT M+ G + RF EA+
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
+M P +F L +L+ CA A G+ +H ++ + + VA +++ MY KC
Sbjct: 153 LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 212
Query: 370 GLIEKALEIFYE-------------------------------LREKDAASWTSIICGLA 398
G E A +F + ++ SW ++I G
Sbjct: 213 GDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYN 272
Query: 399 MNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
NG KAL+LFS+M+ + PD+ T VLSAC++ G V G++ Y ++ +
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYILRTE 327
Query: 458 LEH----YGCLIDLLGRAGLLDEAEELI 481
+ + LI ++G ++ A ++
Sbjct: 328 MAYNSQVTNALISTYAKSGSVENARRIM 355
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 323/596 (54%), Gaps = 38/596 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +F + +++ +++ + G F +++ + G +P FT V
Sbjct: 6 GRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVL 65
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV-------------------- 135
+ G KVH +VVK GL V NS+++MYG
Sbjct: 66 SSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVS 125
Query: 136 -----------LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
LG++ + LF+ MPD+ +VSWN I+G+ + A+ +F RM
Sbjct: 126 SWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHES 185
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
++ PDE T+ S LSAC L N+ +GK++H YI E+ + + NAL+ Y K G + A
Sbjct: 186 SMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENA 245
Query: 244 RELFDEM--PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
R + D+ + NVI +T+++ GYV G +E AR++F RD+V WTAMI GY Q R
Sbjct: 246 RRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGR 305
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
DEA+ LFR M +P+ + L A+L+ CA L L+ GK IH + + + V+ A
Sbjct: 306 NDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNA 365
Query: 362 LIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
+I MYA+ G A +F ++ K+ +WTS+I LA +G+ +A+ LF +M+ G +P
Sbjct: 366 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 425
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D IT++GVLSACSH G V+EG+R+++ + +QI P++ HY C++DLL RAGL EA+E
Sbjct: 426 DRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEF 485
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
IR++P E + I +G+LLSACR++ N ++ E A L I+ +S ++ +AN+Y++
Sbjct: 486 IRRMPVEPDAIA---WGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSAC 542
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
RW D + + KE VRK G S I IH F D H + +Y+M RM
Sbjct: 543 GRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARM 598
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 176/348 (50%), Gaps = 36/348 (10%)
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
M+ G++ + + +F EMP++D VSW V + G + RF +A+ M P +
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTAD-GFTPTQF 59
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T+ + LS+C + +G+++H ++ + L + N++L+MY KCG A +F+ M
Sbjct: 60 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF- 309
P ++V W +MVS + G+++ A LF+ P R IV W AMI GY Q +A+ LF
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
R + + PD+F + ++L+ CA LG + GK +H YI + ++ V ALI YAK
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239
Query: 370 GLI---------------------------------EKALEIFYELREKDAASWTSIICG 396
G + E A E+F + +D +WT++I G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
NG+ ++A++LF MI+ G +P+ T VLS C+ +D G++
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQI 347
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 41/253 (16%)
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
+ G+L AR +F P RD V WT M+ G + RF EA+ +M P +F L
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE--- 381
+L+ CA A G+ +H ++ + + VA +++ MY KCG E A +F
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 382 ----------------------------LREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ ++ SW ++I G NG KAL+LFS+M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 414 ISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----YGCLIDLL 468
+ + PD+ T VLSAC++ G V G++ Y ++ ++ + LI
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYILRTEMAYNSQVTNALISTY 236
Query: 469 GRAGLLDEAEELI 481
++G ++ A ++
Sbjct: 237 AKSGSVENARRIM 249
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/521 (39%), Positives = 307/521 (58%), Gaps = 38/521 (7%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK-ICNVKKLFDEMPDKDVVSWNVSI----- 161
+++H +KTG D ++ + I + +F +MP+ + WN +
Sbjct: 36 KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAE 95
Query: 162 --SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH----RY 215
H++ +A+ +F M + P+ T S L AC L GK+IH ++
Sbjct: 96 TNDEHLQ----SEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKF 151
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELF----------------DEMPNKNVICWT 259
E EF ++ N L+ MY C + +A LF + NV+ W
Sbjct: 152 GFHEDEF--VISN-LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWN 208
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
M+ G V G ++ A++LFD P R +V W MI+GY Q F EA+ LF+EMQ + P
Sbjct: 209 IMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDP 268
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+ LV++L A++GALE GKWIH Y +N+I +D V+ +AL++MY+KCG I++AL++F
Sbjct: 269 NYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVF 328
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
L +++A +W++II AM+G+ A+ F M G P+D+ +IG+LSACSH GLV+
Sbjct: 329 ETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVE 388
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EGR FF+ M +V +QP++EHYGC++DLLGRAG L+EAEELIR +P E +++I + AL
Sbjct: 389 EGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVI---WKAL 445
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
L AC+++ N+ MGE++A L ++ DS + L+N+YAS WE V VR KMK M +R
Sbjct: 446 LGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIR 505
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
K PGCS IEI+GIIHEFLV D SHS+ KEI +ML M+ L
Sbjct: 506 KDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKL 546
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 217/500 (43%), Gaps = 118/500 (23%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LKQ+ A + G Q+P T +++ FC S ++ YA +F + P +N +++
Sbjct: 35 LKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSR-DIDYARAVFRQMPEPNCFCWNTILRVL 93
Query: 64 AKKGSFR---KSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
A+ ++L+LFS + G V P+ FT+P V KA +++G+++HG +VK G
Sbjct: 94 AETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGF 153
Query: 120 EFDTYVCNSIMDMYGV-------------------------------------------- 135
D +V ++++ MY +
Sbjct: 154 HEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDG 213
Query: 136 ---LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
LG I + K LFDEMP + VVSWNV ISG+ + F +A+++F+ M Q N+ P+ T
Sbjct: 214 QVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEM-QSSNIDPNYVT 272
Query: 193 VVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
+VS L A + LELGK IH Y + ++E ++G+AL+DMY KCG + EA ++F+ +P
Sbjct: 273 LVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLP 332
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+N I W +A+I + R ++A+ F
Sbjct: 333 KRNAITW-------------------------------SAIIGAFAMHGRAEDAIIHFHL 361
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M + P+ + +L+ C+ G +E+G+ ++ V V IE Y
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHM------VKVVGLQPRIEHYG---- 411
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
++ L G + +A EL M +PDD+ + +L A
Sbjct: 412 --------------------CMVDLLGRAGHLEEAEELIRNM---PIEPDDVIWKALLGA 448
Query: 432 CSHGGLVDEGRRFFNTMTEV 451
C + G R T+ E+
Sbjct: 449 CKMHKNLKMGERVAETLMEL 468
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 175/369 (47%), Gaps = 34/369 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A+ +F + ++++N++I +A+ G F +++ LF +++ + P+ T V
Sbjct: 218 GDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVL 277
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A+ +G ++ G+ +H Y K +E D + ++++DMY G I ++F+ +P ++ +
Sbjct: 278 PAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAI 337
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W+ I R EDA+ F M + + P++ + LSAC+ +E G+ +
Sbjct: 338 TWSAIIGAFAMHGRAEDAIIHFHLMGKA-GVTPNDVAYIGILSACSHAGLVEEGRSFFSH 396
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG---YVNCG 269
+ + + P + + ++D+ + G L EA EL MP + + W +++ + N
Sbjct: 397 MVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLK 456
Query: 270 QLEK-ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR-EMQIIRLKPDKFILVAL 327
E+ A L + +P D + A+ N Y + EAVA R +M+ + ++ D
Sbjct: 457 MGERVAETLMELAP-HDSGSYVALSNLYASLGNW-EAVARVRLKMKGMDIRKD------- 507
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDA-----VVATALIEMYAKC---GLIEKALEIF 379
GC+ + IHG I+E + D+ + L EM K G LE+F
Sbjct: 508 -PGCSWIE-------IHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVF 559
Query: 380 YELREKDAA 388
E++ A
Sbjct: 560 LNTDEQERA 568
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 339/599 (56%), Gaps = 39/599 (6%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L QI AQ+ GL ++ + K + + G + YA K+F P + +N +I+
Sbjct: 86 HLNQIHAQLVVSGLVESGFLVTKFV--NASWNIGEIGYARKVFDEFPEPSVFLWNAIIRG 143
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
++ F ++ ++S+++ GV+PD FT P V KA + ++ G++VHG + + G E D
Sbjct: 144 YSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESD 203
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V N ++ +Y G++ + +F+ + D+++VSW ISG+ + +A+ +F +MRQ
Sbjct: 204 VFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQ 263
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLS 241
N+ PD +VS L A T +++LE GK IH + LEF P + +L MY KCG +
Sbjct: 264 R-NVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVM 322
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
AR FD+M NV+ W +M+SGY NGY
Sbjct: 323 VARSFFDQMEIPNVMMWNAMISGYAK--------------------------NGYT---- 352
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+EAV LF+EM ++ D + + + CAQ+G+L+ KW+ YIN+ D V TA
Sbjct: 353 -NEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTA 411
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+M+AKCG ++ A E+F +KD W+++I G ++G+ A++LF M G P+
Sbjct: 412 LIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPN 471
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
D+TF+G+L+AC+H GLV+EG F++M + Y I+ + +HY C++DLLGR+G L+EA + I
Sbjct: 472 DVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFI 530
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P E V ++GALL AC+IY +V +GE A L ++ ++ + L+N+YAS+
Sbjct: 531 TTMPIEPG---VSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSR 587
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W+ V VR M+E G+ K G S IEING + F VGD SH KEI+ L+ + + L
Sbjct: 588 LWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRL 646
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/638 (34%), Positives = 344/638 (53%), Gaps = 48/638 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEK--IFGSIQSPCLLAYNL 58
++Q +Q A I + GL + KL+ +H ++ N+ +A+ + + P + +++
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLL---SHYAN-NMCFADATLVLDLVPEPNVFSFST 84
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
LI AF+K F +L FS++ RG+ PDN P KA L +K +VHG +G
Sbjct: 85 LIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSG 144
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ D++V +S++ MY +I + ++FD M + DVVSW+ ++ + + ++A +F
Sbjct: 145 FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFS 204
Query: 179 RMRQG---CNLM-------------------------------PDEGTVVSTLSACTALK 204
M NL+ PD T+ S L A L+
Sbjct: 205 EMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLE 264
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+L +G IH Y I Q L + +AL+DMY KC C SE ++FD+M + +V + +
Sbjct: 265 DLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIF 324
Query: 264 GYVNCGQLEKARDLF----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
G GQ+E + LF D+ ++V WT+MI Q R EA+ LFREMQI +KP
Sbjct: 325 GLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKP 384
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+ + LL C + AL GK H + I+ D V +ALI+MYAKCG I+ + F
Sbjct: 385 NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICF 444
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
+ K+ W ++I G AM+GK +A+E+F M G KPD I+F VLSACS GL +
Sbjct: 445 DGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTE 504
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG +FN+M+ Y I+ ++EHY C++ LL RAG L++A +IR++P + + +GAL
Sbjct: 505 EGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACV---WGAL 561
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
LS+CR++ NV +GE A L ++E + + LL+NIYAS W +V VR MK G+R
Sbjct: 562 LSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLR 621
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
K PGCS IE+ +H L GD SH +M +I LD+++
Sbjct: 622 KNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLS 659
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 40/185 (21%)
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
+L Q + H +I + + D +AT L+ YA A + + E + S++++I
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS-----------HG-------- 435
+ + + AL FSQM++ G PD+ + AC+ HG
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 436 ----------------GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
+ + R F+ M E P + + L+ R G +DEA+
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFE-----PDVVSWSALVAAYARQGCVDEAKR 201
Query: 480 LIRKI 484
L ++
Sbjct: 202 LFSEM 206
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/521 (39%), Positives = 317/521 (60%), Gaps = 12/521 (2%)
Query: 86 PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL 145
P + T+ + K L ++K+ +H VV GL +T + ++ Y + + +
Sbjct: 53 PSHSTFVQLLKKRPSLTQIKQ---IHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109
Query: 146 FDEMPD-KDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTAL 203
FD+ P + WN+ I + K ++++ +F +M G D+ T +AC+
Sbjct: 110 FDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRH 169
Query: 204 KNLE-LGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L G+ +H + ++ E +GN+L++MY + +A+ +FDEMP ++VI WTS+
Sbjct: 170 PTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSV 229
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPD 320
V GY G+L +AR+LFD P R+ V W M+ GYV ++EA+ F +M +KP+
Sbjct: 230 VKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPN 289
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+ +LV++L+ CA LGAL+QGKWIH YI++NRI + + ++TALI+MYAKCG I+ A +F
Sbjct: 290 EAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFD 349
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
L ++D +WTS+I GL+M+G + L FS+M++ G KPDDIT +GVL+ CSH GLV+E
Sbjct: 350 GLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEE 409
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
G F+ M ++ I PKLEHYGCLIDLLGRAG L+ A E I+ +P E + V + ALL
Sbjct: 410 GLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPD---VVAWRALL 466
Query: 501 SACRIYGNVDMGEKLA-ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
SACRI+G+VD+GE++ + E + LL+N+YAS +WE VT VR+ M + G
Sbjct: 467 SACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSE 526
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PGCS IEI+G++HEFL D H + EI L+ + + +
Sbjct: 527 GCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRI 567
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 219/476 (46%), Gaps = 88/476 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHG--NLLYAEKIFGSIQS-PCLLAYN 57
+TQ+KQI AQ+ GL QN L L+ H G NL +A +F S P + +N
Sbjct: 68 LTQIKQIHAQVVTHGLAQNTSLLGPLI----HSYIGCRNLSFARIVFDQFPSLPPTIIWN 123
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERG--VSPDNFTYPFVFKAVGWLGEVKK-GEKVHGYV 114
L+I+A++K S ++SL LF ++ G S D +T+ FVF A ++ GE VHG V
Sbjct: 124 LMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMV 183
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV-------------------- 154
VK G E D +V NS+++MY + ++ + K++FDEMP +DV
Sbjct: 184 VKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRAR 243
Query: 155 -----------VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
VSW V ++G+V + +A+ F M + P+E +VS LSAC L
Sbjct: 244 ELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHL 303
Query: 204 KNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
L+ GK IH YI++ + + + AL+DMY KCG + AR +FD + ++++ WTSM+
Sbjct: 304 GALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMI 363
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
SG G + LWT F EM KPD
Sbjct: 364 SGLSMHGLGAEC-------------LWT------------------FSEMLAEGFKPDDI 392
Query: 323 ILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
L+ +L GC+ G +E+G I H I I LI++ + G +E A E
Sbjct: 393 TLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKS 452
Query: 382 LR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
+ E D +W +++ ++G ++ + I I L SHGG
Sbjct: 453 MPMEPDVVAWRALLSACRIHGDVDLGERI-------------INHIAELCPGSHGG 495
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/369 (18%), Positives = 158/369 (42%), Gaps = 20/369 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFV 94
G L+ A ++F + +++ +++ + + ++L F+ L V P+ +
Sbjct: 237 GELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSI 296
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + +G+ +H Y+ K + + + +++DMY G+I +++FD + +D+
Sbjct: 297 LSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDL 356
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
++W ISG + + F M PD+ T++ L+ C+ +E G I
Sbjct: 357 LTWTSMISGLSMHGLGAECLWTFSEMLAE-GFKPDDITLLGVLNGCSHSGLVEEGLSIFH 415
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+ P + + L+D+ + G L A E MP +V+ W +++S G +
Sbjct: 416 DMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDV 475
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+ + + + ++ + GYV + ++ + + +R K + GC
Sbjct: 476 DLGERIINH--IAELCP-GSHGGGYVLLSNLYASMGQWESVTKVR----KAMSQRGSEGC 528
Query: 332 AQLGALEQGKWIHGYINENRI-----TVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
+E +H ++ +++ ++ + L + + G + ++ ++L E+D
Sbjct: 529 PGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEED 588
Query: 387 ---AASWTS 392
A SW S
Sbjct: 589 KEQAVSWHS 597
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/468 (42%), Positives = 293/468 (62%), Gaps = 13/468 (2%)
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVS 195
G + + +F+++P+ + N I G+ A+ ++ M QG L PD T S
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQG--LDPDRFTFPS 83
Query: 196 TLSACTALKNLELGKEIHRYINQELEFT--PIMGNALLDMYCKCGCLSEARELFDEMPNK 253
+C L GK++H + + +L F + N L++MY CGCL AR++FD+M NK
Sbjct: 84 LFKSCGVLCE---GKQLHCH-STKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK 139
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPV-RDIVLWTAMINGYVQFNRFDEAVALFREM 312
+V+ W +M+ Y +A LF R + ++ W MING+V+ + ++EA++LF EM
Sbjct: 140 SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM 199
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
Q+ +K DK + +LL C LGALE GKW+H YI + +I VD + TAL++MYAKCG I
Sbjct: 200 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 259
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
E A+ +F E+ EKD +WT++I GLAM G+ KALELF +M KPD ITF+GVL+AC
Sbjct: 260 ESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 319
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SH GLV+EG +FN+M Y IQP +EHYGC++D+LGRAG + EAE+LI+ +P + +
Sbjct: 320 SHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 379
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+ LLSACRI+GN+ + E+ A L +++ K+ + LL+NIY+S WE +R+
Sbjct: 380 LV---GLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMREL 436
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
M E ++K PGCS+IE+ G++HEF+ GD SH + EIY LD M + L
Sbjct: 437 MVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRL 484
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 218/473 (46%), Gaps = 106/473 (22%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P + +K++ FC G+L YA +F I +P N +I+ + K R+++L +
Sbjct: 9 DPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQL 68
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
+ +G+ PD FT+P +FK+ G L E G+++H + K G D Y+ N++M+MY G
Sbjct: 69 MMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 125
Query: 139 ICNVKKLFDEMPDKDVVS--------------------------------WNVSISGHVK 166
+ + +K+FD+M +K VVS WN+ I+GHV+
Sbjct: 126 LVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVE 185
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPI 225
+E+A+ +F M Q + D+ T+ S L ACT L LELGK +H YI +E +E
Sbjct: 186 DSDYEEALSLFNEM-QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA 244
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+G AL+DMY KCG + A +F EMP K+V+ WT+++ G CGQ K
Sbjct: 245 LGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLK------------ 292
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
A+ LF EMQ+ +KPD V +L C+ G + +G
Sbjct: 293 -------------------ALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGI---A 330
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
Y N M K G I+ ++E + ++ L G+I +
Sbjct: 331 YFN---------------SMPNKYG-IQPSIE-----------HYGCMVDMLGRAGRIAE 363
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACS-HGGLVDEGRRFFNTMTEVYQIQPK 457
A +L M PD +G+LSAC HG LV R ++ ++ PK
Sbjct: 364 AEDLIQNM---PMAPDYFVLVGLLSACRIHGNLVVAER----AAQQLIELDPK 409
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/638 (34%), Positives = 344/638 (53%), Gaps = 48/638 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEK--IFGSIQSPCLLAYNL 58
++Q +Q A I + GL + KL+ +H ++ N+ +A+ + + P + +++
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLL---SHYAN-NMCFADATLVLDLVPEPNVFSFST 84
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
LI AF+K F +L FS++ RG+ PDN P KA L +K +VHG +G
Sbjct: 85 LIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSG 144
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ D++V +S++ MY +I + ++FD M + DVVSW+ ++ + + ++A +F
Sbjct: 145 FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFS 204
Query: 179 RMRQG---CNLM-------------------------------PDEGTVVSTLSACTALK 204
M NL+ PD T+ S L A L+
Sbjct: 205 EMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLE 264
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+L +G IH Y I Q L + +AL+DMY KC C SE ++FD+M + +V + +
Sbjct: 265 DLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIF 324
Query: 264 GYVNCGQLEKARDLF----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
G GQ+E + LF D+ ++V WT+MI Q R EA+ LFREMQI +KP
Sbjct: 325 GLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKP 384
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+ + LL C + AL GK H + I+ D V +ALI+MYAKCG I+ + F
Sbjct: 385 NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICF 444
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
+ K+ W ++I G AM+GK +A+E+F M G KPD I+F VLSACS GL +
Sbjct: 445 DGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTE 504
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG +FN+M+ Y I+ ++EHY C++ LL RAG L++A +IR++P + + +GAL
Sbjct: 505 EGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACV---WGAL 561
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
LS+CR++ NV +GE A L ++E + + LL+NIYAS W +V VR MK G+R
Sbjct: 562 LSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLR 621
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
K PGCS IE+ +H L GD SH +M +I LD+++
Sbjct: 622 KNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLS 659
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 40/185 (21%)
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
+L Q + H +I + + D +AT L+ YA A + + E + S++++I
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS-----------HG-------- 435
+ + + AL FSQM++ G PD+ + AC+ HG
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 436 ----------------GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
+ + R F+ M E P + + L+ R G +DEA+
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFE-----PDVVSWSALVAAYARQGCVDEAKR 201
Query: 480 LIRKI 484
L ++
Sbjct: 202 LFSEM 206
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/591 (33%), Positives = 346/591 (58%), Gaps = 41/591 (6%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
QL+QI A++ +GLQ + + KL+ + S+G++ +A ++F + P + +N +I+
Sbjct: 35 AQLRQIHARLLVLGLQFSGFLITKLIHASS--SYGDITFARQVFDDLPRPQVFPWNAIIR 92
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ F+ +LL++SK++ VSPD+FT+P + KA G L ++ G VH V + G E
Sbjct: 93 GYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEA 152
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFD--EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V N ++ +Y ++ + +F+ +P++ +VSW +S + + +A+++F +
Sbjct: 153 DVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQ 212
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
MR+ ++ PD +VS L+A T L++LE G+ IH + LE P + +L MY KC
Sbjct: 213 MRK-MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKC- 270
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
GQ+ A+ LFD+ +++LW AMI+GY +
Sbjct: 271 ------------------------------GQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+A+ LF EM ++PD + + ++ CAQ+G+LEQ +W+ Y++ + D +
Sbjct: 301 NGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFI 360
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
++ALI+M+AKCG +E A +F ++D W+++I G ++G+ +A+ L+ M G
Sbjct: 361 SSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGV 420
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P+D+TF+G+L AC+H G+V EG FFN M + ++I P+ +HY C+IDLLGRAG LD+A
Sbjct: 421 HPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAY 479
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+I+ +P + V ++GALLSAC+ + +V++G+ A L I+ ++ + L+N+YA
Sbjct: 480 EVIKCMPVQPG---VTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+A W+ V VR +MKE G+ K GCS +E+ G + F VGD SH +EI
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEI 587
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/627 (34%), Positives = 339/627 (54%), Gaps = 56/627 (8%)
Query: 20 PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC----LLAYNLLIKAFAKKGSFRKSLLL 75
P+ + + + + + GNL A +IF ++P + YN +I ++ ++ L
Sbjct: 77 PDVIARTTLITAYSALGNLKMAREIFN--ETPLDMRDTVFYNAMITGYSHMNDGHSAIEL 134
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWL-GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY- 133
F +R PD+FT+ V A + + ++ ++HG VVK G+E V N+++ +Y
Sbjct: 135 FRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYV 194
Query: 134 --------GVLGKICNVKKLFDEMPDKDV------------------------------- 154
+ + +KLFDEMP ++
Sbjct: 195 KCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPG 254
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
++WN ISG++ FEDA+ +FR+MR + DE T S +SAC LGK++H
Sbjct: 255 IAWNAMISGYLHHGLFEDALTLFRKMRL-LGVQVDESTYTSVISACADGGFFLLGKQVHA 313
Query: 215 YI-----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
YI N + +F +GN L+ +Y K G + AR++F EMP K++I W +++SGYVN G
Sbjct: 314 YILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAG 373
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
++E+A+ F + P ++++ WT MI+G Q ++A+ LF +M++ +P+ + +T
Sbjct: 374 RMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAIT 433
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C+ LGALE G+ +H I V A+I MYA+CG++E A +F + D S
Sbjct: 434 ACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVS 493
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W S+I L +G KA+EL+ QM+ G PD TF+ VLSACSH GLV+EG R+FN+M
Sbjct: 494 WNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSML 553
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
E Y I P +HY +IDL RAG +A+ +I +P E P++ ALL+ CR +GN+
Sbjct: 554 ENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEAR---APIWEALLAGCRTHGNM 610
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
D+G + A L K+ + + LL+N+YAS RW DV R+ M++ GV+K P CS E+
Sbjct: 611 DLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEV 670
Query: 570 NGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+H FLV D H E+ IY+ L+++
Sbjct: 671 ENKVHVFLVDDTVHPEVLSIYNYLEKL 697
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 215/464 (46%), Gaps = 81/464 (17%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS---- 156
L VHG+V+ +G + ++ N ++D+Y +KLFDE+P DV++
Sbjct: 26 LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85
Query: 157 -----------------------------WNVSISGHVKCMRFEDAVDVFRRMRQGCNLM 187
+N I+G+ A+++FR MR N
Sbjct: 86 ITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWA-NFQ 144
Query: 188 PDEGTVVSTLSACTAL--KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG------- 238
PD+ T S LSA T + + G+ + +E P + NALL +Y KC
Sbjct: 145 PDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSS 204
Query: 239 --CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
++ AR+LFDEMP +N WT++++GYV G L AR++ D + + W AMI+GY
Sbjct: 205 SSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGY 264
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+ F++A+ LFR+M+++ ++ D+ ++++ CA G GK +H YI +N + D
Sbjct: 265 LHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDR 324
Query: 357 ----VVATALIEMYAKCGLIEKALEIFYE------------------------------- 381
V LI +Y K G ++ A +IFYE
Sbjct: 325 DFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQ 384
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ EK+ +WT +I GLA NG +AL+LF+QM G +P+D F G ++ACS G ++ G
Sbjct: 385 MPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENG 444
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
R+ + + L +I + R G+++ A + +P
Sbjct: 445 RQLHAQIVHLGH-DSTLSVGNAMITMYARCGIVEAARTMFLTMP 487
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 27/371 (7%)
Query: 203 LKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L + L + +H + I + + N L+D+Y K AR+LFDE+P +VI T++
Sbjct: 26 LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85
Query: 262 VSGYVNCGQLEKARDLFDRSPV--RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
++ Y G L+ AR++F+ +P+ RD V + AMI GY N A+ LFR M+ +P
Sbjct: 86 ITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQP 145
Query: 320 DKFILVALLTGCAQLGALE-QGKWIHGYINENRITVDAVVATALIEMYAKCG-------- 370
D F ++L+ + E Q +HG + + I + V AL+ +Y KC
Sbjct: 146 DDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSS 205
Query: 371 -LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
L+ A ++F E+ +++ WT++I G NG + A E+ M + I + ++
Sbjct: 206 SLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTM----TEQPGIAWNAMI 261
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE----LIRKIP 485
S H GL ++ F M + +Q Y +I G ++ +++
Sbjct: 262 SGYLHHGLFEDALTLFRKM-RLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNEL 320
Query: 486 NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD-SSFHTLLANIYASANRWE 544
N + + ++ + L++ YG VD K + ++ KD +++TLL+ Y +A R E
Sbjct: 321 NPDRDFLLSVGNTLITLYWKYGKVDGARK---IFYEMPVKDIITWNTLLSG-YVNAGRME 376
Query: 545 DVTNVRQKMKE 555
+ + +M E
Sbjct: 377 EAKSFFAQMPE 387
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/486 (38%), Positives = 305/486 (62%), Gaps = 5/486 (1%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++HG+++ L+ D + +D LG +F D+ +N +I K
Sbjct: 42 QIHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTS 101
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMG 227
+A+ ++ R+R L PD ++ S L A L +E+G++IH + ++ L+ +
Sbjct: 102 SPINAIWLYTRIRID-GLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVA 160
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
+L+ MY CG +S+AR+LFD + K+V W +MV+GYV G+L+ AR +F+ P R+++
Sbjct: 161 TSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVI 220
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
WT +I GY Q NR EA+ LFR+MQ+ ++PD+ ++A+L+ CA LGALE G+WIH YI
Sbjct: 221 SWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYI 280
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
++ + + ALI+MYAK G I +ALE+F +++K +W+++I LA++G +A+
Sbjct: 281 EKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAI 340
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
++F +M +P+++TF+ +LSACSH G+VD GR +F+ M +Y+I+PK+EHYGC+IDL
Sbjct: 341 DMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDL 400
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
L RAG L EA++L+ +P E N +I +G+LL+A + + ++ + L K+E +S
Sbjct: 401 LARAGYLQEAQKLLHDMPFEANAMI---WGSLLAASNTHRDAELAQLALKHLAKLEPGNS 457
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ LL+N YA+ +W + VR+ M+ GV+K PG S IEIN I++EFL GD S S++
Sbjct: 458 GNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVH 517
Query: 588 EIYSML 593
EIY +L
Sbjct: 518 EIYHVL 523
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 205/428 (47%), Gaps = 68/428 (15%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L QI + L Q+ L++ + CT S G YA IF + P L YN IKA
Sbjct: 39 HLYQIHGFMLHRALDQDNLFLSQFIDACT--SLGLSSYAFSIFSNKTHPDLRLYNTAIKA 96
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+K S ++ L++++R G+ PD+++ P V KAV L V+ G ++H V + L+ D
Sbjct: 97 LSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMD 156
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK---------------- 166
V S++ MY G + + +KLFD + KDV WN ++G+VK
Sbjct: 157 VNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQ 216
Query: 167 ---------------CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
R +A+++FR+M Q + PDE +++ LSAC L LELG+
Sbjct: 217 RNVISWTTLIAGYAQTNRPHEAIELFRKM-QLEEVEPDEIAMLAVLSACADLGALELGEW 275
Query: 212 IHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH YI + L + NAL+DMY K G + A E+F+ M K+VI W+++++ G
Sbjct: 276 IHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHG- 334
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+ G EA+ +F M+ +++P++ VA+L+
Sbjct: 335 ----------------------LGG--------EAIDMFLRMEKAKVRPNEVTFVAILSA 364
Query: 331 CAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAA 388
C+ +G ++ G++ + +I +I++ A+ G +++A ++ +++ E +A
Sbjct: 365 CSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAM 424
Query: 389 SWTSIICG 396
W S++
Sbjct: 425 IWGSLLAA 432
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 329/615 (53%), Gaps = 40/615 (6%)
Query: 17 QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLF 76
++N T N L+ G L A +F + +++ +++ + G F +++
Sbjct: 95 RRNVFTWNSLLSM--FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152
Query: 77 SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV- 135
+ G +P FT V + G KVH +VVK GL V NS+++MYG
Sbjct: 153 LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 212
Query: 136 ------------------------------LGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
LG++ + LF+ MP + +VSWN I+G+
Sbjct: 213 GDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYN 272
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
+ A+ +F RM ++ PDE T+ S LSAC L N+ +GK++H YI E+ +
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332
Query: 225 IMGNALLDMYCKCGCLSEARELFDEM--PNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ Y K G + AR + D+ + NVI +T+++ GYV G +E AR++F
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 392
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RD+V WTAMI GY Q R DEA+ LFR M +P+ + L A+L+ CA L L+ GK
Sbjct: 393 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 452
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNG 401
IH + + + V+ A+I MYA+ G A +F ++ K+ +WTS+I LA +G
Sbjct: 453 IHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHG 512
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ +A+ LF +M+ G +PD IT++GVLSACSH G V+EG+R+++ + +QI P++ HY
Sbjct: 513 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 572
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++DLL RAGL EA+E IR++P E + I +G+LLSACR++ N ++ E A L
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIA---WGSLLSACRVHKNAELAELAAEKLLS 629
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
I+ +S ++ +AN+Y++ RW D + + KE VRK G S I IH F D
Sbjct: 630 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDV 689
Query: 582 SHSEMKEIYSMLDRM 596
H + +Y+M RM
Sbjct: 690 VHPQRDAVYAMAARM 704
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 48/328 (14%)
Query: 197 LSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCK----CGCLSEARELFDEMP 251
L C N G+ IH R + L + + N LL Y + G L +AR LFDE+P
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIP 92
Query: 252 --NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
+NV W S++S + G+L AR +F P RD V WT M+ G + RF EA+
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
+M P +F L +L+ CA A G+ +H ++ + + VA +++ MY KC
Sbjct: 153 LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 212
Query: 370 GLIEKALEIFYELREKDAA-------------------------------SWTSIICGLA 398
G E A +F + + + SW ++I G
Sbjct: 213 GDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYN 272
Query: 399 MNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
NG KAL+LFS+M+ + PD+ T VLSAC++ G V G++ Y ++ +
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYILRTE 327
Query: 458 LEH----YGCLIDLLGRAGLLDEAEELI 481
+ + LI ++G ++ A ++
Sbjct: 328 MAYNSQVTNALISTYAKSGSVENARRIM 355
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 320/603 (53%), Gaps = 42/603 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ LKQI + L + +N L+ +F + LL F Q P + YN
Sbjct: 26 VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLL-----FSHTQFPNIFLYN 80
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI F F ++L LF +R+ G+ FT+P V KA K G +H VVK
Sbjct: 81 SLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G D S++ +Y G++ + KLFDE+PD+ VV+W SG+ R +A+D+F
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
++M + + PD +V LSAC + +L+ G+ I +Y+ +E+E
Sbjct: 201 KKMVE-MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEM--------------- 243
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
KN T++V+ Y CG++EKAR +FD +DIV W+ MI GY
Sbjct: 244 --------------QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA 289
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ E + LF +M LKPD+F +V L+ CA LGAL+ G+W I+ + +
Sbjct: 290 SNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF 349
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+A ALI+MYAKCG + + E+F E++EKD + I GLA NG + + +F Q G
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
PD TF+G+L C H GL+ +G RFFN ++ VY ++ +EHYGC++DL GRAG+LD+A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
LI +P N I+ +GALLS CR+ + + E + L +E ++ + L+NIY
Sbjct: 470 YRLICDMPMRPNAIV---WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIY 526
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ RW++ VR M + G++K+PG S IE+ G +HEFL D SH +IY+ L+ +
Sbjct: 527 SVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLG 586
Query: 598 KTL 600
+
Sbjct: 587 NEM 589
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/605 (36%), Positives = 329/605 (54%), Gaps = 52/605 (8%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPS---HGNLLYAEKIFGSIQSPCLLAYNLLI 60
L QI A I + + N L K + C S H L+ + C N +I
Sbjct: 18 LLQIHALILRNAIDANVNILTKFITTCGQLSSTRHARHLFDNRSHRGDTFLC----NSMI 73
Query: 61 KAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
K+ + L+ LR E PDNFT+ + K V +G + HG+VVK G
Sbjct: 74 KSHVVMRQLADAFTLYKDLRRETCFVPDNFTFTVLAKCCALRMAVWEGLETHGHVVKIGF 133
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
FD YV +++DMY G + +K+F++MPD+ +VSW I G+V+ +A +F+
Sbjct: 134 CFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVRRGDMGNAWFLFK- 192
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
LMP G++ + N L+D Y K G
Sbjct: 193 ------LMP--------------------GRDSAAF------------NLLIDGYVKVGD 214
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ AR LFDEMP +NVI WTSM+ GY N G + AR LFD P +++V W AMI GY Q
Sbjct: 215 MESARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQN 274
Query: 300 NRFDEAVALFREMQIIRL-KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ EA+ LFRE+Q + +P++ +V++L A LGALE G+W+H ++ ++ V
Sbjct: 275 KQPHEALKLFRELQSSTVFEPNEVTVVSILPAIATLGALELGEWVHRFVQRKKLDAAVNV 334
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T+L++MY KCG I KA ++F E+ +K+ A+W ++I G AMNG ++ALE FS+M G
Sbjct: 335 CTSLVDMYLKCGEISKARKVFSEIPKKETATWNALINGFAMNGLASEALEAFSEMQQEGI 394
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KP+DIT GVLSACSHGGLV+EG+ F M E + PK+EHYGCL+DLLGRAG LDEAE
Sbjct: 395 KPNDITMTGVLSACSHGGLVEEGKGQFKAMIE-SGLSPKIEHYGCLVDLLGRAGCLDEAE 453
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
LI+ +P E N II+ + AC +V +++ +E ++ + ++ N+YA
Sbjct: 454 NLIKSMPFEANGIILSSFSF---ACGFSNDVTRAQRVLNQAVNMEPGNNGIYVMMRNLYA 510
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
RW+DV + M+ G +K G S+IE++ + EF+ G +H ++ I S++ ++
Sbjct: 511 MEERWKDVKEINGLMRRRGAKKEVGSSAIEVDSRVSEFISGGIAHPQLDVIESVIGQLWI 570
Query: 599 TLLDS 603
+ DS
Sbjct: 571 HMRDS 575
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 303/490 (61%), Gaps = 11/490 (2%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI-CNVKKLFDEMPDKDVVSWNVSISGHVKC 167
++H +++ GL + + + Y LG++ C+V +F+ + +V S++ I HV+
Sbjct: 65 QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVF-VFNTFDEPNVFSFSAIIHSHVQS 123
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIM 226
F+ A + +M C + P+ T S L +C+ LE GK +H + I L +
Sbjct: 124 RLFDRAFGYYSQMLS-CGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYV 178
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
L+D+Y + G + AR+LFD+MP ++++ T+M++ Y G+L+KAR LF+ RD+
Sbjct: 179 RTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDV 238
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V W MI GY Q +E++ LFR M + + P++ ++A+L+ C QLGALE G+WIH Y
Sbjct: 239 VCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSY 298
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I I ++ V TALI+MY+KCG +E A +F +R+KD +W S+I G AM+G A
Sbjct: 299 IENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHA 358
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L+LF +M G KP DITFIG+LSAC HGGLV+EGR FF M + Y I+PK+EHYGC+++
Sbjct: 359 LQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVN 418
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LLGRAG L+EA L++ + + + L+G LL CR++ N+ +GE++A L + +
Sbjct: 419 LLGRAGHLEEAYGLVKNMTIAADPV---LWGTLLGCCRLHVNIKLGEEIAKFLVDQKLAN 475
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
S + LL+N+YA+ WE V +R MKE G+ K GCSSIE++ +HEF+ G+ H +
Sbjct: 476 SGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKS 535
Query: 587 KEIYSMLDRM 596
KEIY ML+ +
Sbjct: 536 KEIYVMLNEI 545
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 203/452 (44%), Gaps = 86/452 (19%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L QI A + + GL NP KL ++ + G L + +F + P + +++ +I
Sbjct: 60 VAHLLQIHASLLRRGLYHNPILNFKLQR--SYAALGRLDCSVFVFNTFDEPNVFSFSAII 117
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + F ++ +S++ GV P+ FT+ V K+ ++ G+ +H +K GL
Sbjct: 118 HSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLG 173
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMP------------------------------ 150
D YV ++D+Y G + ++LFD+MP
Sbjct: 174 SDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGM 233
Query: 151 -DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
++DVV WNV I G+ + +++ +FRRM +P+E TV++ LSAC L LE G
Sbjct: 234 KERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVA-KAIPNEVTVLAVLSACGQLGALESG 292
Query: 210 KEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ IH YI N+ ++ +G AL+DMY KCG L +AR +FD + +K+V+ W SM+ GY
Sbjct: 293 RWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYA-- 350
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
++G+ Q A+ LF EM KP + +L
Sbjct: 351 ------------------------MHGFSQ-----HALQLFEEMTETGHKPTDITFIGIL 381
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY-------AKCGLIEKALEIFYE 381
+ C G +E+G+ R+ D IE Y + G +E+A +
Sbjct: 382 SACGHGGLVEEGRSFF------RLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKN 435
Query: 382 LR-EKDAASWTSII--CGLAMNGKINKALELF 410
+ D W +++ C L +N K+ + + F
Sbjct: 436 MTIAADPVLWGTLLGCCRLHVNIKLGEEIAKF 467
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/500 (38%), Positives = 305/500 (61%), Gaps = 6/500 (1%)
Query: 103 EVKKGEKVHGYVVKTGLE-FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
++++ +++H + GL V I Y G++ + +KLFDE+P+ D++S+ +
Sbjct: 26 KLRELQRIHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLISFTSLM 85
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-EL 220
S H++ +A+ +F R+ + PD VV LSA + + +G+ +H I + L
Sbjct: 86 SLHLQLDNQREAISLFARVVAAGH-RPDGFAVVGALSASSGAGDQVVGRAVHGLIFRLGL 144
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ ++GNAL+DMY +CG A ++FD M K+ + W SM+ GY+ C ++ A FD+
Sbjct: 145 DGEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKCAGVDSALSFFDQ 204
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
PVR +V WTA+I G+VQ + A+ LF M + +P +V +L+ CA +GAL+ G
Sbjct: 205 VPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGALDLG 264
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+ IHGY ++ +++ +V+ AL++MYAK G IE A +F E++ KD+ +WT++I +
Sbjct: 265 RVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTMISCCTVQ 324
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G KALELF M+ G P+ +TF+ VLSACSH GL++EG F+ M ++Y+I P LEH
Sbjct: 325 GDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLYKIDPLLEH 384
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC+IDLLGR GLL+EAE L I + N E + ++ +LLSAC + GN + E +
Sbjct: 385 YGCMIDLLGRGGLLEEAEAL---IADMNVEPDIVIWRSLLSACLVRGNNRLAEIAGKEIV 441
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
K E D + LL N+YAS+N+W + +RQ+M + + K PGCS IEI+G +HEFLV D
Sbjct: 442 KREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKPGCSWIEIDGAVHEFLVED 501
Query: 581 PSHSEMKEIYSMLDRMAKTL 600
+H +EIY L+ M++ L
Sbjct: 502 KTHDARREIYETLEYMSRQL 521
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 205/460 (44%), Gaps = 68/460 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +L++I A GL + ++++ +F + G + A K+F I +P L+++ L+
Sbjct: 27 LRELQRIHALAIAHGLHPHQQSVS-CKIFRCYADFGRVADARKLFDEIPNPDLISFTSLM 85
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + R+++ LF+++ G PD F A G+ G VHG + + GL+
Sbjct: 86 SLHLQLDNQREAISLFARVVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIFRLGLD 145
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ V N+++DMY GK + K+FD M KD V+W + G++KC + A+ F ++
Sbjct: 146 GEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKCAGVDSALSFFDQV 205
Query: 181 ------------------RQGCNLM------------PDEGTVVSTLSACTALKNLELGK 210
RQ + P T+V LSAC + L+LG+
Sbjct: 206 PVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGALDLGR 265
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH Y ++ I+ NAL+DMY K G + A +F E+ +K+ WT+M+S G
Sbjct: 266 VIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTMISCCTVQG 325
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
+K A+ LF++M + P+ V++L+
Sbjct: 326 DGKK-------------------------------ALELFQDMLRAGVVPNSVTFVSVLS 354
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELR-EKD 386
C+ G +E+G + + + +D ++ +I++ + GL+E+A + ++ E D
Sbjct: 355 ACSHSGLIEEGIELFDRMRQ-LYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPD 413
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
W S++ + G N+ E+ + I DD ++
Sbjct: 414 IVIWRSLLSACLVRGN-NRLAEIAGKEIVKREPGDDGVYV 452
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 135/291 (46%), Gaps = 17/291 (5%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A F + ++A+ LI + ++L LF ++ G P + T V A
Sbjct: 198 ALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACAD 257
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+G + G +HGY K + V N++MDMY G I +F E+ KD +W
Sbjct: 258 IGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTM 317
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
IS + A+++F+ M + ++P+ T VS LSAC+ +E G E+ + Q
Sbjct: 318 ISCCTVQGDGKKALELFQDMLRA-GVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLY 376
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEKA--- 274
+ P++ + ++D+ + G L EA L +M +++ W S++S + G A
Sbjct: 377 KIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNRLAEIA 436
Query: 275 -RDLFDRSPVRD---IVLWTAMINGYVQFNRFDEAVALFREMQIIRL--KP 319
+++ R P D ++LW N Y N++ EA + ++M +++ KP
Sbjct: 437 GKEIVKREPGDDGVYVLLW----NMYASSNKWREAREMRQQMLSLKIFKKP 483
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/668 (34%), Positives = 366/668 (54%), Gaps = 86/668 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ + I G+ + E L +VF + + G+L+ KIF I + + +NLL+ +A
Sbjct: 389 KRVHSVIISNGISID-EALGAKLVF-MYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYA 446
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G+FR+S+ LF K+++ GV + +T+ V K LG+VK+ ++VHGYV+K G +T
Sbjct: 447 KIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTA 506
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NS++ Y G + + LFDE+ + DVVSWN I+G V + +++F +M
Sbjct: 507 VVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI-L 565
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-----INQELEFTPIMGNALLDMYCKCGC 239
+ D T+VS L A + NL LG+ +H + ++E+ F+ N LLDMY KCG
Sbjct: 566 GVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFS----NTLLDMYSKCGN 621
Query: 240 LSEARE-------------------------------LFDEMPNKNV------------- 255
L+ A E LFDEM +K V
Sbjct: 622 LNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 681
Query: 256 -ICWTSMVSG-------------------------YVNCGQLEKARDLFDRSPVRDIVLW 289
C +S+ G Y CG +E+AR +F + PV+DIV W
Sbjct: 682 CACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSW 741
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
MI GY Q + +EA+ LF +MQ + KPD + +L CA L AL++G+ IHG+I
Sbjct: 742 NTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILR 800
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
D VA AL++MYAKCGL+ A +F + +KD SWT +I G M+G N+A+
Sbjct: 801 RGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAIST 860
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
F++M G +PD+ +F +L+ACSH GL++EG +FFN+M ++PKLEHY C++DLL
Sbjct: 861 FNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLA 920
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
R G L +A + I +P + + I +G LLS CRI+ +V + EK+A + ++E ++ +
Sbjct: 921 RMGNLSKAYKFIESMPIKPDTTI---WGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRY 977
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+ +LAN+YA A +WE+V +R++M++ G ++ PGCS IE+ G + F+ G+ H + K I
Sbjct: 978 YVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRI 1037
Query: 590 YSMLDRMA 597
+L ++
Sbjct: 1038 DVLLRKLT 1045
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 206/433 (47%), Gaps = 42/433 (9%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLR--ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
N I F + G R ++ L +K + E G++ +Y V + ++ G++VH +
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLN----SYCSVLQLCAEKKSLEDGKRVHSVI 395
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
+ G+ D + ++ MY G + +K+FD++ + V WN+ +S + K F ++V
Sbjct: 396 ISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESV 455
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLD 232
+F++M Q ++ + T L AL ++ K +H Y+ +L F + N+L+
Sbjct: 456 SLFKKM-QKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYV-LKLGFGSNTAVVNSLIA 513
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
Y K G + A LFDE+ +V+ W SM++G V
Sbjct: 514 AYFKFGGVESAHNLFDELSEPDVVSWNSMINGCV-------------------------- 547
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
+NG+ + +F +M I+ ++ D LV++L A +G L G+ +HG+ +
Sbjct: 548 VNGFS-----GNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACF 602
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
+ + V + L++MY+KCG + A E+F ++ + SWTS I G + A+ LF +
Sbjct: 603 SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDE 662
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M S G +PD T ++ AC+ +D+GR + + + + L LI++ + G
Sbjct: 663 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYAKCG 721
Query: 473 LLDEAEELIRKIP 485
++EA + KIP
Sbjct: 722 SVEEARLVFSKIP 734
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/664 (33%), Positives = 347/664 (52%), Gaps = 77/664 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K I + I + G + + N L+ + G+L A ++F ++ L+++N +I +A
Sbjct: 350 KLIHSHISEDGHSSDVQIGNALISM--YARCGDLPKARELFYTMPKRDLISWNAIIAGYA 407
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
++ +++ L+ +++ GV P T+ + A G+ +H ++++G++ + +
Sbjct: 408 RREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGH 467
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ N++M+MY G + + +F+ +DV+SWN I+GH + +E A +F+ M Q
Sbjct: 468 LANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM-QNE 526
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEA 243
L PD T S LS C + LELGK+IH I + L+ +GNAL++MY +CG L +A
Sbjct: 527 ELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDA 586
Query: 244 R-------------------------------ELFDEMPN-------------------- 252
R ELF +M N
Sbjct: 587 RNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSS 646
Query: 253 ------KNVICW-------------TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
K VI + +++S Y G + AR++FD+ P RDIV W +I
Sbjct: 647 ACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKII 706
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY Q AV +MQ + P+KF V+LL C+ ALE+GK +H I + ++
Sbjct: 707 AGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQ 766
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
D V ALI MYAKCG +A E+F + EK+ +W ++I A +G +KAL F+ M
Sbjct: 767 GDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCM 826
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G KPD TF +LSAC+H GLV EG + F++M Y + P +EHYGCL+ LLGRA
Sbjct: 827 EKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARR 886
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
EAE LI ++P + + + LL ACRI+GN+ + E A K+ +++ + + LL
Sbjct: 887 FQEAETLINQMPFPPDAAV---WETLLGACRIHGNIALAEHAANNALKLNARNPAVYILL 943
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+N+YA+A RW+DV +R+ M+ G+RK PG S IE++ IIHEF+ D SH E EIY+ L
Sbjct: 944 SNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAEL 1003
Query: 594 DRMA 597
R++
Sbjct: 1004 KRLS 1007
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 255/515 (49%), Gaps = 45/515 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K+I +QI + G Q++P N L+ + G+L A ++F I +++YN ++ +A
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSM--YGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+K ++ L LF ++ G+SPD TY + A + +G+++H V+ GL D
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIR 265
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V +++ M G + + K+ F D+DVV +N I+ + +A + + RMR
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD- 324
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEA 243
+ + T +S L+AC+ K LE GK IH +I+++ + + +GNAL+ MY +C
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC------ 378
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
G L KAR+LF P RD++ W A+I GY +
Sbjct: 379 -------------------------GDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ L+++MQ +KP + + LL+ CA A GK IH I + I + +A AL+
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MY +CG + +A +F + +D SW S+I G A +G A +LF +M + +PD+I
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF VLS C + ++ G++ +TE +Q + LI++ R G L +A +
Sbjct: 534 TFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
+ + + V + A++ C D GE + A+
Sbjct: 593 LQHRD----VMSWTAMIGGC-----ADQGEDMKAI 618
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/590 (24%), Positives = 273/590 (46%), Gaps = 66/590 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ + K+I AQ+ + + P+ ++ + ++L A ++F + ++++N LI
Sbjct: 43 LPEAKRIHAQMVEAWV--GPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLI 100
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A++G +K+ LF +++ G P+ TY + A E++ G+K+H ++K G +
Sbjct: 101 SCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ 160
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V NS++ MYG G + +++F + +DVVS+N + + + ++ + +F +M
Sbjct: 161 RDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGC 239
+ PD+ T ++ L A T L+ GK IH+ +E L +G AL+ M +CG
Sbjct: 221 SSE-GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGD 279
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A++ F ++ D+V++ A+I Q
Sbjct: 280 VDSAKQAFKGTADR-------------------------------DVVVYNALIAALAQH 308
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
EA + M+ + ++ +++L C+ ALE GK IH +I+E+ + D +
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI MYA+CG + KA E+FY + ++D SW +II G A +A+ L+ QM S G K
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 420 PDDITFIGVLSACSHGGLVDEGR---------------RFFNTMTEVY-------QIQPK 457
P +TF+ +LSAC++ +G+ N + +Y + Q
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488
Query: 458 LE--------HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
E + +I + G + A +L +++ NE E + ++LS C+ +
Sbjct: 489 FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEAL 548
Query: 510 DMGEKL-AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
++G+++ + E D + L N+Y +D NV ++ V
Sbjct: 549 ELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDV 598
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 10/291 (3%)
Query: 229 ALLDMYCKCGCLSEARELFDEMP----NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
ALL + L EA+ + +M ++ +++ YV C + A +F P R
Sbjct: 32 ALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRR 91
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
D++ W ++I+ Y Q +A LF EMQ P+K +++LT C LE GK IH
Sbjct: 92 DVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIH 151
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
I + D V +L+ MY KCG + +A ++F + +D S+ +++ A +
Sbjct: 152 SQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVK 211
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+ L LF QM S G PD +T+I +L A + ++DEG+R E + + L
Sbjct: 212 ECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE-EGLNSDIRVGTAL 270
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG-NVDMGEK 514
+ + R G +D A++ + + + V +Y AL++A +G NV+ E+
Sbjct: 271 VTMCVRCGDVDSAKQAFKGTADRD----VVVYNALIAALAQHGHNVEAFEQ 317
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
++ VALL C + L + K IH + E + D ++ LI MY KC + A ++F
Sbjct: 26 ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
E+ +D SW S+I A G KA +LF +M + G P+ IT+I +L+AC ++
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 440 EGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
G++ + + + YQ P++++ L+ + G+ G L A ++ I
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGI 189
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/668 (32%), Positives = 348/668 (52%), Gaps = 79/668 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L+ I IF+ GL Q KL+ +FC +G++ A ++F I + Y +
Sbjct: 50 LKELRHILPLIFKNGLYQEHLFQTKLVSLFC---RYGSVDEAARVFEPIDKKLNVLYYTM 106
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+K FAK K+L F ++R+ V P + + ++ K G E++ G+++HG +VK+G
Sbjct: 107 LKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D + + +MY ++ +K+FD MP++D+VSWN ++G+ + A+++
Sbjct: 167 SLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNL 226
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY------------------------ 215
M + NL P T+VS L A +AL+ + +GKEIH Y
Sbjct: 227 MCEE-NLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCG 285
Query: 216 --------INQELEFTPIMGNALLDMYCKCGCLSEARELFDEM------P---------- 251
+ LE + N+++D Y + EA +F +M P
Sbjct: 286 SLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALH 345
Query: 252 -----------------------NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
++NV S++S Y C +++ A +F + R IV
Sbjct: 346 ACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVS 405
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W AMI G+ Q R EA+ F +MQ +KPD F V+++T A+L KWIHG +
Sbjct: 406 WNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
N + + V TAL++MYAKCG I A IF + E+ +W ++I G +G ALE
Sbjct: 466 RNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALE 525
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +M G +P+ +TF+ V+SACSH GLV+ G + F+ M E Y I+P ++HYG ++DLL
Sbjct: 526 LFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLL 585
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG L+EA + I ++P + V +YGA+L AC+I+ NV+ EK+A L ++ +D
Sbjct: 586 GRAGRLNEAWDFIMQMPVKP---AVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGG 642
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+H LLANIY +A+ WE V VR M G+RK PGCS +EI +H F G +H K+
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKK 702
Query: 589 IYSMLDRM 596
IY+ L+++
Sbjct: 703 IYAFLEKL 710
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 236 KCGCLSEAREL----FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
+C L E R + F + + T +VS + G +++A +F+ + VL+
Sbjct: 46 RCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYT 105
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
M+ G+ + + D+A+ F M+ ++P + LL C L GK IHG + ++
Sbjct: 106 MLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
++D T L MYAKC + +A ++F + E+D SW +I+ G + NG ALE+ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVN 225
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
M KP IT + VL A S L+ G+
Sbjct: 226 LMCEENLKPSFITIVSVLPAVSALRLIRIGK 256
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/607 (35%), Positives = 333/607 (54%), Gaps = 87/607 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTH-PSHGNLLYAEKIFGSIQ-----SPCLL 54
+ QLKQ+ QI + GL Q P TL KL+ S +L YA K F + L
Sbjct: 38 LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALF 97
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
N LI+ ++ G R+++LL+ ++ GV+P+++T+PFV + +G +VHG V
Sbjct: 98 MLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSV 157
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
VK GLE D ++ N ++ Y G + + K+F+ M +++VVSW I G+ + R ++AV
Sbjct: 158 VKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAV 217
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMY 234
+F M +M NAL+DMY
Sbjct: 218 SLFFEM-----------------------------------------LNKVMVNALVDMY 236
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KCG + A+ LFDE ++N++ + +++S Y AR R
Sbjct: 237 MKCGAIDAAKRLFDECVDRNLVLYNTILSNY--------ARQGLAR-------------- 274
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL-----GALEQGKWIHGYINE 349
EA+A+ EM +PD+ +++ ++ AQL G + G W+H YI +
Sbjct: 275 ---------EALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEK 325
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
N I D + TAL++M+A+CG + A+++F ++ E+D ++WT+ I +AM G A L
Sbjct: 326 NGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGL 385
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
F+QM+ G KPD + F+ VL+ACSHGG V++G F+ M E + I P++EHYGC++DLLG
Sbjct: 386 FNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLG 444
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
RAGLL EA +LI+ +P E N+++ +G+LL+ACR++ NV+M A + ++ + +
Sbjct: 445 RAGLLREAFDLIKSMPMEPNDVV---WGSLLAACRVHKNVEMATYAAERINELAPQRAGV 501
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
H LL+NIYASA +W DV VR ++E GVRKVPG SS+++NG+IHEF GD SH EM I
Sbjct: 502 HVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHI 561
Query: 590 YSMLDRM 596
ML M
Sbjct: 562 ALMLQEM 568
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/597 (34%), Positives = 340/597 (56%), Gaps = 15/597 (2%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A++ + + +KL+ F + G++ A +FG I + ++N L ++
Sbjct: 23 KQLHARLVLSSVVPDNFLGSKLISF--YSKSGSIRDAYNVFGKIPRKNIFSWNALFISYT 80
Query: 65 KKGSFRKSLLLFSKL---RERGVSPDNFTYPFVFKAVGWL-GEVKKGEKVHGYVVKTGLE 120
L LFS L V PD FT KA+ L ++VH ++++ GLE
Sbjct: 81 LHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLE 140
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+D +V N+++ Y ++ + +FD MP++D VSWN ++G+ + +E+ ++FR M
Sbjct: 141 YDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVM 200
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
+ P+ T VS L AC +L G E+HR++N+ +++ + NA++ +Y KCG
Sbjct: 201 LSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGI 260
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L ARELF+EMP K+ I + SM+SGY+ G + +A DLF + W A+I+G VQ
Sbjct: 261 LDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQN 320
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
NR + AV +FR MQ +P+ L ++L + L+ GK IHGY N + VA
Sbjct: 321 NRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVA 380
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TA+I+ YAKCG + A +F +++ + +WTSII A++G N AL LF +M++ G +
Sbjct: 381 TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQ 440
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD +TF VL+AC+H G +DE + FN + Y IQP +EHY C++ +L RAG L +A E
Sbjct: 441 PDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVE 500
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
I K+P E ++GALL+ + G+V++G+ + L +IE +++ + ++AN+Y+
Sbjct: 501 FISKMPLEPT---AKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQ 557
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK--EIYSMLD 594
+ RW+D +R MKE+ ++K+PG S IE +G + F HS ++ E+Y ML+
Sbjct: 558 SGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRFCX---RHSSVRTPEVYGMLE 611
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 222/521 (42%), Gaps = 115/521 (22%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
AY LI+ FR L ++L V PDNF G K+ +
Sbjct: 5 AYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFL----------------GSKLISFY 48
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
K+G SI D Y V GKI P K++ SWN + D +
Sbjct: 49 SKSG---------SIRDAYNVFGKI----------PRKNIFSWNALFISYTLHNMHTDLL 89
Query: 175 DVFRRM--RQGCNLMPDEGTVVSTLSACTAL-KNLELGKEIHRYI-NQELEFTPIMGNAL 230
+F + ++ PD TV +L A +L N L KE+H +I + LE+ + NAL
Sbjct: 90 KLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNAL 149
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+ Y +C L AR +FD MP ++ + W +M++GY G E+ ++LF
Sbjct: 150 ITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELF-----------R 198
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
M++ + +KP+ V++L CAQ L G +H ++NE+
Sbjct: 199 VMLSS-------------------VEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNES 239
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+I +D + A+I +YAKCG+++ A E+F E+ EKD ++ S+I G ++G +N+A++LF
Sbjct: 240 QIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLF 299
Query: 411 SQ-------------------------------MISGGAKPDDITFIGVLSACSHGGLVD 439
+ M S G +P+ +T +L SH +
Sbjct: 300 REQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLK 359
Query: 440 EGRRFFNTMTEVYQIQPKLEH----YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
G+ Y I+ + +ID + G L A+ + +I + +
Sbjct: 360 GGKEIHG-----YAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRS----LIA 410
Query: 496 YGALLSACRIYGNVDMGEKL--AALLEKIESKDSSFHTLLA 534
+ +++SA ++G+ ++ L L I+ +F ++LA
Sbjct: 411 WTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLA 451
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/495 (40%), Positives = 296/495 (59%), Gaps = 9/495 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+++ ++H V+ G++ D V + Y ++ L PD V + +I
Sbjct: 48 LRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHA 107
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEF 222
H A+ + M G L+P T+ S+L AC L LG+ +H Y L
Sbjct: 108 HSSRGLHLAALALLSEM-LGRGLIPTSHTLSSSLPAC---HGLALGRALHAYAFKLALAG 163
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ ALL MY + G AR LFDEMP+ +V+ T+M++ Y G L+ AR+LFD P
Sbjct: 164 DSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMP 223
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+D + W AMI+GY Q R +EA+ LFR M + PD+ ++ L+ AQLG E G+W
Sbjct: 224 SKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRW 283
Query: 343 IHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H Y+ N R+ ++A V TALI+MY KCG +E A+ +F + +KD W ++I G AM+G
Sbjct: 284 LHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHG 343
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
KALE+FSQ+ S G P DITFIG+L+ACSH GLVDEG +FF +M E Y I PK+EHY
Sbjct: 344 DSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHY 403
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++DLLGRAGL++EA L++ + + + ++ +LL+ACR++ N+ +G+++A L
Sbjct: 404 GCMVDLLGRAGLIEEAFHLVQSMTIAPDTV---MWVSLLAACRLHKNMALGQQIADYLVA 460
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+S + LL+NIYA+ WE+V VR MK G++K PGCS+IE+ ++EF+ GD
Sbjct: 461 GGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDM 520
Query: 582 SHSEMKEIYSMLDRM 596
SH EIY+ML++M
Sbjct: 521 SHPRTDEIYAMLEKM 535
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 7/250 (2%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P + + + G L A ++F + S + +N +I + + G ++L LF
Sbjct: 193 DPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRW 252
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT-GLEFDTYVCNSIMDMYGVLG 137
+ GV PD AV LG + G +H YV + ++ + V +++DMY G
Sbjct: 253 MLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCG 312
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVST 196
+ + +F+ + DKD+V WN I+G+ A+++F ++R QG L P + T +
Sbjct: 313 SLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQG--LWPTDITFIGL 370
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NK 253
L+AC+ ++ G + + + +E P + + ++D+ + G + EA L M
Sbjct: 371 LNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAP 430
Query: 254 NVICWTSMVS 263
+ + W S+++
Sbjct: 431 DTVMWVSLLA 440
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/495 (40%), Positives = 296/495 (59%), Gaps = 9/495 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+++ ++H V+ G++ D V + Y ++ L PD V + +I
Sbjct: 47 LRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHA 106
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEF 222
H A+ + M G L+P T+ S+L AC L LG+ +H Y L
Sbjct: 107 HSSRGLHLAALALLSEM-LGRGLIPTSHTLSSSLPAC---HGLALGRALHAYAFKLALAG 162
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ ALL MY + G AR LFDEMP+ +V+ T+M++ Y G L+ AR+LFD P
Sbjct: 163 DSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMP 222
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+D + W AMI+GY Q R +EA+ LFR M + PD+ ++ L+ AQLG E G+W
Sbjct: 223 SKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRW 282
Query: 343 IHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H Y+ N R+ ++A V TALI+MY KCG +E A+ +F + +KD W ++I G AM+G
Sbjct: 283 LHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHG 342
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
KALE+FSQ+ S G P DITFIG+L+ACSH GLVDEG +FF +M E Y I PK+EHY
Sbjct: 343 DSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHY 402
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++DLLGRAGL++EA L++ + + + ++ +LL+ACR++ N+ +G+++A L
Sbjct: 403 GCMVDLLGRAGLIEEAFHLVQSMTIAPDTV---MWVSLLAACRLHKNMALGQQIADYLVA 459
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+S + LL+NIYA+ WE+V VR MK G++K PGCS+IE+ ++EF+ GD
Sbjct: 460 GGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDM 519
Query: 582 SHSEMKEIYSMLDRM 596
SH EIY+ML++M
Sbjct: 520 SHPRTDEIYAMLEKM 534
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 7/250 (2%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P + + + G L A ++F + S + +N +I + + G ++L LF
Sbjct: 192 DPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRW 251
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT-GLEFDTYVCNSIMDMYGVLG 137
+ GV PD AV LG + G +H YV + ++ + V +++DMY G
Sbjct: 252 MLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCG 311
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVST 196
+ + +F+ + DKD+V WN I+G+ A+++F ++R QG L P + T +
Sbjct: 312 SLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQG--LWPTDITFIGL 369
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NK 253
L+AC+ ++ G + + + +E P + + ++D+ + G + EA L M
Sbjct: 370 LNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAP 429
Query: 254 NVICWTSMVS 263
+ + W S+++
Sbjct: 430 DTVMWVSLLA 439
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/587 (36%), Positives = 337/587 (57%), Gaps = 24/587 (4%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIF--------GSIQSPCLL 54
+ +I A++ G +NP ++++ L +A +F G + P L
Sbjct: 30 VNKIHARLITNGFIKNPNLTTRIVLDFADSRRSYLAEFARFVFHEYHVCSNGDFEDPFL- 88
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
+N +IK+ + RK+LLLF + E GVS D F+ V KA LG VK+G ++HG++
Sbjct: 89 -WNAVIKSHSHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKACSRLGFVKEGMQIHGFL 147
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
KTG+ D Y+ N ++ +Y G + +++FD MP +D VS+N I G+VKC E A
Sbjct: 148 RKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESAR 207
Query: 175 DVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLD 232
+F +LMP E ++S + G + + + E+ E I N+L+D
Sbjct: 208 GLF-------DLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDLISWNSLID 260
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
Y K G + +A+ LF++MP ++V+ W +MV GY G + +A+ LFDR P+RD+V + +M
Sbjct: 261 GYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSM 320
Query: 293 INGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
I GYVQ EA+ +F +M+ L PD+ LV +L+ AQLG L + IH YI +N+
Sbjct: 321 ITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNK 380
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + ALI+ Y+KCG I+K++ +F E+ K W ++I GLA++G A ++
Sbjct: 381 FRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLL 440
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
Q+ KPDDITFIGVL+ACSH GLV EG F M ++I+PKL+HYGC++D+L R+
Sbjct: 441 QIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRS 500
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G ++ A+ LI ++P E N++I + L+AC + + GE +A L + S
Sbjct: 501 GSIELAKNLIEEMPIEPNDVI---WRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFV 557
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
LL+N+YAS W++V VR MKE +RK+PGCS IE++G +HEF V
Sbjct: 558 LLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWIELDGNVHEFFV 604
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/606 (34%), Positives = 331/606 (54%), Gaps = 54/606 (8%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCT--------HPSHGNLLYAEKIFG-SIQSPC 52
L QI A + + L+ NP K + C+ + +++A ++F
Sbjct: 166 ANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDD 225
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVH 111
N +IKA+ + +S L+ LR +PD+FT+ + K+ + +G+++H
Sbjct: 226 AFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIH 285
Query: 112 GYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE 171
+VV G D Y +++DMY GK+ +KLFDEM D+ VSW I G+V+ +
Sbjct: 286 SHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMD 345
Query: 172 DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALL 231
+A +F +Q +E N ++
Sbjct: 346 NAGKLF---------------------------------------DQMIEKDSAAFNTMI 366
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
D Y K G + AR+LFDEMP ++V+ WT M+ GY + G L+ AR LFD P +++ W A
Sbjct: 367 DAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNA 426
Query: 292 MINGYVQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
MI+GY Q + EA+ LF EMQ L+PD+ +V++L A LGAL+ G W+H ++
Sbjct: 427 MISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRK 486
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
++ V TALI+MYAKCG I K+ +F + EK+ ASW ++I A+NG+ +AL LF
Sbjct: 487 KLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLF 546
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M G P++IT IGVLSAC+H GLV+EG+R+F M E + + PK+EHYGC++DLLGR
Sbjct: 547 MEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGR 605
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
AG L EAE+L+ +P E N II+ + L AC +V E++ K+E+ + +
Sbjct: 606 AGCLQEAEKLMESMPYEANGIIL---SSFLFACGYSKDVARAERVLKEAIKMEAWNDGNY 662
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
+L N+YA+ RW++ V+ M+ GV+K GCS+IE++ + EF+ GD H + + I+
Sbjct: 663 IMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIH 722
Query: 591 SMLDRM 596
S+L ++
Sbjct: 723 SVLGQL 728
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 328/567 (57%), Gaps = 49/567 (8%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L Q+ A + Q GL+Q+ + + + +H + Y+ +F + SP +N L+ +
Sbjct: 45 LHQVHAHLIQKGLEQDSFLVTQFISASNSVAH--ISYSTSVFDRVLSPSTFLWNSLVSGY 102
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
K F + L+ +++ +PD +T+P + K G++ +G +HG +++ G++ D
Sbjct: 103 CAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDEDI 162
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YV S++++YG G I +K+FD M +++VVSW I G+ +A +F
Sbjct: 163 YVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLF------ 216
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+LMP E V S NA++ Y K G + A
Sbjct: 217 -DLMP-ERNVAS-------------------------------WNAIIGGYMKMGDVKSA 243
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+ FDEMP KNV+ +T+M+ GY G + AR+LF ++P RDI+ W+A+I+GY Q + +
Sbjct: 244 EKAFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPN 303
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD---AVVAT 360
EAV F EM +KPDKF+L +L+ C+QLG L+ KW+ Y R +VD A V
Sbjct: 304 EAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSY--ATRCSVDLRGAHVTA 361
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+M AKCG +E+A+ +F ++ ++D S+ S++ GL+++G ++A+ LF +M+ P
Sbjct: 362 ALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTP 421
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DD+ F +L+ACS GLVDEG +F M Y + P ++HY C++DLL R+G L EA EL
Sbjct: 422 DDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYEL 481
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+ +P +++ +GALL AC++Y + ++ E +A+ L +IE +++ + LL+NIYA+A
Sbjct: 482 IKSVPVQSH---AGAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAA 538
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+RW DV+ VR +M E G+RK+PGCS I
Sbjct: 539 DRWLDVSAVRNQMNERGLRKIPGCSWI 565
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 9/223 (4%)
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
F+RF + F + + + + ALL C L Q +H ++ + + D+ +
Sbjct: 8 FSRFHTTTS-FAKTTNPKSNVSLYSISALLKLCKTHIDLHQ---VHAHLIQKGLEQDSFL 63
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T I I + +F + W S++ G + + L+ +M
Sbjct: 64 VTQFISASNSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDG 123
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD TF +L C+ G + EG ++ + + L++L G+ GL+D A
Sbjct: 124 APDRYTFPSLLKVCASEGKMMEGMALHGSILRC-GVDEDIYVTTSLVNLYGKGGLIDCA- 181
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
RK+ + +E V + A++ GN+ ++L L+ +
Sbjct: 182 ---RKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPE 221
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 340/632 (53%), Gaps = 43/632 (6%)
Query: 1 MTQLKQIQAQIFQIG-LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L I A + G + + TLNKL+ + G + YA K+F P + L
Sbjct: 16 LKTLTTIHAHLLISGSIASSDLTLNKLLRL--YSKFGAVSYAHKLFDETPEPNSFLWTAL 73
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I F + + + F K+ + P NFT V KAV LG +K G+ V+G V+ G
Sbjct: 74 IHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGY 133
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
EFD V N +++++ G++ + +++FDEM ++D VSWN I+G+ R + A +F R
Sbjct: 134 EFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDR 193
Query: 180 MR-----------QGC-------------NLMP--DEGTVVSTLSACTALKNLELGKEIH 213
M QG MP D + +SA ++ NL + +
Sbjct: 194 MEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNL- 252
Query: 214 RYINQELEFTPIMG----NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
E PI N ++ CK G + A+E FD M +NV W ++ GY+ G
Sbjct: 253 ------FELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVG 306
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
++ AR +FD+ P +++V W+ MI GY + ++ L++ + +KPD+ + +++
Sbjct: 307 DVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIIS 366
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C+QLG + + + + + V T+LI+MYAKCG IE+A+++F + +KD
Sbjct: 367 ACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHC 426
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
++++I A +G A+ LFS+M KPD + F+GVL+AC+HGGLV EGRR F M
Sbjct: 427 YSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMI 486
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+ Y IQP +HY C++D+LGRAG L+EA LI +P N + +GALLSACR++ NV
Sbjct: 487 DEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATV---WGALLSACRVHLNV 543
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+ E A L +IE +S + LL NIYA A +W+D + VR ++E VRK G S IE+
Sbjct: 544 QLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIEL 603
Query: 570 NGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
+IHEF++GD SH + + I+ ML+ + K ++
Sbjct: 604 GSVIHEFVMGDKSHFDSERIFFMLELLCKDMM 635
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 155/359 (43%), Gaps = 48/359 (13%)
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
L C +LK L H I+ + + + N LL +Y K G +S A +LFDE P N
Sbjct: 10 LKQCRSLKTLTT-IHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSF 68
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
WT+++ G + + N+++ A A F +M
Sbjct: 69 LWTALIHG-------------------------------FTENNQYENAFAFFIKMHREN 97
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+ P F + ++L ++LG ++ G ++G D VV +IE++ +CG + A
Sbjct: 98 IVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSAR 157
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F E+ E+DA SW S+I G NG+++ A +LF +M + + I++ ++ G
Sbjct: 158 QMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRM----EERNVISWTSMIQGYVKAG 213
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
+ E R F M E L + ++ G L A L +P + V +
Sbjct: 214 DLLEARVLFERMPE-----KDLASWKVMVSAYMSVGNLVAARNLFELMPIHD----VGTW 264
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
++S C G +D ++ ++++ ++ + ++ + Y + +V +M E
Sbjct: 265 NLMISGCCKAGEMDAAKE---FFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPE 320
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/635 (33%), Positives = 345/635 (54%), Gaps = 42/635 (6%)
Query: 2 TQLKQIQAQIFQIGLQQNPETL-NKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+QL I +I + + E L N L + P H L Y +F + P ++ +
Sbjct: 16 SQLHAILTTSGRIAHRPSAEHLLNSLTNCLSAPRH--LRYVLSLFDRLPHPTTFLHDTAL 73
Query: 61 KA-FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+A +L+ ++R GV FT+ FVF+ +H ++T L
Sbjct: 74 RACLQASAGADHPVLILRRMRRGGVRMSAFTFHFVFRCCAAGAGAGLCRMLHAACLRTML 133
Query: 120 EFDT-YVCNSIMDMYGVLGKICNVKKLFDEMPDKD------------------------- 153
V N ++ MY LG + ++ FDE+P KD
Sbjct: 134 PSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLLV 193
Query: 154 ------VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
VVSW I+G+ + R DAV F M + PDE V+ LSAC+ LKNLE
Sbjct: 194 QAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSD-GVEPDEVAVIGALSACSKLKNLE 252
Query: 208 LGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVSGY 265
G+ +H + ++ ++ T + L+DMY KCG +++A+ +FD + + W ++ GY
Sbjct: 253 FGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGY 312
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G ++ AR LFD+ RD++ + +MI GY+ R +A+ LF +++ ++ D F +V
Sbjct: 313 CKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVV 372
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
+LLT CA LGAL QG+ +H I + + D + TAL++MY KCG +++A +F+ + E+
Sbjct: 373 SLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGER 432
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D +W+++I GLA NG ALE F QM G +P +T+I VL+ACSH L++EGR+ F
Sbjct: 433 DVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHF 492
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
N M ++++ P++EHYGC+IDLL R+GLLDEA L++ +P + N +I + ++LSACR+
Sbjct: 493 NEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVI---WASILSACRV 549
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ N+D+ A L K+ ++ + + L NIY + +W + +R M+E GV+K G S
Sbjct: 550 HKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYS 609
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
SI + G +H+F+V D SH EI +M++ +A+ L
Sbjct: 610 SITVAGQVHKFVVNDQSHPWTLEIITMMEEIARRL 644
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/418 (44%), Positives = 265/418 (63%), Gaps = 7/418 (1%)
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARE 245
+PD + L AC L L G+EIH + + + NAL+ + CG + AR
Sbjct: 7 LPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARA 66
Query: 246 LFDEMPN--KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+FD +P ++V+ W SM+SGY+ + E A +FDR P R+ V WT+MI GY Q + F
Sbjct: 67 VFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFK 126
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ LFREMQI D + +L+ C GAL QG+WIH Y N I +D ALI
Sbjct: 127 EAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALI 186
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDD 422
MY+KCG I+KALEIF+ L + D SW+++I GLAMNG+ +KAL LFSQM + +P++
Sbjct: 187 GMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNE 246
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITF+GVL AC+HGG VD+G +FN MT++Y + P +EHYGC++DLLGRA LL EAE+ IR
Sbjct: 247 ITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIR 306
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + + +I + +LL ACR +GN+++ E A +E++E + LL+N+YASA+R
Sbjct: 307 TLPIQPDVVI---WRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASR 363
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W DV VR+ M ++K PGCS +EI+G++HE V D SH EM IY + + K L
Sbjct: 364 WGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKAL 421
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 159/361 (44%), Gaps = 69/361 (19%)
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV 142
G PDN+++PFV KA L + KG ++H +K G+ D +V N+++ + G +
Sbjct: 5 GTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAA 64
Query: 143 KKLFDEMPD--KDVVSWNVSISGHVKCMRFE----------------------------- 171
+ +FD +P +DVVSWN ISG+++ R+E
Sbjct: 65 RAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDL 124
Query: 172 --DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGN 228
+A+++FR M+ G D T+ LSAC L G+ IH Y + +E N
Sbjct: 125 FKEAIELFREMQIG-GFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARN 183
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
AL+ MY KCG + +A E+F + ++ W++++SG G+
Sbjct: 184 ALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGE------------------ 225
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
D+A+ LF +M++I ++P++ + +L C G +++G + +
Sbjct: 226 -------------SDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAM 272
Query: 348 NE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINK 405
+ +T ++++ + L+ +A + L + D W S++ +G I
Sbjct: 273 TQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIEL 332
Query: 406 A 406
A
Sbjct: 333 A 333
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 8/285 (2%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F I + + +I +A+ F++++ LF +++ G + D T V A G
Sbjct: 97 ALKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGH 156
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G + +G +H Y + +E D N+++ MY G I ++F + D+ SW+
Sbjct: 157 WGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAV 216
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
ISG + A+ +F +M ++ P+E T + L AC ++ G + Q
Sbjct: 217 ISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIY 276
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE----K 273
TP + + ++D+ + L EA + +P +V+ W S++ N G +E
Sbjct: 277 NLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFA 336
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
A+ + + P R + N Y +R+ + + ++M R+K
Sbjct: 337 AKQIEELEP-RRCGARVLLSNVYASASRWGDVKRVRKDMATQRIK 380
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/482 (38%), Positives = 307/482 (63%), Gaps = 6/482 (1%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H +++ G D ++ ++ I ++F + +V + I G V
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGN 228
+ DA+ ++ RM +++PD + S L AC + L G+E+H R + L ++
Sbjct: 128 YFDAIQLYSRMLHD-SILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRL 186
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
++++Y KCG L +AR +F+EMP ++V+ T M+S Y + G +E+A +F R +D V
Sbjct: 187 RIMELYGKCGELGDARRVFEEMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVC 245
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
WTAMI+G+V+ + A+ FR MQ ++P++F +V +L+ C+QLGALE G+W+H Y+
Sbjct: 246 WTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ I ++ V ALI MY++CG I++A +F E++++D ++ ++I GL+MNGK +A+E
Sbjct: 306 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 365
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF MI +P ++TF+GVL+ACSHGGLVD G + F++MT Y ++P++EHYGC++DLL
Sbjct: 366 LFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLL 425
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GR G L+EA +LIR + + I++ G LLSAC+++ N+++GE++A +LE DS
Sbjct: 426 GRVGRLEEAYDLIRTMKMTPDHIML---GTLLSACKMHKNLELGEQVAKVLEDRGQADSG 482
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+ LL+++YAS+ +W++ VR KMKE G++K PGCSSIE+N IHEFL+GD H +
Sbjct: 483 TYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKER 542
Query: 589 IY 590
IY
Sbjct: 543 IY 544
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 216/455 (47%), Gaps = 78/455 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+ I AQ+ + G Q+P + +L+ C+ H + YA +IF +P + Y LI
Sbjct: 62 INQVLPIHAQLIRNGHSQDPFMVFELLRSCS-KCHA-IDYASRIFQYTHNPNVYLYTALI 119
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F G++ ++ L+S++ + PDN+ + KA G +++G +VH +K GL
Sbjct: 120 DGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLS 179
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPD----------------------------- 151
+ V IM++YG G++ + +++F+EMP+
Sbjct: 180 SNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVR 239
Query: 152 -KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
KD V W I G V+ A++ FR M QG N+ P+E T+V LSAC+ L LE+G+
Sbjct: 240 RKDTVCWTAMIDGFVRNEEMNRALEAFRGM-QGENVRPNEFTIVCVLSACSQLGALEIGR 298
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+H Y+ + E+E +GNAL++MY +CG + EA+ +FDEM +++VI + +M+SG G
Sbjct: 299 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 358
Query: 270 QLEKARDLFD----------------------------------RSPVRD------IVLW 289
+ +A +LF S RD I +
Sbjct: 359 KSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHY 418
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
M++ + R +EA L R M ++ PD +L LL+ C LE G+ + + E
Sbjct: 419 GCMVDLLGRVGRLEEAYDLIRTM---KMTPDHIMLGTLLSACKMHKNLELGEQV-AKVLE 474
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+R D+ L +YA G ++A ++ +++E
Sbjct: 475 DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 509
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 12/187 (6%)
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
II L + IN+ L + +Q+I G D +L +CS +D R F Y
Sbjct: 52 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ-----Y 106
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNV 509
P + Y LID +G +A +L ++ +++ I+P L ++L AC +
Sbjct: 107 THNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDS---ILPDNYLMASILKACGSQLAL 163
Query: 510 DMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
G ++ + K+ S + + +Y D V ++M E V SS
Sbjct: 164 REGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYS 223
Query: 569 INGIIHE 575
G++ E
Sbjct: 224 DQGLVEE 230
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/528 (37%), Positives = 314/528 (59%), Gaps = 40/528 (7%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK-ICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+K+H ++ TG DT++ ++ Y V + I +F + D SW I G V+
Sbjct: 44 KKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVE 103
Query: 167 CMRFEDAVDVFRRMRQ-GCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
E A++ + MRQ G L ++ T + L A + + G+ +H + + +
Sbjct: 104 AKNPEKALEFYGLMRQRGVEL--NKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDV 161
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR--------- 275
NAL+ MY KCG +++A LFDEMPN NV+ W +M++G CG E+AR
Sbjct: 162 FTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPER 221
Query: 276 ----------------------DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
LFD P RD+V W +MI+ YVQ R EA+ LF+EM
Sbjct: 222 NVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMM 281
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+ + D I+ ++L+ CAQ+GAL+ G+WIH Y+ +++ D + TAL++MYAKCG I+
Sbjct: 282 LAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCID 341
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A +F + K+ SW +++ GLA++G ALELF QM S G P+DITF+ VLSACS
Sbjct: 342 TAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACS 401
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H G V+EG + FN M + + I PK+EHYGC++D+L R GL++EA+E+IR +P E N +I
Sbjct: 402 HIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVI- 460
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+GALL+AC+++G ++GE + ++K+ S+D + LL+NI+A+ ++W +V R+ M
Sbjct: 461 --WGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMM 518
Query: 554 KEMGV-RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
K+MGV +K+PG SSIE++ ++H+F D HS+ +E+ ++++R+ L
Sbjct: 519 KQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHL 566
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 200/465 (43%), Gaps = 96/465 (20%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LK+I AQ+ G ++ K V S N+ YA +F I P ++ +I+ F
Sbjct: 43 LKKIHAQLIITGQIKDTFIATK-TVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGF 101
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ + K+L + +R+RGV + FT+ FV KA G ++G VHG +VK G +D
Sbjct: 102 VEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDV 161
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM--- 180
+ N+++ MY G I + LFDEMP+ +VV+WN I+G C E A +F M
Sbjct: 162 FTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPER 221
Query: 181 ---------------------RQGCNLMPDEGTV-------------------------- 193
R +LMP+ V
Sbjct: 222 NVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMM 281
Query: 194 -----------VSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLS 241
S LSAC + L++G+ IH Y+ + +L + AL+DMY KCGC+
Sbjct: 282 LAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCID 341
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
A +F+ MP KN+ W +M+SG G G+
Sbjct: 342 TAFGVFNTMPRKNLCSWNAMLSGLAIHGH------------------------GFA---- 373
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVAT 360
A+ LF++M+ + P+ VA+L+ C+ +G++E+G K + E IT
Sbjct: 374 ---ALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYG 430
Query: 361 ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKIN 404
++++ + GLI +A E+ + E + W +++ ++G N
Sbjct: 431 CMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTN 475
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 344/591 (58%), Gaps = 41/591 (6%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
QLKQI A++ +GLQ + + KL+ + S G++ +A ++F + P + +N +I+
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQIFPWNAIIR 92
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ F+ +LL++S ++ VSPD+FT+P + KA L ++ G VH V + G +
Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFD--EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V N ++ +Y ++ + + +F+ +P++ +VSW +S + + +A+++F +
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
MR+ ++ PD +VS L+A T L++L+ G+ IH + LE P + +L MY KC
Sbjct: 213 MRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC- 270
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
GQ+ A+ LFD+ +++LW AMI+GY +
Sbjct: 271 ------------------------------GQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
EA+ +F EM ++PD + + ++ CAQ+G+LEQ + ++ Y+ + D +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
++ALI+M+AKCG +E A +F ++D W+++I G ++G+ +A+ L+ M GG
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P+D+TF+G+L AC+H G+V EG FFN M + ++I P+ +HY C+IDLLGRAG LD+A
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+I+ +P + V ++GALLSAC+ + +V++GE A L I+ ++ + L+N+YA
Sbjct: 480 EVIKCMPVQPG---VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+A W+ V VR +MKE G+ K GCS +E+ G + F VGD SH +EI
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/593 (35%), Positives = 327/593 (55%), Gaps = 38/593 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ I + ++QN +N L+ + G L A +F ++ ++N +I +
Sbjct: 48 KQVHDCIIKSRMEQNAHVMNNLL--HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYV 105
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ ++ LF ++ GV P+ TY + KA L +K G++VH + GLE D
Sbjct: 106 EHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVR 165
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V +++ MYG G I +++FD + + D++SW V I + + ++A + +M Q
Sbjct: 166 VGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQE- 224
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
P+ T VS L+AC + L+ K +HR+ ++ LE +G AL+ MY K G
Sbjct: 225 GFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSG----- 279
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++ AR +FDR VRD+V W MI + + R
Sbjct: 280 --------------------------SIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA LF +MQ KPD + +++L CA GALE K IH + ++ + VD V TAL+
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALV 373
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MY+K G I+ A +F ++ ++ SW ++I GLA +G ALE+F +M + G KPD +
Sbjct: 374 HMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRV 433
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF+ VLSACSH GLVDEGR + MT+VY I+P + H C++DLLGRAG L EA+ I
Sbjct: 434 TFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDN 493
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+ + +E +GALL +CR YGNV++GE +A K++ K+++ + LL+NIYA A +W
Sbjct: 494 MAVDPDE---ATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKW 550
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+ V+ VR M+E G+RK PG S IE++ IH+FLV D SH E KEI D++
Sbjct: 551 DMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKV 603
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 43/292 (14%)
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
N EA+ + L D F+ V +L C + L K +H I ++R+ +A V
Sbjct: 7 NTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM 66
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
L+ +Y +CG +++A +F L +K ASW ++I G + A+ LF +M G +
Sbjct: 67 NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126
Query: 420 PDDITFIGVLSACS----------------HGGL-------------------VDEGRRF 444
P+ T++ +L AC+ HGGL ++E RR
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
F+ + + + + +I ++G EA L+ ++ E + Y ++L+AC
Sbjct: 187 FDNL-----MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACA 241
Query: 505 IYGNVDMGEKL--AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMK 554
G + +++ AL +E D T L +YA + +D V +MK
Sbjct: 242 SEGALKWVKRVHRHALDAGLEL-DVRVGTALVQMYAKSGSIDDARVVFDRMK 292
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 296/493 (60%), Gaps = 9/493 (1%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
++HG ++K G + ++++ Y L + + +FD + + V WN + +
Sbjct: 28 QIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIWNTMLRAYSN 87
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
E A+ ++ +M N +P T L AC+AL E ++IH +I +
Sbjct: 88 SNDPEAALLLYHQMLH--NSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEV 145
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
N+LL +Y G + A LF+++P ++++ W M+ GY+ G L+ A +F P +
Sbjct: 146 YATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEK 205
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+++ WT MI G+V+ EA++L ++M + +KPD L L+ CA LGALEQGKWIH
Sbjct: 206 NVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIH 265
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
YI +N I +D V+ L +MY KCG +EKAL +F +L +K +WT+II GLA++GK
Sbjct: 266 TYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAIIGGLAIHGKGR 325
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+AL+ F+QM G P+ ITF +L+ACSH GL +EG+ F +M+ VY I+P +EHYGC+
Sbjct: 326 EALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCM 385
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DL+GRAGLL EA E I +P + N I +GALL+AC+++ + ++G+++ +L +++
Sbjct: 386 VDLMGRAGLLKEAREFIESMPVKPNAAI---WGALLNACQLHKHFELGKEIGKILIELDP 442
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
S + LA+IYA+A W V VR ++K G+ PGCSSI +NG++HEF GD SH
Sbjct: 443 DHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLNGVVHEFFAGDGSHP 502
Query: 585 EMKEIYSMLDRMA 597
++EIY M + +A
Sbjct: 503 HIQEIYGMPNLLA 515
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 204/427 (47%), Gaps = 64/427 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +L QI Q+ + G +N T++ L+V NL Y +F SI SP + +N ++
Sbjct: 23 MKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIWNTML 82
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A++ +LLL+ ++ V +++T+PF+ KA L ++ +++H +++K G
Sbjct: 83 RAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFG 142
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ Y NS++ +Y + G I + LF+++P +D+VSWN+ I G++K + A +F+ M
Sbjct: 143 LEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAM 202
Query: 181 ---------------------RQGCNLM---------PDEGTVVSTLSACTALKNLELGK 210
++ +L+ PD T+ +LSAC L LE GK
Sbjct: 203 PEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGK 262
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH YI + E++ P++G L DMY KCG + +A +F ++ K V WT+++ G G
Sbjct: 263 WIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAIIGGLAIHG 322
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
K R+ D W F +MQ + P+ A+LT
Sbjct: 323 ---KGREALD---------W-------------------FTQMQKAGINPNSITFTAILT 351
Query: 330 GCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-DA 387
C+ G E+GK + ++ I ++++ + GL+++A E + K +A
Sbjct: 352 ACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNA 411
Query: 388 ASWTSII 394
A W +++
Sbjct: 412 AIWGALL 418
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/630 (34%), Positives = 339/630 (53%), Gaps = 56/630 (8%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC----LLAYNLLIKAFAKKGSFRKSL 73
+ P+ + + + H S GN A +IF +P + YN +I ++ ++
Sbjct: 77 RQPDIVARTTLIAAHSSAGNSNLAREIF--FATPLGIRDTVCYNAMITGYSHNNDGFGAI 134
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDTYVCNSIMDM 132
LF L G PDNFT+ V A+ + E K+ +++H VVK+G F T V N+++ +
Sbjct: 135 ELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSV 194
Query: 133 Y---------GVLGKICNVKKLFDEMPDKD------------------------------ 153
+ + +KLFDEM ++D
Sbjct: 195 FVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEK 254
Query: 154 -VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
VV+WN ISG+V F +A+++FR+M + DE T S LSAC GK++
Sbjct: 255 LVVAWNAMISGYVHHGFFLEALEMFRKMYL-LGIQWDEFTYTSVLSACANAGFFLHGKQV 313
Query: 213 HRYI-----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
H YI L+F+ + NAL +Y KCG + EAR++F++MP K+++ W +++SGYVN
Sbjct: 314 HAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVN 373
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G++++A+ F+ P R+++ WT MI+G Q +E++ LF M+ +P +
Sbjct: 374 AGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGA 433
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
+ CA L AL G+ +H + ALI MYAKCG++E A +F + D+
Sbjct: 434 IIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDS 493
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SW ++I L +G +ALELF M+ PD ITF+ VLS CSH GLV+EG R+F +
Sbjct: 494 VSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKS 553
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
M+ +Y I P +HY +IDLL RAG EA+++I +P E P++ ALL+ CRI+G
Sbjct: 554 MSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGP---PIWEALLAGCRIHG 610
Query: 508 NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
N+D+G + A L ++ + + LL+N+YA+ RW+DV VR+ M++ GV+K PGCS I
Sbjct: 611 NMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWI 670
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
E+ +H FLV D H E++ +Y+ L+ +
Sbjct: 671 EVENKVHVFLVDDIVHPEVQAVYNYLEELG 700
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 173/377 (45%), Gaps = 55/377 (14%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP--VRD 285
N L+D+YCK L A LFDE+ +++ T++++ + + G AR++F +P +RD
Sbjct: 54 NRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRD 113
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE-QGKWIH 344
V + AMI GY N A+ LFR++ +PD F ++L A + E Q + IH
Sbjct: 114 TVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIH 173
Query: 345 GYINENRITVDAVVATALIEMYAKCG---------LIEKALEIFYELREKDAASWTSIIC 395
+ ++ V AL+ ++ KC L+ A ++F E+ E+D SWT++I
Sbjct: 174 CAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIA 233
Query: 396 GLAMNGKIN-------------------------------KALELFSQMISGGAKPDDIT 424
G NG+++ +ALE+F +M G + D+ T
Sbjct: 234 GYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFT 293
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY----GCLIDLLGRAGLLDEAEEL 480
+ VLSAC++ G G++ + + +P L+ L L + G +DEA ++
Sbjct: 294 YTSVLSACANAGFFLHGKQVHAYILRT-EPRPSLDFSLSVNNALATLYWKCGKVDEARQV 352
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
++P ++ + + A+LS G +D + + E++ ++ T++ + A
Sbjct: 353 FNQMPVKD----LVSWNAILSGYVNAGRIDEAK---SFFEEMPERNLLTWTVMISGLAQN 405
Query: 541 NRWEDVTNVRQKMKEMG 557
E+ + +MK G
Sbjct: 406 GFGEESLKLFNRMKSEG 422
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/608 (35%), Positives = 331/608 (54%), Gaps = 38/608 (6%)
Query: 28 VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPD 87
+ H GNL A ++F I P +++ +I + G F+ ++ F ++ G+SP
Sbjct: 85 ILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPT 144
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD 147
FT+ V + + G+KVH +VVK G V NS+++MY G K +FD
Sbjct: 145 QFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFD 204
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM----------------RQG-------- 183
M KD +WN IS H++ +F+ A+ +F +M QG
Sbjct: 205 RMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALET 264
Query: 184 -------CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
+L PD+ T+ S LSAC ++L+LGK+IH +I +++ +GNAL+ MY
Sbjct: 265 FSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYA 324
Query: 236 KCGCLSEARELFD--EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
K G + A + + P+ NVI +TS++ GY G ++ AR +FD RD+V WTAMI
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMI 384
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY Q +A+ LFR M KP+ + L A+L+ + L +L+ GK +H
Sbjct: 385 VGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEV 444
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALELFSQ 412
V ALI MY++ G I+ A +IF + +D +WTS+I LA +G N+A+ELF +
Sbjct: 445 SSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEK 504
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M+ KPD IT++GVLSAC+H GLV++G+ +FN M V+ I+P HY C+IDLLGRAG
Sbjct: 505 MLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAG 564
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
LL+EA IR +P E + V +G+LLS+CR++ VD+ + A L I+ +S +
Sbjct: 565 LLEEAYNFIRNMPIEPD---VVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLA 621
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
LAN ++ +WED VR+ MK+ V+K G S ++I +H F V D H + IY M
Sbjct: 622 LANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCM 681
Query: 593 LDRMAKTL 600
+ ++ K +
Sbjct: 682 ISKIWKEI 689
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 237/547 (43%), Gaps = 101/547 (18%)
Query: 107 GEKVHGYVVKTGLEF-DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
G +H ++K GL + ++ N+++++Y G + +LFDEMP K SWN +S H
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90
Query: 166 KCMRFEDAVDVFRRMRQ------------------------------GCNLMPDEGTVVS 195
K + A VF + Q + P + T +
Sbjct: 91 KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTN 150
Query: 196 TLSACTALKNLELGKEIHRYINQ--ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
L++C A + L++GK++H ++ + + P+ N+LL+MY KCG A+ +FD M K
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPV-ANSLLNMYAKCGDSVMAKVVFDRMRLK 209
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM- 312
+ W +M+S ++ Q + A LFD+ DIV W ++I GY A+ F M
Sbjct: 210 DTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFML 269
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ LKPDKF L ++L+ CA +L+ GK IH +I + + V ALI MYAK G +
Sbjct: 270 KSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAV 329
Query: 373 E---------------------------------KALEIFYELREKDAASWTSIICGLAM 399
E A IF L+ +D +WT++I G A
Sbjct: 330 EVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQ 389
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF-------------- 445
NG I+ AL LF MI G KP++ T VLS S +D G++
Sbjct: 390 NGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSV 449
Query: 446 -NTMTEVYQIQPKLEH----------------YGCLIDLLGRAGLLDEAEELIRKIPNEN 488
N + +Y ++ + +I L + GL +EA EL K+ N
Sbjct: 450 GNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRIN 509
Query: 489 NEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES--KDSSFHTLLANIYASANRWEDV 546
+ Y +LSAC G V+ G+ L++ + + SS + + ++ A E+
Sbjct: 510 LKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEA 569
Query: 547 TNVRQKM 553
N + M
Sbjct: 570 YNFIRNM 576
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 162/357 (45%), Gaps = 48/357 (13%)
Query: 208 LGKEIH-RYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
+G+ IH R I L + + + N LL++Y K G S+A LFDEMP K W +++S +
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAH 89
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G L+ AR +FD P D V WT MI GY F AV F M + P +F
Sbjct: 90 AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFT 149
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG--------------- 370
+L CA AL+ GK +H ++ + + VA +L+ MYAKCG
Sbjct: 150 NVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK 209
Query: 371 ----------------LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
+ AL +F ++ + D SW SII G G +ALE FS M+
Sbjct: 210 DTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFML 269
Query: 415 -SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG----CLIDLLG 469
S KPD T VLSAC++ + G++ + ++ ++ G LI +
Sbjct: 270 KSSSLKPDKFTLGSVLSACANRESLKLGKQI-----HAHIVRADVDIAGAVGNALISMYA 324
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
++G ++ A ++ + +I + +LL G++D A+ + ++ +D
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIA--FTSLLDGYFKIGDIDPAR---AIFDSLKHRD 376
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 343/591 (58%), Gaps = 41/591 (6%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
QLKQI A++ +GLQ + + KL+ + S G++ +A ++F + P + +N +I+
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQIFPWNAIIR 92
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ F+ +LL++S ++ VSPD+FT+P + KA L ++ G VH V + G +
Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFD--EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V N ++ +Y ++ + + +F+ +P++ +VSW +S + + +A+++F
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSH 212
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
MR+ ++ PD +VS L+A T L++L+ G+ IH + LE P + +L MY KC
Sbjct: 213 MRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC- 270
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
GQ+ A+ LFD+ +++LW AMI+GY +
Sbjct: 271 ------------------------------GQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
EA+ +F EM ++PD + + ++ CAQ+G+LEQ + ++ Y+ + D +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
++ALI+M+AKCG +E A +F ++D W+++I G ++G+ +A+ L+ M GG
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P+D+TF+G+L AC+H G+V EG FFN M + ++I P+ +HY C+IDLLGRAG LD+A
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+I+ +P + V ++GALLSAC+ + +V++GE A L I+ ++ + L+N+YA
Sbjct: 480 EVIKCMPVQPG---VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+A W+ V VR +MKE G+ K GCS +E+ G + F VGD SH +EI
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 352/656 (53%), Gaps = 71/656 (10%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ ++ + GL + +N LM + G L+A K+F + ++N ++ A++K+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLM--NVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKR 93
Query: 67 GSFRKSLLLFSKLRER-------------------------------GVSPDNFTYPFVF 95
G + F +L +R G+ P FT V
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+V ++ G+KVH ++VK GL + V NS+++MY G K +FD M +D+
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 156 SWNVSISGHVKC-------MRFED------------------------AVDVFRRMRQGC 184
SWN I+ H++ +FE A+D+F +M +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
L PD T+ S LSAC L+ L +GK+IH +I + + I+ NAL+ MY +CG + A
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 244 RELFDEMPNKN--VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
R L ++ K+ + +T+++ GY+ G + +A+++F RD+V WTAMI GY Q
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+ EA+ LFR M +P+ + L A+L+ + L +L GK IHG ++ V+ A
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA 453
Query: 362 LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
LI MYAK G I A F +R E+D SWTS+I LA +G +ALELF M+ G +P
Sbjct: 454 LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D IT++GV SAC+H GLV++GR++F+ M +V +I P L HY C++DL GRAGLL EA+E
Sbjct: 514 DHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I K+P E + V +G+LLSACR++ N+D+G+ A L +E ++S ++ LAN+Y++
Sbjct: 574 IEKMPIEPD---VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 630
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+WE+ +R+ MK+ V+K G S IE+ +H F V D +H E EIY + ++
Sbjct: 631 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 306/489 (62%), Gaps = 9/489 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVL--GKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+++H +++ + D + I+ ++ V I + KLF +P + WN I V
Sbjct: 27 KQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPHRTTFIWNTIIRIFV 86
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
+ A+ +++ M Q +P+ T L ACT N +G H + I E
Sbjct: 87 EKNENATALSLYKNMLQ-TGFLPNNYTFSFVLRACT--DNSPVGLASHAQVIKLGWESYD 143
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+ N L+ +Y + AR+LFD ++VI WT++++GYV G +E AR+LFD+ P R
Sbjct: 144 FVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHVEFARELFDQMPER 203
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ V W+AMI GYV F EA+ LF ++Q+ L+P+ +V LT C+ LG+L+ G+WIH
Sbjct: 204 NEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLDHGRWIH 263
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
Y++ N +D V+ TAL++MYAKCG IE A +F ++ +KDA ++TS+I GLA +G+
Sbjct: 264 AYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISGLANHGQSA 323
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
A++LF +M S P+++TFI VLSACS GLVDEG R FN M+ VY I+P ++HYGC+
Sbjct: 324 DAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIEPGVQHYGCM 383
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAGLL+EA+ L+R++P E + ++ GALL++CR++G+V++G++ L +
Sbjct: 384 VDLLGRAGLLEEAKRLVREMPMEPDSYVL---GALLNSCRVHGDVELGKETVESLVERGL 440
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
H LL+N+YAS+N+W+ V VR++M V+KVPGCSSIEI+G + EF+ GD S+
Sbjct: 441 DHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPGCSSIEIDGSVSEFIAGDMSYL 500
Query: 585 EMKEIYSML 593
++++ +L
Sbjct: 501 RVEDVMLVL 509
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 189/410 (46%), Gaps = 72/410 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M+Q+KQ+ + + + +P K++ S+ ++ +A K+F S+ +N +I
Sbjct: 23 MSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPHRTTFIWNTII 82
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ F +K +L L+ + + G P+N+T+ FV +A V G H V+K G E
Sbjct: 83 RIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPV--GLASHAQVIKLGWE 140
Query: 121 FDTYVCNSIMDMYGVL-------------------------------GKICNVKKLFDEM 149
+V N ++ +Y G + ++LFD+M
Sbjct: 141 SYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHVEFARELFDQM 200
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P+++ VSW+ I+G+V F +A+++F + Q L P+ +V L+AC+ L +L+ G
Sbjct: 201 PERNEVSWSAMITGYVHMGMFREALELFNDL-QLTGLRPNHAGIVGALTACSYLGSLDHG 259
Query: 210 KEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ IH Y+++ E ++G AL+DMY KCGC+ A +F++MP+K+ +TS++SG N
Sbjct: 260 RWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISGLANH 319
Query: 269 GQLEKARDLFDRSPVRDI----VLWTAMINGYVQFNRFDEAVALFREMQIIR-------- 316
GQ A LF R + V + +++ + DE + +F M ++
Sbjct: 320 GQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIEPGVQH 379
Query: 317 -------------------------LKPDKFILVALLTGCAQLGALEQGK 341
++PD ++L ALL C G +E GK
Sbjct: 380 YGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGK 429
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ +A ++F + ++++ +I + G FR++L LF+ L+ G+ P++
Sbjct: 188 GHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGAL 247
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +LG + G +H YV + G E D + +++DMY G I +F++MPDKD
Sbjct: 248 TACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAF 307
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
++ ISG + DA+ +F RM Q ++P+E T + LSAC+ + ++ G I
Sbjct: 308 AFTSLISGLANHGQSADAIQLFGRM-QSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNC 366
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK------NVICWTSMVSGYVN 267
++ P + + ++D+ + G L EA+ L EMP + + + V G V
Sbjct: 367 MSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVE 426
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
G+ E L +R V + N Y N++D V + +EM ++K
Sbjct: 427 LGK-ETVESLVERGLDHGGV-HVLLSNMYASSNQWDWVVKVRKEMGAKKVK 475
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/606 (34%), Positives = 342/606 (56%), Gaps = 22/606 (3%)
Query: 6 QIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
Q+ AQ+ G+ ++L+ V+C G + A ++F + + ++ +++ +
Sbjct: 31 QVHAQLVVNGVDVCEFLGSRLLEVYC---QTGCVEDARRMFDKMSERNVFSWTAIMEMYC 87
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G + +++ LF + GV PD+F +P VFKA L + G+ V+ Y++ G E ++
Sbjct: 88 GLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSC 147
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V SI+DM+ G++ ++ F+E+ KDV WN+ +SG+ F+ A++VFR+M
Sbjct: 148 VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLE- 206
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSE 242
+ P+ T+ S +SACT L L G+EIH Y +EL+ ++GN+L+D Y KC +
Sbjct: 207 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 266
Query: 243 ARELFDEMPNKNVICWTSM--VSGYVNCGQLEKARDLFDRSPV----------RDIVLWT 290
AR F + +++ W +M V+G+ G + A + F R + RD+V+W
Sbjct: 267 ARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWN 326
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
++I+ Q R A+ L REM + ++ + +V+ L C++L AL QGK IH +I
Sbjct: 327 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 386
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ + +LI+MY +CG I+K+ IF + ++D SW +I M+G A+ LF
Sbjct: 387 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 446
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
Q + G KP+ ITF +LSACSH GL++EG ++F M Y + P +E Y C++DLL R
Sbjct: 447 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 506
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
AG +E E I K+P E N ++G+LL ACRI+ N D+ E A L ++E + S +
Sbjct: 507 AGQFNETLEFIEKMPFEPN---AAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNY 563
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
L+ANIY++A RWED +R MKE GV K PGCS IE+ +H F+VGD SH M++I
Sbjct: 564 VLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQIS 623
Query: 591 SMLDRM 596
+ ++ +
Sbjct: 624 AKMESL 629
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 201/461 (43%), Gaps = 93/461 (20%)
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
Y + + L ++ G +VH +V G++ ++ + ++++Y G + + +++FD+M
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+++V SW + + +E+ + +F M + PD AC+ LKN +GK
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE-GVRPDHFVFPKVFKACSELKNYRVGK 131
Query: 211 EIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+++ Y ++ E + ++LDM+ KCG + AR F+E+ K+V W MVSGY + G
Sbjct: 132 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 191
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
+ F +A+ +FR+M + +KP+ + + ++
Sbjct: 192 E-------------------------------FKKALNVFRKMVLEGVKPNSITIASAVS 220
Query: 330 GCAQLGALEQGKWIHGY-INENRITVDAVVATALIEMYAKC----------GLIEK---- 374
C L L G+ IHGY I + D +V +L++ YAKC G+I++
Sbjct: 221 ACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLV 280
Query: 375 -----------------------------ALEIFYELREKDAASWTSIICGLAMNGKINK 405
A +F EL +D W SII A +G+
Sbjct: 281 SWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVN 340
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC-- 463
AL+L +M + + +T + L ACS + +G+ E++Q + C
Sbjct: 341 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGK-------EIHQFIIRCGLDTCNF 393
Query: 464 ----LIDLLGRAGLLDEAEELIRKIPNEN---NEIIVPLYG 497
LID+ GR G + ++ + +P + +++ +YG
Sbjct: 394 ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYG 434
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 319 PDKFILV--ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
PD+ I + ++L C +L L G +H + N + V + + L+E+Y + G +E A
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65
Query: 377 EIFYELREKDAASWTSII---CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+F ++ E++ SWT+I+ CGL G + ++LF M++ G +PD F V ACS
Sbjct: 66 RMFDKMSERNVFSWTAIMEMYCGL---GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACS 122
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
G+ ++ M + + G ++D+ + G +D A +I
Sbjct: 123 ELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 172
>gi|354805159|gb|AER41579.1| CRR4 [Oryza brachyantha]
Length = 626
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/604 (34%), Positives = 330/604 (54%), Gaps = 27/604 (4%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMV--FCTH-PSHGNLLYAEKIFGSIQSPCLLAYNLL 59
L+Q A++ GL +P L L+ F H P H + + +++N L
Sbjct: 17 HLRQAHARLVAAGLSASPRLLPALVAAAFSAHSPRHASAALRAAGPAASS----VSHNTL 72
Query: 60 IKAFAKKGSFRK----SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
I+ A R +L ++ + GV P+ FT+ F+ +A LG + VHG +V
Sbjct: 73 IERLAGARGHRPVPADALAAYTAMLAAGVPPNGFTFTFLLRACALLGFPRPCRCVHGQIV 132
Query: 116 KTGLEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+ G + +V N+++D+Y G G++ +++FDEM D+DVVSWN I ++ +
Sbjct: 133 RWGFGSEVFVQNTLLDVYYRCGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMSSGDYTG 192
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD 232
A+++F M E VVS + + ++ I N ++
Sbjct: 193 AMELFEAM--------PERNVVSWNTLVAGFARVGDMVTAQTVFDRMPSRNAISWNLMIS 244
Query: 233 MYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
Y G + AR +FD M K +V+ WT+MVS Y G L+ A++LFD P++++V W A
Sbjct: 245 GYASSGDVEAARSMFDRMDQKKDVVSWTAMVSAYAKIGDLDTAKELFDHMPLKNLVSWNA 304
Query: 292 MINGYVQFNRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
MI GY +R+ EA+ F+ M + R +PD+ LV++++ CAQLG++E WI +I ++
Sbjct: 305 MITGYNHNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIRKS 364
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ + + ALI+M+AKCG + +A IFYE++ + +WT++I G A NG +AL ++
Sbjct: 365 NVHLTIALGNALIDMFAKCGDVGRAQSIFYEMKTRCIITWTTMISGFAFNGLCREALLVY 424
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+ M G + DD+ FI L+AC HGGL+ EG FN M E Y IQP++EHYGC++DLLGR
Sbjct: 425 NNMCREGVELDDMVFIAALAACVHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGR 484
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
AG L EA I +P E + +I + LLS+C +GN + + ++ + ++E +SS+
Sbjct: 485 AGNLQEAVLFIESMPLEPSVVI---WATLLSSCVAHGNAEFIDYVSKKITELEPFNSSYQ 541
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
L++N A RW+ V R M+ G+ KVPG SSI++ +HEFL D H KEIY
Sbjct: 542 VLVSNSSALEGRWDGVIGARTIMRNWGIEKVPGSSSIQVGSEVHEFLAKDTMHERRKEIY 601
Query: 591 SMLD 594
+D
Sbjct: 602 ETVD 605
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/507 (37%), Positives = 309/507 (60%), Gaps = 13/507 (2%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+VHG+VV+ + +Y+ I+ + ++ + ++F ++ D ++ N I + +
Sbjct: 32 RVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNH 91
Query: 169 RFEDAVDVFRRMRQGCNLMPDEG-------TVVSTLSACTALKNLELGKEIHRYINQE-L 220
+ DAV V+ RM + C P +G T L AC LELGK++H ++ +
Sbjct: 92 QHRDAVAVYIRMLR-CPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGC 150
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ + I+ N+L++MY + G L+ A ++FDEM ++V+ W ++S + GQ+ KA LF+
Sbjct: 151 DSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNS 210
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P + IV WTAM++GY + AV FR MQ +PD +VA+L CAQLGALE G
Sbjct: 211 MPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELG 270
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+WI+ Y + + + AL+EMYAKCG I++AL++F + +KD SW+++I GLA +
Sbjct: 271 RWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAH 330
Query: 401 GKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
G+ ++A+ LF++M G +P+ ITF+G+LSACS+ GLVDEG F+ M +VY ++P +E
Sbjct: 331 GRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVE 390
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGC++DLLGR+G + A +L+R +P + ++G+LLSACR +G+VD A L
Sbjct: 391 HYGCVVDLLGRSGQIRRALDLVRDMPVPAD---AKVWGSLLSACRSHGDVDTAVLAAERL 447
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E D +LAN+YA+A RW DV + R+ ++ +RK PGCS IE+ ++ EF+ G
Sbjct: 448 VELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAG 507
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDSKQN 606
+ SE+ + +LD +A L D +++
Sbjct: 508 EGLSSELGGLAGVLDILASHLADDEED 534
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 222/462 (48%), Gaps = 78/462 (16%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L ++ + ++ + Q+ +++ C +H + +A ++F ++ P L +N +IKA+
Sbjct: 30 LLRVHGHVVRLRISQSSYLATQIVHLCN--AHRRVTHAARVFAQVRDPNLHLHNAMIKAY 87
Query: 64 AKKGSFRKSLLLFSKLRERGVSP-------DNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
A+ R ++ ++ ++ SP D FTYPF+ KA G ++ G++VH +VV+
Sbjct: 88 AQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVR 147
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR----- 169
+G + V NS+++MY G + K+FDEM ++DVVSWN+ IS H + MR
Sbjct: 148 SGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATAL 207
Query: 170 ------------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
+ AVD FR M Q PD+ ++V+ L AC L
Sbjct: 208 FNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSM-QTEGFEPDDVSIVAVLPACAQLGA 266
Query: 206 LELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
LELG+ I+ Y + T + NAL++MY KCGC+ +A +LFD M +K+VI W++++ G
Sbjct: 267 LELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGG 326
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFI 323
G R EAV LF EM+ +++P+
Sbjct: 327 LAAHG-------------------------------RAHEAVWLFTEMEKEGKVRPNVIT 355
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYEL 382
V LL+ C+ G +++G +N+ V ++++ + G I +AL++ ++
Sbjct: 356 FVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDM 415
Query: 383 R-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
DA W S++ +G ++ A+ +++ +PDD+
Sbjct: 416 PVPADAKVWGSLLSACRSHGDVDTAVLAAERLVE--LEPDDV 455
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 308/527 (58%), Gaps = 38/527 (7%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++H ++KT L+ + +V ++ + + +FDE+P D WN I ++
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH------------ 213
++++ +F +MR + D ++ + AC LK+ G+++H
Sbjct: 81 NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDL 140
Query: 214 -------------------RYINQELEFTPIMG-NALLDMYCKCGCLSEARELFDEMPNK 253
R I E+ ++ N LL Y + G ++ A +LFD MP +
Sbjct: 141 FVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPER 200
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+++ W +M+ G+ + G + A+ LFDR+ RD++ W++MI Y + + +EA+ LF EMQ
Sbjct: 201 DLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQ 260
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+ + PDK +V++L+ C +GAL GK IH I NRI +D + T+L++MYAKCG I+
Sbjct: 261 LANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDID 320
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+L +F + +D +W+++I GLA +G AL+ FS+MIS KP+D+TFIGVLSACS
Sbjct: 321 NSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACS 380
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H GLVDEG +F +M++VY + PK+EHYGC++D+LGRAG L EA ELI+ +P + I+
Sbjct: 381 HIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIV- 439
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+ ALL ACRIY NV++ E+ L ++E + LL+NIY+ A W+ V NVR+ M
Sbjct: 440 --WRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMM 497
Query: 554 KEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
K + ++KVPG SSIE++ +HEF+ GD SH E K+I ML + L
Sbjct: 498 KNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARL 544
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 204/464 (43%), Gaps = 105/464 (22%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q+ QI A I + L N L KL+ C+ S +LLYA +F I SP +N
Sbjct: 16 LNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACS--SANDLLYARSVFDEIPSPDTFIWN 73
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSP-DNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
+I+A+ + ++S+ LF ++R + P D+++ V +A G L + G+K+H V+K
Sbjct: 74 TMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLK 133
Query: 117 TGLEFDTYVCNSIMDMYGVLGKI-----------------CNV--------------KKL 145
GL D +V ++++MY G I NV L
Sbjct: 134 IGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDL 193
Query: 146 FDEMPDKDVVSWNVSISGH-------------------------------VKCMRFEDAV 174
FD MP++D+VSWN I GH K + +A+
Sbjct: 194 FDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEAL 253
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDM 233
+F M Q N++PD+ T+VS LSAC + L +GK IH I + +E +G +L+DM
Sbjct: 254 RLFHEM-QLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDM 312
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG + + +F+ M N++V W++M+ G N G E A D F + DI
Sbjct: 313 YAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDI------- 365
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
KP+ + +L+ C+ +G +++G W +
Sbjct: 366 ------------------------KPNDVTFIGVLSACSHIGLVDEG-WTYFTSMSKVYD 400
Query: 354 VDAVVAT--ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSII 394
V + ++++ + G +++A+E+ + DA W +++
Sbjct: 401 VSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALL 444
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 148/294 (50%), Gaps = 9/294 (3%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H S G++ A+K+F L++++ +I A+AK ++L LF +++ V PD T
Sbjct: 212 HASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTM 271
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V A G +G + G+ +H + + +E D + S++DMY G I N ++F+ M +
Sbjct: 272 VSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNN 331
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+DV +W+ I G E A+D F +M ++ P++ T + LSAC+ + ++ G
Sbjct: 332 RDVFAWSAMIMGLANHGFGELALDHFSKMISE-DIKPNDVTFIGVLSACSHIGLVDEGWT 390
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG---Y 265
+++ + +P + + ++D+ + G L EA EL MP + I W +++ Y
Sbjct: 391 YFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIY 450
Query: 266 VNCGQLEKAR-DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
N E+A +L + P D + + N Y Q +D+ V + R M+ I ++
Sbjct: 451 KNVEIAEEATVNLLELEPHVD-GNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQ 503
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/507 (37%), Positives = 309/507 (60%), Gaps = 13/507 (2%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+VHG+VV+ + +Y+ I+ + ++ + ++F ++ D ++ N I + +
Sbjct: 32 RVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNH 91
Query: 169 RFEDAVDVFRRMRQGCNLMPDEG-------TVVSTLSACTALKNLELGKEIHRYINQE-L 220
+ DAV V+ RM + C P +G T L AC LELGK++H ++ +
Sbjct: 92 QHRDAVAVYIRMLR-CPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGC 150
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ + I+ N+L++MY + G L+ A ++FDEM ++V+ W ++S + GQ+ KA LF+
Sbjct: 151 DSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNS 210
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P + IV WTAM++GY + AV FR MQ +PD +VA+L CAQLGALE G
Sbjct: 211 MPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELG 270
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+WI+ Y + + + AL+EMYAKCG I++AL++F + +KD SW+++I GLA +
Sbjct: 271 RWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAH 330
Query: 401 GKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
G+ ++A+ LF++M G +P+ ITF+G+LSACS+ GLVDEG F+ M +VY ++P +E
Sbjct: 331 GRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVE 390
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGC++DLLGR+G + A +L+R +P + ++G+LLSACR +G+VD A L
Sbjct: 391 HYGCVVDLLGRSGQIRRALDLVRDMPVPAD---AKVWGSLLSACRSHGDVDTAVLAAERL 447
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E D +LAN+YA+A RW DV + R+ ++ +RK PGCS IE+ ++ EF+ G
Sbjct: 448 VELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAG 507
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDSKQN 606
+ SE+ + +LD +A L D +++
Sbjct: 508 EGLSSELGGLAGVLDILASHLADDEED 534
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 222/462 (48%), Gaps = 78/462 (16%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L ++ + ++ + Q+ +++ C +H + +A ++F ++ P L +N +IKA+
Sbjct: 30 LLRVHGHVVRLRISQSSYLATQIVHLCN--AHRRVTHAARVFAQVRDPNLHLHNAMIKAY 87
Query: 64 AKKGSFRKSLLLFSKLRERGVSP-------DNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
A+ R ++ ++ ++ SP D FTYPF+ KA G ++ G++VH +VV+
Sbjct: 88 AQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVR 147
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR----- 169
+G + V NS+++MY G + K+FDEM ++DVVSWN+ IS H + MR
Sbjct: 148 SGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATAL 207
Query: 170 ------------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
+ AVD FR M Q PD+ ++V+ L AC L
Sbjct: 208 FNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSM-QTEGFEPDDVSIVAVLPACAQLGA 266
Query: 206 LELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
LELG+ I+ Y + T + NAL++MY KCGC+ +A +LFD M +K+VI W++++ G
Sbjct: 267 LELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGG 326
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFI 323
G R EAV LF EM+ +++P+
Sbjct: 327 LAAHG-------------------------------RAHEAVWLFTEMEKEGKVRPNVIT 355
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYEL 382
V LL+ C+ G +++G +N+ V ++++ + G I +AL++ ++
Sbjct: 356 FVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDM 415
Query: 383 R-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
DA W S++ +G ++ A+ +++ +PDD+
Sbjct: 416 PVPADAKVWGSLLSACRSHGDVDTAVLAAERLVE--LEPDDV 455
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/496 (39%), Positives = 301/496 (60%), Gaps = 11/496 (2%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
++ ++H VV+ GL+ D V + Y G++ + L D + + +I
Sbjct: 37 ARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHA 96
Query: 164 HV-KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELE 221
H + + + + +G L+P T+ ++L AC + L LG+ +H Y L
Sbjct: 97 HSSRGLHLPGLALLSDMLSEG--LLPTAHTLSASLPAC---RGLSLGRALHAYAFKLALS 151
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ ALL MY + G + AR LFDEMP+ +V+ T+M++ Y N G L+ AR LFD
Sbjct: 152 GDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGL 211
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P +D + W AMI+GY Q + +EA+ LFR M +PD+ +V +L+ AQLG +E GK
Sbjct: 212 PRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGK 271
Query: 342 WIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
W+H Y+ +R + ++ VATAL++MY KCG +E A+ +F+ + KD W ++I G AM+
Sbjct: 272 WLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMH 331
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G KALE+F Q+ G P DITFIG+L+ACSH GLV+EGR FF +M Y I PK+EH
Sbjct: 332 GDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEH 391
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC++DLLGRAGL++EA L++ + + + ++ +LL+ACR++ N+ +G+++A L
Sbjct: 392 YGCMVDLLGRAGLIEEAFHLVQSLTITPDAV---MWVSLLAACRLHKNMALGQRIADFLV 448
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+S + LL+NIYA+ +WE+V VR MK G++K PGCS+IEI+ ++EF+ GD
Sbjct: 449 ANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGD 508
Query: 581 PSHSEMKEIYSMLDRM 596
SH EIY+MLD+M
Sbjct: 509 MSHPCTDEIYAMLDKM 524
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 142/302 (47%), Gaps = 11/302 (3%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P ++ + + + G L A ++F + + +N +I + + G ++L LF +
Sbjct: 182 DPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRR 241
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDMYGVLG 137
+ PD T V AV LG V+ G+ +H YV + ++ + V +++DMY G
Sbjct: 242 MLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCG 301
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVST 196
+ + +F + +KD+V WN I+G+ A+++F ++R QG L P + T +
Sbjct: 302 SLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQG--LWPTDITFIGL 359
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NK 253
L+AC+ +E G+ + + E P + + ++D+ + G + EA L +
Sbjct: 360 LNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITP 419
Query: 254 NVICWTSMVSG---YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
+ + W S+++ + N ++ D + + + ++ + N Y +++E VA R
Sbjct: 420 DAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEE-VARVR 478
Query: 311 EM 312
M
Sbjct: 479 SM 480
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/638 (34%), Positives = 346/638 (54%), Gaps = 87/638 (13%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L +F + + +NL+I ++ G++ +S+ LF ++ E G+ P+++T+ +
Sbjct: 199 GDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSIL 258
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
K + V++G +VHG + K G V NS++ Y V K+ +KLFDE+ D+DV+
Sbjct: 259 KCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVI 318
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQ-GCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
SWN ISG+VK + +++F +M G ++ D T+V+ AC + L LGK +H
Sbjct: 319 SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDI--DLATMVNVFVACANIGTLLLGKVLHS 376
Query: 215 Y------INQELEFTPIMGNALLDMYCKCGCLSEA-----------------------RE 245
Y +++E+ F N LLDMY KCG L+ A RE
Sbjct: 377 YSIKAATLDREVRFN----NTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVRE 432
Query: 246 --------LFDEMPNKNVI----CWTSMVSG----------------------------- 264
LFDEM ++ V+ TS+++
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS 492
Query: 265 ------YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
Y CG ++ A D+F +D++ W MI GY + + +EA+ LF EMQ K
Sbjct: 493 NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR-ESK 551
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
PD + +L CA L AL++G+ IHGY N + D V A+++MY KCGL+ A +
Sbjct: 552 PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSL 611
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
F + KD SWT +I G M+G ++A+ F+QM G +PD+++FI +L ACSH GL+
Sbjct: 612 FDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLL 671
Query: 439 DEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
DEG + FN M + QI+P LEHY C++DLL R G L +A + I+ +P + + I +GA
Sbjct: 672 DEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATI---WGA 728
Query: 499 LLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
LL CRI+ +V + EK+A + ++E +++ ++ LLANIYA A +WE+V +R+K+ + G+
Sbjct: 729 LLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGL 788
Query: 559 RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+K PGCS IEI G I+ F+ GD S + K+I +L R+
Sbjct: 789 KKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRL 826
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 181/388 (46%), Gaps = 37/388 (9%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
++ G +V + +G+ D + ++ MY G + + +FD++ + + WN+ IS
Sbjct: 166 IRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISE 225
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT 223
+ + +++++F++M + + P+ T S L A+ +E G+++H I + L F
Sbjct: 226 YSGSGNYGESINLFKQMLE-LGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICK-LGFN 283
Query: 224 P--IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ N+L+ Y + A++LFDE+ +++VI W SM+SGYV G D
Sbjct: 284 SYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNG--------LD-- 333
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
D + +F +M + + D +V + CA +G L GK
Sbjct: 334 ---------------------DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK 372
Query: 342 WIHGY-INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+H Y I + + L++MY+KCG + A+ +F + EK SWTS+I G
Sbjct: 373 VLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVRE 432
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G + A++LF +M S G PD +L+AC+ G + G+ + + E ++
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRE-NNLETNSFV 491
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L D+ + G + +A ++ + ++
Sbjct: 492 SNALTDMYAKCGSMKDAHDVFSHMKKKD 519
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 180/437 (41%), Gaps = 67/437 (15%)
Query: 158 NVSISGHVKCMRFEDAVDVFRRMRQGC---NLMPDEGTVVSTLSACTALKNLELGKEIHR 214
+V + K + F + D+ M C N D G S L C K++ G+ +
Sbjct: 115 DVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRS 174
Query: 215 YINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
I + I+G L+ MY KCG L E R +FD++ + W M+S Y G
Sbjct: 175 IIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGN--- 231
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
+ E++ LF++M + +KP+ + ++L A
Sbjct: 232 ----------------------------YGESINLFKQMLELGIKPNSYTFSSILKCFAA 263
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
+ +E+G+ +HG I + V +LI Y + A ++F EL ++D SW S+
Sbjct: 264 VARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM 323
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG----------------L 437
I G NG ++ +E+F +M+ G D T + V AC++ G
Sbjct: 324 ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAAT 383
Query: 438 VDEGRRFFNTMTEVYQI---------------QPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+D RF NT+ ++Y + + + +I R GL D A +L
Sbjct: 384 LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 443
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF-HTLLANIYASAN 541
++ + V ++L+AC I GN+ G+ + + + + +SF L ++YA
Sbjct: 444 EMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCG 503
Query: 542 RWEDVTNVRQKMKEMGV 558
+D +V MK+ V
Sbjct: 504 SMKDAHDVFSHMKKKDV 520
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/461 (40%), Positives = 287/461 (62%), Gaps = 14/461 (3%)
Query: 150 PDKDVVSWNVSISGHVKCMR-----FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
P + WN I HV+ + +F RMR + PD T L + +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFH-GVQPDFHTFPFLLQSFASPS 78
Query: 205 NLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
L LG+ +H I + L P + +L+ MY CG L AR++FDE+P ++ W S+++
Sbjct: 79 LLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIIN 138
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII---RLKPD 320
G ++ AR+LF P R+++ W+ MINGYV+ ++ EA+ALFREMQ++ ++P+
Sbjct: 139 ANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPN 198
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+F + +L C +LGALE GKW H YI++ + VD V+ TALI+MYAKCG +EKA +F
Sbjct: 199 EFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFS 258
Query: 381 EL-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
L KD +W+++I GLAM+G + + LFS+MI+ G +P+ +TF+ V AC HGGLV
Sbjct: 259 NLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVS 318
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG+ + MTE Y I P ++HYGC++DL GRAG + EA +++ +P E + ++ +GAL
Sbjct: 319 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLV---WGAL 375
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
LS R++G+++ E L ++E +S + LL+N+YA RWEDV +VR M+ MG++
Sbjct: 376 LSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIK 435
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
KVPGCS IE+ G++HEF VGD SH E ++I+ ML+ + + L
Sbjct: 436 KVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERL 476
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 187/395 (47%), Gaps = 83/395 (21%)
Query: 56 YNLLIKAFAK-----KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
+N LI+A + G + +F ++R GV PD T+PF+ ++ + G V
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE---------------------- 148
H +++ GL D +V S++ MY G + +++FDE
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 149 ---------MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ-GCN-LMPDEGTVVSTL 197
MP+++V+SW+ I+G+V+C ++++A+ +FR M+ G N + P+E T+ L
Sbjct: 147 DMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVL 206
Query: 198 SACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNV 255
+AC L LE GK H YI++ + ++G AL+DMY KCG + +A +F + PNK+V
Sbjct: 207 AACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDV 266
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
+ W++M+SG G E E V LF +M
Sbjct: 267 MAWSAMISGLAMHGLAE-------------------------------ECVGLFSKMINQ 295
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD-AVVAT-----ALIEMYAKC 369
++P+ +A+ C G + +GK Y+ R+T D +++ T ++++Y +
Sbjct: 296 GVRPNAVTFLAVFCACVHGGLVSEGK---DYL--RRMTEDYSIIPTIQHYGCMVDLYGRA 350
Query: 370 GLIEKALEIFYEL-REKDAASWTSIICGLAMNGKI 403
G I++A + + E D W +++ G M+G I
Sbjct: 351 GRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDI 385
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 43/307 (14%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA-- 62
+ + AQI + GL +P L+ + S GNL +A ++F I P L ++N +I A
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLI--SMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANF 141
Query: 63 -----------------------------FAKKGSFRKSLLLFSKLRERGVS---PDNFT 90
+ + G ++++L LF +++ GV+ P+ FT
Sbjct: 142 QAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFT 201
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM- 149
V A G LG ++ G+ H Y+ K G+ D + +++DMY G + +F +
Sbjct: 202 MSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLG 261
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLEL 208
P+KDV++W+ ISG E+ V +F +M QG + P+ T ++ AC +
Sbjct: 262 PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQG--VRPNAVTFLAVFCACVHGGLVSE 319
Query: 209 GKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGY 265
GK+ R + ++ P + + ++D+Y + G + EA + MP +V+ W +++SG
Sbjct: 320 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGS 379
Query: 266 VNCGQLE 272
G +E
Sbjct: 380 RMHGDIE 386
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 342/598 (57%), Gaps = 41/598 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q K++ A++ ++G + E + + G++ A ++F ++ ++++ +I
Sbjct: 328 LEQGKKVHARMKEVGW--DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
FA+ G ++ L F+K+ E G+ P+ T+ + A +K+G+++ ++++ G
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V +++ MY G + + ++F+++ ++VV+WN I+ +V+ ++++A+ F+ +
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505
Query: 181 -RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCG 238
++G + P+ T S L+ C + +LELGK +H I + LE + NAL+ M+
Sbjct: 506 LKEG--IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMF---- 559
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
VNCG L A++LF+ P RD+V W +I G+VQ
Sbjct: 560 ---------------------------VNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ 592
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ A F+ MQ +KPDK LL CA AL +G+ +H I E D +V
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLV 652
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T LI MY KCG IE A ++F++L +K+ SWTS+I G A +G+ +ALELF QM G
Sbjct: 653 GTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGV 712
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD ITF+G LSAC+H GL++EG F +M E + I+P++EHYGC++DL GRAGLL+EA
Sbjct: 713 KPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAV 771
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E I K+ E + + +GALL AC+++ NV++ EK A +++ D+ +L+NIYA
Sbjct: 772 EFIIKMQVEPDSRV---WGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYA 828
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+A W++V +R+ M + GV K PG S IE++G +H F D +H + +EI++ L+R+
Sbjct: 829 AAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERL 886
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 258/491 (52%), Gaps = 41/491 (8%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N ++ +K G F +++ + ++ + TY + + + GE+++ ++ K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
+G++ D ++ N++++MY G + K++FD+M +KDV SWN+ + G+V+ +E+A +
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
+M Q ++ PD+ T VS L+AC +N++ G+E++ I K
Sbjct: 199 HEQMVQD-SVKPDKRTFVSMLNACADARNVDKGRELYNLI------------------LK 239
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G + ++ T++++ ++ CG + A +FD P RD+V WT+MI G
Sbjct: 240 AGW------------DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGL 287
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+ RF +A LF+ M+ ++PDK V+LL C ALEQGK +H + E +
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI 347
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V TA++ MY KCG +E ALE+F ++ ++ SWT++I G A +G+I++A F++MI
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLD 475
G +P+ +TF+ +L ACS + G++ + + E Y ++ L+ + + G L
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLK 465
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD--MGEKLAALLEKIESKDSSFHTLL 533
+A + KI +N V + A+++A + D + A L E I+ S+F ++L
Sbjct: 466 DAHRVFEKISKQN----VVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521
Query: 534 ANIYASANRWE 544
N+ S++ E
Sbjct: 522 -NVCKSSDSLE 531
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/587 (25%), Positives = 271/587 (46%), Gaps = 68/587 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++I I + G+Q P+ + + + GN + A++IF ++ + ++NLL+ +
Sbjct: 130 ERIYNHIKKSGVQ--PDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + ++ L ++ + V PD T+ + A V KG +++ ++K G + D +
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V ++++M+ G I + K+FD +P +D+V+W I+G + RF+ A ++F+RM +
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE- 306
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEA 243
+ PD+ VS L AC + LE GK++H + + T I +G A+L MY K
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTK------- 359
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
CG +E A ++FD R++V WTAMI G+ Q R D
Sbjct: 360 ------------------------CGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRID 395
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA F +M ++P++ +++L C+ AL++G+ I +I E D V TAL+
Sbjct: 396 EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALL 455
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKCG ++ A +F ++ +++ +W ++I + + + AL F ++ G KP+
Sbjct: 456 SMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSS 515
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF +L+ C ++ G ++ + + ++ L L+ + G L A+ L
Sbjct: 516 TFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFND 574
Query: 484 IPNEN----NEIIVPL---------------------------YGALLSACRIYGNVDMG 512
+P + N II + LL+AC + G
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 513 EKLAALL-EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+L AL+ E D T L ++Y ED V K+ + V
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNV 681
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 33/301 (10%)
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
+ ++D A++N + +F+EA+ + + ++ + ALL C + L G
Sbjct: 70 ADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+ I+ +I ++ + D + LI MYAKCG A +IF ++REKD SW ++ G +
Sbjct: 130 ERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM------------ 448
G +A +L QM+ KPD TF+ +L+AC+ VD+GR +N +
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 449 ----------------TEVYQIQPK--LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
T+V+ P L + +I L R G +A L +++ E +
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH--TLLANIYASANRWEDVTN 548
+ +LL AC ++ G+K+ A ++++ D+ + T + ++Y ED
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 549 V 549
V
Sbjct: 369 V 369
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 340/652 (52%), Gaps = 88/652 (13%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-----YAEKIFGSIQSPCLLAYN 57
L QI AQ GL + ++L++F T + LL ++ ++FG ++SP N
Sbjct: 19 HLLQIHAQFLASGLLADAYAASRLLLFTTSATAARLLPHPLHHSLQLFGLVRSPNAFTCN 78
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
L+KA ++G L++ + +PD +T+P + A G+V++G +VH + VK
Sbjct: 79 TLLKAALRQGFPHLCFPLYASMP---AAPDTYTHPLLAAACAARGDVREGLQVHSHSVKH 135
Query: 118 GLE-------------------------------FDTYVCNSIMDMYGVLGKICNVKKLF 146
G +D N+I+ Y G + K+F
Sbjct: 136 GFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVKVF 195
Query: 147 DEMPDK-------------------------------DVVSWNVSISGHVKCMRFEDAVD 175
MP++ D +W +S + F +A+
Sbjct: 196 TRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALA 255
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMY 234
VF MR+ DE +VS ++AC ++ G+ H + + L + N L+ MY
Sbjct: 256 VFSDMREE-GWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMY 314
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
C + AR LFD + + W SM+SGY+ G++E A+ LFD P +D V W+AMI
Sbjct: 315 SSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIA 374
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
G V N+ EA+ +F M+ +KPD LV++++ C+ L ALEQGK +H YI + + +
Sbjct: 375 GCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNI 434
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM- 413
V+ T+LI+MY KCG +E ALE+F L EK W ++I GLAMNG + ++L++FS+M
Sbjct: 435 TIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEME 494
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
+G A P++ITF GVLSAC HGGLV+EGR+FF M YQI P + HYGC++DLLGRAG
Sbjct: 495 ATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGY 554
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
+ EAE++I+ +P + VP +GALL AC +G+ ++GE++ L K++ F T+L
Sbjct: 555 VREAEDMIQSMPMSPD---VPAWGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTML 611
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSE 585
+NIYAS W+ V ++R MK+ V KV GCS +E PSHS
Sbjct: 612 SNIYASEGMWQCVKDLRGSMKQQHVAKVAGCSMVE------------PSHSS 651
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 341/618 (55%), Gaps = 48/618 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNK-LMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+ QI Q+ GL Q P + + C+ P ++ +A +F ++ P N +++
Sbjct: 74 EFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPD--SVQHAVSLFEGLEEPDAFICNTIMR 131
Query: 62 AFAKKGSFRKSL-LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ +L + ++ + V+P+++T+P + K +G + GEK+H ++K G E
Sbjct: 132 TYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFE 191
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V NS++ MY V G+I + + +F+ D+V+WN I G+VK A ++F M
Sbjct: 192 LDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEM 251
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ +++ + N+++ Y G +
Sbjct: 252 PE---------------------------RDLFSW------------NSMIAGYVGNGDM 272
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ A +LF++MP ++++ W M+ GY +E A +LF+ P R++V W M+ YV+
Sbjct: 273 TAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIK 332
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVA 359
+DE + +F +M + P++ LV++LT CA LG L++GKWIH YI NR I D +++
Sbjct: 333 DYDECLRMFDKM-MGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLS 391
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TAL+ MYAKCG ++ A ++F ++ + SW S+I G M+G+ +KALE+F M G
Sbjct: 392 TALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPM 451
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+D TFI VLSAC+H G++ EG +F+ M Y+I+PK+EHYGC++DLLGRAGL+ + EE
Sbjct: 452 PNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEE 511
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LIRK+P E L+GALLSACR + N ++ E +A L ++E +D + LL+NIYA+
Sbjct: 512 LIRKMPMEGG---TALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAA 568
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
+W+DV VR+ MKE G+ K G S + I + V S +YS+L MA
Sbjct: 569 EGKWDDVEIVRKMMKERGLTKTTGFSWVHIEEFGTQSFVEKASVHRKSMMYSILSDMATQ 628
Query: 600 LLDSKQNAMEGDNLVAIN 617
+ S + E +NL ++
Sbjct: 629 MKLSCGDYDEVENLTEVH 646
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 342/598 (57%), Gaps = 41/598 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q K++ A++ ++G + E + + G++ A ++F ++ ++++ +I
Sbjct: 328 LEQGKKVHARMKEVGW--DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
FA+ G ++ L F+K+ E G+ P+ T+ + A +K+G+++ ++++ G
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V +++ MY G + + ++F+++ ++VV+WN I+ +V+ ++++A+ F+ +
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505
Query: 181 -RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCG 238
++G + P+ T S L+ C + +LELGK +H I + LE + NAL+ M+
Sbjct: 506 LKEG--IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMF---- 559
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
VNCG L A++LF+ P RD+V W +I G+VQ
Sbjct: 560 ---------------------------VNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ 592
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ A F+ MQ +KPDK LL CA AL +G+ +H I E D +V
Sbjct: 593 HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLV 652
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T LI MY KCG IE A ++F++L +K+ SWTS+I G A +G+ +ALELF QM G
Sbjct: 653 GTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGV 712
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
KPD ITF+G LSAC+H GL++EG F +M E + I+P++EHYGC++DL GRAGLL+EA
Sbjct: 713 KPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAV 771
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E I K+ E + + +GALL AC+++ NV++ EK A +++ D+ +L+NIYA
Sbjct: 772 EFIIKMQVEPDSRV---WGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYA 828
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+A W++V +R+ M + GV K PG S IE++G +H F D +H + +EI++ L+R+
Sbjct: 829 AAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERL 886
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 258/491 (52%), Gaps = 41/491 (8%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N ++ +K G F +++ + ++ + TY + + + GE+++ ++ K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
+G++ D ++ N++++MY G + K++FD+M +KDV SWN+ + G+V+ +E+A +
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
+M Q ++ PD+ T VS L+AC +N++ G+E++ I K
Sbjct: 199 HEQMVQD-SVKPDKRTFVSMLNACADARNVDKGRELYNLI------------------LK 239
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G + ++ T++++ ++ CG + A +FD P RD+V WT+MI G
Sbjct: 240 AGW------------DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGL 287
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+ RF +A LF+ M+ ++PDK V+LL C ALEQGK +H + E +
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI 347
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V TA++ MY KCG +E ALE+F ++ ++ SWT++I G A +G+I++A F++MI
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLD 475
G +P+ +TF+ +L ACS + G++ + + E Y ++ L+ + + G L
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLK 465
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD--MGEKLAALLEKIESKDSSFHTLL 533
+A + KI +N V + A+++A + D + A L E I+ S+F ++L
Sbjct: 466 DAHRVFEKISKQN----VVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521
Query: 534 ANIYASANRWE 544
N+ S++ E
Sbjct: 522 -NVCKSSDSLE 531
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 258/556 (46%), Gaps = 66/556 (11%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GN + A++IF ++ + ++NLL+ + + G + ++ L ++ + V PD T+ +
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSML 218
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A V KG +++ ++K G + D +V ++++M+ G I + K+FD +P +D+V
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I+G + RF+ A ++F+RM + + PD+ VS L AC + LE GK++H
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEE-GVQPDKVAFVSLLRACNHPEALEQGKKVHAR 337
Query: 216 INQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + T I +G A+L MY K CG +E A
Sbjct: 338 MKEVGWDTEIYVGTAILSMYTK-------------------------------CGSMEDA 366
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
++FD R++V WTAMI G+ Q R DEA F +M ++P++ +++L C+
Sbjct: 367 LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSP 426
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
AL++G+ I +I E D V TAL+ MYAKCG ++ A +F ++ +++ +W ++I
Sbjct: 427 SALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMI 486
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
+ + + AL F ++ G KP+ TF +L+ C ++ G ++ + + +
Sbjct: 487 TAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGL 545
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPL--------------- 495
+ L L+ + G L A+ L +P + N II
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKM 605
Query: 496 ------------YGALLSACRIYGNVDMGEKLAALL-EKIESKDSSFHTLLANIYASANR 542
+ LL+AC + G +L AL+ E D T L ++Y
Sbjct: 606 MQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGS 665
Query: 543 WEDVTNVRQKMKEMGV 558
ED V K+ + V
Sbjct: 666 IEDAHQVFHKLPKKNV 681
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 33/301 (10%)
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
+ ++D A++N + +F+EA+ + + ++ + ALL C + L G
Sbjct: 70 ADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+ I+ +I ++ + D + LI MYAKCG A +IF ++REKD SW ++ G +
Sbjct: 130 ERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM------------ 448
G +A +L QM+ KPD TF+ +L+AC+ VD+GR +N +
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 449 ----------------TEVYQIQPK--LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
T+V+ P L + +I L R G +A L +++ E +
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH--TLLANIYASANRWEDVTN 548
+ +LL AC ++ G+K+ A ++++ D+ + T + ++Y ED
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 549 V 549
V
Sbjct: 369 V 369
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 312/517 (60%), Gaps = 11/517 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMY--GVLGKICNVKKLFDEMPDKDVVSWNVSISGH- 164
++ H +++ TGL N ++ + G + +LFD++P DV +N I H
Sbjct: 32 KQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHA 91
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFT 223
V +++ +F M + +P+ T V AC + G++I + I LE
Sbjct: 92 VIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESN 151
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ NA++ MY G + EAR +FD ++++ W M+ GYV G++ +A+++FD
Sbjct: 152 LFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSE 211
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
RD+V WT +I GYVQ F EA+ LF EM P++F L + L CA L AL+QG+WI
Sbjct: 212 RDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWI 271
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIF---YELREKDAASWTSIICGLAMN 400
H YI+++ I ++ + +L++MYAKCG I+ A ++F Y L+ K W ++I G AM+
Sbjct: 272 HVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMH 330
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
GK +A++LF QM P+ +TF+ +L+ACSHG LV+EGR +F +M Y I+P++EH
Sbjct: 331 GKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEH 390
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC++DLLGR+GLL EAEE + +P + I +GALL ACRI+ +++ G+++ +++
Sbjct: 391 YGCMVDLLGRSGLLKEAEETVFNMPMAPDATI---WGALLGACRIHKDIERGQRIGKIIK 447
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+++S H LLAN+Y+++ +W++ VRQK++ G +K PGCSSIE+NG+ H+FLVGD
Sbjct: 448 ELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGD 507
Query: 581 PSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDNLVAIN 617
SH + K++Y LD M L ++ G+ L+ I+
Sbjct: 508 RSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDID 544
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 232/524 (44%), Gaps = 111/524 (21%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M Q+KQ A + GL +P T NKL+ S G+L YA ++F I P + YN +I
Sbjct: 28 MNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMI 87
Query: 61 KAFA--KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
KA A S + S +R G P+ +T+ FVFKA G V +GE++ + +K G
Sbjct: 88 KAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIG 147
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS------------------ 160
LE + +V N+++ MY G + +++FD D+D+ SWN+
Sbjct: 148 LESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFD 207
Query: 161 -------------ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
I+G+V+ F++A+D+F M Q P+E T+ S L+AC L L+
Sbjct: 208 EMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQ-TGPPPNEFTLASALAACANLVALD 266
Query: 208 LGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELF-DEMPNK-NVICWTSMVSG 264
G+ IH YI++ E++ + +LLDMY KCG + A ++F DE K V W +M+ G
Sbjct: 267 QGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGG 326
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
Y G+ ++A DLF+ +M++ ++ P+K
Sbjct: 327 YAMHGKSKEAIDLFE-------------------------------QMKVEKVSPNKVTF 355
Query: 325 VALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
VALL C+ +E+G+ + + I + ++++ + GL+++A E + +
Sbjct: 356 VALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMP 415
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
PD + +L AC ++ G+R
Sbjct: 416 ----------------------------------MAPDATIWGALLGACRIHKDIERGQR 441
Query: 444 FFNTMTEVYQIQPKLEHYGC---LIDLLGRAGLLDEAEELIRKI 484
+ E+ +H GC L +L +G DEA+ + +KI
Sbjct: 442 IGKIIKEL-----DSDHIGCHVLLANLYSASGQWDEAKAVRQKI 480
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/502 (37%), Positives = 316/502 (62%), Gaps = 12/502 (2%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H +++T + D +V ++ + L + +F + + +V + I G V R
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMG 227
D V ++ RM +++PD + S L AC +L++ +EIH + +L F + +G
Sbjct: 108 SADGVSLYHRMIHN-SVLPDNYVITSVLKAC----DLKVCREIHAQV-LKLGFGSSRSVG 161
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
++++Y K G L A+++FDEMP+++ + T M++ Y CG +++A +LF ++D V
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
WTAMI+G V+ ++A+ LFREMQ+ + ++F V +L+ C+ LGALE G+W+H ++
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
R+ + V ALI MY++CG I +A +F +R+KD S+ ++I GLAM+G +A+
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAI 341
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
F M++ G +P+ +T + +L+ACSHGGL+D G FN+M V+ ++P++EHYGC++DL
Sbjct: 342 NEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDL 401
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGR G L+EA I IP E + I++ G LLSAC+I+GN+++GEK+A L + E+ DS
Sbjct: 402 LGRVGRLEEAYRFIENIPIEPDHIML---GTLLSACKIHGNMELGEKIAKRLFESENPDS 458
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ LL+N+YAS+ +W++ T +R+ M++ G+ K PGCS+IE++ IHEFLVGD +H +
Sbjct: 459 GTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKE 518
Query: 588 EIYSMLDRMAKTLLDSKQNAME 609
IY L + + +L K+N ++
Sbjct: 519 AIYQRLQELNR-ILRFKENQID 539
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 207/456 (45%), Gaps = 83/456 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ + I A+I + Q+ + +L+ C+ + ++ YA +F + +P + Y +I
Sbjct: 42 IAHVPSIHAKIIRTFHDQDAFVVFELIRVCS--TLDSVDYAYDVFSYVSNPNVYLYTAMI 99
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F G + L+ ++ V PDN+ V KA ++K ++H V+K G
Sbjct: 100 DGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFG 155
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPD----------------------------- 151
V +M++YG G++ N KK+FDEMPD
Sbjct: 156 SSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDV 215
Query: 152 --KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
KD V W I G V+ A+++FR M Q N+ +E T V LSAC+ L LELG
Sbjct: 216 KIKDTVCWTAMIDGLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALELG 274
Query: 210 KEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ +H ++ NQ +E + +GNAL++MY +CG ++EAR +F M +K+VI + +M+SG
Sbjct: 275 RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMH 334
Query: 269 GQLEKA----RDLFDRSPVRDIVLWTAMIN----------GYVQFN-------------- 300
G +A RD+ +R + V A++N G FN
Sbjct: 335 GASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEH 394
Query: 301 ------------RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
R +EA +R ++ I ++PD +L LL+ C G +E G+ I +
Sbjct: 395 YGCIVDLLGRVGRLEEA---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLF 451
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
E+ D+ L +YA G +++ EI +R+
Sbjct: 452 ESE-NPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 300/494 (60%), Gaps = 11/494 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDM--YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++ H V TGL+ +T+ + ++ + G + ++F+ + + N I +
Sbjct: 22 KQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFERIHHPTLCICNTIIKTFL 81
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTP 224
F VF +M L PD T+ L AC AL++ LGK +H Y ++ L F
Sbjct: 82 VNGNFYGTFHVFTKMLHN-GLGPDNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLVFDI 140
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+GN+L+ MY CG + AR +FDEMP + + W+ M+SGY G ++ AR FD +P +
Sbjct: 141 FVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDVDSARLFFDEAPEK 200
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
D +W AMI+GYVQ + F E + LFR +Q+ + PD+ I V++L+ CA LGAL+ G WIH
Sbjct: 201 DRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGIWIH 260
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
Y+N +++ ++T+L++MYAKCG +E A +F + E+D W ++I GLAM+G
Sbjct: 261 RYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMISGLAMHGDGA 320
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
AL++FS+M G KPDDITFI V +ACS+ G+ EG + + M+ +Y+I+PK EHYGCL
Sbjct: 321 SALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCL 380
Query: 465 IDLLGRAGLLDEAEELIRKIP----NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
+DLL RAGL EA +IR+I N + E + + A LSAC +G + E+ A L
Sbjct: 381 VDLLSRAGLFGEAMVMIRRITSTSWNGSEETLA--WRAFLSACCNHGQAQLAERAAKRLL 438
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++E+ S + LL+N+YA++ + D VR M+ GV K PGCSS+EI+G++ EF+ G+
Sbjct: 439 RLENH-SGVYVLLSNLYAASGKHSDARRVRNMMRNKGVDKAPGCSSVEIDGVVSEFIAGE 497
Query: 581 PSHSEMKEIYSMLD 594
+H +M+EI+S+L+
Sbjct: 498 ETHPQMEEIHSVLE 511
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 208/422 (49%), Gaps = 66/422 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQ AQ+F GL N L++L+ FC+HP G+L YA ++F I P L N +I
Sbjct: 18 VNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFERIHHPTLCICNTII 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K F G+F + +F+K+ G+ PDN+T P+V KA L + G+ VHGY K GL
Sbjct: 78 KTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLV 137
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC-------MRFEDA 173
FD +V NS+M MY V G + + +FDEMP VSW+V ISG+ K + F++A
Sbjct: 138 FDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDVDSARLFFDEA 197
Query: 174 VDVFR-----------------------RMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+ R R+ Q +++PDE VS LSAC L L++G
Sbjct: 198 PEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGI 257
Query: 211 EIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IHRY+N++ + + + +LLDMY KCG L A+ LFD MP ++++CW +M+SG G
Sbjct: 258 WIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMISGLAMHG 317
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
A+ +F EM+ +KPD +A+ T
Sbjct: 318 DGA-------------------------------SALKMFSEMEKTGIKPDDITFIAVFT 346
Query: 330 GCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
C+ G +G + + + I + L+++ ++ GL +A+ + +R +
Sbjct: 347 ACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVM---IRRITST 403
Query: 389 SW 390
SW
Sbjct: 404 SW 405
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+ +I + + F++ L LF L+ V PD + + A LG + G +H Y+
Sbjct: 205 WGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGIWIHRYLN 264
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
+ + + S++DMY G + K+LFD MP++D+V WN ISG A+
Sbjct: 265 RKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMISGLAMHGDGASALK 324
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDM 233
+F M + + PD+ T ++ +AC+ G ++ ++ E P + L+D+
Sbjct: 325 MFSEMEK-TGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLVDL 383
Query: 234 YCKCGCLSEARELFDEMPNKN------VICWTSMVSGYVNCGQLEKA 274
+ G EA + + + + + W + +S N GQ + A
Sbjct: 384 LSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLSACCNHGQAQLA 430
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/507 (37%), Positives = 305/507 (60%), Gaps = 13/507 (2%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+ HG V+ L +YV I+ + G+ + ++F +P ++ N I + +
Sbjct: 28 RAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAHVPAPNLHLHNAMIKAYAQNH 87
Query: 169 RFEDAVDVFRRM--------RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE- 219
DAV+V+ RM G + D T L AC L +LG+++H ++ +
Sbjct: 88 LHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHAHVARSG 147
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
E I+ N+L++MY +CG LS AR++FD M K+ + W +++S + GQ+ KAR+LF
Sbjct: 148 CESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLISAHARMGQMRKARELFH 207
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P + +V WTA+++GY F AV +FR+MQ+ +PD +VA+L CAQLGALE
Sbjct: 208 SMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPACAQLGALEL 267
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G+WI+ Y N++ + + AL+EMYAKCG IE+AL++F+ + EKD SW++ I GLA
Sbjct: 268 GRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAA 327
Query: 400 NGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+G+ +A++LF M G P+ ITF+G+LSACSH GL+DEG R+F+ M E Y ++P +
Sbjct: 328 HGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSV 387
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
EHYGC++DLLGR+G + A + I +P + I +G+LLSACR + +VD A
Sbjct: 388 EHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKI---WGSLLSACRSHSDVDTAVVAAER 444
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
L ++E +D +LAN+YA+A RW +V + R++++ RK PGCS IE++ ++ EF+
Sbjct: 445 LVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRKTPGCSMIEVDNVVREFVA 504
Query: 579 GDPSHSEMKEIYSMLDRMAKTLLDSKQ 605
G+ E+ I +++D +A L D ++
Sbjct: 505 GEDLGPELGGIAAIIDILASQLADDEE 531
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 207/451 (45%), Gaps = 78/451 (17%)
Query: 16 LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLL 75
L Q+ +++ C HG +A ++F + +P L +N +IKA+A+ R ++ +
Sbjct: 38 LSQSSYVATQIVHVCN--GHGRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEV 95
Query: 76 FSKLRERGVSP---------DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
+ ++ P D FTYPF+ KA G L + G +VH +V ++G E V
Sbjct: 96 YVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQ 155
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR--------------- 169
NS+++MY G + +K+FD M +KD VSWN IS H + MR
Sbjct: 156 NSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLISAHARMGQMRKARELFHSMPDKTVV 215
Query: 170 --------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
F AV+VFR+M Q PD+ ++V+ L AC L LELG+ I+ Y
Sbjct: 216 SWTALVSGYTAVGDFAGAVEVFRQM-QMEGFEPDDVSIVAVLPACAQLGALELGRWIYAY 274
Query: 216 INQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
N+ I + NAL++MY KCGC+ EA +LF M K+VI W++ + G G+ +A
Sbjct: 275 CNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREA 334
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
LF+ + RE +++ P+ V LL+ C+
Sbjct: 335 VKLFE---------------------------VMDREGRVM---PNGITFVGLLSACSHA 364
Query: 335 GALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTS 392
G L++G ++ E + ++++ + G I++AL+ + D W S
Sbjct: 365 GLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGS 424
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDI 423
++ + ++ A+ +++ +P+D+
Sbjct: 425 LLSACRSHSDVDTAVVAAERLVE--LEPEDV 453
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/590 (36%), Positives = 337/590 (57%), Gaps = 24/590 (4%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNL--LI 60
+L Q+ A + GL N + FC S L + SP AY L ++
Sbjct: 50 RLLQLHALLTVTGLAGNGFPAFGFLAFCAL-STPPRLAHAAAILARASPGPNAYMLGTMM 108
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL------GEVKKGEKVHGYV 114
+ F + ++L LF ++ + D T+ F KA G GE +H
Sbjct: 109 RGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIHCAA 168
Query: 115 VKTGLEFDTY-VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
+K G ++ V N+++ Y + + K+FDEMP++DVVSW + G+ + ++A
Sbjct: 169 LKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEA 228
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLD 232
+F RM + P+ T+V+ +SA + L G +H+Y+ + + + + NAL+D
Sbjct: 229 WRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVD 288
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
M+ KCGC+ ARE+FD M K+V WTSMV+ Y CG LE A LF P R++V W+ M
Sbjct: 289 MFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCM 348
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH-GYINENR 351
I Y Q N+ +EAV LFREM + P LV++L+ CAQLG L+ G+WI+ YI N+
Sbjct: 349 IAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNK 408
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
I + + ALI+M+AKCG + +A ++F E+ E++ SW ++I A++G+ +A+ LF
Sbjct: 409 IGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFE 468
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
Q+ PD ITF+G+L++CSH GLV EGRR+F M Y+I+P++EHY C+IDLLG+
Sbjct: 469 QLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKV 528
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
GLL+EA E+ R +P E +E +GALL+ACR++GNV++G +A L +++ DS +
Sbjct: 529 GLLEEAFEVARGMPMEADEAG---WGALLNACRMHGNVEIGACVADKLVELDPSDSGIYV 585
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
L++ IYAS N+W+ V +R M++ G ++GI E L+G+P
Sbjct: 586 LMSQIYASKNKWDQVKMLRMTMRDRGT---------VLDGIATELLLGEP 626
>gi|255553251|ref|XP_002517668.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543300|gb|EEF44832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 512
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/446 (41%), Positives = 284/446 (63%), Gaps = 2/446 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQI +Q + G P NK+ FC G++ YA ++F +I P + +N ++
Sbjct: 1 MDQLKQIHSQTIKTGTICKPIIQNKIFSFCCTQEFGDMNYARQLFDTIPEPTVFHWNTML 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K +++ S + + ++ + + V PD +TYPF+ K + G+++H +VVK GL
Sbjct: 61 KGYSRIDSPKLGVSMYLDMLKNDVLPDCYTYPFLIKGFKKDIAFEYGKELHCHVVKYGLG 120
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ +V N++++MY + G + +FD DVV+WN IS + + +++ +F M
Sbjct: 121 SNVFVQNALINMYSLCGLTDMARGIFDMSYKTDVVTWNAMISAYNRIKQYDKTKTLFHEM 180
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDMYCKCGC 239
+ ++P T+VS LSAC+ LK+LE G+++H+YI+ + + I+ NAL+DMY CG
Sbjct: 181 EKK-RVLPSSVTLVSVLSACSKLKDLESGQKVHKYISDHVVQSNLIVENALIDMYAACGE 239
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+S A +F+ M +++VI WT++V+G+ N GQL+ AR FD+ P RD V WTAMI+GY+Q
Sbjct: 240 MSVALGIFESMKSRDVISWTAIVTGFANIGQLDIARKYFDQMPERDYVSWTAMIDGYLQV 299
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
N F EA+ LF EMQ +KPD+F +V++LT CAQLGALE G+W+ YI++N++ DA V
Sbjct: 300 NCFKEALVLFHEMQTSNVKPDEFTMVSILTACAQLGALELGEWVRTYIDKNKVKNDAYVG 359
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI+MY KCG +EKA IF + D +WT++I GLA+NG +AL++F QM+
Sbjct: 360 NALIDMYFKCGNVEKARSIFNSMPRPDKFTWTAMIVGLAINGYGEEALDMFVQMLKASVT 419
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFF 445
PD+IT++GVL AC+H G+VDEGR
Sbjct: 420 PDEITYVGVLCACTHTGMVDEGRNLL 445
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 185/424 (43%), Gaps = 73/424 (17%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+++H +KTG + N I G + ++LFD +P+ V WN + G+
Sbjct: 5 KQIHSQTIKTGTICKPIIQNKIFSFCCTQEFGDMNYARQLFDTIPEPTVFHWNTMLKGYS 64
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI 225
+ + V ++ M + +++PD T + E GKE+H ++
Sbjct: 65 RIDSPKLGVSMYLDMLKN-DVLPDCYTYPFLIKGFKKDIAFEYGKELHCHV--------- 114
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
K G S NV ++++ Y CG + AR +FD S D
Sbjct: 115 ---------VKYGLGS------------NVFVQNALINMYSLCGLTDMARGIFDMSYKTD 153
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+V W AMI+ Y + ++D+ LF EM+ R+ P LV++L+ C++L LE G+ +H
Sbjct: 154 VVTWNAMISAYNRIKQYDKTKTLFHEMEKKRVLPSSVTLVSVLSACSKLKDLESGQKVHK 213
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
YI+++ + + +V ALI+MYA CG + AL IF ++ +D SWT
Sbjct: 214 YISDHVVQSNLIVENALIDMYAACGEMSVALGIFESMKSRDVISWT-------------- 259
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
+++ ++ G +D R++F+ M E + + +I
Sbjct: 260 ---------------------AIVTGFANIGQLDIARKYFDQMPERDYVS-----WTAMI 293
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
D + EA L ++ N + ++L+AC G +++GE + ++K + K
Sbjct: 294 DGYLQVNCFKEALVLFHEMQTSNVKPDEFTMVSILTACAQLGALELGEWVRTYIDKNKVK 353
Query: 526 DSSF 529
+ ++
Sbjct: 354 NDAY 357
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 8/291 (2%)
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G + AR LFD P + W M+ GY + + V+++ +M + PD + L+
Sbjct: 36 GDMNYARQLFDTIPEPTVFHWNTMLKGYSRIDSPKLGVSMYLDMLKNDVLPDCYTYPFLI 95
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
G + A E GK +H ++ + + + V ALI MY+ CGL + A IF + D
Sbjct: 96 KGFKKDIAFEYGKELHCHVVKYGLGSNVFVQNALINMYSLCGLTDMARGIFDMSYKTDVV 155
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+W ++I + +K LF +M P +T + VLSACS ++ G++ +
Sbjct: 156 TWNAMISAYNRIKQYDKTKTLFHEMEKKRVLPSSVTLVSVLSACSKLKDLESGQKVHKYI 215
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
++ + +Q L LID+ G + A + + + + V + A+++ G
Sbjct: 216 SD-HVVQSNLIVENALIDMYAACGEMSVALGIFESMKSRD----VISWTAIVTGFANIGQ 270
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
+D+ K +++ +D T + + Y N +++ + +M+ V+
Sbjct: 271 LDIARK---YFDQMPERDYVSWTAMIDGYLQVNCFKEALVLFHEMQTSNVK 318
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/631 (33%), Positives = 339/631 (53%), Gaps = 69/631 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVF----------------CT------------- 31
++Q +QI + +F+ GL N N L+ F C+
Sbjct: 68 LSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAG 127
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ G+L A +F + ++Y ++ A+ + +++ +F +R GV P+ T
Sbjct: 128 YVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTL 187
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V A +G + +H K GLE V +++ MY V + N + LFDE+P+
Sbjct: 188 ASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPE 247
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRR-------------------------------- 179
++VV+WNV ++G+ K + A D+F R
Sbjct: 248 RNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSM 307
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCG 238
+R G P+E +V +SAC + G++ H I + + + ++ Y CG
Sbjct: 308 LRTGVG--PNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACG 365
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
++ A F+ +V W +++SG+V G +E+AR LFD P RD+ W++MI+GY Q
Sbjct: 366 EINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQ 425
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ D A+ LF EM ++P++ +V++ + A LG L +G+W H YI N I ++ +
Sbjct: 426 NEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNL 485
Query: 359 ATALIEMYAKCGLIEKALEIFYELREK--DAASWTSIICGLAMNGKINKALELFSQMISG 416
ALI+MYAKCG I AL++FYE++++ + W +IICGLAM+G N +L+LFSQ+
Sbjct: 486 NAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRV 545
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KP+ ITFIGVLSAC H GLVD G ++F M +Y I+P ++HYGC+IDLLGRAG L E
Sbjct: 546 RIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKE 605
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A E+IRK+P + + +I +G LL+ACR +GNV++GE+ A L K++ + LL+NI
Sbjct: 606 AAEMIRKMPMKADVVI---WGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNI 662
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
YA A RW+D VR+ M+ ++K PGCS +
Sbjct: 663 YADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 693
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 244/497 (49%), Gaps = 67/497 (13%)
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
K+ L + +G+++H V K+GL + +V NS++ Y I N + LFD D
Sbjct: 59 LKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDP 118
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMR-QGC----------------------------- 184
VS N+ ++G+VK ++A +F +M +GC
Sbjct: 119 VSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFA 178
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
++P+E T+ S +SA + + + + +H LE I+ L+ MYC C L A
Sbjct: 179 GVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNA 238
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R LFDE+P +NV+ W M++GY G ++ ARDLF+R P +D+V W +I+GYVQ R
Sbjct: 239 RVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLG 298
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ ++R M + P++ ++V L++ C + A+ +G+ HG I + +I
Sbjct: 299 EALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATII 358
Query: 364 EMYAKC-------------------------------GLIEKALEIFYELREKDAASWTS 392
YA C G+IE+A ++F E+ E+D SW+S
Sbjct: 359 HFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSS 418
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN-TMTEV 451
+I G + N + + AL+LF +M++GG +P++IT + V SA + G + EGR ++
Sbjct: 419 MISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNS 478
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
+ L LID+ + G + A +L +I + + V + A++ ++G+ ++
Sbjct: 479 IPLNDNLN--AALIDMYAKCGSITIALQLFYEIQDRVSS--VSPWNAIICGLAMHGHANV 534
Query: 512 GEKLAALLEKIESKDSS 528
KL + L+++ K +S
Sbjct: 535 SLKLFSQLQRVRIKPNS 551
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 167/361 (46%), Gaps = 62/361 (17%)
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFD 248
E T+VS L +C++L L G++IH + + + I + N+L+ Y KC +S AR LFD
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+ + M++GYV G L+ AR LF++ P++ V +T M+ G Q N + EA+ +
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F++M+ + P++ L ++++ + +G + + +H + + +VAT L+ MY
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCV 231
Query: 369 C-------------------------------GLIEKALEIFYELREKDAASWTSIICGL 397
C GL++ A ++F + KD SW +II G
Sbjct: 232 CSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGY 291
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT----EVYQ 453
++ +AL ++ M+ G P+++ + ++SAC V EG++F + + Y
Sbjct: 292 VQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYD 351
Query: 454 -IQPKLEHY-------------------------GCLIDLLGRAGLLDEAEELIRKIPNE 487
IQ + H+ LI R G++++A +L ++P
Sbjct: 352 FIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPER 411
Query: 488 N 488
+
Sbjct: 412 D 412
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 122/306 (39%), Gaps = 49/306 (16%)
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W + + + D A F + + + LV+ L C+ L AL QG+ IH +
Sbjct: 20 WVSAAPSQLPPHPIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVF 79
Query: 349 ENRITVDAVVATALIEMYAKCGLI-------------------------------EKALE 377
++ + + V +LI Y KC LI + A
Sbjct: 80 KSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARH 139
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH-GG 436
+F ++ K S+T+++ GLA N +A+ +F M G P+++T V+SA SH GG
Sbjct: 140 LFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGG 199
Query: 437 LVD----EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
+++ F + + + L H C+ LG A +L + +IP N
Sbjct: 200 ILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFD------EIPERN---- 249
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
V + +L+ G VD+ L E+I +KD + + Y R + + +
Sbjct: 250 VVTWNVMLNGYSKSGLVDLARD---LFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRS 306
Query: 553 MKEMGV 558
M GV
Sbjct: 307 MLRTGV 312
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/507 (37%), Positives = 308/507 (60%), Gaps = 13/507 (2%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+VHG+VV+ + +Y+ I+ + ++ + ++F ++ D ++ N I + +
Sbjct: 32 RVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNH 91
Query: 169 RFEDAVDVFRRMRQGCNLMPDEG-------TVVSTLSACTALKNLELGKEIHRYINQE-L 220
+ DAV V+ RM + C P +G T L AC LELGK++H ++ +
Sbjct: 92 QHRDAVAVYIRMLR-CPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGC 150
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ + I+ N+L++MY + G L+ A ++FDEM ++V+ W ++S + GQ+ KA LF+
Sbjct: 151 DSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNS 210
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P + IV WTAM++GY + AV FR MQ +PD +VA+L CAQLG LE G
Sbjct: 211 MPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGTLELG 270
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+WI+ Y + + + AL+EMYAKCG I++AL++F + +KD SW+++I GLA +
Sbjct: 271 RWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAH 330
Query: 401 GKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
G+ ++A+ LF++M G +P+ ITF+G+LSACS+ GLVDEG F+ M +VY ++P +E
Sbjct: 331 GRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVE 390
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGC++DLLGR+G + A +L+R +P + ++G+LLSACR +G+VD A L
Sbjct: 391 HYGCVVDLLGRSGQIRRALDLVRDMPVPAD---AKVWGSLLSACRSHGDVDTAVLAAERL 447
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E D +LAN+YA+A RW DV + R+ ++ +RK PGCS IE+ ++ EF+ G
Sbjct: 448 VELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAG 507
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDSKQN 606
+ SE+ + +LD +A L D +++
Sbjct: 508 EGLSSELGGLAGVLDILASHLADDEED 534
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 222/462 (48%), Gaps = 78/462 (16%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L ++ + ++ + Q+ +++ C +H + +A ++F ++ P L +N +IKA+
Sbjct: 30 LLRVHGHVVRLRISQSSYLATQIVHLCN--AHRRVTHAARVFAQVRDPNLHLHNAMIKAY 87
Query: 64 AKKGSFRKSLLLFSKLRERGVSP-------DNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
A+ R ++ ++ ++ SP D FTYPF+ KA G ++ G++VH +VV+
Sbjct: 88 AQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVR 147
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR----- 169
+G + V NS+++MY G + K+FDEM ++DVVSWN+ IS H + MR
Sbjct: 148 SGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATAL 207
Query: 170 ------------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
+ AVD FR M Q PD+ ++V+ L AC L
Sbjct: 208 FNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSM-QTEGFEPDDVSIVAVLPACAQLGT 266
Query: 206 LELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
LELG+ I+ Y + T + NAL++MY KCGC+ +A +LFD M +K+VI W++++ G
Sbjct: 267 LELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGG 326
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFI 323
G R EAV LF EM+ +++P+
Sbjct: 327 LAAHG-------------------------------RAHEAVWLFTEMEKEGKVRPNVIT 355
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYEL 382
V LL+ C+ G +++G +N+ V ++++ + G I +AL++ ++
Sbjct: 356 FVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDM 415
Query: 383 R-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
DA W S++ +G ++ A+ +++ +PDD+
Sbjct: 416 PVPADAKVWGSLLSACRSHGDVDTAVLAAERLVE--LEPDDV 455
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 357/637 (56%), Gaps = 55/637 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC---LLAYNLLIK 61
+QI +QI G ++ + V + G + A+++F C LL +N +++
Sbjct: 889 QQIHSQIIVTGSHRSAFLAAR--VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILR 946
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A G ++L ++ ++R+ GVS D FT+P V +A +G K VHG+VV+ G ++
Sbjct: 947 ANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQW 1006
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG------------------ 163
+ +V N +M MYG +G++ + +K+F+ M + VSWN +SG
Sbjct: 1007 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 1066
Query: 164 -----------------HVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKN 205
H +C + + +++F RMR +G + VV LS L
Sbjct: 1067 SAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVV--LSVSVDLAA 1124
Query: 206 LELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+ GK IH Y+ + E + N+L+ +Y K G ++ AR LF E+ KN++ W +++S
Sbjct: 1125 FDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISS 1184
Query: 265 YVNCGQLEKARDLF------DRSP-VR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
Y + G ++A +F D P VR ++V W+A+I G+ + +EA+ LFR MQ+ +
Sbjct: 1185 YADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK 1244
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+K + + ++L+ CA+L AL G+ IHG++ + + + +V LI MY K G ++
Sbjct: 1245 VKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGN 1304
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F ++ KD SW +++ G ++G A+ F QMI G +PD +TF+ VLSACSH G
Sbjct: 1305 LVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAG 1364
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LV EGR F+ M + ++++P++EHY C++DLLGRAGLL EA ++++ +P E N + +
Sbjct: 1365 LVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACV---W 1421
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
GALL++CR++ N ++ E+ A+ + + S+ + + LL+NIYA++ RWED VR K
Sbjct: 1422 GALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTK 1481
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
G++K PG S I++ ++ F G+ H+E++E+Y +L
Sbjct: 1482 GLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRIL 1518
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/515 (36%), Positives = 310/515 (60%), Gaps = 13/515 (2%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+VH + V+ L +Y+ I+ + G++ + ++F ++ + ++ N I + +
Sbjct: 31 RVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQVREPNLHLHNAMIKAYAQNH 90
Query: 169 RFEDAVDVFRRMRQ-------GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-L 220
R DA+ V+ RM + C D T L AC L L+LGK++H ++ +
Sbjct: 91 RHLDAITVYIRMLRRRPFPWISCT-GGDRFTYPFLLKACGGLMALDLGKQVHGHVVRSGC 149
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
E I+ N+L++MY + G L AR++FD M ++V+ W +++S + GQ+ KAR +F+
Sbjct: 150 ESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISAHARLGQMRKARAVFNS 209
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P + +V WTA+++GY F AV FR MQ+ +PD +VA+L CAQLGALE G
Sbjct: 210 MPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAVLPACAQLGALELG 269
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+WI+ Y N +++ + V AL+EMYAKCG I++AL++F + EKD SW++++ GLA +
Sbjct: 270 RWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKDVISWSTMVGGLAAH 329
Query: 401 GKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
G+ +A++LF++M G KP+ ITF+G+LSACSH GL+DEG +F+ M +VY I+P +E
Sbjct: 330 GRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVE 389
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGC++DLL R+G + +LI +P + I +G++L+ACR +G+VD A L
Sbjct: 390 HYGCIVDLLCRSGQIQRTLDLISDMPLPADAKI---WGSVLNACRSHGDVDTAVLAAERL 446
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+E +D +LAN+YA+A RW +V N R+ ++ +RK PGCS IE++ ++ EF+ G
Sbjct: 447 VALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPGCSLIEVDNVVQEFVAG 506
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDNLV 614
+ E + +LD +A L D N ++ LV
Sbjct: 507 EDLKPEFGGLSGVLDILASQLADDDANFIDSICLV 541
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 224/463 (48%), Gaps = 80/463 (17%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L ++ A ++ L Q+ +++ C +HG + +A ++F ++ P L +N +IKA+
Sbjct: 29 LLRVHAHAVRLSLSQSSYLATQIVHLCN--AHGRVAHATRVFSQVREPNLHLHNAMIKAY 86
Query: 64 AKKGSFRKSLLLFSKLRERGVSP-------DNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
A+ ++ ++ ++ R P D FTYPF+ KA G L + G++VHG+VV+
Sbjct: 87 AQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALDLGKQVHGHVVR 146
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR----- 169
+G E + V NS+++MY G + +K+FD M ++DVVSWN IS H + MR
Sbjct: 147 SGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISAHARLGQMRKARAV 206
Query: 170 ------------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
F AV+ FR M Q PD+ ++V+ L AC L
Sbjct: 207 FNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLM-QMEGFEPDDVSIVAVLPACAQLGA 265
Query: 206 LELGKEIHRYIN--QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
LELG+ I+ Y N Q L T + NAL++MY KCGC+ +A +LF+ M K+VI W++MV
Sbjct: 266 LELGRWIYAYCNRHQMLRETYVC-NALVEMYAKCGCIDQALQLFNGMAEKDVISWSTMVG 324
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKF 322
G G R EAV LF EM+ +KP+
Sbjct: 325 GLAAHG-------------------------------RAQEAVQLFTEMERQGTVKPNGI 353
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYE 381
V LL+ C+ G L++G +N+ V ++++ + G I++ L++ +
Sbjct: 354 TFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISD 413
Query: 382 LR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ DA W S++ +G ++ A+ ++++ +P+D+
Sbjct: 414 MPLPADAKIWGSVLNACRSHGDVDTAVLAAERLVA--LEPEDV 454
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 357/637 (56%), Gaps = 55/637 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC---LLAYNLLIK 61
+QI +QI G ++ + V + G + A+++F C LL +N +++
Sbjct: 51 QQIHSQIIVTGSHRSAFLAAR--VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILR 108
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A G ++L ++ ++R+ GVS D FT+P V +A +G K VHG+VV+ G ++
Sbjct: 109 ANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQW 168
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG------------------ 163
+ +V N +M MYG +G++ + +K+F+ M + VSWN +SG
Sbjct: 169 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 228
Query: 164 -----------------HVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKN 205
H +C + + +++F RMR +G + VV LS L
Sbjct: 229 SAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVV--LSVSVDLAA 286
Query: 206 LELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+ GK IH Y+ + E + N+L+ +Y K G ++ AR LF E+ KN++ W +++S
Sbjct: 287 FDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISS 346
Query: 265 YVNCGQLEKARDLF------DRSP-VR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
Y + G ++A +F D P VR ++V W+A+I G+ + +EA+ LFR MQ+ +
Sbjct: 347 YADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK 406
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+K + + ++L+ CA+L AL G+ IHG++ + + + +V LI MY K G ++
Sbjct: 407 VKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGN 466
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F ++ KD SW +++ G ++G A+ F QMI G +PD +TF+ VLSACSH G
Sbjct: 467 LVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAG 526
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LV EGR F+ M + ++++P++EHY C++DLLGRAGLL EA ++++ +P E N + +
Sbjct: 527 LVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACV---W 583
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
GALL++CR++ N ++ E+ A+ + + S+ + + LL+NIYA++ RWED VR K
Sbjct: 584 GALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTK 643
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
G++K PG S I++ ++ F G+ H+E++E+Y +L
Sbjct: 644 GLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRIL 680
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 203/450 (45%), Gaps = 49/450 (10%)
Query: 86 PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL 145
P+N F + + +++H ++ TG ++ ++ +Y G + + +++
Sbjct: 29 PNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRV 88
Query: 146 FDEMPDK---DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
F+ P + +++ WN + +V E+A++++ RMR+ + D T + AC
Sbjct: 89 FEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRK-LGVSADGFTFPLVIRACAL 147
Query: 203 LKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+ + +L + +H + + ++ +GN L+ MY K G + +AR++F+ M ++ + W +M
Sbjct: 148 MGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTM 207
Query: 262 VSGYV---NC-GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
VSGY +C G E R + ++V WT++++ + + + E + LF M++ +
Sbjct: 208 VSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGI 267
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGY-------------------------INENRI 352
L +L+ L A ++GK IHGY +N RI
Sbjct: 268 GATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARI 327
Query: 353 ------TVDAVVATALIEMYAKCGLIEKALEIFYELREKD--------AASWTSIICGLA 398
T + V ALI YA G ++A IF +L + D SW+++I G A
Sbjct: 328 LFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA 387
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
G+ +ALELF +M K + +T VLS C+ + GR + L
Sbjct: 388 SKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNIL 447
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
G LI++ ++G E + KI N++
Sbjct: 448 VGNG-LINMYTKSGSFKEGNLVFEKIENKD 476
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 317/559 (56%), Gaps = 70/559 (12%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L+ I AQ+ + GL L+KL+ FC P L YA +F +IQ P LL +N +
Sbjct: 1 SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ A +L L+ + G+ P+ +T+PF+ K+ ++G+++HG+V+K G +
Sbjct: 61 RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120
Query: 121 FDTYVCNSIMDMY-------------------------------GVLGKICNVKKLFDEM 149
D YV S++ MY G I N +KLFDE+
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEI 180
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P KDVVSWN ISG+ + +++A+++F+ M + N+ PDE T+V+ +SAC ++ELG
Sbjct: 181 PVKDVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIELG 239
Query: 210 KEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+++H +I+ + + + NAL+D+Y KCG
Sbjct: 240 RQVHLWIDDHGFGSNLKIVNALIDLYSKCG------------------------------ 269
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
++E A LF+ +D++ W +I GY N + EA+ LF+EM P+ ++++L
Sbjct: 270 -EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSIL 328
Query: 329 TGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
CA LGA++ G+WIH YIN+ +T + + T+LI+MYAKCG IE A ++F + +
Sbjct: 329 PACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRS 388
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+SW ++I G AM+GK N A +LFS+M G PDDITF+G+LSACSH G++D GR F
Sbjct: 389 LSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFR 448
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+M++ Y+I PKLEHYGC+IDLLG GL EA+E+IR +P E + +I + +LL AC+++
Sbjct: 449 SMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVI---WCSLLKACKMH 505
Query: 507 GNVDMGEKLAALLEKIESK 525
NV++GE A L KIE +
Sbjct: 506 NNVELGESYAQNLIKIEPE 524
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 228/439 (51%), Gaps = 26/439 (5%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP----------DKDVVSWNV 159
+H ++KTGL Y + +++ C + FD +P + +++ WN
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIE-------FCVLSPHFDGLPYAISVFETIQEPNLLIWNT 58
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ- 218
GH A+ ++ M L+P+ T L +C K G++IH ++ +
Sbjct: 59 MFRGHALSSDPVSALYLYVCMIS-LGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKL 117
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
+ + +L+ MY + G L +AR++FD+ +++V+ +T+++ GY + G +E A+ LF
Sbjct: 118 GYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLF 177
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
D PV+D+V W AMI+GY + + EA+ LF++M ++PD+ +V +++ CAQ G++E
Sbjct: 178 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 237
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ +H +I+++ + + ALI++Y+KCG +E A +F L KD SW ++I G
Sbjct: 238 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYT 297
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ-IQPK 457
+AL LF +M+ G P+D+T + +L AC+H G +D GR + + + +
Sbjct: 298 HMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNA 357
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
LID+ + G ++ A+++ + + + + A++ ++G + L +
Sbjct: 358 SSLLTSLIDMYAKCGDIEAAKQVFDSMLTRS----LSSWNAMIFGFAMHGKANAAFDLFS 413
Query: 518 LLEK--IESKDSSFHTLLA 534
+ K I+ D +F LL+
Sbjct: 414 KMRKNGIDPDDITFVGLLS 432
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 164/401 (40%), Gaps = 86/401 (21%)
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
L A +F+ ++++W M G+ + A+ L+ M + L P+ + LL
Sbjct: 38 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKS 97
Query: 331 CAQLGALEQGKWIHG-----------YINENRITV--------------------DAVVA 359
CA+ A +G+ IHG Y++ + I++ D V
Sbjct: 98 CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 157
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TALI+ YA G IE A ++F E+ KD SW ++I G A G +ALELF M+ +
Sbjct: 158 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 217
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA-- 477
PD+ T + V+SAC+ G ++ GR+ + + + L+ LIDL + G ++ A
Sbjct: 218 PDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGEVETACG 276
Query: 478 ---------------------------------EELIRKIPNENNEIIVPLYGALLSACR 504
+E++R + N+ ++ ++L AC
Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTML----SILPACA 332
Query: 505 IYGNVDMGEKLAALLEKI---ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
G +D+G + + K + SS T L ++YA D+ +Q M R +
Sbjct: 333 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCG---DIEAAKQVFDSMLTRSL 389
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
+++ + G H + + + +M K +D
Sbjct: 390 SSWNAM---------IFGFAMHGKANAAFDLFSKMRKNGID 421
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 327/594 (55%), Gaps = 56/594 (9%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAY----------NLLIKAFA 64
L+ NP K + C+ + LY + + G + + + + N +IKA+
Sbjct: 5 ALETNPNLFTKFIATCSSIALLAPLY-DPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYV 63
Query: 65 KKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ +S L+ LR +PD+FT+ + K+ + +G+++H +VV G D
Sbjct: 64 GMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDL 123
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
Y +++DMY GK+ +KLFDEM D+ VSW I G+V+ ++A +F
Sbjct: 124 YAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLF------ 177
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+Q +E N ++D Y K G + A
Sbjct: 178 ---------------------------------DQMIEKDSAAFNTMIDAYVKLGDMCSA 204
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R+LFDEMP ++V+ WT M+ GY + G L+ AR LFD P +++ W AMI+GY Q +
Sbjct: 205 RKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPY 264
Query: 304 EAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ LF EMQ L+PD+ +V++L A LGAL+ G W+H ++ ++ V TAL
Sbjct: 265 EALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTAL 324
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MYAKCG I K+ +F + EK+ ASW ++I A+NG+ +AL LF +M G P++
Sbjct: 325 IDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNE 384
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
IT IGVLSAC+H GLV+EG+R+F M E + + PK+EHYGC++DLLGRAG L EAE+L+
Sbjct: 385 ITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLME 443
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P E N II+ + L AC +V E++ K+E+ + + +L N+YA+ R
Sbjct: 444 SMPYEANGIIL---SSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKR 500
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
W++ V+ M+ GV+K GCS+IE++ + EF+ GD H + + I+S+L ++
Sbjct: 501 WKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVLGQL 554
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/528 (36%), Positives = 313/528 (59%), Gaps = 12/528 (2%)
Query: 80 RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF--DTYVCNSIMDMYGVLG 137
R +S + Y F+ ++ + GE++H ++ TG+ +T++ N+++ Y G
Sbjct: 5 RHTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCG 64
Query: 138 KICNVKKLFDEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
+K+FDE+P KD V W + V+ ++A+ +F MR+ C + PDE T+V
Sbjct: 65 CAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRR-CGVKPDEVTLVC 123
Query: 196 TLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
C L ++ +G + H + L NA++DMY K G + EAR +F EM ++
Sbjct: 124 LFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQS 183
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
V+ WT ++ G + + R +FD P R+ V WT MI GY+ E+ AL REM
Sbjct: 184 VVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIF 243
Query: 315 -IRLKPDKFILVALLTGCAQLGALEQGKWIHGY-INENRITVDAVVATALIEMYAKCGLI 372
+ ++ + L ++LT C+Q G L G+W+H Y + ++ +V TA+++MYAKCG I
Sbjct: 244 DLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRI 303
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
A + F ++ +++ SW +++ GLAM+G AL++F QM AKPDD+TF VLSAC
Sbjct: 304 HIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKE-AKPDDVTFTSVLSAC 362
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SH GLVD+G +F + VY I PK+EHY C++DLLGRAG L+EAE L+R++P NE++
Sbjct: 363 SHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVV 422
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+ G+LL +C I+G + +GE L L +++ +++ +H LL+N+YA A + ++RQ
Sbjct: 423 L---GSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQV 479
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+K+ G++KVPG SSI + G +H+F GD SH +E+Y+MLD M L
Sbjct: 480 LKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRL 527
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 203/449 (45%), Gaps = 73/449 (16%)
Query: 5 KQIQAQIFQIGLQQNPETL--NKLMVFCTHPSHGNLLYAEKIFGSIQSPC--LLAYNLLI 60
+++ A I G+ PET N L+ F + S G A K+F I + + L+
Sbjct: 33 ERLHATIITTGIAGAPETFLHNALLQF--YASCGCAWQARKVFDEIPHSHKDTVDWTTLM 90
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F + ++LL+F ++R GV PD T +F LG+V G + HG +VK GL
Sbjct: 91 GCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLG 150
Query: 121 FDTYVCNSIMDMY---GVLGK----------------------------ICNVKKLFDEM 149
CN++MDMY G++G+ + N + +FDEM
Sbjct: 151 GVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEM 210
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P+++ V+W + I+G++ +++ + R M + + T+ S L+AC+ +L +G
Sbjct: 211 PERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMG 270
Query: 210 KEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
+ +H Y +E E ++G A++DMY KCG + A + F +MP +NV+ W +M+SG
Sbjct: 271 RWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAM 330
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G A D+F + +F+E KPD ++
Sbjct: 331 HGLGRAALDIFPQ---------------------------MFKEA-----KPDDVTFTSV 358
Query: 328 LTGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EK 385
L+ C+ G ++QG + G + IT ++++ + G +E+A + E+
Sbjct: 359 LSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRP 418
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMI 414
+ S++ +++GK+ L +++
Sbjct: 419 NEVVLGSLLGSCSIHGKLQLGEHLLQELV 447
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 357/637 (56%), Gaps = 55/637 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC---LLAYNLLIK 61
+QI +QI G ++ + V + G + A+++F C LL +N +++
Sbjct: 51 QQIHSQIIVTGSHRSAFLAAR--VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILR 108
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A G ++L ++ ++R+ GVS D FT+P V +A +G K VHG+VV+ G ++
Sbjct: 109 ANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQW 168
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG------------------ 163
+ +V N +M MYG +G++ + +K+F+ M + VSWN +SG
Sbjct: 169 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 228
Query: 164 -----------------HVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKN 205
H +C + + +++F RMR +G + VV LS L
Sbjct: 229 SAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVV--LSVSVDLAA 286
Query: 206 LELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+ GK IH Y+ + E + N+L+ +Y K G ++ AR LF E+ KN++ W +++S
Sbjct: 287 FDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISS 346
Query: 265 YVNCGQLEKARDLF------DRSP-VR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
Y + G ++A +F D P VR ++V W+A+I G+ + +EA+ LFR MQ+ +
Sbjct: 347 YADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK 406
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+K + + ++L+ CA+L AL G+ IHG++ + + + +V LI MY K G ++
Sbjct: 407 VKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGN 466
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F ++ KD SW +++ G ++G A+ F QMI G +PD +TF+ VLSACSH G
Sbjct: 467 LVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAG 526
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LV EGR F+ M + ++++P++EHY C++DLLGRAGLL EA ++++ +P E N + +
Sbjct: 527 LVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACV---W 583
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
GALL++CR++ N ++ E+ A+ + + S+ + + LL+NIYA++ RWED VR K
Sbjct: 584 GALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTK 643
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
G++K PG S I++ ++ F G+ H+E++E+Y +L
Sbjct: 644 GLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRIL 680
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/512 (41%), Positives = 305/512 (59%), Gaps = 21/512 (4%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYV-------CNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+K ++ H V TGLE +T+ C+S + L C V F+++ + V
Sbjct: 17 SMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRV---FEQIQNPTVC 73
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+N I + +F+ A+ VF +M Q L PD T+ L AC + GK IH Y
Sbjct: 74 IYNTLIKAFLVNNKFKSALQVFVKMLQS-ELKPDNYTIPYVLKACGTFHDCSFGKMIHGY 132
Query: 216 INQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
++ L F +GN+L+ MYC G + AR +FDE+P+ NV+ W+ M+SGY G ++ A
Sbjct: 133 SSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSA 192
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
R FD +P +D +W AMI+GYVQ + F E++ LFR MQ+ + PD+ I V++L+ CA L
Sbjct: 193 RLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHL 252
Query: 335 GALEQGKWIHGYINENRITVDAV-VATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
GALE G WIH ++N+ ++ +V ++T+L++MYAKCG +E A +F + +D W ++
Sbjct: 253 GALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAM 312
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I G+AM+G AL+LF M G KPDDITFI V +ACS+ G+ EG + M VY
Sbjct: 313 ISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYN 372
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL-YGALLSACRIYGNVDMG 512
I PK EHYGCL+DLL RAGL +EA +IRKI N N L + A LSAC +G +
Sbjct: 373 IVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLA 432
Query: 513 EKLAALLEKIESKDSSFHT----LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
E LAA EK+ D+ H+ LL+N+YA++ + D VR MK G K PGCSS+E
Sbjct: 433 E-LAA--EKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVE 489
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
I+G+I EF+ G+ +H +M+EI+S+L +M L
Sbjct: 490 IDGVISEFIAGEKTHPQMEEIHSVLKKMHMQL 521
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 228/465 (49%), Gaps = 82/465 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGN--LLYAEKIFGSIQSPCLLAYNL 58
M LKQ AQ+F GL+ N L++++ FC+ H + L YA ++F IQ+P + YN
Sbjct: 18 MKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQNPTVCIYNT 77
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
LIKAF F+ +L +F K+ + + PDN+T P+V KA G + G+ +HGY K G
Sbjct: 78 LIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLG 137
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR--------- 169
L FD YV NS+M MY V G + + +FDE+P +VVSW+V ISG+ K
Sbjct: 138 LVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFD 197
Query: 170 ----------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
F++++ +FR M Q +++PDE VS LSAC L LE
Sbjct: 198 EAPEKDKGIWGAMISGYVQNSCFKESLYLFRLM-QLTDIVPDESIFVSILSACAHLGALE 256
Query: 208 LGKEIHRYINQELEFTPI---MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+G IH+++NQ L+ P+ + +LLDMY KCG L A+ LFD M ++V+CW +M+SG
Sbjct: 257 IGVWIHQHLNQ-LKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISG 315
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
G + A+ LF +M+ + +KPD
Sbjct: 316 MAMHGDGKG-------------------------------ALKLFYDMEKVGVKPDDITF 344
Query: 325 VALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+A+ T C+ G +G + + I + L+++ ++ GL E+A+ + ++
Sbjct: 345 IAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKIT 404
Query: 384 -----EKDAASWTSIICGLAMNGKIN-------KALELFSQMISG 416
++ +W + + +G+ K L+L + + SG
Sbjct: 405 NSWNGSEETLAWRAFLSACCNHGETQLAELAAEKVLQLDNHIHSG 449
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/672 (31%), Positives = 352/672 (52%), Gaps = 79/672 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L QI I + G KL+ +FC S + A ++F ++ + Y+ +
Sbjct: 57 LKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNS---ITEAARVFEPVEHKLDVLYHTM 113
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+K +AK + R ++ + ++R V P + + ++ + G ++++G ++HG V+ G
Sbjct: 114 LKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGF 173
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ + + +++++Y +I + K+F+ MP +D+VSWN ++G+ + AV V +
Sbjct: 174 QSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQ 233
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG 238
M++ PD T+VS L A LK L +G+ IH Y E+ + A+LD Y KCG
Sbjct: 234 MQEAGQ-KPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCG 292
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGY--------------------------------- 265
+ AR +F M ++NV+ W +M+ GY
Sbjct: 293 SVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALH 352
Query: 266 --VNCGQLEKAR---DLFDRSPVR-DIVLWTAMINGYVQFNRFDEAVA------------ 307
N G LE+ R L D + D+ + ++I+ Y + R D A +
Sbjct: 353 ACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVT 412
Query: 308 -------------------LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
LF EMQ +KPD F LV+++T A L Q KWIHG
Sbjct: 413 WNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAI 472
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + V TALI+ +AKCG I+ A ++F ++E+ +W ++I G NG +AL+
Sbjct: 473 RTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALD 532
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF++M +G KP++ITF+ V++ACSH GLV+EG +F +M E Y ++P ++HYG ++DLL
Sbjct: 533 LFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLL 592
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG LD+A + I+ +P + + + GA+L ACRI+ NV++GEK A L ++ D
Sbjct: 593 GRAGRLDDAWKFIQDMPVKPG---ITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGG 649
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+H LLAN+YASA+ W+ V VR M++ G++K PGCS +E+ +H F G +H + K
Sbjct: 650 YHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKR 709
Query: 589 IYSMLDRMAKTL 600
IY+ L+ + +
Sbjct: 710 IYAYLETLGDEM 721
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/630 (33%), Positives = 340/630 (53%), Gaps = 79/630 (12%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAE-KIFGSIQSPCLLAYNLLI 60
+Q +Q+ AQ+ + L ++ SH NLL+ ++F +I P LA+ +I
Sbjct: 23 SQAQQLHAQVLKFQASSLCNLSLLLSIY----SHINLLHDSLRLFNTIHFPPALAWKSVI 78
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + G +SL F + G+ PD+ +P V K+ L ++ GE +HGY+++ GL+
Sbjct: 79 RCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLD 138
Query: 121 FDTYVCNSIMDMYGVL-------------GKICN-------------------VKKLFDE 148
FD Y N++M+MY L G++ + V+K+F+
Sbjct: 139 FDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEM 198
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP+KD+VSWN I+G+ + +E+ + + R M G NL PD T+ S L ++
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREM-GGANLKPDSFTLSSVLPLIAENVDISR 257
Query: 209 GKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
GKEIH I Q L+ + ++L+DMY KC ++++ +F +
Sbjct: 258 GKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTE--------------- 302
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
RD + W ++I G VQ FDE + FR+M + ++KP + ++
Sbjct: 303 ----------------RDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
+ CA L L GK +HGYI N + +A++L++MYAKCG I A +IF +R +D
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SWT++I G A++G+ A+ELF QM + G KP+ + F+ VL+ACSHGGLVDE ++FN+
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNS 466
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACR 504
MT + I P +EHY + DLLGRAG L+EA + I + I P ++ LLSACR
Sbjct: 467 MTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH------IGPTGSIWATLLSACR 520
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGC 564
++ N+DM EK+A + +++ ++ + LLANIY++A RW++ R M+ +G+RK P C
Sbjct: 521 VHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPAC 580
Query: 565 SSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
S IE+ ++ F+ GD SH ++I ++
Sbjct: 581 SWIEVKNKVYAFMAGDESHPCYEKIREAME 610
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/547 (35%), Positives = 317/547 (57%), Gaps = 37/547 (6%)
Query: 50 SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEK 109
+P +YN+ ++ FA R +L LF ++ + PD +T PF+ A E
Sbjct: 79 APTAFSYNVTLRFFASTRP-RTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARS 137
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
H + + GL+ + +S++ MY LG +++FD +P +DVVSWN + + +
Sbjct: 138 AHALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGM 197
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGN 228
D +FR M + P+E TV L+AC +L LG+ + ++ + E+E ++G+
Sbjct: 198 AADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGS 257
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
AL+ MY KCG ++EAR +FD + +K+V+ W +M++GY G +
Sbjct: 258 ALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSK---------------- 301
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
EA+ALF M+ PDK LV +L+ CA +GALE G + Y +
Sbjct: 302 ---------------EAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYAS 346
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + V TAL++MY+KCG ++KA+++F +L K+ A+W ++ICGLA NG+ ++A+
Sbjct: 347 HRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGHEAIR 406
Query: 409 LFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
F M + G +PDDITFIGVLSAC H GL+ +GRR+FN++T +QI PK+EHY C++DL
Sbjct: 407 QFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDL 466
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
L RAG L+EA + + KIP + + +++ GALL+ACR NV++ E++ + ++E +S
Sbjct: 467 LARAGHLEEAWDFVEKIPGKADAVML---GALLAACRKCKNVEVSERVINRIMQLEPSNS 523
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ + + IYAS++R +D +R M+E GV K+PGCS +E++G + EF GD S
Sbjct: 524 WNYVVSSKIYASSDRLDDSAKMRGLMRERGVSKIPGCSWVEVSGKVLEFYAGDESQHGAD 583
Query: 588 EIYSMLD 594
++Y + D
Sbjct: 584 DMYQLHD 590
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 190/382 (49%), Gaps = 46/382 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ A + ++GLQ + T++ L+ + + G+ L A ++F I ++++N ++KA+
Sbjct: 136 RSAHALLCRLGLQAHDHTVHSLVTM--YSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYE 193
Query: 65 KKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G +F + + G V+P+ T V A G++ G + +V +E +
Sbjct: 194 RAGMAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGS 253
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V ++++ MY G++ +++FD + KDVV+WN I+G+ + ++A+ +F MRQ
Sbjct: 254 LVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQE 313
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSE 242
PD+ T+V LSAC A+ LELG E+ Y + + + +G AL+DMY KCG L +
Sbjct: 314 -GASPDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDK 372
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN-R 301
A ++F ++P KN W +++ G + FN R
Sbjct: 373 AVQVFGKLPCKNEATWNALICG--------------------------------LAFNGR 400
Query: 302 FDEAVALFREMQIIR----LKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDA 356
EA+ R+ +++R L+PD + +L+ C G L+ G +W + +E +I
Sbjct: 401 GHEAI---RQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKI 457
Query: 357 VVATALIEMYAKCGLIEKALEI 378
+ ++++ A+ G +E+A +
Sbjct: 458 EHYSCMVDLLARAGHLEEAWDF 479
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 140/294 (47%), Gaps = 15/294 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F I ++A+N +I +A+ G ++++ LF +R+ G SPD T V
Sbjct: 267 GEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVL 326
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +G ++ G ++ Y GL + YV +++DMY G + ++F ++P K+
Sbjct: 327 SACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEA 386
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN I G R +A+ F MR L PD+ T + LSAC L+ G+
Sbjct: 387 TWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNS 446
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ E + P + + ++D+ + G L EA + +++P K + + ++++ C +E
Sbjct: 447 LTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCKNVE 506
Query: 273 KARDLFDR----SPVRDIVLWTAMING--YVQFNRFDEAV---ALFREMQIIRL 317
+ + +R P W +++ Y +R D++ L RE + ++
Sbjct: 507 VSERVINRIMQLEPSNS---WNYVVSSKIYASSDRLDDSAKMRGLMRERGVSKI 557
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/550 (38%), Positives = 308/550 (56%), Gaps = 49/550 (8%)
Query: 56 YNLLIKAFAKKG----SFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVK------ 105
+N LI G +FR L + R PD +T P KA LG
Sbjct: 71 FNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLR 130
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+G +VH K G V N+++ +YGV G+ + +++FDEM +DVVSW +S V
Sbjct: 131 EGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFV 190
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTP 224
+ RF +A+ + +M +++P+EGT+ L AC L GK +H Y+ +E +
Sbjct: 191 RGGRFAEALVLVGQM----DVVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKL 246
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
I+GNA+LDMY V C +L+ AR +FDR VR
Sbjct: 247 IVGNAVLDMY-------------------------------VKCEKLDLARRVFDRLLVR 275
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
D++ WT MI+G VQ +A+ +F EMQ R+KPDK +L +L+ C LGALE G+W+H
Sbjct: 276 DVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVH 335
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
YI I D V T+L++MYAKCG +E +L IF ++ K+ +SW ++I G A++G
Sbjct: 336 EYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGR 395
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+ALE F +M++ G P++++FI VL AC H GLV EG + F +M Y++ P EHYG +
Sbjct: 396 EALEHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSV 455
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAGL+ EA + + +P V +GALLSAC+ + VD +++ + ++ES
Sbjct: 456 VDLLGRAGLIHEAYSVTKAMPMRPA---VFTWGALLSACQAHRQVDFSQQILRHVHELES 512
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+S + LL+NIYA +RW DV VR M E G++K PG S IE+NG EF+VG +H
Sbjct: 513 SESGVYALLSNIYAVNHRWADVKRVRGLMSEKGLQKEPGSSVIEVNGKTSEFVVGQKNHK 572
Query: 585 EMKEIYSMLD 594
+ EI +ML
Sbjct: 573 NVDEICAMLS 582
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 188/377 (49%), Gaps = 43/377 (11%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + S ++++ L+ AF + G F ++L+L ++ V P+ T V A G
Sbjct: 167 ARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQM---DVVPNEGTLACVLVACGR 223
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
LG + G+ VHG+ ++ + V N+++DMY K+ +++FD + +DV+SW +
Sbjct: 224 LGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIM 283
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE- 219
ISG V+C A++VF M Q + PD+ + + LSACT+L LE G+ +H YI ++
Sbjct: 284 ISGLVQCKLPSKALEVFNEM-QKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKG 342
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+E+ +G +L+DMY KCGCL + +F +MP KN+ W ++++G+ G +A + FD
Sbjct: 343 IEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFD 402
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
R M L P++ + +L C G +++
Sbjct: 403 R-------------------------------MVASGLAPNEVSFIIVLGACCHSGLVQE 431
Query: 340 G-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA-SWTSIICGL 397
G + N +++ +++++ + GLI +A + + + A +W +++
Sbjct: 432 GLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGALLSAC 491
Query: 398 AMNGKINKALELFSQMI 414
+ +++ FSQ I
Sbjct: 492 QAHRQVD-----FSQQI 503
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/667 (32%), Positives = 353/667 (52%), Gaps = 78/667 (11%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTH---PSHGNLLYAEKIFGSIQSPCLLAYNL 58
+ L+Q+ AQI L + + L+ CT P H Y +F S +P + +
Sbjct: 15 SHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPH----YTHLLFNSTLNPNVFVFTS 70
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP-------------------------- 92
+++ ++ K +L+F ++ GV PD F YP
Sbjct: 71 MLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGHGSDA 130
Query: 93 FVFKAV-------GWLGEVKK---------------GEKVHGY-----------VVKTGL 119
FV AV G +G +K V GY +
Sbjct: 131 FVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP 190
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E + +++ Y + + ++ FD MP++ VVSWN +SG+ + E+ + +F
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDE 250
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
M + PDE T V+ +SAC++ + L + R ++Q +++ + ALLDMY KCG
Sbjct: 251 MVNA-GIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCG 309
Query: 239 CLSEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
+ AR +FDE+ +N + W +M+S Y G L+ AR+LF+ P R++V W +MI GY
Sbjct: 310 SIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYA 369
Query: 298 QFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q + A+ LF+EM +L PD+ +V++++ C LGALE G W+ ++ EN+I +
Sbjct: 370 QNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSI 429
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
A+I MY++CG +E A +F E+ +D S+ ++I G A +G +A+ L S M G
Sbjct: 430 SGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG 489
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G +PD +TFIGVL+ACSH GL++EGR+ F ++ + P ++HY C++DLLGR G L++
Sbjct: 490 GIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELED 544
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A+ + ++P E + +YG+LL+A RI+ V++GE A L ++E +S LL+NI
Sbjct: 545 AKRTMERMPMEPH---AGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNI 601
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YASA RW+DV +R+ MK+ GV+K G S +E G +H+F+V D SH +IY +L +
Sbjct: 602 YASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIEL 661
Query: 597 AKTLLDS 603
K + ++
Sbjct: 662 RKKMREA 668
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 319/600 (53%), Gaps = 40/600 (6%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLM--VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
LKQ+ + L + +N L+ +H Y+ +F Q P + YN LI
Sbjct: 28 HLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTH----YSFLLFSHTQFPNIFLYNTLI 83
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F F ++L LF +R+ G++ FT+P V KA K G +H VVK G
Sbjct: 84 NGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFN 143
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D S++ +Y G++ + K+F+E+P++ VV+W SG+ + +A+D+F++M
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKM 203
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ + PD +V LSAC + +L+ G+ I +++ +E+E
Sbjct: 204 VE-MGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHM-EEMEM------------------ 243
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
KN T++V+ Y CG++EKAR +FD +DIV W+ MI GY +
Sbjct: 244 -----------QKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNS 292
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
E + F +M LKPD+F +V L+ CA LGAL+ G+W I+ + + +A
Sbjct: 293 FPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MYAKCG + + E+F E++EKD + I GLA NG + + +F Q G P
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D TF+G+L C H GL+ +G RFFN ++ VY ++ +EHYGC++DL GRAG+LD+A L
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRL 472
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P N I+ +GALLS CR+ + + E + L +E ++ + L+NIY+ +
Sbjct: 473 ICDMPMRPNAIV---WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVS 529
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
RW++ VR M G++K+PG S IE+ G +HEFL D SH +IY+ L+ + +
Sbjct: 530 GRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 306/493 (62%), Gaps = 5/493 (1%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K + +H + +KT D +V ++ +Y + I + KLF + +V + I G
Sbjct: 41 KHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGF 100
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFT 223
V + DA+++F +M + +++ D V + L AC + L GKE+H + L
Sbjct: 101 VSFGSYTDAINLFCQMVRK-HVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLD 159
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ L+++Y KCG L +AR++FD MP ++V+ T M+ +CG +E+A ++F+
Sbjct: 160 RSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGT 219
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
RD V WT +I+G V+ F+ + +FREMQ+ ++P++ V +L+ CAQLGALE G+WI
Sbjct: 220 RDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWI 279
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H Y+ + + V+ VA ALI MY++CG I++A +F +R KD +++ S+I GLA++GK
Sbjct: 280 HAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKS 339
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
+A+ELFS+M+ +P+ ITF+GVL+ACSHGGLVD G F +M ++ I+P++EHYGC
Sbjct: 340 IEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGC 399
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++D+LGR G L+EA + I ++ E ++ + +LLSAC+I+ N+ MGEK+A LL +
Sbjct: 400 MVDILGRVGRLEEAFDFIGRMGVEADD---KMLCSLLSACKIHKNIGMGEKVAKLLSEHY 456
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
DS +L+N YAS RW VR+KM++ G+ K PGCSSIE+N IHEF GD H
Sbjct: 457 RIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRH 516
Query: 584 SEMKEIYSMLDRM 596
E K IY L+ +
Sbjct: 517 PERKRIYKKLEEL 529
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 246/551 (44%), Gaps = 64/551 (11%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
++ I + Q+P +L+ V+C + +A K+F Q+P + Y LI
Sbjct: 42 HVQSIHCHAIKTRTSQDPFVAFELLRVYC---KVNYIDHAIKLFRCTQNPNVYLYTSLID 98
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
F GS+ ++ LF ++ + V DN+ + KA + G++VHG V+K+GL
Sbjct: 99 GFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGL 158
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS------------------------- 156
D + ++++YG G + + +K+FD MP++DVV+
Sbjct: 159 DRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMG 218
Query: 157 ------WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
W + I G V+ F ++VFR M Q + P+E T V LSAC L LELG+
Sbjct: 219 TRDTVCWTMVIDGLVRNGEFNRGLEVFREM-QVKGVEPNEVTFVCVLSACAQLGALELGR 277
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH Y+ + +E + AL++MY +CG + EA+ LFD + K+V + SM+ G G
Sbjct: 278 WIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHG 337
Query: 270 QLEKARDLFD---RSPVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFIL 324
+ +A +LF + VR + + + ++N D +F M++I ++P+
Sbjct: 338 KSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHY 397
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI---EMYAKCGLIEKALEIFYE 381
++ ++G LE+ +I + D + +L+ +++ G+ EK ++ E
Sbjct: 398 GCMVDILGRVGRLEEA---FDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSE 454
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
D+ S+ + A G+ + A E+ +M GG + CS + +
Sbjct: 455 HYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKE--------PGCSSIEVNNAI 506
Query: 442 RRFFN---TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
FF+ E +I KLE L G L E + I +E E+ + ++
Sbjct: 507 HEFFSGDLRHPERKRIYKKLEELNYLTKF---EGYLPATEVALHDIDDEQKELALAVHSE 563
Query: 499 LLSACRIYGNV 509
L+ C YG V
Sbjct: 564 RLAIC--YGLV 572
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/589 (35%), Positives = 338/589 (57%), Gaps = 38/589 (6%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ A I+++G + N L+ + G++ A + F +I ++++ ++ +A+
Sbjct: 63 LHACIYKLGHESNAFVGTALID--AYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
F+ SL LF+++R G +P++FT+ V KA L G+ VHG V+KT E D YV
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
++D+Y G +V ++F+EMP DV+ W+ IS + + + +AV++F +MR+ +
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF-V 239
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARE 245
+P++ T S L +C +++NL+LGK++H ++ + L+ + NAL+D+Y KC
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKC-------- 291
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
G+L+ + LF P R+ V W MI GYVQ D+A
Sbjct: 292 -----------------------GRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKA 328
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
++L++ M +++ + ++L CA L A+E G IH + D VV ALI+M
Sbjct: 329 LSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDM 388
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
YAKCG I+ A +F L E+D SW ++I G +M+G + +AL+ F M P+ +TF
Sbjct: 389 YAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTF 448
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
+ +LSACS+ GL+D G+ +F +M + Y I+P +EHY C++ LLGR+G LD+A +LI +IP
Sbjct: 449 VSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIP 508
Query: 486 NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWED 545
E N V ++ ALL AC I+ +VD+G A + +I+ +D + H LL+NIYA RW
Sbjct: 509 LEPN---VKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNS 565
Query: 546 VTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
V +VR+ MK GV+K PG S IE GI+H F VGD SH +MK I ML+
Sbjct: 566 VASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLE 614
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 187/423 (44%), Gaps = 66/423 (15%)
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLE 207
MPD++ VS+ I G+V+ + ++ VD+F R+ R+G L P T + L +++ E
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTI--LKLLVSVECAE 58
Query: 208 LGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
L +H I + +G+ N T+++ Y
Sbjct: 59 LAYSLHACIYK-------LGH-----------------------ESNAFVGTALIDAYAV 88
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
CG + AR FD +D+V WT M+ Y + +RF +++ LF EM+++ P+ F +
Sbjct: 89 CGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGV 148
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L C L A GK +HG + + +D V L+++Y K G L +F E+ + D
Sbjct: 149 LKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDV 208
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
W+ +I A + + +A+ELF QM P+ TF VL +C+ + G++
Sbjct: 209 IPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCH 268
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPL-------- 495
+ +V + + L+D+ + G LD + +L ++PN N N +IV
Sbjct: 269 VLKV-GLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDK 327
Query: 496 -------------------YGALLSACRIYGNVDMGEKLAAL-LEKIESKDSSFHTLLAN 535
Y ++L AC +++G ++ +L L+ I KD L +
Sbjct: 328 ALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALID 387
Query: 536 IYA 538
+YA
Sbjct: 388 MYA 390
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 133/265 (50%), Gaps = 6/265 (2%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ + ++GL N N LM + G L + K+F + + + +N +I +
Sbjct: 263 KQVHCHVLKVGLDGNVFVSNALMD--VYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYV 320
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G K+L L+ + E V TY V +A L ++ G ++H +KT + D
Sbjct: 321 QSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVV 380
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V N+++DMY G I N + +FD + ++D +SWN ISG+ +A+ F+ M Q
Sbjct: 381 VGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMM-QET 439
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
+P++ T VS LSAC+ L++G+ + + Q+ P M + ++ + + G L +
Sbjct: 440 ECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDK 499
Query: 243 ARELFDEMP-NKNVICWTSMVSGYV 266
A +L +E+P NV W +++ V
Sbjct: 500 AVKLIEEIPLEPNVKVWRALLGACV 524
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/600 (35%), Positives = 334/600 (55%), Gaps = 38/600 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A ++F + P +++ +I + + G F ++ +F ++ V P FT V
Sbjct: 93 GRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVL 152
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD-------- 147
+ + + G KVH +VVK GL V NS+++MY G K +FD
Sbjct: 153 ASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTS 212
Query: 148 -----------------------EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+M ++DVVSWN ISG+ + +A+D+F +M
Sbjct: 213 SWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDS 272
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD+ T+ S LSAC L+NL+LGK+IH + I E + +GNAL+ MY K G + A
Sbjct: 273 SSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIA 332
Query: 244 RELFDE--MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+++ ++ + N +VI +T+++ GYV G + AR +FD VRD+V WTAMI GYVQ
Sbjct: 333 QKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGF 392
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+A+ LFR M KP+ + L +L+ + L +L+ G+ IH + V+ A
Sbjct: 393 NQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNA 452
Query: 362 LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
LI MYAK G I A +F + ++D +WTS+I LA +G +AL LF +M+ G KP
Sbjct: 453 LITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKP 512
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D IT++GVLSAC+H GLV++GR ++N M ++I P HY C+IDL GRAGLL EA
Sbjct: 513 DHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAF 572
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P E + I +G+LL++C+++ NV++ E A L IE ++S ++ LAN+Y++
Sbjct: 573 IENMPIEPDVIA---WGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSAC 629
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+WE+ N+R+ MK+ GV+K G S ++I +H F V D H + IY M+ ++ K +
Sbjct: 630 GQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEI 689
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 227/481 (47%), Gaps = 72/481 (14%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G+ +H ++K GL ++ N++M+ Y G I + ++FDEMP K V SWN+ +SG+ K
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 167 CMRFEDAVDVFRRMRQ-----------GCNLM-------------------PDEGTVVST 196
R E+A VF M + G N M P + T+ +
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 197 LSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L++C A++ L +G+++H ++ + L + N+LL+MY K G A+ +FD M K+
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI- 314
W +M+S ++ G ++ A+ F++ RD+V W AMI+GY Q EA+ +F +M +
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE- 373
KPDKF L + L+ CA L L+ GK IH +I V ALI MY+K G +E
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331
Query: 374 --------------------------------KALEIFYELREKDAASWTSIICGLAMNG 401
A IF LR +D +WT++I G NG
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A+ELF MI G KP++ T +LS S +D GR+ + T +
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNAS-SVSVS 450
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
LI + ++G +++A + I + + I + +++ A +G +GE+ L E+
Sbjct: 451 NALITMYAKSGSINDARWVFNLIHWKRDTIT---WTSMIIALAQHG---LGEEALTLFER 504
Query: 522 I 522
+
Sbjct: 505 M 505
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 176/359 (49%), Gaps = 44/359 (12%)
Query: 194 VSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
S L K+ GK IH R I L + N L++ Y K G + +A +FDEMP
Sbjct: 17 TSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPV 76
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+V W ++SGY G+LE+A +F+ P D V WTAMI GY Q +F+ A+ +FREM
Sbjct: 77 KSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREM 136
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK---- 368
+ P +F L +L CA + L G+ +H ++ ++ ++ VA +L+ MYAK
Sbjct: 137 VSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDP 196
Query: 369 ---------------------------CGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
GL++ A F ++ E+D SW ++I G +G
Sbjct: 197 VTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHG 256
Query: 402 KINKALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
+AL++FS+M+ +KPD T LSAC++ + G++ + I+ + +
Sbjct: 257 FDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQI-----HAHIIRTEFDT 311
Query: 461 YG----CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
+G LI + ++G ++ A+++I + N ++I + ALL G+++ ++
Sbjct: 312 FGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIA--FTALLDGYVKLGDINPARRI 368
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/541 (36%), Positives = 320/541 (59%), Gaps = 47/541 (8%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGV---LGKICNVKKLFD--EMPDKDVVSWNVSISG 163
++H ++KT L + Y ++ + LG + +KLFD ++P ++ + I
Sbjct: 49 QLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDTVDIP-RNSFMYTTMIKA 107
Query: 164 HVKCMRFEDAVDVFRRMRQGCN---LMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
+ +A + RM C+ + P++ T SAC+ + GK+ H + I
Sbjct: 108 YANFGNPREAFAFYSRML--CDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKFP 165
Query: 220 LEFTPIMGNALLDMY--------------------------------CKCGCLSEARELF 247
EF N+LLD Y K G L EAR LF
Sbjct: 166 FEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLF 225
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
DEMP ++V+ WT M+ GY + G L +A LFD P R++V W+A+I GY+Q + +A+
Sbjct: 226 DEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALE 285
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
LF+EMQ+ ++K D+ I+ LL+ CA+LGAL+QG+W+H YI+++ I VDA ++TALI+MY+
Sbjct: 286 LFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYS 345
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG I+ A ++F E +K W+S+I GLAM+ KA+ELF++MI G +P +IT+I
Sbjct: 346 KCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYIN 405
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
+L+AC+H GLVD G + FN M E + +P+++HYGC++DLLGRAGLL +A ++ +P +
Sbjct: 406 ILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVK 465
Query: 488 NNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVT 547
+ I + ALLSAC+++ NV++GE++ +L K+E ++ + L +N+YA+ NRW+
Sbjct: 466 ADPAI---WRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISG 522
Query: 548 NVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNA 607
+R++MK G++K PGCSSIE+NG +HEF+ D SH + + IY +L + ++
Sbjct: 523 KLRREMKVRGMQKNPGCSSIELNGAVHEFVSRDHSHPQSQVIYELLHILTNHMVQEDHEP 582
Query: 608 M 608
M
Sbjct: 583 M 583
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 211/481 (43%), Gaps = 108/481 (22%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMV-FCTHPSHGNLLYAEKIFGSIQSP-CLLAYNLLIK 61
L Q+ + + L + +L++ F + + G+L YA+K+F ++ P Y +IK
Sbjct: 47 LIQLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDTVDIPRNSFMYTTMIK 106
Query: 62 AFAKKGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
A+A G+ R++ +S++ +R V P++FT+ +VF A V +G++ H ++K
Sbjct: 107 AYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPF 166
Query: 120 EFDTYVCNSIMDMYGVLGKICNV--------------------------------KKLFD 147
EF + NS++D YG +G++ V ++LFD
Sbjct: 167 EFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLFD 226
Query: 148 EMPDKDVVSWNVS-------------------------------ISGHVKCMRFEDAVDV 176
EMP++DVVSW + I G+++ + A+++
Sbjct: 227 EMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALEL 286
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYC 235
F+ M Q + DE V + LSAC L L+ G+ +H YI++ ++ + AL+DMY
Sbjct: 287 FKEM-QVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYS 345
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG + A ++F E +K V W+SM+ G
Sbjct: 346 KCGRIDMAWKVFQETGDKKVFVWSSMIGG------------------------------- 374
Query: 296 YVQFNRFDE-AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
+ + F E A+ LF +M ++P + + +L C G ++ G I + EN+
Sbjct: 375 -LAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPK 433
Query: 355 DAVVATA-LIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQ 412
+ ++++ + GL+ A + + K D A W +++ K+++ +EL Q
Sbjct: 434 PRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSAC----KLHRNVELGEQ 489
Query: 413 M 413
+
Sbjct: 490 V 490
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 15/289 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +F + L++++ LIK + + G + K+L LF +++ V D +
Sbjct: 247 GFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLL 306
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + +G +H Y+ K G++ D ++ +++DMY G+I K+F E DK V
Sbjct: 307 SACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVF 366
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
W+ I G E A+++F +M + C + P E T ++ L+ACT +++G +I
Sbjct: 367 VWSSMIGGLAMHSFGEKAIELFAKMIE-CGIEPSEITYINILAACTHSGLVDVGLQIFNR 425
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG-----YVN 267
+ + + P M + ++D+ + G L +A + + MP K + W +++S V
Sbjct: 426 MVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVE 485
Query: 268 CGQLEKARDLFDRSPVRDI--VLWTAMINGYVQFNRFDEAVALFREMQI 314
G+ + R L P D+ VL++ N Y NR+D + L REM++
Sbjct: 486 LGE-QVGRILIKMEPQNDMNYVLFS---NVYAAVNRWDISGKLRREMKV 530
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/567 (35%), Positives = 322/567 (56%), Gaps = 36/567 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F I++P ++A++ +I ++G +++ LF +R +G P+ FT +
Sbjct: 100 GTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLV 159
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+G+++ G+ +HG + K G E D V N ++ MY + + K+F+ M + D+V
Sbjct: 160 STATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLV 219
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN +SG +F +M P+ T +S L +C++L + E GK++H +
Sbjct: 220 SWNALLSGFYDSQTCGRGPRIFYQMLLE-GFKPNMFTFISVLRSCSSLLDPEFGKQVHAH 278
Query: 216 I-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I + +G AL+DMY K CL E A
Sbjct: 279 IIKNSSDDDDFVGTALVDMYAKARCL-------------------------------EDA 307
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
FDR RDI WT +I+GY Q ++ ++AV FR+MQ +KP+++ L + L+GC+ +
Sbjct: 308 GVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHM 367
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
LE G+ +H + D V +AL+++Y KCG +E A IF L +D SW +II
Sbjct: 368 ATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTII 427
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
G + +G+ KALE F M+S G PD+ TFIGVLSACS GLV+EG++ F++M+++Y I
Sbjct: 428 SGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGI 487
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
P +EHY C++D+LGRAG +E + I ++ +I + +L AC+++GNVD GEK
Sbjct: 488 NPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLI---WETVLGACKLHGNVDFGEK 544
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
A L ++E S + LL+NI+AS RW+DV N+R M G++K PGCS +E++G +H
Sbjct: 545 AAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVH 604
Query: 575 EFLVGDPSHSEMKEIYSMLDRMAKTLL 601
FL D SH +++EIY+ LD++ ++L+
Sbjct: 605 VFLSQDGSHPKIREIYAKLDKLGQSLM 631
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 253/546 (46%), Gaps = 79/546 (14%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
AE++F + +++N L+ +A+ G +K L LF K++E FT V K
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G +++G+ +H +++G E D ++ S++DMY G + + K+F ++ + DVV+W+
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE- 219
I+G + ++A ++F MR+ P++ T+ S +S T + +L G+ IH I +
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRK-GARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
E ++ N L+ MY K C+ + ++F+ M N
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNP-------------------------- 216
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
D+V W A+++G+ +F +M + KP+ F +++L C+ L E
Sbjct: 217 -----DLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEF 271
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK +H +I +N D V TAL++MYAK +E A F L +D SWT II G A
Sbjct: 272 GKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQ 331
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+ KA++ F QM G KP++ T LS CSH ++ GR +++ + K
Sbjct: 332 TDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGR-------QLHAVAVKAG 384
Query: 460 HYG------CLIDLLGRAGLLDEAEELIRKIPNEN------------------------- 488
H+G L+DL G+ G ++ AE + + + + +
Sbjct: 385 HFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFR 444
Query: 489 ---NEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF--HTLLANIYASA 540
+E I+P + +LSAC G V+ G+K + KI + S + + +I A
Sbjct: 445 MMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRA 504
Query: 541 NRWEDV 546
++ +V
Sbjct: 505 GKFNEV 510
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 140/312 (44%), Gaps = 41/312 (13%)
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+E A LF P ++ V W A++NGY Q + + LF +M+ K KF L +L G
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA G+L +GK +H + +D + +L++MY+KCG + AL++F ++R D +W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS-----------HGGL-- 437
+++I GL G +A ELF M GA+P+ T ++S + HG +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 438 ----------------------VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
V++G + F MT P L + L+ +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT-----NPDLVSWNALLSGFYDSQTCG 235
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF-HTLLA 534
+ ++ E + + + ++L +C + + G+++ A + K S D F T L
Sbjct: 236 RGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALV 295
Query: 535 NIYASANRWEDV 546
++YA A ED
Sbjct: 296 DMYAKARCLEDA 307
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/577 (34%), Positives = 330/577 (57%), Gaps = 10/577 (1%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A++ + + +KL+ F + G++ A +FG I + ++N L+ ++
Sbjct: 23 KQLHARLVLSSVVPDNFLGSKLISF--YSKSGSIRDAYNVFGKIPRKNIFSWNALLISYT 80
Query: 65 KKGSFRKSLLLFSKL---RERGVSPDNFTYPFVFKAVGWL-GEVKKGEKVHGYVVKTGLE 120
L LFS L V PD FT KA+ L ++VH ++++ GLE
Sbjct: 81 LHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLE 140
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+D +V N+++ Y ++ + +FD MP++D+VSWN ++G+ + +E ++FR M
Sbjct: 141 YDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVM 200
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
+ P+ T VS L AC +L G E+HR++N+ +++ + NA++ +Y KCG
Sbjct: 201 LSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGS 260
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L ARELF+EM K+ I + SM+SGY+ G + +A DLF + W A+I+G VQ
Sbjct: 261 LDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQN 320
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
NR + AV +FR MQ +P+ L ++L + L+ GK IHGY N + VA
Sbjct: 321 NRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVA 380
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TA+I+ YAKCG + A +F +++ + +WTSII A++G N AL LF +M++ G +
Sbjct: 381 TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQ 440
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD +TF VL+AC+H G +DE + FN + Y IQP +EHY C++ +L RAG L +A E
Sbjct: 441 PDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVE 500
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
I K+P E ++GALL+ + G+V++G+ + L +IE +++ + ++AN+Y+
Sbjct: 501 FISKMPLEPT---AKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQ 557
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+ RW+D +R MKE+ ++K+PG S IE +G + F
Sbjct: 558 SGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF 594
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 223/521 (42%), Gaps = 115/521 (22%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
AY LI+ FR L ++L V PDNF G K+ +
Sbjct: 5 AYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFL----------------GSKLISFY 48
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
K+G SI D Y V GKI P K++ SWN + + D +
Sbjct: 49 SKSG---------SIRDAYNVFGKI----------PRKNIFSWNALLISYTLHNMHTDLL 89
Query: 175 DVFRRM--RQGCNLMPDEGTVVSTLSACTAL-KNLELGKEIHRYI-NQELEFTPIMGNAL 230
+F + ++ PD TV L A +L N L KE+H +I + LE+ + NAL
Sbjct: 90 KLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNAL 149
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+ Y +C L AR +FD MP ++++ W +M++GY G EK ++LF
Sbjct: 150 ITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELF-----------R 198
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
M++ + +KP+ V++L CAQ L G +H ++NE+
Sbjct: 199 VMLSS-------------------LEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNES 239
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+I +D + A+I +YAKCG ++ A E+F E+ EKDA ++ S+I G ++G +N+A++LF
Sbjct: 240 QIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLF 299
Query: 411 SQ-------------------------------MISGGAKPDDITFIGVLSACSHGGLVD 439
+ M S G +P+ +T +L SH +
Sbjct: 300 REQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLK 359
Query: 440 EGRRFFNTMTEVYQIQPKLEH----YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
G+ Y I+ + +ID + G L A+ + +I + +
Sbjct: 360 GGKEIHG-----YAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRS----LIA 410
Query: 496 YGALLSACRIYGNVDMGEKL--AALLEKIESKDSSFHTLLA 534
+ +++SA ++G+ ++ L L I+ +F ++LA
Sbjct: 411 WTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLA 451
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/576 (34%), Positives = 322/576 (55%), Gaps = 18/576 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAK--KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
A +F +I P +YN ++ A A+ +G +L + + + +++ A
Sbjct: 102 ARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSAC 161
Query: 99 GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
+++ GE+VHG V ++ D ++ +++DMY + + +++FD MP+++VVSWN
Sbjct: 162 AAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWN 221
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-- 216
I+ + + +A+ +F M PDE T+ S +SAC L G+++H ++
Sbjct: 222 SLITCYEQNGPVGEALVLFVEM-MATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVK 280
Query: 217 NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
L ++ NAL+DMY KCG EAR +FD MP+++V+ TS+++GY +E A+
Sbjct: 281 RDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQV 340
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
+F + ++++ W +I Y Q +EA+ LF +++ + P + +L C +
Sbjct: 341 VFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAV 400
Query: 337 LEQGKWIH------GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
L+ G+ H G+ + D V +L++MY K G I+ ++F + +D SW
Sbjct: 401 LQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSW 460
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I G A NG+ AL LF +M+ PD +T IGVLSAC H GLVDEGRR F+ MTE
Sbjct: 461 NAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTE 520
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
+ I P +HY C++DLLGRAG L EAEELI+ +P E + + L+ +LL ACR++ NV+
Sbjct: 521 DHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSV---LWASLLGACRLHKNVE 577
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+GE+ A L +++ ++S + LL+N+YA +W DV VR+ MK+ GV K PGCS IEI
Sbjct: 578 LGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIG 637
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLD----RMAKTLLD 602
++ FL D H EI+S L M +T +D
Sbjct: 638 SKMNVFLARDNRHPCRNEIHSTLRIIQMEMCRTSID 673
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 219/484 (45%), Gaps = 79/484 (16%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
HG V+K+ + +T++ N+++ Y LG++ +++FD +P ++ S+N +S + + R
Sbjct: 39 AHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGR 98
Query: 170 FEDAVDVFRRM----------------RQGCNLMPD----------------EGTVVSTL 197
++A +F + R G D + S L
Sbjct: 99 PDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASAL 158
Query: 198 SACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
SAC A K+L G+++H + + + +G AL+DMY KC +AR +FD MP +NV+
Sbjct: 159 SACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVV 218
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
W S+++ Y G PV EA+ LF EM
Sbjct: 219 SWNSLITCYEQNG------------PV-------------------GEALVLFVEMMATG 247
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGY-INENRITVDAVVATALIEMYAKCGLIEKA 375
PD+ L ++++ CA L A +G+ +H + + +R+ D V+ AL++MYAKCG +A
Sbjct: 248 FFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEA 307
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
IF + + S TSI+ G A + + A +FSQM+ + + I + +++A +
Sbjct: 308 RCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMV----EKNVIAWNVLIAAYAQN 363
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE------NN 489
G +E R F + I P YG +++ G +L ++ + E
Sbjct: 364 GEEEEAIRLFVQLKR-DSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGP 422
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
E V + +L+ G++D G K + E++ ++D+ + YA R +D ++
Sbjct: 423 ESDVFVGNSLVDMYLKTGSIDDGAK---VFERMAARDNVSWNAMIVGYAQNGRAKDALHL 479
Query: 550 RQKM 553
++M
Sbjct: 480 FERM 483
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 155/305 (50%), Gaps = 17/305 (5%)
Query: 23 LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER 82
+++ + + N+ A+ +F + ++A+N+LI A+A+ G +++ LF +L+
Sbjct: 320 VSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRD 379
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF------DTYVCNSIMDMYGVL 136
+ P ++TY V A G + ++ G++ H +V+K G F D +V NS++DMY
Sbjct: 380 SIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKT 439
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVST 196
G I + K+F+ M +D VSWN I G+ + R +DA+ +F RM N PD T++
Sbjct: 440 GSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERM-LCSNENPDSVTMIGV 498
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK- 253
LSAC ++ G+ ++ ++ TP + ++D+ + G L EA EL +MP +
Sbjct: 499 LSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEP 558
Query: 254 NVICWTSMVSG-----YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+ + W S++ V G+ R LF+ P + + + N Y + ++ + +
Sbjct: 559 DSVLWASLLGACRLHKNVELGERTAGR-LFELDP-ENSGPYVLLSNMYAEMGKWADVFRV 616
Query: 309 FREMQ 313
R M+
Sbjct: 617 RRSMK 621
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 341/590 (57%), Gaps = 36/590 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER------------- 82
G + +A+K+F +P L +N +I ++K GS +K+L LF+K+ ER
Sbjct: 163 GAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILS 222
Query: 83 ------------------GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G P++ TY V A + +++ G +H +V+ D Y
Sbjct: 223 QHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVY 282
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
++DMY G++ + +++FD + + + VSW I G + E+A+ +F +MR+
Sbjct: 283 AGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMRE-V 341
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
+ D+ T+ + L C + K++ +G+++H + I + L+ + + NAL+ MY KCG + +A
Sbjct: 342 PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKA 401
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
F+ MP +++I WT+M++ + G +EKAR+ FD+ P R+++ W +M+ Y+Q ++
Sbjct: 402 NHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWE 461
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
E + ++ +M +K D ++ CA L L G I + + + VA +++
Sbjct: 462 EGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVV 521
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MY++CG IE+A ++F + K+ SW +++ G A NG+ K +E+F +M++ G PD I
Sbjct: 522 TMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQI 581
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+++ VLS CSH G V EG+ +F +MT+ + I P EH+ C++DLLGRAG L++A+ LI +
Sbjct: 582 SYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQ 641
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + N I +GALL+ACRI+GN + E L +++++ + LLANIY+ + +
Sbjct: 642 MPFKPNAAI---WGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKI 698
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+ VTNVR+ M++ GVRK PGCS IE++ +H F V D +H ++K+++ ML
Sbjct: 699 QGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 221/469 (47%), Gaps = 19/469 (4%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L + K+H ++ GL+ ++ N +++MY G I + ++F + +V SWN
Sbjct: 17 LRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTM 76
Query: 161 ISGHVKCMRFEDAVDVFRRMRQ----GCNLMPD----EGTVVSTLSACTALKNLELGKEI 212
ISG + +A +F +M + N M G + +T+ A +L L+L ++
Sbjct: 77 ISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQL 136
Query: 213 HRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H + + + + ++LDMY KCG + A+++F PN ++ CW SM+ GY G +
Sbjct: 137 HGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSV 196
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+KA +LF + P RD V W MI+ Q E + F EM +P+ ++L+ C
Sbjct: 197 KKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSAC 256
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
+ LE G +H I +D LI+MYAKCG +E A ++F L E +A SWT
Sbjct: 257 TSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWT 316
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
S+I G+A G +AL LF+QM D T VL C + G + + T
Sbjct: 317 SLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQ-LHAHTIT 375
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
+ + L+ + + G + +A +P + + + A+++A G+V
Sbjct: 376 RGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRD----IISWTAMITAFSQAGDV-- 429
Query: 512 GEKLAALLEKIESKDS-SFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
EK +K+ ++ S++++LA Y WE+ V +M GV+
Sbjct: 430 -EKAREYFDKMPERNVISWNSMLAT-YMQRGYWEEGLKVYIQMLREGVK 476
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 149/589 (25%), Positives = 247/589 (41%), Gaps = 112/589 (19%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ AQ+ +GL+ + N L+ + + G + A ++FG I P + ++N +I FA
Sbjct: 24 RKLHAQLIFMGLKSSIFLQNHLLNM--YSNCGLISDAYRVFGGIMFPNVYSWNTMISGFA 81
Query: 65 KKGSFRKSLLLFSKLRER-GVSPDNFTYPF--------VFKAVGWLGEVKKGEKVHGYVV 115
G R++ LF K+ ER VS ++ + KA G LG +K ++HG+
Sbjct: 82 DSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAE 141
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K DT V S++DMY G + +K+F P+ + WN I G+ K + A++
Sbjct: 142 KFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALE 201
Query: 176 VFRRMRQ----GCNLM--------------------------PDEGTVVSTLSACTALKN 205
+F +M + N M P+ T S LSACT++ +
Sbjct: 202 LFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYD 261
Query: 206 LELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
LE G +H R + E G L+DMY KCG L AR++FD + N + WTS++ G
Sbjct: 262 LEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGG 321
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
G E EA+ LF +M+ + + D+F L
Sbjct: 322 VAQAGFQE-------------------------------EALVLFNQMREVPVASDQFTL 350
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+L C + G+ +H + + VA AL+ MYAKCG + KA F +
Sbjct: 351 ATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPI 410
Query: 385 KDAASWTSIICGLAMNGKINKALELFS-------------------------------QM 413
+D SWT++I + G + KA E F QM
Sbjct: 411 RDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQM 470
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
+ G K D ITF +SAC+ ++ G + E + ++ + R G
Sbjct: 471 LREGVKTDWITFSTSISACADLAVLILGNQIL-AQAEKLGFSSNVSVANSVVTMYSRCGQ 529
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
++EA+++ I +N + + A+++ Y G K+ + EK+
Sbjct: 530 IEEAQKMFSSIVMKN----LVSWNAMMAG---YAQNGQGRKVIEIFEKM 571
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA L ++ + +H + + + L+ MY+ CGLI A +F + + SW
Sbjct: 14 CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSW 73
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR------F 444
++I G A +G++ +A +LF +M + D +++ ++S H G ++ + +
Sbjct: 74 NTMISGFADSGQMREAEKLFEKM----PERDSVSWNSMMSGYFHNGELEATIKASGSLGY 129
Query: 445 FNTMTEVYQIQPKLEHYG-------CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
+++ K + +G ++D+ + G +D A+++ + PN + + +
Sbjct: 130 LKLALQLHGFAEKFD-FGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPS----LFCWN 184
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDS-SFHTLLA 534
+++ YG+V +K L K+ +D+ S++T+++
Sbjct: 185 SMIYGYSKYGSV---KKALELFAKMPERDTVSWNTMIS 219
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/451 (41%), Positives = 287/451 (63%), Gaps = 8/451 (1%)
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT--ALKNLE 207
P +VSW SI+ H + + +A F RM Q + P+ T ++ LSACT L+ L
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRM-QIAGVRPNHITFLTLLSACTDFPLEGLR 108
Query: 208 LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
G IH Y+ + L+ +M G AL+DMY KCG L A +FDEM +N + W +M+ G
Sbjct: 109 FGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGC 168
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
+ G++ +A LFD+ RD + WT+MI G+V+ F++A+ FREMQ+ ++PD ++
Sbjct: 169 MRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTII 228
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L CA LGAL G WI+ ++ + + ++ +LI+MY++CG I A ++F ++ ++
Sbjct: 229 SVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR 288
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
SW S+I G A+NG +ALE F+ M G +PD ++F G L+ACSH GLVDEG +FF
Sbjct: 289 SLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFF 348
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+ M +I P++EHYGCL+DL RAG L++A +I +P + NE+++ G+LL+ACR
Sbjct: 349 DIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVL---GSLLAACRT 405
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+G+V + E+L L +++ S + LL+NIYA+ RW+ + VR+KMK +G+ K PG S
Sbjct: 406 HGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFS 465
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
SIE++G IHEF+ GD +H E + IY+MLD +
Sbjct: 466 SIEMDGSIHEFVAGDKTHVETQNIYAMLDHL 496
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 201/472 (42%), Gaps = 112/472 (23%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG--WLGEVKKGEKV 110
++++ I + G ++ FS+++ GV P++ T+ + A L ++ G +
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSI 113
Query: 111 HGYVVKTGLEFDTY-VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
H YV K GL+ + V +++DMY G++ +FDEM ++ VSWN I G CMR
Sbjct: 114 HAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDG---CMR 170
Query: 170 ----------------------------------FEDAVDVFRRMRQGCNLMPDEGTVVS 195
FE A++ FR M Q + PD T++S
Sbjct: 171 NGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREM-QLAGVEPDYVTIIS 229
Query: 196 TLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L+AC L L LG I+R++ Q+ + + N+L+DMY +CGC+ AR++F++MP ++
Sbjct: 230 VLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRS 289
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
++ W SM+ G+ +NG+ + EA+ F M+
Sbjct: 290 LVSWNSMIVGFA--------------------------LNGHAE-----EALEFFNLMRK 318
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIE 373
+PD LT C+ G +++G + R I+ L+++Y++ G +E
Sbjct: 319 EGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLE 378
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
AL ++I + M KP+++ +L+AC
Sbjct: 379 DAL---------------NVIANMPM-------------------KPNEVVLGSLLAACR 404
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLE-HYGCLIDLLGRAGLLDEAEELIRKI 484
G V R + EV P + +Y L ++ G D A ++ +K+
Sbjct: 405 THGDVGLAERLMKYLCEV---DPGSDSNYVLLSNIYAAVGRWDGASKVRKKM 453
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 148/341 (43%), Gaps = 68/341 (19%)
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ--LGAL 337
SP+ IV WT+ I + + + EA A F MQI ++P+ + LL+ C L L
Sbjct: 48 HSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGL 107
Query: 338 EQGKWIHGYINENRI-TVDAVVATALIEMYAKCGLIE----------------------- 373
G IH Y+ + + T + +V TAL++MY+KCG ++
Sbjct: 108 RFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDG 167
Query: 374 --------KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
+A+ +F ++ E+DA SWTS+I G G +ALE F +M G +PD +T
Sbjct: 168 CMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTI 227
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
I VL+AC++ G + G + N + ++ LID+ R G + A ++ ++P
Sbjct: 228 ISVLAACANLGALGLG-LWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMP 286
Query: 486 NEN----NEIIVPL---------------------------YGALLSACRIYGNVDMGEK 514
+ N +IV + L+AC G VD G +
Sbjct: 287 KRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQ 346
Query: 515 LAALLEKIE--SKDSSFHTLLANIYASANRWEDVTNVRQKM 553
++++ S + L ++Y+ A R ED NV M
Sbjct: 347 FFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANM 387
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 161/364 (44%), Gaps = 46/364 (12%)
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+++ +I F KKG F ++L F +++ GV PD T V A LG + G ++ +
Sbjct: 190 ISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWINRF 249
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
V+K + + + NS++DMY G I +++F++MP + +VSWN I G E+A
Sbjct: 250 VMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEA 309
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALL 231
++ F MR+ PD + L+AC+ ++ G + + + + +P + + L+
Sbjct: 310 LEFFNLMRKE-GFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLV 368
Query: 232 DMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLF----DRSPVRDI 286
D+Y + G L +A + MP K N + S+++ G + A L + P D
Sbjct: 369 DLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSD- 427
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQI--IRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ + N Y R+D A + ++M+ I KP ++E IH
Sbjct: 428 SNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPG-------------FSSIEMDGSIH 474
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
++ ++ V+ A+++ +F ELR ICG ++
Sbjct: 475 EFVAGDKTHVETQNIYAMLD------------HLFLELR----------ICGYVPEIEVG 512
Query: 405 KALE 408
K+ E
Sbjct: 513 KSYE 516
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/636 (33%), Positives = 340/636 (53%), Gaps = 43/636 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHP-SHGNLLYAEKIFGSIQSPCLLAYNLL 59
++Q +Q A I ++ L + + L+ F + S + + + P L +++ L
Sbjct: 16 LSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSL 75
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I AFA+ F L FS L + PD F P K+ L + G+++H + +G
Sbjct: 76 IHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGF 135
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D+ V +S+ MY +I + +KLFD MPD+DVV W+ I+G+ + E+A ++F
Sbjct: 136 LTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGE 195
Query: 180 MRQG---CNLM-------------------------------PDEGTVVSTLSACTALKN 205
MR G NL+ PD TV L A L++
Sbjct: 196 MRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLED 255
Query: 206 LELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+ +G ++H Y I Q L + +A+LDMY KCGC+ E +FDE+ + + ++G
Sbjct: 256 VVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTG 315
Query: 265 YVNCGQLEKARDLF----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
G ++ A ++F D+ ++V WT++I Q + EA+ LFR+MQ ++P+
Sbjct: 316 LSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPN 375
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+ +L+ C + AL GK IH + I D V +ALI+MYAKCG I+ A F
Sbjct: 376 AVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFD 435
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
++ + SW +++ G AM+GK + +E+F M+ G KPD +TF VLSAC+ GL +E
Sbjct: 436 KMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEE 495
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
G R +N+M+E + I+PK+EHY CL+ LL R G L+EA +I+++P E + + +GALL
Sbjct: 496 GWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACV---WGALL 552
Query: 501 SACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
S+CR++ N+ +GE A L +E + + LL+NIYAS W++ +R+ MK G+RK
Sbjct: 553 SSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRK 612
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
PG S IE+ +H L GD SH +MK+I LD++
Sbjct: 613 NPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKL 648
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/616 (34%), Positives = 346/616 (56%), Gaps = 29/616 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQS--------- 50
++ + QI A++ G +N K+++ + H L+ +A IF +
Sbjct: 28 LSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRHHAFEFDEKEEE 87
Query: 51 ----PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
P L +N +IK ++ ++++ L S + E G D FT V KA +G VK+
Sbjct: 88 EEKDPFL--WNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKE 145
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G ++HG + K D ++ N ++ Y G + ++FD MP +D VS+N I G+VK
Sbjct: 146 GMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVK 205
Query: 167 CMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTP 224
R + A VF + +P +E ++S S E G + + ++ E
Sbjct: 206 GGRIDLARVVF-------DCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDL 258
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
I N+++D KCG + +A+ LFD MPN++++ W +M+ GY G+++ AR LFD P R
Sbjct: 259 ISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPER 318
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWI 343
D+V + AM+ GYVQ EA+ +F MQ D L+ L+ AQLG +++G I
Sbjct: 319 DVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAI 378
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H +I E ++D + ALI+MY+KCG IE A+ +F ++EK W +II GLA++G
Sbjct: 379 HRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLG 438
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
A + +M +PDDITFIG+L+AC H GLV EG F M V++++PKL+HYGC
Sbjct: 439 ELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGC 498
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++D+LGRAG ++EA+ + ++P E N++I + +LLSAC+ + + ++G+ +A L +++
Sbjct: 499 MVDILGRAGHIEEAKNFVEEMPFEPNDVI---WRSLLSACKTHESFNVGQPVAENLMRLD 555
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
S S + L +N+YA +W DV VR MK+ ++K+PGCS IE+ G ++ F V D SH
Sbjct: 556 SPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSH 615
Query: 584 SEMKEIYSMLDRMAKT 599
+ IYS+LD ++ T
Sbjct: 616 PQFSGIYSILDSLSMT 631
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/636 (34%), Positives = 343/636 (53%), Gaps = 47/636 (7%)
Query: 3 QLKQIQAQIFQIG-LQQNPET---LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNL 58
Q Q+ A + G + P L+ L + P H L Y +F + ++
Sbjct: 14 QASQLHALLTTSGRIAHRPSAEHLLSSLTNTISAPRH--LRYVLSLFDRLPHSTTFLFDT 71
Query: 59 LIKA-FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGE--KVHGYVV 115
++A +LL ++R GV FT+ FVF+ + G +H +
Sbjct: 72 ALRACLQASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLHAACL 131
Query: 116 KTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD--------------------- 153
+T L V N ++ MY +G + ++ FDE+P KD
Sbjct: 132 RTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEAR 191
Query: 154 ----------VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
VVSW I+G+ + R DAV F M + PDE V+ LSAC+ L
Sbjct: 192 RLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSD-GVAPDEVAVIGALSACSKL 250
Query: 204 KNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTSM 261
KNL+LG+ +H + Q+ + T + AL+DMY KCG +++A+ +FD + + W ++
Sbjct: 251 KNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAI 310
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ GY G ++ AR LFD+ RD++ + +MI GY+ R +A+ LF +M+ ++ D
Sbjct: 311 IDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADN 370
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
F +V+LLT CA LGAL G+ +H I + + D + TAL++MY KCG +++A +F+
Sbjct: 371 FTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHR 430
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ E+D +WT++I GLA NG ALE F QM G +P +T+I VL+ACSH L+DEG
Sbjct: 431 MGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEG 490
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
R FN M ++++ P++EHYGC+IDLL R+GLLDEA L++ +P + N +I +G++LS
Sbjct: 491 RLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVI---WGSILS 547
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
ACR++ N+D+ A L K+ ++ + + L NIY + +W D VR M+E GV+K
Sbjct: 548 ACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKT 607
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
G SSI + G +H+F+ D SH EI +M++ +A
Sbjct: 608 AGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIA 643
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/606 (35%), Positives = 347/606 (57%), Gaps = 26/606 (4%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGS---IQ---------S 50
+ Q+ A+I + G +N K+++ H L+ +A +F + +Q
Sbjct: 30 VNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQRIRRNHLDDD 89
Query: 51 PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
P L +N +IK+++ ++L+LF + E G D F++ + KA + V++G+++
Sbjct: 90 PFL--WNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQI 147
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
HG ++K + + ++ N ++ MY G I +++FD MP +D VS+N I G+VK
Sbjct: 148 HGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTI 207
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNA 229
+ A ++F M ++ ++S S + G + + +++ E + N
Sbjct: 208 DLARELFDSMPL------EDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNT 261
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
++ + KCG + A LF+ MP ++VI W++M+ GY G ++ AR LFD P +D+V +
Sbjct: 262 IIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAF 321
Query: 290 TAMINGYVQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
++ GY Q + EA+ +F EMQ L PD+ LV L+ +QLG +E+ +H Y
Sbjct: 322 NTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFL 381
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
EN I+V VA ALI+MY+KCG IE A+ IF + +K W ++I G+A NG A
Sbjct: 382 ENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFG 441
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
+ +M KPD ITFIGVL+AC+H GLV EG F M +V++++PKL+HYGC++D+L
Sbjct: 442 MLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDIL 501
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
G+AGL++ A + I ++P E N+II + LLSAC+ + N +GE +A L ++S +SS
Sbjct: 502 GKAGLVEGALKFIEEMPIEPNDII---WRTLLSACQNHENFTIGELIAKHLMTMDSCNSS 558
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+ LL+NIYA W + VR MK+ + KVPGCS IE+ G++HEFLV D SH + E
Sbjct: 559 SYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSE 618
Query: 589 IYSMLD 594
IYS+LD
Sbjct: 619 IYSVLD 624
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 324/595 (54%), Gaps = 48/595 (8%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS-IQSPCLLAYNLLIKAFAKKGSFRKSL 73
++ N + K +V S + YA K+F Q N +IKA+ + + S
Sbjct: 5 AIETNVQIFTKFLVISA--SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSF 62
Query: 74 LLFSKLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDM 132
L+ LR E +PDNFT+ + K+ V +G ++H + + G D YV ++DM
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y GK+ + FDEMP + VSW ISG+++C + A +F + MP
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF-------DQMPHVKD 175
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
VV + NA++D + K G ++ AR LFDEM +
Sbjct: 176 VV-------------------------------IYNAMMDGFVKSGDMTSARRLFDEMTH 204
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K VI WT+M+ GY N ++ AR LFD P R++V W MI GY Q + E + LF+EM
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGITLFQEM 264
Query: 313 Q-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
Q L PD ++++L + GAL G+W H ++ ++ V TA+++MY+KCG
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IEKA IF E+ EK ASW ++I G A+NG AL+LF M+ KPD+IT + V++A
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI-EEKPDEITMLAVITA 383
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
C+HGGLV+EGR++F+ M E+ + K+EHYGC++DLLGRAG L EAE+LI +P E N I
Sbjct: 384 CNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGI 442
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I+ + LSAC Y +++ E++ ++E ++ + LL N+YA+ RW+D V+
Sbjct: 443 IL---SSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKN 499
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQN 606
M++ +K GCS IEIN I+ EF+ GD +H + I+ +L + + + K N
Sbjct: 500 VMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKYN 554
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/648 (33%), Positives = 346/648 (53%), Gaps = 74/648 (11%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTH---PSHGNLLYAEKIFGSIQSPCLLAYNLL 59
L+Q+ AQI L + + L+ CT P H Y +F S +P + + +
Sbjct: 16 HLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPH----YTHLLFNSTLNPNVFVFTSM 71
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
++ ++ K +L++ +++ GV PD F YP + K+ G G H +V+K G
Sbjct: 72 LRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGH 126
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD--KDVVSWNVSISGHVKCMRFEDAVDVF 177
D +V N+++DMY LG I + +K+FDE+PD + V WN +SG+ K A +F
Sbjct: 127 GSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLF 186
Query: 178 RRMRQGCNLMPDEGTVVST--LSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
++MP+ + T ++ +K+LE + RY + E + + NA+L Y
Sbjct: 187 -------DVMPERNVITWTAMVTGYAKVKDLEAAR---RYFDCMPERSVVSWNAMLSGYA 236
Query: 236 KCGCLSEARELFDEMPNKNV----ICWTSMVSG--------------------------- 264
+ G EA LFDEM N + W +++S
Sbjct: 237 QNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCF 296
Query: 265 --------YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QII 315
Y G L+ AR LF+ P R++V W +MI GY Q + A+ LF+EM
Sbjct: 297 VRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAK 356
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
+L PD+ +V++++ C LGALE G W+ ++ EN+I + A+I MY++CG +E A
Sbjct: 357 KLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDA 416
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F E+ +D S+ ++I G A +G +A+ L S M GG +PD +TFIGVL+ACSH
Sbjct: 417 KRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHA 476
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
GL++EGR+ F ++ + P ++HY C++DLLGR G L++A+ + ++P E + +
Sbjct: 477 GLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPH---AGV 528
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
YG+LL+A RI+ V++GE A L ++E +S LL+NIYASA RW+DV +R+ MK+
Sbjct: 529 YGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKK 588
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
GV+K G S +E G +H+F+V D SH +IY +L + K + ++
Sbjct: 589 GGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREA 636
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/668 (32%), Positives = 348/668 (52%), Gaps = 79/668 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L+QI +F+ GL Q KL+ +FC +G++ A ++F I S + Y+ +
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFC---RYGSVDEAARVFEPIDSKLNVLYHTM 106
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+K FAK K+L F ++R V P + + ++ K G E++ G+++HG +VK+G
Sbjct: 107 LKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D + + +MY ++ +K+FD MP++D+VSWN ++G+ + A+++ +
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-------------------- 219
M + NL P T+VS L A +AL+ + +GKEIH Y +
Sbjct: 227 MCEE-NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 220 ------------LEFTPIMGNALLDMYCKCGCLSEARELFDEM------P---------- 251
LE + N+++D Y + EA +F +M P
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 252 -----------------------NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
++NV S++S Y C +++ A +F + R +V
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W AMI G+ Q R +A+ F +M+ +KPD F V+++T A+L KWIHG +
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + + V TAL++MYAKCG I A IF + E+ +W ++I G +G ALE
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALE 525
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +M G KP+ +TF+ V+SACSH GLV+ G + F M E Y I+ ++HYG ++DLL
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLL 585
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG L+EA + I ++P + V +YGA+L AC+I+ NV+ EK A L ++ D
Sbjct: 586 GRAGRLNEAWDFIMQMPVKP---AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+H LLANIY +A+ WE V VR M G+RK PGCS +EI +H F G +H + K+
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 589 IYSMLDRM 596
IY+ L+++
Sbjct: 703 IYAFLEKL 710
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 308/542 (56%), Gaps = 42/542 (7%)
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
++ + KA+ ++K +K+H + + + +M Y G+ +K+FDEM
Sbjct: 20 SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEM 79
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
D++VV +NV I +V R++D + VFR M G PD T L AC+ +NL G
Sbjct: 80 SDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNG-GFRPDNYTYPCVLKACSCSENLRYG 138
Query: 210 KEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN- 267
IH + L+F +GN L+ MY KCGCL EAR +FDEM K+V+ W SMV+GY +
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHN 198
Query: 268 ---------CGQLEK---------------------------ARDLFDRSPVRDIVLWTA 291
C ++E +F ++++ W
Sbjct: 199 MRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNV 258
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI Y++ + +AV L+ +M+ R++PD ++L C L AL G+ IH Y+ + +
Sbjct: 259 MIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKK 318
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + ++ +LI+MYA+CG ++ A +F ++ +D ASWTS+I M G+ A+ LF+
Sbjct: 319 LCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFT 378
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+M++ G PD I F+ +LSACSH GL+DEGR +F MT+ Y+I P++EHY CL+DLLGRA
Sbjct: 379 EMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRA 438
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G +DEA +I+++P E NE + + LLS+CR++ N+D+G A L ++ + S ++
Sbjct: 439 GRVDEAYNIIKQMPIEPNERV---WATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYV 495
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LL+NIYA A RW++VT +R MK +RK PG S++E+N +H FL GD SH + KEIY
Sbjct: 496 LLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYE 555
Query: 592 ML 593
L
Sbjct: 556 EL 557
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 215/431 (49%), Gaps = 43/431 (9%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LK++ IF + QNP KLM ++ + G K+F + ++ YN++I+++
Sbjct: 37 LKKLHTMIFYLNSHQNPSLGIKLMR--SYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSY 94
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ LL+F ++ G PDN+TYP V KA ++ G +HG V+K GL+F+
Sbjct: 95 VNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNL 154
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N ++ MYG G + +++FDEM KDVVSWN ++G+ MRF+DA+++ R M +
Sbjct: 155 FVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREM-ED 213
Query: 184 CNLMPDEGTVVSTLSAC--TALKNLELGKEI------HRYINQELEFTPIMGNAL----L 231
PD T+ S + A T+ +N+ ++I I+ + M N+L +
Sbjct: 214 YGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAV 273
Query: 232 DMY-----CK--------------CGCLSE---ARELFDEMPNK----NVICWTSMVSGY 265
D+Y C+ CG LS R + + + K N++ S++ Y
Sbjct: 274 DLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMY 333
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
CG L+ A+ +FDR RD+ WT++I+ Y + AVALF EM PD V
Sbjct: 334 ARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFV 393
Query: 326 ALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR- 383
A+L+ C+ G L++G+ + ++ RIT L+++ + G +++A I ++
Sbjct: 394 AILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPI 453
Query: 384 EKDAASWTSII 394
E + W +++
Sbjct: 454 EPNERVWATLL 464
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/621 (35%), Positives = 352/621 (56%), Gaps = 90/621 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPS-HGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L+QI AQ+ + L + T+++L+ FC+ G L YA +F IQ P + L
Sbjct: 19 LCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFAL 78
Query: 60 IKAFAKKGSFRKSLLLFSKL-----RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
IK F+ + +SL+L++++ GV F+ P V KA G L +G +VHG V
Sbjct: 79 IKGFSDTSNPVESLILYARMLSCLNYSSGV---EFSIPSVLKACGKLLAFDEGRQVHGQV 135
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
+KT L FD +V NS++ MY G+I +++FD MP++DVVSWN I+G++K E A
Sbjct: 136 LKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAS 195
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMY 234
++F + MP+ V +C NA++D Y
Sbjct: 196 ELF-------DEMPERDLV-----SC---------------------------NAMIDGY 216
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KCG A ++F+ M +K+V+ WTSM+S YV +R P++
Sbjct: 217 GKCGRCELAEKVFETMSDKDVVTWTSMISAYVQ-----------NRCPMK---------- 255
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
A+ LFREM + L+PD +V++L+ A LG +E+GKW+H Y++ N+I +
Sbjct: 256 ----------ALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIEL 305
Query: 355 DA-VVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALELFSQ 412
+ + +ALI+MY+KCG IE A +F + ++ W S+I GLA++G +AL++F +
Sbjct: 306 SSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVE 365
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M +P++ITF+G+LS CSHGGLV+EG+ +F +M E Y+I P+++HYGC+IDL GRAG
Sbjct: 366 MERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAG 425
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
L++A +I+ +P E + + + A+LSA +G++++G+ A ++ DSS + L
Sbjct: 426 RLEDALGVIQNMPFEADLLA---WKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVL 482
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS- 591
L+NIYA A RW+DV +R M++ GV+K+ GCSS+ +BG +HEFL G E+ YS
Sbjct: 483 LSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXG----KELDSSYSG 538
Query: 592 -MLDRMAKTLLDSKQNAMEGD 611
+L ++A+ + K E D
Sbjct: 539 QVLAKIAEVVSRLKLQGYEPD 559
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/662 (33%), Positives = 350/662 (52%), Gaps = 80/662 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K I QI GLQ + N L+ C+ + A +F + L+ ++ ++ ++
Sbjct: 69 KIIHGQIIVSGLQSDTFLANILINVCSKSDRVD--NARVVFDKMPHKNLITWSSMVSMYS 126
Query: 65 KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
++G ++L++F L R+ G P+ F V +A LG V+KG ++HG+VV++G + D
Sbjct: 127 QQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 186
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YV S++D Y G I + +FD++ +K V+W I+G+ KC R ++++F +MR+
Sbjct: 187 YVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRE- 245
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
N++PD V S LSAC+ L+ LE GK+IH Y+ + E + N L+D Y KC +
Sbjct: 246 TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 305
Query: 243 ARELFDEMPNKNVICWTSMVSGYV--------------------------------NCGQ 270
R+LFD+M KN+I WT+M+SGY+ +CG
Sbjct: 306 GRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGS 365
Query: 271 ---LEKARD-----------------------------LFDRSPVRDI------VLWTAM 292
LE+ R L D V D+ + + AM
Sbjct: 366 REALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAM 425
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I GY + EA+ LF EM++ KP++F AL+T + L +L G+ H + + +
Sbjct: 426 IEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGL 485
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
V AL++MYAKCG IE+A ++F +D W S+I A +G+ +AL +F +
Sbjct: 486 DFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFRE 545
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M+ G +P+ +TF+ VLSACSH G V++G FN+M + I+P EHY C++ LLGR+G
Sbjct: 546 MMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSG 604
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
L EA+E I K+P E I+ + +LLSACRI GNV++G+ A + + KDS + L
Sbjct: 605 KLFEAKEFIEKMPIEPAAIV---WRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYIL 661
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+NI+AS W DV VR +M V K PG S IE+N ++ F+ D +H E +I S+
Sbjct: 662 LSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHRE-ADIGSV 720
Query: 593 LD 594
LD
Sbjct: 721 LD 722
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 118/285 (41%), Gaps = 41/285 (14%)
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
+QI L+P + LL + K IHG I + + D +A LI + +K
Sbjct: 40 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI-SGGAKPDDITFIGVLS 430
++ A +F ++ K+ +W+S++ + G +AL +F + G P++ V+
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159
Query: 431 ACSHGGLVDEGRRFF---------------NTMTEVYQIQPKLEHYGCLIDLLG------ 469
AC+ G+V++G + ++ + Y +E + D L
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 219
Query: 470 ---------RAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAA 517
+ G + EL ++ N +VP + ++LSAC + ++ G+++ A
Sbjct: 220 WTTIIAGYTKCGRSAVSLELFAQMRETN---VVPDRYVVSSVLSACSMLEFLEGGKQIHA 276
Query: 518 -LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
+L + D S +L + Y NR V R+ +M V+ +
Sbjct: 277 YVLRRGTEMDVSVVNVLIDFYTKCNR---VKAGRKLFDQMVVKNI 318
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/672 (31%), Positives = 348/672 (51%), Gaps = 79/672 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
M +L Q I + GL KL+ +FC G+L A ++F I+ Y+ +
Sbjct: 90 MKELHQFIPLIIKNGLYSEHLFQTKLVSLFC---KFGSLHEAARVFQPIEDKIDELYHTM 146
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+K +A+ S ++ F ++R GV P + + ++ K G +++KG+++H ++ G
Sbjct: 147 LKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGF 206
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ + +++MY + K+FD MP++D+V WN ISG+ + + A+++ R
Sbjct: 207 ASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLR 266
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG 238
M++ PD T+VS L A + +L +G+ IH Y + E + AL+DMY KCG
Sbjct: 267 MQEEGK-RPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCG 325
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVN--------------------------CGQLE 272
+ AR +FD M K V+ W SM+ GYV G L
Sbjct: 326 SVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALH 385
Query: 273 KARDLFDRSPVR-------------DIVLWTAMINGYVQFNRFDEAVALFR--------- 310
DL D R D+ + ++I+ Y + R D A +F
Sbjct: 386 ACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVS 445
Query: 311 ----------------------EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
+MQ+ +KPD F +V+++ A+L L Q KWIHG +
Sbjct: 446 WNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVI 505
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + VATAL++MYAKCG + A ++F + E+ +W ++I G +G ALE
Sbjct: 506 RTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALE 565
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +M KP+++TF+ VLSACSH GLV+EG ++F +M + Y ++P ++HYG ++DLL
Sbjct: 566 LFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLL 625
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRA L+EA + I+K+P E + ++GA+L ACRI+ NV++GEK A + ++ D
Sbjct: 626 GRANRLNEAWDFIQKMPIEP---AISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGG 682
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+H LLANIYA+A+ W+ V VR M++ G++K PG S +E+ +H F G SH + K+
Sbjct: 683 YHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKK 742
Query: 589 IYSMLDRMAKTL 600
IY+ L+ + +
Sbjct: 743 IYAFLETLGNRI 754
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 302/501 (60%), Gaps = 12/501 (2%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL--GKICNVKKLFDEMPDKDVVSWN 158
+GE+K+ +HG ++K G + ++ Y + + + +FD + + V WN
Sbjct: 24 IGELKQ---IHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWN 80
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIH-RYI 216
I + E+A+ ++ +M + +P T L AC+AL L +IH + I
Sbjct: 81 TMIRAYSNSNDPEEALLLYHQMLH--HSIPHNAYTFPFLLKACSALSALAETHQIHVQII 138
Query: 217 NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
+ N+LL +Y G + A LFD +P+++++ W +M+ GY+ CG +E A
Sbjct: 139 KRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYK 198
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
+F P ++++ WT+MI G+V+ EA+ L ++M + +KPDK L L+ CA LGA
Sbjct: 199 IFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGA 258
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
LEQGKWIH YI +N+I +D V+ ALI+MY KCG ++KAL +F +L +K +WT+II G
Sbjct: 259 LEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGG 318
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
A++GK ++AL+ F+QM G KP TF VL+ACSH GLV+EG+ F +M+ Y ++P
Sbjct: 319 FAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKP 378
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
+EHYGC++DLLGRAG L EA+E + +P + N I +G+LL+AC ++ ++++G+++
Sbjct: 379 VMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAI---WGSLLNACHLHKHLELGKEIG 435
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
L +++ + + LA+I+A+A W++ + VR +K G+ +PGCS+I +NG+ HEF
Sbjct: 436 KFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEF 495
Query: 577 LVGDPSHSEMKEIYSMLDRMA 597
G H ++E+Y M + +A
Sbjct: 496 FAGAEPHPHVREMYDMSNLIA 516
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 215/444 (48%), Gaps = 68/444 (15%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+LKQI Q+ + G ++ T+++L+ NL YA +F I SP + +N +I+A
Sbjct: 26 ELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRA 85
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
++ ++LLL+ ++ + + +T+PF+ KA L + + ++H ++K G +
Sbjct: 86 YSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSE 145
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-- 180
Y NS++ +Y + G I + LFD +P +D+VSWN I G++KC E A +F+ M
Sbjct: 146 VYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPE 205
Query: 181 --------------RQGCN--------------LMPDEGTVVSTLSACTALKNLELGKEI 212
R G + + PD+ T+ +LSAC L LE GK I
Sbjct: 206 KNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWI 265
Query: 213 HRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H YI + +++ P++G AL+DMY KCG + +A +F ++ K V WT+++ G+ G+
Sbjct: 266 HTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKG 325
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+A D W F +MQ +KP F A+LT C
Sbjct: 326 SEALD------------W-------------------FTQMQKAGIKPTSFTFTAVLTAC 354
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELREK-DAA 388
+ G +E+GK + ++ + V+ ++++ + G +++A E + K +AA
Sbjct: 355 SHTGLVEEGKSLFESMS-TFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAA 413
Query: 389 SWTSII--CGLAMNGKINKALELF 410
W S++ C L + ++ K + F
Sbjct: 414 IWGSLLNACHLHKHLELGKEIGKF 437
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 321/543 (59%), Gaps = 15/543 (2%)
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
+ F +RE +N+ PF+ + + + +K+H ++ GL +++ ++D+
Sbjct: 1 MAFHGIRE----VENYFIPFLQR----VKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLC 52
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
LG + +LF+++ + +V +N I + + D + +++++ + PD T
Sbjct: 53 DKLGDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTF 112
Query: 194 VSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
+C +L + LGK++H ++ + F + NAL+DMY K L +A ++FDEM
Sbjct: 113 PFMFKSCASLGSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSE 172
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
++VI W S++SGY GQ++KA+ LF + IV WTAMI+GY + EA+ FREM
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
Q+ ++PD+ L+++L CA LG+LE GKWIH Y + V ALIEMY+KCG++
Sbjct: 233 QLAGIEPDEISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGML 292
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+A+++F + + KD SW+++I G A +G ++A E F +M KP+ ITF+G+LSAC
Sbjct: 293 SQAIQLFEQTKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSAC 352
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SH GL +G ++F+ M + YQI+PK+EHYGCLID+L RAG L+ A E+ + +P + + I
Sbjct: 353 SHVGLWQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKI 412
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+G+LLS+CR GN+D+ L ++E D + LLANIYA +WEDV+ +R+
Sbjct: 413 ---WGSLLSSCRTKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKI 469
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDN 612
+++ ++K PGCS IE+N I+ EF+ GD S EI +L Q+ ++ +N
Sbjct: 470 IRKENMKKTPGCSLIEVNNIVQEFVAGDNSKPFWTEISLVLQLFTS---HQDQDVIKNNN 526
Query: 613 LVA 615
+A
Sbjct: 527 ALA 529
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 224/457 (49%), Gaps = 73/457 (15%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+ K+I A I GL Q+ + K++ C G++ YA ++F + +P + YN +I+A
Sbjct: 25 EWKKIHACIIVHGLSQSSFMVTKMVDLCD--KLGDMDYATRLFNQVSNPNVFLYNSIIRA 82
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + + ++ +L + + PD FT+PF+FK+ LG G++VHG++ K G F
Sbjct: 83 YTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRF 142
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR------------ 169
N+++DMY + + K+FDEM ++DV+SWN +SG+ + +
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQMKKAKGLFHLMI 202
Query: 170 -------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+ +A+D FR M Q + PDE +++S L +C L +LELGK
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREM-QLAGIEPDEISLISVLPSCAHLGSLELGK 261
Query: 211 EIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
IH Y + L+ T + NAL++MY KCG LS+A +LF++ K+VI W++M+SGY
Sbjct: 262 WIHMYAERRGLLKQTGVC-NALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGYAYH 320
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G +A + F EMQ ++KP+ + LL
Sbjct: 321 GNAHRAFE-------------------------------TFIEMQRAKVKPNGITFLGLL 349
Query: 329 TGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-D 386
+ C+ +G +QG K+ + +I LI++ A+ G +E+A+EI + K D
Sbjct: 350 SACSHVGLWQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPD 409
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ W S++ G ++ AL ++ +PDD+
Sbjct: 410 SKIWGSLLSSCRTKGNLDVALVAMDHLVE--VEPDDM 444
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 324/595 (54%), Gaps = 48/595 (8%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS-IQSPCLLAYNLLIKAFAKKGSFRKSL 73
++ N + K +V S + YA K+F Q N +IKA+ + + S
Sbjct: 5 AIETNVQIFTKFLVISA--SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSF 62
Query: 74 LLFSKLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDM 132
L+ LR E +PDNFT+ + K+ V +G ++H + + G D YV ++DM
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y GK+ + FDEMP + VSW ISG+++C + A +F + MP
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF-------DQMPHVKD 175
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
VV + NA++D + K G ++ AR LFDEM +
Sbjct: 176 VV-------------------------------IYNAMMDGFVKSGDMTSARRLFDEMTH 204
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K VI WT+M+ GY N ++ AR LFD P R++V W MI GY Q + E + LF+EM
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 313 Q-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
Q L PD ++++L + GAL G+W H ++ ++ V TA+++MY+KCG
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IEKA IF E+ EK ASW ++I G A+NG AL+LF M+ KPD+IT + V++A
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI-EEKPDEITMLAVITA 383
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
C+HGGLV+EGR++F+ M E+ + K+EHYGC++DLLGRAG L EAE+LI +P E N I
Sbjct: 384 CNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGI 442
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I+ + LSAC Y +++ E++ ++E ++ + LL N+YA+ RW+D V+
Sbjct: 443 IL---SSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKN 499
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQN 606
M++ +K GCS IEIN I+ EF+ GD +H + I+ +L + + + K N
Sbjct: 500 VMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKYN 554
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/482 (37%), Positives = 305/482 (63%), Gaps = 6/482 (1%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H +++ G D ++ ++ I ++F + +V + I G V
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGN 228
+ +A+ ++ RM +++PD + S L AC + L G+E+H R + ++
Sbjct: 128 YLEAIQLYSRMLHE-SILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRL 186
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
++++Y KCG L +AR +F+EMP ++V+ T M+S Y + G +E+A +F R +D V
Sbjct: 187 RIMELYGKCGELGDARRVFEEMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVC 245
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
WTAMI+G+V+ + A+ FR MQ ++P++F +V +L+ C+QLGALE G+W+H Y+
Sbjct: 246 WTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ I ++ V ALI MY++CG I++A +F E++++D ++ ++I GL+MNGK +A+E
Sbjct: 306 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 365
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF M+ +P ++TF+GVL+ACSHGGLVD G F++M Y+++P++EHYGC++DLL
Sbjct: 366 LFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLL 425
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GR G L+EA +LIR + + I++ G LLSAC+++ N+++GE++A LE DS
Sbjct: 426 GRVGRLEEAYDLIRTMKMTPDHIML---GTLLSACKMHKNLELGEQVAKELEDRGQADSG 482
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+ LL+++YAS+ +W++ VR KMKE G++K PGCSSIE+N IHEFL+GD H + +
Sbjct: 483 TYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKER 542
Query: 589 IY 590
IY
Sbjct: 543 IY 544
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 216/455 (47%), Gaps = 78/455 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+ I AQ+ + G Q+P + +L+ C+ H + YA +IF +P + Y LI
Sbjct: 62 INQVLPIHAQLIRNGHSQDPFMVFELLRSCS-KCHA-IDYASRIFQYTHNPNVYLYTALI 119
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F G++ +++ L+S++ + PDN+ + KA G +++G +VH +K G
Sbjct: 120 DGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFS 179
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPD----------------------------- 151
+ V IM++YG G++ + +++F+EMP+
Sbjct: 180 SNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVR 239
Query: 152 -KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
KD V W I G V+ A++ FR M QG N+ P+E T+V LSAC+ L LE+G+
Sbjct: 240 RKDTVCWTAMIDGFVRNEETNRALEAFRGM-QGENVRPNEFTIVCVLSACSQLGALEIGR 298
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+H Y+ + E+E +GNAL++MY +CG + EA+ +FDEM +++VI + +M+SG G
Sbjct: 299 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 358
Query: 270 QLEKARDLFD----------------------------------RSPVRD------IVLW 289
+ +A +LF S RD I +
Sbjct: 359 KSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHY 418
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
M++ + R +EA L R M ++ PD +L LL+ C LE G+ + + E
Sbjct: 419 GCMVDLLGRVGRLEEAYDLIRTM---KMTPDHIMLGTLLSACKMHKNLELGEQVAKEL-E 474
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+R D+ L +YA G ++A ++ +++E
Sbjct: 475 DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 509
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 12/187 (6%)
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
II L + IN+ L + +Q+I G D +L +CS +D R F Y
Sbjct: 52 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ-----Y 106
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNV 509
P + Y LID +G EA +L ++ +E+ I+P L ++L AC +
Sbjct: 107 THNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHES---ILPDNYLMASILKACGSQLAL 163
Query: 510 DMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
G ++ + K+ S + + +Y D V ++M E V SS
Sbjct: 164 REGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYS 223
Query: 569 INGIIHE 575
G++ E
Sbjct: 224 DQGLVEE 230
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 340/627 (54%), Gaps = 56/627 (8%)
Query: 20 PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA----YNLLIKAFAKKGSFRKSLLL 75
P+ + + + + + G+L + KIF +P + YN +I A++ ++ L
Sbjct: 77 PDIVARTTLIAAYSAAGDLKLSRKIFS--DTPLGMRDSVFYNAMITAYSHNHDGHAAIEL 134
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG-EKVHGYVVKTGLEFDTYVCNSIMDMY- 133
F ++ PDN+T+ V A+ + E +K +++H VVK+G F T V N+++ Y
Sbjct: 135 FCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYV 194
Query: 134 --------GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE-------------- 171
+ +KLFDEMP++D +SW I+G+VK +
Sbjct: 195 KCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLG 254
Query: 172 -----------------DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
+A ++FR+M + DE T S +S C LGKE+H
Sbjct: 255 VAWNAMISGYAHRGLYLEAFEMFRKMIMS-KIQLDEFTFTSVISVCANAGCFRLGKEMHA 313
Query: 215 YI-----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
Y N + + NAL+ Y KCG + A+E+F++MP ++++ W ++SGYVN
Sbjct: 314 YFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVR 373
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
+++A+ F+ P ++I+ W MI+G Q +EA+ F M++ +P + +
Sbjct: 374 CMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAII 433
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C+ LG+L+ G+ +H + ALI MYA+CG+++ A +F + DA S
Sbjct: 434 SCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAIS 493
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W ++I L +G+ +A+ELF +M+ G PD I+F+ V+SACSH GLV EGR++F++M
Sbjct: 494 WNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMH 553
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
VY + P EHY +IDLL RAG EA+E++ +P E P++ ALL+ CRI+GN+
Sbjct: 554 NVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPG---APIWEALLAGCRIHGNI 610
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
D+G + A L +++ + + LL+N+YA A +W D+ VR+ M++ GV+K PGCS IE+
Sbjct: 611 DLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEV 670
Query: 570 NGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+H FLVGD +H E+++IY+ L+++
Sbjct: 671 ENKVHSFLVGDANHPEVRQIYNYLEQL 697
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 187/429 (43%), Gaps = 72/429 (16%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
N + L+ + + + +L A++ +A+N +I +A +G + ++ +F K
Sbjct: 220 NRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRK 279
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT----GLEFDTYVCNSIMDMYG 134
+ + D FT+ V G + G+++H Y +KT + V N+++ Y
Sbjct: 280 MIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYW 339
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGH--VKCMR----------------------- 169
GK+ +++F++MP++D+VSWN+ +SG+ V+CM
Sbjct: 340 KCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISG 399
Query: 170 ------FEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELE 221
E+A+ F RM+ QG P + + +C+ L +L+ G+++H + + E
Sbjct: 400 LAQIGFAEEALKFFNRMKLQG--FEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYE 457
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ GNAL+ MY +CG + A LF MP + I W +M++ GQ
Sbjct: 458 SSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQ----------- 506
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG- 340
+A+ LF EM + PD+ + +++ C+ G +++G
Sbjct: 507 --------------------GTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGR 546
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAM 399
K+ N + D +I++ + G +A E+ + E A W +++ G +
Sbjct: 547 KYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRI 606
Query: 400 NGKINKALE 408
+G I+ +E
Sbjct: 607 HGNIDLGIE 615
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 165/347 (47%), Gaps = 24/347 (6%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RD 285
N L+D+Y K L+ AR LFDE+P +++ T++++ Y G L+ +R +F +P+ RD
Sbjct: 52 NRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRD 111
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIH 344
V + AMI Y + A+ LF +MQ +PD + ++L A + E+ + +H
Sbjct: 112 SVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLH 171
Query: 345 GYINENRITVDAVVATALIEMYAKC---------GLIEKALEIFYELREKDAASWTSIIC 395
+ ++ V ALI Y KC L+ +A ++F E+ +D SWT+II
Sbjct: 172 CAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIIT 231
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G N ++ A E ++G +K + + ++S +H GL E F M + +IQ
Sbjct: 232 GYVKNNDLDAAKEF----LNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMI-MSKIQ 286
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEEL----IRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
+ +I + AG +E+ ++ + N ++ +P+ AL++ G VD+
Sbjct: 287 LDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDI 346
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
++ + K+ +D ++ + Y + ++ + +M E +
Sbjct: 347 AQE---IFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNI 390
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/487 (38%), Positives = 306/487 (62%), Gaps = 15/487 (3%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMD--MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+H ++++T L FD + + ++ + + ++ ++ + ++ +N I G C
Sbjct: 36 IHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRG---C 92
Query: 168 MRFEDAVDVF----RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
E+ + F + +R G L+PD T + AC L+N +G + H + I E
Sbjct: 93 STSENPENSFHYYIKALRFG--LLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQ 150
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ N+L+ MY G ++ AR +F M +V+ WT M++GY CG + AR+LFDR P
Sbjct: 151 DFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMP 210
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R++V W+ MI+GY + N F++AV F +Q + ++ ++V +++ CA LGAL G+
Sbjct: 211 ERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEK 270
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
H Y+ N+++++ ++ TA+++MYA+CG +EKA+ +F +L EKD WT++I GLAM+G
Sbjct: 271 AHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGY 330
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
KAL FS+M G P DITF VL+ACSH G+V+ G F +M + ++P+LEHYG
Sbjct: 331 AEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYG 390
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C++DLLGRAG L +AE+ + K+P + N P++ ALL ACRI+ NV++GE++ +L ++
Sbjct: 391 CMVDLLGRAGKLRKAEKFVLKMPVKPN---APIWRALLGACRIHKNVEVGERVGKILLEM 447
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
+ + S + LL+NIYA AN+W+DVT +RQ MK+ GVRK PG S IEI+G +HEF +GD +
Sbjct: 448 QPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKT 507
Query: 583 HSEMKEI 589
H E+++I
Sbjct: 508 HPEIEKI 514
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 240/558 (43%), Gaps = 113/558 (20%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LK I A + + L + ++L+ FC + L YA ++ IQ+P L YN LI+
Sbjct: 33 LKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGC 92
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ + S + K G+ PDN T+PF+ KA L G + HG +K G E D
Sbjct: 93 STSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDF 152
Query: 124 YVCNSIMDMYGVLG----------KIC---------------------NVKKLFDEMPDK 152
YV NS++ MY +G ++C + ++LFD MP++
Sbjct: 153 YVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPER 212
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
++V+W+ ISG+ + FE AV+ F + Q ++ +E +V +S+C L L +G++
Sbjct: 213 NLVTWSTMISGYARNNCFEKAVETFEAL-QAEGVVANETVMVGVISSCAHLGALAMGEKA 271
Query: 213 HRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H Y+ +L I+G A++DMY +CG + +A +F+++P K+V+CWT++++G G
Sbjct: 272 HEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYA 331
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
EKA LW F EM P A+LT C
Sbjct: 332 EKA-------------LW------------------YFSEMAKKGFVPRDITFTAVLTAC 360
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-----EKD 386
+ G++E+ LEIF ++ E
Sbjct: 361 SH-----------------------------------AGMVERGLEIFESMKRDHGVEPR 385
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+ ++ L GK+ KA + +M KP+ + +L AC V+ G R
Sbjct: 386 LEHYGCMVDLLGRAGKLRKAEKFVLKM---PVKPNAPIWRALLGACRIHKNVEVGERVGK 442
Query: 447 TMTEVYQIQPKLE-HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+ E +QP+ HY L ++ RA + ++R++ + P Y + ++
Sbjct: 443 ILLE---MQPEYSGHYVLLSNIYARANKWKDV-TVMRQMMKDKGVRKPPGYSLIEIDGKV 498
Query: 506 YGNVDMGEKLAALLEKIE 523
+ +G+K +EKIE
Sbjct: 499 H-EFTIGDKTHPEIEKIE 515
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/537 (38%), Positives = 316/537 (58%), Gaps = 15/537 (2%)
Query: 45 FGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEV 104
+G + P L +N +IK+ + R+SL LF + E GVS D F+ V KA LG V
Sbjct: 64 YGETEDPFL--WNAVIKSHSHGTDPRRSLFLFCLMLENGVSVDKFSLSLVLKACSRLGFV 121
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K G +HG++ KTGL D ++ N ++ +Y G + +++FD MP +D VS+N I G+
Sbjct: 122 KAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGY 181
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EF 222
VKC E A ++F +LMP E ++S + G I + E+ E
Sbjct: 182 VKCGLIESARELF-------DLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEK 234
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
I N+++D Y K G + +A++LFD MP ++VI W +M+ GY G + +A+ LFD+ P
Sbjct: 235 DLISWNSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIP 294
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGK 341
RD+V + +M+ GYVQ EA+ LF +M+ L PD+ LV +L+ AQLG L +
Sbjct: 295 HRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 354
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H YI + + + + ALI+MY+KCG I+ A+ +F L K+ W +II GLA++G
Sbjct: 355 DMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIHG 414
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A ++ Q+ KPDDITFIGVL+ACSH GLV EG F M ++I+P+L+HY
Sbjct: 415 LGGPAFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 474
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++D+L R+G ++ A+ LI K+P E N++I + L+AC + +MGE +A L
Sbjct: 475 GCMVDILSRSGSIELAKILIEKMPIEPNDVI---WRTFLTACSHHKEFEMGELVAKHLIL 531
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ S + LL+N+YAS W+DV VR MKE ++K+PGCS IE++G +HEF V
Sbjct: 532 QAGYNPSSYVLLSNMYASCGMWKDVRRVRTMMKERKIQKIPGCSWIELDGRVHEFFV 588
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 313/505 (61%), Gaps = 11/505 (2%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG---VLGKICNVKKLFDEMPDKDVVSWNVS 160
+ + +++ ++ T D Y I+ ++ + ++LF + +K WN
Sbjct: 24 ISQLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLFLCLQNKSTFIWNTM 83
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
+ V+ A +++ M + N +P+ T + AC + NL++G H + +
Sbjct: 84 MQAFVEKNEAVRAFSLYKHMLES-NYLPNNFTFSFVIRACIDVFNLQMGLCFHGQVVKFG 142
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
E + N L+ +Y CG + AR +FD ++V+ WT ++SGY+N GQ+ AR+LFD
Sbjct: 143 WESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQVLIARELFD 202
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
R P ++ V W A+I GYV+ F EA+ +F +MQ+ + ++ +V LT CA LGAL+Q
Sbjct: 203 RMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQ 262
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G+WIH Y+ + +++D ++ TALI+MYAKCG IE A +F E+ ++D ++T +I GLA
Sbjct: 263 GRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCLISGLAN 322
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+ K A++LF++M G P+++TF+ VL+ACS G+VDEG R F +M+ Y I+P+++
Sbjct: 323 HDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQ 382
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGCL+DLLGRAG ++EA++++R++P + + + GALL ACR++G+V +GE++ L
Sbjct: 383 HYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTL---GALLDACRVHGDVQLGEEMVDSL 439
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+ H LL+N+YASA++WED + +R+KM++ +RK+PGCSSIE+NG + EF+ G
Sbjct: 440 VQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSIEVNGTVCEFVTG 499
Query: 580 DPSHSEMKEIYSML---DRMAKTLL 601
D S++ ++I +L D+ K+L
Sbjct: 500 DRSYALEEDIMFLLFGIDKQLKSLF 524
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G +L A ++F + +++ LI + + G F+++L +F ++ G + +
Sbjct: 192 GQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGAL 251
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +LG + +G +H YV + + D + +++DMY G I +FDEM D+DV
Sbjct: 252 TACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVY 311
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
++ ISG + E A+D+F RM Q ++P+E T V L+AC+ + ++ G I
Sbjct: 312 AFTCLISGLANHDKSEAAIDLFNRM-QDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFES 370
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
++ P + + L+D+ + G + EA+++ EMP
Sbjct: 371 MSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMP 408
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 206/568 (36%), Positives = 319/568 (56%), Gaps = 40/568 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F + L+ +N +I +A+ G + +L+L ++ E G PD+ T + AV
Sbjct: 84 AYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVAD 143
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
++ G VHGYV++ G E V +++DMY G + + +FD M + VVSWN
Sbjct: 144 TRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSM 203
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
I G+V+ E A+ +F++M + P TV+ L AC L +LE GK +H+ ++Q +
Sbjct: 204 IDGYVQSGDAEGAMLIFQKMLDE-GVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLK 262
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L+ + N+L+ MY KC + A ++F + NK ++ W +M+ GY
Sbjct: 263 LDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQ------------ 310
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
NG V +EA+ F EMQ +KPD F +V+++ A+L Q
Sbjct: 311 --------------NGCV-----NEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQ 351
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
KWIHG + + + V TAL++MYAKCG I A ++F + + +W ++I G
Sbjct: 352 AKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGT 411
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G ++ELF +M G KP+DITF+ LSACSH GLV+EG FF +M + Y I+P ++
Sbjct: 412 HGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMD 471
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYG ++DLLGRAG L++A + I+K+P + + +YGA+L AC+I+ NVD+GEK A +
Sbjct: 472 HYGAMVDLLGRAGRLNQAWDFIQKMPIKPG---ITVYGAMLGACKIHKNVDLGEKAAFEI 528
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
K+ D +H LLANIYA+A+ W V VR M++ G++K PGCS +EI +H F G
Sbjct: 529 FKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSG 588
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDSKQNA 607
SH + K+IYS L+ TL+D + A
Sbjct: 589 TTSHPQSKKIYSYLE----TLVDEIRAA 612
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 61/476 (12%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
++K +AK S +L FS+++ V P + + ++ K G ++K+G+++HG V+ +G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
++ + +++MY +I + +FD MP++D+V WN ISG+ + + A+ +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
RM + + PD T+VS L A + L +G +H Y+
Sbjct: 121 RMSEEGH-RPDSITIVSILPAVADTRLLRIGMAVHGYV---------------------- 157
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
R F+ + N + T++V Y CG + AR +FD R +V W +MI+GYVQ
Sbjct: 158 ----LRAGFESLVNVS----TALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQ 209
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ A+ +F++M ++P ++ L CA LG LE+GK++H +++ ++ D V
Sbjct: 210 SGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+LI MY+KC ++ A +IF LR K SW ++I G A NG +N+AL F +M S
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI 329
Query: 419 KPDDITFIGVLSACS-----------HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
KPD T + V+ A + HG ++ RRF + V L+D+
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVI---RRFLDKNVFVMT---------ALVDM 377
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
+ G + A RK+ + N V + A++ YG +G+ L ++++
Sbjct: 378 YAKCGAIHTA----RKLFDMMNARHVITWNAMIDG---YGTHGLGKTSVELFKEMK 426
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 33/306 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A IF + ++++N +I + + G ++L+F K+ + GV P N T
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG++++G+ VH V + L+ D V NS++ MY ++ +F + +K +V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR- 214
SWN I G+ + +A++ F M Q N+ PD T+VS + A L K IH
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEM-QSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I + L+ + AL+DMY KCG + AR+LFD M ++VI W +M+ GY G L K
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHG-LGKT 417
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+V LF+EM+ +KP+ + L+ C+
Sbjct: 418 ------------------------------SVELFKEMKKGTIKPNDITFLCALSACSHS 447
Query: 335 GALEQG 340
G +E+G
Sbjct: 448 GLVEEG 453
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 134/251 (53%), Gaps = 5/251 (1%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K + + Q+ L + +N L+ + ++ A IF ++++ L+++N +I +A
Sbjct: 252 KFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDI--AADIFKNLRNKTLVSWNAMILGYA 309
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G ++L F +++ R + PD+FT V A+ L ++ + +HG V++ L+ + +
Sbjct: 310 QNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVF 369
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V +++DMY G I +KLFD M + V++WN I G+ + +V++F+ M++G
Sbjct: 370 VMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKG- 428
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
+ P++ T + LSAC+ +E G + ++ P M + A++D+ + G L++
Sbjct: 429 TIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQ 488
Query: 243 ARELFDEMPNK 253
A + +MP K
Sbjct: 489 AWDFIQKMPIK 499
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 33/295 (11%)
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
M+ GY + + D A++ F M+ ++P + LL C L++GK IHG + +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + T ++ MYAKC I A +F + E+D W ++I G A NG AL L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 412 QMISGGAKPDDITFIGVLSACS-----------HGGLVDEG-RRFFNTMTEVYQIQPK-- 457
+M G +PD IT + +L A + HG ++ G N T + + K
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 458 -----------LEH-----YGCLIDLLGRAGLLDEAEELIRKIPNENNEII-VPLYGALL 500
++H + +ID ++G + A + +K+ +E + V + GA L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA-L 239
Query: 501 SACRIYGNVDMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKMK 554
AC G+++ G+ + L+++++ D S L ++Y+ R + ++ + ++
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR 294
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 202/597 (33%), Positives = 336/597 (56%), Gaps = 39/597 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q K++ A++ ++GL + E + + G++ A ++F ++ ++++ +I
Sbjct: 322 LEQGKRVHARMKEVGL--DTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMI 379
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
FA+ G ++ L F+K+ E G+ P+ T+ + A +K+G ++H ++K G
Sbjct: 380 AGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYI 439
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V +++ MY G + + + +F+ + ++VV+WN I+ +V+ ++++AV F+ +
Sbjct: 440 TDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQAL 499
Query: 181 -RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
++G + PD T S L+ C + LELGK + I I D++ +
Sbjct: 500 LKEG--IKPDSSTFTSILNVCKSPDALELGKWVQSLI--------IRAGFESDLHIR--- 546
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
++VS +VNCG L A +LF+ P RD+V W +I G+VQ
Sbjct: 547 -------------------NALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQH 587
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
A F+ MQ +KPD+ LL CA AL +G+ +H I E + D VV
Sbjct: 588 GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVG 647
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
T LI MY KCG I+ A +F+ L +K+ SWTS+I G A +G+ +ALELF QM G K
Sbjct: 648 TGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVK 707
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD ITF+G LSAC+H GL+ EG F +M + + I+P++EHYGC++DL GRAGLL EA E
Sbjct: 708 PDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVE 766
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
I K+ + + L+GALL AC+++ +V++ EK+A +++ D + +L+NIYA+
Sbjct: 767 FINKMQVKPDS---RLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAA 823
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
A W++VT +R+ M + GV K PG S IE++G +H F D +H +++EI++ L R+
Sbjct: 824 AGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRL 880
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 251/490 (51%), Gaps = 39/490 (7%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N + +K G +++L+ + + TY + + + GE++H ++
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
+ ++ D ++ N ++ MY G + K++FDEMPDKDV SWN+ + G+V+ R+E+A +
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
+M Q + PD+ T V L+AC KN++ G E+ I N + +G AL++M+
Sbjct: 193 HEQMVQD-GVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHI 251
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG + +A ++F+ +P +++I WTSM++G L + R
Sbjct: 252 KCGGVDDALKVFNNLPRRDLITWTSMITG------LARHR-------------------- 285
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+F +A LF+ M+ ++PDK V+LL C ALEQGK +H + E + +
Sbjct: 286 -----QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE 340
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V TAL+ MY KCG +E ALE+F ++ ++ SWT++I G A +G++ +A F++MI
Sbjct: 341 IYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE 400
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G +P+ +TF+ +L ACS + +GR+ + + + I L+ + + G L
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTA-LLSMYAKCGSLM 459
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG-EKLAALLEKIESKDSSFHTLLA 534
+A + +I +N V + A+++A + D ALL++ DSS T +
Sbjct: 460 DARNVFERISKQN----VVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSIL 515
Query: 535 NIYASANRWE 544
N+ S + E
Sbjct: 516 NVCKSPDALE 525
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 225/457 (49%), Gaps = 32/457 (7%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H G + A K+F ++ L+ + +I A+ F+++ LF + E GV PD +
Sbjct: 250 HIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAF 309
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ KA +++G++VH + + GL+ + YV +++ MY G + + ++F+ +
Sbjct: 310 VSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKG 369
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
++VVSW I+G + R E+A F +M + + P+ T +S L AC+ L+ G++
Sbjct: 370 RNVVSWTAMIAGFAQHGRMEEAFLFFNKMIES-GIEPNRVTFMSILGACSRPSALKQGRQ 428
Query: 212 IHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
IH D K G +++ R T+++S Y CG L
Sbjct: 429 IH------------------DRIIKAGYITDDR------------VRTALLSMYAKCGSL 458
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
AR++F+R +++V W AMI YVQ ++D AVA F+ + +KPD ++L C
Sbjct: 459 MDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVC 518
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
ALE GKW+ I D + AL+ M+ CG + A+ +F ++ E+D SW
Sbjct: 519 KSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWN 578
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+II G +G+ A + F M G KPD ITF G+L+AC+ + EGRR +TE
Sbjct: 579 TIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEA 638
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ G LI + + G +D+A + +P +N
Sbjct: 639 ALDCDVVVGTG-LISMYTKCGSIDDAHLVFHNLPKKN 674
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 233/471 (49%), Gaps = 34/471 (7%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
P+ M+ + GN A++IF + + ++NLL+ + + + ++ L +
Sbjct: 136 QPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQ 195
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
+ + GV PD +T+ ++ A V KG ++ ++ G + D +V ++++M+ G
Sbjct: 196 MVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGG 255
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ + K+F+ +P +D+++W I+G + +F+ A ++F+ M + + PD+ VS L
Sbjct: 256 VDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEE-GVQPDKVAFVSLLK 314
Query: 199 ACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC + LE GK +H + + L+ +G ALL MY KCG + +A E+F+ + +NV+
Sbjct: 315 ACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVS 374
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
WT+M++G+ G++E+A ++ FN+ E+ +
Sbjct: 375 WTAMIAGFAQHGRMEEA---------------------FLFFNKMIES----------GI 403
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+P++ +++L C++ AL+QG+ IH I + D V TAL+ MYAKCG + A
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN 463
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F + +++ +W ++I + K + A+ F ++ G KPD TF +L+ C
Sbjct: 464 VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDA 523
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
++ G ++ ++ + L L+ + G L A L +P +
Sbjct: 524 LELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERD 573
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 7/231 (3%)
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
+T+ SG + GQ + D +++ A +N + + EA+ + + +
Sbjct: 47 YTTSFSGSYSKGQGNEFVD------IKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHI 100
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+ + +LL C + L G+ IH +I ++I D + LI MYAKCG A +
Sbjct: 101 QIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQ 160
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
IF E+ +KD SW ++ G + + +A L QM+ G KPD TF+ +L+AC+
Sbjct: 161 IFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKN 220
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
VD+G F+ + L LI++ + G +D+A ++ +P +
Sbjct: 221 VDKGGELFSLILNA-GWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRD 270
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/499 (38%), Positives = 297/499 (59%), Gaps = 6/499 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTY-VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+++ +++H + GL + + I Y G+ + +LFDE+P D++S+ +S
Sbjct: 33 IRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMS 92
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
H+K A+ VF + PD V LSA L + +G +H I + L+
Sbjct: 93 LHLKLDHHWKAISVFSHAIASGH-RPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLD 151
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
++ NAL+DMYC+CG AR +FD M K+ + W SM+ GY+ C ++ A F +
Sbjct: 152 SELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQM 211
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P++ V WTA+I G+VQ + +A+ LF +M + +P+ +V +L+ CA +GAL+ G+
Sbjct: 212 PMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGR 271
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
IHGY +++ T + +V AL++MYAK G I A +F E++ KDA +WT++I + G
Sbjct: 272 AIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQG 331
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
KA+ELF M+ G P+ +TF+ VLSACSH GL+ EGR F+ M EVY I P+LEHY
Sbjct: 332 NGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHY 391
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++DLLGR GLL+EAE LI + E + +I + +LLSAC +GN + E + K
Sbjct: 392 GCMVDLLGRGGLLEEAEALIDHMDVEPDIVI---WRSLLSACLAHGNDRLAEIAGKEIIK 448
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
E D + LL N+YA +NRW++ ++R++M + K PGCS IE++G++HEFLV D
Sbjct: 449 REPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVHEFLVEDK 508
Query: 582 SHSEMKEIYSMLDRMAKTL 600
SH +EIY L+ MA+ L
Sbjct: 509 SHDARREIYVTLEIMARHL 527
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 204/457 (44%), Gaps = 66/457 (14%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+L++I AQ GL N ++++ +F ++ G A ++F I P ++++ L+
Sbjct: 35 ELQRIHAQALTHGLHPNQQSIS-CKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMSL 93
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
K K++ +FS G PD F A G LG+ + G VHG + + GL+ +
Sbjct: 94 HLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLDSE 153
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR- 181
VCN+++DMY GK + +FD M KD V+W + G++KC+ + A+ F +M
Sbjct: 154 LVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPM 213
Query: 182 --------------------QGCNLM---------PDEGTVVSTLSACTALKNLELGKEI 212
Q L P+ T+V LSAC + L+LG+ I
Sbjct: 214 KSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAI 273
Query: 213 HRYINQELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H Y ++ T I+ NAL+DMY K G ++ A +F+E+ K+ WT+M+S + G
Sbjct: 274 HGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNG 333
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
KA +LF W + +G + P+ V++L+ C
Sbjct: 334 RKAVELF----------WDMLRSGIL---------------------PNSVTFVSVLSAC 362
Query: 332 AQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAAS 389
+ G +++G+ + + E I ++++ + GL+E+A + + E D
Sbjct: 363 SHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVI 422
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
W S++ +G ++ E+ + I DD ++
Sbjct: 423 WRSLLSACLAHGN-DRLAEIAGKEIIKREPGDDGVYV 458
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 313/557 (56%), Gaps = 36/557 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + L+++N +I F++ G +K+L L ++++ G PD+ T V A
Sbjct: 201 AYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAAD 260
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+G + G+ +HGY ++ G + ++ DMY G + + +FD M K VVSWN
Sbjct: 261 VGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSM 320
Query: 161 ISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
+ G+V+ E A+ VF +M +G + P T++ L AC L +LE GK +H++++Q
Sbjct: 321 MDGYVQNGEPEKAIAVFEKMLEEGID--PTGVTIMEALHACADLGDLERGKFVHKFVDQ- 377
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L++ ++ S++S Y C +++ A D+F+
Sbjct: 378 -----------LNL------------------GSDISVMNSLISMYSKCKRVDIASDIFN 408
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
R V W AMI GY Q R EA+ F EM+ + +KPD F +V+++ A+L
Sbjct: 409 NLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRH 468
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
KWIHG I + + + V TAL++MY+KCG I A ++F + ++ +W ++I G
Sbjct: 469 AKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGT 528
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G AL+LF +M G +P+DIT++ V+SACSH GLVDEG R F +M + Y ++P ++
Sbjct: 529 HGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMD 588
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYG ++DLLGRAG + EA + I +P + +YGA+L AC+I+ N+++GEK A L
Sbjct: 589 HYGAMVDLLGRAGRIKEAWDFIENMPISPG---ITVYGAMLGACKIHKNIEVGEKAAKKL 645
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++ + +H LLANIYAS ++W V VR+ M++ G++K PGCS +E+ +H F G
Sbjct: 646 FELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSG 705
Query: 580 DPSHSEMKEIYSMLDRM 596
+H + K IY+ L+ +
Sbjct: 706 STTHPQSKRIYAFLEEL 722
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 4/186 (2%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIV--LWTAMINGYVQFNRFDEAVALFREMQIIR 316
T +VS + G + +A +F+ P+ D + L+ M+ GY + + + A+A M+
Sbjct: 85 TKLVSLFSKYGSINEAARVFE--PIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD 142
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+KP + LL C L++GK IHG + N + T ++ MYAKC I+ A
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F + E+D SW +II G + NG KALEL +M G +PD IT + VL A + G
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 437 LVDEGR 442
L+ G+
Sbjct: 263 LLMVGK 268
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 216/582 (37%), Positives = 328/582 (56%), Gaps = 43/582 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQS-PCLLAYNLLIKA 62
L+Q+ AQ+ +P N L+ H N YA +F I P A+N++I+A
Sbjct: 34 LQQVHAQMVVKSSIHSPN--NHLLSKAIHLK--NFTYASLLFSHIAPHPNDYAFNIMIRA 89
Query: 63 FAKK-GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ +L LF ++ +SP+NFT+PF F + L + H V K L
Sbjct: 90 LTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHS 149
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D + +S++ MY G++ +K+FDE+P +D+VSWN I+G+ K +AV+VF M
Sbjct: 150 DPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMG 209
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+ PDE ++VS L AC L +LELG+ + ++ + + +G+AL+ MY K
Sbjct: 210 RRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAK---- 265
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
CG L AR +FD RD++ W A+I+GY Q
Sbjct: 266 ---------------------------CGDLGSARRIFDGMAARDVITWNAVISGYAQNG 298
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
DEA++LF M+ + +K L A+L+ CA +GAL+ GK I Y ++ D VAT
Sbjct: 299 MADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVAT 358
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI--SGGA 418
ALI+MYAKCG + A +F E+ +K+ ASW ++I LA +GK +AL LF M GGA
Sbjct: 359 ALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGA 418
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+DITF+G+LSAC H GLV+EG R F+ M+ ++ + PK+EHY C++DLL RAG L EA
Sbjct: 419 RPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAW 478
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
+LI K+P + +++ + GALL ACR NVD+GE++ ++ +++ +S + + + IYA
Sbjct: 479 DLIEKMPEKPDKVTL---GALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYA 535
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+ N WED +R M++ G+ K PGCS IE+ +HEF GD
Sbjct: 536 NLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGD 577
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 302/536 (56%), Gaps = 42/536 (7%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++K VH ++ L +++ + +M Y L + +K+FDE+P+++V+ NV I
Sbjct: 55 DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
+V + + + VF M C++ PD T L AC+ N+ +GK+IH + L
Sbjct: 115 SYVNNGFYREGIQVFGTM-CSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLS 173
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN----------CGQL 271
T +GN L+ MY KCG LSEAR + DEM ++V+ W S+V+GY C ++
Sbjct: 174 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM 233
Query: 272 EKAR---------------------------DLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
E + D+F + + +V W MI Y++ E
Sbjct: 234 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 293
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
AV L+ M+ +PD + ++L C AL GK IHGYI ++ + ++ ALI+
Sbjct: 294 AVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 353
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MYAKCG +++A ++F ++ +D SWT++I +G+ A+ LFS+M G PD I
Sbjct: 354 MYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIA 413
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ L+ACSH GL++EGR F MT+ Y+I P+LEH C++DLLGRAG + EA + I+++
Sbjct: 414 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEM 473
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P E NE + +GALL ACR++ N D+G A L ++ + S ++ LL+NIYA A RWE
Sbjct: 474 PMEPNERV---WGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWE 530
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+VTN+R MK G++K PG S++E+N IIH FLVGD SH + EIY LD + K +
Sbjct: 531 EVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKM 586
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 235/516 (45%), Gaps = 70/516 (13%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L+ + ++I L+ N KLM + S ++ A K+F I ++ N++I
Sbjct: 56 LKTLRTVHSRIISEDLRYNSSLGVKLMR--AYASLKDVATARKVFDEIPERNVIIINVMI 113
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+++ G +R+ + +F + V PD++T+P V KA G + G+K+HG K GL
Sbjct: 114 RSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLS 173
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+V N ++ MYG G + + + DEM +DVVSWN ++G+ + RF+DA++V R M
Sbjct: 174 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM 233
Query: 181 RQGCNLMPDEGTVVSTLSAC--TALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
+ + D GT+ S L A T +N+ K++ + ++ + + N ++ +Y K
Sbjct: 234 -ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK---SLVSWNVMIGVYMKNA 289
Query: 239 CLSEARELFDEM------PN---------------------------------KNVICWT 259
EA EL+ M P+ N++
Sbjct: 290 MPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 349
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
+++ Y CG L++ARD+F+ RD+V WTAMI+ Y R +AVALF +MQ L P
Sbjct: 350 ALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVP 409
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEI 378
D V L C+ G LE+G+ + ++ +IT ++++ + G +++A +
Sbjct: 410 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKF 469
Query: 379 FYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
E+ E + W +++ G + T IG+L+A L
Sbjct: 470 IQEMPMEPNERVWGALL---------------------GACRVHSNTDIGLLAADKLFQL 508
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
E ++ ++ +Y + E + +++ GL
Sbjct: 509 APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 544
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 212/582 (36%), Positives = 336/582 (57%), Gaps = 24/582 (4%)
Query: 8 QAQIFQIGLQQNPETLNKL-MVFCTHPSHGNLLYAEKIF------GSIQSPCLLAYNLLI 60
A++ + G+ +N ++ + F P +A +F G ++ P L +N +I
Sbjct: 2 HARLIKTGIIKNSNLTTRIVLAFAASPRPYLAEFARFVFHEYHYGGEVEDPYL--WNAMI 59
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K+ + R++LLLF + E GV D F+ V KA LG VK G ++HG++ KTGL
Sbjct: 60 KSHSHGTDPRRALLLFCLMLEIGVPVDKFSLSLVMKACSRLGFVKGGLQIHGFLKKTGLW 119
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D ++ N ++ +Y G + +++FD MP +D VS+N I G+VKC E A ++F
Sbjct: 120 SDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELF--- 176
Query: 181 RQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDMYCKCG 238
+LMP E ++S S + G +I + E+ E I N+++D Y K G
Sbjct: 177 ----DLMPREMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNSMIDGYVKHG 232
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ +A++LFD +P ++V+ W +M+ GY G + +A+ LFD+ P RD+V + +M+ GYVQ
Sbjct: 233 RIEDAKDLFDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQ 292
Query: 299 FNRFD-EAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
NRF EA+ +F +M+ L PD+ LV +L+ AQLG L + +H YI E + +
Sbjct: 293 -NRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGG 351
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ ALI+MY+KCG I+ A+ +F + K W ++I GLA++G A ++ Q+
Sbjct: 352 KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERR 411
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
KPDDITF+GVL+ACSH GLV EG F M ++I+P+L+HYGC++D+L R+G ++
Sbjct: 412 SIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 471
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A+ LI ++P E N++I + L+AC + + GE +A L + S + LL+N+
Sbjct: 472 AKNLIEEMPIEPNDVI---WRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNM 528
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
YAS W+DV VR MKE + K+PGCS IE++G +HEF V
Sbjct: 529 YASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGXVHEFFV 570
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 317/557 (56%), Gaps = 34/557 (6%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F +I+ P ++ ++ LI ++G +S+ LF +R P+ +T + A G
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
++ G+ +H V K G E D V N+++ MY G + + KL++ M D+D++SWN +SG
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG 490
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT 223
C ++ + +F M + +P+ T +S L +C+ L ++ G+++H +I
Sbjct: 491 LHDCGMYDRPLTIFYHMLEE-GFIPNMYTFISILGSCSCLFDVHYGRQVHAHI------- 542
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ +++ + N +C T+++ Y C LE A F+R V
Sbjct: 543 ----------------------IKNQLDDNNFVC-TALIDMYAKCMYLEDADVAFNRLSV 579
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
RD+ WT +I Y Q N+ ++A+ FR+MQ +KP++F L L+GC+ L +LE G+ +
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H + ++ D V +AL++MYAKCG +E+A +F L +D +W +IICG A NG+
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
NKAL F M+ G PD +TF G+LSACSH GLV+EG+ FN+M + I P ++H C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++D+LGR G DE E+ I+K+ N +I + +L A +++ N+ +GEK A L +++
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALI---WETVLGASKMHNNLVLGEKAANKLFELQ 816
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
++ S + LL+NI+A+ RW+DV VR M GV+K PGCS +E NG +H F+ D SH
Sbjct: 817 PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSH 876
Query: 584 SEMKEIYSMLDRMAKTL 600
+++EI+ LD + + L
Sbjct: 877 PQIQEIHLKLDELDREL 893
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/572 (23%), Positives = 252/572 (44%), Gaps = 85/572 (14%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
YA + + ++++ LI+ +G S+ LF +++ G+ P+ FT KA
Sbjct: 165 YARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACS 224
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
+ G+++H K GL D +V ++++D+Y G+I K+F MP+++ V+WNV
Sbjct: 225 LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNV 284
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ- 218
++G+ + + +F M + ++ +E T+ + L C KNL+ G+ IH I +
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMME-LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
E +G L+DMY KCG +A +F +
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI---------------------------- 375
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+ P DIV+W+A+I Q + +E++ LF M++ P+++ + +LL+ G L+
Sbjct: 376 -KKP--DIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ IH + + D V+ AL+ MY K G + +++ + ++D SW + + GL
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
G ++ L +F M+ G P+ TFI +L +CS
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS------------------------- 527
Query: 459 EHYGCLIDL-LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
CL D+ GR +I+ ++NN + L + + C + D+
Sbjct: 528 ----CLFDVHYGR----QVHAHIIKNQLDDNNFVCTALID-MYAKCMYLEDADVA----- 573
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK--------VPGCS---S 566
++ +D T++ YA N+ E N ++M++ GV+ + GCS S
Sbjct: 574 -FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLAS 632
Query: 567 IEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
+E +H + S+M +++D AK
Sbjct: 633 LEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 214/426 (50%), Gaps = 15/426 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ I A +++ G + + N L+ + +G + K++ S+ L+++N +
Sbjct: 435 QSIHACVWKYGFETDVAVSNALVTM--YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G + + L +F + E G P+ +T+ + + L +V G +VH +++K L+ + +
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
VC +++DMY + + F+ + +D+ +W V I+ + + + E A++ FR+M+Q
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQE- 611
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEA 243
+ P+E T+ LS C++L +LE G+++H + + + + +G+AL+DMY KCGC+ EA
Sbjct: 612 GVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKA----RDLFDRSPVRDIVLWTAMINGYVQF 299
LF+ + ++ I W +++ GY GQ KA R + D D V +T +++
Sbjct: 672 EALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQ 731
Query: 300 NRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+E F M + + P ++ ++G ++ + +I + +++ +A++
Sbjct: 732 GLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDE---LEDFIQKMQLSQNALI 788
Query: 359 ATALI---EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
++ +M+ L EKA +EL+ ++ +S+ + A G+ + + S M S
Sbjct: 789 WETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSS 848
Query: 416 GGAKPD 421
G K +
Sbjct: 849 KGVKKE 854
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 166/337 (49%), Gaps = 33/337 (9%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+ +HG +VK + D+++ S++++Y + + +MPD+DVVSW I G V
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
D++ +F+ M Q +MP+E T+ + L AC+ L+LGK++H + L
Sbjct: 191 EGFANDSIYLFQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLF 249
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+G+AL+D+Y KC G++E A +F P ++
Sbjct: 250 VGSALVDLYAKC-------------------------------GEIELASKMFIGMPEQN 278
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
V W ++NGY Q + LF M + +K ++F L +L GCA L+QG+ IH
Sbjct: 279 DVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHS 338
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
I + + + L++MY+KCGL A+ +F +++ D W+++I L G+ +
Sbjct: 339 LIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEE 398
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+++LF M G P+ T +LSA ++ G + G+
Sbjct: 399 SIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 138/270 (51%), Gaps = 9/270 (3%)
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
N + W S+V+ Y C AR + + P RD+V WTA+I G V ++++ LF+E
Sbjct: 144 NPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
MQ + P++F L L C+ AL+ GK +H + + +D V +AL+++YAKCG
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IE A ++F + E++ +W ++ G A G + L+LF M+ K ++ T VL
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 432 CSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGC-LIDLLGRAGLLDEAEELIRKIPNENN 489
C++ + +G+ + + + Y+ E GC L+D+ + GL +A + + I +
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGN---EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD- 379
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ ++ AL++ G + KL L+
Sbjct: 380 ---IVVWSALITCLDQQGQSEESIKLFHLM 406
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L CA +L K IHG I ++ I D+ + +L+ +YAKC A + ++ ++
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D SWT++I GL G N ++ LF +M + G P++ T L ACS +D G++
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 446 NTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAEELIRKIPNENN 489
+ +++ L+ + L+DL + G ++ A ++ +P +N+
Sbjct: 237 ---AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 317/557 (56%), Gaps = 34/557 (6%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F +I+ P ++ ++ LI ++G +S+ LF +R P+ +T + A G
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
++ G+ +H V K G E D V N+++ MY G + + KL++ M D+D++SWN +SG
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG 490
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT 223
C ++ + +F M + +P+ T +S L +C+ L ++ G+++H +I
Sbjct: 491 LHDCGMYDRPLTIFYHMLEE-GFIPNMYTFISILGSCSCLFDVHYGRQVHAHI------- 542
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ +++ + N +C T+++ Y C LE A F+R V
Sbjct: 543 ----------------------IKNQLDDNNFVC-TALIDMYAKCMYLEDADVAFNRLSV 579
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
RD+ WT +I Y Q N+ ++A+ FR+MQ +KP++F L L+GC+ L +LE G+ +
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H + ++ D V +AL++MYAKCG +E+A +F L +D +W +IICG A NG+
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
NKAL F M+ G PD +TF G+LSACSH GLV+EG+ FN+M + I P ++H C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++D+LGR G DE E+ I+K+ N +I + +L A +++ N+ +GEK A L +++
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALI---WETVLGASKMHNNLVLGEKAANKLFELQ 816
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
++ S + LL+NI+A+ RW+DV VR M GV+K PGCS +E NG +H F+ D SH
Sbjct: 817 PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSH 876
Query: 584 SEMKEIYSMLDRMAKTL 600
+++EI+ LD + + L
Sbjct: 877 PQIQEIHLKLDELDREL 893
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 229/484 (47%), Gaps = 42/484 (8%)
Query: 5 KQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
KQ+ AQ F++GL + L L C G + A K+F + + +N+L+
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKC-----GEIELASKMFIGMPEQNDVTWNVLLN 287
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A++G L LF + E V + FT V K +K+G+ +H ++K G E
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ ++ ++DMY G + +F + D+V W+ I+ + + E+++ +F MR
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR 407
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCL 240
G + +P++ T+ S LSA T NL+ G+ IH + E + NAL+ MY K GC+
Sbjct: 408 LG-DTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCV 466
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ +L++ M ++++I W + +SG +CG
Sbjct: 467 HDGTKLYESMVDRDLISWNAYLSGLHDCGM------------------------------ 496
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+D + +F M P+ + +++L C+ L + G+ +H +I +N++ + V T
Sbjct: 497 -YDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCT 555
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MYAKC +E A F L +D +WT II A + KAL F QM G KP
Sbjct: 556 ALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKP 615
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
++ T G LS CS ++ G++ + + + + L+D+ + G ++EAE L
Sbjct: 616 NEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG-SALVDMYAKCGCMEEAEAL 674
Query: 481 IRKI 484
+
Sbjct: 675 FEAL 678
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/572 (23%), Positives = 252/572 (44%), Gaps = 85/572 (14%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
YA + + ++++ LI+ +G S+ LF +++ G+ P+ FT KA
Sbjct: 165 YARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACS 224
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
+ G+++H K GL D +V ++++D+Y G+I K+F MP+++ V+WNV
Sbjct: 225 LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNV 284
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ- 218
++G+ + + +F M + ++ +E T+ + L C KNL+ G+ IH I +
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMME-LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
E +G L+DMY KCG +A +F +
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI---------------------------- 375
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+ P DIV+W+A+I Q + +E++ LF M++ P+++ + +LL+ G L+
Sbjct: 376 -KKP--DIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ IH + + D V+ AL+ MY K G + +++ + ++D SW + + GL
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
G ++ L +F M+ G P+ TFI +L +CS
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS------------------------- 527
Query: 459 EHYGCLIDL-LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
CL D+ GR +I+ ++NN + L + + C + D+
Sbjct: 528 ----CLFDVHYGR----QVHAHIIKNQLDDNNFVCTALID-MYAKCMYLEDADVA----- 573
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK--------VPGCS---S 566
++ +D T++ YA N+ E N ++M++ GV+ + GCS S
Sbjct: 574 -FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLAS 632
Query: 567 IEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
+E +H + S+M +++D AK
Sbjct: 633 LEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 214/426 (50%), Gaps = 15/426 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ I A +++ G + + N L+ + +G + K++ S+ L+++N +
Sbjct: 435 QSIHACVWKYGFETDVAVSNALVTM--YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G + + L +F + E G P+ +T+ + + L +V G +VH +++K L+ + +
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
VC +++DMY + + F+ + +D+ +W V I+ + + + E A++ FR+M+Q
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQE- 611
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEA 243
+ P+E T+ LS C++L +LE G+++H + + + + +G+AL+DMY KCGC+ EA
Sbjct: 612 GVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKA----RDLFDRSPVRDIVLWTAMINGYVQF 299
LF+ + ++ I W +++ GY GQ KA R + D D V +T +++
Sbjct: 672 EALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQ 731
Query: 300 NRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+E F M + + P ++ ++G ++ + +I + +++ +A++
Sbjct: 732 GLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDE---LEDFIQKMQLSQNALI 788
Query: 359 ATALI---EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
++ +M+ L EKA +EL+ ++ +S+ + A G+ + + S M S
Sbjct: 789 WETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSS 848
Query: 416 GGAKPD 421
G K +
Sbjct: 849 KGVKKE 854
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 166/337 (49%), Gaps = 33/337 (9%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+ +HG +VK + D+++ S++++Y + + +MPD+DVVSW I G V
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
D++ +F+ M Q +MP+E T+ + L AC+ L+LGK++H + L
Sbjct: 191 EGFANDSIYLFQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLF 249
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+G+AL+D+Y KC G++E A +F P ++
Sbjct: 250 VGSALVDLYAKC-------------------------------GEIELASKMFIGMPEQN 278
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
V W ++NGY Q + LF M + +K ++F L +L GCA L+QG+ IH
Sbjct: 279 DVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHS 338
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
I + + + L++MY+KCGL A+ +F +++ D W+++I L G+ +
Sbjct: 339 LIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEE 398
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+++LF M G P+ T +LSA ++ G + G+
Sbjct: 399 SIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 138/270 (51%), Gaps = 9/270 (3%)
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
N + W S+V+ Y C AR + + P RD+V WTA+I G V ++++ LF+E
Sbjct: 144 NPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
MQ + P++F L L C+ AL+ GK +H + + +D V +AL+++YAKCG
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IE A ++F + E++ +W ++ G A G + L+LF M+ K ++ T VL
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 432 CSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGC-LIDLLGRAGLLDEAEELIRKIPNENN 489
C++ + +G+ + + + Y+ E GC L+D+ + GL +A + + I +
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGN---EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD- 379
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ ++ AL++ G + KL L+
Sbjct: 380 ---IVVWSALITCLDQQGQSEESIKLFHLM 406
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 10/218 (4%)
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L CA +L K IHG I ++ I D+ + +L+ +YAKC A + ++ ++
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D SWT++I GL G N ++ LF +M + G P++ T L ACS +D G++
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 446 NTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+ +++ L+ + L+DL + G ++ A ++ +P +N+ + LL+
Sbjct: 237 ---AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND----VTWNVLLNGY 289
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
G+V KL + +++ K + F TL + AN
Sbjct: 290 AQRGDVTGVLKLFCSMMELDVKCNEF-TLTTVLKGCAN 326
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 218/623 (34%), Positives = 335/623 (53%), Gaps = 68/623 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL--------------------- 74
GNL A K+F + +++ LI F K G R+S+
Sbjct: 101 GNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYV 160
Query: 75 ----------LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
LF KL E V P+ T+ V +A LG+ G V G +VKTG E D
Sbjct: 161 QNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLA 220
Query: 125 VCNS-------------------------------IMDMYGVLGKICNVKKLFDEMPDKD 153
V NS I+D+Y + ++ +++FDEMP ++
Sbjct: 221 VSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRN 280
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
VSW+ I+ + + E+++ +F RM Q P+ S LSA +++ L+ G IH
Sbjct: 281 EVSWSAMIARYCQSGYPEESLRLFCRMIQE-GFKPNISCFSSILSALASVEALQAGMNIH 339
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
++ + E + ++L+DMYCKCG + R LFD + KN++ W +MV GY G +E
Sbjct: 340 GHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHME 399
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+A+ LF+ PVR+ V W+A+I G++ +FDE +F EM ++ P+K +LL CA
Sbjct: 400 EAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACA 459
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
+L++GK +HG I + I D V TAL +MYAK G IE + ++F + +K+ SWT+
Sbjct: 460 STASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTA 519
Query: 393 IICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+I GLA +G ++L LF +M + P+++ F+ VL ACSH GLVD+G +FN+M V
Sbjct: 520 MIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAV 579
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
Y ++PK H+ C++D+L RAG L EAEE I +P + + ALLS C+ Y N ++
Sbjct: 580 YGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPE---TNAWAALLSGCKTYKNEEL 636
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
E++A L ++ K+ + + LL+NIYASA RW DV VR+ MK G++K GCS +EI
Sbjct: 637 AERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRD 696
Query: 572 IIHEFLVGDPSHSEMKEIYSMLD 594
+H F D +HS+ EIY +L+
Sbjct: 697 RVHSFYSEDGAHSQSAEIYEILE 719
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 223/492 (45%), Gaps = 67/492 (13%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
L+K +G R L + L + G+S + Y + + +L K E + K
Sbjct: 27 LLKNLTNQGLIRDGSALHAHLFKTGISSEQ--YISIKLLIMYLNYRKSAEA--DQISKDF 82
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
FD V N ++ G + +KLFDEMP + +SW ISG +K R +++ F
Sbjct: 83 DGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFE 142
Query: 179 R----------------MRQG--------------CNLMPDEGTVVSTLSACTALKNLEL 208
R ++ G + P++ T S + AC L + L
Sbjct: 143 RNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGL 202
Query: 209 GKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G + I + E + N+L+ + + G + ARE+FD M K+V+ WT+++ YV
Sbjct: 203 GMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVE 262
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+L +AR +FD P R+ V W+AMI Y Q +E++ LF M KP+ ++
Sbjct: 263 MDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSI 322
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+ A + AL+ G IHG++ + D V+++LI+MY KCG + +F + EK+
Sbjct: 323 LSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNM 382
Query: 388 ASWTSIICGLAMNGKINKA-------------------------------LELFSQMISG 416
SW +++ G ++NG + +A E+F++MI
Sbjct: 383 VSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILL 442
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G P+ TF +L AC+ +D+G+ + ++ IQ L D+ ++G ++
Sbjct: 443 GEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKL-GIQCDTYVGTALTDMYAKSGDIES 501
Query: 477 AEELIRKIPNEN 488
++++ ++P +N
Sbjct: 502 SKKVFNRMPKKN 513
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 181/430 (42%), Gaps = 103/430 (23%)
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
F ++ N ++ + G L EAR+LFDEMP N I WT+++SG++ G++ ++ F+R+
Sbjct: 85 FDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERN 144
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P +++V WTA I+GYVQ EA+ LF ++ +KP+K +++ CA LG G
Sbjct: 145 PFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGM 204
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI-------- 393
+ G I + D V+ +LI + + G I A E+F + EKD SWT+I
Sbjct: 205 SVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMD 264
Query: 394 -----------------------ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
I +G ++L LF +MI G KP+ F +LS
Sbjct: 265 ELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILS 324
Query: 431 ACS-----------HG------------------------GLVDEGRRFFNTMTEVYQIQ 455
A + HG G +GR F+T+ E +
Sbjct: 325 ALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVS 384
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN------------------------NEI 491
+ ++ G ++EA+ L +P N NE+
Sbjct: 385 -----WNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEM 439
Query: 492 I----VP---LYGALLSACRIYGNVDMGEKLAALLEKIESK-DSSFHTLLANIYASANRW 543
I +P + +LL AC ++D G+ L + K+ + D+ T L ++YA +
Sbjct: 440 ILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDI 499
Query: 544 EDVTNVRQKM 553
E V +M
Sbjct: 500 ESSKKVFNRM 509
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 3/233 (1%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G++ A+ +F + ++++ +I F + +F+++ G P+ T+ +
Sbjct: 395 NGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSL 454
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A + KG+ +HG +VK G++ DTYV ++ DMY G I + KK+F+ MP K+
Sbjct: 455 LCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNE 514
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSW I G + E+++ +F M + ++ P+E ++ L AC+ ++ G
Sbjct: 515 VSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFN 574
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
+ P + ++DM + G L EA E MP W +++SG
Sbjct: 575 SMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSG 627
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/563 (35%), Positives = 320/563 (56%), Gaps = 35/563 (6%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F + + +N +I + + G+F+++L F +R G P++ T + L +
Sbjct: 163 LFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+ +G ++H ++ +G D+++ ++++DMYG G + ++F++MP K VV+WN ISG
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISG 282
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEF 222
+ + +F+RM + P T+ S + C+ L GK +H Y I ++
Sbjct: 283 YGLKGDSISCIQLFKRMYNE-GVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQS 341
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ ++L+D+Y KC G++E A ++F P
Sbjct: 342 DVFINSSLMDLYFKC-------------------------------GKVELAENIFKLIP 370
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+V W MI+GYV + EA+ LF EM+ ++PD ++LT C+QL ALE+G+
Sbjct: 371 KSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEE 430
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH I E ++ + VV AL++MYAKCG +++A +F L ++D SWTS+I +G+
Sbjct: 431 IHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQ 490
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
ALELF++M+ KPD +TF+ +LSAC H GLVDEG +FN M VY I P++EHY
Sbjct: 491 AYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYS 550
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
CLIDLLGRAG L EA E++++ P ++ V L L SACR++ N+D+G ++A L
Sbjct: 551 CLIDLLGRAGRLHEAYEILQQNPEIRDD--VELLSTLFSACRLHRNIDLGAEIARTLIDK 608
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
+ DSS + LL+N+YASA++W++V VR KMKE+G++K PGCS IEIN I F V D S
Sbjct: 609 DPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNS 668
Query: 583 HSEMKEIYSMLDRMAKTLLDSKQ 605
H ++ ++ L ++ + D +
Sbjct: 669 HLHLELVFKCLSYLSDHMEDESK 691
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 253/498 (50%), Gaps = 52/498 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNP---ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA-Y 56
+ Q K I ++ +GLQ + + L L + C H A+ +F ++++PC ++ +
Sbjct: 19 LKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDH-----AKCVFDNMENPCEISLW 73
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
N L+ + K + ++L LF KL + PD++TYP V KA G L + G+ +H +V
Sbjct: 74 NGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLV 133
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
KTGL D V +S++ MY LF+EMP+KDV WN IS + + F++A++
Sbjct: 134 KTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALE 193
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMY 234
F MR+ P+ T+ + +S+C L +L G EIH IN + +AL+DMY
Sbjct: 194 YFGLMRRF-GFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMY 252
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KCG L A E+F++MP K V+ W SM+SGY G LF R
Sbjct: 253 GKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKR-------------- 298
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
++E V KP L +L+ C++ L +GK++HGY NRI
Sbjct: 299 ------MYNEGV-----------KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQS 341
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D + ++L+++Y KCG +E A IF + + SW +I G GK+ +AL LFS+M
Sbjct: 342 DVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMR 401
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----YGCLIDLLGR 470
+PD ITF VL+ACS +++G N + I+ KL++ G L+D+ +
Sbjct: 402 KSYVEPDAITFTSVLTACSQLAALEKGEEIHNLI-----IEKKLDNNEVVMGALLDMYAK 456
Query: 471 AGLLDEAEELIRKIPNEN 488
G +DEA + + +P +
Sbjct: 457 CGAVDEAFSVFKCLPKRD 474
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 206/422 (48%), Gaps = 41/422 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F + ++A+N +I + KG + LF ++ GV P T +
Sbjct: 256 GHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLI 315
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ +G+ VHGY ++ ++ D ++ +S+MD+Y GK+ + +F +P VV
Sbjct: 316 MVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVV 375
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWNV ISG+V + +A+ +F MR+ + PD T S L+AC+ L LE G+EIH
Sbjct: 376 SWNVMISGYVAEGKLFEALGLFSEMRKS-YVEPDAITFTSVLTACSQLAALEKGEEIHNL 434
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I ++L+ ++ ALLDMY KCG + EA +F +P ++++ WTSM++ Y + GQ
Sbjct: 435 IIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQ---- 490
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
YV A+ LF EM +KPD+ +A+L+ C
Sbjct: 491 --------------------AYV-------ALELFAEMLQSNMKPDRVTFLAILSACGHA 523
Query: 335 GALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY---ELREKDAASW 390
G +++G + + +N I + LI++ + G + +A EI E+R+ D
Sbjct: 524 GLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRD-DVELL 582
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDD-ITFIGVLSACSHGGLVDEGRRFFNTMT 449
+++ ++ I+ E+ +I PDD T+I + + + DE R + M
Sbjct: 583 STLFSACRLHRNIDLGAEIARTLID--KDPDDSSTYILLSNMYASAHKWDEVRVVRSKMK 640
Query: 450 EV 451
E+
Sbjct: 641 EL 642
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 51/311 (16%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
D ++ L AC K+L+ GK IH + + L+ + L+++Y C A+ +F
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D M N C S+ W ++ GY + + EA+
Sbjct: 62 DNMENP---CEISL---------------------------WNGLMAGYTKNYMYVEALE 91
Query: 308 LFRE-MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
LF + + LKPD + ++L C L GK IH + + + +D VV ++L+ MY
Sbjct: 92 LFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMY 151
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKC EKA+ +F E+ EKD A W ++I +G +ALE F M G +P+ +T
Sbjct: 152 AKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTIT 211
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG---------CLIDLLGRAGLLDEA 477
+S+C+ L+D R +I +L + G L+D+ G+ G L+ A
Sbjct: 212 TAISSCAR--LLDLNRGM--------EIHEELINSGFLLDSFISSALVDMYGKCGHLEMA 261
Query: 478 EELIRKIPNEN 488
E+ ++P +
Sbjct: 262 IEVFEQMPKKT 272
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/508 (37%), Positives = 304/508 (59%), Gaps = 21/508 (4%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK--ICNVKKLFDEMPDKDVVSWNVSISG-- 163
+++H + +KTG ++ + + I +K F ++ + SWN I
Sbjct: 32 KQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRALA 91
Query: 164 --------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
HV + +A+ F M + P++ T L AC L +E GK++H +
Sbjct: 92 DSDDDDLFHVNSL---EALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGF 148
Query: 216 INQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEK 273
+ + L + + L+ +Y CG + +A LF + NV+ W M+ GYV G L
Sbjct: 149 VVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRA 208
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
+R+LFD P + +V W MI+G Q F EA+ +F +MQ+ + P+ LV++L ++
Sbjct: 209 SRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSR 268
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTS 392
LGA+E GKW+H + +N I +D V+ +ALI+MY+KCG I+KA+++F +R +K+ +W++
Sbjct: 269 LGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSA 328
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
II GLAM+G+ AL+ F +M G P D+ +IGVLSACSH GLV+EGR + M +
Sbjct: 329 IIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIV 388
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
+ P++EHYGC++DLLGRAG L+EAE+LI +P + +++I+ ALL AC+++GN++MG
Sbjct: 389 GLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILK---ALLGACKMHGNIEMG 445
Query: 513 EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGI 572
E++A +L DS + L+N++AS WE V VR KMKE+ +RK PGCS IE++G+
Sbjct: 446 ERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGV 505
Query: 573 IHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
IHEFLV D SH + I+SML+ M+ L
Sbjct: 506 IHEFLVEDDSHPRAEGIHSMLEEMSDRL 533
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 219/492 (44%), Gaps = 107/492 (21%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
LKQI A + G +P +L+ F T + + YA K F I P ++N +I+A
Sbjct: 30 HLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRA 89
Query: 63 FAKKGSFR-------KSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
A ++LL FS + G V P+ FT+P V KA L +++G+++HG+V
Sbjct: 90 LADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFV 149
Query: 115 VKTGLEFDTYV--------------------------------CNSIMDMYGVLGKICNV 142
VK GL D +V N ++D Y +G +
Sbjct: 150 VKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRAS 209
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
++LFD MP+K VVSWNV ISG + F++A+++F M+ G ++ P+ T+VS L A +
Sbjct: 210 RELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLG-DVPPNYVTLVSVLPAVSR 268
Query: 203 LKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN-KNVICWTS 260
L +ELGK +H + + E+E ++G+AL+DMY KCG + +A ++F+ + N KN I W++
Sbjct: 269 LGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSA 328
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
++ G G +ARD D F MQ + P
Sbjct: 329 IIGGLAMHG---RARDALDH----------------------------FWRMQQAGVTPS 357
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+ + +L+ C+ G +E+G+ I+ ++ V+ V IE Y
Sbjct: 358 DVVYIGVLSACSHAGLVEEGRSIYYHM------VNIVGLLPRIEHYG------------- 398
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
C + + G+ E +++ KPDD+ +L AC G ++
Sbjct: 399 --------------CMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEM 444
Query: 441 GRRFFNTMTEVY 452
G R + Y
Sbjct: 445 GERIAKILMGWY 456
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 275/419 (65%), Gaps = 4/419 (0%)
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLS 241
G + P++ T+ + + AC ++ +LE GK+ H YI E ++ AL+ MY +CG L
Sbjct: 3 GKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLE 62
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+A +FD+M ++ W +M++G+ ++KA LF RD+V WTA+I GY Q
Sbjct: 63 DAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGY 122
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
DE++ +F +M+ +K D+FI+ ++L+ CA L ALE G+ H Y+ ++ +D VV +A
Sbjct: 123 GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MYAK G +E A ++F ++ +++ SW SII G A +G+ N A+ LF QM+ G KP+
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+I+F+GVLSACSH GLV+EGR +FN MT+ Y I P + HY C+IDLLGRAG LDEAE I
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P E + V ++GALL ACRI+GN ++ +++A L +E + + + LL+NIYA+A
Sbjct: 303 NGMPVEPD---VSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAG 359
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+W+D VR+ MK+ GV K PG S IE+ I+H F+ G+ SH ++KEI+ L+ +++ +
Sbjct: 360 QWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKM 418
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 170/367 (46%), Gaps = 66/367 (17%)
Query: 82 RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICN 141
+GV P+ FT V KA + +++G++ H Y++K G E D V +++ MY G + +
Sbjct: 4 KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63
Query: 142 VKKLFDEMPDKDVVSWNVSISGHV------KCMRF------------------------- 170
+FD+M ++ +WN I+GH K ++
Sbjct: 64 AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNA 229
+++++VF +MR+ + D + S LSAC L LELG++ H Y+ Q ++G+A
Sbjct: 124 DESLNVFNQMRK-TGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
L+DMY K G + +A ++FD+MP +N + W S+++G C
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITG---C--------------------- 218
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
Q R ++AV LF +M +KP++ V +L+ C+ G + +G+ + +
Sbjct: 219 -------AQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQ 271
Query: 350 NR-ITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKAL 407
N I D T +I++ + G +++A + E D + W +++ ++G A
Sbjct: 272 NYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAK 331
Query: 408 ELFSQMI 414
+ ++
Sbjct: 332 RIAEHLL 338
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 154/311 (49%), Gaps = 9/311 (2%)
Query: 9 AQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGS 68
+F +++ T N ++ H + ++ A K+F + ++++ +I +A+ G
Sbjct: 65 GHVFDKMSERSTRTWNAMIT--GHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGY 122
Query: 69 FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
+SL +F+++R+ G+ D F V A L ++ G + H YVV++G D V ++
Sbjct: 123 GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
++DMY G + + ++FD+MP ++ VSWN I+G + R DAV +F +M Q + P
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQA-GIKP 241
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEAREL 246
+E + V LSAC+ + G+ + Q P + + ++D+ + GCL EA
Sbjct: 242 NEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENF 301
Query: 247 FDEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDR---SPVRDIVLWTAMINGYVQFNRF 302
+ MP +V W +++ G E A+ + + V+ ++ + N Y ++
Sbjct: 302 INGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQW 361
Query: 303 DEAVALFREMQ 313
D+A + + M+
Sbjct: 362 DDAAKVRKLMK 372
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 226/638 (35%), Positives = 343/638 (53%), Gaps = 83/638 (13%)
Query: 34 SHGNLLYAEKIFGSIQSPC-LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP 92
S G L +IF I S + +NL++ +AK G +R+S+ LF K+++ G++ +++T+
Sbjct: 498 SCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFS 557
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
+ K LG V + +++HG V K G V NS++ Y G++ + KLFDE+ D+
Sbjct: 558 CILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDR 617
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRM---RQGCNLMPDEGTVVSTLSACTALKNLELG 209
DVVSWN ISG V A++ F +M R G +L T+V++++AC + +L LG
Sbjct: 618 DVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDL----ATLVNSVAACANVGSLSLG 673
Query: 210 KEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA-----------------------RE 245
+ +H + + + N LLDMY KCG L++A RE
Sbjct: 674 RALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVRE 733
Query: 246 --------LFDEMPNKNV--------------ICWTSMVSG------------------- 264
LF EM +K V C S+ G
Sbjct: 734 GLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVS 793
Query: 265 ------YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
Y CG +E+A +F + PV+DIV W MI GY + + +EA+ LF EMQ +
Sbjct: 794 NALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK-ESR 852
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
PD + LL C L ALE G+ IHG I N + + VA ALI+MY KCG + A +
Sbjct: 853 PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLL 912
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
F + EKD +WT +I G M+G N+A+ F +M G KPD+ITF +L ACSH GL+
Sbjct: 913 FDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLL 972
Query: 439 DEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
+EG FFN+M ++PKLEHY C++DLL R G L +A LI +P + + I +GA
Sbjct: 973 NEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATI---WGA 1029
Query: 499 LLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
LL CRI+ +V++ EK+A + ++E ++ ++ LLANIYA A +WE+V +R+++ + G+
Sbjct: 1030 LLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGL 1089
Query: 559 RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+K PGCS IE+ G F+ D +H + K I+S+L+ +
Sbjct: 1090 KKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNL 1127
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 200/435 (45%), Gaps = 39/435 (8%)
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
L N I F + G R ++ L ++ + D Y + + +++G+ VH
Sbjct: 419 LDENTKICKFCEVGDLRNAVELLRMSQKSEL--DLNAYSSILQLCAEHKCLQEGKMVHSV 476
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE-MPDKDVVSWNVSISGHVKCMRFED 172
+ G+ + + ++ MY G + +++FD + D V WN+ +S + K + +
Sbjct: 477 ISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRE 536
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNAL 230
++ +F++M Q + + T L L + K IH + +L F + N+L
Sbjct: 537 SIYLFKKM-QKLGITGNSYTFSCILKCFATLGRVGECKRIHGCV-YKLGFGSYNTVVNSL 594
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+ Y K G + A +LFDE+ +++V+ W SM+SG V
Sbjct: 595 IATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCV------------------------ 630
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
+NG+ A+ F +M I+R+ D LV + CA +G+L G+ +HG +
Sbjct: 631 --MNGFSH-----SALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKA 683
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ + + L++MY+KCG + A++ F ++ +K SWTS+I G + A+ LF
Sbjct: 684 CFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLF 743
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M S G PD + VL AC+ G +D+GR N + + + L L+D+ +
Sbjct: 744 YEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRK-NNMALCLPVSNALMDMYAK 802
Query: 471 AGLLDEAEELIRKIP 485
G ++EA + +IP
Sbjct: 803 CGSMEEAYLVFSQIP 817
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 169/384 (44%), Gaps = 40/384 (10%)
Query: 174 VDVFRR-MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD 232
+DV R R G DE T + L+N E+ R ++Q+ E +++L
Sbjct: 404 LDVPRSSTRVGAFAKLDENTKICKFCEVGDLRN---AVELLR-MSQKSELDLNAYSSILQ 459
Query: 233 MYCKCGCLSEARELFDEMPNKNV----ICWTSMVSGYVNCGQLEKARDLFDRSPVRD-IV 287
+ + CL E + + + + + + +V YV+CG L + R +FD + +
Sbjct: 460 LCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVF 519
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
LW M++ Y + + E++ LF++MQ + + + + +L A LG + + K IHG +
Sbjct: 520 LWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCV 579
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ V +LI Y K G ++ A ++F EL ++D SW S+I G MNG + AL
Sbjct: 580 YKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSAL 639
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR---------------FFNTMTEVY 452
E F QM+ D T + ++AC++ G + GR F NT+ ++Y
Sbjct: 640 EFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMY 699
Query: 453 QI---------------QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
Q + + LI R GL D+A L ++ ++ V
Sbjct: 700 SKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMT 759
Query: 498 ALLSACRIYGNVDMGEKLAALLEK 521
++L AC ++D G + + K
Sbjct: 760 SVLHACACGNSLDKGRDVHNYIRK 783
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 347/612 (56%), Gaps = 21/612 (3%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQ-SPCLLAYNLLIK 61
Q KQ+ AQI + L + +++L+ F NL A+ +F + +P + YN +I
Sbjct: 49 QFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMIS 108
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LE 120
A + S + L+S + VSPD T+ ++ KA +L EVK+ +H +++ +G L
Sbjct: 109 AVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLS 163
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
Y+ NS++ Y LG +K+F MP DV S+NV I G+ K +A+ ++ +M
Sbjct: 164 LGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM 223
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE---LEFTPIMGNALLDMYCKC 237
+ PDE TV+S L C L ++ LGK +H +I + I+ NALLDMY KC
Sbjct: 224 VSD-GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKC 282
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
A+ FD M K++ W +MV G+V G +E A+ +FD+ P RD+V W +++ GY
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS 342
Query: 298 QFNRFDEAV-ALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+ V LF EM I+ ++KPD+ +V+L++G A G L G+W+HG + ++ D
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
A +++ALI+MY KCG+IE+A +F EKD A WTS+I GLA +G +AL+LF +M
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G P+++T + VL+ACSH GLV+EG FN M + + P+ EHYG L+DLL RAG ++
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 476 EAEELI-RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EA++++ +K+P ++ ++G++LSACR +++ E L K+E + + LL+
Sbjct: 523 EAKDIVQKKMPMRPSQ---SMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLS 579
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD----PSHSEMKEIY 590
NIYA+ RW R+ M+ GV+K G SS+ +H F+ + P +E+K I
Sbjct: 580 NIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRIL 639
Query: 591 SMLDRMAKTLLD 602
L K LD
Sbjct: 640 QHLYNEMKPKLD 651
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/499 (38%), Positives = 297/499 (59%), Gaps = 6/499 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTY-VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+++ +++H + GL + + I Y G+ + +LFDE+P D++S+ +S
Sbjct: 33 IRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMS 92
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
H+K A+ VF + PD V LSA L + +G +H I + L+
Sbjct: 93 LHLKLDHHWKAISVFSHAIASGH-RPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLD 151
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
++ NAL+DMYC+CG AR +FD M K+ + W SM+ GY+ C ++ A F +
Sbjct: 152 SELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQM 211
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P++ V WTA+I G+VQ + +A+ LF +M + +P+ +V +L+ CA +GAL+ G+
Sbjct: 212 PMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGR 271
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
IHGY +++ T + +V AL++MYAK G I A +F E++ KDA +WT++I + G
Sbjct: 272 AIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQG 331
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
KA+ELF M+ G P+ +TF+ VLSACSH GL+ EGR F+ M EVY I P+LEHY
Sbjct: 332 NGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHY 391
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++DLLGR GLL+EAE LI + E + +I + +LLSAC +GN + E + K
Sbjct: 392 GCMVDLLGRGGLLEEAEALIDHMDVEPDIVI---WRSLLSACLAHGNDRLAEIAGMEIIK 448
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
E D + LL N+YA +NRW++ ++R++M + K PGCS IE++G++HEFLV D
Sbjct: 449 REPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVHEFLVEDK 508
Query: 582 SHSEMKEIYSMLDRMAKTL 600
+H +EIY L+ MA+ L
Sbjct: 509 THDARREIYVTLEIMARHL 527
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 194/432 (44%), Gaps = 65/432 (15%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+L++I AQ GL N ++++ +F ++ G A ++F I P ++++ L+
Sbjct: 35 ELQRIHAQALTHGLHPNQQSIS-CKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMSL 93
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
K K++ +FS G PD F A G LG+ + G VHG + + GL+ +
Sbjct: 94 HLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLDSE 153
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR- 181
VCN+++DMY GK + +FD M KD V+W + G++KC+ + A+ F +M
Sbjct: 154 LVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPM 213
Query: 182 --------------------QGCNLM---------PDEGTVVSTLSACTALKNLELGKEI 212
Q L P+ T+V LSAC + L+LG+ I
Sbjct: 214 KSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAI 273
Query: 213 HRYINQELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H Y ++ T I+ NAL+DMY K G ++ A +F+E+ K+ WT+M+S + G
Sbjct: 274 HGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNG 333
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
KA +LF W + +G + P+ V++L+ C
Sbjct: 334 RKAVELF----------WDMLRSGIL---------------------PNSVTFVSVLSAC 362
Query: 332 AQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAAS 389
+ G +++G+ + + E I ++++ + GL+E+A + + E D
Sbjct: 363 SHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVI 422
Query: 390 WTSIICGLAMNG 401
W S++ +G
Sbjct: 423 WRSLLSACLAHG 434
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 301/523 (57%), Gaps = 23/523 (4%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+KK +++H ++ G ++ ++ Y G + N K+F+ + + WN I G
Sbjct: 31 IKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRG 90
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
H + V+++ RM + P+E T + C + L G+++H R +
Sbjct: 91 HSQSETPHKLVELYNRMVEA-EAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCT 149
Query: 223 TPIMGNALLDMYCKCGC---LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ +L+++Y G + +AR +FDE+ ++N++ W S+++GYV CG ++ AR +FD
Sbjct: 150 NVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFD 209
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P R++V WT MI G Q R +A+ LF EM+ +K D+ LVA L+ CA+LG L+
Sbjct: 210 EMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKL 269
Query: 340 GKWIHGYINENRITVD----AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
G WIH YI+E + + +LI MYA CG+I+KA ++F ++++ SWTS+I
Sbjct: 270 GTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMIT 329
Query: 396 GLAMNGKINKALELFSQMISGG---AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
G A G +AL +F M G +PD ITFIGVL ACSH G VD+GR FF M + +
Sbjct: 330 GFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKW 389
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
I P++EHYGC++DLL RAG LDEA LI +P + N+ + +GALL CRI+ N ++
Sbjct: 390 GIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAV---WGALLGGCRIHKNAELA 446
Query: 513 EKLAA--LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+A LE + + + LL+N+YA+A RW+DV VRQKM E+GVRK G S ++IN
Sbjct: 447 SHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQIN 506
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDNL 613
G++H+F+ GD +H +Y ML ++ ++Q +EG L
Sbjct: 507 GVVHDFVAGDWTHKHASSVYEMLSKI------TRQAKLEGYKL 543
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 219/465 (47%), Gaps = 79/465 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LKQI QI G Q L KL+ F + + GNLL A K+F I++P +N +I
Sbjct: 31 IKKLKQIHTQIIVNGFSQKNFLLVKLLSF--YITSGNLLNAHKVFERIENPSTTVWNQMI 88
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ + K + L++++ E P+ FTY F+ +++GE+VHG VV G
Sbjct: 89 RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYC 148
Query: 121 FDTYVCNSIMDMYGVLGKICNVKK----------------------------------LF 146
+ +V S++++Y + G V+K +F
Sbjct: 149 TNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIF 208
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
DEMP+++VVSW I+G + R + A+ +F MR+ + D+ +V+ LSAC L +L
Sbjct: 209 DEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRA-GVKLDQVALVAALSACAELGDL 267
Query: 207 ELGKEIHRYINQELEF--TPI---MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+LG IH YI++ L P+ + N+L+ MY CG + +A ++F M ++ I WTSM
Sbjct: 268 KLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSM 327
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
++G+ G E+A +F ++Q DE +PD
Sbjct: 328 ITGFAKQGHAEEALGVFQ----------------WMQRLGTDEG------------RPDG 359
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFY 380
+ +L C+ G ++QG+ +N+ V + ++++ ++ G +++A +
Sbjct: 360 ITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIE 419
Query: 381 ELREK-DAASWTSIICGLAMNGKINKALELFSQMISGGA---KPD 421
+ K + A W +++ G +I+K EL S + A KPD
Sbjct: 420 SMPMKPNDAVWGALLGGC----RIHKNAELASHVAQKLALELKPD 460
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 304/532 (57%), Gaps = 19/532 (3%)
Query: 72 SLLLFSKLRERGVSP--DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
SLL S L R + NFT PF K ++H +++KT + + +
Sbjct: 6 SLLHVSPLHHRPSTHLLHNFTSPFELK------------QLHAHLLKTNSPLSSLPLSRV 53
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+ K +F + +V WN + + DA+ +F R+R+ ++ PD
Sbjct: 54 ASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLRE-FDISPD 112
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFD 248
T L AC+ L ++ GK +H Y+ + L+ + N ++ +Y CG + AR++FD
Sbjct: 113 HYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFD 172
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+MP ++VI W M++ V G E A LF P R++ WT+MI GY Q + EA+ L
Sbjct: 173 KMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDL 232
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F EM+ L P++ +VA+L CA +G L G+ IH + N + + V LI+MY K
Sbjct: 233 FLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVK 292
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
CG +E A IF + E+ SW+++I GLA +G+ AL LF++MI+ G KP+ +TFIG+
Sbjct: 293 CGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGI 352
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L ACSH G+V++GR++F +MT Y I P++EHYGC++DL RAGLL EA E I +P
Sbjct: 353 LHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAP 412
Query: 489 NEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTN 548
N ++ +GALL C+++ N+ + E+ L K++ + ++ +L+NIYA A RWEDV
Sbjct: 413 NGVV---WGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVAR 469
Query: 549 VRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
VR+ M++ GV+K PG SSI + G+++ F+ GD +H + +EI+ +++ + +
Sbjct: 470 VRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRM 521
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 220/440 (50%), Gaps = 68/440 (15%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+LKQ+ A + + + L+++ C S + YA+ IF + + + +N +++
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFNS--SFSYAKLIFQLLDASEVTHWNTCLRS 87
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
FA+ S ++ LF +LRE +SPD++T FV KA L +V+ G+ VHGYV K GL+ +
Sbjct: 88 FAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS-------------------- 162
++ N I+ +Y + G+I +K+FD+MP +DV++WN+ I+
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207
Query: 163 -----------GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
G+ +C + ++A+D+F M + L+P+E TVV+ L AC + NL LG+
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEM-EDAGLLPNEVTVVAVLVACADMGNLVLGRR 266
Query: 212 IHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH + N+ E + N L+DMY KCGCL +A +FD M + V+ W++M++G G
Sbjct: 267 IHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG- 325
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
R ++A+ALF +M +KP+ + +L
Sbjct: 326 ------------------------------RAEDALALFNKMINTGVKPNAVTFIGILHA 355
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELR-EKDAA 388
C+ +G +E+G+ + + V + +++++++ GL+++A E + +
Sbjct: 356 CSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGV 415
Query: 389 SWTSIICGLAMNGKINKALE 408
W +++ G ++ I A E
Sbjct: 416 VWGALLGGCKVHKNIKLAEE 435
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 181/488 (37%), Positives = 304/488 (62%), Gaps = 5/488 (1%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H ++++ FD + + ++ + + ++F ++ + ++ +N I G
Sbjct: 34 IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKD 93
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGN 228
+ + + + ++ L+PD T + ACT +L++G + H + I + + N
Sbjct: 94 PDKSFHFYVQSKRN-GLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQN 152
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+L+ MY G + A +F + +V+ WTSMV+GY+ G + AR LFD+ P +++V
Sbjct: 153 SLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVT 212
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W+ MI+GY + + FD+A+ L+ +Q + ++ ++V+++ CA LGALE G+ H YI
Sbjct: 213 WSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYIL 272
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
N++TV+ ++ TAL++MYA+CG I+KA+ +F +L +DA SWT++I G AM+G KALE
Sbjct: 273 RNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALE 332
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
FS+M G P +ITF VLSACSHGGLV+ G F +M Y+I+P+LEHYGC++DLL
Sbjct: 333 YFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLL 392
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG L EAE+ + ++P + N P++GALL ACRI+ N ++ E+ L +++ + S
Sbjct: 393 GRAGKLAEAEKFVNEMPMKPN---APIWGALLGACRIHKNSEIAERAGKTLIELKPEHSG 449
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
++ LL+NIYA N+WE+V N+RQ MKE GV K PG + E++G +H+F +GD +H E+++
Sbjct: 450 YYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQ 509
Query: 589 IYSMLDRM 596
I M + +
Sbjct: 510 IERMWEEI 517
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 234/489 (47%), Gaps = 64/489 (13%)
Query: 37 NLL-YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
NLL YA ++F IQ+P L YN I+ F+ KS + + + G+ PDN TYPF+
Sbjct: 61 NLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLV 120
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI---------------- 139
KA G + G + HG +++ G + D YV NS++ MY LG I
Sbjct: 121 KACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVV 180
Query: 140 ---------------CNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ +KLFD+MP+K++V+W+V ISG+ K F+ A++++ + Q
Sbjct: 181 SWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELY-FLLQSE 239
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
+ +E +VS +++C L LELG+ H YI ++ I+G AL+DMY +CG + +A
Sbjct: 240 GVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKA 299
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR------SPVRDIVLWTAMINGYV 297
+FD++P ++ + WT++++G+ G EKA + F R +P R+I +TA+++
Sbjct: 300 IWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTP-REIT-FTAVLSACS 357
Query: 298 QFNRFDEAVALFREMQI-IRLKP---DKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+ + LF M+ R++P +V LL +L E+ ++NE +
Sbjct: 358 HGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEK------FVNEMPMK 411
Query: 354 VDAVVATALI---EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+A + AL+ ++ + E+A + EL+ + + + + A K +E
Sbjct: 412 PNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWEN-VENI 470
Query: 411 SQMIS--GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
QM+ G KP T + + D+ T E+ QI+ E I L
Sbjct: 471 RQMMKERGVVKPPGYTLFEMDGKVHKFTIGDK------THPEIQQIERMWEEILGKIRLA 524
Query: 469 GRAGLLDEA 477
G G D+A
Sbjct: 525 GYTGNNDDA 533
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 147/301 (48%), Gaps = 12/301 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A K+F + L+ ++++I +AK F K++ L+ L+ GV + V
Sbjct: 193 GDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVI 252
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ LG ++ GE+ H Y+++ + + + +++DMY G I +FD++P +D +
Sbjct: 253 ASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDAL 312
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW I+G E A++ F RM + L P E T + LSAC+ +E G E+
Sbjct: 313 SWTTLIAGFAMHGYAEKALEYFSRMEKA-GLTPREITFTAVLSACSHGGLVERGLELFES 371
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG---YVNCG 269
+ ++ P + + ++D+ + G L+EA + +EMP K N W +++ + N
Sbjct: 372 MKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSE 431
Query: 270 QLEKA-RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR--LKPDKFILVA 326
E+A + L + P + + N Y + N++ E V R+M R +KP + L
Sbjct: 432 IAERAGKTLIELKPEHS-GYYVLLSNIYARTNKW-ENVENIRQMMKERGVVKPPGYTLFE 489
Query: 327 L 327
+
Sbjct: 490 M 490
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
++ L C L L K IH ++ D A+ LI + L++ A ++FY+++
Sbjct: 19 LSFLESCTTLSHL---KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQN 75
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ + S I G + + +K+ + Q G PD++T+ ++ AC+ G +D G
Sbjct: 76 PNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMG 132
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/614 (33%), Positives = 336/614 (54%), Gaps = 30/614 (4%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A + G + KL+ + G L A +F + L ++ ++
Sbjct: 79 KQVHAHTLKTGFHGHEFVETKLLQM--YGRFGCLDDANLVFVKMPQRNLYSWTAILSVHV 136
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK-------- 116
G F ++L LF KL+ + + F +P V K G L ++ G ++HG V+K
Sbjct: 137 DHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSA 196
Query: 117 ----TGLEFDTYVC-NSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMR 169
+G V N+++ Y G + K+LFD+M KD +SWN ISG+ +
Sbjct: 197 LKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLL 256
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGN 228
F++A+ +FR + + D T+ S L+AC + +L GKE+H + + + L + +G
Sbjct: 257 FDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGG 316
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR------SP 282
AL++MY KC L A+ FD + ++ W ++SGY C QLE ++L + P
Sbjct: 317 ALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEP 376
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
++ W +I+G+V+ + A+ LF EMQ L+PD + + +L CA+L + +GK
Sbjct: 377 --NVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQ 434
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H + +D + AL++MYAKCG I+ A++++ + + S +++ AM+G
Sbjct: 435 VHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGH 494
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
++ + LF M+ G +PD +TF+ VLS+C H G V+ G FF+ MT Y + P L+HY
Sbjct: 495 GDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVTPSLKHYT 553
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C++DLL RAG LDEA EL++KIP + + + ++GALL C I+GNV++GE A L ++
Sbjct: 554 CIVDLLSRAGRLDEAYELVKKIPRKPDSV---MWGALLGGCVIWGNVELGEIAAESLIEL 610
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E ++ + LLAN+YA A RW D+ RQ +K+ G+ K PGCS IE IH FL D S
Sbjct: 611 EPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKS 670
Query: 583 HSEMKEIYSMLDRM 596
H + ++IY+ LD +
Sbjct: 671 HEKTEDIYTTLDNL 684
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 214/449 (47%), Gaps = 71/449 (15%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G++VH + +KTG +V ++ MYG G + + +F +MP +++ SW +S HV
Sbjct: 78 GKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVD 137
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEG----TVVSTLSACTALKNLELGKEIHRYINQELEF 222
FE+A+ +F +++ + D G L C L+ LELG+++H + +
Sbjct: 138 HGYFEEALSLFEKLQ-----LDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIK---- 188
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+C + A ++F KNV+ + +M+ GY G +EKA++LFD+
Sbjct: 189 -------------RCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQME 235
Query: 283 V--RDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQ 339
+ +D + W +MI+GY FDEA+++FR++ + ++ D F L ++L CA + +L +
Sbjct: 236 LVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRR 295
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK +H + + V AL+EMY+KC ++ A F + E+D A+W +I G A
Sbjct: 296 GKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYAC 355
Query: 400 -----------------------------------NGKINKALELFSQMISGGAKPDDIT 424
NG AL LF++M + +PD T
Sbjct: 356 CNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYT 415
Query: 425 FIGVLSACSHGGLVDEGRRFF-NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+L AC+ + G++ +++ + Y++ + L+D+ + G + A ++ +
Sbjct: 416 VGIILPACARLATIARGKQVHAHSIRQGYELDVHIG--AALVDMYAKCGSIKHAMQVYNR 473
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMG 512
I N N + A+L+A ++G+ D G
Sbjct: 474 ISNPN----LVSQNAMLTAYAMHGHGDEG 498
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 119/331 (35%), Gaps = 81/331 (24%)
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A + ++ + D +LL C L GK +H + + V T L++
Sbjct: 46 TAAHHTHLSLLDKQIDSSTYASLLESCR---TLNLGKQVHAHTLKTGFHGHEFVETKLLQ 102
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY + G ++ A +F ++ +++ SWT+I+ +G +AL LF ++ +
Sbjct: 103 MYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFV 162
Query: 425 FIGVLSACSHGGLVDEGRRF----------------------------FNTMTEVYQIQP 456
F VL C +++ GR+ +NTM Y
Sbjct: 163 FPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENG 222
Query: 457 KLEHYGCLIDLLGRAG-----------------LLDEAEELIRKIPNENN-EIIVPLYGA 498
+E L D + G L DEA + R + E E G+
Sbjct: 223 NVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGS 282
Query: 499 LLSACR-------------------IYGNVDMGEKLAALLEKIES-------------KD 526
+L+AC ++ N +G L + K E +D
Sbjct: 283 VLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERD 342
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
++ +L + YA N+ E++ N+ QKMK G
Sbjct: 343 TATWNVLISGYACCNQLENIQNLIQKMKGDG 373
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 224/665 (33%), Positives = 358/665 (53%), Gaps = 80/665 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ + I G+ + E L +VF + + G+L+ +IF I + + +NLL+ +A
Sbjct: 77 KRVHSIISSNGMAID-EVLGAKLVF-MYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYA 134
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G++R+S+ LF K++E G+ D++T+ V K +V++ ++VHGYV+K G
Sbjct: 135 KIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNA 194
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ-G 183
V NS++ Y G++ + + LFDE+ D+DVVSWN ISG + ++ F +M G
Sbjct: 195 VVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLG 254
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
++ D T+V+ L AC + NL LG+ +H Y + + N LLDMY KCG L+
Sbjct: 255 VDV--DSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNG 312
Query: 243 ARE-------------------------------LFDEMPNKNV--------------IC 257
A E LFDEM +K + C
Sbjct: 313 ANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACAC 372
Query: 258 WTSMVSG-------------------------YVNCGQLEKARDLFDRSPVRDIVLWTAM 292
S+ G Y CG +E+A +F + PV++IV W M
Sbjct: 373 SNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTM 432
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I GY Q + +EA+ LF +MQ +LKPD + +L CA L ALE+G+ IHG+I
Sbjct: 433 IGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGY 491
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
D VA AL++MY KCGL+ A ++F + +KD WT +I G M+G +A+ F +
Sbjct: 492 FSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEK 551
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M G +P++ +F +L AC+H GL+ EG + F++M I+PKLEHY C++DLL R+G
Sbjct: 552 MRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSG 611
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
L A + I +P + + I +GALLS CRI+ +V++ EK+A + ++E +++ ++ L
Sbjct: 612 NLSRAYKFIETMPIKPDAAI---WGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVL 668
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
LAN+YA A +WE+V +++++ + G++ GCS IE+ G + F GD SH + K I S+
Sbjct: 669 LANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSL 728
Query: 593 LDRMA 597
L ++
Sbjct: 729 LRKLT 733
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 198/434 (45%), Gaps = 38/434 (8%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N I F + G R ++ L S+ + + + TY V + L ++ G++VH +
Sbjct: 28 NAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHSIISS 85
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G+ D + ++ MY G + +++FD + + + WN+ +S + K + ++V +
Sbjct: 86 NGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGL 145
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG--NALLDMY 234
F +M Q + D T L A + K +H Y+ +L F N+L+ Y
Sbjct: 146 FEKM-QELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYV-LKLGFGSYNAVVNSLIAAY 203
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KCG + AR LFDE+ +++V+ W SM+SG +N
Sbjct: 204 FKCGEVESARILFDELSDRDVVSWNSMISG--------------------------CTMN 237
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
G+ + + F +M + + D LV +L CA +G L G+ +H Y + +
Sbjct: 238 GFSR-----NGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSG 292
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
+ L++MY+KCG + A E+F ++ E SWTSII G +A+ LF +M
Sbjct: 293 GVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQ 352
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
S G +PD V+ AC+ +D+GR N + + + L L+++ + G +
Sbjct: 353 SKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKK-NNMGSNLPVSNALMNMYAKCGSM 411
Query: 475 DEAEELIRKIPNEN 488
+EA + ++P +N
Sbjct: 412 EEANLIFSQLPVKN 425
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 7/218 (3%)
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
A I + + A+ L Q L+ + + ++L CA+L +LE GK +H I+
Sbjct: 28 NAKICKFCEMGDLRNAMKLLSRSQRSELELNTY--CSVLQLCAELKSLEDGKRVHSIISS 85
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
N + +D V+ L+ MY CG + K IF + W ++ A G +++ L
Sbjct: 86 NGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGL 145
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
F +M G + D TF VL + V E +R Y ++ Y +++ L
Sbjct: 146 FEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHG-----YVLKLGFGSYNAVVNSLI 200
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
A E R + +E ++ V + +++S C + G
Sbjct: 201 AAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 194/602 (32%), Positives = 335/602 (55%), Gaps = 10/602 (1%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
TQL ++ + I +GL + KL+ H ++ S + L +N +I+
Sbjct: 30 TQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYL-WNSIIR 88
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A G F ++L L+S+ + + PD +T+P V A L + + + +H V+ G
Sbjct: 89 ALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGS 148
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR-- 179
D Y+ N+++DMY + +K+F+EMP +DVVSWN ISG+ + +A++++ +
Sbjct: 149 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSI 208
Query: 180 ---MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYC 235
M PD T+ S L AC L +LE GK +H Y I E N L++MY
Sbjct: 209 KLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYA 268
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG L ++E+F M K+ + W SM++ Y+ G++ + +F+ RDI+ W +I
Sbjct: 269 KCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIAS 328
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
V + + + M+ + PD ++++L C+ L A QGK IHG I + + D
Sbjct: 329 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD 388
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V LIEMY+KCG + + ++F ++ KD +WT++I M G+ KA+ F +M +
Sbjct: 389 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA 448
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G PD + F+ ++ ACSH GLV+EG +F+ M + Y+I+P++EHY C++DLL R+ LLD
Sbjct: 449 AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLD 508
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+AE+ I +P + + I +GALLSACR+ G+ ++ E+++ + ++ D+ ++ L++N
Sbjct: 509 KAEDFILSMPLKPDSSI---WGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSN 565
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYA+ +W+ V ++R+ +K G++K PGCS +EI ++ F G + +E+ +L
Sbjct: 566 IYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGM 625
Query: 596 MA 597
+A
Sbjct: 626 LA 627
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 198/596 (33%), Positives = 340/596 (57%), Gaps = 42/596 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ + A + Q G + N ++ V+C G + A+ +F + + ++++N L
Sbjct: 162 LVHLQCLHACVIQYGFGSDVALANSMLNVYC---KCGRVEDAQALFELMDARDVISWNSL 218
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ +A+ G+ R+ L L +++ G+ PD T+ + A ++ G+ VHG++++ GL
Sbjct: 219 VSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGL 278
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E D+++ S++ MY G + + ++F+ M KDV+SW ISG V+ + AV VFRR
Sbjct: 279 EQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRR 338
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M + +MP T+ S L+AC L + LG +H YI Q ++
Sbjct: 339 MLKS-RVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKL---------------- 381
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
++P++N S+V+ Y CG LE++ +FDR RDIV W A+++G+ Q
Sbjct: 382 ----------DIPSQN-----SLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQ 426
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+A+ LF EM+ R +PD +V+LL CA +GAL QGKWIH ++ ++ + ++
Sbjct: 427 NGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILI 486
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TAL++MY+KCG + A + F + ++D SW+SII G +GK AL ++S + G
Sbjct: 487 DTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGI 546
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+ + ++ +LSACSH GLVD+G FF++MT+ + I+P+LEH C++DLL RAG ++EA
Sbjct: 547 QPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAY 606
Query: 479 ELIRKI-PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
+++ P + +++ G LL ACR GNV++G+ +A + ++ ++ + LA+ Y
Sbjct: 607 SFYKRMFPKPSMDVL----GILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSY 662
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
AS RW+ V V +MK + ++K+PG S IE++G I F SH + +EI +L
Sbjct: 663 ASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVL 718
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 202/443 (45%), Gaps = 37/443 (8%)
Query: 47 SIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
S +P +YN +I + G+F LL +S + PD T+P + KA L
Sbjct: 7 SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G H V+ G D+Y+ S+++ Y G + +K+FD M D++VV W I + +
Sbjct: 67 GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI- 225
+ A ++ MR+ + P T++ LS L +L+ +H + Q + +
Sbjct: 127 AGEHDVAFSMYNIMRRQ-GIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVA 182
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ N++L++YCKCG + +A+ LF+ M ++VI W S+VSGY G +
Sbjct: 183 LANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIR------------- 229
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
E + L M+ ++PD+ +L++ A L GK +HG
Sbjct: 230 ------------------EVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHG 271
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+I + D+ + T+LI MY KCG + A IF + KD SWT++I GL N +
Sbjct: 272 HILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM 331
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A+ +F +M+ P T VL+AC+ G G + +I+ + L+
Sbjct: 332 AVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILR-QRIKLDIPSQNSLV 390
Query: 466 DLLGRAGLLDEAEELIRKIPNEN 488
+ + G L+++ + ++ +
Sbjct: 391 TMYAKCGHLEQSCSVFDRMSRRD 413
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 28/277 (10%)
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
+ A+IN F + + + M PD +L+ C L G H +
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + D+ +AT+LI Y+K G + A ++F + +++ WT++I G+ + A
Sbjct: 76 VDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFS 135
Query: 409 LFSQMISGGAKPDDITFIGVLSA--------CSHGGLVDEG----RRFFNTMTEVYQIQP 456
+++ M G +P +T +G+LS C H ++ G N+M VY
Sbjct: 136 MYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCG 195
Query: 457 KLEHYGCLIDLL---------------GRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
++E L +L+ + G + E +L+ ++ + E +G+L+S
Sbjct: 196 RVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVS 255
Query: 502 ACRIYGNVDMGEKL-AALLEKIESKDSSFHTLLANIY 537
A + + +G+ + +L +DS T L +Y
Sbjct: 256 AAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMY 292
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/577 (35%), Positives = 328/577 (56%), Gaps = 43/577 (7%)
Query: 23 LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF--RKSLLLFSKLR 80
L++L+ CT + YA ++ IQ+P + ++ L+ F+ + + R S L + ++R
Sbjct: 39 LSRLLRRCTAAT--QFRYARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMR 96
Query: 81 ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKIC 140
GV P T+P + KAV L + + H +++K G + D +V NS++ Y G
Sbjct: 97 RNGVVPSRHTFPPLLKAVFKLRDANPFQ-FHAHILKFGFDSDLFVRNSLISGYSNCGLFE 155
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
++FD DKDVVSW I G V+ +A+ F M++ + +E TVVS L A
Sbjct: 156 FGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRS-GVAANEMTVVSVLKAT 214
Query: 201 TALKNLELGKEIHRYINQ--ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
+++ G+ IH + + + +G++L+DMY KC
Sbjct: 215 RKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKC--------------------- 253
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
G + A+ +FD P R++V WTA+I GYVQ F++ + +F EM +
Sbjct: 254 ----------GCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVA 303
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
P++ L ++L+ CA +GAL +G+ +H Y+ +N I ++ V T LI+ YAKCG +E+A+ +
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILV 363
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
F LREK+ +WT++I G A +G A++LF M+S P+++TFI VLSAC+HGGLV
Sbjct: 364 FERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLV 423
Query: 439 DEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
+EGRR F +M E + ++PK +HY C++DL GR GLL+EA+ LI ++P E + +GA
Sbjct: 424 EEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAV---WGA 480
Query: 499 LLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
L +C I+ + ++G+ A+ + K++ S +TLLAN+Y+ + W+DV VR++MK+ V
Sbjct: 481 LFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQV 540
Query: 559 RKVPGCSSIEINGIIHEFLVGDPSHS-EMKEIYSMLD 594
K PGCS IE+ G +HEF+ D E ++Y LD
Sbjct: 541 VKSPGCSWIEVKGKLHEFIAFDDKKPLESDDLYKTLD 577
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 189/468 (40%), Positives = 288/468 (61%), Gaps = 8/468 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLG---KICNVKKLFDEMPDKDVVSWNVSISGH 164
+++ ++ +G D Y I+ + + + +LF + + WN I
Sbjct: 27 KQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTFIWNTVIRAF 86
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFT 223
+ A+ +F+ M N +P+ T ACT L NL LG H + I EF
Sbjct: 87 AEKNEPRKAIMLFKNMLYS-NFLPNNYTYSFLFKACTDLNNLYLGLACHCQSIKLGWEFY 145
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ N L+ M+ GC+ AR+LFD N++VI WT++++GYV GQ+ R+LFD+ P
Sbjct: 146 DFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRAGQVLIGRELFDKMPE 205
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
R+ V W+AMI GYV+ F+EA+ LF M I P+ +V + CA LGAL+QG+WI
Sbjct: 206 RNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINACASLGALDQGRWI 265
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H YI NR+ +D V+ ALI+MYAKCG IE A IF ELR +D +T +I GLA +G+
Sbjct: 266 HCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVHVYTCLISGLANHGQS 325
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
A+ELF +M S G P+++TF+ VL+ACS GLVD+G R F M+++Y +P+++HYGC
Sbjct: 326 ATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQHYGC 385
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
L+DLLGRAG L+EA++L++++P + + ++ GALL+A R+YG+V++GE+ L ++
Sbjct: 386 LVDLLGRAGKLEEAKKLVKEMPMKPDSYVL---GALLNASRVYGDVELGEETVESLAQLS 442
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
S H +L+N+YASAN+W++V VR+ M + VRKVPGCS I+++G
Sbjct: 443 LDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSLIKVDG 490
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 213/423 (50%), Gaps = 45/423 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHG-NLLYAEKIFGSIQSPCLLAYNLL 59
++Q+KQIQ + G ++P K++ FC S+ +L +A ++F ++ +N +
Sbjct: 23 ISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTFIWNTV 82
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+AFA+K RK+++LF + P+N+TY F+FKA L + G H +K G
Sbjct: 83 IRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLYLGLACHCQSIKLGW 142
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKK-------------------------------LFDE 148
EF +V N ++ M+ + G + + +K LFD+
Sbjct: 143 EFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRAGQVLIGRELFDK 202
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP+++ VSW+ I+G+V+ FE+A+++F M P+ +V ++AC +L L+
Sbjct: 203 MPERNSVSWSAMITGYVRVGFFEEALELFNAMLIS-GFWPNHAGIVCAINACASLGALDQ 261
Query: 209 GKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+ IH YI + ++ +MG AL+DMY KCGC+ A +F E+ N++V +T ++SG N
Sbjct: 262 GRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVHVYTCLISGLAN 321
Query: 268 CGQLEKARDLFDR----SPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKPDKF 322
GQ A +LF+R V + V + +++N + D+ + +F M +I +P
Sbjct: 322 HGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQ 381
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI---EMYAKCGLIEKALEIF 379
L+ + G LE+ K + + E + D+ V AL+ +Y L E+ +E
Sbjct: 382 HYGCLVDLLGRAGKLEEAKKL---VKEMPMKPDSYVLGALLNASRVYGDVELGEETVESL 438
Query: 380 YEL 382
+L
Sbjct: 439 AQL 441
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 201/527 (38%), Positives = 319/527 (60%), Gaps = 15/527 (2%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N +IK+ + R++LLLF + E GVS D F+ V KA LG VK+G ++HG++
Sbjct: 93 WNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGFLK 152
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
KTGL D ++ N ++ +Y G + +++FD MP +D VS+N I G+VKC E A +
Sbjct: 153 KTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARE 212
Query: 176 VFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG-NALLDM 233
+F +LMP+E ++S S + G +I + E+ ++ N+++D
Sbjct: 213 LF-------DLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDG 265
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y K G + +A+ LFD MP ++V+ W++M+ GY G + +A+ LFD+ P RD+V + +MI
Sbjct: 266 YVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMI 325
Query: 294 NGYVQFNRFD-EAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
GYVQ NR++ EA+ +F +M+ L PD+ LV +L+ AQLG L + +H YI E +
Sbjct: 326 AGYVQ-NRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQ 384
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G A ++
Sbjct: 385 FFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLL 444
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
Q+ KPDDITF+G+L+ACSH GLV EG F M ++I+P+L+HYGC++D+L R+
Sbjct: 445 QIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRS 504
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G ++ A+ LI ++P E N++I + L+AC + + GE +A L + S +
Sbjct: 505 GSIELAKNLIEEMPIEPNDVI---WRTFLAACNHHKEFETGELVAKHLIWEAGYNPSSYV 561
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
LL+N+YAS +W+DV +R MKE + KVPGCS IE++G +HEF V
Sbjct: 562 LLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWIELDGRVHEFFV 608
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 141/332 (42%), Gaps = 58/332 (17%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER------------- 82
G L +A +IF + ++YN +I + K GS + LF + E
Sbjct: 174 GWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISG 233
Query: 83 --------GVSPDNFTYPFVFKAVGWL----GEVKKGE-KVHGYVVKTGLEFDTYVCNSI 129
++ F+ + W G VK G + Y+ D +++
Sbjct: 234 YAQTSDGVDIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTM 293
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+D Y LG + K LFD+MP +DVVS+N I+G+V+ +A+++F M + +L PD
Sbjct: 294 IDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPD 353
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFT-PIMGNALLDMYCKCGCLSEARELFD 248
E T+V LSA L L ++H YI ++ F +G AL+DMY KCG + A +F
Sbjct: 354 ETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFK 413
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+ NK++ W +M+ G G E A D+ + R I
Sbjct: 414 GIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSI---------------------- 451
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
KPD V LL C+ G +++G
Sbjct: 452 ---------KPDDITFVGLLNACSHSGLVKEG 474
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 35/234 (14%)
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
D LW A+I + A+ LF M + DKF L +L C++LG +++G IH
Sbjct: 89 DXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIH 148
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
G++ + + D + LI +Y KCG + A +IF + ++D+ S+ S+I G G
Sbjct: 149 GFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTE 208
Query: 405 KALELF-------------SQMISGGAKPDD-----------------ITFIGVLSACSH 434
A ELF + MISG A+ D I++ ++
Sbjct: 209 SARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDGYVK 268
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
G +++ + F+ M + + + +ID + G + +A+ L ++P+ +
Sbjct: 269 HGRIEDAKYLFDVMP-----RRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRD 317
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 14/155 (9%)
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR----------EKDAASWTSII 394
G+I +T V+A A + +E A +F+E +D W ++I
Sbjct: 41 GFIKNPNLTTRIVLAFAASR---RPYXVEFARFVFHEYXIRSFSPGGGDXEDXYLWNAVI 97
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
+ +AL LF M+ G D + VL ACS GLV EG + + + +
Sbjct: 98 KSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGFLKKT-GL 156
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
L CLI L + G L A ++ ++P ++
Sbjct: 157 WSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDS 191
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 193/490 (39%), Positives = 290/490 (59%), Gaps = 11/490 (2%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H + + GL+ + + Y LG++ LF + V W I GH
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 169 RFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIM 226
E A++ + +M QG P+ T S L C +E GK +H + + + +
Sbjct: 108 LHEQALNFYAQMLTQGVE--PNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYV 161
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
LLD+Y + G + A++LFD MP K+++ T+M++ Y G+L+ AR LFD RD
Sbjct: 162 RTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG 221
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V W MI+GY Q +EA+ LFR M + KP++ ++++L+ C QLGALE G+W+H Y
Sbjct: 222 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 281
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I N I + V TAL++MY+KCG +E A +F ++ +KD +W S+I G AM+G +A
Sbjct: 282 IENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEA 341
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L+LF M G P +ITFIG+LSAC H G V EG FN M + Y I+PK+EHYGC+++
Sbjct: 342 LQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVN 401
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LLGRAG +++A EL++ + E + + L+G LL ACR++G + +GEK+ LL +
Sbjct: 402 LLGRAGHVEQAYELVKNMNIEPDPV---LWGTLLGACRLHGKIALGEKIVELLVDQNLAN 458
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
S + LL+NIYA+ W+ V +R MK+ GV+K PGCSSIE+N +HEFL G +H +
Sbjct: 459 SGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKR 518
Query: 587 KEIYSMLDRM 596
KEIY ML+ +
Sbjct: 519 KEIYMMLEEI 528
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 209/437 (47%), Gaps = 72/437 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
++ L QI A +F+ GL +P KL ++ S G L Y+ +FG Q+P + + +I
Sbjct: 43 ISHLLQIHAVLFRHGLDHHPILNFKLQR--SYASLGRLDYSVALFGRTQNPSVFFWTAII 100
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A +G ++L ++++ +GV P+ FT+ + K L ++ G+ +H VK G +
Sbjct: 101 HGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK----LCPIEPGKALHSQAVKLGFD 156
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS------------------------ 156
D YV ++D+Y G + + ++LFD MP+K +VS
Sbjct: 157 SDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGM 216
Query: 157 -------WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
WNV I G+ + +A+ +FRRM + P+E TV+S LSAC L LE G
Sbjct: 217 EERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK-AKAKPNEVTVLSVLSACGQLGALESG 275
Query: 210 KEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ +H YI N ++F +G AL+DMY KCG L +AR +FD++ +K+V+ W SM+ GY
Sbjct: 276 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYA-- 333
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
++G+ Q EA+ LF+ M + L P + +L
Sbjct: 334 ------------------------MHGFSQ-----EALQLFKSMCRMGLHPTNITFIGIL 364
Query: 329 TGCAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKD 386
+ C G + +G I + +E I ++ + + G +E+A E+ + E D
Sbjct: 365 SACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPD 424
Query: 387 AASWTSIICGLAMNGKI 403
W +++ ++GKI
Sbjct: 425 PVLWGTLLGACRLHGKI 441
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 209/570 (36%), Positives = 324/570 (56%), Gaps = 43/570 (7%)
Query: 30 CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRE-RGVSPDN 88
C PS + +F ++ L +N ++ A+ + F ++ +FS+L PDN
Sbjct: 154 CGSPSDSRM-----VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDN 208
Query: 89 FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICN-VKKLFD 147
FT P V KA L ++ G+ +HG K L D +V N+++ MYG G + VK++FD
Sbjct: 209 FTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFD 268
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
M K V SWN + G+ + A+D++ +M L PD T+ S L AC+ +K+L
Sbjct: 269 LMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDS-GLDPDWFTIGSLLLACSRMKSLH 327
Query: 208 LGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
G+EIH + + L P +G +LL +Y IC
Sbjct: 328 YGEEIHGFALRNGLAVDPFIGISLLSLY---------------------IC--------- 357
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
CG+ A+ LFD R +V W MI GY Q DEA+ LFR+M ++P + ++
Sbjct: 358 -CGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 416
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
+ C+QL AL GK +H + + +T D V++++I+MYAK G I + IF LREKD
Sbjct: 417 VCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKD 476
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
ASW II G ++G+ +ALELF +M+ G KPDD TF G+L ACSH GLV++G +FN
Sbjct: 477 VASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFN 536
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
M ++ I+PKLEHY C++D+LGRAG +D+A LI ++P + + I + +LLS+CRI+
Sbjct: 537 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRI---WSSLLSSCRIH 593
Query: 507 GNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
GN+ +GEK+A L ++E + + L++N++A + +W+DV VR +MK++G++K GCS
Sbjct: 594 GNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSW 653
Query: 567 IEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
IE+ G +H FL+GD E++E+ R+
Sbjct: 654 IEVGGKVHNFLIGDEMLPELEEVRETWRRL 683
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 202/431 (46%), Gaps = 40/431 (9%)
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS-IMDMYGVLGKICNVKKLFDEMPDK 152
+ +A G +++ G ++H V + + +V N+ I+ MY + G + + +FD++ K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
++ WN +S + + FEDA+ +F + PD T+ + AC L +L LG+ I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 213 HRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H + +L +GNAL+ MY KCG + EA
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEA---------------------------- 262
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+ +FD + + W A++ GY Q + +A+ L+ +M L PD F + +LL C
Sbjct: 263 --VKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
+++ +L G+ IHG+ N + VD + +L+ +Y CG A +F + + SW
Sbjct: 321 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWN 380
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+I G + NG ++A+ LF QM+S G +P +I + V ACS + G+ +
Sbjct: 381 VMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKA 440
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
+ + + +ID+ + G + ++ + ++ ++ V + +++ I+G
Sbjct: 441 H-LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKD----VASWNVIIAGYGIHGR--- 492
Query: 512 GEKLAALLEKI 522
G++ L EK+
Sbjct: 493 GKEALELFEKM 503
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 208/646 (32%), Positives = 355/646 (54%), Gaps = 57/646 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL---LAYN 57
+ Q +Q+ +Q+ + P +L+ + L +A K+F +I L L +N
Sbjct: 44 LQQARQLHSQLVLTTAHRLPFLAARLI--AVYARFAFLSHARKVFDAIPLESLHHLLLWN 101
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+I+A G + +L L+ ++R+ G PD FT P V +A LG VH + ++
Sbjct: 102 SIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQM 161
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG-------------- 163
G +V N ++ MYG LG++ + ++LFD M + +VSWN +SG
Sbjct: 162 GFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVF 221
Query: 164 ---------------------HVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACT 201
H +C +++ +++F+ MR +G + + VV LS C
Sbjct: 222 KRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVV--LSVCA 279
Query: 202 ALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
+ ++ GKEIH Y+ + E + NAL+ Y K + +A ++F E+ NKN++ W +
Sbjct: 280 DMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNA 339
Query: 261 MVSGYVNCGQLEKARDLF---------DRSPVR-DIVLWTAMINGYVQFNRFDEAVALFR 310
++S Y G ++A F D S VR +++ W+A+I+G+ R ++++ LFR
Sbjct: 340 LISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFR 399
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+MQ+ ++ + + ++L+ CA+L AL G+ +HGY N ++ + +V LI MY KCG
Sbjct: 400 QMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCG 459
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
++ +F + +D SW S+I G M+G AL F++MI KPD+ITF+ +LS
Sbjct: 460 DFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILS 519
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
ACSH GLV GR F+ M ++I+P +EHY C++DLLGRAGLL EA +++R +P E NE
Sbjct: 520 ACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNE 579
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+ +GALL++CR+Y ++D+ E+ A+ + ++SK + LL+NIYA+ RW+D VR
Sbjct: 580 YV---WGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDSARVR 636
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+ G++K+PG S IE+ ++ F G+ H +++IY +L+ +
Sbjct: 637 VSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILEEL 682
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 199/599 (33%), Positives = 342/599 (57%), Gaps = 45/599 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ + A + Q G + N ++ V+C G + A+ +F + + ++++N L
Sbjct: 162 LVHLQCLHACVIQYGFGSDVALANSMLNVYC---KCGRVEDAQALFELMDARDVISWNSL 218
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ +A+ G+ R+ L L +++ G+ PD T+ + A ++ G+ VHG++++ GL
Sbjct: 219 VSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGL 278
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E D+++ S++ MY G + + ++F+ M KDV+SW ISG V+ + AV VFRR
Sbjct: 279 EQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRR 338
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M + +MP T+ S L+AC L + LG +H YI Q ++
Sbjct: 339 MLKS-RVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKL---------------- 381
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
++P++N S+V+ Y CG LE++ +FDR RDIV W A+++G+ Q
Sbjct: 382 ----------DIPSQN-----SLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQ 426
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+A+ LF EM+ R +PD +V+LL CA +GAL QGKWIH ++ ++ + ++
Sbjct: 427 NGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILI 486
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TAL++MY+KCG + A + F + ++D SW+SII G +GK AL ++S + G
Sbjct: 487 DTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGI 546
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+ + ++ +LSACSH GLVD+G FF++MT+ + I+P+LEH C++DLL RAG ++EA
Sbjct: 547 QPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAY 606
Query: 479 ELIRKI-PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
+++ P + +++ G LL ACR GNV++G+ +A + ++ ++ + LA+ Y
Sbjct: 607 SFYKRMFPKPSMDVL----GILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSY 662
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
AS RW+ V V +MK + ++K+PG S IE++G I F SH + +EI +DR+
Sbjct: 663 ASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEI---IDRV 718
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 198/432 (45%), Gaps = 37/432 (8%)
Query: 47 SIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
S +P +YN +I + G+F LL +S + PD T+P + KA L
Sbjct: 7 SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G H V+ G D+Y+ S+++ Y G + +K+FD M D++VV W I + +
Sbjct: 67 GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI- 225
+ A ++ MR+ + P T++ LS L +L+ +H + Q + +
Sbjct: 127 AGEHDVAFSMYNIMRRQ-GIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVA 182
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ N++L++YCKCG + +A+ LF+ M ++VI W S+VSGY G +
Sbjct: 183 LANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIR------------- 229
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
E + L M+ ++PD+ +L++ A L GK +HG
Sbjct: 230 ------------------EVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHG 271
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+I + D+ + T+LI MY KCG + A IF + KD SWT++I GL N +
Sbjct: 272 HILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM 331
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A+ +F +M+ P T VL+AC+ G G + +I+ + L+
Sbjct: 332 AVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILR-QRIKLDIPSQNSLV 390
Query: 466 DLLGRAGLLDEA 477
+ + G L+++
Sbjct: 391 TMYAKCGHLEQS 402
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 28/277 (10%)
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
+ A+IN F + + + M PD +L+ C L G H +
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + D+ +AT+LI Y+K G + A ++F + +++ WT++I G+ + A
Sbjct: 76 VDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFS 135
Query: 409 LFSQMISGGAKPDDITFIGVLSA--------CSHGGLVDEG----RRFFNTMTEVYQIQP 456
+++ M G +P +T +G+LS C H ++ G N+M VY
Sbjct: 136 MYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCG 195
Query: 457 KLEHYGCLIDLL---------------GRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
++E L +L+ + G + E +L+ ++ + E +G+L+S
Sbjct: 196 RVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVS 255
Query: 502 ACRIYGNVDMGEKL-AALLEKIESKDSSFHTLLANIY 537
A + + +G+ + +L +DS T L +Y
Sbjct: 256 AAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMY 292
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 208/599 (34%), Positives = 340/599 (56%), Gaps = 10/599 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQ+ A+I L + +KL+ F + +H L A K+F I + ++N ++
Sbjct: 50 LRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNH--LYEAHKVFDKILDKNIFSWNAML 107
Query: 61 KAFAKKGSFRKSLLLFSKLRERGV---SPDNFTYPFVFKAVGWL-GEVKKGEKVHGYVVK 116
++ +L L S L PDNFT V KA+ L + ++V +V++
Sbjct: 108 IGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLR 167
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G + D +V N+++ Y + + LFD M D+D+VSWN I+G+ + +ED ++
Sbjct: 168 HGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKEL 227
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
+R+M L P+ TVVS L AC +L G ++H++I +++E N+L+ +Y
Sbjct: 228 YRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYA 287
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG L ARELF+EM NK+ + + S+VSGY+ G ++KA DLF + W A+I+G
Sbjct: 288 KCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISG 347
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
VQ N + + L +EMQ +P+ L ++L + L+ GK IH Y N +
Sbjct: 348 LVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHN 407
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
VAT++I+ YAK G + A +F + +++ WT+II + +G N AL LF M+S
Sbjct: 408 IYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLS 467
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G +PD +TF VL+AC+H G+V+E + F+ M Y QP +EHY C++ +L RAG+L
Sbjct: 468 NGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLS 527
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA E I K+P E N ++GALL+ + G+V++G+ + L +E +++ + ++AN
Sbjct: 528 EAAEFICKMPIEPN---AKVWGALLNGVSVSGDVELGKFVCDHLFNMEPENTGNYVIMAN 584
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+Y+ A RWE+ N+R+KMK++G++K+PG S IE +G + F+ D S +EIY ML+
Sbjct: 585 LYSQAGRWEEAENIREKMKKIGLKKIPGTSWIETSGGLRSFIARDVSSERSEEIYGMLE 643
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
L+ C+ L Q K +H I + +T D +A+ LI Y+K + +A ++F ++ +K+
Sbjct: 40 LIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKN 99
Query: 387 AASWTSIICGLA---MNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
SW +++ G + M+ L S KPD+ T VL A S
Sbjct: 100 IFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALS 149
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 311/521 (59%), Gaps = 16/521 (3%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+ HG V+ L +YV I+ + G+ + ++F ++P ++ N I + +
Sbjct: 28 RAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAARVFAQIPAPNLHLHNAMIKAYAQNH 87
Query: 169 RFEDAVDVFRRMRQGCNLMP--------DEGTVVSTLSACTALKNLELGKEIHRYINQE- 219
DAV+V+ RM + C P D T L AC AL LG+++H ++ +
Sbjct: 88 LHRDAVEVYVRMLR-CLPHPSTAGFSVGDRFTYPFLLKACGALAASRLGRQVHAHVARSG 146
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
E ++ N+L++MY +CG LS AR+ FD M K+V+ W +++S + GQ+ +AR+LF
Sbjct: 147 CESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHARMGQMRRARELFY 206
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P + +V WTA+++GY F AV +FR MQ+ +PD +VA+L CAQLGALE
Sbjct: 207 SMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLPACAQLGALEL 266
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G+WI+ Y +++ + + AL+EMYAKCG IE+AL++F+ + EKD SW++ I GLA
Sbjct: 267 GRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAA 326
Query: 400 NGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+G+ +A+ LF M G P+ ITF+G+LSACSH GLVDEG R+ + M E Y ++P +
Sbjct: 327 HGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYLDQMKEDYGVEPGV 386
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
EHYGC++DLLGR+G + A + IR +P + I +G+LLSACR +G+V+ A
Sbjct: 387 EHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKI---WGSLLSACRSHGDVETAVVAAER 443
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
L ++E D +LAN+Y +A RW +V + R++++ RK PGCS IE++ ++ EF+
Sbjct: 444 LVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTPGCSMIEVDNVVREFVA 503
Query: 579 GDPSHSEMKEIYSMLDRMAKTLLDSKQ--NAMEGDNLVAIN 617
G E+ I ++LD +A L D ++ ++ GD +V ++
Sbjct: 504 GQDLGPELGGIATVLDILASKLADDEELVDSDCGDAIVFVS 544
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 194/422 (45%), Gaps = 75/422 (17%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSP--------DNFTYPFVF 95
+F I +P L +N +IKA+A+ R ++ ++ ++ P D FTYPF+
Sbjct: 64 VFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLL 123
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA G L + G +VH +V ++G E V NS+++MY G + +K FD M +KDVV
Sbjct: 124 KACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVV 183
Query: 156 SWNVSISGHVKC--MR-----------------------------FEDAVDVFRRMRQGC 184
SWN IS H + MR F AV+VFR M Q
Sbjct: 184 SWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLM-QME 242
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEA 243
PD+ ++V+ L AC L LELG+ I+ Y ++ + + NAL++MY KCGC+ EA
Sbjct: 243 GFEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEA 302
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+LF M K+VI W++ + G G+ +A LF+
Sbjct: 303 LQLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFE------------------------ 338
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATAL 362
+ RE +++ P+ V LL+ C+ G +++G +++ + + +
Sbjct: 339 ---VMDREGRVM---PNGITFVGLLSACSHAGLVDEGLRYLDQMKEDYGVEPGVEHYGCV 392
Query: 363 IEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
+++ + G I++AL+ + D W S++ +G + A+ +++ +P
Sbjct: 393 VDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGDVETAVVAAERLVE--LEPG 450
Query: 422 DI 423
D+
Sbjct: 451 DV 452
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 14/293 (4%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
H G + A ++F S+ ++++ L+ + G F ++ +F ++ G PD+ +
Sbjct: 191 AHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVS 250
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
V A LG ++ G ++ Y K G+ Y+CN++M+MY G I +LF M
Sbjct: 251 IVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMS 310
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+KDV+SW+ +I G R +AV +F M + +MP+ T V LSAC+ + L
Sbjct: 311 EKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACS---HAGLVD 367
Query: 211 EIHRYINQELEFTPIMGNA-----LLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
E RY++Q E + ++D+ + G + A + MP + W S++S
Sbjct: 368 EGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSA 427
Query: 265 YVNCGQLEK----ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+ G +E A L + P D+ + N Y R+ E + +E++
Sbjct: 428 CRSHGDVETAVVAAERLVELEP-GDVGNLVMLANVYGAAGRWGEVASTRKEIR 479
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 306/506 (60%), Gaps = 15/506 (2%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ E+KK H V+K L ++ ++D+ + LF E+ D + +N
Sbjct: 1 MAELKKN---HALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAM 57
Query: 161 ISGHVKCMRFEDAVDVFRRM-RQGCN-------LMPDEGTVVSTLSACTALKNLELGKEI 212
I + +D +++M R+ N ++PDE T + AC L LGK++
Sbjct: 58 IRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQV 117
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H ++ + I NAL+DMY KC L +A LFDEM + I W ++SG+V GQ+
Sbjct: 118 HAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQM 177
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+AR LFD P R IV WTA+I+GY + + +A+ +FREMQI ++PD+ ++++L C
Sbjct: 178 RRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPAC 237
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
A+LGALE GKWIH + N + + ALIEMY KCG I++A ++F ++R +D SW+
Sbjct: 238 AKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWS 297
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
++I GLA +GK+ +A+ +F +M KP+ ITF+G+LSAC+H G +EG +F+TM +
Sbjct: 298 TMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKD 357
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
+ I+P++EHYG L+DLLGRAG L +A +++ K+P + + I +G+LLS+CR + N+++
Sbjct: 358 FHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKI---WGSLLSSCRTHCNIEV 414
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
LE++E D+ + LL+NIYA +W+DV+ +R+ ++ ++K PGCS IE+N
Sbjct: 415 AVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNN 474
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ EF+ GD S KEI+ +L+ +A
Sbjct: 475 VAQEFVSGDDSKPYSKEIFWLLELLA 500
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 215/466 (46%), Gaps = 81/466 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LK+ A + + L Q+ + K++ C + ++ YA +F + P YN +I
Sbjct: 1 MAELKKNHALVIKYALSQSNFLVTKMIDVCDR--NEDMDYASFLFKEVIDPNAYLYNAMI 58
Query: 61 KAFAKKGSFRKSLLLF---------SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVH 111
+A + ++ + S+ E + PD FT+PFV KA LG G++VH
Sbjct: 59 RACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVH 118
Query: 112 GYVVKTGLEFDTYVCNSIMDMY-------------------------GV------LGKIC 140
K G + N+++DMY G+ LG++
Sbjct: 119 AQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMR 178
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
+ LFDEMP++ +VSW ISG+ + + DA+DVFR M Q + PDE +++S L AC
Sbjct: 179 RARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREM-QIAGIEPDEASIISVLPAC 237
Query: 201 TALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
L LE GK IH + N L T I NAL++MY KCGC+ +A +LFD+M ++VI W
Sbjct: 238 AKLGALETGKWIHMFCARNGLLRRTCIC-NALIEMYTKCGCIDQACQLFDQMRGRDVISW 296
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
++M+ G N G++ EA+A+F M+ +K
Sbjct: 297 STMIGGLANHGKVR-------------------------------EAIAIFERMKQTNIK 325
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALE 377
P+ V LL+ CA G E+G + ++ I + +L+++ + G + +AL+
Sbjct: 326 PNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALD 385
Query: 378 IFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I ++ K D+ W S++ + I A+ + +PDD
Sbjct: 386 IVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEE--LEPDD 429
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 216/634 (34%), Positives = 338/634 (53%), Gaps = 77/634 (12%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPS--HGNLLYAEKIFGSIQSP-CLLAYNL 58
+Q KQ+ AQI + L +P L+ ++ ++ + H +LL IF S+ SP LA+
Sbjct: 22 SQAKQLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDSLL----IFNSLPSPPTTLAWKS 76
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+I+ + G F SL F ++ G PD+ +P V K+ + +++ GE VHG +++ G
Sbjct: 77 IIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLG 136
Query: 119 LEFDTYVCNSIMDMYG---VLGKICNVKKLFDE--------------------------M 149
+ FD Y CN++M+MY L ++ KK+FDE M
Sbjct: 137 MGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMM 196
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P +D+VSWN ISG+ + EDA+ + R M +L PD T+ S L NL G
Sbjct: 197 PKRDIVSWNTVISGNAQNGMHEDALMMVREMGNA-DLRPDSFTLSSVLPIFAEYVNLLKG 255
Query: 210 KEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
KEIH Y I + +G++L+DMY K C
Sbjct: 256 KEIHGYAIRNGYDADVFIGSSLIDMYAK-------------------------------C 284
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
+++ + +F P D + W ++I G VQ FDE + F++M I ++KP+ +++
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
CA L L GK +HGYI +R + +A+AL++MYAKCG I A IF ++ D
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMV 404
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
SWT++I G A++G A+ LF +M G KP+ + F+ VL+ACSH GLVDE ++FN+M
Sbjct: 405 SWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM 464
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
T+ Y+I P LEHY + DLLGR G L+EA E I + + E ++ LL+ACR++ N
Sbjct: 465 TQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM---HIEPTGSVWSTLLAACRVHKN 521
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+++ EK++ L ++ ++ + LL+NIY++A RW+D +R M++ G++K P CS IE
Sbjct: 522 IELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIE 581
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
I +H F+ GD SH Y ++ K LL+
Sbjct: 582 IKNKVHAFVAGDKSH----PYYDRINEALKVLLE 611
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 322/555 (58%), Gaps = 36/555 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F +I+ ++++ ++ + + F +SL LFS++R G P+NFT+ V KA
Sbjct: 199 ARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVG 258
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L G+ VHG KT + +V ++D+Y G + + ++F+EMP DV+ W+
Sbjct: 259 LEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFM 318
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
I+ + + + E+A+++F RMR+G ++P++ T+ S L AC +L +L+LG +IH ++ +
Sbjct: 319 IARYAQSEQSEEAIEMFCRMRRGL-VLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVG 377
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L+ + NAL+DMY KC G++E + LF
Sbjct: 378 LDMNVFVSNALMDMYAKC-------------------------------GRMENSLQLFS 406
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
SP V W +I GYVQ ++A+ LF++M +++ + ++L CA + ALE
Sbjct: 407 ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEP 466
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G IH + + VV ALI+MYAKCG I+ A +F LRE D SW ++I G ++
Sbjct: 467 GSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSV 526
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G +AL+ F M+ KPD +TF+G+LSACS+ GL+D G+ +F +M E Y I+P E
Sbjct: 527 HGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAE 586
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY C++ LLGR+G LD+A +L+ +IP E + V ++ ALLSAC I+ +V++G A +
Sbjct: 587 HYTCMVWLLGRSGHLDKAAKLVHEIPFEPS---VMVWRALLSACVIHNDVELGRISAQRV 643
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+IE +D + H LL+NIYA+A RW +V ++R MK G+RK PG S IE G +H F VG
Sbjct: 644 LEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVG 703
Query: 580 DPSHSEMKEIYSMLD 594
D SH + K I ML+
Sbjct: 704 DTSHPDTKLINGMLE 718
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 240/488 (49%), Gaps = 44/488 (9%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + +++ LI+ +++ F +++ LFS+L+ G + F + V K +
Sbjct: 98 AAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVS 157
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
K G VH V K G + D +V +++D Y V G +++FD + KD+VSW
Sbjct: 158 AEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGM 217
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH--RYINQ 218
++ +V+ FE+++ +F RMR P+ T S L AC L+ +GK +H +
Sbjct: 218 VACYVENECFEESLKLFSRMRI-VGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTS 276
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
LE +G L+D+Y K G + +A ++F+EMP +VI W+ M++ Y Q E+A ++F
Sbjct: 277 YLE-ELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMF 335
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
R R +VL P++F L +LL CA L L+
Sbjct: 336 CRMR-RGLVL------------------------------PNQFTLASLLQACASLVDLQ 364
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G IH ++ + + ++ V+ AL++MYAKCG +E +L++F E SW ++I G
Sbjct: 365 LGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYV 424
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
G KAL LF M+ + ++T+ VL AC+ ++ G + + V I K
Sbjct: 425 QAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHS--LSVKTIYDKN 482
Query: 459 EHYG-CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
G LID+ + G + +A L+ + E++++ + A++S ++G GE L
Sbjct: 483 TVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQVS---WNAMISGYSVHGL--YGEALKT 536
Query: 518 LLEKIESK 525
+E++
Sbjct: 537 FESMLETE 544
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 185/371 (49%), Gaps = 35/371 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A ++F + ++ ++ +I +A+ +++ +F ++R V P+ FT +
Sbjct: 295 GDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLL 354
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+A L +++ G ++H +VVK GL+ + +V N++MDMY G++ N +LF E P+ V
Sbjct: 355 QACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDV 414
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G+V+ E A+ +F+ M + C + E T S L AC + LE G +IH
Sbjct: 415 SWNTVIVGYVQAGNGEKALILFKDMLE-CQVQGTEVTYSSVLRACAGIAALEPGSQIHSL 473
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + ++GNAL+DMY KCG + +AR +FD + + + W +M+SGY
Sbjct: 474 SVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGY--------- 524
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
++G + EA+ F M KPDK V +L+ C+
Sbjct: 525 -----------------SVHGL-----YGEALKTFESMLETECKPDKVTFVGILSACSNA 562
Query: 335 GALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTS 392
G L++G+ + + E I A T ++ + + G ++KA ++ +E+ E W +
Sbjct: 563 GLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRA 622
Query: 393 IICGLAMNGKI 403
++ ++ +
Sbjct: 623 LLSACVIHNDV 633
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/560 (24%), Positives = 243/560 (43%), Gaps = 80/560 (14%)
Query: 76 FSKLRERGVSPDNFTYPF--VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
F R SP+ TY + + ++ G+ G+ +H ++K G D + N +++ Y
Sbjct: 30 FLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFY 89
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGT 192
+ + KLFDEMPD++ VS+ I G+ +C+RF +A+ +F R++ +G L P
Sbjct: 90 VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNP---F 146
Query: 193 VVST-LSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
V ST L + + +LG +H + + + +G AL+D Y CG
Sbjct: 147 VFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCG------------ 194
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
Y C AR +FD +D+V WT M+ YV+ F+E++ LF
Sbjct: 195 --------------YAEC-----ARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFS 235
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
M+I+ KP+ F ++L C L GK +HG + + V LI++Y K G
Sbjct: 236 RMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSG 295
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
++ AL++F E+ + D W+ +I A + + +A+E+F +M G P+ T +L
Sbjct: 296 DVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQ 355
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN---- 486
AC+ + G + + +V + + L+D+ + G ++ + +L + PN
Sbjct: 356 ACASLVDLQLGNQIHCHVVKV-GLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDV 414
Query: 487 ENNEIIVPL---------------------------YGALLSACRIYGNVDMGEKLAAL- 518
N +IV Y ++L AC ++ G ++ +L
Sbjct: 415 SWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLS 474
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
++ I K++ L ++YA +D V ++E + N +I + V
Sbjct: 475 VKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREH--------DQVSWNAMISGYSV 526
Query: 579 GDPSHSEMKEIYSMLDRMAK 598
+K SML+ K
Sbjct: 527 HGLYGEALKTFESMLETECK 546
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 199/576 (34%), Positives = 320/576 (55%), Gaps = 12/576 (2%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFT 90
+ + G+L A +F I P L + +LI A K G +++ ++ R + V PD
Sbjct: 21 YSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLL 80
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
V KA L +V ++VH ++ G D + N+++DMYG + +F+ MP
Sbjct: 81 LLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMP 140
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN-LMPDEGTVVSTLSACTALKNLELG 209
+DV+SW S +V C +A+ FR+M G N P+ TV S L ACT LK+L+ G
Sbjct: 141 FRDVISWTSMASCYVNCGLLREALGAFRKM--GLNGERPNSVTVSSILPACTDLKDLKSG 198
Query: 210 KEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+E+H ++ + + + +AL++MY C + +A+ +FD M ++ + W +++ Y
Sbjct: 199 REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLN 258
Query: 269 GQLEKARDLFDRSPVRDIVL----WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
+ EK +F R + L W A+I G +Q R ++A+ + MQ KP++ +
Sbjct: 259 KECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITI 318
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
++L C L +L GK IHGYI + D TAL+ MYAKCG +E + +F + +
Sbjct: 319 TSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTK 378
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
+D SW ++I +M+G +AL LF +M+ G +P+ +TF GVLS CSH LVDEG
Sbjct: 379 RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLI 438
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
F++M+ + ++P +H+ C++D+L RAG L+EA E I+K+P E +GALL CR
Sbjct: 439 FDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPT---AGAWGALLGGCR 495
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGC 564
+Y NV++G A L +IES + + LL+NI SA W + + R+ M++ GV K PGC
Sbjct: 496 VYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGC 555
Query: 565 SSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
S I++ +H F+VGD S+ + EIY LD M + +
Sbjct: 556 SWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKM 591
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 208/498 (41%), Gaps = 109/498 (21%)
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
+ +Y G + + LFD++P D+ +W + IS K R +A+ + R + P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 189 DEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
D+ ++S AC +L+++ K +H I ++GNAL+DMY KC C AR +F
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
+ MP ++VI WTSM S YVNCG L EA+
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLR-------------------------------EALG 165
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
FR+M + +P+ + ++L C L L+ G+ +HG++ N + + V++AL+ MYA
Sbjct: 166 AFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYA 225
Query: 368 KCGLIEKALEIFYELREKDA-----------------------------------ASWTS 392
C I +A +F + +D ASW +
Sbjct: 226 SCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNA 285
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS-----------HG------ 435
+I G NG+ KALE+ S+M + G KP+ IT VL AC+ HG
Sbjct: 286 VIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHW 345
Query: 436 ------------------GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
G ++ RR F+ MT+ + + +I G +EA
Sbjct: 346 FFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVS-----WNTMIIATSMHGNGEEA 400
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES--KDSSFHTLLAN 535
L R++ + + +LS C VD G + + + S D+ H+ + +
Sbjct: 401 LLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVD 460
Query: 536 IYASANRWEDVTNVRQKM 553
+ + A R E+ +KM
Sbjct: 461 VLSRAGRLEEAYEFIKKM 478
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 311/557 (55%), Gaps = 36/557 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + L+++N +I F++ G +K+L L ++++ G PD+ T V A
Sbjct: 201 AYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAAD 260
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+G + G+ +HGY ++ G + ++ DMY G + + +FD M K VVSWN
Sbjct: 261 VGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSM 320
Query: 161 ISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
+ G+V+ E A+ VF +M +G + P T++ L AC L +LE GK +H++++Q
Sbjct: 321 MDGYVQNGEPEKAIAVFEKMLEEGID--PTGVTIMEALHACADLGDLERGKFVHKFVDQ- 377
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L++ ++ S++S Y C +++ A D+F+
Sbjct: 378 -----------LNL------------------GSDISVMNSLISMYSKCKRVDIASDIFN 408
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
R V W AMI GY Q R EA+ F EM+ + +KPD F +V+++ A+L
Sbjct: 409 NLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRH 468
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
KWIHG I + + + V TAL++MY+KCG I A ++F + ++ +W ++I G
Sbjct: 469 AKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGT 528
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G AL+LF +M G +P+DIT++ V+SACSH GLVDEG R F +M + Y ++P ++
Sbjct: 529 HGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMD 588
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYG ++DLLGRAG + EA + I +P + +YGA AC+I+ N+++GEK A L
Sbjct: 589 HYGAMVDLLGRAGRIKEAWDFIENMPISPG---ITVYGAXXGACKIHKNIEVGEKAAKKL 645
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++ + +H LLANIYAS ++W V VR+ M++ G++K PGCS +E+ +H F G
Sbjct: 646 FELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSG 705
Query: 580 DPSHSEMKEIYSMLDRM 596
+H + K IY+ L+ +
Sbjct: 706 STTHPQSKRIYAFLEEL 722
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 4/186 (2%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIV--LWTAMINGYVQFNRFDEAVALFREMQIIR 316
T +VS + G + +A +F+ P+ D + L+ M+ GY + + + A+A M+
Sbjct: 85 TKLVSLFSKYGSINEAARVFE--PIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD 142
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+KP + LL C L++GK IHG + N + T ++ MYAKC I+ A
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F + E+D SW +II G + NG KALEL +M G +PD IT + VL A + G
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 437 LVDEGR 442
L+ G+
Sbjct: 263 LLMVGK 268
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/650 (32%), Positives = 350/650 (53%), Gaps = 79/650 (12%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L+ A +FG + L ++N+L+ +AK G F ++L L+ ++ G+ PD +T+P V
Sbjct: 143 GDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVL 202
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ G L ++ +G +VH +V++ G E D V N+++ MY G I + + +FD MP +D +
Sbjct: 203 RTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRI 262
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN ISG+ + + + +F MR+ + PD T+ S +SAC AL + LG+E+H Y
Sbjct: 263 SWNAMISGYFENDVCLEGLRLFFMMREFF-VDPDLMTMTSVISACEALGDERLGREVHGY 321
Query: 216 INQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + + + N+L+ M+ GC EA +F +M K+++ WT+M+SGY G EKA
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKA 381
Query: 275 RDLF--------------------------------------DRSPVRD-IVLWTAMING 295
+ + DR+ + +++ ++I+
Sbjct: 382 VETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDM 441
Query: 296 YVQFNRFDEAVALFR------------------------------EMQIIRLKPDKFILV 325
Y + D+A+ +F + I+ LKP+ LV
Sbjct: 442 YSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLV 501
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L+ CA++GAL GK IH + + D + AL++MY +CG +E A F EK
Sbjct: 502 SVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EK 560
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D ASW ++ G A GK A+ELF +MI PD+ITF +L ACS G+V +G +F
Sbjct: 561 DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYF 620
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+M + I P L+HY ++DLLGRAG L++A E I+K+P + + I +GALL+ACRI
Sbjct: 621 ESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAI---WGALLNACRI 677
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
Y NV++GE A + ++++K ++ LL N+YA + +W++V VR+ M+E + PGCS
Sbjct: 678 YQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSML----DRMAKTLLDSKQNAMEGD 611
+E+ G +H FL GD H ++KEI ++L ++M T L +++ D
Sbjct: 738 WVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDD 787
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 212/437 (48%), Gaps = 42/437 (9%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N LI KG K+L+ ++E VS + TY + + W +G +VH YV K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
T + N+++ M+ G + +F +M ++D+ SWNV + G+ K F++A+++
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYC 235
+ RM + PD T L C L +L G+E+H + I E + NAL+ MY
Sbjct: 183 YHRMLW-VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG + AR +FD MP ++ I W +M+SGY D+ L
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFE----------------NDVCL------- 278
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
E + LF M+ + PD + ++++ C LG G+ +HGY+ + +
Sbjct: 279 --------EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V +LI+M++ G ++A +F ++ KD SWT++I G NG KA+E ++ M
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY----GCLIDLLGRA 471
G PD+IT VLSAC+ GL+D+G M + + L Y LID+ +
Sbjct: 391 EGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFADRTGLTSYVIVANSLIDMYSKC 445
Query: 472 GLLDEAEELIRKIPNEN 488
+D+A E+ +IPN+N
Sbjct: 446 RCIDKALEVFHRIPNKN 462
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 188/415 (45%), Gaps = 44/415 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ + + G N L+ H S G AE +F ++ L+++ +I +
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQM--HSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G K++ ++ + GV PD T V A LG + KG +H + +TGL
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NS++DMY I ++F +P+K+V+SW I G R +A+ F++M
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI--L 491
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
+L P+ T+VS LSAC + L GKEIH + + L F + NALLDMY +CG + A
Sbjct: 492 SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
F+ K+V W +++GY G+ G
Sbjct: 552 WNQFNSC-EKDVASWNILLTGYAQQGK-----------------------GGL------- 580
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATAL 362
AV LF +M + PD+ +LL C++ G + G ++ ++ I + ++
Sbjct: 581 -AVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV 639
Query: 363 IEMYAKCGLIEKALEIFYELR-EKDAASWTSII--CGLAMNGKINKALELFSQMI 414
+++ + G +E A E ++ + D A W +++ C + N ++ EL +Q I
Sbjct: 640 VDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELG---ELAAQHI 691
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 313/523 (59%), Gaps = 34/523 (6%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG----KICNVKKLFDEMPDKDVVSWNV 159
++ ++H +K+G DT I+ + K+F++MP ++ SWN
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 160 SISGHVKCMRFED----AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-- 213
I G + ED A+ +F M + P+ T S L AC ++ GK+IH
Sbjct: 96 IIRGFSESD--EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 153
Query: 214 --RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDE---------MPNKN-----VIC 257
+Y EF +M N L+ MY CG + +AR LF + M ++ ++
Sbjct: 154 ALKYGFGGDEF--VMSN-LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W M+ GY+ G + AR LFD+ R +V W MI+GY F +AV +FREM+ +
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+P+ LV++L ++LG+LE G+W+H Y ++ I +D V+ +ALI+MY+KCG+IEKA+
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F L ++ +W+++I G A++G+ A++ F +M G +P D+ +I +L+ACSHGGL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
V+EGRR+F+ M V ++P++EHYGC++DLLGR+GLLDEAEE I +P + +++I +
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI---WK 447
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
ALL ACR+ GNV+MG+++A +L + DS + L+N+YAS W +V+ +R +MKE
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 558 VRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RK PGCS I+I+G++HEF+V D SH + KEI SML ++ L
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 213/477 (44%), Gaps = 96/477 (20%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPS--HGNLLYAEKIFGSIQSPCLLAYNL 58
+ L QI A + G ++ +++ FC H +L YA KIF + ++N
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 59 LIKAFAKKGSFRKSL---LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+I+ F++ + + L + + + V P+ FT+P V KA G++++G+++HG +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 116 KTGLEFDTYVCNSIMDMYGV---------------------------------------- 135
K G D +V ++++ MY +
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 136 -----LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
LG + LFD+M + VVSWN ISG+ F+DAV+VFR M++G ++ P+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRPNY 274
Query: 191 GTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T+VS L A + L +LELG+ +H Y + ++G+AL+DMY KCG + +A +F+
Sbjct: 275 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 334
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDR--------SPVRDIVLWTAMIN-GYVQFN 300
+P +NVI W++M++G+ GQ A D F + S V I L TA + G V+
Sbjct: 335 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 301 R-------------------------------FDEAVALFREMQIIRLKPDKFILVALLT 329
R DEA M I KPD I ALL
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI---KPDDVIWKALLG 451
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
C G +E GK + I + + D+ AL MYA G + E+ ++EKD
Sbjct: 452 ACRMQGNVEMGKRV-ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 144/295 (48%), Gaps = 15/295 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ A +F ++ ++++N +I ++ G F+ ++ +F ++++ + P+ T V
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A+ LG ++ GE +H Y +G+ D + ++++DMY G I +F+ +P ++V+
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W+ I+G + DA+D F +MRQ + P + ++ L+AC+ +E G+ RY
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQA-GVRPSDVAYINLLTACSHGGLVEEGR---RY 397
Query: 216 INQELE---FTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCG 269
+Q + P + + ++D+ + G L EA E MP K + + W +++ G
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 270 QLEKARD----LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+E + L D P D + A+ N Y + E + M+ ++ D
Sbjct: 458 NVEMGKRVANILMDMVP-HDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/550 (35%), Positives = 317/550 (57%), Gaps = 5/550 (0%)
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+++N +I AF+ G +SL F ++ +G P++ TY V A + + + G+ +H
Sbjct: 91 VSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYDFQWGKHLHAR 150
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
+V+ D V N ++DMY G I K++F+ + + +VV+W ISG E+
Sbjct: 151 IVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEV 210
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLD 232
D+F +MR+ C +M D + + L C N+ +G+++H + + + + +GNA L
Sbjct: 211 YDIFYQMRKDCVIM-DNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLS 269
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY KCG +A F+ M +VI WT+M++ + + G +E+ARD F+R P R+++ W AM
Sbjct: 270 MYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAM 329
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
+ Y Q + ++E + L+ M ++PD V ++ C++L + G I + +
Sbjct: 330 LGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGL 389
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
D V + I +Y++CG IE+A +F ++EK+ SW SI+ G A NG+ K +E+F
Sbjct: 390 GSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQN 449
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M+ G KPD IT+I +LS CSH GLV E + FN+MT+ + I LEH+ C++DL GRAG
Sbjct: 450 MLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAG 509
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
LL A ++I ++P + N ++GALLSACRI+ + +M E L ++ +++ + L
Sbjct: 510 LLKLALDMIDQMPFKPN---ASIWGALLSACRIHHDTEMAELAMKNLLELNTENFESYIL 566
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
LAN Y+S R E V+ VRQ MKE V+K PGCS IE+ +H F D SH ++K+IY
Sbjct: 567 LANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIEVCNRVHVFTANDTSHPQVKDIYKA 626
Query: 593 LDRMAKTLLD 602
L+ + K + D
Sbjct: 627 LEDIVKKIKD 636
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 186/452 (41%), Gaps = 98/452 (21%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+G ++ ++HG K G + + NSI+DMY I +++F + + SWN
Sbjct: 6 VGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSWNCM 65
Query: 161 ISGHVKCMRFEDAVDVFRRMR--------------------------------QGCNLMP 188
I G+ K A+D FR+M QGC P
Sbjct: 66 IYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQ--P 123
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
+ T S LSAC + + + GK +H R + E ++GN L+DMY KCG + ++ +F
Sbjct: 124 NSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVF 183
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
+ + NV+ WTS++SG + G E+ D+F + +D V+
Sbjct: 184 NTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMR-KDCVI------------------- 223
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
D FIL +L C + G+ +HG+ + + V A + MYA
Sbjct: 224 -----------MDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYA 272
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM-----ISGGA---- 418
KCG EKA F + D SWT++I + +G + +A + F++M IS A
Sbjct: 273 KCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGA 332
Query: 419 ----------------------KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+PD ITF+ ++ ACS + G + + +V +
Sbjct: 333 YCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKV-GLGS 391
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ I L R G ++EA+ L I +N
Sbjct: 392 DVSVVNSAITLYSRCGRIEEAQNLFDSIQEKN 423
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 3/236 (1%)
Query: 199 ACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
AC+++ + + ++H ++++ F ++ N+++DMY KC + A ++F + ++
Sbjct: 2 ACSSVGYIRIAHQLHG-LSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLF 60
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
W M+ GY ++ +A D F + P RD V W +I+ + +++ F EM I
Sbjct: 61 SWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQG 120
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+P+ ++L+ CA + + GK +H I +D +V L++MYAKCGLI+ +
Sbjct: 121 CQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASK 180
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+F LRE + +WTS+I G+A G + ++F QM D+ +L C
Sbjct: 181 RVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVC 236
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 167/387 (43%), Gaps = 64/387 (16%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
++++F +++ ++ + LI A GS + +F ++R+ V DNF +
Sbjct: 179 SKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEG 238
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ GE++HG+ VKTG+ V N+ + MY G F+ M DV+SW
Sbjct: 239 ETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTM 298
Query: 161 ISGHVKCMRFEDAVDVFRRM---------------------RQGCNLM---------PDE 190
I+ E A D F RM +G L PD
Sbjct: 299 ITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDW 358
Query: 191 GTVVSTLSACTALKNLELGKEI-HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T V+ + AC+ L +LG +I + + L + N+ + +Y +CG + EA+ LFD
Sbjct: 359 ITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDS 418
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
+ KN+I W S++ GY G+ K + +F
Sbjct: 419 IQEKNLISWNSIMGGYAQNGEGMK-------------------------------VIEIF 447
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAK 368
+ M + KPD +A+L+GC+ G +++ K+ + ++ I+V +++++ +
Sbjct: 448 QNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGR 507
Query: 369 CGLIEKALEIFYELREKDAAS-WTSII 394
GL++ AL++ ++ K AS W +++
Sbjct: 508 AGLLKLALDMIDQMPFKPNASIWGALL 534
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 117/239 (48%), Gaps = 7/239 (2%)
Query: 31 THPSH-GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNF 89
T SH GN+ A F + ++++N ++ A+ + + + L L+ + + V PD
Sbjct: 300 TSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWI 359
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+ + A L K G ++ VK GL D V NS + +Y G+I + LFD +
Sbjct: 360 TFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSI 419
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLEL 208
+K+++SWN + G+ + +++F+ M GC PD T ++ LS C+ ++
Sbjct: 420 QEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCK--PDHITYIAILSGCSHSGLVKE 477
Query: 209 GKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG 264
K + ++ + + + ++D++ + G L A ++ D+MP K N W +++S
Sbjct: 478 AKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSA 536
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE---------------- 373
C+ +G + +HG + + V+ ++I+MY KC I
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 374 ---------------KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+A++ F ++ E+D+ SW +II + +G ++L F +M G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+ +T+ VLSAC++ G+ + V L G L+D+ + GL+D ++
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNG-LVDMYAKCGLIDASK 180
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+ + N V + +L+S +G+
Sbjct: 181 RVFNTLREHN----VVTWTSLISGIAHFGS 206
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 219/665 (32%), Positives = 351/665 (52%), Gaps = 78/665 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K+I +QI + G Q++P N L+ + G+L A ++F I +++YN ++ +A
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSM--YGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+K ++ L LF ++ G+SPD TY + A + +G+++H V+ GL D
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIR 265
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V +++ M G + + K+ F + D+DVV +N I+ + +A + + RMR
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD- 324
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-------------------------- 218
+ + T +S L+AC+ K LE GK IH +I++
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKA 384
Query: 219 -ELEFT-P----IMGNALLDMYCKCGCLSEARELFDEMPNKNV------------ICWTS 260
EL +T P I NA++ Y + EA L+ +M ++ V C S
Sbjct: 385 RELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444
Query: 261 ---------------------------MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
+++ Y CG L +A+++F+ + RD++ W +MI
Sbjct: 445 SAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMI 504
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
G+ Q ++ A LF+EMQ L+PD ++L+GC ALE GK IHG I E+ +
Sbjct: 505 AGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQ 564
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+D + ALI MY +CG ++ A +F+ L+ +D SWT++I G A G+ KA+ELF QM
Sbjct: 565 LDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQM 624
Query: 414 ISGGAKPDD-ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
+ G +P D TF +LSAC+H GLV EG + F++M Y + P +EHYGCL+ LLGRA
Sbjct: 625 QNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRAR 684
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
EAE LI ++P + + + LL ACRI+GN+ + E A K+ +++ + + L
Sbjct: 685 RFQEAETLINQMPFPPDAAV---WETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 741
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+N+YA+A RW+DV +R+ M+ G+RK PG S IE++ IIHEF+ D SH E EIY+
Sbjct: 742 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAE 801
Query: 593 LDRMA 597
L R++
Sbjct: 802 LKRLS 806
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/590 (24%), Positives = 276/590 (46%), Gaps = 66/590 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ + K+I AQ+ + G+ P+ ++ + ++L A ++F + ++++N LI
Sbjct: 43 LPEAKRIHAQMVEAGV--GPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLI 100
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A++G +K+ LF +++ G P+ TY + A E++ G+K+H ++K G +
Sbjct: 101 SCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ 160
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V NS++ MYG G + +++F + +DVVS+N + + + ++ + +F +M
Sbjct: 161 RDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGC 239
+ PD+ T ++ L A T L+ GK IH+ +E L +G AL+ M +CG
Sbjct: 221 SSE-GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGD 279
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A++ F + + DR D+V++ A+I Q
Sbjct: 280 VDSAKQAF---------------------------KGIADR----DVVVYNALIAALAQH 308
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
EA + M+ + ++ +++L C+ ALE GK IH +I+E+ + D +
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI MYA+CG + KA E+FY + ++D SW +II G A +A+ L+ QM S G K
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 420 PDDITFIGVLSACSHGGLVDEGR---------------RFFNTMTEVY-------QIQPK 457
P +TF+ +LSAC++ +G+ N + +Y + Q
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488
Query: 458 LE--------HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
E + +I + G + A +L +++ NE E + ++LS C+ +
Sbjct: 489 FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEAL 548
Query: 510 DMGEKLAA-LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
++G+++ + E D + L N+Y +D NV ++ V
Sbjct: 549 ELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDV 598
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 38/328 (11%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
D T V+ L CT + L K IH + + + + N L++MY KC + +A ++F
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
EMP ++VI W S++S Y G +KA LF+
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFE---------------------------- 117
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
EMQ P+K +++LT C LE GK IH I + D V +L+ MY
Sbjct: 118 ---EMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYG 174
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG + +A ++F + +D S+ +++ A + + L LF QM S G PD +T+I
Sbjct: 175 KCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYIN 234
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
+L A + ++DEG+R E + + L+ + R G +D A++ + I +
Sbjct: 235 LLDAFTTPSMLDEGKRIHKLTVE-EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR 293
Query: 488 NNEIIVPLYGALLSACRIYG-NVDMGEK 514
+ V +Y AL++A +G NV+ E+
Sbjct: 294 D----VVVYNALIAALAQHGHNVEAFEQ 317
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/650 (32%), Positives = 350/650 (53%), Gaps = 79/650 (12%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L+ A +FG + L ++N+L+ +AK G F ++L L+ ++ G+ PD +T+P V
Sbjct: 143 GDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVL 202
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ G L ++ +G +VH +V++ G E D V N+++ MY G I + + +FD MP +D +
Sbjct: 203 RTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRI 262
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN ISG+ + + + +F MR+ + PD T+ S +SAC AL + LG+E+H Y
Sbjct: 263 SWNAMISGYFENDVCLEGLRLFFMMRE-FFVDPDLMTMTSVISACEALGDERLGREVHGY 321
Query: 216 INQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + + + N+L+ M+ GC EA +F +M K+++ WT+M+SGY G EKA
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKA 381
Query: 275 RDLF--------------------------------------DRSPVRD-IVLWTAMING 295
+ + DR+ + +++ ++I+
Sbjct: 382 VETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDM 441
Query: 296 YVQFNRFDEAVALFR------------------------------EMQIIRLKPDKFILV 325
Y + D+A+ +F + I+ LKP+ LV
Sbjct: 442 YSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLV 501
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L+ CA++GAL GK IH + + D + AL++MY +CG +E A F EK
Sbjct: 502 SVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EK 560
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D ASW ++ G A GK A+ELF +MI PD+ITF +L ACS G+V +G +F
Sbjct: 561 DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYF 620
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+M + I P L+HY ++DLLGRAG L++A E I+K+P + + I +GALL+ACRI
Sbjct: 621 ESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAI---WGALLNACRI 677
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
Y NV++GE A + ++++K ++ LL N+YA + +W++V VR+ M+E + PGCS
Sbjct: 678 YQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSML----DRMAKTLLDSKQNAMEGD 611
+E+ G +H FL GD H ++KEI ++L ++M T L +++ D
Sbjct: 738 WVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDD 787
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 212/437 (48%), Gaps = 42/437 (9%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N LI KG K+L+ ++E VS + TY + + W +G +VH YV K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
T + N+++ M+ G + +F +M ++D+ SWNV + G+ K F++A+++
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYC 235
+ RM + PD T L C L +L G+E+H + I E + NAL+ MY
Sbjct: 183 YHRMLW-VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG + AR +FD MP ++ I W +M+SGY D+ L
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFE----------------NDVCL------- 278
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
E + LF M+ + PD + ++++ C LG G+ +HGY+ + +
Sbjct: 279 --------EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V +LI+M++ G ++A +F ++ KD SWT++I G NG KA+E ++ M
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY----GCLIDLLGRA 471
G PD+IT VLSAC+ GL+D+G M + + L Y LID+ +
Sbjct: 391 EGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFADRTGLTSYVIVANSLIDMYSKC 445
Query: 472 GLLDEAEELIRKIPNEN 488
+D+A E+ +IPN+N
Sbjct: 446 RCIDKALEVFHRIPNKN 462
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 188/415 (45%), Gaps = 44/415 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ + + G N L+ H S G AE +F ++ L+++ +I +
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQM--HSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G K++ ++ + GV PD T V A LG + KG +H + +TGL
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NS++DMY I ++F +P+K+V+SW I G R +A+ F++M
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI--L 491
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
+L P+ T+VS LSAC + L GKEIH + + L F + NALLDMY +CG + A
Sbjct: 492 SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
F+ K+V W +++GY G+ G
Sbjct: 552 WNQFNSC-EKDVASWNILLTGYAQQGK-----------------------GGL------- 580
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATAL 362
AV LF +M + PD+ +LL C++ G + G ++ ++ I + ++
Sbjct: 581 -AVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV 639
Query: 363 IEMYAKCGLIEKALEIFYELR-EKDAASWTSII--CGLAMNGKINKALELFSQMI 414
+++ + G +E A E ++ + D A W +++ C + N ++ EL +Q I
Sbjct: 640 VDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELG---ELAAQHI 691
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/511 (37%), Positives = 292/511 (57%), Gaps = 39/511 (7%)
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
DN++ + V G ++H VK GL DT+V N++++MY + +
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 147 DEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
D P D VSWN I+G++ A+ F +M +G +M D+ T+++ L AC
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKG-QVMLDDVTLLNALVACARTC 210
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+++GK H + E MG++L+ MY KCG + +AR +FD MP++N +CWTSM+S
Sbjct: 211 MMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMIS 270
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
GY GQ + EA+ LFR+MQI +K D
Sbjct: 271 GYTQLGQSK-------------------------------EAIKLFRDMQIAGVKVDDAT 299
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ +++ C Q+GAL+ G+++H Y + + + D V +LI+MY+KCG I+KA +IF +
Sbjct: 300 ISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMV 359
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGR 442
++D SWT II G A NG +AL+LF+QM GG P++ITF+GVL++CSHGGLV++G
Sbjct: 360 KRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGY 419
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
R F+ M+ +Y I P++EHYGC++DLLGRA LL EAE+ I+++P + + ++ +LL A
Sbjct: 420 RHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAV---MWRSLLFA 476
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
CR G V + E +A ++ +E LL+ +YA+ +RW D VR + K P
Sbjct: 477 CRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTKQP 536
Query: 563 GCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
GCS IE++G +HEF GD SH E + IYS L
Sbjct: 537 GCSFIEVDGCVHEFFAGDESHFETEAIYSTL 567
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 191/412 (46%), Gaps = 50/412 (12%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ A ++GL + LN L+ C++PS + G+ + +++N +I
Sbjct: 114 QLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDT---VSWNTIIAG 170
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ G K+L FS++ + V D+ T A +K G+ H +V G E +
Sbjct: 171 YIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEIN 230
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
Y+ +S++ MY G++ + +++FD MPD++ V W ISG+ + + ++A+ +FR M Q
Sbjct: 231 CYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDM-Q 289
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLS 241
+ D+ T+ + +S+C + L+LG+ +H Y + L + N+L+DMY KCG +
Sbjct: 290 IAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIK 349
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+A ++F M ++ WT ++ G+ G +A DLF + V+
Sbjct: 350 KAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVM------------- 396
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT- 360
P++ + +LT C+ G +EQ GY + +R++ +A
Sbjct: 397 -----------------PNEITFLGVLTSCSHGGLVEQ-----GYRHFHRMSSIYGIAPR 434
Query: 361 -----ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKA 406
++++ + L+ +A + E+ DA W S++ G++ A
Sbjct: 435 IEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLA 486
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 5/249 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +IF + + + +I + + G ++++ LF ++ GV D+ T V
Sbjct: 245 GQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVV 304
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ G +G + G VH Y GL D V NS++DMY G I +F M +D
Sbjct: 305 SSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNF 364
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG-KEIHR 214
SW V I G +A+D+F +M + +MP+E T + L++C+ +E G + HR
Sbjct: 365 SWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHR 424
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
++ P + + ++D+ + L+EA + EMP + + W S++ CG++
Sbjct: 425 -MSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEV 483
Query: 272 EKARDLFDR 280
A + +R
Sbjct: 484 GLAEYVAER 492
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/597 (35%), Positives = 329/597 (55%), Gaps = 52/597 (8%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL---LAYNLLIKAFAKKGSFRK 71
++ N + K +V S + YA K+F Q P N +IKA+ + +
Sbjct: 5 AIETNVQIFTKFLVISA--SAVGIGYARKLFD--QRPHREDSFLCNSMIKAYLETRHYND 60
Query: 72 SLLLFSKLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
S + LR E ++PDNFT+ + K+ V +G ++H + ++G D YV ++
Sbjct: 61 SFAFYRDLRKETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVV 120
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
DMY GK+ + +FDEMP + VSW I G+V+ + A +F +M Q
Sbjct: 121 DMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQ-------- 172
Query: 191 GTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
+K++ ++ NA++D + K G ++ AR LFDEM
Sbjct: 173 ------------VKDV------------------VIYNAMMDGFVKSGDMTSARRLFDEM 202
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
+K VI WT+M+ GY N ++ AR LFD P R++V W MI GY Q + EA+ LF+
Sbjct: 203 THKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQPQEAIRLFQ 262
Query: 311 EMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
EMQ L PD ++++L + GAL G+W H ++ + V TA+++MY+KC
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVKVCTAILDMYSKC 322
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
G IEKA IF E+ EK ASW ++I G A+NG + AL+LF M + KPD+IT + V+
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTM-AKEEKPDEITMLAVI 381
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
SAC+HGGLV+EGR++F M + + + K+EHYGC++DLLGRAG L +AE LI +P + N
Sbjct: 382 SACNHGGLVEEGRKWFQMMRK-FGLNAKIEHYGCMVDLLGRAGNLKQAEHLITNMPFKPN 440
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
II+ + LSAC Y +++ E++ ++E ++ + LL N+YA+ RW+D V
Sbjct: 441 GIIL---SSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMV 497
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQN 606
+ M++ +K GCS IEIN I+ EF+ GD +H + I+ +L+++ + + + N
Sbjct: 498 KNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHPHRQSIHLVLEKLLVHMKEEEAN 554
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/408 (43%), Positives = 268/408 (65%), Gaps = 5/408 (1%)
Query: 188 PDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEAREL 246
PDE T S L AC L + G+++H ++ + E + N+L+D+Y K GC A++L
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
FDEM ++V+ W +++SGY G ++KAR +FD +++V W+ MI+GY + ++ +A+
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAI 244
Query: 307 ALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
LFR+MQ L P+ LV++L+ CA LGAL+ GKWIH +I N+I V + AL +M
Sbjct: 245 ELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADM 304
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
YAKCG + +A +F+E+ E+D SW+ II GLAM G N+A F++MI G +P+DI+F
Sbjct: 305 YAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISF 364
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
+G+L+AC+H GLVD+G +F+ M +VY I PK+EHYGC++DLL RAG LD+AE LI +P
Sbjct: 365 MGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMP 424
Query: 486 NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWED 545
+ N I+ +GALL CRIY + + GE++ + +++S S LAN+YAS R +D
Sbjct: 425 MQPNVIV---WGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDD 481
Query: 546 VTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+ R +M++ K PGCS IEIN ++EF +GD SH + IYSM+
Sbjct: 482 AASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMI 529
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 187/375 (49%), Gaps = 66/375 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQS-PCLLAYNLL 59
M QL +IQAQI + + + SHGNL ++ IF S P + AYN L
Sbjct: 37 MRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNAL 96
Query: 60 IKAFAKKGSFRKSLLLFSK--LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+KAF++ ++ ++ F+ + +PD +T+ V KA L +V +G+KVH +V K
Sbjct: 97 LKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKY 156
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV------------------ 159
G E + +V NS++D+Y +G C +KLFDEM +DVVSWN
Sbjct: 157 GCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVF 216
Query: 160 -------------SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
ISG+ + ++ DA+++FR+M+ L P++ T+VS LSAC L L
Sbjct: 217 DGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGAL 276
Query: 207 ELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
+LGK IHR+I + ++E +GNAL DMY KCGC+ EA+ +F EM ++VI W+ ++ G
Sbjct: 277 DLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGL 336
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
+ GY +EA F EM L+P+ +
Sbjct: 337 A--------------------------MYGYA-----NEAFNFFAEMIEDGLEPNDISFM 365
Query: 326 ALLTGCAQLGALEQG 340
LLT C G +++G
Sbjct: 366 GLLTACTHAGLVDKG 380
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 5/228 (2%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVG 99
A +F + L++++ +I +A+ + ++ LF +++ E G++P++ T V A
Sbjct: 212 ARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACA 271
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
LG + G+ +H ++ + +E ++ N++ DMY G + K +F EM ++DV+SW++
Sbjct: 272 HLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSI 331
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
I G +A + F M + L P++ + + L+ACT ++ G E + Q
Sbjct: 332 IIMGLAMYGYANEAFNFFAEMIED-GLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQV 390
Query: 220 LEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
TP + + ++D+ + G L +A L + MP NVI W +++ G
Sbjct: 391 YGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 206/657 (31%), Positives = 345/657 (52%), Gaps = 83/657 (12%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H + G L A ++F I +P AYN LI+A++ +G F ++ L+ + V P+ +T+
Sbjct: 43 HIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTF 102
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
PFV KA L ++ G +H + GL D +V +++D+Y + +F +MP
Sbjct: 103 PFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPM 162
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+DVV+WN ++G+ + A+ M+ L P+ T+VS L L G
Sbjct: 163 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTS 222
Query: 212 IHRY-----INQELEFTPIMGNALLDMY--CK---------------------------- 236
+H Y ++Q E ++G ALLDMY CK
Sbjct: 223 VHAYCLRAYLDQNEE-QVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFV 281
Query: 237 -CGCLSEARELFDEM----------------------------------------PNKNV 255
C ++EA LF +M + ++
Sbjct: 282 LCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADL 341
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
S++S Y G + +A LFD ++D + + A+++GYVQ + +EA +F++MQ
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQAC 401
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
++PD +V+L+ C+ L AL+ G+ HG + + ++ + +LI+MYAKCG I+ +
Sbjct: 402 NVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLS 461
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
++F ++ +D SW ++I G ++G +A LF M + G +PDD+TFI +++ACSH
Sbjct: 462 RQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHS 521
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
GLV EG+ +F+TMT Y I P++EHY C++DLL R G LDEA + I+ +P + + V +
Sbjct: 522 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKAD---VRV 578
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
+GALL ACRI+ N+D+G++++ +++K+ + + LL+NI+++A R+++ VR K
Sbjct: 579 WGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKV 638
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDN 612
G +K PGCS IEING +H F+ GD SH +IY LD + L+D K+ + D
Sbjct: 639 KGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNI---LIDIKKLGYQADT 692
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W + ++ GQL AR +FDR P D + A+I Y F A+ L+R M R+
Sbjct: 36 WQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRV 95
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
P+K+ +L C+ L L G+ IH + + D V+TALI++Y +C A
Sbjct: 96 PPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAAN 155
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKAL-ELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F ++ +D +W +++ G A +G + A+ L GG +P+ T + +L
Sbjct: 156 VFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPL----- 210
Query: 437 LVDEGRRFFNTMTEVYQIQPKLE 459
L G F T Y ++ L+
Sbjct: 211 LAQHGALFQGTSVHAYCLRAYLD 233
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 317/550 (57%), Gaps = 37/550 (6%)
Query: 47 SIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
S +P +YN+ I+ FA SL LF + + PD++T PF+ A
Sbjct: 112 SHSAPTAFSYNVAIRFFASSRP-HTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSL 170
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
H + K GL + +S++ MY L +K+FD +P +DVVSWN + + +
Sbjct: 171 ARAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGR 230
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPI 225
+ +FR M + + P+ TV L+AC +L LG+ + + + +E +
Sbjct: 231 VGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL 290
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+G+ALL MY KCG ++EAR +FD + +K+++ W +M++GY G
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGM--------------- 335
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+EA++LF M+I ++PDK L +L+ C+ +GALE G + G
Sbjct: 336 ----------------SNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDG 379
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
Y + + + V TAL++MYAKCG ++KA+E+F ++ K+ ASW ++ICGLA NG+ ++
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDE 439
Query: 406 ALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
A++ F M + G KPDDITFIGVLSAC H GLV +G+R+FN++T +QI PK+EHY C+
Sbjct: 440 AIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCM 499
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLL R+G L+EA + I KIP++ + +++ GALL+ACR NV++GE++ + ++E
Sbjct: 500 VDLLARSGHLEEAWDFIEKIPDKVDAVML---GALLAACRKCKNVEIGERVINRIIQLEP 556
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+S + + + IYAS++R +D +R M+E GV K PGCS +E++G + EF GD
Sbjct: 557 TNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEFYAGDEPQH 616
Query: 585 EMKEIYSMLD 594
++Y +LD
Sbjct: 617 GADDMYQVLD 626
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 194/389 (49%), Gaps = 46/389 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ A + +IGL + T++ L+ ++ A K+F I + ++++N ++KA+
Sbjct: 172 RAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGA--ARKVFDGIPTRDVVSWNAMMKAYG 229
Query: 65 KKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G + +F + + G V+P+ T V A G++ G V + +E D+
Sbjct: 230 RVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDS 289
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V ++++ MY G+I +++FD + DKD+V+WN I+G+ + +A+ +F MR
Sbjct: 290 LVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIA 349
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSE 242
+ PD+ T+ LSAC+A+ LELG E+ Y ++ ++ + +G AL+DMY KCG L +
Sbjct: 350 -GMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDK 408
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN-R 301
A E+F +MP KNV W +++ G + FN R
Sbjct: 409 AIEVFRKMPCKNVASWNALICG--------------------------------LAFNGR 436
Query: 302 FDEAVALFREMQIIR----LKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDA 356
DEA+ F Q++R LKPD + +L+ C G ++ GK W + E +I
Sbjct: 437 GDEAIQHF---QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKI 493
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREK 385
+ ++++ A+ G +E+A + ++ +K
Sbjct: 494 EHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 15/288 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F +I ++A+N +I +A+ G +++ LF +R G+ PD T V
Sbjct: 303 GEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVL 362
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +G ++ G ++ GY + GL + YV +++DMY G + ++F +MP K+V
Sbjct: 363 SACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVA 422
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G R ++A+ F+ MR L PD+ T + LSAC ++ GK
Sbjct: 423 SWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNS 482
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ E + P + + ++D+ + G L EA + +++P+K + + ++++ C +E
Sbjct: 483 LTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVE 542
Query: 273 KARDLFDR----SPVRDIVLWTAMING--YVQFNRFDEAV---ALFRE 311
+ +R P W +++ Y +R D++ L RE
Sbjct: 543 IGERVINRIIQLEPTNS---WNYVVSSKIYASSDRLDDSAKMRGLMRE 587
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 317/550 (57%), Gaps = 37/550 (6%)
Query: 47 SIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
S +P +YN+ I+ FA SL LF + + PD++T PF+ A
Sbjct: 112 SHSAPTAFSYNVAIRFFASSRP-HTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSL 170
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
H + K GL + +S++ MY L +K+FD +P +DVVSWN + + +
Sbjct: 171 ARAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGR 230
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPI 225
+ +FR M + + P+ TV L+AC +L LG+ + + + +E +
Sbjct: 231 VGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL 290
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+G+ALL MY KCG ++EAR +FD + +K+++ W +M++GY G
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGM--------------- 335
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+EA++LF M+I ++PDK L +L+ C+ +GALE G + G
Sbjct: 336 ----------------SNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDG 379
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
Y + + + V TAL++MYAKCG ++KA+E+F ++ K+ ASW ++ICGLA NG+ ++
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDE 439
Query: 406 ALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
A++ F M + G KPDDITFIGVLSAC H GLV +G+R+FN++T +QI PK+EHY C+
Sbjct: 440 AIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCM 499
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLL R+G L+EA + I KIP++ + +++ GALL+ACR NV++GE++ + ++E
Sbjct: 500 VDLLARSGHLEEAWDFIEKIPDKVDAVML---GALLAACRKCKNVEIGERVINRIIQLEP 556
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+S + + + IYAS++R +D +R M+E GV K PGCS +E++G + EF GD
Sbjct: 557 TNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEFYAGDEPQH 616
Query: 585 EMKEIYSMLD 594
++Y +LD
Sbjct: 617 GADDMYQVLD 626
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 194/389 (49%), Gaps = 46/389 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ A + +IGL + T++ L+ ++ A K+F I + ++++N ++KA+
Sbjct: 172 RAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGA--ARKVFDGIPTRDVVSWNAMMKAYG 229
Query: 65 KKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G + +F + + G V+P+ T V A G++ G V + +E D+
Sbjct: 230 RVGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDS 289
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V ++++ MY G+I +++FD + DKD+V+WN I+G+ + +A+ +F MR
Sbjct: 290 LVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIA 349
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSE 242
+ PD+ T+ LSAC+A+ LELG E+ Y ++ ++ + +G AL+DMY KCG L +
Sbjct: 350 -GMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDK 408
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN-R 301
A E+F +MP KNV W +++ G + FN R
Sbjct: 409 AIEVFRKMPCKNVASWNALICG--------------------------------LAFNGR 436
Query: 302 FDEAVALFREMQIIR----LKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDA 356
DEA+ F Q++R LKPD + +L+ C G ++ GK W + E +I
Sbjct: 437 GDEAIQHF---QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKI 493
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREK 385
+ ++++ A+ G +E+A + ++ +K
Sbjct: 494 EHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 15/288 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F +I ++A+N +I +A+ G +++ LF +R G+ PD T V
Sbjct: 303 GEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVL 362
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +G ++ G ++ GY + GL + YV +++DMY G + ++F +MP K+V
Sbjct: 363 SACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVA 422
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G R ++A+ F+ MR L PD+ T + LSAC ++ GK
Sbjct: 423 SWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNS 482
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ E + P + + ++D+ + G L EA + +++P+K + + ++++ C +E
Sbjct: 483 LTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVE 542
Query: 273 KARDLFDR----SPVRDIVLWTAMING--YVQFNRFDEAV---ALFRE 311
+ +R P W +++ Y +R D++ L RE
Sbjct: 543 IGERVINRIIQLEPTNS---WNYVVSSKIYASSDRLDDSAKMRGLMRE 587
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/593 (33%), Positives = 334/593 (56%), Gaps = 38/593 (6%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
IF + + +P + N ++ + G L YA ++F + ++Y +I F++ +
Sbjct: 122 SIFDVCPRSDPVSYN--VMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECW 179
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+++ LF ++R GV P+ T + A G + +HG V+K E V ++
Sbjct: 180 NQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNL 239
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM--------- 180
+ MY V + + LFDEMP+K++VSWNV ++G+ K + A VF R+
Sbjct: 240 LRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWG 299
Query: 181 ----------RQGCNLM-----------PDEGTVVSTLSACTALKNLELGKEI-HRYINQ 218
R LM P++ +V +S C + G+++ +
Sbjct: 300 TIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKM 359
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
+ + + ++ +Y CG ++EA F +NV W ++++GYV +++A +LF
Sbjct: 360 GFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELF 419
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+ P RD+ W+ MI+GY Q + + A+ LF +M +KP++ +V++L+ A G L+
Sbjct: 420 NEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLK 479
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA--ASWTSIICG 396
+G+W H Y++ N ITV ++ A+I+MYAKCG I ALE+FYE+REK + + W +IICG
Sbjct: 480 EGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICG 539
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
LA++G N +L++FS + K + ITFIGVL+AC H GLV+ G+R F +M + I P
Sbjct: 540 LAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDP 599
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
++HYGC++DLLGRAG L+EAEE+IR +P + + +I +G LL+ACR +GNVD+GE+ A
Sbjct: 600 DIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVI---WGTLLAACRTHGNVDVGERAA 656
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
L ++E + LL+N+YA A +WED VR+ M+ ++++PG S + +
Sbjct: 657 ENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQRLPGYSGVAL 709
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/548 (29%), Positives = 278/548 (50%), Gaps = 86/548 (15%)
Query: 38 LLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA 97
+L +IF ++P L N L+ + F L+L S L+ F +F
Sbjct: 33 ILKIPQIFQQQENP-FLHLNSLLNPKTGQRHFNYELVLVSALK--------FCSDHLF-- 81
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
+ +G+++H V K+GL + ++ NS+++MYG G + + K +FD P D VS+
Sbjct: 82 ------LSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSY 135
Query: 158 NVSISGHVK-------CMRFED------------------------AVDVFRRMRQGCNL 186
NV ISG+VK C F++ AV++F++MR +
Sbjct: 136 NVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRN-VGV 194
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQEL--EFTPIMGNALLDMYCKCGCLSEAR 244
+P+E T+ + +SA + + + +H + + L EF + N LL MYC C L EAR
Sbjct: 195 VPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTN-LLRMYCVCSSLVEAR 253
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
LFDEMP KN++ W M++GY G ++ AR +F+R P +D+V W +I+GYV+ R +E
Sbjct: 254 ALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINE 313
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW--------------------IH 344
A+ ++R M +P+ ++V L++GC + A+ +G+ IH
Sbjct: 314 ALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIH 373
Query: 345 -----GYINEN----RITVDAVVAT--ALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
G INE RI VA+ ALI Y + +I++A+E+F E+ E+D SW+++
Sbjct: 374 LYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTM 433
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I G N + N ALELF +M++ G KP+++T + VLSA + G + EG R+ +
Sbjct: 434 ISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEG-RWAHEYVHNNS 492
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I +ID+ + G ++ A E+ +I E + P + A++ ++G+ ++
Sbjct: 493 ITVSDNLSAAIIDMYAKCGSINNALEVFYEI-REKASTVSP-WNAIICGLAVHGHANLSL 550
Query: 514 KLAALLEK 521
K+ + LE+
Sbjct: 551 KIFSDLER 558
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/501 (37%), Positives = 304/501 (60%), Gaps = 6/501 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDM-YGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+K +K+H +++KTGL T + ++ G I LF +P ++ WN I
Sbjct: 38 MKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAYLLFTTIPSPNLYCWNTIIR 97
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELE 221
G + A+ +F M +++P T S A L G ++H R + LE
Sbjct: 98 GFSRSSTPHLAISLFVDMLCS-SVLPQRLTYPSVFKAYAQLGAGYDGAQLHGRVVKLGLE 156
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ N ++ MY G LSEAR +FDE+ + +V+ SM+ G CG+++K+R LFD
Sbjct: 157 KDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVDKSRRLFDNM 216
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P R V W +MI+GYV+ R EA+ LFR+MQ R++P +F +V+LL+ CA LGAL+ G+
Sbjct: 217 PTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAHLGALKHGE 276
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
W+H Y+ ++ +V TA+I+MY KCG+I KA+E+F + + W SII GLA+NG
Sbjct: 277 WVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSIIIGLALNG 336
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
KA+E FS++ + KPD ++FIGVL+AC + G V + R +F+ M Y+I+P ++HY
Sbjct: 337 YERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYEIEPSIKHY 396
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++++LG+A LL+EAE+LI+ +P + + II +G+LLS+CR +GNV++ ++ A + +
Sbjct: 397 TCMVEVLGQAALLEEAEQLIKGMPLKADFII---WGSLLSSCRKHGNVEIAKRAAQRVCE 453
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+ D+S + L++N+ A++N++E+ R M+E K PGCSSIE+ G +HEFL G
Sbjct: 454 LNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIELYGEVHEFLAGGR 513
Query: 582 SHSEMKEIYSMLDRMAKTLLD 602
H + +EIY +L+ + L D
Sbjct: 514 LHPKAREIYYLLNDSSFALQD 534
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 217/440 (49%), Gaps = 67/440 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M L++I A I + GL + ++++ FC S G++ YA +F +I SP L +N +I
Sbjct: 38 MKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSS-GDINYAYLLFTTIPSPNLYCWNTII 96
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ F++ + ++ LF + V P TYP VFKA LG G ++HG VVK GLE
Sbjct: 97 RGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYDGAQLHGRVVKLGLE 156
Query: 121 FDTYVCNSIMDMY---GVL----------------------------GKICNVKKLFDEM 149
D ++ N+I+ MY G+L G++ ++LFD M
Sbjct: 157 KDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVDKSRRLFDNM 216
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P + V+WN ISG+V+ R +A+++FR+M QG + P E T+VS LSAC L L+ G
Sbjct: 217 PTRTRVTWNSMISGYVRNKRLMEALELFRKM-QGERVEPSEFTMVSLLSACAHLGALKHG 275
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ +H Y+ + E I+ A++DMYCKCG + +A E+F+ P + + CW S++ G
Sbjct: 276 EWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSIIIGLA-- 333
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
+NGY + +A+ F +++ LKPD + +L
Sbjct: 334 ------------------------LNGYER-----KAIEYFSKLEASDLKPDHVSFIGVL 364
Query: 329 TGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-D 386
T C +GA+ + + + +N+ I T ++E+ + L+E+A ++ + K D
Sbjct: 365 TACKYIGAVGKARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKAD 424
Query: 387 AASWTSIICGLAMNGKINKA 406
W S++ +G + A
Sbjct: 425 FIIWGSLLSSCRKHGNVEIA 444
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 317/550 (57%), Gaps = 37/550 (6%)
Query: 47 SIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
S +P +YN+ I+ FA SL LF + + PD++T PF+ A
Sbjct: 112 SHSAPTAFSYNVAIRFFASSRP-HTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSL 170
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
H + K GL + +S++ MY L +K+FD +P +DVVSWN + + +
Sbjct: 171 ARAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGR 230
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPI 225
+ +FR M + + P+ TV L+AC +L LG+ + + + +E +
Sbjct: 231 VGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL 290
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+G+ALL MY KCG ++EAR +FD + +K+++ W +M++GY G
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGM--------------- 335
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+EA++LF M+I ++PDK L +L+ C+ +GALE G + G
Sbjct: 336 ----------------SNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDG 379
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
Y + + + V TAL++MYAKCG ++KA+E+F ++ K+ ASW ++ICGLA NG+ ++
Sbjct: 380 YASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDE 439
Query: 406 ALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
A++ F M + G KPDDITFIGVLSAC H GLV +G+R+FN++T +QI PK+EHY C+
Sbjct: 440 AIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCM 499
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLL R+G L+EA + I KIP++ + +++ GALL+ACR NV++GE++ + ++E
Sbjct: 500 VDLLARSGHLEEAWDFIEKIPDKVDAVML---GALLAACRKCKNVEIGERVINRIIQLEP 556
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+S + + + IYAS++R +D +R M+E GV K PGCS +E++G + EF GD
Sbjct: 557 TNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEFYAGDEPQH 616
Query: 585 EMKEIYSMLD 594
++Y +LD
Sbjct: 617 GADDMYQVLD 626
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 194/389 (49%), Gaps = 46/389 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ A + +IGL + T++ L+ ++ A K+F I + ++++N ++KA+
Sbjct: 172 RAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGA--ARKVFDGIPTRDVVSWNAMMKAYG 229
Query: 65 KKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G + +F + + G V+P+ T V A G++ G V + +E D+
Sbjct: 230 RVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDS 289
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V ++++ MY G+I +++FD + DKD+V+WN I+G+ + +A+ +F MR
Sbjct: 290 LVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIA 349
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSE 242
+ PD+ T+ LSAC+A+ LELG E+ Y ++ ++ + +G AL+DMY KCG L +
Sbjct: 350 -GMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDK 408
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN-R 301
A E+F +MP KNV W +++ G + FN R
Sbjct: 409 AIEVFRKMPCKNVASWNALICG--------------------------------LAFNGR 436
Query: 302 FDEAVALFREMQIIR----LKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDA 356
DEA+ F Q++R LKPD + +L+ C G ++ GK W + E +I
Sbjct: 437 GDEAIQHF---QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKI 493
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREK 385
+ ++++ A+ G +E+A + ++ +K
Sbjct: 494 EHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 15/288 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F +I ++A+N +I +A+ G +++ LF +R G+ PD T V
Sbjct: 303 GEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVL 362
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +G ++ G ++ GY + GL + YV +++DMY G + ++F +MP K+V
Sbjct: 363 SACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVA 422
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G R ++A+ F+ MR L PD+ T + LSAC ++ GK
Sbjct: 423 SWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNS 482
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ E + P + + ++D+ + G L EA + +++P+K + + ++++ C +E
Sbjct: 483 LTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVE 542
Query: 273 KARDLFDR----SPVRDIVLWTAMING--YVQFNRFDEAV---ALFRE 311
+ +R P W +++ Y +R D++ L RE
Sbjct: 543 IGERVINRIIQLEPTNS---WNYVVSSKIYASSDRLDDSAKMRGLMRE 587
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/509 (37%), Positives = 298/509 (58%), Gaps = 40/509 (7%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK---ICNVKKLFDEMPDKDVVSWNVSISGH 164
++ H +++KTGL DT+ + ++ + + + + + + + N I +
Sbjct: 26 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIESPNGFTHNSVIRAY 85
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH----------- 213
E A+ VFR M G + PD+ + L AC A E G++IH
Sbjct: 86 ANSSTPEIALTVFREMLLG-PVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMKSDLVTD 144
Query: 214 -----RYIN------------QELEFTPIMG----NALLDMYCKCGCLSEARELFDEMPN 252
IN + L+ P+ N+LL Y G + EAR LFDEM
Sbjct: 145 VFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDEMEE 204
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
+NV W M+SGY G +++AR++FD PV+D+V W AM+ Y ++E + +F M
Sbjct: 205 RNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMM 264
Query: 313 -QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
+PD F LV +L+ CA LG+L QG+W+H YI+++ I ++ VATAL++MY+KCG
Sbjct: 265 LDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGK 324
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
I+KALE+F + ++D ++W SII GL+++G ALE+FS+M+ G KP+ ITFIGVLSA
Sbjct: 325 IDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 384
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
C+H GL+D+ R+ F M VY I+P +EHYGC++DLLGR G +EAEEL+ ++P + I
Sbjct: 385 CNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASI 444
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
++ +LL AC+ +G ++ E++A L + ++SS + ++N+YAS RW++ VR
Sbjct: 445 LLE---SLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRG 501
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
KM+ V+K PGCS IE++G++HEFL G+
Sbjct: 502 KMRAERVKKNPGCSMIEVDGVVHEFLAGE 530
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 132/552 (23%), Positives = 228/552 (41%), Gaps = 132/552 (23%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFC-THPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +++Q A + + GL + + +KL+ F T+P + YA I I+SP +N +
Sbjct: 22 LLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIESPNGFTHNSV 81
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+A+A + +L +F ++ V PD +++ FV KA ++G ++HG +K+ L
Sbjct: 82 IRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMKSDL 141
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V N+++++YG G +K+ D MP +D VSWN +S ++ E+A +F
Sbjct: 142 VTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDE 201
Query: 180 MRQ-----------------------------------------------GC-------- 184
M + GC
Sbjct: 202 MEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVF 261
Query: 185 NLMPDEG-------TVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCK 236
N+M D+ T+V+ LSAC +L +L G+ +H YI++ +E + AL+DMY K
Sbjct: 262 NMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSK 321
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG + +A E+F + ++V W S+++G G L K
Sbjct: 322 CGKIDKALEVFRDTSKRDVSTWNSIITGLSVHG-LGK----------------------- 357
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+A+ +F EM KP+ + +L+ C +G L+Q
Sbjct: 358 -------DALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQ----------------- 393
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
A L EM IE +E + ++ L GK +A EL +++ +
Sbjct: 394 --ARKLFEMMNSVYGIEPTIE-----------HYGCMVDLLGRMGKFEEAEELVNEVPAD 440
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH-YGCLIDLLGRAGLLD 475
A I +L AC G +++ R N + E P+ Y + +L G D
Sbjct: 441 EAS---ILLESLLGACKRFGKLEQAERIANRLLES---NPRESSGYVQMSNLYASHGRWD 494
Query: 476 EAEELIRKIPNE 487
EA E+ K+ E
Sbjct: 495 EAMEVRGKMRAE 506
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/447 (40%), Positives = 274/447 (61%), Gaps = 33/447 (7%)
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+ + SWNV+I G + +AV +++R+ Q PD T AC L + +G
Sbjct: 112 NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGS 171
Query: 211 EIHRYI-NQELEFTPIMGNALLDMYCKCG---------------------------C--L 240
EI ++ + + + NA++ + CG C L
Sbjct: 172 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYCGNL 231
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
AR+LFD M NK ++ WT+MV GY G L+ A LFD P +D+V W AMI GYV N
Sbjct: 232 ESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHAN 291
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
R EA+ALF EMQ + + PD+ +V+ L+ C+QLGAL+ G WIH YI ++ ++++ + T
Sbjct: 292 RGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGT 351
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MYAKCG I KA+++F EL +++ +WT+II GLA++G + A+ FS+MI P
Sbjct: 352 ALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMP 411
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D++TF+G+LSAC HGGLV+EGR++F+ M+ + + PKL+HY C++DLLGRAGLL+EAEEL
Sbjct: 412 DEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEEL 471
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+ +P E + ++ +GAL ACRI+GNV MGE+ A+ L +++ DS + LLAN+Y A
Sbjct: 472 IKSMPIEADAVV---WGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEA 528
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSI 567
W++ R+ M++ GV K P S+
Sbjct: 529 EMWKEAGKARKLMRQRGVEKTPDSWSL 555
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 219/467 (46%), Gaps = 96/467 (20%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
++QLKQIQ+Q+ GL ++ ++L+ FC +L Y I + ++P ++N+ I
Sbjct: 63 ISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAI 122
Query: 61 KAFAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ F + R++++L+ + L+ G PDN+TYP +FKA L ++ G ++ G+V+ G
Sbjct: 123 RGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGF 182
Query: 120 EFDTYVCNSIMDMY-----------------------------GVLGKICNVKKLFDEM- 149
+ D +V N+++ + G G + + +KLFD M
Sbjct: 183 DSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYCGNLESARKLFDSMT 242
Query: 150 ------------------------------PDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
PDKDVV WN I G+V R ++A+ +F
Sbjct: 243 NKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNE 302
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
M Q N+ PDE T+VS LSAC+ L L++G IH YI + EL +G AL+DMY KCG
Sbjct: 303 M-QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCG 361
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+++A ++F E+P +N + WT+++SG G
Sbjct: 362 KITKAIQVFQELPGRNSLTWTAIISGLALHGNAHG------------------------- 396
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAV 357
A+A F EM + PD+ + LL+ C G +E+G K+ ++ ++
Sbjct: 397 ------AIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLK 450
Query: 358 VATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
+ ++++ + GL+E+A E+ + E DA W ++ ++G +
Sbjct: 451 HYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNV 497
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/572 (35%), Positives = 317/572 (55%), Gaps = 66/572 (11%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK--- 116
+++ + FR+++ + ++ G PDNF +P V KAV L ++K GE++H VK
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 117 ------------------TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
G+ T+ N++M MY LG++ + K LF+ D+D+VSWN
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWN 183
Query: 159 VSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI- 216
IS + RF +A+ FR M +G L D T+ S L AC+ L+ L++GKEIH Y+
Sbjct: 184 TMISSFSQSDRFSEALAFFRLMVLEGVEL--DGVTIASVLPACSHLERLDVGKEIHAYVL 241
Query: 217 -NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
N +L +G+AL+DMYC NC Q+E R
Sbjct: 242 RNNDLIENSFVGSALVDMYC-------------------------------NCRQVESGR 270
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQ- 333
+FD R I LW AMI+GY + ++A+ LF EM ++ L P+ + +++ C
Sbjct: 271 RVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHS 330
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
L A+ +GK IH Y N + D V +AL++MYAKCG + + +F E+ K+ +W +
Sbjct: 331 LAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVL 390
Query: 394 ICGLAMNGKINKALELFSQMIS-----GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
I M+GK +ALELF M++ G AKP+++TFI V +ACSH GL+ EG F M
Sbjct: 391 IMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRM 450
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+ ++P +HY C++DLLGRAG L+EA EL+ +P E ++ V + +LL ACRI+ N
Sbjct: 451 KHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDK--VGAWSSLLGACRIHQN 508
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
V++GE A L +E +S + LL+NIY+SA W VR+ M++MGV+K PGCS IE
Sbjct: 509 VELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIE 568
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+H+F+ GD SH + ++++ L+ +++ +
Sbjct: 569 FRDEVHKFMAGDVSHPQSEQLHGFLETLSEKM 600
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 188/386 (48%), Gaps = 34/386 (8%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G+ T N LM + G + ++ +F S ++++N +I +F++ F ++L
Sbjct: 143 GIGDKTFTNNALMAM--YAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALA 200
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDMY 133
F + GV D T V A L + G+++H YV++ L +++V ++++DMY
Sbjct: 201 FFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMY 260
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
++ + +++FD + + + WN ISG+ + E A+ +F M + L+P+ T+
Sbjct: 261 CNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTM 320
Query: 194 VSTLSACT-ALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
S + AC +L + GKEIH Y I L +G+AL+DMY KCGCL+ +R +F+EMP
Sbjct: 321 ASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP 380
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
NKNVI W ++ G+ E+A +LF N + R EA
Sbjct: 381 NKNVITWNVLIMACGMHGKGEEALELFK--------------NMVAEAGRGGEA------ 420
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCG 370
KP++ + + C+ G + +G + +++ + + ++++ + G
Sbjct: 421 ------KPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAG 474
Query: 371 LIEKALEIFYELREK--DAASWTSII 394
+E+A E+ + + +W+S++
Sbjct: 475 QLEEAYELVNTMPAEFDKVGAWSSLL 500
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
SP R W + + N F EA++ + EM + +PD F A+L + L L+ G
Sbjct: 52 SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 341 KWIH------GYINENRITVDAVV---------------ATALIEMYAKCGLIEKALEIF 379
+ IH GY + + + +V AL+ MYAK G ++ + +F
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
++D SW ++I + + + ++AL F M+ G + D +T VL ACSH +D
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231
Query: 440 EGR 442
G+
Sbjct: 232 VGK 234
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/499 (39%), Positives = 295/499 (59%), Gaps = 12/499 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICN----VKKLFDEMPDKDVVSWNVSISG 163
+++H ++KTGL D+Y + + + + + +FD D WN+ I G
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLS-FCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
E ++ +++RM C+ P T S L AC+ L E +IH I + E
Sbjct: 90 FSCSDEPERSLLLYQRML--CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
N+L++ Y G A LFD +P + + W S++ GYV G+++ A LF +
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
++ + WT MI+GYVQ + EA+ LF EMQ ++PD L L+ CAQLGALEQGK
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
WIH Y+N+ RI +D+V+ LI+MYAKCG +E+ALE+F +++K +WT++I G A +G
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+A+ F +M G KP+ ITF VL+ACS+ GLV+EG+ F +M Y ++P +EHY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++DLLGRAGLLDEA+ I+++P + N +I +GALL ACRI+ N+++GE++ +L
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI---WGALLKACRIHKNIELGEEIGEILIA 444
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
I+ + ANI+A +W+ R+ MKE GV KVPGCS+I + G HEFL GD
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 504
Query: 582 SHSEMKEIYSMLDRMAKTL 600
SH E+++I S M + L
Sbjct: 505 SHPEIEKIQSKWRIMRRKL 523
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 207/442 (46%), Gaps = 71/442 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYNLLIK 61
+LKQI A++ + GL Q+ + K + FC + + L YA+ +F P +NL+I+
Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
F+ +SLLL+ ++ + +T+P + KA L ++ ++H + K G E
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D Y NS+++ Y V G LFD +P+ D VSWN I G+VK + + A+ +FR+M
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 182 ------------------------------QGCNLMPDEGTVVSTLSACTALKNLELGKE 211
Q ++ PD ++ + LSAC L LE GK
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 212 IHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH Y+N+ + ++G L+DMY KCG + EA E+F + K+V WT+++SGY G
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
EA++ F EMQ + +KP+ A+LT
Sbjct: 329 GR-------------------------------EAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELREK-DA 387
C+ G +E+GK I Y E + + ++++ + GL+++A E+ K +A
Sbjct: 358 CSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNA 416
Query: 388 ASWTSIICGLAMNGKINKALEL 409
W +++ +I+K +EL
Sbjct: 417 VIWGALLKAC----RIHKNIEL 434
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/494 (39%), Positives = 299/494 (60%), Gaps = 13/494 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+++ Y ++ G+E + S++ + I KLFD +P V +N I +
Sbjct: 5 KQIQAYTLRNGIEHTKQLIVSLLQ----IPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60
Query: 168 MRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
++ +M QGC+ P+E + SAC +L + + G+ +H ++
Sbjct: 61 GPHHQCFSLYTQMCLQGCS--PNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVF 118
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
AL+DMY K G LS AR+ FDEM ++V W SM++GY CG LE A +LF P R+
Sbjct: 119 ALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARN 178
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ WTAMI+GY Q ++ +A+++F M+ ++P++ L ++L CA LGALE G+ I
Sbjct: 179 VTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIE 238
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
Y N + V+ AL+EMYA+CG I+KA +F E+ ++ SW S+I GLA++G+
Sbjct: 239 VYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRC 298
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
++A+ELF +M+ GA PDD+TF+GVL AC+HGG+V EG+ FF +M + I PKLEHYGC
Sbjct: 299 DEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGC 358
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLLGRAG L EA +LI ++P E + ++ +G LL AC +G+V++ EK A L ++E
Sbjct: 359 MVDLLGRAGELREAHDLILRMPMEPDSVV---WGTLLGACSFHGHVELAEKAAGALFELE 415
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
+ + +L+NIYA+A RW+ V +R+ MK + K G S IE G IH+F+V D SH
Sbjct: 416 PSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSH 475
Query: 584 SEMKEIYSMLDRMA 597
S EIY++LD ++
Sbjct: 476 SRSDEIYALLDEVS 489
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 200/446 (44%), Gaps = 82/446 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LKQIQA + G++ + + L+ + P YA K+F I P + YN LI
Sbjct: 1 MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIP------YAHKLFDFIPKPTVFLYNKLI 54
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A++ G + L++++ +G SP+ ++ F+F A L ++G +H + VK+G
Sbjct: 55 QAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFG 114
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR-- 178
D + +++DMY LG + +K FDEM +DV +WN I+G+ +C E A+++FR
Sbjct: 115 CDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLM 174
Query: 179 -----------------------------RMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
M + + P+E T+ S L AC L LE+G
Sbjct: 175 PARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVG 234
Query: 210 KEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVIC-WTSMVSGYVN 267
+ I Y F + + NALL+MY +CG + +A +F+E+ + +C W SM+ G
Sbjct: 235 ERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAV 294
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G R DEA+ LF +M PD V +
Sbjct: 295 HG-------------------------------RCDEAIELFYKMLREGAAPDDVTFVGV 323
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATAL------IEMYAKCGLIEKALEIFYE 381
L C G + +G+ H + + R D +A L +++ + G + +A ++
Sbjct: 324 LLACTHGGMVVEGQ--HFFESMER---DFSIAPKLEHYGCMVDLLGRAGELREAHDLILR 378
Query: 382 L-REKDAASWTSIICGLAMNGKINKA 406
+ E D+ W +++ + +G + A
Sbjct: 379 MPMEPDSVVWGTLLGACSFHGHVELA 404
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/498 (38%), Positives = 311/498 (62%), Gaps = 5/498 (1%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDM-YGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+K +K+H ++KTGL DT + I+ G I +F ++ + ++ +WN I
Sbjct: 35 MKDLKKIHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQIQNPNIFAWNTIIR 94
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELE 221
G + ++++ ++ M + P T S A L G ++H + I LE
Sbjct: 95 GFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLE 154
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ N +L MY CG SEAR++FD + +++ W +M+ G CG ++++R LFD+
Sbjct: 155 NDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKM 214
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
+R+ V W +MI+GYV+ RF +A+ LF++MQ+ R++P +F +V+LL CA LGA+ QG+
Sbjct: 215 SLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGE 274
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
WIH Y+ + + ++ +V TA+I+MY+KCG I+KA+++F + + W S+I GLAMNG
Sbjct: 275 WIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNG 334
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ N+AL+LFS + S +PDD++FI VL+AC H G+VD+ + +F M + Y+I+P ++H+
Sbjct: 335 QENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHF 394
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++D+LGRAGLL+EAEELIR + + + II +G+LL +C YGN+ M ++ A L +
Sbjct: 395 SCMVDVLGRAGLLEEAEELIRSMHVDPDAII---WGSLLWSCCKYGNIKMAKRAANHLIE 451
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+ +SS L+AN YA+AN +E+ R +KE + K PGCS IE+ G +HEF+ G
Sbjct: 452 LNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIEVGGEVHEFVAGGR 511
Query: 582 SHSEMKEIYSMLDRMAKT 599
+H E+KEIY +LD + T
Sbjct: 512 AHPEIKEIYRVLDVLTLT 529
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 222/449 (49%), Gaps = 68/449 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LK+I +Q+ + GL ++ ++++ FC P+ G++ YA +F IQ+P + A+N +I
Sbjct: 35 MKDLKKIHSQLIKTGLAKDTNAASRILAFCASPA-GDINYAYLVFVQIQNPNIFAWNTII 93
Query: 61 KAFAKKGSFRKSLLLF-SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ F++ + S+ L+ L V P TYP VFKA L +G ++HG ++K GL
Sbjct: 94 RGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGL 153
Query: 120 EFDTYVCNSIMDMY-----------------------------GVL--GKICNVKKLFDE 148
E D+++ N+I+ MY GV G + ++LFD+
Sbjct: 154 ENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDK 213
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
M ++ VSWN ISG+V+ RF DA+++F++M Q + P E T+VS L+AC L +
Sbjct: 214 MSLRNAVSWNSMISGYVRNGRFFDALELFQKM-QVERIEPSEFTMVSLLNACACLGAIRQ 272
Query: 209 GKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+ IH Y + ++ E PI+ A++DMY KCG + +A ++F P + + CW SM+ G
Sbjct: 273 GEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAM 332
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
GQ +EA+ LF +Q L+PD +A+
Sbjct: 333 NGQE-------------------------------NEALQLFSVLQSSDLRPDDVSFIAV 361
Query: 328 LTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EK 385
LT C G +++ K + ++ +I + ++++ + GL+E+A E+ + +
Sbjct: 362 LTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDP 421
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMI 414
DA W S++ G I A + +I
Sbjct: 422 DAIIWGSLLWSCCKYGNIKMAKRAANHLI 450
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 333/594 (56%), Gaps = 38/594 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K I + ++G +P + N L+ + G+L A +F I+ P ++++N +I
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDM--YAKVGDLADAISVFEKIKQPDIVSWNAVIAGCV 335
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
++L L +++ G+ P+ FT KA +G + G ++H ++K +E D +
Sbjct: 336 LHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLF 395
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQG 183
V ++DMY + + + F+ +P+KD+++WN ISG+ + +A+ +F M ++G
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
++ T+ + L + L+ + + +++H + K G S+
Sbjct: 456 IGF--NQTTLSTILKSTAGLQVVHVCRQVH------------------GLSVKSGFHSD- 494
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+ S++ Y C +E A +F+ + D+V +T+MI Y Q+ + +
Sbjct: 495 -----------IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGE 543
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ LF EMQ + LKPD+F+ +LL CA L A EQGK +H +I + +D +L+
Sbjct: 544 EALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV 603
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKCG I+ A F EL E+ SW+++I GLA +G +AL+LF+QM+ G P+ I
Sbjct: 604 NMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHI 663
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T + VL AC+H GLV E + +F +M E++ +P EHY C+IDLLGRAG ++EA EL+ K
Sbjct: 664 TLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNK 723
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P E N ++GALL A RI+ +V++G + A +L +E + S H LLANIYASA +W
Sbjct: 724 MPFEAN---ASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKW 780
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
E+V VR+ M++ V+K PG S IE+ ++ FLVGD SH +EIY+ LD ++
Sbjct: 781 ENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 834
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 256/525 (48%), Gaps = 40/525 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI A I + GL +P N L+ + N YA K+ P L++++ LI +A+
Sbjct: 77 QIHAHITKSGLSDDPSIRNHLINLYSKCR--NFGYARKLVDESSEPDLVSWSALISGYAQ 134
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G +L+ F ++ GV + FT+ V KA + +++ G++VHG VV +G E D +V
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N+++ MY + + K+LFDE+P+++VVSWN S +V+ +AV +F M
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLS-G 253
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEAR 244
+ P+E ++ S ++ACT L++ GK IH Y I ++ P NAL+DMY K G L++A
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+F+++ +++ W A+I G V ++
Sbjct: 314 SVFEKIKQPDIVSW-------------------------------NAVIAGCVLHEHHEQ 342
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A+ L +M+ + P+ F L + L CA +G E G+ +H + + + D V+ L++
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVD 402
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY+KC L+E A F L EKD +W +II G + + +AL LF +M G + T
Sbjct: 403 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 462
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
+L + + +V R+ + ++ + LID G+ +++AE + +
Sbjct: 463 LSTILKSTAGLQVVHVCRQ-VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 521
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
+ + + ++++A YG + KL ++ +E K F
Sbjct: 522 TIGD----LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRF 562
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 197/408 (48%), Gaps = 40/408 (9%)
Query: 85 SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK 144
+P + +Y + ++ G ++H ++ K+GL D + N ++++Y +K
Sbjct: 53 TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR---QGCNLMPDEGTVVSTLSACT 201
L DE + D+VSW+ ISG+ + A+ F M CN E T S L AC+
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN----EFTFSSVLKACS 168
Query: 202 ALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
+K+L +GK++H + E + N L+ MY KC E D
Sbjct: 169 IVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD------EFLD------------ 210
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
++ LFD P R++V W A+ + YVQ + EAV LF EM + +KP+
Sbjct: 211 -------------SKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPN 257
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+F L +++ C L +GK IHGY+ + D A AL++MYAK G + A+ +F
Sbjct: 258 EFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFE 317
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
++++ D SW ++I G ++ +ALEL QM G P+ T L AC+ GL +
Sbjct: 318 KIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKEL 377
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
GR+ +++ ++ ++ L L+D+ + LL++A +P ++
Sbjct: 378 GRQLHSSLMKM-DMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKD 424
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 172/398 (43%), Gaps = 73/398 (18%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEA 243
N P + LS C K+L G +IH +I + L P + N L+++Y KC
Sbjct: 51 NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC------ 104
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+N GY AR L D S D+V W+A+I+GY Q
Sbjct: 105 ---------RNF--------GY--------ARKLVDESSEPDLVSWSALISGYAQNGLGG 139
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ F EM ++ +K ++F ++L C+ + L GK +HG + + D VA L+
Sbjct: 140 GALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLV 199
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKC + +F E+ E++ SW ++ +A+ LF +M+ G KP++
Sbjct: 200 VMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEF 259
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE----HYGCLIDLLGRAGLLDEAEE 479
+ +++AC+ GL D R + Y I+ + L+D+ + G L +A
Sbjct: 260 SLSSMVNACT--GLRDSSR---GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314
Query: 480 LIRKIP----------------NENNEIIVPLYGAL---------------LSACRIYGN 508
+ KI +E++E + L G + L AC G
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGL 374
Query: 509 VDMGEKLAALLEKIESKDSSFHTL-LANIYASANRWED 545
++G +L + L K++ + F ++ L ++Y+ + ED
Sbjct: 375 KELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLED 412
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+I QF++ + A+ + P LL+ C +L G IH +I ++
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
++ D + LI +Y+KC A ++ E E D SW+++I G A NG AL F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 412 QMISGGAKPDDITFIGVLSACS 433
+M G K ++ TF VL ACS
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACS 168
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/561 (34%), Positives = 328/561 (58%), Gaps = 39/561 (6%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
+ F ++ L + N L+ F + + + +L G P+ +T+ + K G
Sbjct: 146 QFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKG 205
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++ +G+ +HG V+K+G+ D+++ NS++++Y G K+F E+P++DVVSW I+
Sbjct: 206 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 265
Query: 163 GHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQEL 220
G V + + +F +M +G N P+ T +S L +C++L +++LGK++H + + L
Sbjct: 266 GFVA-EGYGSGLRIFNQMLAEGFN--PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSL 322
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ +G AL+DMY A+ F LE A +F+R
Sbjct: 323 DGNDFVGTALVDMY--------AKNRF-----------------------LEDAETIFNR 351
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
RD+ WT ++ GY Q + ++AV F +MQ +KP++F L + L+GC+++ L+ G
Sbjct: 352 LIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 411
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+ +H + + D VA+AL++MYAKCG +E A +F L +D SW +IICG + +
Sbjct: 412 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 471
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ KAL+ F M+ G PD++TFIGVLSACSH GL++EG++ FN+++++Y I P +EH
Sbjct: 472 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 531
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C++D+LGRAG E E I ++ +N V ++ +L AC+++GN++ GE+ A L
Sbjct: 532 YACMVDILGRAGKFHEVESFIEEMKLTSN---VLIWETVLGACKMHGNIEFGERAAMKLF 588
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++E + S + LL+N++A+ W+DVTNVR M GV+K PGCS +E+NG +H FL D
Sbjct: 589 ELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHD 648
Query: 581 PSHSEMKEIYSMLDRMAKTLL 601
SH +++EI+ L + + L+
Sbjct: 649 GSHPKIREIHLKLQDLHQKLM 669
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 233/521 (44%), Gaps = 70/521 (13%)
Query: 69 FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
++++ LF +R + + F + + A LG+ GE +H V K G E D + N+
Sbjct: 71 LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF-RRMRQGCNLM 187
+ MY + N + F M +++ S N +SG + + + + +G
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEG--FE 188
Query: 188 PDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEAREL 246
P+ T +S L C + +L GK IH + I + + N+L+++Y KCG + A ++
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
F E+P ++V+ WT++++G+V G + +
Sbjct: 249 FGEIPERDVVSWTALITGFVAEG--------------------------------YGSGL 276
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
+F +M P+ + +++L C+ L ++ GK +H I +N + + V TAL++MY
Sbjct: 277 RIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMY 336
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AK +E A IF L ++D +WT I+ G A +G+ KA++ F QM G KP++ T
Sbjct: 337 AKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLA 396
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
LS CS +D GR+ + + Q + L+D+ + G +++AE + + +
Sbjct: 397 SSLSGCSRIATLDSGRQLHSMAIKAGQ-SGDMFVASALVDMYAKCGCVEDAEVVFDGLVS 455
Query: 487 EN----NEII------------------------VP---LYGALLSACRIYGNVDMGEKL 515
+ N II VP + +LSAC G ++ G+K
Sbjct: 456 RDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKH 515
Query: 516 AALLEKIESKDSSF--HTLLANIYASANRWEDVTNVRQKMK 554
L KI + + + +I A ++ +V + ++MK
Sbjct: 516 FNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 556
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 181/376 (48%), Gaps = 43/376 (11%)
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
V+K G+ D+++ +S++++Y + +++ +EMP +DV WN +S ++A
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLD 232
V +F MR + ++ S +SA +L + G+ IH + + E ++ NA +
Sbjct: 75 VQLFYLMRH-TRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY K + + F M +N+ +++SG+ + + D+ P +L +
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCD-------TETCDQGPR---ILIQLL 183
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
+ G+ +P+ + +++L CA G L +GK IHG + ++ I
Sbjct: 184 VEGF---------------------EPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGI 222
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
D+ + +L+ +YAKCG A ++F E+ E+D SWT++I G G L +F+Q
Sbjct: 223 NPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQ 281
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG----CLIDLL 468
M++ G P+ TFI +L +CS VD G++ + ++ L+ L+D+
Sbjct: 282 MLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQI-----VKNSLDGNDFVGTALVDMY 336
Query: 469 GRAGLLDEAEELIRKI 484
+ L++AE + ++
Sbjct: 337 AKNRFLEDAETIFNRL 352
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 150/337 (44%), Gaps = 37/337 (10%)
Query: 253 KNVIC-----WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
KN IC W+S+V+ YV C L+ AR + + P++D+ W ++ EAV
Sbjct: 17 KNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQ 76
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
LF M+ R++ ++FI +L++ A LG G+ IH + + D +++ A + MY
Sbjct: 77 LFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYM 136
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
K +E + F + ++ AS +++ G ++ + Q++ G +P+ TFI
Sbjct: 137 KTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFIS 196
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
+L C+ G ++EG+ + + I P + L+++ + G + A ++ +IP
Sbjct: 197 ILKTCASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER 255
Query: 488 N--------NEIIVPLYG----------------------ALLSACRIYGNVDMGEKLAA 517
+ + YG ++L +C +VD+G+++ A
Sbjct: 256 DVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHA 315
Query: 518 LLEKIESKDSSF-HTLLANIYASANRWEDVTNVRQKM 553
+ K + F T L ++YA ED + ++
Sbjct: 316 QIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 352
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ AQI + L N L+ + + L AE IF + L A+ +++ +A
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDM--YAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYA 368
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G K++ F +++ GV P+ FT + + G ++H +K G D +
Sbjct: 369 QDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMF 428
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V ++++DMY G + + + +FD + +D VSWN I G+ + + A+ F M
Sbjct: 429 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDE- 487
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
+PDE T + LSAC+ + +E GK+ +++ TP + + ++D+ + G E
Sbjct: 488 GTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHE 547
Query: 243 ARELFDEMP-NKNVICWTSMVSGYVNCGQLE----KARDLFDRSPVRD 285
+EM NV+ W +++ G +E A LF+ P D
Sbjct: 548 VESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEID 595
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 307/527 (58%), Gaps = 40/527 (7%)
Query: 80 RERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
R G V+ DN++ F A L V G ++H VK GL DT+V NS+++MY
Sbjct: 84 RHSGYVTLDNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSY 143
Query: 139 ICNVKKLFDEMPDK--DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVST 196
+++ D P D VSWN ISG+++ A+ F +M + + D+ T+++
Sbjct: 144 PATARQVLDSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKE-QVTLDDVTLLNA 202
Query: 197 LSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L A +++G+ H + MG++L+ MY KCG + +AR++F M +NV
Sbjct: 203 LVASAKAGKVKVGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNV 262
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
+CWTSM+SGY Q +F EAV LFR+MQI
Sbjct: 263 VCWTSMISGY-------------------------------TQLGKFKEAVNLFRDMQIT 291
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
+K D + +++ CAQ+GAL+ G+++H Y + + + + V +LI+MY+KCG I KA
Sbjct: 292 GMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYSKCGDINKA 351
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSH 434
EIF L ++D SWT++I G +NG ++AL+LF+QM G P+++TF+GVL++CSH
Sbjct: 352 HEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTSCSH 411
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP 494
GGLV++G +F M+ VY++ P++EHYGC++DLLGRA LL EAE+ I+ +P + ++
Sbjct: 412 GGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPDVVV-- 469
Query: 495 LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMK 554
+ +LL ACR G V + E +A + ++E K + H LL+N+YA+ +RW DV +R M
Sbjct: 470 -WRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVYATTSRWVDVNELRTSMD 528
Query: 555 EMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
+ K PGCS IE++G +HEF GD SH E + IY++L +++ L+
Sbjct: 529 NSRMSKQPGCSFIEVDGCVHEFFAGDESHLETEAIYNILLGISELLV 575
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 195/405 (48%), Gaps = 38/405 (9%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSI-QSPC-LLAYNLLI 60
Q+ + ++GL + LN L+ C++P+ A ++ S Q C +++N +I
Sbjct: 114 QLHSLSVKLGLVSDTFVLNSLINMYSSCSYPA-----TARQVLDSAPQGACDTVSWNTII 168
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + G K+L F ++ + V+ D+ T A G+VK G H VV G
Sbjct: 169 SGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAG 228
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ Y+ +S++ MY G + + +K+F M +++VV W ISG+ + +F++AV++FR M
Sbjct: 229 INCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDM 288
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-----INQELEFTPIMGNALLDMYC 235
Q + D+GT+ + +S+C + L+LG+ +H Y + +EL + N+L+DMY
Sbjct: 289 -QITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELS----VKNSLIDMYS 343
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR-----SPVRDIVLWT 290
KCG +++A E+F + ++V WT+M+ G+ G +A DLF + + + V +
Sbjct: 344 KCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFL 403
Query: 291 AMINGYVQFNRFDEAVALFREMQII-RLKP---DKFILVALLTGCAQLGALEQGKWIHGY 346
++ ++ F+ M ++ +L P +V LL L EQ +
Sbjct: 404 GVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQ------F 457
Query: 347 INENRITVDAVVATALIEMYAKC---GLIEKALEIFYELREKDAA 388
I I D VV +L+ C GL E E EL K A
Sbjct: 458 IKNMPIAPDVVVWRSLLFACRACGEVGLAEFVAERILELEPKKCA 502
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 321/596 (53%), Gaps = 74/596 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+T+ K+I + + L+KL + S ++ A ++F I +P ++ +N +I
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRL--YLSCNQVVLARRLFDEIPNPSVILWNQII 81
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+A G F ++ L+ + GV P+ +TYPFV KA L ++ G ++H + GLE
Sbjct: 82 RAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE 141
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +VC +++D Y G + ++LF M +DVV+WN I+G +DAV + +M
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQM 201
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
++ + P+ T+V L C CL
Sbjct: 202 QEE-GICPNSSTIVGVLPTCQ-------------------------------------CL 223
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
AR++FD M +N + W++M+ GYV +++A D
Sbjct: 224 LYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALD------------------------ 259
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+FR MQ+ + PD ++ +L C+ L AL+ G HGY+ D ++
Sbjct: 260 -------IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 312
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MY+KCG I A E+F + D SW ++I G ++G +AL LF +++ G KP
Sbjct: 313 ALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKP 372
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDITFI +LS+CSH GLV EGR +F+ M+ + I P++EH C++D+LGRAGL+DEA
Sbjct: 373 DDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF 432
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
IR +P E + V ++ ALLSACRI+ N+++GE+++ ++ + + + LL+NIY++A
Sbjct: 433 IRNMPFEPD---VRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAA 489
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
RW+D ++R K+ G++K+PGCS IEINGI+H F+ GD SH ++ +I L+ +
Sbjct: 490 GRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 545
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LL C Q +L + K IH + +N D+ V L +Y C + A +F E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
W II A NG + A++L+ M+ G +P+ T+ VL ACS G L E +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDGVEIH 132
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+ +++ ++ + L+D + G+L EA+ L + + + V + A+++ C +Y
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD----VVAWNAMIAGCSLY 188
Query: 507 GNVDMGEKL 515
G D +L
Sbjct: 189 GLCDDAVQL 197
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 300/523 (57%), Gaps = 23/523 (4%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+KK +++H ++ G ++ ++ Y G + N K+F+ + + WN I G
Sbjct: 47 IKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRG 106
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
H + V+++ RM + P+E T + C L G+++H R +
Sbjct: 107 HSQSETPHKLVELYNRMVEA-EAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYCT 165
Query: 223 TPIMGNALLDMYCKCGC---LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ +L+++Y G + +AR +FDE+ ++N++ W S+++GYV CG ++ AR +FD
Sbjct: 166 NVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFD 225
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P R++V WT MI G Q R +A+ LF EM+ +K D+ LVA L+ CA+LG L+
Sbjct: 226 EMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKL 285
Query: 340 GKWIHGYINENRITVD----AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
G WIH YI+E + + +LI MYA CG+I+KA ++F ++++ SWTS+I
Sbjct: 286 GTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMIT 345
Query: 396 GLAMNGKINKALELFSQMISGG---AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
G A G +AL +F M G +PD ITFIGVL ACSH G VD+GR FF M + +
Sbjct: 346 GFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKW 405
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
I P++EHYGC++DLL RAG LDEA L +P + N+ + +GALL CRI+ N ++
Sbjct: 406 GIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAV---WGALLGGCRIHKNAELA 462
Query: 513 EKLAA--LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+A +LE + + + LL+N+YA+A RW+DV VRQKM E+GVRK G S ++IN
Sbjct: 463 SHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQIN 522
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDNL 613
G++H+F+ GD +H +Y ML ++ ++Q +EG L
Sbjct: 523 GVVHDFVAGDWTHKHASSVYEMLSKI------TRQAKLEGYKL 559
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 215/454 (47%), Gaps = 76/454 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LKQI QI G Q L KL+ F + + GNLL A K+F I++P +N +I
Sbjct: 47 IKKLKQIHTQIIVNGFSQKNFLLVKLLSF--YITSGNLLNAHKVFERIENPSTTVWNQMI 104
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ + K + L++++ E P+ FTY F+ +++GE+VHG VV G
Sbjct: 105 RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYC 164
Query: 121 FDTYVCNSIMDMYGVLGKICNVKK----------------------------------LF 146
+ +V S++++Y + G V+K +F
Sbjct: 165 TNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIF 224
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
DEMP+++VVSW I+G + R + A+ +F MR+ + D+ +V+ LSAC L +L
Sbjct: 225 DEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRA-GVKLDQVALVAALSACAELGDL 283
Query: 207 ELGKEIHRYINQELEF--TPI---MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+LG IH YI++ L P+ + N+L+ MY CG + +A ++F M ++ I WTSM
Sbjct: 284 KLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSM 343
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
++G+ G E+A +F ++Q DE +PD
Sbjct: 344 ITGFAKQGHAEEALGVFQ----------------WMQRLGTDEG------------RPDG 375
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFY 380
+ +L C+ G ++QG+ +N+ V + ++++ ++ G +++A +
Sbjct: 376 ITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXE 435
Query: 381 ELREK-DAASWTSIICGLAMNGKINKALELFSQM 413
+ K + A W +++ G +I+K EL S +
Sbjct: 436 SMPMKPNDAVWGALLGGC----RIHKNAELASHV 465
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 203/597 (34%), Positives = 330/597 (55%), Gaps = 38/597 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ ++ + GL N N L+ + G++ A ++F ++ S +++ L A+A
Sbjct: 165 REVHVRVMEAGLANNATVGNALISM--YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 222
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G ++SL + + + GV P TY V A G L ++KG+++H +V++ D
Sbjct: 223 ESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVR 282
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V ++ MY G + + +++F+ +P++DV++WN I G V + E+A +F RM + C
Sbjct: 283 VSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKEC 342
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD T ++ LSAC L GKEIH R + L GNAL++MY K G + +A
Sbjct: 343 -VAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDA 401
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R +FDR P RD+V WTA++ GY +
Sbjct: 402 -------------------------------RQVFDRMPKRDVVSWTALVGGYADCGQVV 430
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
E+ + F++M ++ +K + +L C+ AL+ GK IH + + I D VA AL+
Sbjct: 431 ESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALM 490
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MY KCG +E A+ + + +D +W ++I GLA NG+ +AL+ F M S +P+
Sbjct: 491 SMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNAT 550
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF+ V+SAC LV+EGRR F +M + Y I P +HY C++D+L RAG L EAE++I
Sbjct: 551 TFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILT 610
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + + ++GALL+ACR +GNV++GE+ A K+E +++ + L+ IYA+A W
Sbjct: 611 MPFKPS---AAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMW 667
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
DV +R+ MKE GV+K PG S IE+ G +H F+ GD SH +EIYS L+ + K +
Sbjct: 668 RDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQI 724
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 217/411 (52%), Gaps = 34/411 (8%)
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
L ++G D++ Y + ++ ++ G++VH ++++ G++ + Y+ N+++ +Y G
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ ++LFD+ +K VVSWNV ISG+ ++A ++F M+Q L PD+ T VS LS
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQE-GLEPDKFTFVSILS 153
Query: 199 ACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC++ L G+E+H R + L +GNAL+ MY KCG + +AR +FD M +++ +
Sbjct: 154 ACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVS 213
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
WT++ Y +GY Q E++ + M +
Sbjct: 214 WTTLTGAYAE--------------------------SGYAQ-----ESLKTYHAMLQEGV 242
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+P + + +L+ C L ALE+GK IH I E+ D V+TAL +MY KCG ++ A E
Sbjct: 243 RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDARE 302
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F L +D +W ++I GL +G++ +A +F +M+ PD +T++ +LSAC+ G
Sbjct: 303 VFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGG 362
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ G+ + + + LI++ +AG + +A ++ ++P +
Sbjct: 363 LACGKEIHARAVKDGLVS-DVRFGNALINMYSKAGSMKDARQVFDRMPKRD 412
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 187/416 (44%), Gaps = 62/416 (14%)
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDM 233
DV + + Q + + D V L +C K+L +GK++H +I +
Sbjct: 29 ADVLQYLHQKGSQV-DSYDYVKLLQSCVKAKDLAVGKQVHEHILR--------------- 72
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
F PN +I +++ YV+CG + +AR LFD+ + +V W MI
Sbjct: 73 -------------FGMKPNVYII--NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMI 117
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+GY EA LF MQ L+PDKF V++L+ C+ AL G+ +H + E +
Sbjct: 118 SGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLA 177
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+A V ALI MYAKCG + A +F + +D SWT++ A +G ++L+ + M
Sbjct: 178 NNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAM 237
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGR---------------RFFNTMTEVY----QI 454
+ G +P IT++ VLSAC +++G+ R +T++Y +
Sbjct: 238 LQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAV 297
Query: 455 QPKLEHYGCL-----------IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+ E + CL I L +G L+EA + ++ E Y A+LSAC
Sbjct: 298 KDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSAC 357
Query: 504 RIYGNVDMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
G + G+++ A K D F L N+Y+ A +D V +M + V
Sbjct: 358 ARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDV 413
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 209/615 (33%), Positives = 325/615 (52%), Gaps = 40/615 (6%)
Query: 17 QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLF 76
Q+N T N L+ + G L A +F + +++ +++ + G F +++ +F
Sbjct: 93 QRNVFTWNSLLSL--YAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMF 150
Query: 77 SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL 136
+ G+SP FT V + G KVH +VVK GL V NS+++MYG
Sbjct: 151 LDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKC 210
Query: 137 GKICNVKKLFDEMPDKDVVSWN--VSISGHVKCMR-----FEDAVD-------------- 175
G + +F+ MP++ V SWN VS+ H+ M FE+ D
Sbjct: 211 GDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYN 270
Query: 176 ----------VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
F RM + PDE T+ S LSAC L + +GK++H YI + +
Sbjct: 271 QNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIG 330
Query: 225 IMGNALLDMYCKCGCLSEARELFDE--MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ MY K G + AR + + M + NVI +T+++ GYV G ++ AR++FD
Sbjct: 331 QVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMS 390
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RD+V WTAMI GY Q DEA+ LFR M +P+ + + A+L+ CA L LE GK
Sbjct: 391 NRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQ 450
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNG 401
IH + + V+ +++ MYA+ G + A +F + K+ +WTS+I LA +G
Sbjct: 451 IHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG 510
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A+ LF +M+ G KPD ITF+GVLSAC+H G VDEG+R+F + + + I P++ HY
Sbjct: 511 LGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHY 570
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++DLL RAGL EA+E I+++P E + I +G+LLSACR++ N D+ E A L
Sbjct: 571 ACMVDLLARAGLFSEAQEFIQQMPVEPDAIA---WGSLLSACRVHKNADLAELAAEKLLS 627
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
I+ +S ++ L+N+Y++ RW D + ++ K+ V+K G S I +H F D
Sbjct: 628 IDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDV 687
Query: 582 SHSEMKEIYSMLDRM 596
H + +Y +M
Sbjct: 688 LHPQRDTVYRTAAKM 702
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 221/489 (45%), Gaps = 81/489 (16%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNS-------------------------------------- 128
G +H VK GL Y+CN+
Sbjct: 42 GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
++ +Y G++ + + +F EMP++D VSW V + G + RF +A+ +F M L P
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTD-GLSP 160
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELF 247
+ T+ + LS+C A + +G+++H ++ + L + N++L+MY KCG AR +F
Sbjct: 161 TQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVF 220
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
+ MP ++V W +MVS + G+++ A LF+ P R IV W A+I GY Q +A+
Sbjct: 221 ERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALW 280
Query: 308 LF-REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
F R + + PD+F + ++L+ CA LG + GK +H YI +R+ V ALI MY
Sbjct: 281 FFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMY 340
Query: 367 AKCGLIEK---------------------------------ALEIFYELREKDAASWTSI 393
AK G +E A E+F + +D +WT++
Sbjct: 341 AKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAM 400
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I G NG ++A+ELF MI G +P+ T VLS C+ ++ G++ Q
Sbjct: 401 IVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQ 460
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
Q ++ + R+G L A + ++ + + +++ A +G +GE
Sbjct: 461 EQSS-SVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT---WTSMIVALAQHG---LGE 513
Query: 514 KLAALLEKI 522
L E++
Sbjct: 514 DAVGLFEEM 522
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 49/347 (14%)
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGC 239
R D L C N G+ IH R + L + + N LL Y
Sbjct: 14 RTAMAAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAA 73
Query: 240 -----LSEARELFDEMP--NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
EAR LFDE+P +NV W S++S Y G+L AR +F P RD V WT M
Sbjct: 74 GGGGGFREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVM 133
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
+ G + RF EA+ +F +M L P +F L +L+ CA A G+ +H ++ + +
Sbjct: 134 VVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGL 193
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA------------------------ 388
+ VA +++ MY KCG E A +F + E+ +
Sbjct: 194 SSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFEN 253
Query: 389 -------SWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDE 440
SW ++I G NG KAL FS+M+S PD+ T VLSAC++ G+V
Sbjct: 254 MPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSI 313
Query: 441 GRRFFNTMTEVYQIQPKLEHYG----CLIDLLGRAGLLDEAEELIRK 483
G++ Y ++ ++ + G LI + ++G ++ A ++++
Sbjct: 314 GKQ-----VHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQ 355
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 185/512 (36%), Positives = 311/512 (60%), Gaps = 21/512 (4%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+ +H +V+K L +++ ++D+ + LF ++ + + +N I H
Sbjct: 31 KSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYLYNAMIRAHTHN 90
Query: 168 MRFEDAVDVFRRMRQGCN------LMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
+ A+ ++ M + + + PD T + +C+ L LGK++H ++ +
Sbjct: 91 KVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHL---CK 147
Query: 222 FTP----IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
F P M NAL+DMY KC L +A ++FD M ++ I W S++SG+V GQ+ KA L
Sbjct: 148 FGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRKAGAL 207
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FD P R IV WTAMI+GY + + +A+ +FR+MQI+ ++PD+ ++++L CAQLGAL
Sbjct: 208 FDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGAL 267
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
E GKWIH Y + N + + AL+EMY+KCG I +A ++F ++ + D SW+++I GL
Sbjct: 268 EVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGL 327
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
A +GK +A+ELF +M +P+ ITF+G+LSAC+H G +EG +F++M++ Y I+P+
Sbjct: 328 ANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPE 387
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
+EHYGCL+D+LGRAG L +A ++I K+P + + I +G+LLS+CR + N+D+
Sbjct: 388 VEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKI---WGSLLSSCRTHSNLDIAIIAME 444
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
LE++E D+ + LL+NIYA +W+ V+ +R+ +K ++K PG S I+IN ++ EF+
Sbjct: 445 HLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQEFV 504
Query: 578 VGDPSHSEMKEIYSMLDRMAKTLLDSKQNAME 609
D S ++I+ +L+ LL S Q+ +
Sbjct: 505 SWDDSKPFSRDIFWLLE-----LLTSHQDTTD 531
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 212/449 (47%), Gaps = 77/449 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LK I A + + L Q+ + K++ C +L YA +F ++ P YN +I
Sbjct: 27 IVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTE--DLGYASLLFKQVKEPNGYLYNAMI 84
Query: 61 KAFAKKGSFRKSLLLFSKL-------RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+A + ++L + ++ E + PD FT+PFV K+ L G++VH +
Sbjct: 85 RAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAH 144
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR-- 169
+ K G + + + N+++DMY + + K+FD M ++D +SWN ISGHV MR
Sbjct: 145 LCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRKA 204
Query: 170 ---------------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
+ DA+ VFR+M Q + PDE +++S L AC
Sbjct: 205 GALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQM-QIVGVEPDEISIISVLPACAQ 263
Query: 203 LKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
L LE+GK IH Y ++ L T I NAL++MY KCGC+ +A +LFD+M +VI W++
Sbjct: 264 LGALEVGKWIHMYCDRNGLLRKTSIC-NALMEMYSKCGCIGQAYQLFDQMSKGDVISWST 322
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
M+ G N G KAR EA+ LF+ M+ +++P+
Sbjct: 323 MIGGLANHG---KAR----------------------------EAIELFKRMKKAKIEPN 351
Query: 321 KFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+ LL+ CA G +G + + I + L+++ + G + +AL++
Sbjct: 352 GITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVI 411
Query: 380 YELREK-DAASWTSIICGLAMNGKINKAL 407
++ K D+ W S++ + ++ A+
Sbjct: 412 EKMPMKPDSKIWGSLLSSCRTHSNLDIAI 440
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 204/537 (37%), Positives = 321/537 (59%), Gaps = 17/537 (3%)
Query: 46 GSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVK 105
G+++ P L +N +IK+ + RK+LLLF + + GVS D F+ V KA LG VK
Sbjct: 83 GNVEDPFL--WNAVIKSHSHGVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVK 140
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+G + HG++ KTG+ D ++ N ++ +Y G + +++FD M +D VS+N I G+V
Sbjct: 141 EGMQXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYV 200
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQEL-EFT 223
KC E A ++F +LMP E ++S S G +I + E+ E
Sbjct: 201 KCGLIESARELF-------DLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMPEKD 253
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
I N+L+D Y K G + +A++LFD+MP ++V+ W +MV GY G + +A+ LFD+ P
Sbjct: 254 LISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQ 313
Query: 284 RDIVLWTAMINGYVQFNRFD-EAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGK 341
RD+V + +M+ GYVQ NR+ EA+ +F +M+ L PD+ LV +L+ AQLG L +
Sbjct: 314 RDVVAYNSMMAGYVQ-NRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 372
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H Y E + + + ALI+MY+KCG I++A+ +F + K W ++I GLA++G
Sbjct: 373 DMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHG 432
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A ++ Q+ KPDDITF+GVL+ACSH GLV EG F M ++I+P+L+HY
Sbjct: 433 LGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHY 492
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++D+L R+G ++ A+ LI ++P E N++I + L+AC + + GE +A L
Sbjct: 493 GCMVDILSRSGRIELAKNLIEEMPIEPNDVI---WRTFLTACSHHKEFETGELVAKHLIL 549
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ S + LL+N+YAS W++V VR MKE ++K+PGCS IE++G +HEF V
Sbjct: 550 QAGYNPSSYVLLSNMYASLGMWKEVRRVRTMMKERKIQKIPGCSWIELDGSVHEFFV 606
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 51/255 (20%)
Query: 345 GYINENRITVDAVVATA-----LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G+I +T V+A A + +A+C E + +D W ++I +
Sbjct: 41 GFIKNTNLTTRIVLAFAASRRSYLAEFARCVFHEYHVSSXXSGNVEDPFLWNAVIKSHSH 100
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG------------------ 441
+ KAL LF M+ G D + VL ACS G V EG
Sbjct: 101 GVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVKEGMQXHGFLRKTGIWSDLFL 160
Query: 442 -----------------RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
R+ F+ M++ + Y +ID + GL++ A EL +
Sbjct: 161 QNCLIGLYLKCGCLGFARQVFDRMSQRDSVS-----YNSMIDGYVKCGLIESARELFDLM 215
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAA-LLEKIESKDSSFHTLLANIYASANRW 543
P+E +I + ++++ Y G +A+ L +++ KD L + Y R
Sbjct: 216 PSEKKNLIS--WNSMING---YAQRADGVDIASNLFDEMPEKDLISWNSLIDGYVKHGRI 270
Query: 544 EDVTNVRQKMKEMGV 558
ED ++ KM V
Sbjct: 271 EDAKDLFDKMPRRDV 285
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 85/227 (37%), Gaps = 48/227 (21%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F I++ + +N +I A G + + ++ R + PD+ T+ V
Sbjct: 401 GSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVL 460
Query: 96 KAVGWLGEVKKG-------EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
A G VK+G ++ H K Y C ++D+ G+I K L +E
Sbjct: 461 NACSHSGLVKEGLLCFELMKRKH----KIEPRLQHYGC--MVDILSRSGRIELAKNLIEE 514
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP + P++ + L+AC+ K E
Sbjct: 515 MP-----------------------------------IEPNDVIWRTFLTACSHHKEFET 539
Query: 209 GKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
G+ + +++ + + P L +MY G E R + M + +
Sbjct: 540 GELVAKHLILQAGYNPSSYVLLSNMYASLGMWKEVRRVRTMMKERKI 586
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/516 (36%), Positives = 300/516 (58%), Gaps = 19/516 (3%)
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD 147
NF PF + +VH ++KT + + +++F+
Sbjct: 37 NFNSPFELR------------QVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFE 84
Query: 148 --EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
E + WN + + DA+ +F R+RQ ++ PD T S L AC L +
Sbjct: 85 CVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQ-YDVCPDTFTCSSVLRACLNLLD 143
Query: 206 LELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
L G+ +H + + + N ++ +Y CG + EAR LF++MP ++V+ W M++
Sbjct: 144 LSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQ 203
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
+ G E A DLF R P R++ WT+MI GYVQ + EA+ LF +M+ +K ++ +
Sbjct: 204 LIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTV 263
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
VA+L CA LGAL+ G IH Y N + + ++ LI+MY KCG +E+A ++F E+ E
Sbjct: 264 VAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEE 323
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
+ SW+++I GLAM+G+ +AL LFS M G +P+ +TFIG+L ACSH GL+ EGRRF
Sbjct: 324 RTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRF 383
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
F +MT Y I P++EHYGC++DLL RAGLL EA E I +P + N ++ +GALL ACR
Sbjct: 384 FASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVV---WGALLGACR 440
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGC 564
++ NV+M E+ L +++ + ++ +L+NIYA A RWED VR+ MK+ V+K PG
Sbjct: 441 VHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGW 500
Query: 565 SSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
SSI ++G++HEF+ G+ SH + ++I+ + + + +
Sbjct: 501 SSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEM 536
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 210/451 (46%), Gaps = 76/451 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYNLLI 60
+L+Q+ AQI + + L ++ + C + YA++IF + Q P +N +
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTP--SFHYAQQIFECVEKQKPETFVWNSCL 100
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KA A+ S +++LF +LR+ V PD FT V +A L ++ G +HG V K G
Sbjct: 101 KALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR 160
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV--------------------- 159
+ Y+ N I+ +Y G++ + LF++MP +DVV+WN+
Sbjct: 161 SNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRM 220
Query: 160 ----------SISGHVKCMRFEDAVDVFRRMRQG---CNLMPDEGTVVSTLSACTALKNL 206
I+G+V+C + ++A+ +F +M + CN E TVV+ L+AC L L
Sbjct: 221 PERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCN----EVTVVAVLAACADLGAL 276
Query: 207 ELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
+LG IH Y N+ + + N L+DMY KCGCL EA ++F+EM + V+ W++M+ G
Sbjct: 277 DLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGL 336
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G R +EA+ LF +M + ++P+ +
Sbjct: 337 AMHG-------------------------------RAEEALRLFSDMSQVGIEPNGVTFI 365
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELRE 384
LL C+ +G + +G+ + + + + ++++ ++ GL+ +A E +
Sbjct: 366 GLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPM 425
Query: 385 K-DAASWTSIICGLAMNGKINKALELFSQMI 414
K + W +++ ++ + A E ++
Sbjct: 426 KPNGVVWGALLGACRVHKNVEMAEEAIKHLL 456
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/500 (38%), Positives = 290/500 (58%), Gaps = 18/500 (3%)
Query: 106 KGEKVHGYVVKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
+H ++K GL ++ +++ Y LG + ++LFDEMP++ +V H
Sbjct: 28 SASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAH 87
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC------TALKNLELGKEIHRYI-N 217
V + A+ VF M + PD + L AC TA +N GK+IH I
Sbjct: 88 VASGQAAQAIAVFGDMVAD-GVFPDNVALAVALGACHGAGSWTARRNP--GKKIHALIVT 144
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+E + L+ +Y +CG L+ +R +FD+MP+++ I W +M+ Y G+++ A +L
Sbjct: 145 SGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEL 204
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM---QIIRLKPDKFILVALLTGCAQL 334
F P RD+V W ++ GY R EA+ LFR+M + P+ + +L CA
Sbjct: 205 FLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGA 264
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSI 393
G LE G W+H YI NR+ D + LI+MY KCG I+ AL++F + R++D SWT++
Sbjct: 265 GCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTTV 324
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
ICGLAM+G+ AL +F M G PDD+T +GVL+AC+HGGLVDEG +F +M ++
Sbjct: 325 ICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFR 384
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I PK+EHYGC+IDLLGR G L EA +IR +P + N +I +GA LSAC+++GN+++G+
Sbjct: 385 ITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVI---WGAFLSACKVHGNMELGK 441
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
A L +++ D +L+++YA A W + R++M M V+K PGCSSIE+ G +
Sbjct: 442 IAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEV 501
Query: 574 HEFLVGDPSHSEMKEIYSML 593
HEF+ G H + EI S+L
Sbjct: 502 HEFVAGGSQHPQYAEICSVL 521
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 173/408 (42%), Gaps = 70/408 (17%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ +A ++F + L+ + +A G +++ +F + GV PDN
Sbjct: 60 GSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVALAVAL 119
Query: 96 KAV----GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A W G+K+H +V +G+E D +V ++ +YG GK+ +++FD+MP
Sbjct: 120 GACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPS 179
Query: 152 K-------------------------------DVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ DVVSWN ++G+ R +A+ +FR+M
Sbjct: 180 RSTITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQM 239
Query: 181 --RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC 237
C + P+ T+ + L AC LE G +H YI + + + L+DMYCKC
Sbjct: 240 VSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKC 299
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G + A ++F++ P K RDLF WT +I G
Sbjct: 300 GSIDNALQVFEKAPRK---------------------RDLFS---------WTTVICGLA 329
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDA 356
R +A+ +F MQ + PD LV +L CA G +++G + + + RIT
Sbjct: 330 MHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKI 389
Query: 357 VVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
+I++ + G +++A + + + + W + + ++G +
Sbjct: 390 EHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNM 437
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER---GVSPDNFTY 91
HG + A ++F ++ ++++N ++ + G R++L LF ++ V P+ T
Sbjct: 195 HGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTM 254
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ A G ++ G VH Y+ + + D Y+ ++DMY G I N ++F++ P
Sbjct: 255 STILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPR 314
Query: 152 K-DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
K D+ SW I G R DA+ +F M Q + PD+ T+V L+AC ++ G
Sbjct: 315 KRDLFSWTTVICGLAMHGRATDALRMF-DMMQDNGICPDDVTLVGVLNACAHGGLVDEGL 373
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVN 267
+ + TP + + ++D+ + G L EA + MP + N + W + +S
Sbjct: 374 GYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKV 433
Query: 268 CGQLE 272
G +E
Sbjct: 434 HGNME 438
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 324/586 (55%), Gaps = 47/586 (8%)
Query: 49 QSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGE 108
+ PCL+ I KK +++ L RG+ D+ T + + +++G+
Sbjct: 23 RRPCLVE---AIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGK 79
Query: 109 KVHGYVVKTGLE--------------------------FDT------YVCNSIMDMYGVL 136
+VH ++ TGL+ FD Y N+++ Y L
Sbjct: 80 RVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKL 139
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ---GCNLMPDEGTV 193
G I +KLFD+MP+KDVVSWN + H +C +++A+ + RQ CN G
Sbjct: 140 GMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGV- 198
Query: 194 VSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
L+ C LK + L +++H + + ++ +++LD Y KCG + +AR+LFDEM
Sbjct: 199 ---LTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSA 255
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
++V+ WT+MVSGY G ++ A +LF P ++ V WTA+I+GY + +A+ LF +M
Sbjct: 256 RDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKM 315
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ ++PD+F + L CA + +L+ GK IH Y+ + +V +ALI+MY+KCG +
Sbjct: 316 MLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSL 375
Query: 373 EKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
++F + K D W +II LA +G +A+++ M+ GAKPD ITF+ +L+A
Sbjct: 376 GIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNA 435
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
CSH GLV +G FF +M+ Y I P EHY CLIDLLGRAG +E + + K+P + ++
Sbjct: 436 CSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDR 495
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
+ + ALL CRI+G++++G K A L ++E + S+ + LL++IYA RWE V VRQ
Sbjct: 496 V---WNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQ 552
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
M E V+K S +EI +H F V D SH ++IYS+L+++A
Sbjct: 553 LMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSVLEQLA 598
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 182/398 (45%), Gaps = 67/398 (16%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + ++++N ++ A A+ G + ++L +S+ R+ G+ + F++ V
Sbjct: 145 ARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVK 204
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L EV +VHG ++ G + + +S++D Y G + + +KLFDEM +DV++W
Sbjct: 205 LKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTM 264
Query: 161 ISGHVKCMRFEDAVDVFRRM----------------RQGC--------------NLMPDE 190
+SG+ K + A ++F M R G ++ PD+
Sbjct: 265 VSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQ 324
Query: 191 GTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELFD 248
T S L AC ++ +L+ GK+IH Y+ + F P I+ +AL+DMY KCG L R++FD
Sbjct: 325 FTFSSCLCACASIASLKHGKQIHAYL-LRINFQPNTIVVSALIDMYSKCGSLGIGRKVFD 383
Query: 249 EMPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
M NK +V+ W +++S G E+A + D D+V A
Sbjct: 384 LMGNKLDVVLWNTIISALAQHGCGEEAIQMLD-----DMVRSGA---------------- 422
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMY 366
KPDK V +L C+ G ++QG + + I LI++
Sbjct: 423 ----------KPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLL 472
Query: 367 AKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKI 403
+ G E+ ++ ++ K D W +++ ++G I
Sbjct: 473 GRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHI 510
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 305/503 (60%), Gaps = 12/503 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVL--GKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++ H V+K+GL +V + +++ G + + KLF + + +N I +
Sbjct: 22 KQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMIKALL 81
Query: 166 KCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFT 223
F +A+ VF + R G + PD T+ L A + N+ LG+ IH I
Sbjct: 82 LRGEFLNAIAVFSAIFRNG--IHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVN 139
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+GN+LL MY + AR++FDEMP + + WT M+ GY N G ++ AR+LFD + V
Sbjct: 140 EFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMATV 199
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+D +W AMI+GYVQ N F E + +FR MQ+ ++PD+ I+V +L+ CA +GAL+ G WI
Sbjct: 200 KDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWI 259
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H Y+ + + V+T LI+MYAKCG ++ A +F E+ ++D W ++I G+AM+G
Sbjct: 260 HRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDG 319
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
A++LF +M G KPD+ITFI VL+ACS+ G+VDEG R +N M+ V++I+PK EHYGC
Sbjct: 320 EGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGC 379
Query: 464 LIDLLGRAGLLDEAEELIRKIP---NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
+IDLL R G +EAE +I+++P + + E + + A LSAC +G E A L
Sbjct: 380 VIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVA--WRAFLSACCKHGQTQQAEVAAERLF 437
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++E + S + LL+N+YA+ + ED VR MK GV KVPGCSSI++NG+++EF+ G+
Sbjct: 438 QLE-RHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGE 496
Query: 581 PSHSEMKEIYSMLDRMAKTLLDS 603
+H + I+ +L+ + K ++++
Sbjct: 497 KTHRHIDNIHLVLEELNKQIVEA 519
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 70/444 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQ AQ+ + GL + L++L+ FC +G+L +A K+F IQ P + +N +I
Sbjct: 18 MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KA +G F ++ +FS + G+ PD +T P+V KA + + GE +H +K G
Sbjct: 78 KALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSA 137
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV--------------------- 159
+ +V NS++ MY + + +++FDEMP+ VSW V
Sbjct: 138 VNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197
Query: 160 ----------SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
ISG+V+ F++ + +FR M Q + PDE +V+ LSAC + L+ G
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLM-QLTEVEPDEAIIVTILSACAHMGALDTG 256
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
IHRY+ + L T + L+DMY KCG L A+ LF+EM ++ +CW +M+SG
Sbjct: 257 IWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMD 316
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G E A+ LF EM+ +KPD +A+L
Sbjct: 317 GDGEG-------------------------------AIKLFMEMEKAGIKPDNITFIAVL 345
Query: 329 TGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELRE--- 384
C+ G +++G I ++ ++I + +I++ ++ G E+A + L +
Sbjct: 346 AACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTAS 405
Query: 385 --KDAASWTSIICGLAMNGKINKA 406
++A +W + + +G+ +A
Sbjct: 406 PSEEAVAWRAFLSACCKHGQTQQA 429
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 8/232 (3%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+ +I + + F++ L +F ++ V PD + A +G + G +H Y+
Sbjct: 205 WGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWIHRYLG 264
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
+ GL V ++DMY G + K LF+EM +D V WN ISG E A+
Sbjct: 265 RLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIK 324
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDM 233
+F M + + PD T ++ L+AC+ ++ G I ++ + P + ++D+
Sbjct: 325 LFMEMEKA-GIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDL 383
Query: 234 YCKCGCLSEARELFDEM-----PNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ G EA + + P++ + W + +S GQ ++A +R
Sbjct: 384 LSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAER 435
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A+ +F + + +N +I A G ++ LF ++ + G+ PDN T+ V
Sbjct: 286 GHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVL 345
Query: 96 KAVGWLGEVKKGEKV---HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM--- 149
A G V +G ++ V K + + Y C ++D+ +G+ + + +
Sbjct: 346 AACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGC--VIDLLSRVGRFEEAEGVIQRLPKT 403
Query: 150 --PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
P ++ V+W +S K + + A R+ Q
Sbjct: 404 ASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLFQ 438
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/600 (34%), Positives = 335/600 (55%), Gaps = 44/600 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ + + + G+ +P+ + + + + G ++ A +IF S ++ +NL++ A+
Sbjct: 264 KQLHSYLLKAGM--SPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYG 321
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ KS LF ++ GV P+ FTYP + + + GE+ GE++H +KTG E D Y
Sbjct: 322 QISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMY 381
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V ++DMY G + +++ + + KDVVSW I+G+V+ ++A++ F+ M Q
Sbjct: 382 VSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDM-QLF 440
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHR--YINQELEFTPIMGNALLDMYCKCGCLSE 242
+ PD + S +SAC +K + G++IH Y++ I NAL+++Y +CG E
Sbjct: 441 GIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIW-NALVNLYARCGRSKE 499
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A LF+ + +K+ I W MVSG+ G +
Sbjct: 500 AFSLFEAIEHKDKITWNGMVSGFAQSGL-------------------------------Y 528
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+EA+ +F +M +K + F V+ ++ A L ++QGK IH + + T + VA AL
Sbjct: 529 EEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANAL 588
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I +Y KCG IE A F+E+ E++ SW +II + +G +AL+LF QM G KP+D
Sbjct: 589 ISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPND 648
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+TFIGVL+ACSH GLV+EG +F +M+ + I P+ +HY C++D+LGRAG LD A + +
Sbjct: 649 VTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVE 708
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P N ++ + LLSACR++ N+++GE A L ++E DS+ + LL+N YA +
Sbjct: 709 EMPVSANAMV---WRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGK 765
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML----DRMAK 598
W +VR+ MK+ GVRK PG S IE+ ++H F VGD H +IY L DR+AK
Sbjct: 766 WACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAK 825
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 221/483 (45%), Gaps = 36/483 (7%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I A+ GL ++ N L+ + G + A ++F + + +++ ++ +A+
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDL--YAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARN 121
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G +++ L+ ++ GV P + V A ++G VH V K G +T V
Sbjct: 122 GLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVG 181
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++ +Y G + +++F EMP D V++N IS H +C E A+++F MR
Sbjct: 182 NALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLS-GW 240
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARE 245
PD T+ S L+AC ++ +L GK++H Y + + I+ +LLD+Y KCG + EA E
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+F NV+ W M+ Y GQ+ FD
Sbjct: 301 IFKSGDRTNVVLWNLMLVAY---GQISDLAKSFD-------------------------- 331
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
LF +M ++P++F LL C G + G+ IH + D V+ LI+M
Sbjct: 332 --LFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDM 389
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
Y+K G ++KA I L KD SWTS+I G + +ALE F M G PD+I
Sbjct: 390 YSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGL 449
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
+SAC+ + +G++ ++ V + + L++L R G EA L I
Sbjct: 450 ASAISACAGIKAMRQGQQ-IHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE 508
Query: 486 NEN 488
+++
Sbjct: 509 HKD 511
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 161/348 (46%), Gaps = 36/348 (10%)
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
++ Y G +++AR +F++ RD V W AM++GY + +EAV L+ +M + P
Sbjct: 83 LIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPT 142
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
++L ++L+ C + EQG+ +H + + + VV ALI +Y + G + A +F
Sbjct: 143 PYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFS 202
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
E+ D ++ ++I A G ALE+F +M G PD +T +L+AC+ G +++
Sbjct: 203 EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPL- 495
G++ + + + + P G L+DL + G++ EA E+ + N N ++V
Sbjct: 263 GKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYG 321
Query: 496 --------------------------YGALLSACRIYGNVDMGEKLAALLEKIE-SKDSS 528
Y LL C G +++GE++ L K D
Sbjct: 322 QISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMY 381
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+L ++Y S W D R+ ++ + + V +S+ + HEF
Sbjct: 382 VSGVLIDMY-SKYGWLD--KARRILEVLEAKDVVSWTSMIAGYVQHEF 426
>gi|115441803|ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa Japonica Group]
Length = 589
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 316/558 (56%), Gaps = 48/558 (8%)
Query: 40 YAEKIFGSIQ---SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
+A+ +F + S +N L++ A S R+SLL FS++R V+PD +T+P V K
Sbjct: 66 HADSVFAHLAEEASRHAFPWNTLVRLHAA-ASPRRSLLYFSRMRRAAVAPDAYTFPAVLK 124
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A G + G VHG V+TGL+ D + N+++ Y +G + +K+FD +D+VS
Sbjct: 125 ACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGV-RDLVS 183
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN ++G+V C + A D+F MRQ S T
Sbjct: 184 WNSMVAGYVGCGEVDLAQDLFDEMRQ-----------RDAFSWAT--------------- 217
Query: 217 NQELEFTPIMGNALLDMYCK-CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
++D Y + G + ARELFD+MP+++++CW SM+ GY G++++AR
Sbjct: 218 -------------MIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEAR 264
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
LF+ P R+++ W+ +I+GYV+F +EA+ F+ M +KPD+ V + CAQLG
Sbjct: 265 VLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLG 324
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
ALEQG+W+H Y+ + ++ D VV TALI+MY KCG ++ A IF + +K +W +I
Sbjct: 325 ALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIV 384
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
GL +G A++LF+QM + A DD++ + VL++C+H GLV EG F M + ++
Sbjct: 385 GLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLE 444
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
PK+EHYG LIDLLGRAG +D+A I +P E L+G+LL++CR + V++ E
Sbjct: 445 PKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTP---ELWGSLLASCRSHRCVELAELS 501
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
L + + DS + LL+NIYA W+DV +R+ M G++K G S IE++G IHE
Sbjct: 502 VERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQIHE 561
Query: 576 FLVGDPSHSEMKEIYSML 593
F+ G SH +EIY L
Sbjct: 562 FVNGGSSHPHKEEIYLTL 579
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ HG + A +F + +++++++I + + G ++L F ++ G+ PD
Sbjct: 254 YARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAA 313
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A LG +++G +H Y+ K + FD V +++DMY G++ K +F+ MP
Sbjct: 314 VGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPK 373
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K VV+WNV I G DA+ +F +M M D+ ++++ L++CT + G
Sbjct: 374 KSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPM-DDLSILAVLTSCTHAGLVSEGLG 432
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
I + ++L P + + AL+D+ + G + +AR + MP
Sbjct: 433 IFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMP 474
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 190/466 (40%), Positives = 297/466 (63%), Gaps = 14/466 (3%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++FD + + + WN + +++ E A+ +++ M + N+ PD T + AC A+
Sbjct: 84 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKN-NVGPDNYTYPLVVQAC-AV 141
Query: 204 KNLELG-KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+ LE G KEIH ++ + + + N L++MY CG + +AR+LFDE P + + W S+
Sbjct: 142 RLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSI 201
Query: 262 VSGYV---NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
++GYV + GQ+ +A LF+ +D+V W+A+I+GY Q ++EA+ +F EM ++
Sbjct: 202 LAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 261
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA----KCGLIEK 374
D+ ++V++L+ CA L ++ GK IHG + I + ALI MY+ KCG +E
Sbjct: 262 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVEN 321
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
ALE+F + EK +SW ++I GLA+NG + ++L++FS+M + G P++ITF+GVL AC H
Sbjct: 322 ALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRH 381
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP 494
GLVDEGR F +M E + I+P ++HYGC++DLLGRAGLL+EAE+LI +P + V
Sbjct: 382 MGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPD---VA 438
Query: 495 LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMK 554
+GALL AC+ +G+ +MGE++ L +++ FH LL+NI+AS WEDV VR MK
Sbjct: 439 TWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMK 498
Query: 555 EMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+ GV K PGCS IE NG++HEFL GD +H + ++ ML+ MAK L
Sbjct: 499 QQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRL 544
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 215/471 (45%), Gaps = 75/471 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q +I +Q+ G + ++L+ F T L Y+ +IF I++ +N ++
Sbjct: 42 LKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMM 101
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ + S K+LLL+ + + V PDN+TYP V +A G+++H +V+K G +
Sbjct: 102 RAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFD 161
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMP------------------------------ 150
D YV N++++MY V G + + +KLFDE P
Sbjct: 162 SDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLF 221
Query: 151 ----DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
+KD+VSW+ ISG+ + +E+A+ +F M + DE VVS LSAC L +
Sbjct: 222 NEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN-GMRLDEVVVVSVLSACAHLSIV 280
Query: 207 ELGKEIHRY-INQELEFTPIMGNALL----DMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+ GK IH I +E + NAL+ DMY KCGC+ A E+F+ M K V W ++
Sbjct: 281 KTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNAL 340
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ G G +E++ D+F EM+ + P++
Sbjct: 341 IIGLAVNGLVERSLDMFS-------------------------------EMKNNGVIPNE 369
Query: 322 FILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+ +L C +G +++G+ I ++ I + ++++ + GL+ +A ++
Sbjct: 370 ITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIE 429
Query: 381 EL-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
+ D A+W +++ +G + ++I +PD F +LS
Sbjct: 430 SMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE--LQPDHDGFHVLLS 478
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 323/576 (56%), Gaps = 18/576 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAK--KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
A +F +I P +YN ++ A A+ +G +L + + + +++ A
Sbjct: 102 ARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSAC 161
Query: 99 GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
+ + GE+VHG V ++ D ++ ++++DMY + + +++FD MP+++VVSWN
Sbjct: 162 AAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWN 221
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
I+ + + +A+ +F M PDE T+ S +SAC L G+++H ++ +
Sbjct: 222 SLITCYEQNGPVGEALMLFVEM-MAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVK 280
Query: 219 --ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
L ++ NAL+DMY KCG EAR +FD MP+++++ TS+++GY +E A+
Sbjct: 281 CDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQV 340
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
+F + ++++ W +I Y Q +EA+ LF +++ + P + +L C +
Sbjct: 341 VFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAD 400
Query: 337 LEQGKWIH------GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
L+ G+ H G+ + D V +L++MY K G I+ ++F + +D SW
Sbjct: 401 LQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSW 460
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I G A NG+ AL LF +M+ PD +T IGVLSAC H GLVDEGRR+F++MTE
Sbjct: 461 NAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTE 520
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
+ I P +HY C++DLLGRAG L EAEELI +P E + + L+ +LL ACR++ NV+
Sbjct: 521 DHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSV---LWASLLGACRLHKNVE 577
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+GE A L +++ ++S + LL+N+YA +W +V VR+ MK+ GV K PGCS IEI
Sbjct: 578 LGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIG 637
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLD----RMAKTLLD 602
++ FL D H EI++ L M +T +D
Sbjct: 638 RKMNVFLARDKRHPCRNEIHNTLRIIQMEMGRTSID 673
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 199/457 (43%), Gaps = 115/457 (25%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
H ++K+ + +T++ N+++ Y LG++ + +++FDE+P ++ S+N +S + + R
Sbjct: 39 AHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGR 98
Query: 170 FEDAVDVFRRM----------------RQGCNLMPD----------------EGTVVSTL 197
++A +F + R G D + S L
Sbjct: 99 PDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASAL 158
Query: 198 SACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
SAC A K+ G+++H + + + + +AL+DMY KC +AR +FD MP +NV+
Sbjct: 159 SACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVV 218
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
W S+++ Y G PV EA+ LF EM
Sbjct: 219 SWNSLITCYEQNG------------PV-------------------GEALMLFVEMMAAG 247
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGL---- 371
PD+ L ++++ CA L A +G+ +H ++ + +R+ D V+ AL++MYAKCG
Sbjct: 248 FSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEA 307
Query: 372 ---------------------------IEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+E A +F ++ EK+ +W +I A NG+
Sbjct: 308 RCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEE 367
Query: 405 KALELFSQMISGGAKPDDITFIGVLSAC-----------SHGGLVDEGRRF-FNTMTEVY 452
+A+ LF Q+ P T+ VL+AC +H ++ EG RF F ++V+
Sbjct: 368 EAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVF 427
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
L+D+ + G +D+ ++ ++ +N
Sbjct: 428 VGN-------SLVDMYLKTGSIDDGAKVFERMAARDN 457
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 151/292 (51%), Gaps = 17/292 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
N+ A+ +F + ++A+N+LI A+A+ G +++ LF +L+ + P ++TY V
Sbjct: 333 ANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVL 392
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEF------DTYVCNSIMDMYGVLGKICNVKKLFDEM 149
A G + +++ G++ H +V+K G F D +V NS++DMY G I + K+F+ M
Sbjct: 393 NACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 452
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
+D VSWN I G+ + R +DA+ +F RM N PD T++ LSAC ++ G
Sbjct: 453 AARDNVSWNAMIVGYAQNGRAKDALHLFERM-LCSNENPDSVTMIGVLSACGHSGLVDEG 511
Query: 210 KEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG-- 264
+ + ++ TP + ++D+ + G L EA EL ++MP + + W S++
Sbjct: 512 RRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACR 571
Query: 265 ---YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
V G+ R LF+ P ++ + + N Y + ++ E + R M+
Sbjct: 572 LHKNVELGEWTAGR-LFELDP-QNSGPYVLLSNMYAEMGKWAEVFRVRRSMK 621
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 188/496 (37%), Positives = 296/496 (59%), Gaps = 16/496 (3%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H +++ GL + + Y LG + + LF P+ +V W I+ H
Sbjct: 41 QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFD 100
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMG 227
F A+ + +M + P+ T+ S L ACT L + +H + I L +
Sbjct: 101 LFHHALSYYSQMLTH-PIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVS 155
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
L+D Y + G ++ A++LFD MP ++++ +T+M++ Y G L +AR LF+ ++D+V
Sbjct: 156 TGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVV 215
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQII-------RLKPDKFILVALLTGCAQLGALEQG 340
W MI+GY Q +EA+ FR+M ++ +++P++ +VA+L+ C Q+GALE G
Sbjct: 216 CWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG 275
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
KW+H Y+ N I V+ V TAL++MY KCG +E A ++F + KD +W S+I G ++
Sbjct: 276 KWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIH 335
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G ++AL+LF +M G KP DITF+ VL+AC+H GLV +G F++M + Y ++PK+EH
Sbjct: 336 GFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEH 395
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC+++LLGRAG + EA +L+R + E + + L+G LL ACRI+ NV +GE++A +L
Sbjct: 396 YGCMVNLLGRAGRMQEAYDLVRSMEVEPDPV---LWGTLLWACRIHSNVSLGEEIAEILV 452
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
S + LL+N+YA+A W V VR MK GV K PGCSSIE+ +HEF+ GD
Sbjct: 453 SNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGD 512
Query: 581 PSHSEMKEIYSMLDRM 596
H K+IYSML++M
Sbjct: 513 RRHPRSKDIYSMLEKM 528
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 21/261 (8%)
Query: 27 MVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG--- 83
M+ C + HG L A +F + ++ +N++I +A+ G ++L+ F K+
Sbjct: 189 MLTC-YAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGN 247
Query: 84 ----VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI 139
V P+ T V + G +G ++ G+ VH YV G++ + V +++DMY G +
Sbjct: 248 GNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSL 307
Query: 140 CNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC--NLMPDEGTVVSTL 197
+ +K+FD M KDVV+WN I G+ ++A+ +F M C + P + T V+ L
Sbjct: 308 EDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEM---CCIGVKPSDITFVAVL 364
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEM---PN 252
+AC + G E+ + P + + ++++ + G + EA +L M P+
Sbjct: 365 TACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPD 424
Query: 253 K---NVICWTSMVSGYVNCGQ 270
+ W + V+ G+
Sbjct: 425 PVLWGTLLWACRIHSNVSLGE 445
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/587 (32%), Positives = 333/587 (56%), Gaps = 8/587 (1%)
Query: 13 QIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKS 72
Q +NP + + + + + +A +IF S+ ++++N++I A +K G R++
Sbjct: 216 QFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREA 275
Query: 73 LLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDM 132
L + + +GV PD+ TY A L ++ G+++H V++ D YV ++++++
Sbjct: 276 LDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVEL 335
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEG 191
Y G K++F + D++ VSW V I G ++ F ++V++F +MR LM D+
Sbjct: 336 YAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMR--AELMAVDQF 393
Query: 192 TVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
+ + +S C ++ LG ++H + ++ N+L+ MY KCG L A +F+ M
Sbjct: 394 ALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFM 453
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
++++ WT M++ Y G + KAR+ FD R+++ W AM+ Y+Q ++ + ++
Sbjct: 454 AERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYS 513
Query: 311 EMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
+M + + PD V L GCA +GA + G I G+ + + +D V A+I MY+KC
Sbjct: 514 DMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKC 573
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
G I +A + F L KD SW ++I G + +G +A+E+F +++ GAKPD I+++ VL
Sbjct: 574 GRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVL 633
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
S CSH GLV+EG+ +F+ M + I P LEH+ C++DLLGRAG L EA+ LI ++P +
Sbjct: 634 SGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPT 693
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
++GALLSAC+ +GN D+ E A L ++S S + LLA +YA A + +D V
Sbjct: 694 ---AEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQV 750
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
R+ M++ G++K PG S +E+N +H F D SH ++ I LD +
Sbjct: 751 RKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDEL 797
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 171/307 (55%), Gaps = 1/307 (0%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N +M+ Y LG + + +LF MP +DV SWN +SG+ + +F +A+D+F MRQ +
Sbjct: 96 NIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDS 155
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARE 245
+P+ T + +C AL E+ ++ +++ + + P + AL+DM +CG + A +
Sbjct: 156 LPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASK 215
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
F + N +IC SM+ GY ++ A ++F P RD+V W +I+ + R EA
Sbjct: 216 QFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREA 275
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ + +M ++PD + LT CA+L +LE GK +H + N +D VA+A++E+
Sbjct: 276 LDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVEL 335
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
YAKCG ++A +F LR++++ SWT +I G G ++++ELF+QM + D
Sbjct: 336 YAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFAL 395
Query: 426 IGVLSAC 432
++S C
Sbjct: 396 ATLISGC 402
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 224/475 (47%), Gaps = 69/475 (14%)
Query: 20 PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL 79
P + ++ + G+L A ++FG + + + ++N ++ + + G F +L +F +
Sbjct: 90 PNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSM 149
Query: 80 RERGVS-PDNFTYPFVFK---AVGW-------LGEVKKGEKVHGYVVKTGL--------- 119
R+ G S P+ FT+ V K A+GW LG + K + V+T L
Sbjct: 150 RQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA 209
Query: 120 ------EFD-----TYVC-NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+F T +C NS++ Y + + ++F MP++DVVSWN+ IS K
Sbjct: 210 MDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKS 269
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIM 226
R +A+D+ M G + PD T S+L+AC L +LE GK++H + + L P +
Sbjct: 270 GRVREALDMVVDM-HGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYV 328
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
+A++++Y KCGC EA+ +F + ++N + WT ++ G
Sbjct: 329 ASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGG---------------------- 366
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
++Q+ F E+V LF +M+ + D+F L L++GC + G +H
Sbjct: 367 ---------FLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSL 417
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
++ T VV+ +LI MYAKCG ++ A IF + E+D SWT +I + G I KA
Sbjct: 418 CLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKA 477
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
E F M + + IT+ +L A G ++G + ++ M + P Y
Sbjct: 478 REFFDDM----STRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTY 528
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 155/345 (44%), Gaps = 39/345 (11%)
Query: 192 TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF-DE 249
+ L +C A L + +H R IN L + N LL Y CG LS+AR L DE
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
+ NVI M++GY G L A +LF R P RD+ W +++GY Q +F A+ +F
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146
Query: 310 REM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
M Q P+ F ++ C LG E + G +++ D V TAL++M +
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVR 206
Query: 369 CGL-------------------------------IEKALEIFYELREKDAASWTSIICGL 397
CG ++ ALEIF + E+D SW +I L
Sbjct: 207 CGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISAL 266
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+ +G++ +AL++ M G +PD T+ L+AC+ ++ G++ +V + P
Sbjct: 267 SKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLH---VQVIRNLPH 323
Query: 458 LEHY--GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
++ Y +++L + G EA+ + + + N+ L G L
Sbjct: 324 IDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFL 368
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 316/564 (56%), Gaps = 35/564 (6%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F + + +N +I + + G+F+ +L F +R G P++ T + L +
Sbjct: 163 LFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+ +G ++H ++ +G D+++ ++++DMYG G + ++F++MP K VV+WN ISG
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISG 282
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEF 222
+ + +F+RM + P T+ S + C+ L GK +H Y I ++
Sbjct: 283 YGLKGDIISCIQLFKRMYNE-GVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQP 341
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ ++L+D+Y KC G++E A +F P
Sbjct: 342 DVFVNSSLMDLYFKC-------------------------------GKVELAEKIFKLIP 370
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+V W MI+GYV + EA+ LF EM+ ++ D ++LT C+QL ALE+GK
Sbjct: 371 KSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKE 430
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH I E ++ + VV AL++MYAKCG +++A +F L ++D SWTS+I +G
Sbjct: 431 IHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGH 490
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
ALELF++M+ KPD + F+ +LSAC H GLVDEG +FN M VY I P++EHY
Sbjct: 491 AYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYS 550
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
CLIDLLGRAG L EA E++++ P ++ V L L SACR++ N+D+G ++A L
Sbjct: 551 CLIDLLGRAGRLHEAYEILQQNPEIRDD--VELLSTLFSACRLHRNIDLGAEIARTLIDK 608
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
+ DSS + LL+N+YASA++W++V VR KMKE+G++K PGCS IEIN I F V D S
Sbjct: 609 DPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNS 668
Query: 583 HSEMKEIYSMLDRMAKTLLDSKQN 606
H ++ ++ L ++ + D ++
Sbjct: 669 HLHLELVFKCLSYLSDHMEDESKS 692
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 261/521 (50%), Gaps = 52/521 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNP---ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA-Y 56
+ Q K I ++ +GLQ + +TL + C H A+ +F ++++PC ++ +
Sbjct: 19 LKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDH-----AKCVFDNMENPCEISLW 73
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
N L+ + K + ++L LF KL + PD++TYP VFKA G L G+ +H ++
Sbjct: 74 NGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLI 133
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
KTGL D V +S++ MYG LF+EMP+KDV WN IS + + F+DA++
Sbjct: 134 KTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALE 193
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMY 234
F MR+ P+ T+ + +S+C L +L G EIH IN + +AL+DMY
Sbjct: 194 YFGLMRRF-GFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMY 252
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KC G LE A ++F++ P + +V W +MI+
Sbjct: 253 GKC-------------------------------GHLEMAIEIFEQMPKKTVVAWNSMIS 281
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY + LF+ M +KP L +L+ C++ L +GK++HGY NRI
Sbjct: 282 GYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQP 341
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D V ++L+++Y KCG +E A +IF + + SW +I G GK+ +AL LFS+M
Sbjct: 342 DVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMR 401
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----YGCLIDLLGR 470
+ D ITF VL+ACS +++G+ N + I+ KL++ G L+D+ +
Sbjct: 402 KSYVESDAITFTSVLTACSQLAALEKGKEIHNLI-----IEKKLDNNEVVMGALLDMYAK 456
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
G +DEA + + +P + + A S YG +++
Sbjct: 457 CGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALEL 497
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 164/370 (44%), Gaps = 74/370 (20%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
D ++ L AC K+L+ GK IH + + L+ + L++ Y C A+ +F
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61
Query: 248 DEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDR-------SP----------------- 282
D M N + W +++GY +A +LF++ P
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121
Query: 283 ----------------VRDIVLWTAMINGYVQFNRFDEAVALFREMQ------------- 313
+ DIV+ ++++ Y + N F++A+ LF EM
Sbjct: 122 YVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISC 181
Query: 314 ---------------IIR---LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
++R +P+ + ++ CA+L L +G IH + + +D
Sbjct: 182 YYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD 241
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ +++AL++MY KCG +E A+EIF ++ +K +W S+I G + G I ++LF +M +
Sbjct: 242 SFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYN 301
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G KP T ++ CS + EG +F + T +IQP + L+DL + G ++
Sbjct: 302 EGVKPTLTTLSSLIMVCSRSARLLEG-KFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVE 360
Query: 476 EAEELIRKIP 485
AE++ + IP
Sbjct: 361 LAEKIFKLIP 370
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 146/297 (49%), Gaps = 18/297 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + AEKIF I ++++N++I + +G ++L LFS++R+ V D T+ V
Sbjct: 357 GKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVL 416
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A L ++KG+++H +++ L+ + V +++DMY G + +F +P +D+V
Sbjct: 417 TACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLV 476
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW I+ + A+++F M Q N+ PD ++ LSAC + L E Y
Sbjct: 477 SWTSMITAYGSHGHAYGALELFAEMLQS-NVKPDRVAFLAILSACG---HAGLVDEGCYY 532
Query: 216 INQELEFTPIMG-----NALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSG---- 264
NQ + I+ + L+D+ + G L EA E+ + P +V +++ S
Sbjct: 533 FNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592
Query: 265 -YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
++ G E AR L D+ P D + + N Y +++DE + +M+ + LK +
Sbjct: 593 RNIDLGA-EIARTLIDKDP-DDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKN 647
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 205/613 (33%), Positives = 352/613 (57%), Gaps = 44/613 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA--YNLLIKA 62
+ + + + ++ N N L+V + G+L AE++F ++ PC + + +I
Sbjct: 221 RSVHGYVVRREIESNASLNNSLIVM--YGKLGDLYSAERLFENV--PCRMTAPWTPMISC 276
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ + G F+++L +F+K++E + P+ T V A LG VK+G VHG+V++ ++ +
Sbjct: 277 YNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPE 336
Query: 123 -TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
++ ++M++Y G + + K+F+ + +K ++SWN IS + + E+A+ +F +M
Sbjct: 337 LDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM- 395
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
Q LMPD ++ S+LSAC + +LG +IH YI + F + NAL+DMY KC
Sbjct: 396 QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKC---- 451
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
G + A +F++ + +V W +MI G+ Q
Sbjct: 452 ---------------------------GFVHSANKMFEKIKEKSLVTWNSMICGFSQNGY 484
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
EA+ LF +M + +K DK ++++ C+ LG LE+GKW+H + + D+ + TA
Sbjct: 485 SVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTA 544
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L +MY+KCG ++ A +F + E+ SW+ +I G M+G+IN + LF+QM+ G KP+
Sbjct: 545 LTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPN 604
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
DITF+ +LSACSH G V+EG+ +FN+M+E + ++PK +H+ C++DLL RAG L+ A ++I
Sbjct: 605 DITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQII 663
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P N I +GALL+ CRI+ +D+ + + L +++ D+ ++TLL+NIYA
Sbjct: 664 TSLPFPANSSI---WGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEG 720
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
W+ VR MK G+RKVPG S+IEI+ I+ F GD SHS+ K+IY L+ ++L+
Sbjct: 721 TWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENF-RSLV 779
Query: 602 DSKQNAMEGDNLV 614
++ E DN +
Sbjct: 780 HAQVYDSEPDNSI 792
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 241/490 (49%), Gaps = 39/490 (7%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
T L Q+ A +F GL ++P KL+ ++ G ++++F + P + +LIK
Sbjct: 15 TTLTQLHAHLFITGLHRHPPASTKLIE--SYAQIGIFESSKRVFDTFPKPDSFMWGVLIK 72
Query: 62 AFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ G F +++ L+ ++ + NF +P V KA G++ G KVHG V+K G E
Sbjct: 73 CYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFE 132
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V S++ MYG + + + K FD MP +DVV+W+ + V+ + + +D+F +M
Sbjct: 133 SDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQM 192
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
+ PD T++S AC+ L +L LG+ +H Y + +E+E + N+L+ MY K G
Sbjct: 193 ISEA-VEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGD 251
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L A LF+ +P + WT M+S Y G
Sbjct: 252 LYSAERLFENVPCRMTAPWTPMISCYNQSGC----------------------------- 282
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA-VV 358
F EA+ +F +MQ +++P++ +V +L CA+LG +++G+ +HG++ + + +
Sbjct: 283 --FQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFL 340
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
AL+E+YA G + ++F ++EK SW ++I NG+ +AL LF QM + G
Sbjct: 341 GPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGL 400
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD + LSAC G + + + +++ LID+ + G + A
Sbjct: 401 MPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSAN 458
Query: 479 ELIRKIPNEN 488
++ KI ++
Sbjct: 459 KMFEKIKEKS 468
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 270/543 (49%), Gaps = 51/543 (9%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ ++ + G + + L+ C + L A K F ++ ++A++ ++ F +
Sbjct: 121 KVHGRVIKCGFESDAVVETSLL--CMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQ 178
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G + L +FS++ V PD+ T V +A LG ++ G VHGYVV+ +E + +
Sbjct: 179 NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASL 238
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
NS++ MYG LG + + ++LF+ +P + W IS + + F++A++VF +M Q
Sbjct: 239 NNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKM-QEFK 297
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIH-----RYINQELEFTPIMGNALLDMYCKCGCL 240
+ P++ T+V L AC L ++ G+ +H R ++ EL+F +G AL+++Y G L
Sbjct: 298 MEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF---LGPALMELYADTGNL 354
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+ ++F+ + K ++ W +++S + GQ E
Sbjct: 355 RDCHKVFETIKEKTILSWNTLISIFTRNGQPE---------------------------- 386
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LF +MQ L PD + L + L+ C + + G IHGYI + + V
Sbjct: 387 ---EALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQN 442
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MYAKCG + A ++F +++EK +W S+ICG + NG +A+ LF QM K
Sbjct: 443 ALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKM 502
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D +TF+ V+ ACSH G +++G+ + + +Y ++ L D+ + G L A +
Sbjct: 503 DKLTFLSVIQACSHLGYLEKGKWVHHKLI-MYGLRKDSYLDTALTDMYSKCGELQMAHGV 561
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL--AALLEKIESKDSSF-HTLLANIY 537
++ +E + + +++ ++G ++ L L I+ D +F H L A +
Sbjct: 562 FDRM----SERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSH 617
Query: 538 ASA 540
A A
Sbjct: 618 AGA 620
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 328/560 (58%), Gaps = 7/560 (1%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVG 99
A ++F S+ ++YN L+ + ++G ++L L+ ++ E G+ PD FT+ +
Sbjct: 431 AHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCA 490
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
+G ++H ++++ + + V ++ MY G++ K++F+ M +++ SWN
Sbjct: 491 NQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNS 550
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQ 218
I G+ + ++A+ +F++M Q + PD ++ S LS+C +L + + G+E+H +I
Sbjct: 551 MIEGYQQNGETQEALRLFKQM-QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
+E I+ L+DMY KCG + A +++D+ K+VI MVS +VN G+ A++LF
Sbjct: 610 TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLF 669
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
D+ R+ LW +++ GY E+ F EM ++ D +V ++ C+ L ALE
Sbjct: 670 DQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALE 729
Query: 339 QGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
G +H I + + V+ TAL++MY+KCG I KA +F + K+ SW ++I G
Sbjct: 730 HGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGY 789
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+ +G +AL L+ +M G P+++TF+ +LSACSH GLV+EG R F +M E Y I+ K
Sbjct: 790 SKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAK 849
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
EHY C++DLLGRAG L++A+E + K+P E V +GALL ACR++ ++DMG A
Sbjct: 850 AEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPE---VSTWGALLGACRVHKDMDMGRLAAQ 906
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
L +++ ++ + +++NIYA+A RW++V ++RQ MK GV+K PG S IEIN I F
Sbjct: 907 RLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFH 966
Query: 578 VGDPSHSEMKEIYSMLDRMA 597
G +H + +EIY+ L +
Sbjct: 967 AGSKTHPKTEEIYNNLRHLT 986
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 244/487 (50%), Gaps = 36/487 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNK-LMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
K I Q+ G + + K LM++ +L YA K+F + L A+N +I A+
Sbjct: 91 KSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAY 150
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
A+ + + L L+ ++R G D FT+P V KA + ++ ++ VVK GL +
Sbjct: 151 ARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNL 210
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V +++D Y G + + DE+ VV+WN I+G+VK + +E+A +F RM +
Sbjct: 211 FVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLK- 269
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSE 242
+ PD T S L C AL++ + GK++H + I + +GNAL+DMY KC
Sbjct: 270 IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEES 329
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
++FDEM +N + W S++S QF F
Sbjct: 330 CLKVFDEMGERNQVTWNSIIS-------------------------------AEAQFGHF 358
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
++A+ LF MQ K ++F L ++L A L + +G+ +HG++ N + D ++ +AL
Sbjct: 359 NDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSAL 418
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPD 421
++MY+KCG++E+A ++F L E++ S+ +++ G GK +ALEL+ M S G +PD
Sbjct: 419 VDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPD 478
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
TF +L+ C++ ++GR+ + I + L+ + G L+ A+E+
Sbjct: 479 QFTFTTLLTLCANQRNDNQGRQIHAHLIRA-NITKNIIVETELVHMYSECGRLNYAKEIF 537
Query: 482 RKIPNEN 488
++ N
Sbjct: 538 NRMAERN 544
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/577 (22%), Positives = 267/577 (46%), Gaps = 98/577 (16%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
K+F + + +N +I A A+ G F +L+LF +++E G + F + A L
Sbjct: 332 KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLA 391
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++ KG ++HG++V+ L D + ++++DMY G + ++F + +++ VS+N ++
Sbjct: 392 DIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLA 451
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELE 221
G+V+ + E+A++++ M+ + PD+ T + L+ C +N G++IH + I +
Sbjct: 452 GYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 511
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
I+ L+ MY +CG L+ A+E+F+ M +N W SM+ GY G+ +
Sbjct: 512 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQ--------- 562
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
EA+ LF++MQ+ +KPD F L ++L+ C L ++G+
Sbjct: 563 ----------------------EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR 600
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI----------------------- 378
+H +I N + + ++ L++MYAKCG ++ A ++
Sbjct: 601 ELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSG 660
Query: 379 --------FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
F ++ +++ A W SI+ G A G ++ F +M+ + D +T + +++
Sbjct: 661 RANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 720
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN-- 488
CS ++ G + + + + + + L+D+ + G + +A + + +N
Sbjct: 721 LCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIV 780
Query: 489 --NEII------------------VPLYG---------ALLSACRIYGNVDMGEKLAALL 519
N +I +P G A+LSAC G V+ G ++ +
Sbjct: 781 SWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM 840
Query: 520 EK---IESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
++ IE+K + +T + ++ A R ED +KM
Sbjct: 841 QEDYNIEAK-AEHYTCMVDLLGRAGRLEDAKEFVEKM 876
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 202/440 (45%), Gaps = 50/440 (11%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSWNVSI 161
++G+ +H ++ G D Y+ I+ +Y G L +C +KLF+EMP++++ +WN I
Sbjct: 88 QRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMI 147
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-L 220
+ + + + + ++ RMR N D+ T S + AC A++++ +++ + + L
Sbjct: 148 LAYARVDDYMEVLRLYGRMRGSGNF-SDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGL 206
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+G AL+D Y + G + +A DE+ +V+ W ++++GYV E+A +FDR
Sbjct: 207 NCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDR 266
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
M I + PD F + L C L + + G
Sbjct: 267 -------------------------------MLKIGVCPDNFTFASALRVCGALRSRDGG 295
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K +H + D V ALI+MYAKC E L++F E+ E++ +W SII A
Sbjct: 296 KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQF 355
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G N AL LF +M G K + +L A + + +GR + + +
Sbjct: 356 GHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL-LNSDIIL 414
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
L+D+ + G+++EA ++ R + E NE+ Y ALL+ Y E+ L
Sbjct: 415 GSALVDMYSKCGMVEEAHQVFRSLL-ERNEVS---YNALLAG---YVQEGKAEEALELYH 467
Query: 521 KIESKDS------SFHTLLA 534
++S+D +F TLL
Sbjct: 468 DMQSEDGIQPDQFTFTTLLT 487
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 202/427 (47%), Gaps = 67/427 (15%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q +QI A + + + +N +L+ + G L YA++IF + ++N +I+
Sbjct: 496 NQGRQIHAHLIRANITKNIIVETELVHM--YSECGRLNYAKEIFNRMAERNAYSWNSMIE 553
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + G +++L LF +++ G+ PD F+ + + L + +KG ++H ++V+ +E
Sbjct: 554 GYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE 613
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ + ++DMY G + K++D+ KDV+ NV +S V R DA ++F +M
Sbjct: 614 EGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQME 673
Query: 182 QG------------------------------CNLMPDEGTVVSTLSACTALKNLELGKE 211
Q ++ D T+V+ ++ C++L LE G +
Sbjct: 674 QRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQ 733
Query: 212 IHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+H I ++ + + ++ AL+DMY KCG +++AR +FD M KN++ W +M+SGY G
Sbjct: 734 LHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHG 793
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
+ EA+ L+ EM + P++ +A+L+
Sbjct: 794 CSK-------------------------------EALILYEEMPKKGMYPNEVTFLAILS 822
Query: 330 GCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDA 387
C+ G +E+G I + E+ I A T ++++ + G +E A E ++ E +
Sbjct: 823 ACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 882
Query: 388 ASWTSII 394
++W +++
Sbjct: 883 STWGALL 889
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK---ALEIFYEL 382
+L+ C + ++GK IH + N DA + T ++ +YA+ G ++ A ++F E+
Sbjct: 76 SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG- 441
E++ +W ++I A + L L+ +M G D TF V+ AC + D G
Sbjct: 136 PERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACI--AMEDMGG 193
Query: 442 -RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
R+ +++ + + L G L+D R G +D+A
Sbjct: 194 VRQLQSSVVKA-GLNCNLFVGGALVDGYARFGWMDDA 229
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 197/498 (39%), Positives = 294/498 (59%), Gaps = 14/498 (2%)
Query: 105 KKGEKVHGYVVKTGL--EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++ ++H V++TGL D V + Y G++ L D + + +I
Sbjct: 303 RRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAIFYTSAIH 362
Query: 163 GHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQEL 220
H A+ + M QG L+P T+ ++L AC + L G+ +H Y L
Sbjct: 363 AHSSRGHRLPALALLSDMLAQG--LLPTAHTLSASLPAC---RGLSPGRALHGYAFKLAL 417
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ ALL MY + G + AR LFD+M P+ +V+ T+M++ Y + G L+ AR LFD
Sbjct: 418 AGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFD 477
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P +D V W AMI+GY Q R +EA+ LFR M ++PD+ +V +L+ AQLG +E
Sbjct: 478 GLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVES 537
Query: 340 GKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
GKW+H Y+ N R+ + V TALI+MY KCG + A+++F+ + +KD W ++I G A
Sbjct: 538 GKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYA 597
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
M+G KALE+F Q G P DITFIG+L+ACSH G+V+EGR FF +M Y I PK+
Sbjct: 598 MHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKI 657
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
EHYGC++DLLGRAGL+ EA L++ + + + ++ +LL+ACR++ N+ +G+++A
Sbjct: 658 EHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAV---MWVSLLAACRLHKNMSLGQQIADY 714
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
L +S + LL+NIYA+ W +V VR MK G++K PGCSSIEI+ ++EF+
Sbjct: 715 LVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVA 774
Query: 579 GDPSHSEMKEIYSMLDRM 596
GD SH EIY MLD+M
Sbjct: 775 GDMSHPRTDEIYVMLDKM 792
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P ++ + + G L A +F + + + +N +I + + G ++L LF +
Sbjct: 450 DPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRR 509
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT-GLEFDTYVCNSIMDMYGVLG 137
+ GV PD T V AV LG V+ G+ +H YV + ++ V +++DMY G
Sbjct: 510 MLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCG 569
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
+ + +F + DKD+V WN I+G+ A+++F + R+ L P + T + L
Sbjct: 570 SLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQ-GLWPTDITFIGLL 628
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKN 254
+AC+ +E G+E + + +E P + + ++D+ + G + EA L M +
Sbjct: 629 NACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPD 688
Query: 255 VICWTSMVSG 264
+ W S+++
Sbjct: 689 AVMWVSLLAA 698
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 320/592 (54%), Gaps = 14/592 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F +N + N L+ C + A +FG+I P +YN ++ A A+ G
Sbjct: 71 RVFDGMPHRNTFSYNALLSACARLGRADDALA--LFGAIPDPDQCSYNAVVAALAQHGRG 128
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+L + + + +++ A + GE+VH V K+ D Y+ ++
Sbjct: 129 GDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTAL 188
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY + +K+FD MP++++VSWN I+ + + ++A+ +F RM + +PD
Sbjct: 189 VDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKD-GFVPD 247
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELF 247
E T+ S +SAC L G+++H + + F ++ NAL+DMY KCG EA+ +F
Sbjct: 248 EVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVF 307
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D M ++V+ TSM++GY + A+ +F + +++V W +I Y + +EA+
Sbjct: 308 DRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALR 367
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH------GYINENRITVDAVVATA 361
LF ++ + P + +L CA L L+ G+ H G+ ++ D V +
Sbjct: 368 LFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNS 427
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MY K G I ++F + +D SW ++I G A NG+ AL LF +M+ +PD
Sbjct: 428 LVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPD 487
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+T IGVLSAC H GLV EGRR+F +MTE + I P +HY C+IDLLGRAG L E EELI
Sbjct: 488 SVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELI 547
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P E + + L+ +LL ACR++ N+DMGE A L +++ +S + LL+N+YA
Sbjct: 548 ENMPMEPDAV---LWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELG 604
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+W DV VR+ MK GV K PGCS IEI ++ FL D H EI+ L
Sbjct: 605 KWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTL 656
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 161/336 (47%), Gaps = 17/336 (5%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N LL Y + G L +AR +FD MP++N + +++S G+ + A LF P D
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
+ A++ Q R +A+ M + + + L+ CA A G+ +H +
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
++ D + TAL++MYAKC E+A ++F + E++ SW S+I NG +++AL
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LF +M+ G PD++T V+SAC+ EGR+ M + + + + L+D+
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDM 293
Query: 468 LGRAGLLDEAEEL-----IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
+ G EA+ + IR + +E + I G SA ++G+ A L+ +
Sbjct: 294 YAKCGRTWEAKCVFDRMAIRSVVSETSMIT----GYAKSA-------NVGDAQAVFLQMV 342
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
E +++ L+A YA + E+ + ++K V
Sbjct: 343 EKNVVAWNVLIAT-YAHNSEEEEALRLFVRLKRESV 377
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 173/377 (45%), Gaps = 68/377 (18%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF---- 177
+T++ N+++ Y LG + + +++FD MP ++ S+N +S + R +DA+ +F
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 178 ---------------RRMRQGCNL-----------MPDEGTVVSTLSACTALKNLELGKE 211
+ R G L + + + S LSAC + K G++
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQ 168
Query: 212 IHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H + + + + +G AL+DMY KC EA+++FD MP +N++ W S+++ Y G
Sbjct: 169 VHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNG- 227
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
PV DEA+ALF M PD+ L ++++
Sbjct: 228 -----------PV-------------------DEALALFVRMMKDGFVPDEVTLASVMSA 257
Query: 331 CAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
CA L A +G+ +H + +R D V+ AL++MYAKCG +A +F + + S
Sbjct: 258 CAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVS 317
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
TS+I G A + + A +F QM+ + + + + +++ +H +E R F +
Sbjct: 318 ETSMITGYAKSANVGDAQAVFLQMV----EKNVVAWNVLIATYAHNSEEEEALRLFVRLK 373
Query: 450 EVYQIQPKLEHYGCLID 466
+ P YG +++
Sbjct: 374 R-ESVWPTHYTYGNVLN 389
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 214/683 (31%), Positives = 349/683 (51%), Gaps = 95/683 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLA-------- 55
+ + A I G + N LN+L+ ++C N+ YA K+F I P ++A
Sbjct: 25 RAVHAHILTSGFKPNTFILNRLINIYC---KSSNITYARKLFDKIPKPDIVARTTLLSAY 81
Query: 56 -------------------------YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
YN +I A++ +L LF +++ G PD FT
Sbjct: 82 SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141
Query: 91 YPFVFKAVGWLG-EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK---------IC 140
+ V A+ + E + + +H V+K G V N+++ Y +
Sbjct: 142 FSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMA 201
Query: 141 NVKKLFDEMPDKDV---------------------------------VSWNVSISGHVKC 167
+ +K+FDE P + V+WN ISG+V+
Sbjct: 202 SARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRR 261
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA----LKNLELGKEIHRYINQEL--- 220
+E+A D FRRM + DE T S +SAC + + G+++H YI + +
Sbjct: 262 GLYEEAFDTFRRM-HSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEP 320
Query: 221 --EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
F + NAL+ Y K + EAR +FD+MP +++I W +++SGYVN ++E+A +F
Sbjct: 321 SHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIF 380
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
P R+++ WT MI+G Q +E + LF +M+ L+P + +T C+ LG+L+
Sbjct: 381 SEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLD 440
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ IH + ALI MY++CG++E A +F + D+ SW ++I LA
Sbjct: 441 NGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALA 500
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+G KA+ELF QM+ PD ITF+ +L+AC+H GL+ EGR +F+TM Y I P
Sbjct: 501 QHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGE 560
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA-A 517
+HY LIDLL RAG+ +A+ +I+ +P E P++ ALL+ CRI+GN+++G + A
Sbjct: 561 DHYARLIDLLCRAGMFLKAQSVIKSMPFEAG---APIWEALLAGCRIHGNMELGIQAADR 617
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
LLE I +D ++ +L+N+YA+ +W++V VR M+E GV+K PGCS +E+ ++H FL
Sbjct: 618 LLELIPGQDGTY-IILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFL 676
Query: 578 VGDPSHSEMKEIYSMLDRMAKTL 600
V D H E++ +Y+ L ++ +
Sbjct: 677 VDDARHPEVQAVYTYLQQLVNEM 699
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 341/594 (57%), Gaps = 9/594 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q KQ+ A++ + +KL+ + +H L +A +F I +YN ++ +
Sbjct: 42 QAKQLHARLILFSVTPENYLASKLVALYSKTNH--LAFARYVFDQIPHKNTFSYNAMLIS 99
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG--WLGEVKKGEKVHGYVVKTGLE 120
++ +L LFS L + +N + + K++ L +VK G++VHG+V++TG +
Sbjct: 100 YSLHNRHGDALDLFSSLASSNL-VNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFD 158
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V N+++ Y + +K+FD M +DVVSWN ISG+ + +ED ++R M
Sbjct: 159 ADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREM 218
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
P+ TVVS L AC ++L G E+H++I + ++E + NAL+ +Y KCG
Sbjct: 219 VDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGS 278
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L ARELFDEM K+ + + +++SG + G ++++ +LF + + W A+I G VQ
Sbjct: 279 LDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQN 338
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
NR + + L REMQ + +P+ L ++L+ A +L+ GK IH Y + + VA
Sbjct: 339 NRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVA 398
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TA+I+MYAK G + A +F + +++ WT+II A++G N AL LF +M+ G +
Sbjct: 399 TAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQ 458
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD +TF VL+AC+H G+VD+ F +M + Y IQP +EHY C++ LG+A L EA+E
Sbjct: 459 PDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKE 518
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+ K+P E + ++GALL I +V++G+ + L +IE +++ + ++AN+Y+
Sbjct: 519 FVSKMPIEPS---AKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQ 575
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
A RW++ VR++M ++G++K+PG S IE + + F+ D ++EI+ +L
Sbjct: 576 AGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATDTCTENVEEIHVIL 629
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 221/602 (36%), Positives = 333/602 (55%), Gaps = 61/602 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LK + AQI GL TL KL+ FC G+L YA+++F I P YN LI
Sbjct: 127 MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 186
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ ++LLF ++ G+SP+ FT PFV KA G + VHG +K G+
Sbjct: 187 RGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIG 246
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN--VSISGHVKCMRFEDAVDVFR 178
+V N+++ +Y V G I +KLFD++ DK +VSWN + I+G VK +D+
Sbjct: 247 SLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITG-VK-------IDIIV 298
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
R N + D L + A+ ++ E + +++ Y + G
Sbjct: 299 R-----NALXDMYAKCGNLHSAQAI------------FDRTQEKNVVSWTSMISAYAQHG 341
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ AR++FD+MP KNV+ W SM+S Y+ GQ +A DLF++
Sbjct: 342 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNK------------------ 383
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
M+ R+ PD+ LV++L C+QLG L GK IH YI N+ +
Sbjct: 384 -------------MRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTL 430
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+LI+MYAKCG + AL+IF E+ K+ SW II LA++G +A++LF +M + G
Sbjct: 431 YNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGT 490
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD+IT G+LSACSH GLVD G +F+ M +Y++ ++EHY C++DLLGR GLL EA
Sbjct: 491 LPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACMVDLLGRGGLLGEAI 550
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
ELI ++P + + ++ +GALL ACRI+GNV++G+++ L ++E + L++NIY
Sbjct: 551 ELIGRMPMKPDVVV---WGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYW 607
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
A RWEDV +R+ M + G++K SSIEI+G I+EF+V D H IY+MLD++
Sbjct: 608 EAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTD 667
Query: 599 TL 600
L
Sbjct: 668 HL 669
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 327/600 (54%), Gaps = 44/600 (7%)
Query: 5 KQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
K + + I G + + L K+ C G+ ++F + + L+A+N +I
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKC-----GSYKDCRQVFEKLVNRDLIAWNTMIG 419
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A+ G++ ++ ++ +++ G+ P+ TY + A + G ++H VVK G F
Sbjct: 420 GLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMF 479
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D V N+++ MY G I + + LF++M KD++SW I G K +A+ VF+ M+
Sbjct: 480 DISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQ 539
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCL 240
Q L P+ T S L+AC++ L+ G+ IH+ I L + N L++MY
Sbjct: 540 QA-GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMY------ 592
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
SM CG ++ AR +FDR RDIV + AMI GY N
Sbjct: 593 -------------------SM------CGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHN 627
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LF +Q LKPDK + +L CA G+LE K IH + ++ D +
Sbjct: 628 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGN 687
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL+ YAKCG AL +F ++ +++ SW +II G A +G+ L+LF +M G KP
Sbjct: 688 ALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKP 747
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D +TF+ +LSACSH GL++EGRR+F +M+ + I P +EHYGC++DLLGRAG LDE E L
Sbjct: 748 DIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEAL 807
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+ +P + N I +GALL ACRI+GNV + E+ A K++ +++ + L+++YA+A
Sbjct: 808 IKTMPFQANTRI---WGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAA 864
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W+ +R+ M++ GV K PG S IE+ +H F+ D SH E ++IY+ LD++ +
Sbjct: 865 GMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAM 924
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 253/491 (51%), Gaps = 45/491 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A ++F +++ ++++ ++I +A G + +F K+++ GV P+ TY V
Sbjct: 293 GSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVL 352
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +K G+ VH +++ G E D V +++ MY G + +++F+++ ++D++
Sbjct: 353 NAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLI 412
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH- 213
+WN I G + +E+A +++ +M R+G +MP++ T V L+AC L G+EIH
Sbjct: 413 AWNTMIGGLAEGGNWEEASEIYHQMQREG--MMPNKITYVILLNACVNPTALHWGREIHS 470
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
R + F + NAL+ MY +CG + +AR LF++M K++I WT+M+ G G
Sbjct: 471 RVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGA- 529
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
EA+A+F++MQ LKP++ ++L C+
Sbjct: 530 ------------------------------EALAVFQDMQQAGLKPNRVTYTSILNACSS 559
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
AL+ G+ IH + E + DA VA L+ MY+ CG ++ A ++F + ++D ++ ++
Sbjct: 560 PAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAM 619
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN-TMTEVY 452
I G A + +AL+LF ++ G KPD +T+I +L+AC++ G ++ + + + + Y
Sbjct: 620 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGY 679
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
L + L+ + G +A + K+ N V + A++ C +G G
Sbjct: 680 LSDTSLGN--ALVSTYAKCGSFSDALLVFDKMMKRN----VISWNAIIGGCAQHGR---G 730
Query: 513 EKLAALLEKIE 523
+ + L E+++
Sbjct: 731 QDVLQLFERMK 741
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 136/583 (23%), Positives = 263/583 (45%), Gaps = 85/583 (14%)
Query: 71 KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
+++ + L+++G ++ Y + K + ++ G +VH ++++ D Y N+++
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183
Query: 131 DMYGVLGKICNVKKLFDEM--PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
+MY G I +++++++ ++ V SWN + G+V+ E+A+ + R M+Q L
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQH-GLAL 242
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
T + LS+C + LE G+EIH + L F + N +L+MY KC
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKC---------- 292
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
G + +AR++FD+ + +V WT +I GY + A
Sbjct: 293 ---------------------GSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFE 331
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
+F++MQ + P++ + +L + AL+ GK +H +I D V TAL++MYA
Sbjct: 332 IFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYA 391
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG + ++F +L +D +W ++I GLA G +A E++ QM G P+ IT++
Sbjct: 392 KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVI 451
Query: 428 VLSACS-----------HGGLVDEGRRF----FNTMTEVYQ---------------IQPK 457
+L+AC H +V +G F N + +Y ++
Sbjct: 452 LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKD 511
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL-A 516
+ + +I L ++GL EA + + + + Y ++L+AC +D G ++
Sbjct: 512 IISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
++E + D+ L N+Y+ +D V +M + + + N +I
Sbjct: 572 QVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI--------VAYNAMIG-- 621
Query: 577 LVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDNLVAINFL 619
G +H+ KE + DR+ ++ ++ D + IN L
Sbjct: 622 --GYAAHNLGKEALKLFDRL-------QEEGLKPDKVTYINML 655
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
D A+ + + +Q + + + +L C ++ L G+ +H +I ++ +D AL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 363 IEMYAKCGLIEKALEIFYELR--EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
I MY +CG IE+A +++ +L E+ SW +++ G G I +AL+L +M G
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
T + +LS+C ++ GR + ++ + C++++ + G + EA E+
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKA-RLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 481 IRKIPNEN 488
K+ ++
Sbjct: 302 FDKMETKS 309
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 179/459 (38%), Positives = 284/459 (61%), Gaps = 5/459 (1%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR-MRQGCNLMPDEGTVVSTLSACTA 202
++ D + + N I H K E + D +RR + G +L PD TV + ACT
Sbjct: 61 QILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTG 120
Query: 203 LKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L+ E G ++H I + + P + L+ +Y + GCL ++F+ +P + +C T+M
Sbjct: 121 LRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAM 180
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
V+ CG + AR LF+ P RD + W AMI+GY Q EA+ +F MQ+ +K +
Sbjct: 181 VTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
++++L+ C QLGAL+QG+W H YI N+I + +AT L+++YAKCG +EKA+E+F+
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ EK+ +W+S + GLAMNG K LELFS M G P+ +TF+ VL CS G VDEG
Sbjct: 301 MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
+R F++M + I+P+LEHYGCL+DL RAG L++A +I+++P + + + + +LL
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAV---WSSLLH 417
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
A R+Y N+++G + + ++E+ + + LL+NIYA +N W++V++VRQ MK GVRK
Sbjct: 418 ASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PGCS +E+NG +HEF VGD SH + +I ++ +++ L
Sbjct: 478 PGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRL 516
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 200/429 (46%), Gaps = 70/429 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+++QI A+++ G ++ + + H L YA +I + P L A N +I+A
Sbjct: 21 EVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRA 80
Query: 63 FAKKGSFRKSLLLFSKLRERG--VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K KS + ++ G + PDN+T F+ +A L + G +VHG ++ G +
Sbjct: 81 HCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFD 140
Query: 121 FDTYVCNSIMDMYGVLG------KICN-------------------------VKKLFDEM 149
D +V ++ +Y LG K+ N +KLF+ M
Sbjct: 141 NDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGM 200
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
P++D ++WN ISG+ + +A++VF M+ +G + + ++S LSACT L L+
Sbjct: 201 PERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV--NGVAMISVLSACTQLGALDQ 258
Query: 209 GKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+ H YI + +++ T + L+D+Y KCG + +A E+F M KNV W+S ++G
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA- 317
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+NG+ + + + LF M+ + P+ V++
Sbjct: 318 -------------------------MNGFGE-----KCLELFSLMKQDGVTPNAVTFVSV 347
Query: 328 LTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK- 385
L GC+ +G +++G + NE I L+++YA+ G +E A+ I ++ K
Sbjct: 348 LRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKP 407
Query: 386 DAASWTSII 394
AA W+S++
Sbjct: 408 HAAVWSSLL 416
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 214/662 (32%), Positives = 346/662 (52%), Gaps = 78/662 (11%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
QL+Q + L + ++ L++ CT H + Y + IF S SP Y+ ++K
Sbjct: 16 QLRQFHGHLVHNSLHSHNYWVSLLLINCTRL-HAHPAYVDSIFTSSPSPDASVYSCMLKY 74
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+++ G+ + + LF + P F Y ++ K G K G H YV+K G D
Sbjct: 75 YSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNMFHAYVLKLGHIDD 129
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDE-------------------------------MPD 151
++ N+I+DMY G++ + LF++ MP
Sbjct: 130 HFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA 189
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRM---------------------RQGCNL---M 187
+++++W ++G+ K E A F M ++ NL M
Sbjct: 190 RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM 249
Query: 188 PDEG------TVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+EG T V T+S+C+++ + L I R I+Q+ + + ALLDM+ K G L
Sbjct: 250 LEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNL 309
Query: 241 SEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
AR +FDE+ +N + W M+S Y G+L AR+LFD P RD+V W +MI GY Q
Sbjct: 310 EIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369
Query: 300 NRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
++ LF+EM + ++PD+ + ++L+ C +GAL+ W+ + E I +
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISG 429
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+LI MY+KCG + A IF + +D S+ ++I G A NG +A++L M G
Sbjct: 430 FNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PD +T+IGVL+ACSH GL++EG+ F ++ P ++HY C++DLLGRAG LDEA+
Sbjct: 490 EPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAK 544
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
LI+ +P + + +YG+LL+A RI+ V +GE A+ L ++E ++ + LL+NIYA
Sbjct: 545 MLIQSMPMKPH---AGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYA 601
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
S RWEDV VR+ MK+ G++K G S +E G +H+F VGD SH + K+IY +L + +
Sbjct: 602 SFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELER 661
Query: 599 TL 600
+
Sbjct: 662 KM 663
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 316/558 (56%), Gaps = 48/558 (8%)
Query: 40 YAEKIFGSIQ---SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
+A+ +F + S +N L++ A S R+SLL FS++R V+PD +T+P V K
Sbjct: 66 HADSVFAHLAEEASRHAFPWNTLVRLHAA-ASPRRSLLYFSRMRRVAVAPDAYTFPAVLK 124
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A G + G VHG V+TGL+ D + N+++ Y +G + +K+FD +D+VS
Sbjct: 125 ACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGV-RDLVS 183
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN ++G+V C + A D+F MRQ S T
Sbjct: 184 WNSMVAGYVGCGEVDLAQDLFDEMRQ-----------RDAFSWAT--------------- 217
Query: 217 NQELEFTPIMGNALLDMYCK-CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
++D Y + G + ARELFD+MP+++++CW SM+ GY G++++AR
Sbjct: 218 -------------MIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEAR 264
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
LF+ P R+++ W+ +I+GYV+F +EA+ F+ M +KPD+ V + CAQLG
Sbjct: 265 VLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLSCGIKPDRVAAVGAVAACAQLG 324
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
ALEQG+W+H Y+ + ++ D VV TALI+MY KCG ++ A IF + +K +W +I
Sbjct: 325 ALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIV 384
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
GL +G A++LF+QM + A DD++ + VL++C+H GLV EG F M + ++
Sbjct: 385 GLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTSCTHAGLVSEGLGIFYRMEKDLGLE 444
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
PK+EHYG LIDLLGRAG +D+A I +P E L+G+LL++CR + V++ E
Sbjct: 445 PKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTP---ELWGSLLASCRSHRCVELAELS 501
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
L + + DS + LL+NIYA W+DV +R+ M G++K G S IE++G IHE
Sbjct: 502 VERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQIHE 561
Query: 576 FLVGDPSHSEMKEIYSML 593
F+ G SH +EIY L
Sbjct: 562 FVNGGSSHPHKEEIYLTL 579
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
HG + A +F + +++++++I + + G ++L F ++ G+ PD
Sbjct: 257 HGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLSCGIKPDRVAAVGA 316
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG +++G +H Y+ K + FD V +++DMY G++ K +F+ MP K V
Sbjct: 317 VAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSV 376
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
V+WNV I G DA+ +F +M M D+ +V++ L++CT + G I
Sbjct: 377 VTWNVMIVGLGTHGYGLDAIKLFNQMETERAPM-DDLSVLAVLTSCTHAGLVSEGLGIFY 435
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
+ ++L P + + AL+D+ + G + +AR + MP
Sbjct: 436 RMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMP 474
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 193/506 (38%), Positives = 302/506 (59%), Gaps = 13/506 (2%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV--KKLFDEMPDKDVVSWNVS 160
+ + ++VH ++ + GLE +V ++ L + + +F ++ + W
Sbjct: 51 HINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTAL 110
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I G+ F ++V ++ MR+ + P T + L AC+A ++ LG+++H
Sbjct: 111 IRGYALQGPFMESVLLYNSMRRQ-GIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIG 169
Query: 221 EFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
F +GN L+DMY KCGCL +FDEM +++VI WTS++ Y G +E A +LF
Sbjct: 170 GFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELF 229
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
D P++D+V WTAM+ GY Q R EA+ +F MQ +K D+ LV +++ CAQLGA +
Sbjct: 230 DGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAK 289
Query: 339 QGKWIHGYINENRI--TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
W+ ++ T + VV +ALI+MYAKCG +E A ++F + E++ S++S+I G
Sbjct: 290 YANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVG 349
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
AM+G A+ELF +M+ KP+ +TFIGVL+ACSH G+V++G++ F M E + + P
Sbjct: 350 FAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAP 409
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIP-NENNEIIVPLYGALLSACRIYGNVDMGEKL 515
+HY C++DLLGRAG L+EA L++ +P N + + +GALL ACRI+GN DM +
Sbjct: 410 SEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGV----WGALLGACRIHGNPDMAQIA 465
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE-INGIIH 574
A+ L ++E + LL+NIYASA RW+DV+ VR+ M+ G++K PGCS +E GIIH
Sbjct: 466 ASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIH 525
Query: 575 EFLVGDPSHSEMKEIYSMLDRMAKTL 600
EF GD SH + +EI L+ + L
Sbjct: 526 EFFAGDMSHPKSREIKQALEDLLDRL 551
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 199/415 (47%), Gaps = 70/415 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+KQ+ A IF+ GL+Q L KL+ T Y +F ++ P + LI
Sbjct: 52 INQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALI 111
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT-GL 119
+ +A +G F +S+LL++ +R +G+ P +FT+ + KA +V G +VH + G
Sbjct: 112 RGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGF 171
Query: 120 EFDTYVCNSIMDMY---GVLG-------------------------KICNVK---KLFDE 148
D YV N+++DMY G LG K+ N++ +LFD
Sbjct: 172 GSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDG 231
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KD+V+W ++G+ + R +A++VF RM Q + DE T+V +SAC L +
Sbjct: 232 LPMKDMVAWTAMVTGYAQNARPREALEVFERM-QAAGVKTDEVTLVGVISACAQLGAAKY 290
Query: 209 GKEIHRYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+ R + ++ F P ++G+AL+DMY KCG + +A ++F+ M +NV ++SM+ G
Sbjct: 291 ANWV-RDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVG 349
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
+ G A +LFD EM +KP++
Sbjct: 350 FAMHGLAGAAMELFD-------------------------------EMLKTEIKPNRVTF 378
Query: 325 VALLTGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEI 378
+ +LT C+ G +EQG+ + + E + + ++++ + G +E+AL +
Sbjct: 379 IGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNL 433
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 335/598 (56%), Gaps = 35/598 (5%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNL------LYAEKIFGSIQ----S 50
+ + QI +++ G NP ++++ + SH L L+ + FG +
Sbjct: 83 LHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDN 142
Query: 51 PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
P L +N +IK+F+ ++ +F+ + E GV D F++ V KA LG +K+G ++
Sbjct: 143 PFL--WNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQI 200
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
HG + + D ++ N +M +Y G + ++LFD M +D VS+N I G+VK
Sbjct: 201 HGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMV 260
Query: 171 EDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG-N 228
+ A ++F ++MP ++ ++S S + E G + + +E+ ++ N
Sbjct: 261 KSARELF-------DVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWN 313
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+++D KCG + A LF+ MP ++V+ W +MV GY G+++ AR LFD P RD++
Sbjct: 314 SMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVIS 373
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
AM+ GYVQ EA+ F +M + L P L+ L+ AQLG ++G +H YI
Sbjct: 374 CNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYI 433
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+N ++ + ALI+MYAKCG I+ AL W +IJ GLA++G A
Sbjct: 434 EDNGFSLSEKLGXALIDMYAKCGSIDNAL----------IDHWNAIJXGLAIHGLGEVAF 483
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
ELF +M KPBDITFIGVL+AC+H GLV EG F M V++++PKL+HYGC++D+
Sbjct: 484 ELFMEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVDI 543
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG ++E ++ + K+P E N+++ + LLSACR + N +GE +A L ++S +
Sbjct: 544 LGRAGHVEEXKKFVEKMPIEPNDVV---WRTLLSACRNHENFTIGEPVAKHLISVDSYNP 600
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSE 585
S + LL+NIYA W DV +R MK+ ++K+PGCS IE+ G +HEF V D SH +
Sbjct: 601 SSYVLLSNIYAXFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQ 658
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/531 (37%), Positives = 303/531 (57%), Gaps = 43/531 (8%)
Query: 103 EVKKGEKVHGYV-VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
++K +K+H + + L + + +M Y V G+ + + +FDE+P K+VV +NV I
Sbjct: 1039 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 1098
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-EL 220
+V + DA+ VF+ M G + PD T L A + ++L +G +IH + + L
Sbjct: 1099 RSYVNNHLYSDALLVFKNM-AGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 1157
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA------ 274
+ +GN L+ MY KCGCL EA + DZMP ++V+ W S+V+G GQ + A
Sbjct: 1158 DLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 1217
Query: 275 -------------------------------RDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+++F + + +V W MI Y+ +
Sbjct: 1218 MELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPA 1277
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EAV +F +M+ + PD + ++L C L AL G+ IH Y+ R+ + ++ ALI
Sbjct: 1278 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALI 1337
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MYAKCG +E A E+F +++ +D SWTS+I MNGK A+ LFS+M G PD I
Sbjct: 1338 DMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSI 1397
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
F+ VLSACSH GL+DEGR +F MTE +I P++EH+ C++DLLGRAG +DEA I++
Sbjct: 1398 AFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQ 1457
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P E NE + +GALLSACR+Y N+ +G A L ++ + S ++ LL+NIYA A RW
Sbjct: 1458 MPMEPNERV---WGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRW 1514
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
EDVT VR MK G++K+PG S+ E++ +H FL GD SH + K+IY LD
Sbjct: 1515 EDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELD 1565
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 243/534 (45%), Gaps = 87/534 (16%)
Query: 4 LKQIQAQI-FQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
LK++ ++I L NP KLM C P IF I ++ +N++
Sbjct: 1043 LKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEP-----WSTRHIFDEIPKKNVVFFNVM 1097
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+++ + +LL+F + G+ PD++TYP V KA ++ G ++H VV+ GL
Sbjct: 1098 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 1157
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ + +V N ++ MYG G + ++ DZMP +DVVSWN ++G + +F+DA++V +
Sbjct: 1158 DLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 1217
Query: 180 MRQGCNLMPDEGTVVSTLSAC--TALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCK 236
M + L PD GT+ S L A T L N+ KE+ + N+ L + N ++ +Y
Sbjct: 1218 M-ELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSL----VSWNVMIAVYMN 1272
Query: 237 CGCLSEARELFDEMPNK---------------------------------------NVIC 257
+EA ++F +M + N++
Sbjct: 1273 NSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLL 1332
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
+++ Y CG LE AR++FD+ RD+V WT+MI+ Y + +AV+LF MQ + L
Sbjct: 1333 ENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGL 1392
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKAL 376
PD V++L+ C+ G L++G++ + E +I ++++ + G +++A
Sbjct: 1393 NPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAY 1452
Query: 377 EIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
++ E + W G + A ++S MI IG+L+A
Sbjct: 1453 GFIKQMPMEPNERVW----------GALLSACRVYSNMI-----------IGLLAADQLF 1491
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
L E ++ ++ +Y + E + ++ G I+K+P +N
Sbjct: 1492 QLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKG--------IKKMPGVSN 1537
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/650 (31%), Positives = 333/650 (51%), Gaps = 88/650 (13%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKS--LLLFSKLRERGVSPDNF 89
H + G+L A +F I SP + YN LI+A++ + L L+ ++ V+P+N+
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+PF KA L + G +H + + GL+ D +V +++DMY + + +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
P +D+V+WN ++G+ + AV M+ Q L P+ T+V+ L L
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 209 GKEIHRYI---------NQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
G +H Y N + + T ++G ALLDMY KCG L AR +FD MP +N +
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 258 WTSMVSGYVNCGQLEKARDLFDR---------SPVR------------------------ 284
W++++ G+V C ++ +A LF SP
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366
Query: 285 -------DIVLWTAMINGYVQFNRFDEAVALFRE-------------------------- 311
D+ ++++ Y + D+A+ALF E
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 312 -----MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
MQ ++PD +V+L+ C+ L AL+ G+ HG + + + + ALI+MY
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKCG I+ + ++F + +D SW ++I G ++G +A LF +M + G PD +TFI
Sbjct: 487 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 546
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
+LSACSH GLV EG+ +F+ M Y + P++EHY C++DLL R G LDEA E I+ +P
Sbjct: 547 CLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPL 606
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
+ V ++ ALL ACR+Y N+D+G+K++ +++++ + + LL+NIY++A R+++
Sbjct: 607 RAD---VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663
Query: 547 TNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
VR K G +K PGCS IEING +H F+ GD SH + EIY LD +
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNI 713
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/523 (37%), Positives = 302/523 (57%), Gaps = 33/523 (6%)
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD 147
NF PF + +VH ++KT SI+ + V G +C F
Sbjct: 37 NFNSPFELR------------QVHAQIIKTNAPL------SILPLTRV-GLVCAFTPSFH 77
Query: 148 ---------EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
E + WN + + DA+ +F R+RQ ++ PD T S L
Sbjct: 78 YAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQ-YDVCPDTFTCSSVLR 136
Query: 199 ACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC L +L G+ +H + + + N ++ +Y CG + EAR LF++MP ++V+
Sbjct: 137 ACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVT 196
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W M++ + G E A DLF R P R++ WT+MI GYVQ + EA+ LF +M+ +
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGV 256
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
K ++ +VA+L CA LGAL+ G IH Y N + + ++ LI+MY KCG +E+A +
Sbjct: 257 KCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACK 316
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F E+ E+ SW+++I GLAM+G+ +AL LFS M G +P+ +TFIG+L ACSH GL
Sbjct: 317 VFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGL 376
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
+ EGRRFF +MT Y I P++EHYGC++DLL RAGLL EA E I +P + N ++ +G
Sbjct: 377 ISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVV---WG 433
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
ALL ACR++ NV+M E+ L +++ + ++ +L+NIYA A RWED VR+ MK+
Sbjct: 434 ALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQ 493
Query: 558 VRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
V+K PG SSI ++G++HEF+ G+ SH + ++I+ + + + +
Sbjct: 494 VKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEM 536
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 211/452 (46%), Gaps = 78/452 (17%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTH-PSHGNLLYAEKIFGSI--QSPCLLAYNLL 59
+L+Q+ AQI + + L ++ + C PS YA++IF + Q P +N
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPS---FHYAQQIFKCVEKQKPETFVWNSC 99
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+KA A+ S +++LF +LR+ V PD FT V +A L ++ G +HG V K G
Sbjct: 100 LKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 159
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV-------------------- 159
+ Y+ N I+ +Y G++ + LF++MP +DVV+WN+
Sbjct: 160 RSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSR 219
Query: 160 -----------SISGHVKCMRFEDAVDVFRRMRQG---CNLMPDEGTVVSTLSACTALKN 205
I+G+V+C + ++A+ +F +M + CN E TVV+ L+AC L
Sbjct: 220 MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCN----EVTVVAVLAACADLGA 275
Query: 206 LELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
L+LG IH Y N+ + + N L+DMY KCGCL EA ++F+EM + V+ W++M+ G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
G R +EA+ LF +M + ++P+
Sbjct: 336 LAMHG-------------------------------RAEEALRLFSDMSQVGIEPNGVTF 364
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELR 383
+ LL C+ +G + +G+ + + + + ++++ ++ GL+ +A E +
Sbjct: 365 IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424
Query: 384 EK-DAASWTSIICGLAMNGKINKALELFSQMI 414
K + W +++ ++ + A E ++
Sbjct: 425 MKPNGVVWGALLGACRVHKNVEMAEEAIKHLL 456
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/601 (35%), Positives = 333/601 (55%), Gaps = 39/601 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L Q+ Q+ GL + + K + C H G++ YA K F + P +L +N +I
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACLH--FGDVNYAHKAFREVSEPDILLWNAII 72
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K + +K + ++ ++ V P+ FT+ +V KA G G+++HG K G
Sbjct: 73 KGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG 132
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ +V NS++ MY G+I + +FD++ D+ VVSW ISG+V+ +A++VF+ M
Sbjct: 133 SNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM 192
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
RQ CN+ PD +VS ++A T +++L GK IH + + LEF P + +L MY K G
Sbjct: 193 RQ-CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGL 251
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ E AR F+R +++LW AMI+GY
Sbjct: 252 V-------------------------------EVARFFFNRMEKPNLILWNAMISGYANN 280
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+EA+ LFREM ++ D + + + AQ+G+LE +W+ GYI+++ D V
Sbjct: 281 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVN 340
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
T LI+MYAKCG I A +F + +KD W+ +I G ++G +A+ L+++M G
Sbjct: 341 TGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 400
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+D TFIG+L+AC + GLV EG F+ M + + I+P +HY C++DLLGRAG L++A +
Sbjct: 401 PNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYD 459
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
I +P + V ++GALLSAC+I+ V +GE A L ++ ++ + L+N+YAS
Sbjct: 460 FIMSMPIKPG---VSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYAS 516
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
A+ W V NVR M + G+ K G SSIEING + F VGD SH + KEI+ LDR+ K
Sbjct: 517 AHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKR 576
Query: 600 L 600
L
Sbjct: 577 L 577
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 214/613 (34%), Positives = 335/613 (54%), Gaps = 54/613 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q ++I +GL QN KL+ C HP H L +F S+Q + +N LI
Sbjct: 43 RQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRL-----VFDSLQHKNVFLWNSLIN 97
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+AK + ++ LF+++ V PD+FT + K LG + G+ +HG ++ G
Sbjct: 98 GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVS 157
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV---KCMRFEDAVDVFR 178
DT V NSIM MY G +K+FDEM ++ SWNV I+G+ C E+ + +
Sbjct: 158 DTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALK-NLELGKEIHRYINQE-----LEFTPIMGNALLD 232
+M+ + PD T+ S L C K + G+E+H YI + L+ +G L+D
Sbjct: 218 QMQMD-EVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLID 276
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY + NK V+ R +FDR R++ WTAM
Sbjct: 277 MYSR--------------SNKVVV-----------------GRRVFDRMKCRNVFSWTAM 305
Query: 293 INGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
INGYV+ DEA++LFR+MQ+I ++P++ LV++L C+ L G+ IHG+
Sbjct: 306 INGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKE 365
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELRE-KDAASWTSIICGLAMNGKINKALELF 410
+ + + ALI+MY+KCG ++ A +F + KDA SW+S+I G ++GK +A+ L+
Sbjct: 366 LNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLY 425
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M+ G +PD IT +G+LSACS GLV+EG ++++ Y I+P LE + C++D+LGR
Sbjct: 426 DKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGR 485
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
AG LD A + I+ +P E + +GAL+S I+G+++M E L ++E ++ S +
Sbjct: 486 AGQLDPALDFIKAMPVEPGPSV---WGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNY 542
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
++N+YAS+ RW+ V VR+ MK+ +RKVPGCS I IN H F V D +H IY
Sbjct: 543 VSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIY 602
Query: 591 SMLDRMAKTLLDS 603
+MLD + T+ D+
Sbjct: 603 NMLDDLLLTMNDA 615
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 181/385 (47%), Gaps = 37/385 (9%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+K + H ++ GL ++ + ++ Y + + + +FD + K+V WN I+
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELE 221
G+ K + +A +F +M +++PD+ T+ + + L L GK IH + I
Sbjct: 98 GYAKNRLYNEAFQLFNQMCSS-DVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFV 156
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
++ N+++ MYCKCG E+R++FDEM +N W +++GY
Sbjct: 157 SDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYA--------------- 201
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC-AQLGALEQG 340
++G F +E ++MQ+ ++PD + + +LL C G + G
Sbjct: 202 -----------VSGNCNFR--EETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYG 248
Query: 341 KWIHGYINENRITV----DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ +H YI +N + + D + LI+MY++ + +F ++ ++ SWT++I G
Sbjct: 249 RELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMING 308
Query: 397 LAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
NG ++AL LF M + G +P+ ++ + VL ACS + GR+ ++
Sbjct: 309 YVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVR-KELN 367
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEEL 480
++ LID+ + G LD A +
Sbjct: 368 NEVSLCNALIDMYSKCGSLDSARRV 392
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/601 (34%), Positives = 330/601 (54%), Gaps = 48/601 (7%)
Query: 6 QIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ + +F+ G+ + +L L V C G++ A IF S ++ +NL++ A
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKC-----GDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
F + KS LF +++ G+ P+ FTYP + + E+ GE++H VKTG E D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
YV ++DMY G + +++ + + +KDVVSW I+G+V+ +DA+ F+ M Q
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM-Q 438
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLS 241
C + PD + S +S C + + G +IH I + + NAL+++Y +CG +
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIR 498
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
EA F+E+ +K+ I W +VSG+ G E
Sbjct: 499 EAFSSFEEIEHKDEITWNGLVSGFAQSGLHE----------------------------- 529
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
EA+ +F M +K + F V+ L+ A L ++QGK IH + + + + V A
Sbjct: 530 --EALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI +Y KCG E A F E+ E++ SW +II + +G+ +AL+LF QM G KP+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
D+TFIGVL+ACSH GLV+EG +F +M++ Y I+P+ +HY C+ID+ GRAG LD A++ I
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
++P + ++ + LLSAC+++ N+++GE A L ++E DS+ + LL+N YA
Sbjct: 708 EEMPIAADAMV---WRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTE 764
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML----DRMA 597
+W + VR+ M++ GVRK PG S IE+ ++H F VGD H ++IY+ L DR+A
Sbjct: 765 KWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVA 824
Query: 598 K 598
K
Sbjct: 825 K 825
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 239/520 (45%), Gaps = 57/520 (10%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ +G +L A ++F + + +++ ++ +A+ G ++L L+ ++ GV P +
Sbjct: 87 YSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVL 146
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V + +G +H K G + +V N+++ +Y G +++F +MP
Sbjct: 147 SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH 206
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+D V++N ISGH +C E A+++F M Q L PD T+ S L+AC +L +L+ G +
Sbjct: 207 RDTVTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 212 IHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H Y+ + + IM +LLD+Y V CG
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLY-------------------------------VKCGD 294
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+E A +F+ S ++VLW M+ + Q N ++ LF +MQ ++P++F +L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C ++ G+ IH + D V+ LI+MY+K G +EKA + L+EKD SW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
TS+I G + AL F +M G PD+I +S C+ N M +
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG----------INAMRQ 464
Query: 451 VYQIQPKLEHYG---------CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
QI ++ G L++L R G + EA +I ++ +EI + L+S
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHK-DEIT---WNGLVS 520
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
G + K+ +++ K + F T ++ + ASAN
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVF-TFVSALSASAN 559
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 188/381 (49%), Gaps = 34/381 (8%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H V GL V N ++D+Y G + +++F+E+ +D VSW +SG+ +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MG 227
E+A+ ++R+M + ++P + S LS+CT + G+ IH + + I +G
Sbjct: 123 LGEEALGLYRQMHRA-GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG 181
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NA++ +Y +CG A +F +MP+++ + + +++SG+ CG E A ++F+
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE-------- 233
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
EMQ L PD + +LL CA LG L++G +H Y+
Sbjct: 234 -----------------------EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYL 270
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ I+ D ++ +L+++Y KCG +E AL IF + W ++ + K+
Sbjct: 271 FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSF 330
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
ELF QM + G +P+ T+ +L C+ +D G + ++++ + + G LID+
Sbjct: 331 ELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDM 389
Query: 468 LGRAGLLDEAEELIRKIPNEN 488
+ G L++A ++ + ++
Sbjct: 390 YSKYGWLEKARRVLEMLKEKD 410
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 40/326 (12%)
Query: 179 RMRQGCNLMPDEGTVVSTLSACTAL-KNLELGKEIH-RYINQELEFTPIMGNALLDMYCK 236
+ RQ L P + L AC + ++ EIH + + + L I+GN L+D+Y K
Sbjct: 32 KARQHGGLGPLD--FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSK 89
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G + AR +F+E+ ++ + W +M+SGY G E
Sbjct: 90 NGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE------------------------ 125
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
EA+ L+R+M + P ++L ++L+ C + QG+ IH ++ +
Sbjct: 126 -------EALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V A+I +Y +CG A +F ++ +D ++ ++I G A G ALE+F +M
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD +T +L+AC+ G + +G + + + + I G L+DL + G ++
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVET 297
Query: 477 AEELIRKIPNENNEIIVPLYGALLSA 502
A L+ I N ++ V L+ +L A
Sbjct: 298 A--LV--IFNSSDRTNVVLWNLMLVA 319
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/650 (31%), Positives = 333/650 (51%), Gaps = 88/650 (13%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKS--LLLFSKLRERGVSPDNF 89
H + G+L A +F I SP + YN LI+A++ + L L+ ++ V+P+N+
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+PF KA L + G +H + + GL+ D +V +++DMY + + +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
P +D+V+WN ++G+ + AV M+ Q L P+ T+V+ L L
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 209 GKEIHRY---------INQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
G +H Y N + + T ++G ALLDMY KCG L AR +FD MP +N +
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 258 WTSMVSGYVNCGQLEKARDLFDR---------SPVR------------------------ 284
W++++ G+V C ++ +A LF SP
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366
Query: 285 -------DIVLWTAMINGYVQFNRFDEAVALFRE-------------------------- 311
D+ ++++ Y + D+A+ALF E
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 312 -----MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
MQ ++PD +V+L+ C+ L AL+ G+ HG + + + + ALI+MY
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKCG I+ + ++F + +D SW ++I G ++G +A LF +M + G PD +TFI
Sbjct: 487 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 546
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
+LSACSH GLV EG+ +F+ M Y + P++EHY C++DLL R G LDEA E I+ +P
Sbjct: 547 CLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPL 606
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
+ V ++ ALL ACR+Y N+D+G+K++ +++++ + + LL+NIY++A R+++
Sbjct: 607 RAD---VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663
Query: 547 TNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
VR K G +K PGCS IEING +H F+ GD SH + EIY LD +
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNI 713
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/509 (35%), Positives = 312/509 (61%), Gaps = 13/509 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+K+H ++VK L +++ ++D+ + LF + D + +N I +
Sbjct: 31 KKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKHN 90
Query: 168 MRFEDAVDVFRRM---RQGCN-LMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEF 222
+ A+ V+++M G N + PD+ T + +C L +LGK++H ++ + +
Sbjct: 91 KVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKS 150
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
++ N+L++MY KC L +A ++F+EM ++ + W +++SG+V GQ+ +AR +F+
Sbjct: 151 NTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQ 210
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+ I WTA+++GY + + +A+ FR MQ++ ++PD+ LV++L CAQLGALE GKW
Sbjct: 211 DKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKW 270
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH Y ++ + V ALIEMYAKCG I++ +F ++ E+D SW+++I GLA +G+
Sbjct: 271 IHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGR 330
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
++A+ELF +M +P+ ITF+G+LSAC+H GL++EG R+F +M Y I+P +EHYG
Sbjct: 331 AHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYG 390
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
CL++LLG +G LD+A ELI+K+P + + I +G+LLS+CR + N+++ L ++
Sbjct: 391 CLVNLLGLSGRLDQALELIKKMPMKPDSAI---WGSLLSSCRSHSNLEIAVIAMEHLLEL 447
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E D+ + LL+N+YA +W+ V+ +R+ M+ ++K PGCSSIE++ ++ EF GD S
Sbjct: 448 EPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDS 507
Query: 583 HSEMKEIYSMLDRMAKTLLDSKQNAMEGD 611
K IY +L LL Q M+ D
Sbjct: 508 KPFSKAIYRVL-----KLLVMHQRRMDDD 531
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 210/433 (48%), Gaps = 73/433 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LK+I A I + L Q+ + K++ C H H YA +F + P YN +I
Sbjct: 27 IVELKKIHAHIVKFSLSQSSFLVTKMVDVCNH--HAETEYANLLFKRVADPNAFLYNAMI 84
Query: 61 KAFAKKGSFRKSLLLFSKLR-----ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+A+ + ++ ++ ++ E + PD FT+PFV K+ L G++VHG+V
Sbjct: 85 RAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVF 144
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR---- 169
K G + +T V NS+++MY + + K+F+EM ++D VSWN ISGHV+ MR
Sbjct: 145 KFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARA 204
Query: 170 -------------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+ DA++ FRRM Q + PDE ++VS L AC L
Sbjct: 205 IFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRM-QMVGIEPDEISLVSVLPACAQLG 263
Query: 205 NLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
LELGK IH Y ++ I + NAL++MY KCG + E R LFD+M ++VI W++M+
Sbjct: 264 ALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIV 323
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G N G R EA+ LF+EMQ +++P+
Sbjct: 324 GLANHG-------------------------------RAHEAIELFQEMQKAKIEPNIIT 352
Query: 324 LVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
V LL+ CA G L +G ++ + I L+ + G +++ALE+ ++
Sbjct: 353 FVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKM 412
Query: 383 REK-DAASWTSII 394
K D+A W S++
Sbjct: 413 PMKPDSAIWGSLL 425
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 144/301 (47%), Gaps = 11/301 (3%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F+ +++ + N L+ H G + A IF +Q + ++ ++ +A+ G +
Sbjct: 173 KVFEEMTERDAVSWNTLI--SGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCY 230
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+L F +++ G+ PD + V A LG ++ G+ +H Y K G + VCN++
Sbjct: 231 ADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNAL 290
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
++MY G I ++LFD+M ++DV+SW+ I G R +A+++F+ M Q + P+
Sbjct: 291 IEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEM-QKAKIEPN 349
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELF 247
T V LSAC L G + ++ P + + L+++ G L +A EL
Sbjct: 350 IITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELI 409
Query: 248 DEMPNK-NVICWTSMVSGYVNCGQLEKA----RDLFDRSPVRDIVLWTAMINGYVQFNRF 302
+MP K + W S++S + LE A L + P D + + N Y ++
Sbjct: 410 KKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPA-DTGNYVLLSNLYADLGKW 468
Query: 303 D 303
D
Sbjct: 469 D 469
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/600 (34%), Positives = 329/600 (54%), Gaps = 44/600 (7%)
Query: 5 KQIQAQIFQIGLQQNP---ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
K + ++I G + + L K+ C G+ ++F + + L+A+N +I
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKC-----GSYKDCRQVFEKLVNRDLIAWNTMIG 301
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A+ G + ++ ++++++ GV P+ TY + A + G+++H V K G
Sbjct: 302 GLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTS 361
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D V N+++ MY G I + + +FD+M KDV+SW I G K +A+ V++ M+
Sbjct: 362 DIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQ 421
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
Q + P+ T S L+AC++ LE G+ IH+ + + L +GN L++MY
Sbjct: 422 QA-GVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMY------ 474
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
SM CG ++ AR +FDR RDIV + AMI GY N
Sbjct: 475 -------------------SM------CGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHN 509
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LF +Q LKPDK + +L CA G+LE + IH + + D V
Sbjct: 510 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGN 569
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL+ YAKCG A +F ++ +++ SW +II G A +G+ AL+LF +M G KP
Sbjct: 570 ALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKP 629
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D +TF+ +LSACSH GL++EGRR+F +M++ + I P +EHYGC++DLLGRAG LDEAE L
Sbjct: 630 DIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEAL 689
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I+ +P + N I +GALL ACRI+GNV + E+ A K++ ++ + L+++YA+A
Sbjct: 690 IKTMPFQANTRI---WGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAA 746
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W+ +R+ M++ GV K PG S I++ +H F+ D SH + ++IY+ LDR+ +
Sbjct: 747 GMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAM 806
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 166/626 (26%), Positives = 291/626 (46%), Gaps = 80/626 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFG--SIQSPCLLAYNLLIKA 62
+Q+ I Q + T+N L+ + G++ A +++ S + ++N ++
Sbjct: 43 RQVHQHIIQHRTVPDQYTVNALINM--YIQCGSIEEARQVWKKLSYMERTVHSWNAMVVG 100
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ + G K+L L ++++ G++PD T + G ++ G ++H ++ GL FD
Sbjct: 101 YIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFD 160
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
V N I++MY G I +++FD+M K VVSW ++I G+ C R E A ++F++M Q
Sbjct: 161 VKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQ 220
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLS 241
++P+ T +S L+A ++ L+ GK +H R +N E +G AL+ MY KCG
Sbjct: 221 E-GVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYK 279
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+ R++F+++ N+++I W +M+ G G E+A ++++
Sbjct: 280 DCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYN---------------------- 317
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+MQ + P+K V LL C AL GK IH + + T D V A
Sbjct: 318 ---------QMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNA 368
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI MY++CG I+ A +F ++ KD SWT++I GLA +G +AL ++ +M G +P+
Sbjct: 369 LISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPN 428
Query: 422 DITFIGVLSACSHGGLVDEGRRFF---------------NTMTEVYQ------------- 453
+T+ +L+ACS ++ GRR NT+ +Y
Sbjct: 429 RVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFD 488
Query: 454 --IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
IQ + Y +I L EA +L ++ E + Y +L+AC G+++
Sbjct: 489 RMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEW 548
Query: 512 GEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
++ L+ K D+S L + YA + D + V +KM + V I N
Sbjct: 549 AREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNV--------ISWN 600
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRM 596
II G H ++ + +RM
Sbjct: 601 AIIG----GSAQHGRGQDALQLFERM 622
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 189/420 (45%), Gaps = 72/420 (17%)
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT-PIMGNA 229
+ AVDV + ++Q + + L C +K+L G+++H++I Q NA
Sbjct: 5 DGAVDVVQYLQQQ-GAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA 63
Query: 230 LLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
L++MY +CG + EAR+++ ++ + V W +MV GY+ G +EK
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEK-------------- 109
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
A+ L R+MQ L PD+ +++ L+ C GALE G+ IH
Sbjct: 110 -----------------ALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQA 152
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ + D VA ++ MYAKCG IE+A E+F ++ +K SWT I G A G+ A
Sbjct: 153 MQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAF 212
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR----RFFN-----------TMTEVY 452
E+F +M G P+ IT+I VL+A S + G+ R N + ++Y
Sbjct: 213 EIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMY 272
Query: 453 ----------QIQPKLEH-----YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP--- 494
Q+ KL + + +I L G +EA E+ ++ E ++P
Sbjct: 273 AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREG---VMPNKI 329
Query: 495 LYGALLSACRIYGNVDMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKM 553
Y LL+AC + G+++ + + K + D L ++Y+ +D V KM
Sbjct: 330 TYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM 389
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/531 (37%), Positives = 303/531 (57%), Gaps = 43/531 (8%)
Query: 103 EVKKGEKVHGYV-VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
++K +K+H + + L + + +M Y V G+ + + +FDE+P K+VV +NV I
Sbjct: 50 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 109
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-EL 220
+V + DA+ VF+ M G + PD T L A + ++L +G +IH + + L
Sbjct: 110 RSYVNNHLYSDALLVFKNM-AGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 168
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA------ 274
+ +GN L+ MY KCGCL EA + D+MP ++V+ W S+V+G GQ + A
Sbjct: 169 DLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 228
Query: 275 -------------------------------RDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+++F + + +V W MI Y+ +
Sbjct: 229 MELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPA 288
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EAV +F +M+ + PD + ++L C L AL G+ IH Y+ R+ + ++ ALI
Sbjct: 289 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALI 348
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MYAKCG +E A E+F +++ +D SWTS+I MNGK A+ LFS+M G PD I
Sbjct: 349 DMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSI 408
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
F+ VLSACSH GL+DEGR +F MTE +I P++EH+ C++DLLGRAG +DEA I++
Sbjct: 409 AFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQ 468
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P E NE + +GALLSACR+Y N+ +G A L ++ + S ++ LL+NIYA A RW
Sbjct: 469 MPMEPNERV---WGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRW 525
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
EDVT VR MK G++K+PG S+ E++ +H FL GD SH + K+IY LD
Sbjct: 526 EDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELD 576
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 243/534 (45%), Gaps = 87/534 (16%)
Query: 4 LKQIQAQI-FQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
LK++ ++I L NP KLM C P IF I ++ +N++
Sbjct: 54 LKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEP-----WSTRHIFDEIPKKNVVFFNVM 108
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+++ + +LL+F + G+ PD++TYP V KA ++ G ++H VV+ GL
Sbjct: 109 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 168
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ + +V N ++ MYG G + ++ D+MP +DVVSWN ++G + +F+DA++V +
Sbjct: 169 DLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 228
Query: 180 MRQGCNLMPDEGTVVSTLSAC--TALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCK 236
M + L PD GT+ S L A T L N+ KE+ + N+ L + N ++ +Y
Sbjct: 229 M-ELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSL----VSWNVMIAVYMN 283
Query: 237 CGCLSEARELFDEMPNK---------------------------------------NVIC 257
+EA ++F +M + N++
Sbjct: 284 NSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLL 343
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
+++ Y CG LE AR++FD+ RD+V WT+MI+ Y + +AV+LF MQ + L
Sbjct: 344 ENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGL 403
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKAL 376
PD V++L+ C+ G L++G++ + E +I ++++ + G +++A
Sbjct: 404 NPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAY 463
Query: 377 EIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
++ E + W G + A ++S MI IG+L+A
Sbjct: 464 GFIKQMPMEPNERVW----------GALLSACRVYSNMI-----------IGLLAADQLF 502
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
L E ++ ++ +Y + E + ++ G I+K+P +N
Sbjct: 503 QLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKG--------IKKMPGVSN 548
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 332/599 (55%), Gaps = 39/599 (6%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L Q+ Q+ GL + + K + C H G++ YA K F + P +L +N +IK
Sbjct: 2 HLDQVYVQLIVSGLHKCRFLMIKFINACLH--FGDVNYAHKAFREVSEPDILLWNAIIKG 59
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ +K + ++ ++ V P+ FT+ +V KA G G+++HG K G +
Sbjct: 60 YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 119
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V NS++ MY G+I + +FD++ D+ VVSW ISG+V+ +A++VF+ MRQ
Sbjct: 120 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 179
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLS 241
CN+ PD +VS ++A T +++L GK IH + + LEF P + +L MY K G +
Sbjct: 180 -CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLV- 237
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
E AR F+R +++LW AMI+GY
Sbjct: 238 ------------------------------EVARFFFNRMEKPNLILWNAMISGYANNGY 267
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+EA+ LFREM ++ D + + + AQ+G+LE +W+ GYI+++ D V T
Sbjct: 268 GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTG 327
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MYAKCG I A +F + +KD W+ +I G ++G +A+ L+++M G P+
Sbjct: 328 LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 387
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
D TFIG+L+AC + GLV EG F+ M + + I+P +HY C++DLLGRAG L++A + I
Sbjct: 388 DGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFI 446
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P + V ++GALLSAC+I+ V +GE A L ++ ++ + L+N+YASA+
Sbjct: 447 MSMPIKPG---VSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAH 503
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W V NVR M + G+ K G SSIEING + F VGD SH + KEI+ LDR+ K L
Sbjct: 504 LWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRL 562
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 214/662 (32%), Positives = 346/662 (52%), Gaps = 78/662 (11%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
QL+Q + L + ++ L++ CT H + Y + IF S SP Y+ ++K
Sbjct: 16 QLRQFHGHLVHNSLHSHNYWVSLLLINCTRL-HAHPAYVDSIFTSSPSPDASVYSCMLKY 74
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+++ G+ + + LF + P F Y ++ K G K G H YV+K G D
Sbjct: 75 YSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNLFHAYVLKLGHIDD 129
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDE-------------------------------MPD 151
++ N+I+DMY G++ + LF++ MP
Sbjct: 130 HFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA 189
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRM---------------------RQGCNL---M 187
+++++W ++G+ K E A F M ++ NL M
Sbjct: 190 RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM 249
Query: 188 PDEG------TVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+EG T V T+S+C+++ + L I R I+Q+ + + ALLDM+ K G L
Sbjct: 250 LEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNL 309
Query: 241 SEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
AR +FDE+ +N + W M+S Y G+L AR+LFD P RD+V W +MI GY Q
Sbjct: 310 EIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369
Query: 300 NRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
++ LF+EM + ++PD+ + ++L+ C +GAL+ W+ + E I +
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISG 429
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+LI MY+KCG + A IF + +D S+ ++I G A NG +A++L M G
Sbjct: 430 FNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PD +T+IGVL+ACSH GL++EG+ F ++ P ++HY C++DLLGRAG LDEA+
Sbjct: 490 EPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAK 544
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
LI+ +P + + +YG+LL+A RI+ V +GE A+ L ++E ++ + LL+NIYA
Sbjct: 545 MLIQSMPMKPH---AGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYA 601
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
S RWEDV VR+ MK+ G++K G S +E G +H+F VGD SH + K+IY +L + +
Sbjct: 602 SFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELER 661
Query: 599 TL 600
+
Sbjct: 662 KM 663
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/601 (34%), Positives = 330/601 (54%), Gaps = 48/601 (7%)
Query: 6 QIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ + +F+ G+ + +L L V C G++ A IF S ++ +NL++ A
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKC-----GDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
F + KS LF +++ G+ P+ FTYP + + E+ GE++H VKTG E D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
YV ++DMY G + +++ + + +KDVVSW I+G+V+ +DA+ F+ M Q
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM-Q 438
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLS 241
C + PD + S +S C + + G +IH I + + NAL+++Y +CG +
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIR 498
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
EA F+E+ +K+ I W +VSG+ G E
Sbjct: 499 EAFSSFEEIEHKDEITWNGLVSGFAQSGLHE----------------------------- 529
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
EA+ +F M +K + F V+ L+ A L ++QGK IH + + + + V A
Sbjct: 530 --EALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI +Y KCG E A F E+ E++ SW +II + +G+ +AL+LF QM G KP+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
D+TFIGVL+ACSH GLV+EG +F +M++ Y I+P+ +HY C+ID+ GRAG LD A++ I
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
++P + ++ + LLSAC+++ N+++GE A L ++E DS+ + LL+N YA
Sbjct: 708 EEMPIAADAMV---WRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTE 764
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML----DRMA 597
+W + VR+ M++ GVRK PG S IE+ ++H F VGD H ++IY+ L DR+A
Sbjct: 765 KWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVA 824
Query: 598 K 598
K
Sbjct: 825 K 825
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 239/520 (45%), Gaps = 57/520 (10%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ +G +L A ++F + + +++ ++ +A+ G ++L L+ ++ GV P +
Sbjct: 87 YSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVL 146
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V + +G +H K G + +V N+++ +Y G +++F +MP
Sbjct: 147 SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH 206
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+D V++N ISGH +C E A+++F M Q L PD T+ S L+AC +L +L+ G +
Sbjct: 207 RDTVTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 212 IHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H Y+ + + IM +LLD+Y V CG
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLY-------------------------------VKCGD 294
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+E A +F+ S ++VLW M+ + Q N ++ LF +MQ ++P++F +L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C ++ G+ IH + D V+ LI+MY+K G +EKA + L+EKD SW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
TS+I G + AL F +M G PD+I +S C+ N M +
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG----------INAMRQ 464
Query: 451 VYQIQPKLEHYG---------CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
QI ++ G L++L R G + EA +I ++ +EI + L+S
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHK-DEIT---WNGLVS 520
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
G + K+ +++ K + F T ++ + ASAN
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVF-TFVSALSASAN 559
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 188/381 (49%), Gaps = 34/381 (8%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H V GL V N ++D+Y G + +++F+E+ +D VSW +SG+ +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MG 227
E+A+ ++R+M + ++P + S LS+CT + G+ IH + + I +G
Sbjct: 123 LGEEALGLYRQMHRA-GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG 181
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NA++ +Y +CG A +F +MP+++ + + +++SG+ CG E A ++F+
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFE-------- 233
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
EMQ L PD + +LL CA LG L++G +H Y+
Sbjct: 234 -----------------------EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYL 270
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ I+ D ++ +L+++Y KCG +E AL IF + W ++ + K+
Sbjct: 271 FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSF 330
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
ELF QM + G +P+ T+ +L C+ +D G + ++++ + + G LID+
Sbjct: 331 ELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDM 389
Query: 468 LGRAGLLDEAEELIRKIPNEN 488
+ G L++A ++ + ++
Sbjct: 390 YSKYGWLEKARRVLEMLKEKD 410
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 40/326 (12%)
Query: 179 RMRQGCNLMPDEGTVVSTLSACTAL-KNLELGKEIH-RYINQELEFTPIMGNALLDMYCK 236
+ RQ L P + L AC + ++ EIH + + + L I+GN L+D+Y K
Sbjct: 32 KARQHGGLGPLD--FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSK 89
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G + AR +F+E+ ++ + W +M+SGY G E
Sbjct: 90 NGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE------------------------ 125
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
EA+ L+R+M + P ++L ++L+ C + QG+ IH ++ +
Sbjct: 126 -------EALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V A+I +Y +CG A +F ++ +D ++ ++I G A G ALE+F +M
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD +T +L+AC+ G + +G + + + + I G L+DL + G ++
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVET 297
Query: 477 AEELIRKIPNENNEIIVPLYGALLSA 502
A L+ I N ++ V L+ +L A
Sbjct: 298 A--LV--IFNSSDRTNVVLWNLMLVA 319
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/526 (38%), Positives = 308/526 (58%), Gaps = 13/526 (2%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N +IK+F+ R +LLLF + E VS D F+ V KA LG V G +VHG++
Sbjct: 61 WNAVIKSFSHGVDPRNALLLFCLMIENSVSVDKFSISLVLKACSRLGFVDFGMQVHGFLR 120
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
KTG+ D ++ N ++ +Y G + +++FD MP +D VS+N I G+VKC E A +
Sbjct: 121 KTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARE 180
Query: 176 VFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDM 233
+F +LMP E ++S + E G + + E+ E I N+L+D
Sbjct: 181 LF-------DLMPREKKNLISWNCMISGYTQSEDGVNVASKLFDEMPEKDLISWNSLIDG 233
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y K + +A+ LFD MP K+V+ W +M+ GY G + +A+ LFD P RD+V + +M+
Sbjct: 234 YVKHRRIEDAKSLFDLMPRKDVVTWATMIDGYAKLGFVHQAKKLFDEMPQRDVVAYNSMM 293
Query: 294 NGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
GYVQ EA+ +F +M+ L PD+ LV +L+ AQLG L + IH YI +N+
Sbjct: 294 AGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKF 353
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
+ + ALI+ Y+KCG I+K++ +F E+ K W ++I GLA++G A ++ Q
Sbjct: 354 RLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 413
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
+ KPDDITFIGVL+ACSH GLV EG F M ++I+PKL+HYGC++D+L R+G
Sbjct: 414 IEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSG 473
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
++ A+ LI ++P E N++I + L+AC + + GE +A L + S L
Sbjct: 474 SIELAKNLIEEMPIEPNDVI---WRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVL 530
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
L+N+YAS W++V VR MKE +RK+PGCS IE++G +HEF V
Sbjct: 531 LSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWIELDGNVHEFFV 576
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 26/260 (10%)
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR------EKDAASWTSIICGLA 398
G+I +T V++ + L E A IF+E E+D W ++I +
Sbjct: 13 GFIKNPNLTTRIVLS---FSASRRSYLAEFARCIFHEYHVSSYSVEEDPFLWNAVIKSFS 69
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
AL LF MI D + VL ACS G VD G + + + I L
Sbjct: 70 HGVDPRNALLLFCLMIENSVSVDKFSISLVLKACSRLGFVDFGMQVHGFLRKT-GIYSDL 128
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
CLI L + G L A ++ ++P ++ Y +++ G ++ +L L
Sbjct: 129 FLQNCLIGLYLKCGCLGFARQVFDRMPQRDS----VSYNSMIDGYVKCGLIESARELFDL 184
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ + + S++ +++ S ED NV K+ + ++P I N +I ++
Sbjct: 185 MPREKKNLISWNCMISGYTQS----EDGVNVASKLFD----EMPEKDLISWNSLIDGYV- 235
Query: 579 GDPSHSEMKEIYSMLDRMAK 598
H +++ S+ D M +
Sbjct: 236 ---KHRRIEDAKSLFDLMPR 252
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/636 (32%), Positives = 342/636 (53%), Gaps = 48/636 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ + G + + N L+V + L ++++F I ++++N L +
Sbjct: 177 KQVHGVVVVSGFEGDVFVANTLVVM--YAKCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ +++ LF ++ G+ P+ F+ + A L + +G+ +HGY++K G ++D +
Sbjct: 235 QXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
N+++DMY +G + + +F+++ D+VSWN I+G V E A+++ +M++
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQL 354
Query: 185 NL----MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ M E + ++ +L ++ N E I NA++ Y +
Sbjct: 355 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 414
Query: 241 SEARELFDEMPNKNV---------------------ICW------------------TSM 261
EA LF EM + + +C S+
Sbjct: 415 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL 474
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ Y C +E A +F+ + D+V +T+MI Y Q+ + +EA+ LF EMQ + LKPD+
Sbjct: 475 IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 534
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
F+ +LL CA L A EQGK +H +I + +D +L+ MYAKCG I+ A F E
Sbjct: 535 FVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 594
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
L E+ SW+++I GLA +G +AL+LF+QM+ G P+ IT + VL AC+H GLV E
Sbjct: 595 LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEA 654
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
+ +F +M E++ +P EHY C+IDLLGRAG ++EA EL+ K+P E N ++GALL
Sbjct: 655 KLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEAN---ASVWGALLG 711
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
A RI+ +V++G + A +L +E + S H LLANIYASA +WE+V VR+ M++ V+K
Sbjct: 712 AARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKE 771
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
PG S IE+ ++ FLVGD SH +EIY+ LD ++
Sbjct: 772 PGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 807
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 253/515 (49%), Gaps = 59/515 (11%)
Query: 6 QIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
QI A I + GL +P N L+ ++ G YA K+ P L++++ LI +A
Sbjct: 77 QIHAHITKSGLSDDPSIRNHLINLYSKCRXFG---YARKLVDESSEPDLVSWSALISGYA 133
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G +L+ F ++ GV + FT+ V KA + +++ G++VHG VV +G E D +
Sbjct: 134 QNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVF 193
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V N+++ MY + + K+LFDE+P+++VVSWN S +V+ +AV +F M
Sbjct: 194 VANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLS- 252
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
+ P+E ++ S ++ACT L++ GK IH Y I ++ P NAL+DMY K G L++A
Sbjct: 253 GIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADA 312
Query: 244 RELFDEMPNKNVICWTSMVSG--------------------------------------- 264
+F+++ +++ W ++++G
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVG 372
Query: 265 ----YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
Y C LE AR F+ P +D++ W A+I+GY Q+ EA++LF EM + +
Sbjct: 373 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFN 432
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+ L +L A L + + +HG ++ D V +LI+ Y KC +E A IF
Sbjct: 433 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFE 492
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
E D S+TS+I A G+ +AL+LF +M KPD +L+AC++ ++
Sbjct: 493 ECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQ 552
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G+ Q+ + YG ++D+ L++
Sbjct: 553 GK----------QLHVHILKYGFVLDIFAGNSLVN 577
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 54/375 (14%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEA 243
N P + LS C K+L G +IH +I + L P + N L+++Y KC
Sbjct: 51 NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXF--- 107
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
GY AR L D S D+V W+A+I+GY Q
Sbjct: 108 --------------------GY--------ARKLVDESSEPDLVSWSALISGYAQNGLGG 139
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ F EM ++ +K ++F ++L C+ + L GK +HG + + D VA L+
Sbjct: 140 GALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLV 199
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKC + +F E+ E++ SW ++ +A+ LF +M+ G KP++
Sbjct: 200 VMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEF 259
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE----HYGCLIDLLGRAGLLDEAEE 479
+ +++AC+ GL D R + Y I+ + L+D+ + G L +A
Sbjct: 260 SLSSMVNACT--GLRDSSR---GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVD--------MGEKLAALLEKIESKDSSFHT 531
+ KI + + + A+++ C ++ + + M +L + L K++ + F +
Sbjct: 315 VFEKIKQPD----IVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVS 370
Query: 532 L-LANIYASANRWED 545
+ L ++Y+ + ED
Sbjct: 371 VGLVDMYSKCDLLED 385
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%)
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+I QF+ + A+ + P LL+ C +L G IH +I ++
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
++ D + LI +Y+KC A ++ E E D SW+++I G A NG AL F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 412 QMISGGAKPDDITFIGVLSACS 433
+M G K ++ TF VL ACS
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACS 168
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/589 (32%), Positives = 341/589 (57%), Gaps = 15/589 (2%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
+A ++F S+ ++++N+++ A ++ G R++L + ++ +GV D+ TY A
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L ++ G+++H V++ D YV ++++++Y G K +F+ + D++ V+W V
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRYINQ 218
I+G ++ F ++V++F +MR LM D+ + + +S C + +L LG+++H +
Sbjct: 342 LIAGFLQHGCFTESVELFNQMR--AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLK 399
Query: 219 ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ ++ N+L+ MY KC L A +F M K+++ WTSM++ + G + KAR+
Sbjct: 400 SGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREF 459
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGA 336
FD ++++ W AM+ Y+Q ++ + ++ M + ++PD V L GCA LGA
Sbjct: 460 FDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGA 519
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G I G + + +D VA A+I MY+KCG I +A ++F L KD SW ++I G
Sbjct: 520 NKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 579
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+ +G +A+E+F ++ GAKPD I+++ VLS CSH GLV EG+ +F+ M V+ I P
Sbjct: 580 YSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISP 639
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
LEH+ C++DLLGRAG L EA++LI ++P + ++GALLSAC+I+GN ++ E A
Sbjct: 640 GLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPT---AEVWGALLSACKIHGNNELAELAA 696
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+ +++S DS + L+A IYA A + +D +R+ M++ G++K PG S +E+N +H F
Sbjct: 697 KHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVF 756
Query: 577 LVGDPSHSEMKEIYSMLD-------RMAKTLLDSKQNAMEGDNLVAINF 618
D SH ++ I LD R+ DS ++ + +A+ F
Sbjct: 757 KADDVSHPQVIAIRKKLDELMEKIARLGYVRTDSPRSEIHHSEKLAVAF 805
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 215/459 (46%), Gaps = 69/459 (15%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFV 94
G L A ++FG + + + ++N L+ + + + SL F + G SP+ FT+ +
Sbjct: 85 GRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYA 144
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI--------------- 139
K+ G LGE ++ G V K G + D+ V +++DM+ G +
Sbjct: 145 MKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTI 204
Query: 140 -C---------------NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
C + +LFD MP++DVVSWN+ +S + R +A+D+ M Q
Sbjct: 205 FCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM-QS 263
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE-FTPIMGNALLDMYCKCGCLSE 242
+ D T S+L+AC L +L GK++H + + L P + +AL+++Y KCGC E
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKE 323
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A+ +F+ + ++N + WT +++G ++Q F
Sbjct: 324 AKGVFNSLHDRNNVAWTVLIAG-------------------------------FLQHGCF 352
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
E+V LF +M+ + D+F L L++GC L G+ +H ++ VV+ +L
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSL 412
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I MYAKC ++ A IF + EKD SWTS+I + G I KA E F M + +
Sbjct: 413 ISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGM----STKNV 468
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
IT+ +L A G ++G R +N M ++P Y
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTY 507
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 197/387 (50%), Gaps = 12/387 (3%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N +++ Y LG++ + +LF MP +DV SWN +SG+ + ++ +++ F M + +
Sbjct: 75 NVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDS 134
Query: 187 MPDEGTVVSTLSACTALKN----LELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
P+ T + +C AL L+L + ++ +Q+ + AL+DM+ +CG +
Sbjct: 135 SPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQD---DSDVAAALVDMFVRCGTVDL 191
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A LF + + C SM+ GYV ++ A +LFD P RD+V W M++ Q R
Sbjct: 192 ASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRV 251
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ + +MQ ++ D + LT CA+L +L GK +H + N +D VA+AL
Sbjct: 252 REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASAL 311
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
+E+YAKCG ++A +F L +++ +WT +I G +G +++ELF+QM + D
Sbjct: 312 VELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQ 371
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
++S C + GR+ + + QIQ + LI + + L AE + R
Sbjct: 372 FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAESIFR 430
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNV 509
+ NE + + ++++A GN+
Sbjct: 431 FM----NEKDIVSWTSMITAHSQVGNI 453
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 139/311 (44%), Gaps = 38/311 (12%)
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELF-DEMPNKNVICWTSMVSGYVNCGQLE 272
R + L + N LL Y CG L +AR L ++ + NVI M++GYV G+L
Sbjct: 29 RLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLS 88
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILVALLTGC 331
A +LF R P RD+ W +++GY Q ++ ++ F M P+ F + C
Sbjct: 89 DAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSC 148
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL-------------------- 371
LG + G + + D+ VA AL++M+ +CG
Sbjct: 149 GALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRN 208
Query: 372 -----------IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
++ ALE+F + E+D SW ++ L+ +G++ +AL++ M S G +
Sbjct: 209 SMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRL 268
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAE 478
D T+ L+AC+ + G++ +V + P ++ Y L++L + G EA+
Sbjct: 269 DSTTYTSSLTACARLSSLRWGKQLH---AQVIRNLPCIDPYVASALVELYAKCGCFKEAK 325
Query: 479 ELIRKIPNENN 489
+ + + NN
Sbjct: 326 GVFNSLHDRNN 336
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI + ++GL + N V + G +L A K+F + ++++N +I +++
Sbjct: 525 QIIGRTVKVGLILDTSVANA--VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 582
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG-------EKVHGYVVKTG 118
G ++++ +F + +RG PD +Y V G V++G ++VH + G
Sbjct: 583 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHN--ISPG 640
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
LE + C ++D+ G G + K L DEMP K
Sbjct: 641 LEH--FSC--MVDLLGRAGHLTEAKDLIDEMPMK 670
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/488 (39%), Positives = 290/488 (59%), Gaps = 6/488 (1%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H ++K G + + + N+++D+YG G I +LFDEMP++D VSW ++ H K +
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMG 227
+ + M L PD + AC++L L LGK++H R++ ++
Sbjct: 84 IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK 143
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
++L+DMY KCG EAR +FD + KN + WTSM+SGY G+ +A DLF ++PVR++
Sbjct: 144 SSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLK-PDKFILVALLTGCAQLGALEQGKWIHGY 346
WTA+I+G +Q + +LF EM+ + D +L +++ GCA L LE GK IHG
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
+ ++ AL++MYAKC I A +IFY + KD SWTSII G A +GK +A
Sbjct: 264 VIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEA 323
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L L+ +M+ KP+++TF+G+L ACSH GLV GR F +MT Y I P L+HY CL+D
Sbjct: 324 LTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLD 383
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LL R+G LDEAE L+ KIP + +E P + +LLSAC + N++MG ++A + ++ +D
Sbjct: 384 LLSRSGHLDEAENLLDKIPFKPDE---PTWASLLSACMRHNNLEMGVRIADRVLDLKPED 440
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
S + LL+N+YA A W V+ VR+ M M VRK PG SSI+ F G+ M
Sbjct: 441 PSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPM 500
Query: 587 K-EIYSML 593
K EI ++L
Sbjct: 501 KNEICNLL 508
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 216/483 (44%), Gaps = 76/483 (15%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ +QI + G ++ N L+ + G + A ++F + + +++ ++ A K
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLD--VYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNK 81
Query: 66 KGSFRKSL-LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
R++L +L + G+ PD+F + + +A LG ++ G++VH + + D
Sbjct: 82 ALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEV 141
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM---- 180
V +S++DMY G+ + +FD + K+ VSW ISG+ + R +A+D+F +
Sbjct: 142 VKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRN 201
Query: 181 ----------------------------RQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
R+G +++ D + S + C L LELGK+I
Sbjct: 202 LFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV-DPLVLSSVVGGCANLALLELGKQI 260
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H I E + NAL+DMY KC + A+++F MP K+VI WTS++ G G+
Sbjct: 261 HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
E EA+ L+ EM + R+KP++ V LL C
Sbjct: 321 E-------------------------------EALTLYDEMVLSRIKPNEVTFVGLLYAC 349
Query: 332 AQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-DAAS 389
+ G + +G+ + + I T L+++ ++ G +++A + ++ K D +
Sbjct: 350 SHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPT 409
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG----GLVDEGRRFF 445
W S++ + + + + +++ KP+D + +LS G G V + R+
Sbjct: 410 WASLLSACMRHNNLEMGVRIADRVLD--LKPEDPSTYILLSNVYAGAEMWGSVSKVRKLM 467
Query: 446 NTM 448
++M
Sbjct: 468 SSM 470
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA+ + +H I + ++++ L+++Y KCGLI +AL++F E+ +D SW
Sbjct: 13 CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72
Query: 391 TSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFF-NTM 448
SI+ + L + + M + G +PD F ++ ACS G + G++ M
Sbjct: 73 ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFM 132
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
+ ++ LID+ + G DEA + I +N+
Sbjct: 133 LSXFCDDEVVK--SSLIDMYTKCGQPDEARAVFDSILFKNS 171
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 213/598 (35%), Positives = 322/598 (53%), Gaps = 55/598 (9%)
Query: 6 QIQAQIFQIG-LQQNPETLNK--LMVFCTHPSHGNLLYAEKIFGSIQSPCL---LAYNLL 59
Q A + G L +P L+ L+ + PS L A+ +F + P A+N
Sbjct: 28 QCHALLLTSGHLAASPLRLSNHLLLALASVPSAAAL--ADVVFARLPLPAARDPFAWNTA 85
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ A R +LL F+++R GV PD +T+P V KA G + G VH V+ GL
Sbjct: 86 IRLHAPARP-RAALLYFARMRRCGVRPDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRGL 144
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMRFEDAVDVF 177
D + N+++ Y + I + +K+FDE +D+VSWN ++G+V C A ++F
Sbjct: 145 AADLFTVNALISFYCRILDIRSGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEMGLAQEMF 204
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
M Q T S T L+D Y K
Sbjct: 205 DEMPQK-----------DTFSWAT----------------------------LIDGYGKQ 225
Query: 238 GC--LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
G + ARELFD+MP ++++CW SM+ GY G++++AR LF+ P R+++ W+ +I+G
Sbjct: 226 GGAGVDRARELFDQMPERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDG 285
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+V EA+ F+ M L+PD+ V ++ CAQLGALEQG+W+H Y+ + ++ D
Sbjct: 286 HVSCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSD 345
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
VV TALI+MY KCG ++ A+ IF + E+ +W +I GL +G A+ LF +M +
Sbjct: 346 VVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEA 405
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
DD++ +G+L+AC+H GLV EG F+ M + + I PK+EHYG L+DLLGRAG LD
Sbjct: 406 ESVAVDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLD 465
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+A I +P E L+G+LL+ACR + V++ E L + + DS + LL+N
Sbjct: 466 QARHAIETMPMEPTP---ELWGSLLAACRSHSCVELAELSVERLADLGADDSGVYVLLSN 522
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
IYA W DV +R+ M + G+RK G S IE++G IHEF+ G S+ E+Y ML
Sbjct: 523 IYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNGVGSYICKDEMYLML 580
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 326/560 (58%), Gaps = 8/560 (1%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
+A + F + ++++N++I A ++ G R++L L ++ +GV D+ TY A
Sbjct: 222 HAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACA 281
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L + G+++H V+++ + D YV ++++++Y G K++F+ + D++ VSW V
Sbjct: 282 RLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV 341
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRY-IN 217
I G ++ F +V++F +MR LM D+ + + +S C +L LG+++H +
Sbjct: 342 LIGGSLQYECFSKSVELFNQMR--AELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLK 399
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
++ N+L+ +Y KCG L A +F M ++++ WTSM++ Y G + KAR+
Sbjct: 400 SGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREF 459
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGA 336
FD R+ + W AM+ Y+Q ++ + ++ M + + PD V L GCA +GA
Sbjct: 460 FDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGA 519
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G I G+ + + ++ VA A I MY+KCG I +A ++F L KD SW ++I G
Sbjct: 520 NKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITG 579
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+ +G +A + F M+S GAKPD I+++ VLS CSH GLV EG+ +F+ MT V+ I P
Sbjct: 580 YSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISP 639
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
LEH+ C++DLLGRAG L EA++LI K+P + ++GALLSAC+I+GN ++ E A
Sbjct: 640 GLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT---AEVWGALLSACKIHGNDELAELAA 696
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+ +++S DS + LLA IY+ A + +D VR+ M++ G++K PG S +E+ +H F
Sbjct: 697 KHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVF 756
Query: 577 LVGDPSHSEMKEIYSMLDRM 596
D SH ++ I + LD +
Sbjct: 757 KADDVSHPQVIAIRNKLDEL 776
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 162/307 (52%), Gaps = 1/307 (0%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N +M+ Y G + + ++LFD MP +DV SWN +SG+ + RF D ++ F M + +
Sbjct: 75 NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDS 134
Query: 187 MPDEGTVVSTLSACTALKNLELGKEI-HRYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
+P+ T + +C AL EL ++ + + P + AL+DM+ +CG + A
Sbjct: 135 LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASR 194
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
LF ++ + C SM++GY ++ A + F+ RD+V W MI Q R EA
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ L EM ++ D + LT CA+L +L GK +H + + +D VA+ALIE+
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
YAKCG ++A +F L+++++ SWT +I G +K++ELF+QM + D
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 426 IGVLSAC 432
++S C
Sbjct: 375 ATLISGC 381
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 235/536 (43%), Gaps = 71/536 (13%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
+ P + ++ + G+L AE++F + + ++N L+ + + F L F
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 78 KLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK-------------------- 116
+ G S P+ FT+ V K+ G LG + ++ G K
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 117 ----------TGLEFDTYVC-NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+ +E T C NS++ Y L I + + F++M ++DVVSWN+ I+
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 166 KCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFT 223
+ R +A+ + M R+G L D T S+L+AC L +L GK++H + + L +
Sbjct: 247 QSGRVREALGLVVEMHRKGVRL--DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
P + +AL+++Y KCG EA+ +F+ + ++N + W
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW------------------------- 339
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
T +I G +Q+ F ++V LF +M+ + D+F L L++GC L G+ +
Sbjct: 340 ------TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQL 393
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H ++ VV+ +LI +YAKCG ++ A +F + E+D SWTS+I + G I
Sbjct: 394 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 453
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
KA E F M + A IT+ +L A G ++G + ++ M + P Y
Sbjct: 454 IKAREFFDGMDTRNA----ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
L G +++I + V + A ++ G + +KL LL
Sbjct: 510 LFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 160/368 (43%), Gaps = 39/368 (10%)
Query: 192 TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFD-E 249
+ L +C + L + +H R + L + N LL Y CG LS+AR L +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
+ NVI M++GY G L A +LFDR P RD+ W +++GY Q RF + + F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 310 REMQIIRLK-PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
M P+ F ++ C LG E + G + D V TAL++M+ +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 369 CGL-------------------------------IEKALEIFYELREKDAASWTSIICGL 397
CG I+ A+E F ++ E+D SW +I L
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+ +G++ +AL L +M G + D T+ L+AC+ + G++ +V + P+
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLH---AKVIRSLPQ 302
Query: 458 LEHY--GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
++ Y LI+L + G EA+ + + + N+ L G L +V++ ++
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362
Query: 516 AALLEKIE 523
A L I+
Sbjct: 363 RAELMAID 370
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 334/637 (52%), Gaps = 81/637 (12%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A +F I +P + YN LI+A++ +G L S R R P+N+T+PFV
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA L +++ VH + + GL D +V +++D+Y + +F MP +DVV
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN ++G+ ++ D + M+ + P+ T+V+ L L G+ +H Y
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQD--DHAPNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 216 INQELEFTP-----IMGNALLDMYCK-------------------------------CGC 239
+ ++G ALLDMY K CG
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 240 LSEARELFDEM--------------------PNKNVICW--------------------T 259
+ EA LF +M N + +C
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGN 374
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
S++S Y G +++A LFD+ V+D V ++A+++GYVQ + DEA +FR+MQ ++P
Sbjct: 375 SLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQP 434
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D +V+L+ C+ L AL+ GK HG + I + + ALI+MYAKCG I+ + +IF
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIF 494
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
+ +D SW ++I G ++G +A LF M +PDD+TFI ++SACSH GLV
Sbjct: 495 DVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVT 554
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG+R+F+ M Y I P++EHY ++DLL R G LDEA + I+ +P + + V ++GAL
Sbjct: 555 EGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKAD---VRVWGAL 611
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
L ACR++ N+D+G++++++++++ + + LL+NI+++A R+++ VR KE G +
Sbjct: 612 LGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFK 671
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
K PGCS IEING +H F+ GD SH++ EIY LD +
Sbjct: 672 KSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNI 708
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 1/175 (0%)
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
CG L AR LFD+ P I + A+I Y + +P+ + +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L C+ L L + +H + + D V+TAL+++YAKC A +F + +D
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+W +++ G A++GK + + M A P+ T + +L + G + +GR
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGR 249
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/451 (40%), Positives = 284/451 (62%), Gaps = 8/451 (1%)
Query: 154 VVSWNVSISGHVKCMR---FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
V +N +I G + R +V +F RM +L P+ T C+ +LG+
Sbjct: 54 VFLFNTTIRGFSRARRPGSLLSSVLLFVRMGV-LSLAPNNFTFTFLFQGCSNCVAFDLGR 112
Query: 211 EIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+ H I E + N+++ Y CG L++AR +FDE +V+ W SM+ G + G
Sbjct: 113 QFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNG 172
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
+ +A LF + R+ + W MI+GY Q + EA+ALFREMQ++ +P+ ILV++L+
Sbjct: 173 NILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLS 232
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C+QLGAL+ G W+H YI + + VD++++ ALI+MYAKCG I+ A++ F R++D ++
Sbjct: 233 ACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSA 292
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
+T+ I GLAMNG +AL+LF QM G PD +++I VL ACSH G V++G +F +M+
Sbjct: 293 YTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMS 352
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+V+ I+P+L+HY C++DLLGRAGLL+EAE+ + +P + + +I +GALL ACR+YGN
Sbjct: 353 DVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVI---WGALLGACRVYGNA 409
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+MG+++ +LL + + + LL+NIYA + + ED VR+ M+ V +VPGCS IE+
Sbjct: 410 EMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEV 469
Query: 570 NGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
G +HEF GD SH + +EIY M + + K +
Sbjct: 470 AGFVHEFFSGDRSHEKTEEIYLMWEEIVKEI 500
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 207/489 (42%), Gaps = 101/489 (20%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP-CLLAYNLL 59
M Q K+ Q+ GL P +L ++ F G++ YA + +P + +N
Sbjct: 1 MKQFKEAHTQLIINGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTT 60
Query: 60 IKAFAKK---GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
I+ F++ GS S+LLF ++ ++P+NFT+ F+F+ G + HG V+K
Sbjct: 61 IRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIK 120
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
E D +V NSI+ Y V G++ + + +FDE + DVVSWN I G ++ +A+ +
Sbjct: 121 NSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSL 180
Query: 177 FRRMRQ----GCNLM--------------------------PDEGTVVSTLSACTALKNL 206
F +M + N+M P+ +VS LSAC+ L L
Sbjct: 181 FSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGAL 240
Query: 207 ELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
+ G +H YI ++ + I+ AL+DMY KCG + A + F ++V +T+ +SG
Sbjct: 241 DHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGL 300
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G E EA+ LF +M+ + PD +
Sbjct: 301 AMNGCSE-------------------------------EALQLFEQMKGEGISPDGVSYI 329
Query: 326 ALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
A+L C+ G +E+G + + + I + ++++ + GL+E+A E
Sbjct: 330 AVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEA--------E 381
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
K AS KPD++ + +L AC G + G+R
Sbjct: 382 KFVASMP--------------------------IKPDNVIWGALLGACRVYGNAEMGQRV 415
Query: 445 FNTMTEVYQ 453
+ + E Q
Sbjct: 416 GSLLVESDQ 424
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 152/329 (46%), Gaps = 30/329 (9%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+GN+L A +F + +++N++I +A+ G +++L LF +++ P++ V
Sbjct: 171 NGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSV 230
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + G VH Y+ K + D+ + +++DMY G I + F +DV
Sbjct: 231 LSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDV 290
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG----- 209
++ +ISG E+A+ +F +M+ G + PD + ++ L AC+ +E G
Sbjct: 291 SAYTAAISGLAMNGCSEEALQLFEQMK-GEGISPDGVSYIAVLCACSHAGWVEKGFHYFA 349
Query: 210 --KEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK--NVICWTSMVSG- 264
++H I EL+ M +D+ + G L EA + MP K NVI W +++
Sbjct: 350 SMSDVHG-IRPELDHYACM----VDLLGRAGLLEEAEKFVASMPIKPDNVI-WGALLGAC 403
Query: 265 --YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
Y N ++ L S + + N Y + + ++A + + M+ R K D+
Sbjct: 404 RVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMR--RRKVDR- 460
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENR 351
+ GC+ +E ++H + + +R
Sbjct: 461 -----VPGCS---LIEVAGFVHEFFSGDR 481
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/511 (37%), Positives = 292/511 (57%), Gaps = 40/511 (7%)
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
DN++ + V G ++H VK GL DT+V N++++MY + +
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 147 DEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
D P D VSWN I+G++ A+ F +M +G +M D+ T+++ L AC
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKG-QVMLDDVTLLNALVACARTC 210
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+++GK H + E MG++L+ MY KCG + +AR +FD MP++N +CWTSM+S
Sbjct: 211 MMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMIS 270
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
GY GQ + EA+ LFR+MQI +K D
Sbjct: 271 GYTQLGQSK-------------------------------EAIKLFRDMQIAGVKVDDAT 299
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ +++ C Q+GAL+ G+++H Y + + + D V +LI+MY+KCG I+KA +IF +
Sbjct: 300 ISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMV 359
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGR 442
++D SWT +I G A NG +AL+LF+QM GG P++ITF+GVL++CSHGGLV++G
Sbjct: 360 KRDNFSWT-VIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGY 418
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
R F+ M+ +Y I P++EHYGC++DLLGRA LL EAE+ I+++P + + ++ +LL A
Sbjct: 419 RHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAV---MWRSLLFA 475
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
CR G V + E +A ++ +E LL+ +YA+ +RW D VR + K P
Sbjct: 476 CRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTKQP 535
Query: 563 GCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
GCS IE++G +HEF GD SH E + IYS L
Sbjct: 536 GCSFIEVDGCVHEFFAGDESHFETEAIYSTL 566
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 194/413 (46%), Gaps = 53/413 (12%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ A ++GL + LN L+ C++PS + G+ + +++N +I
Sbjct: 114 QLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDT---VSWNTIIAG 170
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ G K+L FS++ + V D+ T A +K G+ H +V G E +
Sbjct: 171 YIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEIN 230
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
Y+ +S++ MY G++ + +++FD MPD++ V W ISG+ + + ++A+ +FR M Q
Sbjct: 231 CYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDM-Q 289
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLS 241
+ D+ T+ + +S+C + L+LG+ +H Y + L + N+L+DMY KCG +
Sbjct: 290 IAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIK 349
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+A ++F CG ++ RD WT +I G+
Sbjct: 350 KAYDIF--------------------CGMVK-----------RDNFSWT-VIMGFAANGL 377
Query: 302 FDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LF +M + + P++ + +LT C+ G +EQ GY + +R++ +A
Sbjct: 378 SGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQ-----GYRHFHRMSSIYGIAP 432
Query: 361 ------ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKA 406
++++ + L+ +A + E+ DA W S++ G++ A
Sbjct: 433 RIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLA 485
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/587 (35%), Positives = 334/587 (56%), Gaps = 26/587 (4%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIF----------GSIQSPCLL 54
+I A++ G +N K++V L +A +F G ++ P L
Sbjct: 31 KIHARLITTGFIKNSNLTTKIVVAFADSRRPYLAEFARYVFREYHVCSFAPGDVKDPFL- 89
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
+NL+IK+ + R++LL F + E G+S D F++ V KA LG +K G ++HG++
Sbjct: 90 -WNLVIKSHSHGVDPRRALLWFCLMLENGISVDKFSFSLVLKACSRLGFLKGGMQIHGFL 148
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
KTG+ D ++ N ++ +Y G + +++FD MP +D VS+N I G++KC E A
Sbjct: 149 RKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLIESAR 208
Query: 175 DVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLD 232
++F +LMP E ++S S + G I + E+ E I N+L+
Sbjct: 209 ELF-------DLMPREMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIY 261
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
Y K G + +A++LF MP ++V+ W +M+ GY G + KA+ LFD+ P RD+V + +M
Sbjct: 262 GYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSM 321
Query: 293 INGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+ GYVQ EA+ +F +M+ L PD+ LV +L+ AQLG L + +H YI E +
Sbjct: 322 MAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAMDMHLYIVEKQ 381
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + ALI+MY+KCG I++A+ +F + K W ++I GLA++G A +
Sbjct: 382 FYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIGGLAIHGLGESAFNILL 441
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
++ +PD ITF+GVL+ACSH GLV EG F M ++I+P+L+HYGC++DLL R
Sbjct: 442 EIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDLLSRC 501
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G ++ A+ LI ++P E N++I + L+AC + ++GE +A L + S +
Sbjct: 502 GSIELAKNLIEEMPIEPNDVI---WRTFLTACNHHKEFEIGELVAKHLILQAGYNPSSYV 558
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
LL+N+YAS RW+DV NVR MKE ++KVPGCS IE++G +HEF V
Sbjct: 559 LLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWIELDGRVHEFFV 605
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 190/560 (33%), Positives = 326/560 (58%), Gaps = 8/560 (1%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
+A + F + ++++N++I A ++ G R++L L ++ +GV D+ TY A
Sbjct: 212 HAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACA 271
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L + G+++H V+++ + D YV ++++++Y G K++F+ + D++ VSW V
Sbjct: 272 RLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV 331
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRY-IN 217
I G ++ F +V++F +MR LM D+ + + +S C +L LG+++H +
Sbjct: 332 LIGGSLQYECFSKSVELFNQMR--AELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLK 389
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
++ N+L+ +Y KCG L A +F M ++++ WTSM++ Y G + KAR+
Sbjct: 390 SGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREF 449
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGA 336
FD R+ + W AM+ Y+Q ++ + ++ M + + PD V L GCA +GA
Sbjct: 450 FDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGA 509
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G I G+ + + ++ VA A I MY+KCG I +A ++F L KD SW ++I G
Sbjct: 510 NKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITG 569
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+ +G +A + F M+S GAKPD I+++ VLS CSH GLV EG+ +F+ MT V+ I P
Sbjct: 570 YSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISP 629
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
LEH+ C++DLLGRAG L EA++LI K+P + ++GALLSAC+I+GN ++ E A
Sbjct: 630 GLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT---AEVWGALLSACKIHGNDELAELAA 686
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+ +++S DS + LLA IY+ A + +D VR+ M++ G++K PG S +E+ +H F
Sbjct: 687 KHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVF 746
Query: 577 LVGDPSHSEMKEIYSMLDRM 596
D SH ++ I + +D +
Sbjct: 747 KADDVSHPQVIAIRNKMDEL 766
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 173/346 (50%), Gaps = 7/346 (2%)
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD-EMPDK 152
++ G G + +HG +V GL ++ N+++ Y G + + ++L ++ +
Sbjct: 26 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 85
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQ-----GCNLMPDEGTVVSTLSACTALKNLE 207
+V++ N+ ++G+ K DA ++F RM + LM D + +C AL E
Sbjct: 86 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRE 145
Query: 208 LGKEI-HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
L ++ + + P + AL+DM+ +CG + A LF ++ + C SM++GY
Sbjct: 146 LAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYA 205
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
++ A + F+ RD+V W MI Q R EA+ L EM ++ D +
Sbjct: 206 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 265
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LT CA+L +L GK +H + + +D VA+ALIE+YAKCG ++A +F L++++
Sbjct: 266 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 325
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+ SWT +I G +K++ELF+QM + D ++S C
Sbjct: 326 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 222/497 (44%), Gaps = 79/497 (15%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIF-GSIQSPCLLAYNLLIKAF 63
+ + ++ +GL N L+ + S G L A ++ I+ P ++ +N+++ +
Sbjct: 40 RALHGRLVTVGLASAVFLQNTLLH--AYLSCGALSDARRLLRADIKEPNVITHNIMMNGY 97
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG-WL--------------------- 101
AK+GS + LF ++ R V+ N + G W+
Sbjct: 98 AKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKF 157
Query: 102 ---GEVKKGEKVHGYVVKTG-----------LEFDTYVC-NSIMDMYGVLGKICNVKKLF 146
G+ + V+ G +E T C NS++ Y L I + + F
Sbjct: 158 DFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYF 217
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKN 205
++M ++DVVSWN+ I+ + R +A+ + M R+G L D T S+L+AC L +
Sbjct: 218 EDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRL--DSTTYTSSLTACARLFS 275
Query: 206 LELGKEIHRYINQEL-EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
L GK++H + + L + P + +AL+++Y KCG EA+ +F+ + ++N + W
Sbjct: 276 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW------ 329
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
T +I G +Q+ F ++V LF +M+ + D+F L
Sbjct: 330 -------------------------TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 364
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
L++GC L G+ +H ++ VV+ +LI +YAKCG ++ A +F + E
Sbjct: 365 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 424
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
+D SWTS+I + G I KA E F M A + IT+ +L A G ++G +
Sbjct: 425 RDIVSWTSMITAYSQIGNIIKAREFFDGM----ATRNAITWNAMLGAYIQHGAEEDGLKM 480
Query: 445 FNTMTEVYQIQPKLEHY 461
++ M + P Y
Sbjct: 481 YSAMLSQKDVTPDWVTY 497
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 207/480 (43%), Gaps = 68/480 (14%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A++ + Q +P + L+ + G+ A+++F S+Q +++ +LI
Sbjct: 280 KQLHAKVIRSLPQIDPYVASALIEL--YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSL 337
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ F KS+ LF+++R ++ D F + ++ G ++H +K+G
Sbjct: 338 QYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIV 397
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH------VKCMRF-------- 170
V NS++ +Y G + N + +F M ++D+VSW I+ + +K F
Sbjct: 398 VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRN 457
Query: 171 -----------------EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE-I 212
ED + ++ M ++ PD T V+ C + +LG + I
Sbjct: 458 AITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII 517
Query: 213 HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+ L + NA + MY KCG +SEA++LFD + K+V+ W +M++GY G +
Sbjct: 518 GHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGK 577
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+A FD +M KPD VA+L+GC+
Sbjct: 578 QAAKTFD-------------------------------DMLSKGAKPDYISYVAVLSGCS 606
Query: 333 QLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS-W 390
G +++GK + + I+ + ++++ + G + +A ++ ++ K A W
Sbjct: 607 HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVW 666
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+++ ++G ++ EL ++ + PD +++ + S G D+ + M +
Sbjct: 667 GALLSACKIHGN-DELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 725
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 152/377 (40%), Gaps = 65/377 (17%)
Query: 184 CNLMPDEGT--VVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCL 240
C L+P T + L +C + L + +H R + L + N LL Y CG L
Sbjct: 12 CRLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGAL 71
Query: 241 SEARELFD-EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
S+AR L ++ NVI M++GY G L A +LFDR P RD+ W +++
Sbjct: 72 SDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMS----- 126
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
D C LG E + G + D V
Sbjct: 127 --------------------DTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVE 166
Query: 360 TALIEMYAKCGL-------------------------------IEKALEIFYELREKDAA 388
TAL++M+ +CG I+ A+E F ++ E+D
Sbjct: 167 TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVV 226
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
SW +I L+ +G++ +AL L +M G + D T+ L+AC+ + G++
Sbjct: 227 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLH--- 283
Query: 449 TEVYQIQPKLEHY--GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+V + P+++ Y LI+L + G EA+ + + + N+ L G L
Sbjct: 284 AKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFS 343
Query: 507 GNVDMGEKLAALLEKIE 523
+V++ ++ A L I+
Sbjct: 344 KSVELFNQMRAELMAID 360
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 176/491 (35%), Positives = 305/491 (62%), Gaps = 8/491 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+K+H ++VK L +++ ++D+ G+ LF + D + +N I +
Sbjct: 31 KKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHN 90
Query: 168 MRFEDAVDVFRRM---RQGCN-LMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEF 222
+ A+ V+++M G N + PD+ T + +C L +LGK++H ++ + +
Sbjct: 91 KVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKS 150
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
++ N+L++MY KC L +A +F+EM ++ + W +++SG+V GQ+ +AR +F+
Sbjct: 151 NTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQ 210
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+ I WTA+++GY + + +A+ FR MQ++ ++PD+ LV++L CAQLGALE GKW
Sbjct: 211 DKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKW 270
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH Y ++ + V ALIEMYAKCG I++ +F +++E+D SW+++I GLA +G+
Sbjct: 271 IHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGR 330
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+A+ELF +M +P ITF+G+L+AC+H GL++EG R+F +M Y I+P +EHYG
Sbjct: 331 AREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYG 390
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
CL++LLG +G LD+A EL++K+P + + P++G+LLS+CR +GN+ + L ++
Sbjct: 391 CLVNLLGLSGRLDQALELVKKMPRKPDS---PIWGSLLSSCRSHGNLKIAVIAMEHLLEL 447
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E D+ + LL+N+YA +W+ V+ +R+ M+ ++K PGCSSIE++ ++ EF GD S
Sbjct: 448 EPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDS 507
Query: 583 HSEMKEIYSML 593
K I +L
Sbjct: 508 KPFSKAICRVL 518
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 214/446 (47%), Gaps = 73/446 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LK+I A I + L Q+ + K++ C H +G YA +F + P YN +I
Sbjct: 27 IVELKKIHAHIVKFSLSQSSFLVTKMVDVCNH--YGETEYANLLFKGVADPNAFLYNAMI 84
Query: 61 KAFAKKGSFRKSLLLFSKLR-----ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+A+ + ++ ++ ++ E + PD FT+PFV K+ L G++VHG+V
Sbjct: 85 RAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVF 144
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR---- 169
K G + +T V NS+++MY + + ++F+EM ++D VSWN ISGHV+ MR
Sbjct: 145 KFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARA 204
Query: 170 -------------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+ DA++ FRRM Q + PDE ++VS L C L
Sbjct: 205 IFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRM-QMVGIEPDEISLVSVLPDCAQLG 263
Query: 205 NLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
LELGK IH Y ++ I + NAL++MY KCG + + R LFD+M ++VI W++M+
Sbjct: 264 ALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIV 323
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G N G R EA+ LF+EMQ +++P
Sbjct: 324 GLANHG-------------------------------RAREAIELFQEMQKAKIEPSIIT 352
Query: 324 LVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
V LLT CA G L +G ++ + I L+ + G +++ALE+ ++
Sbjct: 353 FVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKM 412
Query: 383 -REKDAASWTSIICGLAMNGKINKAL 407
R+ D+ W S++ +G + A+
Sbjct: 413 PRKPDSPIWGSLLSSCRSHGNLKIAV 438
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 143/301 (47%), Gaps = 11/301 (3%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F+ +++ + N L+ H G + A IF +Q + ++ ++ +A+ G +
Sbjct: 173 RVFEEMTERDAVSWNTLI--SGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCY 230
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+L F +++ G+ PD + V LG ++ G+ +H Y K G + VCN++
Sbjct: 231 ADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNAL 290
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
++MY G I ++LFD+M ++DV+SW+ I G R +A+++F+ M Q + P
Sbjct: 291 IEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEM-QKAKIEPS 349
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELF 247
T V L+AC L G + ++ P + + L+++ G L +A EL
Sbjct: 350 IITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELV 409
Query: 248 DEMPNK-NVICWTSMVSGYVNCGQLEKA----RDLFDRSPVRDIVLWTAMINGYVQFNRF 302
+MP K + W S++S + G L+ A L + P D + + N Y ++
Sbjct: 410 KKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPA-DTGNYVLLSNLYADLGKW 468
Query: 303 D 303
D
Sbjct: 469 D 469
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/589 (32%), Positives = 339/589 (57%), Gaps = 15/589 (2%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
+A ++F S+ ++++N+++ A ++ G R++L + ++ +GV D+ TY A
Sbjct: 242 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 301
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L ++ G+++H V++ D YV ++++++Y G K +F+ + D++ V+W V
Sbjct: 302 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 361
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRYINQ 218
ISG ++ F ++V++F +MR LM D+ + + +S C + +L LG+++H +
Sbjct: 362 LISGFLQYGCFTESVELFNQMR--AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLK 419
Query: 219 ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ ++ N+L+ MY KC L A +F M K+++ WTSM++ Y G + KAR+
Sbjct: 420 SGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREF 479
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGA 336
FD ++++ W AM+ Y+Q ++ + +++ M ++PD V L GCA LGA
Sbjct: 480 FDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGA 539
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G I G + + +D VA A+I MY+KCG I +A ++F L KD SW ++I G
Sbjct: 540 NKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 599
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+ +G +A+E+F ++ GAKPD I+++ VLS CSH GLV EG+ +F+ M + I P
Sbjct: 600 YSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISP 659
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
LEH+ C++DLLGRAG L EA++LI +P + ++GALLSAC+I+GN ++ E A
Sbjct: 660 GLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPT---AEVWGALLSACKIHGNNELAELAA 716
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+ +++S DS + L+A IYA A + +D +R+ M++ G++K PG S +E++ +H F
Sbjct: 717 KHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVF 776
Query: 577 LVGDPSHSEMKEIYSMLD-------RMAKTLLDSKQNAMEGDNLVAINF 618
D SH ++ I LD R+ DS ++ + +A+ F
Sbjct: 777 KADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSEKLAVAF 825
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 197/387 (50%), Gaps = 12/387 (3%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N +++ Y LG++ + +LF MP +DV SWN +SG+ + ++ +++ F M + +
Sbjct: 95 NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 154
Query: 187 MPDEGTVVSTLSACTALK----NLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
P+ T+ + +C AL L+L + ++ +Q+ + AL+DM+ +CG +
Sbjct: 155 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQD---DSEVAAALVDMFVRCGAVDL 211
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A LF + + C SM++GYV ++ A +LFD P RD+V W M++ Q R
Sbjct: 212 ASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRV 271
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ + +MQ ++ D + LT CA+L +L GK +H + N +D VA+AL
Sbjct: 272 REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASAL 331
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
+E+YAK G ++A +F L +++ +WT +I G G +++ELF+QM + D
Sbjct: 332 VELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 391
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
++S C + GR+ + + QIQ + LI + + L AE + R
Sbjct: 392 FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFR 450
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNV 509
+ NE + + ++++A GNV
Sbjct: 451 FM----NEKDIVSWTSMITAYSQVGNV 473
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 216/476 (45%), Gaps = 69/476 (14%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P + ++ + G L A ++FG + + + ++N L+ + + + SL F
Sbjct: 88 HPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLS 147
Query: 79 LRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
+ G S P+ FT K+ G LG ++ V K + D+ V +++DM+ G
Sbjct: 148 MHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCG 207
Query: 138 KI----------------C---------------NVKKLFDEMPDKDVVSWNVSISGHVK 166
+ C + +LFD MP++DVVSWN+ +S +
Sbjct: 208 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 267
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPI 225
R +A+D+ M Q + D T S+L+AC L +L GK++H + + L P
Sbjct: 268 SGRVREALDMVVDM-QSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ +AL+++Y K GC EA+ +F+ + ++N + WT ++SG
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG--------------------- 365
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
++Q+ F E+V LF +M+ + D+F L L++GC L G+ +H
Sbjct: 366 ----------FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHS 415
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
++ VV+ +LI MYAKC ++ A IF + EKD SWTS+I + G + K
Sbjct: 416 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAK 475
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A E F M ++ + IT+ +L A G ++G R + M ++P Y
Sbjct: 476 AREFFDGM----SEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTY 527
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 38/311 (12%)
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELF-DEMPNKNVICWTSMVSGYVNCGQLE 272
R + L + N LL Y CG LS+AR L ++ + NVI M++GY G+L
Sbjct: 49 RLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLS 108
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK-PDKFILVALLTGC 331
A +LF R P RD+ W +++GY Q ++ ++ F M P+ F L + C
Sbjct: 109 DAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSC 168
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL-------------------- 371
LG + + + D+ VA AL++M+ +CG
Sbjct: 169 GALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRN 228
Query: 372 -----------IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
++ ALE+F + E+D SW ++ L+ +G++ +AL++ M S G +
Sbjct: 229 SMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRL 288
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAE 478
D T+ L+AC+ + G++ +V + P ++ Y L++L ++G EA+
Sbjct: 289 DSTTYTSSLTACARLSSLRWGKQLH---AQVIRNLPHIDPYVASALVELYAKSGCFKEAK 345
Query: 479 ELIRKIPNENN 489
+ + + NN
Sbjct: 346 GVFNSLHDRNN 356
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI + ++GL + N V + G +L A K+F + ++++N +I +++
Sbjct: 545 QIIGRTVKVGLIIDTSVANA--VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 602
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG-------EKVHGYVVKTG 118
G ++++ +F + +RG PD +Y V G V++G ++ H + G
Sbjct: 603 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHN--ISPG 660
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
LE + C ++D+ G G + K L D+MP K
Sbjct: 661 LEH--FSC--MVDLLGRAGHLTEAKDLIDDMPMK 690
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 190/560 (33%), Positives = 326/560 (58%), Gaps = 8/560 (1%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
+A + F + ++++N++I A ++ G R++L L ++ +GV D+ TY A
Sbjct: 222 HAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACA 281
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L + G+++H V+++ + D YV ++++++Y G K++F+ + D++ VSW V
Sbjct: 282 RLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV 341
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRY-IN 217
I G ++ F +V++F +MR LM D+ + + +S C +L LG+++H +
Sbjct: 342 LIGGSLQYECFSKSVELFNQMR--AELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLK 399
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
++ N+L+ +Y KCG L A +F M ++++ WTSM++ Y G + KAR+
Sbjct: 400 SGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREF 459
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGA 336
FD R+ + W AM+ Y+Q ++ + ++ M + + PD V L GCA +GA
Sbjct: 460 FDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGA 519
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G I G+ + + ++ VA A I MY+KCG I +A ++F L KD SW ++I G
Sbjct: 520 NKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITG 579
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+ +G +A + F M+S GAKPD I+++ VLS CSH GLV EG+ +F+ MT V+ I P
Sbjct: 580 YSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISP 639
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
LEH+ C++DLLGRAG L EA++LI K+P + ++GALLSAC+I+GN ++ E A
Sbjct: 640 GLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT---AEVWGALLSACKIHGNDELAELAA 696
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+ +++S DS + LLA IY+ A + +D VR+ M++ G++K PG S +E+ +H F
Sbjct: 697 KHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVF 756
Query: 577 LVGDPSHSEMKEIYSMLDRM 596
D SH ++ I + +D +
Sbjct: 757 KADDVSHPQVIAIRNKMDEL 776
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 162/307 (52%), Gaps = 1/307 (0%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N +M+ Y G + + ++LFD MP +DV SWN +SG+ + RF D ++ F M + +
Sbjct: 75 NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDS 134
Query: 187 MPDEGTVVSTLSACTALKNLELGKEI-HRYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
+P+ T + +C AL EL ++ + + P + AL+DM+ +CG + A
Sbjct: 135 LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASR 194
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
LF ++ + C SM++GY ++ A + F+ RD+V W MI Q R EA
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ L EM ++ D + LT CA+L +L GK +H + + +D VA+ALIE+
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
YAKCG ++A +F L+++++ SWT +I G +K++ELF+QM + D
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 426 IGVLSAC 432
++S C
Sbjct: 375 ATLISGC 381
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 235/536 (43%), Gaps = 71/536 (13%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
+ P + ++ + G+L AE++F + + ++N L+ + + F L F
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 78 KLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK-------------------- 116
+ G S P+ FT+ V K+ G LG + ++ G K
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 117 ----------TGLEFDTYVC-NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+ +E T C NS++ Y L I + + F++M ++DVVSWN+ I+
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 166 KCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFT 223
+ R +A+ + M R+G L D T S+L+AC L +L GK++H + + L +
Sbjct: 247 QSGRVREALGLVVEMHRKGVRL--DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
P + +AL+++Y KCG EA+ +F+ + ++N + W
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW------------------------- 339
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
T +I G +Q+ F ++V LF +M+ + D+F L L++GC L G+ +
Sbjct: 340 ------TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQL 393
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H ++ VV+ +LI +YAKCG ++ A +F + E+D SWTS+I + G I
Sbjct: 394 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 453
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
KA E F M A + IT+ +L A G ++G + ++ M + P Y
Sbjct: 454 IKAREFFDGM----ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
L G +++I + V + A ++ G + +KL LL
Sbjct: 510 LFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 160/368 (43%), Gaps = 39/368 (10%)
Query: 192 TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFD-E 249
+ L +C + L + +H R + L + N LL Y CG LS+AR L +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
+ NVI M++GY G L A +LFDR P RD+ W +++GY Q RF + + F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 310 REMQIIRLK-PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
M P+ F ++ C LG E + G + D V TAL++M+ +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 369 CGL-------------------------------IEKALEIFYELREKDAASWTSIICGL 397
CG I+ A+E F ++ E+D SW +I L
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+ +G++ +AL L +M G + D T+ L+AC+ + G++ +V + P+
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLH---AKVIRSLPQ 302
Query: 458 LEHY--GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
++ Y LI+L + G EA+ + + + N+ L G L +V++ ++
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362
Query: 516 AALLEKIE 523
A L I+
Sbjct: 363 RAELMAID 370
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 209/667 (31%), Positives = 341/667 (51%), Gaps = 77/667 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ + G + N L++ + G A +F +I ++++N L +
Sbjct: 30 KQVHGIVVVTGFDSDEFVANSLVIL--YAKCGGFGDARSLFDAIPDRSVVSWNALFSCYV 87
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+++ LF + G+ P+ F+ + L + +G K+HGY++K G + D +
Sbjct: 88 HSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAF 147
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
N+++DMY +G + + +FDE+ D+VSWN I+G V A+++ R M +
Sbjct: 148 SANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKS- 206
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+ P+ T+ S L AC + ELG+++H I ++ +G L+DMY KC + +A
Sbjct: 207 GMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDA 266
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL----------FDRSPVRDIV------ 287
R +F MP +++I W +++SG+ + E+A L F+++ + ++
Sbjct: 267 RLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAAL 326
Query: 288 -----------------------LWTAMINGYVQFNRFDEAVALFREMQIIRL------- 317
+ ++I+ Y + ++A +F E I+ L
Sbjct: 327 QANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLV 386
Query: 318 ------------------------KPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
KPD F+ +LL CA L A EQGK +H +I +
Sbjct: 387 TAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFM 446
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
D +L+ MYAKCG IE A F + + SW+++I GLA +G +AL+LF QM
Sbjct: 447 SDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQM 506
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
+ G P+ IT + VL AC+H GLV E + +FN+M ++ I+P EHY C+IDLLGRAG
Sbjct: 507 LKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGK 566
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L+ A EL+ K+P + N ++ +GALL A RI+ N+D+GE+ A +L +E + S H LL
Sbjct: 567 LEAAMELVNKMPFQANALV---WGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLL 623
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
ANIYAS W+ V VR+ MK+ V+K PG S +E+ ++ F+VGD SHS EIY+ L
Sbjct: 624 ANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKL 683
Query: 594 DRMAKTL 600
D ++ L
Sbjct: 684 DELSDLL 690
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 220/491 (44%), Gaps = 67/491 (13%)
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV 142
G+ + F +P V KA ++ G++VHG VV TG + D +V NS++ +Y G +
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
+ LFD +PD+ VVSWN S +V +AV +F M + P+E ++ S ++ CT
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLS-GIRPNEFSLSSMINVCTG 123
Query: 203 LKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L++ G++IH Y I + NAL+DMY K G L +A +FDE+ +++ W
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW--- 180
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
A+I G V A+ L REM + P+
Sbjct: 181 ----------------------------NAIIAGCVLHEYHHRALELLREMNKSGMCPNM 212
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
F L + L CA + E G+ +H + + + D+ + LI+MY+KC ++ A +F
Sbjct: 213 FTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKL 272
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS-------- 433
+ E+D +W ++I G + N + +A LF M + G + T VL + +
Sbjct: 273 MPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMC 332
Query: 434 ---HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
H + G F N + LID G+ G +++A + + P
Sbjct: 333 RQIHALSLKSGFEFDNYVVN------------SLIDTYGKCGHVEDATRVFEESPI---- 376
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK----DSSFHTLLANIYASANRWEDV 546
+ + L+ +L++A Y GE+ L +++ + DS + L N AS + +E
Sbjct: 377 VDLVLFTSLVTA---YAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQG 433
Query: 547 TNVRQKMKEMG 557
V + + G
Sbjct: 434 KQVHVHILKFG 444
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M ++ +K ++F ++L C L GK +HG + D VA +L+ +YAKCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
A +F + ++ SW ++ + +A+ LF M+ G +P++ + +++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 432 CSHGGLVD--EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
C+ GL D +GR+ + ++ L+D+ + G+L++A + +I +
Sbjct: 121 CT--GLEDSVQGRKIHGYLIKLGYDSDAFS-ANALVDMYAKVGILEDASSVFDEIAKPD- 176
Query: 490 EIIVPLYGALLSACRIY 506
+ + A+++ C ++
Sbjct: 177 ---IVSWNAIIAGCVLH 190
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/589 (32%), Positives = 339/589 (57%), Gaps = 15/589 (2%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
+A ++F S+ ++++N+++ A ++ G R++L + ++ +GV D+ TY A
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L ++ G+++H V++ D YV ++++++Y G K +F+ + D++ V+W V
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRYINQ 218
ISG ++ F ++V++F +MR LM D+ + + +S C + +L LG+++H +
Sbjct: 342 LISGFLQYGCFTESVELFNQMR--AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLK 399
Query: 219 ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ ++ N+L+ MY KC L A +F M K+++ WTSM++ Y G + KAR+
Sbjct: 400 SGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREF 459
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGA 336
FD ++++ W AM+ Y+Q ++ + +++ M ++PD V L GCA LGA
Sbjct: 460 FDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGA 519
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G I G + + +D VA A+I MY+KCG I +A ++F L KD SW ++I G
Sbjct: 520 NKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITG 579
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+ +G +A+E+F ++ GAKPD I+++ VLS CSH GLV EG+ +F+ M + I P
Sbjct: 580 YSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISP 639
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
LEH+ C++DLLGRAG L EA++LI +P + ++GALLSAC+I+GN ++ E A
Sbjct: 640 GLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPT---AEVWGALLSACKIHGNNELAELAA 696
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
+ +++S DS + L+A IYA A + +D +R+ M++ G++K PG S +E++ +H F
Sbjct: 697 KHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVF 756
Query: 577 LVGDPSHSEMKEIYSMLD-------RMAKTLLDSKQNAMEGDNLVAINF 618
D SH ++ I LD R+ DS ++ + +A+ F
Sbjct: 757 KADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSEKLAVAF 805
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 197/387 (50%), Gaps = 12/387 (3%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N +++ Y LG++ + +LF MP +DV SWN +SG+ + ++ +++ F M + +
Sbjct: 75 NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 134
Query: 187 MPDEGTVVSTLSACTALK----NLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
P+ T+ + +C AL L+L + ++ +Q+ + AL+DM+ +CG +
Sbjct: 135 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQD---DSEVAAALVDMFVRCGAVDL 191
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A LF + + C SM++GYV ++ A +LFD P RD+V W M++ Q R
Sbjct: 192 ASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRV 251
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ + +MQ ++ D + LT CA+L +L GK +H + N +D VA+AL
Sbjct: 252 REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASAL 311
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
+E+YAK G ++A +F L +++ +WT +I G G +++ELF+QM + D
Sbjct: 312 VELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 371
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
++S C + GR+ + + QIQ + LI + + L AE + R
Sbjct: 372 FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFR 430
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNV 509
+ NE + + ++++A GNV
Sbjct: 431 FM----NEKDIVSWTSMITAYSQVGNV 453
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 216/476 (45%), Gaps = 69/476 (14%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P + ++ + G L A ++FG + + + ++N L+ + + + SL F
Sbjct: 68 HPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLS 127
Query: 79 LRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
+ G S P+ FT K+ G LG ++ V K + D+ V +++DM+ G
Sbjct: 128 MHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCG 187
Query: 138 KI----------------C---------------NVKKLFDEMPDKDVVSWNVSISGHVK 166
+ C + +LFD MP++DVVSWN+ +S +
Sbjct: 188 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPI 225
R +A+D+ M Q + D T S+L+AC L +L GK++H + + L P
Sbjct: 248 SGRVREALDMVVDM-QSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ +AL+++Y K GC EA+ +F+ + ++N + WT ++SG
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG--------------------- 345
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
++Q+ F E+V LF +M+ + D+F L L++GC L G+ +H
Sbjct: 346 ----------FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHS 395
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
++ VV+ +LI MYAKC ++ A IF + EKD SWTS+I + G + K
Sbjct: 396 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAK 455
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A E F M ++ + IT+ +L A G ++G R + M ++P Y
Sbjct: 456 AREFFDGM----SEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTY 507
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 38/311 (12%)
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELF-DEMPNKNVICWTSMVSGYVNCGQLE 272
R + L + N LL Y CG LS+AR L ++ + NVI M++GY G+L
Sbjct: 29 RLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLS 88
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK-PDKFILVALLTGC 331
A +LF R P RD+ W +++GY Q ++ ++ F M P+ F L + C
Sbjct: 89 DAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSC 148
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL-------------------- 371
LG + + + D+ VA AL++M+ +CG
Sbjct: 149 GALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRN 208
Query: 372 -----------IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
++ ALE+F + E+D SW ++ L+ +G++ +AL++ M S G +
Sbjct: 209 SMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRL 268
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAE 478
D T+ L+AC+ + G++ +V + P ++ Y L++L ++G EA+
Sbjct: 269 DSTTYTSSLTACARLSSLRWGKQLH---AQVIRNLPHIDPYVASALVELYAKSGCFKEAK 325
Query: 479 ELIRKIPNENN 489
+ + + NN
Sbjct: 326 GVFNSLHDRNN 336
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI + ++GL + N V + G +L A K+F + ++++N +I +++
Sbjct: 525 QIIGRTVKVGLIIDTSVANA--VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 582
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG-------EKVHGYVVKTG 118
G ++++ +F + +RG PD +Y V G V++G ++ H + G
Sbjct: 583 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHN--ISPG 640
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
LE + C ++D+ G G + K L D+MP K
Sbjct: 641 LEH--FSC--MVDLLGRAGHLTEAKDLIDDMPMK 670
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 201/607 (33%), Positives = 339/607 (55%), Gaps = 43/607 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++I + + G + + + +N L+ + G++ A +F + + +++N +I +
Sbjct: 227 REIHVHVIRYGFESDVDVVNALITM--YVKCGDVNTARLVFDKMPNRDRISWNAMISGYF 284
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + L LF + + V PD T V A LG+ + G ++HGYV++T D
Sbjct: 285 ENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPS 344
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ NS++ MY +G I + +F +D+VSW ISG+ C+ + A++ ++ M +
Sbjct: 345 IHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMM-EAE 403
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEA 243
+MPDE T+ LSAC+ L NL++G +H Q+ L I+ N+L+DMY KC C+
Sbjct: 404 GIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCI--- 460
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+KA ++F + ++IV WT++I G NR
Sbjct: 461 ----------------------------DKALEIFHSTLEKNIVSWTSIILGLRINNRCF 492
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ FREM I RLKP+ LV +L+ CA++GAL GK IH + ++ D + A++
Sbjct: 493 EALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAIL 551
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MY +CG +E A + F+ + + + SW ++ G A GK A ELF +M+ P+++
Sbjct: 552 DMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEV 610
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFI +L ACS G+V EG +FN+M Y I P L+HY C++DLLGR+G L+EA E I+K
Sbjct: 611 TFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQK 670
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + + + +GALL++CRI+ +V++GE A + + ++ ++ LL+N+YA +W
Sbjct: 671 MPMKPDPAV---WGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKW 727
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+ V VR+ M++ G+ PGCS +E+ G +H FL D H ++KEI ++L+R K +
Sbjct: 728 DKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKM--- 784
Query: 604 KQNAMEG 610
K+ +EG
Sbjct: 785 KEAGVEG 791
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 222/408 (54%), Gaps = 34/408 (8%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GNL+ A +FG ++ L ++N+L+ +AK G F ++L L+ ++ GV PD +T+P V
Sbjct: 155 GNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVL 214
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ G + + +G ++H +V++ G E D V N+++ MY G + + +FD+MP++D +
Sbjct: 215 RTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRI 274
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN ISG+ + + + +F M + + PD T+ S ++AC L + LG++IH Y
Sbjct: 275 SWNAMISGYFENGVCLEGLRLFGMMIKY-PVDPDLMTMTSVITACELLGDDRLGRQIHGY 333
Query: 216 I-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ E P + N+L+ MY G + EA +F ++++ WT+M+SGY NC +K
Sbjct: 334 VLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK- 392
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
A+ ++ M+ + PD+ + +L+ C+ L
Sbjct: 393 ------------------------------ALETYKMMEAEGIMPDEITIAIVLSACSCL 422
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
L+ G +H + + ++VA +LI+MYAKC I+KALEIF+ EK+ SWTSII
Sbjct: 423 CNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSII 482
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
GL +N + +AL F +MI KP+ +T + VLSAC+ G + G+
Sbjct: 483 LGLRINNRCFEALFFFREMIR-RLKPNSVTLVCVLSACARIGALTCGK 529
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 35/297 (11%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELF 247
++ V+ + C + + G ++ Y++ + + +GNALL M+ + G L +A +F
Sbjct: 105 EDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVF 164
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
G++EK R+LF W ++ GY + FDEA+
Sbjct: 165 ---------------------GRMEK-RNLFS---------WNVLVGGYAKAGLFDEALD 193
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
L+ M + +KPD + +L C + L +G+ IH ++ D V ALI MY
Sbjct: 194 LYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYV 253
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG + A +F ++ +D SW ++I G NG + L LF MI PD +T
Sbjct: 254 KCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTS 313
Query: 428 VLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
V++AC G GR+ + + P + + LI + GL++EAE + +
Sbjct: 314 VITACELLGDDRLGRQIHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIEEAETVFSR 368
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 35/281 (12%)
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
D A++ M +R+ + VAL+ C A ++G ++ Y++ + + + A
Sbjct: 87 LDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNA 146
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L+ M+ + G + A +F + +++ SW ++ G A G ++AL+L+ +M+ G KPD
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPD 206
Query: 422 DITFIGVLSACSHGGLVDEGR-RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
TF VL C GG+ + R R + Y + ++ LI + + G ++ A +
Sbjct: 207 VYTFPCVLRTC--GGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264
Query: 481 IRKIPNEN----NEII------------VPLYG---------------ALLSACRIYGNV 509
K+PN + N +I + L+G ++++AC + G+
Sbjct: 265 FDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD 324
Query: 510 DMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNV 549
+G ++ + + E +D S H L +Y+S E+ V
Sbjct: 325 RLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETV 365
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/536 (36%), Positives = 298/536 (55%), Gaps = 42/536 (7%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+++ VH ++ L ++ + +M Y L + + +K+FDE+P+++V+ NV I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
+V + + V VF M GCN+ PD T L AC+ + +G++IH + L
Sbjct: 114 SYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN----------CGQL 271
T +GN L+ MY KCG LSEAR + DEM ++V+ W S+V GY C ++
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 272 EKAR---------------------------DLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
E + D+F + + +V W MI Y++ E
Sbjct: 233 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
AV L+ M+ +PD + ++L C AL GK IHGYI ++ + ++ ALI+
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MYAKCG +EKA ++F ++ +D SWT++I +G+ A+ LFS++ G PD I
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ L+ACSH GL++EGR F MT+ Y+I P+LEH C++DLLGRAG + EA I+ +
Sbjct: 413 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
E NE + +GALL ACR++ + D+G A L ++ + S ++ LL+NIYA A RWE
Sbjct: 473 SMEPNERV---WGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWE 529
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+VTN+R MK G++K PG S++E+N IIH FLVGD SH + EIY LD + K +
Sbjct: 530 EVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 230/513 (44%), Gaps = 70/513 (13%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L+ + ++I L+ N KLM + S ++ A K+F I ++ N++I+++
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMR--AYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G + + + +F + V PD++T+P V KA G + G K+HG K GL
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N ++ MYG G + + + DEM +DVVSWN + G+ + RF+DA++V R M +
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ES 234
Query: 184 CNLMPDEGTVVSTLSAC--TALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+ D GT+ S L A T +N+ K++ + ++ + + N ++ +Y K
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK---SLVSWNVMIGVYMKNAMPV 291
Query: 242 EARELFDEM------PN---------------------------------KNVICWTSMV 262
EA EL+ M P+ N++ +++
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
Y CG LEKARD+F+ RD+V WTAMI+ Y R +AVALF ++Q L PD
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYE 381
V L C+ G LE+G+ + ++ +IT ++++ + G +++A +
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 382 LR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
+ E + W +++ G + T IG+L+A L E
Sbjct: 472 MSMEPNERVWGALL---------------------GACRVHSDTDIGLLAADKLFQLAPE 510
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
++ ++ +Y + E + +++ GL
Sbjct: 511 QSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 195/536 (36%), Positives = 298/536 (55%), Gaps = 42/536 (7%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+++ VH ++ L ++ + +M Y L + + +K+FDE+P+++V+ NV I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
+V + + V VF M GCN+ PD T L AC+ + +G++IH + L
Sbjct: 114 SYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN----------CGQL 271
T +GN L+ MY KCG LSEAR + DEM ++V+ W S+V GY C ++
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 272 EKAR---------------------------DLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
E + D+F + + +V W MI Y++ E
Sbjct: 233 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
AV L+ M+ +PD + ++L C AL GK IHGYI ++ + ++ ALI+
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MYAKCG +EKA ++F ++ +D SWT++I +G+ A+ LFS++ G PD I
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ L+ACSH GL++EGR F MT+ Y+I P+LEH C++DLLGRAG + EA I+ +
Sbjct: 413 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
E NE + +GALL ACR++ + D+G A L ++ + S ++ LL+NIYA A RWE
Sbjct: 473 SMEPNERV---WGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWE 529
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+VTN+R MK G++K PG S++E+N IIH FLVGD SH + EIY LD + K +
Sbjct: 530 EVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 230/513 (44%), Gaps = 70/513 (13%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L+ + ++I L+ N KLM + S ++ A K+F I ++ N++I+++
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMR--AYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G + + + +F + V PD++T+P V KA G + G K+HG K GL
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N ++ MYG G + + + DEM +DVVSWN + G+ + RF+DA++V R M +
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ES 234
Query: 184 CNLMPDEGTVVSTLSAC--TALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+ D GT+ S L A T +N+ K++ + ++ + + N ++ +Y K
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK---SLVSWNVMIGVYMKNAMPV 291
Query: 242 EARELFDEM------PN---------------------------------KNVICWTSMV 262
EA EL+ M P+ N++ +++
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
Y CG LEKARD+F+ RD+V WTAMI+ Y R +AVALF ++Q L PD
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYE 381
V L C+ G LE+G+ + ++ +IT ++++ + G +++A +
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 382 LR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
+ E + W +++ G + T IG+L+A L E
Sbjct: 472 MSMEPNERVWGALL---------------------GACRVHSDTDIGLLAADKLFQLAPE 510
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
++ ++ +Y + E + +++ GL
Sbjct: 511 QSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 209/590 (35%), Positives = 335/590 (56%), Gaps = 27/590 (4%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKL-MVFCTHPSHGNLLYAEKIF-----------GSIQSP 51
+ +I A++ GL +N ++ + F P +A +F G ++ P
Sbjct: 31 VSKIHARLITTGLIKNSNLSTRIVLAFAASPRPYLAEFARLVFREYHVCSSSPGGEVEDP 90
Query: 52 CLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVH 111
L +N +IK+ + +++LLLF + E GVS D F+ V KA LG VK G ++H
Sbjct: 91 FL--WNAVIKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGLQIH 148
Query: 112 GYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE 171
G + KTGL D ++ N ++ +Y G + +++FD MP +D VS+N I G+VK E
Sbjct: 149 GILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIE 208
Query: 172 DAVDVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNA 229
A ++F +LMP E ++S S + G +I + E+ E I N+
Sbjct: 209 SARELF-------DLMPREVKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNS 261
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
++D Y K G + +A++LFD MP ++V+ W +M+ GY G + +A+ LFD+ P RD+V +
Sbjct: 262 MIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSY 321
Query: 290 TAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
+M+ GYVQ EA+ +F +M+ L PD+ LV +L+ AQLG L + +H YI
Sbjct: 322 NSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIV 381
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
E + + + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G A +
Sbjct: 382 EKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFD 441
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
+ Q+ KPDDITF+GVL+ACSH GLV EG F M ++I+P+L+HYGC++D+L
Sbjct: 442 MLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 501
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
R+G ++ A+ LI+++P E N++I + L+AC + + GE + L + S
Sbjct: 502 SRSGSIELAKNLIQEMPIEPNDVI---WRTFLTACNHHKEFETGELVGKHLILQAGYNPS 558
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ LL+N+YAS +W+DV +R MKE + K+PGCS IE++G +HEF V
Sbjct: 559 SYVLLSNMYASFGKWKDVRRIRTMMKERKIEKIPGCSWIELDGRVHEFFV 608
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 190/498 (38%), Positives = 309/498 (62%), Gaps = 15/498 (3%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMY-----GVLGKICNV----KKLFDEMPDKDVVSWNVS 160
+HG++++T L D +V + ++ + K N+ +F ++ + ++ +NV
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFSQIQNPNLFVFNVL 90
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
I A + +M + + PD T + A T ++ + +G++ H I +
Sbjct: 91 IRCFSTGAEPSKAFGFYTQMLKS-RIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFG 149
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ + N+L+ MY CG ++ A +F +MP ++V+ WTSMV+GY CG +E AR++FD
Sbjct: 150 FQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFD 209
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P R++ W+ MINGY + N F++A+ LF M+ + ++ ++V++++ CA LGALE
Sbjct: 210 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEF 269
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G+ H Y+ ++ +TV+ ++ TAL++MY +CG IEKA+ +F EL +KD+ SW+SII GLA+
Sbjct: 270 GERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAV 329
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G +KA+ FSQM+ G P DIT VLSACSHGGLVD+G + M Y I+P+LE
Sbjct: 330 HGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLE 389
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGC++D+LGRAG L EAE I K+P + N P+ GALL AC+IY N ++ E++ +L
Sbjct: 390 HYGCIVDMLGRAGKLAEAENFILKMPVKPN---APILGALLGACKIYKNTEVAERVGNML 446
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+++ + S ++ LL+NIYA A +WE + ++R MKE V+K PG S IEI+G I++F +G
Sbjct: 447 IEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMG 506
Query: 580 -DPSHSEMKEIYSMLDRM 596
D H EM +I + + +
Sbjct: 507 DDQKHPEMGKIKRLWEEI 524
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 161/315 (51%), Gaps = 40/315 (12%)
Query: 37 NLL-YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
NLL YA IF IQ+P L +N+LI+ F+ K+ ++++ + + PDN T+PF+
Sbjct: 67 NLLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 126
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA + V GE+ H +V+ G + D YV NS++ MY G I ++F +MP +DVV
Sbjct: 127 KASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVV 186
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM----------------RQGC--------NLMPDEG 191
SW ++G+ KC EDA ++F M + C LM EG
Sbjct: 187 SWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREG 246
Query: 192 TV------VSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEAR 244
V VS +S+C L LE G+ H Y + + I+G AL+DMY +CG + +A
Sbjct: 247 VVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAI 306
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR------SPVRDIVLWTAMINGYVQ 298
+F+E+P+K+ + W+S++ G G KA F + SP RDI L TA+++
Sbjct: 307 RVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSP-RDITL-TAVLSACSH 364
Query: 299 FNRFDEAVALFREMQ 313
D+ + ++ M+
Sbjct: 365 GGLVDKGLEIYENMK 379
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F + L+++ +IK A G K++ FS++ G SP + T V
Sbjct: 300 GEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVL 359
Query: 96 KAVGWLGEVKKGEKVHGYVVKT-GLE--FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
A G V KG +++ + + G+E + Y C I+DM G GK+ + +MP K
Sbjct: 360 SACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGC--IVDMLGRAGKLAEAENFILKMPVK 417
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/503 (38%), Positives = 303/503 (60%), Gaps = 12/503 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVL--GKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++ H V+K+GL +V + +++ G + + KLF + + +N I +
Sbjct: 22 KQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMIKALL 81
Query: 166 KCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFT 223
F +A+ VF + R G + PD T+ L A + N+ LG+ IH I
Sbjct: 82 LRGEFLNAIAVFSAIFRNG--IHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVN 139
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+GN+LL MY + AR++FDEMP + + WT M+ GY N G ++ AR+LFD + V
Sbjct: 140 EFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMATV 199
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+D +W AMI+GYVQ N F E + +FR MQ+ ++PD+ I+V +L+ CA +GAL+ G WI
Sbjct: 200 KDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWI 259
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H Y+ + + V+T LI+MYAKCG ++ A +F E+ ++D W ++I G+AM+G
Sbjct: 260 HRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDG 319
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
A++LF +M G KPD+ITFI V ACS+ G+VDEG R +N M+ V++I+PK EHYGC
Sbjct: 320 EGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGC 379
Query: 464 LIDLLGRAGLLDEAEELIRKIP---NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
+IDLL R G +EAE +I+++P + + E + + A LSAC +G E A L
Sbjct: 380 VIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVA--WRAFLSACCKHGQTQQAEVAAERLF 437
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++E + S + LL+N+YA+ + ED VR MK GV KVPGCSSI++NG+++EF+ G+
Sbjct: 438 QLE-RHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGE 496
Query: 581 PSHSEMKEIYSMLDRMAKTLLDS 603
+H + I+ +L+ + K ++++
Sbjct: 497 KTHRHIDNIHLVLEELNKQIVEA 519
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 211/444 (47%), Gaps = 70/444 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQ AQ+ + GL + L++L+ FC +G+L +A K+F IQ P + +N +I
Sbjct: 18 MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
KA +G F ++ +FS + G+ PD +T P+V KA + + GE +H +K G
Sbjct: 78 KALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSA 137
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV--------------------- 159
+ +V NS++ MY + + +++FDEMP+ VSW V
Sbjct: 138 VNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197
Query: 160 ----------SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
ISG+V+ F++ + +FR M Q + PDE +V+ LSAC + L+ G
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLM-QLTEVEPDEAIIVTILSACAHMGALDTG 256
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
IHRY+ + L T + L+DMY KCG L A+ LF+EM ++ +CW +M+SG
Sbjct: 257 IWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMD 316
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G E A+ LF EM+ +KPD +A+
Sbjct: 317 GDGEG-------------------------------AIKLFMEMEKAGIKPDNITFIAVW 345
Query: 329 TGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELRE--- 384
C+ G +++G I ++ ++I + +I++ ++ G E+A + L +
Sbjct: 346 XACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTAS 405
Query: 385 --KDAASWTSIICGLAMNGKINKA 406
++A +W + + +G+ +A
Sbjct: 406 PSEEAVAWRAFLSACCKHGQTQQA 429
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+ +I + + F++ L +F ++ V PD + A +G + G +H Y+
Sbjct: 205 WGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGIWIHRYLG 264
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
+ GL V ++DMY G + K LF+EM +D V WN ISG E A+
Sbjct: 265 RLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIK 324
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDM 233
+F M + + PD T ++ AC+ ++ G I ++ + P + ++D+
Sbjct: 325 LFMEMEKA-GIKPDNITFIAVWXACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDL 383
Query: 234 YCKCGCLSEARELFDEM-----PNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ G EA + + P++ + W + +S GQ ++A +R
Sbjct: 384 LSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAER 435
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A+ +F + + +N +I A G ++ LF ++ + G+ PDN T+ V+
Sbjct: 286 GHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVW 345
Query: 96 KAVGWLGEVKKGEKV---HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM--- 149
A G V +G ++ V K + + Y C ++D+ +G+ + + +
Sbjct: 346 XACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGC--VIDLLSRVGRFEEAEGVIQRLPKT 403
Query: 150 --PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
P ++ V+W +S K + + A R+ Q
Sbjct: 404 ASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLFQ 438
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 198/502 (39%), Positives = 298/502 (59%), Gaps = 22/502 (4%)
Query: 104 VKKGEKVHGYVVKTGLEFDT--------YVCNSIMDM-YGVLGKICNVKKLFDEMPDKDV 154
+++ +++H ++KTGL DT + C S DM Y L +F + K+
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYL--------VFTRINHKNP 89
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
WN I G + E A+ +F M ++ P T S A L G+++H
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 214 RYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+ +E LE + N +L MY CGCL EA +F M +V+ W SM+ G+ CG ++
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+A++LFD P R+ V W +MI+G+V+ RF +A+ +FREMQ +KPD F +V+LL CA
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA 269
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
LGA EQG+WIH YI NR ++++V TALI+MY KCG IE+ L +F +K + W S
Sbjct: 270 YLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNS 329
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
+I GLA NG +A++LFS++ G +PD ++FIGVL+AC+H G V FF M E Y
Sbjct: 330 MILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKY 389
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
I+P ++HY ++++LG AGLL+EAE LI+ +P E + +I + +LLSACR GNV+M
Sbjct: 390 MIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVI---WSSLLSACRKIGNVEMA 446
Query: 513 EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGI 572
++ A L+K++ ++ + LL+N YAS +E+ R MKE + K GCSSIE++
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 573 IHEFLVGDPSHSEMKEIYSMLD 594
+HEF+ +H + EIYS+LD
Sbjct: 507 VHEFISCGGTHPKSAEIYSLLD 528
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 210/443 (47%), Gaps = 71/443 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFC-THPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
M +LKQI A + + GL + T ++++ FC PS N YA +F I +N +
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN--YAYLVFTRINHKNPFVWNTI 95
Query: 60 IKAFAKKGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
I+ F++ ++ +F + V P TYP VFKA G LG+ + G ++HG V+K
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 118 GLEFDTYVCNSIMDMY---GVL----------------------------GKICNVKKLF 146
GLE D+++ N+++ MY G L G I + LF
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
DEMP ++ VSWN ISG V+ RF+DA+D+FR M++ ++ PD T+VS L+AC L
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK-DVKPDGFTMVSLLNACAYLGAS 274
Query: 207 ELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
E G+ IH YI E I+ AL+DMYCKCGC+ E +F+ P K + CW SM+ G
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
N G E+A DLF E++ L+PD +
Sbjct: 335 ANNGFEERAMDLFS-------------------------------ELERSGLEPDSVSFI 363
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELR- 383
+LT CA G + + + E + ++ T ++ + GL+E+A + +
Sbjct: 364 GVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPV 423
Query: 384 EKDAASWTSIICGLAMNGKINKA 406
E+D W+S++ G + A
Sbjct: 424 EEDTVIWSSLLSACRKIGNVEMA 446
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 300/537 (55%), Gaps = 17/537 (3%)
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY-- 133
+ +R +GV P+ FT+ F+ +A LG + VHG +V+ G D +V N++MD+Y
Sbjct: 98 YVAMRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYYR 157
Query: 134 ---GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
G G + +++FDEM DKDVVSWN + ++ A+ +F M E
Sbjct: 158 CGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAM--------PE 209
Query: 191 GTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
VVS + ++ + N ++ Y G + AR +FD M
Sbjct: 210 RNVVSWNTVVAGFARTGDMVTARTVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRM 269
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
K+V+ WT+MVS Y G L+ A++LFD PV+++V W AMI GY +R+DEA+ F+
Sbjct: 270 DQKDVVSWTAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQ 329
Query: 311 EMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
M + R +PD+ LV++++ CAQLG++E WI +I ++ + + ALI+M+AKC
Sbjct: 330 LMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLTVALGNALIDMFAKC 389
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
G + +A IFY++ + +WT++I G A NG +AL +++ M G + D FI L
Sbjct: 390 GDVGRAQSIFYKMETRCIITWTTMISGFAFNGLCREALLVYNNMCREGVELDGTVFIAAL 449
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
+AC+HGGL+ EG FN M E Y IQP++EHYGC++DLLGRAG L EA I +P E +
Sbjct: 450 AACTHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAILFIESMPLEPS 509
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
+I + LLS+C +GN ++ E ++ + ++E +SS+ L++N A RW+ V
Sbjct: 510 VVI---WVTLLSSCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIGA 566
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQN 606
R M+ G+ KVPG S I++ +HEFL D H KEIY +D + + ++Q
Sbjct: 567 RTSMRNWGIEKVPGSSLIQVGSEVHEFLAKDTRHERRKEIYETVDGLMALMRHTEQT 623
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 208/609 (34%), Positives = 345/609 (56%), Gaps = 50/609 (8%)
Query: 1 MTQLKQIQAQIFQIG-LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS--------IQSP 51
+T LK I + + G L P L +L++ + G+L A +F Q+P
Sbjct: 38 LTTLKLIHSSLSTRGFLLHTPHFLARLIIL--YSKLGDLHSARTLFDHRHHHHHGHTQAP 95
Query: 52 CLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA-VGWLGEVKKGEKV 110
N +++A+A G +++ L+ ++ GV +NFTYPFV K LG V GE V
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVF-GEVV 154
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
HG VV+TG D +V +++DMY G+I + ++FD M +DVV W I+ + + R
Sbjct: 155 HGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERP 214
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNAL 230
A+ +FR+M++ + DE T +S SA L + + +H Y A+
Sbjct: 215 LKALMLFRKMQEE-GFLGDEITAISVASAVGQLGDGRMAISVHGY-------------AV 260
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
L+ + +V S+V Y CG +E+AR +FDR R+ + W
Sbjct: 261 LNGFIG-----------------DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWN 303
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
+M++GY Q R +A++LF +MQ P+ + +++ C+ LG+ G+ +H ++ +
Sbjct: 304 SMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISS 363
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFY--ELREKDAASWTSIICGLAMNGKINKALE 408
++ +D + A+++MY KCG ++ A+E+F EL E+D +SW +I G ++G +ALE
Sbjct: 364 KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALE 423
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LFS+M G +P+DITF +LSACSH GL+DEGR+ F MT++ ++P+++HY C++D+L
Sbjct: 424 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDML 482
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG L+EA LI+KIP+ ++ ++GALL ACRI+GN ++GE A L ++E + +
Sbjct: 483 GRAGFLNEAFRLIKKIPSRPSD---EVWGALLLACRIHGNTELGEIAANNLFQLEPEHTG 539
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
++ L++NIYA++N+W++V VRQ MK G++K S IE +H F D S +E
Sbjct: 540 YYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 599
Query: 589 IYSMLDRMA 597
+Y ++ +A
Sbjct: 600 VYRKVESLA 608
>gi|302142752|emb|CBI19955.3| unnamed protein product [Vitis vinifera]
Length = 488
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 296/514 (57%), Gaps = 54/514 (10%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK-ICNV 142
V ++FT+ F+ K ++ G +HG ++K G +V NS++ Y + + +
Sbjct: 6 VEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSA 65
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
++F+EMP++DV+SWN IS ++ + A+ + +M P+ V C
Sbjct: 66 YRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKM-------PERNIVTWNSVVCGL 118
Query: 203 LK--NLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
K N+EL H Q + N+++ Y + G + A+ +F +MP K V+ WT+
Sbjct: 119 SKAGNMELA---HSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTA 175
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKP 319
M+SGY G L+ A ++F+ PV+++V W AMI+GYV + FD+A+ +F M I +P
Sbjct: 176 MISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRP 235
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D+ L+++L+ CA LG+LE GKWI+ YI +N++ + + ALI+M+AKCG +E A E+F
Sbjct: 236 DQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVF 295
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
+ + ++ +WT+++ GLA+NGK +A+ LF +M G KPDD+ FI VLSAC+HGGLV+
Sbjct: 296 HHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVE 355
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG+R F+ M + + I+P++EHYGC++DLLGRAG L+EA KI ++
Sbjct: 356 EGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEA-----KIMDQ------------ 398
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
E + S+ TL++N+ AS RWEDV + R M++ +
Sbjct: 399 -----------------------EPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRME 435
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
KVPGCSSI++ +HEFL D H + KEIY L
Sbjct: 436 KVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRAL 469
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M+ + ++ + F LL ALE G+ IHG I + V +L+ YA C
Sbjct: 1 MKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSE 60
Query: 372 -IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
+ A +F E+ E+D SW S+I G+I A+ L +M + + +T+ V+
Sbjct: 61 NLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKM----PERNIVTWNSVVC 116
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
S G ++ F M ++ + +I R G + A+ + ++P E
Sbjct: 117 GLSKAGNMELAHSVFEQMPLRNEVS-----WNSMISGYVRIGDVRAAQSIFYQMP----E 167
Query: 491 IIVPLYGALLSACRIYGNVDMGEKL 515
V + A++S G++ E +
Sbjct: 168 KTVVSWTAMISGYATNGDLKSAENI 192
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A+++F + C++ + ++ A G R+++ LF K+ G PD+ + V
Sbjct: 286 GDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVL 345
Query: 96 KAVGWLGEVKKGEKVHGYVVKT-GLE--FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
A G V++G++V +V+ G++ + Y C ++D+ G GK+ K + E +
Sbjct: 346 SACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGC--MVDLLGRAGKLEEAKIMDQEPSNP 403
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
++ ++S R+ED + MRQ + + C++ +++G +
Sbjct: 404 SYLTLVSNLSASFG--RWEDVLSFRVAMRQ---------QRMEKVPGCSS---IQVGNRV 449
Query: 213 HRYINQE 219
H ++ ++
Sbjct: 450 HEFLAKD 456
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 189/517 (36%), Positives = 310/517 (59%), Gaps = 12/517 (2%)
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
+ F +RE +N+ PF+ + + + +K++ ++ GL +++ ++D
Sbjct: 1 MAFHGIRE----VENYFIPFLQR----VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC 52
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
+ + +LF+++ + +V +N I + + D + +++++ + +PD T
Sbjct: 53 DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTF 112
Query: 194 VSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
+C +L + LGK++H ++ + F + NAL+DMY K L +A ++FDEM
Sbjct: 113 PFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE 172
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
++VI W S++SGY GQ++KA+ LF + IV WTAMI+GY + EA+ FREM
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
Q+ ++PD+ L+++L CAQLG+LE GKWIH Y V ALIEMY+KCG+I
Sbjct: 233 QLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+A+++F ++ KD SW+++I G A +G + A+E F++M KP+ ITF+G+LSAC
Sbjct: 293 SQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC 352
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SH G+ EG R+F+ M + YQI+PK+EHYGCLID+L RAG L+ A E+ + +P + + I
Sbjct: 353 SHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKI 412
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+G+LLS+CR GN+D+ L ++E +D + LLANIYA +WEDV+ +R+
Sbjct: 413 ---WGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKM 469
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
++ ++K PG S IE+N I+ EF+ GD S EI
Sbjct: 470 IRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 222/457 (48%), Gaps = 73/457 (15%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+ K+I A I GL Q+ + K++ FC ++ YA ++F + +P + YN +I+A
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQVSNPNVFLYNSIIRA 82
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + + ++ +L + PD FT+PF+FK+ LG G++VHG++ K G F
Sbjct: 83 YTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRF 142
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR------------ 169
N+++DMY + + K+FDEM ++DV+SWN +SG+ + +
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 170 -------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+ +A+D FR M Q + PDE +++S L +C L +LELGK
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREM-QLAGIEPDEISLISVLPSCAQLGSLELGK 261
Query: 211 EIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
IH Y + L+ T + NAL++MY KCG +S+A +LF +M K+VI W++M+SGY
Sbjct: 262 WIHLYAERRGFLKQTGVC-NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYH 320
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G A+ F EMQ ++KP+ + LL
Sbjct: 321 GNAHG-------------------------------AIETFNEMQRAKVKPNGITFLGLL 349
Query: 329 TGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-D 386
+ C+ +G ++G ++ + +I LI++ A+ G +E+A+EI + K D
Sbjct: 350 SACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPD 409
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ W S++ G ++ AL ++ +P+D+
Sbjct: 410 SKIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPEDM 444
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 323/639 (50%), Gaps = 78/639 (12%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H S + A +F I P ++ +N++I+ +A G F++S+ L+ + + GV+P NFT+
Sbjct: 51 HISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTF 110
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP- 150
PF+ KA L ++ G +H + GL D YV +++ MY G + + LF+ +
Sbjct: 111 PFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISH 170
Query: 151 -DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
D+D+V+WN I+ + +M+Q + P+ T+VS L L G
Sbjct: 171 QDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQA-GVTPNSSTLVSILPTIGQANALHQG 229
Query: 210 KEIHRYINQELEF-TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
K IH Y + F ++ ALLDMY KC L AR++F+ + KN +CW++M+ GYV
Sbjct: 230 KAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLH 289
Query: 269 GQLEKARDLFDR---------SPVR-------------------------------DIVL 288
+ A L+D +P D +
Sbjct: 290 DSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTV 349
Query: 289 WTAMINGYVQFNRFDEAVALFREM-------------------------------QIIRL 317
++I+ Y + D AV EM Q +
Sbjct: 350 GNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGI 409
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
P ++ALL C+ L AL+ G HGY T D + A+I+MY+KCG I + E
Sbjct: 410 APYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISRE 469
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
IF ++ +D SW ++I G ++G +AL LF ++ + G KPDD+T I VLSACSH GL
Sbjct: 470 IFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGL 529
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
V EG+ +F++M++ + I+P++ HY C++DLL RAG LDEA I+++P N V ++G
Sbjct: 530 VTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPN---VRIWG 586
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
ALL+ACR + N++MGE+++ ++ + + + L++NIY+S RW+D +R + G
Sbjct: 587 ALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHG 646
Query: 558 VRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+K PGCS +EI+G+IH F+ G SH + I L +
Sbjct: 647 YKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQEL 685
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 115/243 (47%), Gaps = 23/243 (9%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
T + +++ +++ AR +FD+ P +VLW MI Y F +++ L+ M + +
Sbjct: 45 TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT 104
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
P F LL C+ L AL+ G+ IH + + +++D V+TAL+ MYAKCG + +A +
Sbjct: 105 PTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTL 164
Query: 379 FYEL--REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
F + +++D +W ++I + + + + +QM G P+ T + +L
Sbjct: 165 FNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQAN 224
Query: 437 LVDEG--------RRFF--NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
+ +G R FF N + + L+D+ + LL A ++ +
Sbjct: 225 ALHQGKAIHAYYIRNFFFDNVVLQT-----------ALLDMYAKCHLLFYARKIFNTVNK 273
Query: 487 ENN 489
+N+
Sbjct: 274 KND 276
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ +R++ AT L + I+ A +F ++ + W +I A +G +++
Sbjct: 33 HPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSI 92
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
L+ M+ G P + TF +L ACS + G R +T + + L L+ +
Sbjct: 93 YLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLG-RLIHTHAHILGLSMDLYVSTALLHM 151
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
+ G L +A+ L I +++ +I+ + A+++A
Sbjct: 152 YAKCGHLYQAQTLFNSISHQDRDIVA--WNAMIAA 184
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 217/667 (32%), Positives = 344/667 (51%), Gaps = 77/667 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ G + + N L+V + G L + ++FG I ++++N L +
Sbjct: 102 RKVHGMAVVTGFESDGFVANTLVVM--YAKCGLLDDSRRLFGGIVERNVVSWNALFSCYV 159
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ +++ LF ++ G+ P+ F+ + A L E G K+HG ++K GL+ D +
Sbjct: 160 QSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQF 219
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
N+++DMY G+I +F ++ DVVSWN I+G V + A+ + M+ G
Sbjct: 220 SANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMK-GS 278
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI---------------------------- 216
P+ T+ S L AC A+ ELG+++H +
Sbjct: 279 GTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDA 338
Query: 217 NQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPNKNV----------------- 255
+ + P I NAL+ Y +CG +A LF +M ++++
Sbjct: 339 RRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASL 398
Query: 256 ----IC------------------WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
+C S++ Y C +++A +F+ D+V +T+MI
Sbjct: 399 QAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMI 458
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
Y Q+ +EA+ L+ +MQ +KPD FI +LL CA L A EQGK +H + +
Sbjct: 459 TAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFM 518
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
D + +L+ MYAKCG IE A F E+ + SW+++I G A +G +AL LF+QM
Sbjct: 519 CDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQM 578
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
+ G P+ IT + VL AC+H GLV+EG+++F M ++ I+P EHY C+IDLLGR+G
Sbjct: 579 LRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGK 638
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L+EA EL+ IP E + + +GALL A RI+ N+++G+K A +L +E + S H LL
Sbjct: 639 LNEAVELVNSIPFEADGFV---WGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLL 695
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
ANIYASA WE+V VR+ MK+ V+K PG S IEI ++ F+VGD SHS EIY+ L
Sbjct: 696 ANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKL 755
Query: 594 DRMAKTL 600
D++ L
Sbjct: 756 DQLGDLL 762
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 252/526 (47%), Gaps = 42/526 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ A + + G ++P N L+ + YA K+ +++++ L+ + +
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTL--YSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQ 59
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G ++LL+F+++ GV + FT+P V KA ++ G KVHG V TG E D +V
Sbjct: 60 NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGC 184
N+++ MY G + + ++LF + +++VVSWN S +V+ +AV +F+ M R G
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG- 178
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
+MP+E ++ L+AC L+ +LG++IH + L+ NAL+DMY K G + A
Sbjct: 179 -IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGA 237
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+F ++ + +V+ W ++++G V L DL
Sbjct: 238 VAVFQDIAHPDVVSWNAIIAGCV----LHDCNDL-------------------------- 267
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ L EM+ +P+ F L + L CA +G E G+ +H + + D A L+
Sbjct: 268 -ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MY+KC +++ A + + +KD +W ++I G + G A+ LFS+M S +
Sbjct: 327 DMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQT 386
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T VL + + + ++ +T++ I L+D G+ +DEA ++ +
Sbjct: 387 TLSTVLKSVASLQAIKVCKQ-IHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEE 445
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
E+ + Y ++++A YG+ + KL ++ + K F
Sbjct: 446 RTWED----LVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPF 487
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 175/365 (47%), Gaps = 36/365 (9%)
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+V+ Y C + AR L D S D+V W+++++GYVQ +EA+ +F EM ++ +K +
Sbjct: 22 LVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCN 81
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+F ++L C+ L G+ +HG D VA L+ MYAKCGL++ + +F
Sbjct: 82 EFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFG 141
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
+ E++ SW ++ + +A+ LF +M+ G P++ + +L+AC+ D
Sbjct: 142 GIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDL 201
Query: 441 GRRFFNTMTEVYQIQPKLEHYG--CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
GR+ M ++ L+ + L+D+ +AG ++ A + + I + + V + A
Sbjct: 202 GRKIHGLML---KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPD----VVSWNA 254
Query: 499 LLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+++ C ++ D+ L ++ ++ + F TL + + A A MG
Sbjct: 255 IIAGCVLHDCNDLALMLLDEMKGSGTRPNMF-TLSSALKACA--------------AMGF 299
Query: 559 RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT-LLDSKQNA---MEGDNLV 614
+ E+ +H L+ +HS++ ++D +K ++D + A M +++
Sbjct: 300 K--------ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDII 351
Query: 615 AINFL 619
A N L
Sbjct: 352 AWNAL 356
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 190/466 (40%), Positives = 279/466 (59%), Gaps = 11/466 (2%)
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEG 191
Y LG++ LF + V W I GH E A++ + +M QG P+
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVE--PNAF 76
Query: 192 TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T S L C +E GK +H + + + + LLD+Y + G + A++LFD M
Sbjct: 77 TFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 132
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
P K+++ T+M++ Y G+L+ AR LFD RD V W MI+GY Q +EA+ LFR
Sbjct: 133 PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFR 192
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
M + KP++ ++++L+ C QLGALE G+W+H YI N I + V TAL++MY+KCG
Sbjct: 193 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
+E A +F ++ +KD +W S+I G AM G +AL+LF M G P +ITFIG+LS
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
AC H G V EG FN M + Y I+PK+EHYGC+++LLGRAG +++A EL++ + E +
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 372
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+ L+G LL ACR++G + +GEK+ LL +S + LL+NIYA+ W+ V +R
Sbjct: 373 V---LWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLR 429
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
MK+ GV+K PGCSSIE+N +HEFL G +H + KEIY ML+ +
Sbjct: 430 TMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEI 475
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 193/407 (47%), Gaps = 70/407 (17%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
++ S G L Y+ +FG Q+P + + +I A +G ++L ++++ +GV P+ FT
Sbjct: 18 SYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFT 77
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
+ + K L ++ G+ +H VK G + D YV ++D+Y G + + ++LFD MP
Sbjct: 78 FSSILK----LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 151 DKDVVS-------------------------------WNVSISGHVKCMRFEDAVDVFRR 179
+K +VS WNV I G+ + +A+ +FRR
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M + P+E TV+S LSAC L LE G+ +H YI N ++F +G AL+DMY KCG
Sbjct: 194 MLK-AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L +AR +FD++ +K+V+ W SM+ GY + G+ Q
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYA--------------------------MXGFSQ 286
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAV 357
EA+ LF+ M + L P + +L+ C G + +G I + +E I
Sbjct: 287 -----EALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIE 341
Query: 358 VATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
++ + + G +E+A E+ + E D W +++ ++GKI
Sbjct: 342 HYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 388
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 142/293 (48%), Gaps = 11/293 (3%)
Query: 27 MVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSP 86
M+ C + HG L A +F ++ + +N++I + + G ++L+LF ++ + P
Sbjct: 143 MLTC-YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKP 201
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
+ T V A G LG ++ G VH Y+ G++F+ +V +++DMY G + + + +F
Sbjct: 202 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 261
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKN 205
D++ DKDVV+WN I G+ ++A+ +F+ M R G L P T + LSAC
Sbjct: 262 DKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMG--LHPTNITFIGILSACGHSGW 319
Query: 206 LELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMV 262
+ G +I + E P + + ++++ + G + +A EL M + + W +++
Sbjct: 320 VTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 379
Query: 263 SGYVNCGQL---EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
G++ EK +L + + + + N Y +D VA R M
Sbjct: 380 GACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWD-GVARLRTM 431
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 210/617 (34%), Positives = 331/617 (53%), Gaps = 50/617 (8%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F +++ + N ++ C S+ A ++F + + L+++N++I + +
Sbjct: 70 RLFNSMPRRSSISWNAMISGCL--SNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNL 127
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
R + LLF ++ ER V V W + G +GYV + FD C +
Sbjct: 128 RAARLLFDQMPERDV-------------VSW-NAMLSGYAQNGYVKEAKEIFDEMPCKNS 173
Query: 130 MDMYGVL------GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ- 182
+ G+L G+I + ++LF+ D +++SWN + G+VK R DA +F RM +
Sbjct: 174 ISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER 233
Query: 183 ---GCNLM--------------------PDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
N M P T ++N L E R +
Sbjct: 234 DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGML-DEARRVFDGM 292
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
E + NA++ Y +C + +ARELF+ MP +NV W +M++GY G + +AR+ FD
Sbjct: 293 PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFD 352
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
R P RD + W A+I GY Q +EA+ LF EM+ + ++ + L+ CA++ ALE
Sbjct: 353 RMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALEL 412
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK +HG + + + V AL+ MY KCG I+ A +F + EK+ SW ++I G A
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 472
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G +AL LF M G PDD+T +GVLSACSH GLVD+G +F +MT+ Y I +
Sbjct: 473 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSK 532
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY C+IDLLGRAG LD+A+ L++ +P E + +GALL A RI+GN ++GEK A ++
Sbjct: 533 HYTCMIDLLGRAGRLDDAQNLMKNMPFEPD---AATWGALLGASRIHGNTELGEKAAKMI 589
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E +S + LL+N+YA++ RW DV +R +M++ GV+KVPG S +E+ IH F VG
Sbjct: 590 FEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVG 649
Query: 580 DPSHSEMKEIYSMLDRM 596
D H E IY+ L+ +
Sbjct: 650 DSVHPERDRIYTFLEEL 666
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 186/387 (48%), Gaps = 29/387 (7%)
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVST 196
G+ + +LF+ MP + +SWN ISG C+ + D F RQ MP V
Sbjct: 63 GQCDSALRLFNSMPRRSSISWNAMISG---CL----SNDKFYLARQLFEKMPTRDLVSWN 115
Query: 197 --LSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
+S C +NL + + +Q E + NA+L Y + G + EA+E+FDEMP KN
Sbjct: 116 VMISGCVRYRNLRAARLL---FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN 172
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
I W M++ YV G++E AR LF+ +++ W M+ GYV+ NR +A +F M
Sbjct: 173 SISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMP- 231
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ D+ +++G AQ G L + + + E D TA++ Y + G++++
Sbjct: 232 ---ERDEVSWNTMISGYAQNGELLEAQ----RLFEESPVRDVFTWTAMVSGYVQNGMLDE 284
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
A +F + EK++ SW +II G ++++A ELF M ++ +++ +
Sbjct: 285 ARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVS----SWNTMITGYAQ 340
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP 494
G + + R FF+ M + I + +I ++G +EA L ++ + +
Sbjct: 341 NGDIAQARNFFDRMPQRDSIS-----WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 395
Query: 495 LYGALLSACRIYGNVDMGEKLAALLEK 521
+ + LS C +++G+++ + K
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVK 422
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 148/367 (40%), Gaps = 80/367 (21%)
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+ +++ W ++ ++ GQ + A LF+ P R + W AMI+G + ++F A LF +
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEK 105
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M D +++GC + L + + + E D V A++ YA+ G
Sbjct: 106 MPT----RDLVSWNVMISGCVRYRNLRAARLLFDQMPER----DVVSWNAMLSGYAQNGY 157
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF--------------------- 410
+++A EIF E+ K++ SW ++ NG+I A LF
Sbjct: 158 VKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKR 217
Query: 411 ---------------------SQMISGGAK----------------PDDITFIGVLSACS 433
+ MISG A+ D T+ ++S
Sbjct: 218 NRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYV 277
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
G++DE RR F+ M E + + +I + +D+A EL +P +N V
Sbjct: 278 QNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQN----V 328
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDS-SFHTLLANIYASANRWEDVTNVRQK 552
+ +++ G++ +++ +DS S+ ++A YA + E+ ++ +
Sbjct: 329 SSWNTMITGYAQNGDIAQARN---FFDRMPQRDSISWAAIIAG-YAQSGYGEEALHLFVE 384
Query: 553 MKEMGVR 559
MK G R
Sbjct: 385 MKRDGER 391
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 214/613 (34%), Positives = 332/613 (54%), Gaps = 54/613 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q ++I +GL QN KL+ C HP H L +F S+Q + +N LI
Sbjct: 43 RQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRL-----VFDSLQHKNVFLWNSLIN 97
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
K + ++ LF+++ V PD+FT + K LG + G+ +HG ++TG
Sbjct: 98 GCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVS 157
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV---KCMRFEDAVDVFR 178
DT V NSIM MY G +K+FDEM ++ SWNV I+G+ C E+ + +
Sbjct: 158 DTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217
Query: 179 RMRQGCNLMPDEGTVVSTLSACTA-LKNLELGKEIHRYINQE-----LEFTPIMGNALLD 232
+M+ + PD T+ S L C + + G+E+H YI + L+ +G L+D
Sbjct: 218 QMQMD-EVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLID 276
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY + NK V+ R +FDR R++ WTAM
Sbjct: 277 MYSR--------------SNKVVV-----------------GRRVFDRMKCRNVFSWTAM 305
Query: 293 INGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
INGYV+ DEA++LFR+MQ+I ++P++ LV++L C+ L G+ IHG+
Sbjct: 306 INGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKE 365
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELRE-KDAASWTSIICGLAMNGKINKALELF 410
+ + + ALI+MY+KCG ++ A +F + KDA SW+S+I G ++GK +A+ L+
Sbjct: 366 LNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLY 425
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M+ G +PD IT +G+LSAC GLV+EG ++++ Y I+P LE C++D+LGR
Sbjct: 426 DKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGR 485
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
AG LD A + I+ IP E + +GAL+S I+G+++M E L ++E K+ S +
Sbjct: 486 AGQLDRALDFIKAIPVEPGPSV---WGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNY 542
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
++N+YAS+ RW+ V VR+ MK+ +RKVPGCS I IN H F V D +H IY
Sbjct: 543 VSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIY 602
Query: 591 SMLDRMAKTLLDS 603
+MLD + T+ D+
Sbjct: 603 NMLDDLLLTMNDA 615
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 183/385 (47%), Gaps = 37/385 (9%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+K + H ++ GL ++++ ++ Y + + + +FD + K+V WN I+
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELE 221
G VK + +A +F +M +++PD+ T+ + + L L GK IH + I
Sbjct: 98 GCVKNRLYNEAFQLFNQMCSS-DVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFV 156
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
++ N+++ MYCKCG E+R++FDEM +N W +++GY
Sbjct: 157 SDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYA--------------- 201
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC-AQLGALEQG 340
++G F +E ++MQ+ ++PD + + +LL C +G + G
Sbjct: 202 -----------VSGNCNFR--EETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYG 248
Query: 341 KWIHGYINENRITV----DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ +H YI +N + + D + LI+MY++ + +F ++ ++ SWT++I G
Sbjct: 249 RELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMING 308
Query: 397 LAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
NG ++AL LF M + G +P+ ++ + VL ACS + GR+ ++
Sbjct: 309 YVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVR-KELN 367
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEEL 480
++ LID+ + G LD A +
Sbjct: 368 NEVSLCNALIDMYSKCGSLDSARRV 392
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 199/584 (34%), Positives = 318/584 (54%), Gaps = 42/584 (7%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
NP + N ++ C + G L A K+F + ++Y +I + FR++L +F
Sbjct: 334 NPISCN--IMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKD 391
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
+R GV P++ T V A GE+ +H +K +E V ++M Y +
Sbjct: 392 MRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSG 451
Query: 139 ICNVKKLFDEMP-------------------------------DKDVVSWNVSISGHVKC 167
+ ++LFD MP DKDV+SW I G++
Sbjct: 452 VGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILM 511
Query: 168 MRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
R +A+ ++R M R G L +E VV+ +SAC L + G ++H + + +
Sbjct: 512 NRLHEALVMYRAMLRSGLAL--NEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNF 569
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ ++ Y CG + A F+ ++ W ++VSG++ +++AR +FD P RD
Sbjct: 570 IQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERD 629
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+ W+ MI+GY Q ++ A+ LF +M +KP++ +V++ + A LG L++G+W H
Sbjct: 630 VFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHE 689
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK--DAASWTSIICGLAMNGKI 403
YI I ++ + ALI+MYAKCG I AL+ F ++R+K + W +IICGLA +G
Sbjct: 690 YICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHA 749
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
+ L++FS M KP+ ITFIGVLSAC H GLV+ GRR F M Y ++P ++HYGC
Sbjct: 750 SMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGC 809
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLLGRAGLL+EAEE+IR +P + + +I +G LL+ACR +G+V++GE+ A L +
Sbjct: 810 MVDLLGRAGLLEEAEEMIRSMPMKADIVI---WGTLLAACRTHGDVNIGERAAESLAGLA 866
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
LL+NIYA A RWEDV+ VR+ ++ + ++PGCS +
Sbjct: 867 PSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMERMPGCSGV 910
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 234/482 (48%), Gaps = 69/482 (14%)
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI-------------- 139
+ A+ + +G ++H V+K GL +T++ NS+++MY G I
Sbjct: 275 LVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLN 334
Query: 140 ---CNV--------------KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
CN+ +KLFD MPDK VS+ I G V+ F +A++VF+ MR
Sbjct: 335 PISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRS 394
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLS 241
++P++ T+V+ + AC+ + + IH I +E ++ L+ YC C +
Sbjct: 395 D-GVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVG 453
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
EAR LFD MP N++ W M++GY G ++ AR+LF+R P +D++ W MI+GY+ NR
Sbjct: 454 EARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNR 513
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
EA+ ++R M L ++ ++V L++ C +L A+ G +HG + + + T
Sbjct: 514 LHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTT 573
Query: 362 LIEMYAKCG-------------------------------LIEKALEIFYELREKDAASW 390
+I YA CG ++++A +IF ++ E+D SW
Sbjct: 574 IIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSW 633
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM-T 449
+++I G A + ALELF +M++ G KP+++T + V SA + G + EGR +
Sbjct: 634 STMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICN 693
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
E + L LID+ + G ++ A + +I + V + A++ +G+
Sbjct: 694 ESIPLNDNLR--AALIDMYAKCGSINSALQFFNQI--RDKTFSVSPWNAIICGLASHGHA 749
Query: 510 DM 511
M
Sbjct: 750 SM 751
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 172/396 (43%), Gaps = 65/396 (16%)
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VS++ S + + + +F R N E +VS L C++ G+++H
Sbjct: 237 VSFSSSTNASPHVQDPQHFIGIFCNARLHQNHYECELALVSALKYCSSSSQ---GRQLHS 293
Query: 215 YINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
+ + L + N+L++MY K G + +A+ LFD P N I MV GY GQL+
Sbjct: 294 LVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDN 353
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
AR LFD P + V +T MI G VQ F EA+ +F++M+ + P+ LV ++ C+
Sbjct: 354 ARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSH 413
Query: 334 LGALEQGKWIHGY-------------------------INENRITVDAVVATALIEM--- 365
G + + IH + E R D + L+
Sbjct: 414 FGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVM 473
Query: 366 ---YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
YAK GL++ A E+F + +KD SW ++I G + ++++AL ++ M+ G ++
Sbjct: 474 LNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNE 533
Query: 423 ITFIGVLSACS-----------HGGLVDEGRRFFN----TMTEVYQ-------------- 453
I + ++SAC HG +V +G +N T+ Y
Sbjct: 534 ILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEV 593
Query: 454 -IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ LE + L+ + ++D+A ++ +P +
Sbjct: 594 GAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERD 629
>gi|224056823|ref|XP_002299041.1| predicted protein [Populus trichocarpa]
gi|222846299|gb|EEE83846.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 208/566 (36%), Positives = 330/566 (58%), Gaps = 17/566 (3%)
Query: 55 AYNLLIKAFAKKGSFR-KSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+N LI+A+++ + K++L+++ ++ PDN+TYP + KA L G++VH
Sbjct: 41 TWNCLIRAYSRSPTAPIKAILVYNFFIKTCSTRPDNYTYPCLLKACSRLFTDSNGKQVHT 100
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+V+KTGL+ D YV N+++ YG +G + LFD MPD+DV SWN + + F +
Sbjct: 101 HVIKTGLDSDIYVQNALVHFYGSVGNSTDACFLFDRMPDRDVASWNSLMGIYNTNNSFTE 160
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTA--LKNLELGKEIHRYINQELEFTPIMG--N 228
+ +F+++ GC + D+ ++V LSAC ++ LE G+ +H Y+ ++ F + N
Sbjct: 161 VMVLFKKLMCGC-VKADKISLVIVLSACAQAQMEGLEYGRSVHGYV-IKVGFGCFLNVDN 218
Query: 229 ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
ALL+ Y KC + +A ++FDE ++ +V+ +T +++ YV G ++ ARD+FD +D V
Sbjct: 219 ALLNFYIKCKEIDDASKMFDEFVHEGDVVSYTILINAYVEMGLIDLARDVFDEIVDKDRV 278
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
LW M++ YV+ +EA+ LF +M + PD+ +V++L CA + L+ + +H +I
Sbjct: 279 LWNLMVHAYVKARCPNEALDLFEKMDSAGVIPDENTMVSVLLACASISDLQCARLLHRFI 338
Query: 348 NEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
N N + D + TALI MY+KCG +E+AL FY++ D +WT++I GLA NG N+A
Sbjct: 339 NRNSNVRQDVFLKTALITMYSKCGSVEEALVTFYKMEYTDVFTWTAMIEGLANNGYGNEA 398
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L +F++M + G +P++ T + VL+AC H GLV EG + F +M Y++Q K+EH+GCLID
Sbjct: 399 LSMFNRMENQGIRPNESTLVSVLTACIHSGLVKEGCQLFKSMVSDYKMQLKMEHFGCLID 458
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LL RAGLL +AEE I+ + E I Y LLSAC Y D G+K+A + K+ S
Sbjct: 459 LLSRAGLLHQAEEFIQLLLPEERLIA---YKTLLSACMKYSEFDFGKKVANEMSKLSSNS 515
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS---SIEINGIIHEFLVGDPSH 583
LL+N YA A +W V R+ +KE RK PG S S+E + E L+ S
Sbjct: 516 HETRILLSNFYALAGQWAQVAETRKFIKEFDTRKAPGMSFVDSVEAGHFVEEKLMFITSS 575
Query: 584 SEMKEIYSMLDRMAKTLLDSKQNAME 609
S + Y + R T S A +
Sbjct: 576 SVLT-FYQIATRCESTRATSNSKAQD 600
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 7/229 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F I + +NL++ A+ K ++L LF K+ GV PD T V A
Sbjct: 265 ARDVFDEIVDKDRVLWNLMVHAYVKARCPNEALDLFEKMDSAGVIPDENTMVSVLLACAS 324
Query: 101 LGEVKKGEKVHGYVVK-TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
+ +++ +H ++ + + + D ++ +++ MY G + F +M DV +W
Sbjct: 325 ISDLQCARLLHRFINRNSNVRQDVFLKTALITMYSKCGSVEEALVTFYKMEYTDVFTWTA 384
Query: 160 SISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
I G +A+ +F RM QG + P+E T+VS L+AC ++ G ++ + +
Sbjct: 385 MIEGLANNGYGNEALSMFNRMENQG--IRPNESTLVSVLTACIHSGLVKEGCQLFKSMVS 442
Query: 219 ELEFTPIMGN--ALLDMYCKCGCLSEARELFD-EMPNKNVICWTSMVSG 264
+ + M + L+D+ + G L +A E +P + +I + +++S
Sbjct: 443 DYKMQLKMEHFGCLIDLLSRAGLLHQAEEFIQLLLPEERLIAYKTLLSA 491
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 290/488 (59%), Gaps = 6/488 (1%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H ++K G + + + N+++D+YG G I +LFDEMP++D VSW ++ H K +
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMG 227
+ + M L PD + AC++L L LGK++H R++ ++
Sbjct: 84 IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK 143
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
++L+DMY KCG +AR +FD + KN + WTSM+SGY G+ +A DLF ++PVR++
Sbjct: 144 SSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLK-PDKFILVALLTGCAQLGALEQGKWIHGY 346
WTA+I+G +Q + +LF EM+ + D +L +++ GCA L LE GK IHG
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
+ ++ AL++MYAKC I A +IFY + KD SWTSII G A +GK +A
Sbjct: 264 VIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEA 323
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L L+ +M+ KP+++TF+G+L ACSH GLV GR F +MT Y I P L+HY CL+D
Sbjct: 324 LTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLD 383
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LL R+G LDEAE L+ KIP + +E P + +LLSAC + N++MG ++A + ++ +D
Sbjct: 384 LLSRSGHLDEAENLLDKIPFKPDE---PTWASLLSACMRHNNLEMGVRIADRVLDLKPED 440
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
S + LL+N+YA A W V+ VR+ M M VRK PG SSI+ F G+ M
Sbjct: 441 PSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPM 500
Query: 587 K-EIYSML 593
K EI ++L
Sbjct: 501 KNEICNLL 508
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 217/483 (44%), Gaps = 76/483 (15%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ +QI + G ++ N L+ + G + A ++F + + +++ ++ A K
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLD--VYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNK 81
Query: 66 KGSFRKSL-LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
R++L +L + G+ PD+F + + +A LG ++ G++VH + + D
Sbjct: 82 ALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEV 141
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM---- 180
V +S++DMY G+ + + +FD + K+ VSW ISG+ + R +A+D+F +
Sbjct: 142 VKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRN 201
Query: 181 ----------------------------RQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
R+G +++ D + S + C L LELGK+I
Sbjct: 202 LFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV-DPLVLSSVVGGCANLALLELGKQI 260
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H I E + NAL+DMY KC + A+++F MP K+VI WTS++ G G+
Sbjct: 261 HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
E EA+ L+ EM + R+KP++ V LL C
Sbjct: 321 E-------------------------------EALTLYDEMVLSRIKPNEVTFVGLLYAC 349
Query: 332 AQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-DAAS 389
+ G + +G+ + + I T L+++ ++ G +++A + ++ K D +
Sbjct: 350 SHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPT 409
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG----GLVDEGRRFF 445
W S++ + + + + +++ KP+D + +LS G G V + R+
Sbjct: 410 WASLLSACMRHNNLEMGVRIADRVLD--LKPEDPSTYILLSNVYAGAEMWGSVSKVRKLM 467
Query: 446 NTM 448
++M
Sbjct: 468 SSM 470
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA+ + +H I + ++++ L+++Y KCGLI +AL++F E+ +D SW
Sbjct: 13 CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72
Query: 391 TSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
SI+ + L + + M + G +PD F ++ ACS G + G++
Sbjct: 73 ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFM 132
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
+ ++ LID+ + G D+A + I +N+
Sbjct: 133 LSFFCDDEVVK-SSLIDMYTKCGQPDDARAVFDSILFKNS 171
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 206/638 (32%), Positives = 348/638 (54%), Gaps = 71/638 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLY-AEKIFGSIQSPCLLAYNLL 59
++Q KQ+ AQ+ +GL QNP +++L+ F T+ NLL A+ + S + L +NLL
Sbjct: 97 LSQGKQLHAQVISLGLDQNPILVSRLVNFYTNV---NLLVDAQFVTESSNTLDPLHWNLL 153
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I A+ + G F ++L ++ + + + PD +TYP V KA G + G +VH + + +
Sbjct: 154 ISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSM 213
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E+ +V N+++ MYG GK+ + LFD MP +D VSWN IS + +++A +F
Sbjct: 214 EWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGS 273
Query: 180 MRQ---------------GC------------------NLMPDEGTVVSTLSACTALKNL 206
M++ GC ++ D +V L+AC+ + +
Sbjct: 274 MQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAI 333
Query: 207 ELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
+LGKEIH G+A+ + ++FD + N ++++ Y
Sbjct: 334 KLGKEIH-------------GHAVRTCF----------DVFDNVKN-------ALITMYS 363
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
C L A LF R+ + ++ W AM++GY +R++E LFREM ++P+ + +
Sbjct: 364 RCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIAS 423
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELREK 385
+L CA++ L+ GK H YI +++ + ++ AL++MY++ G + +A ++F L ++
Sbjct: 424 VLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKR 483
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D ++TS+I G M G+ L+LF +M KPD +T + VL+ACSH GLV +G+ F
Sbjct: 484 DEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLF 543
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
M +V+ I P+LEHY C+ DL GRAGLL++A+E I +P + ++ LL ACRI
Sbjct: 544 KRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTS---AMWATLLGACRI 600
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+GN +MGE A L +++ S ++ L+AN+YA+A W + VR M+ +GVRK PGC+
Sbjct: 601 HGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPGCA 660
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+++ FLVGD S+ EIY ++D + + + D+
Sbjct: 661 WVDVGSEFSPFLVGDSSNPHASEIYPLMDGLNELMKDA 698
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 151/373 (40%), Gaps = 53/373 (14%)
Query: 195 STLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
S L ACT K+L GK++H + I+ L+ PI+ + L++ Y L +A+ + +
Sbjct: 86 SLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTL 145
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+ + W ++S YV NG+ F EA+ +++ M
Sbjct: 146 DPLHWNLLISAYVR--------------------------NGF-----FVEALCVYKNML 174
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+++PD++ ++L C + G +H I + + V AL+ MY + G +E
Sbjct: 175 NKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLE 234
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A +F + +D+ SW +II A G +A +LF M G + + I + + C
Sbjct: 235 IARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCL 294
Query: 434 HGGLVDEGRRFFNTMTEVYQIQP--------KLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
H G + + M + H G + LG+
Sbjct: 295 HSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAI--KLGKEIHGHAVRTCFDVFD 352
Query: 486 NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWED 545
N N +I + S CR D+G L + E K + + YA +R+E+
Sbjct: 353 NVKNALIT-----MYSRCR-----DLGHAF-ILFHRTEEKGLITWNAMLSGYAHMDRYEE 401
Query: 546 VTNVRQKMKEMGV 558
VT + ++M + G+
Sbjct: 402 VTFLFREMLQEGM 414
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 199/570 (34%), Positives = 319/570 (55%), Gaps = 9/570 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ A ++F +I P + LI A G +++ ++S L+ERG+ PD +
Sbjct: 112 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA G+ + ++VH + G+ D +V N+++ YG + +++FD++ +DVV
Sbjct: 172 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 231
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW S +VKC +DVFR M + P+ TV S L AC LK+L+ GKEIH +
Sbjct: 232 SWTSLSSCYVKCGFPRKGMDVFREMGWS-GVKPNPMTVSSILPACAELKDLKSGKEIHGF 290
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + + +AL+ +Y KC + EAR +FD MP+++V+ W +++ Y + EK
Sbjct: 291 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 350
Query: 275 RDLF---DRSPVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
LF R VR D W A+I G ++ R +EAV +FR+MQ + KP++ + ++L
Sbjct: 351 FSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPA 410
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C+ L GK IH Y+ + D TAL+ MYAKCG + + +F +R KD +W
Sbjct: 411 CSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 470
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I AM+G +AL LF +M+ +P+ +TF GVLS CSH LV+EG + FN+M
Sbjct: 471 NTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR 530
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
+ ++P HY C++D+ RAG L+EA + I+ +P E +GALL+ACR+Y NV+
Sbjct: 531 DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPT---ASAWGALLAACRVYKNVE 587
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+ + A L +IE + + L NI +A W + + VR MKE G+ K PGCS +++
Sbjct: 588 LAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVG 647
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+H F+VGD S+ E +IY+ LD + + +
Sbjct: 648 NKVHTFVVGDKSNIESDKIYNFLDELVEKM 677
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 136/315 (43%), Gaps = 20/315 (6%)
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
+N G +AR LFD P D + +I+ +EA+ ++ +Q +KPD + +
Sbjct: 109 LNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFL 168
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
A CA G + K +H + D V ALI Y KC +E A +F +L +
Sbjct: 169 AAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVR 228
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D SWTS+ G K +++F +M G KP+ +T +L AC+ + G+
Sbjct: 229 DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIH 288
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+ + L L+ L + + EA + +P+ + +V G L +
Sbjct: 289 GFAVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRD---VVSWNGVLTA---Y 341
Query: 506 YGNVDMGEKLAALL----EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK- 560
+ N + + + L + + + +++++ ++ + R E+ + +KM++MG +
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENG-RSEEAVEMFRKMQKMGFKPN 400
Query: 561 -------VPGCSSIE 568
+P CS E
Sbjct: 401 EITISSILPACSFSE 415
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI + G +A ++F + + D + +++I L +G N+A++++S + G KPD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 422 DITFIGVLSACSHGG 436
F+ AC+ G
Sbjct: 164 MPVFLAAAKACAVSG 178
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 270/430 (62%), Gaps = 5/430 (1%)
Query: 172 DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNAL 230
+A+ ++ M Q L PD T + AC G +H ++ + E + ++L
Sbjct: 149 EALPLYHTMLQS-GLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSL 207
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+ +Y L A++LF+ ++V+ W +M+ GYV ++ AR +FDR RD++ W
Sbjct: 208 IHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWN 267
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
MINGY + +EA+ALF +M+ + +KP + +V+LL+ CA LGAL++G +H YIN+N
Sbjct: 268 TMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN 327
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
RI V+++V TAL++MYAKCG I A ++F + KD +W +II G+A++G + +A +LF
Sbjct: 328 RIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLF 387
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M G +P+DITF+ +LSACSH G+VDEG++ + M+ Y I+PK+EHYGC+IDLL R
Sbjct: 388 KEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLAR 447
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
AG L+EA ELI +P E N + GALL CRI+GN ++GE + L ++ S +
Sbjct: 448 AGFLEEAMELIGTMPMEPNPSAL---GALLGGCRIHGNFELGEMVGKRLINLQPCHSGRY 504
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
LL+NIYA+A +W+D VR MK G+ KVPG S IE+ G++H F+ GD SH E +IY
Sbjct: 505 ILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIY 564
Query: 591 SMLDRMAKTL 600
L+ + L
Sbjct: 565 EKLNEIHTRL 574
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 218/441 (49%), Gaps = 79/441 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNP-ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ LKQ+ AQI I +P + + P L YA+ IF +Q+P YN L
Sbjct: 80 LRHLKQVHAQI--ITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSL 137
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA-----VGWLGEVKKGEKVHGYV 114
I+A + + ++L L+ + + G+ PD+ TYPFV KA V W G + VH +V
Sbjct: 138 IRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLL-----VHTHV 192
Query: 115 VKTGLEFDTYVCNSIMDMYG---------VLGKICNVKK--------------------- 144
VK+G E D+Y+ +S++ +Y L +C+ +
Sbjct: 193 VKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHAR 252
Query: 145 -LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
+FD M +DV+SWN I+G+ C + +A+ +F +MR + P E TVVS LSAC L
Sbjct: 253 MVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMR-AVGVKPTEATVVSLLSACAHL 311
Query: 204 KNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
L+ G +H YIN +E I+G AL+DMY KCG +S A ++F+ M +K+V+ W +++
Sbjct: 312 GALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTII 371
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
+G I+G V+ EA LF+EM+ ++P+
Sbjct: 372 AGMA--------------------------IHGNVK-----EAQQLFKEMKEAGVEPNDI 400
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYE 381
VA+L+ C+ G +++G+ + ++ + I +I++ A+ G +E+A+E+
Sbjct: 401 TFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGT 460
Query: 382 LR-EKDAASWTSIICGLAMNG 401
+ E + ++ +++ G ++G
Sbjct: 461 MPMEPNPSALGALLGGCRIHG 481
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/570 (34%), Positives = 319/570 (55%), Gaps = 9/570 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ A ++F +I P + LI A G +++ ++S L+ERG+ PD +
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA G+ + ++VH + G+ D +V N+++ YG + +++FD++ +DVV
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW S +VKC +DVFR M + P+ TV S L AC LK+L+ GKEIH +
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWS-GVKPNPMTVSSILPACAELKDLKSGKEIHGF 204
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + + +AL+ +Y KC + EAR +FD MP+++V+ W +++ Y + EK
Sbjct: 205 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 264
Query: 275 RDLF---DRSPVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
LF R VR D W A+I G ++ R +EAV +FR+MQ + KP++ + ++L
Sbjct: 265 FSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPA 324
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C+ L GK IH Y+ + D TAL+ MYAKCG + + +F +R KD +W
Sbjct: 325 CSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 384
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I AM+G +AL LF +M+ +P+ +TF GVLS CSH LV+EG + FN+M
Sbjct: 385 NTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR 444
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
+ ++P HY C++D+ RAG L+EA + I+ +P E +GALL+ACR+Y NV+
Sbjct: 445 DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPT---ASAWGALLAACRVYKNVE 501
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+ + A L +IE + + L NI +A W + + VR MKE G+ K PGCS +++
Sbjct: 502 LAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVG 561
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+H F+VGD S+ E +IY+ LD + + +
Sbjct: 562 NKVHTFVVGDKSNIESDKIYNFLDELVEKM 591
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 136/315 (43%), Gaps = 20/315 (6%)
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
+N G +AR LFD P D + +I+ +EA+ ++ +Q +KPD + +
Sbjct: 23 LNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFL 82
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
A CA G + K +H + D V ALI Y KC +E A +F +L +
Sbjct: 83 AAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVR 142
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D SWTS+ G K +++F +M G KP+ +T +L AC+ + G+
Sbjct: 143 DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIH 202
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+ + L L+ L + + EA + +P+ + +V G L +
Sbjct: 203 GFAVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRD---VVSWNGVLTA---Y 255
Query: 506 YGNVDMGEKLAALL----EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK- 560
+ N + + + L + + + +++++ ++ + R E+ + +KM++MG +
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENG-RSEEAVEMFRKMQKMGFKPN 314
Query: 561 -------VPGCSSIE 568
+P CS E
Sbjct: 315 EITISSILPACSFSE 329
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI + G +A ++F + + D + +++I L +G N+A++++S + G KPD
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 422 DITFIGVLSACSHGG 436
F+ AC+ G
Sbjct: 78 MPVFLAAAKACAVSG 92
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/495 (37%), Positives = 291/495 (58%), Gaps = 14/495 (2%)
Query: 110 VHGYVVKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+H + K GL ++ +++ YG LG+ + + LFDEMP++ +V+ H
Sbjct: 32 IHCLLFKAGLLHAGAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSG 91
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC----TALKNLELGKEIHRYINQ-ELEFT 223
+ A+D+F+ M MPD + L+AC + G+ +H +I +E
Sbjct: 92 QAAQALDLFQDMIAD-GFMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPD 150
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ L+ +Y + G ++ AR +FD MP K+ I W +MV YV +E A LF P
Sbjct: 151 VFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPR 210
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREM---QIIRLKPDKFILVALLTGCAQLGALEQG 340
RD+V W +I GY R EA+ LFR+M + P+ + +L+ CA G LE G
Sbjct: 211 RDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETG 270
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAM 399
W+H YI++N++ + + LI+MYAKCG I+KAL++F + ++D SWT++ICGLAM
Sbjct: 271 IWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAM 330
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G+ N L +FS M G PDD+TF+GVL+AC+HGGLVDEG F +M E Y+I PK+E
Sbjct: 331 HGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPKIE 390
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGC+IDLLGR G L EA +I+ +P + N +I +GA LSAC+++ +V++GE AA +
Sbjct: 391 HYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVI---WGAFLSACKVHSSVELGEIAAAEV 447
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+++ D +++++YA A W + R++M + ++K PGCSS+ ++G +HEF+ G
Sbjct: 448 TRLDPDDPWARVMMSSMYAKAQDWSGLARERREMNSLQMKKTPGCSSVALDGEVHEFVAG 507
Query: 580 DPSHSEMKEIYSMLD 594
H EI S+L+
Sbjct: 508 GNQHPLCAEICSVLE 522
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 176/420 (41%), Gaps = 74/420 (17%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I +F+ GL L + + + G +A +F + + L+A + +A A
Sbjct: 32 IHCLLFKAGLLHAGAHLPTAL-LSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVS 90
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEV----KKGEKVHGYVVKTGLEFD 122
G ++L LF + G PDN V A G G VH ++V G+E D
Sbjct: 91 GQAAQALDLFQDMIADGFMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPD 150
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDK------------------------------ 152
+V ++ +YG G++ +++FD MP K
Sbjct: 151 VFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPR 210
Query: 153 -DVVSWNVSISGHVKCMRFEDAVDVFRRM--RQGCNLMPDEGTVVSTLSACTALKNLELG 209
DVVSWN I+G+ R ++A+ +FR+M C + P+ T+ + LSAC LE G
Sbjct: 211 RDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETG 270
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+H YI++ ++ + L+DMY KCG + +A ++F++ P K
Sbjct: 271 IWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGK--------------- 315
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
RD+ WT +I G R ++ + +F MQ + PD V +L
Sbjct: 316 ---------------RDLYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVL 360
Query: 329 TGCAQLGALEQGKWIHGYIN---ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
CA G +++G +H + + + RIT +I++ + G + +A + + K
Sbjct: 361 NACAHGGLVDEG--LHHFYSMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMK 418
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 8/231 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG---VSPDNFTYPFVFKA 97
A ++F ++ ++++N +I + G +++L LF ++ V P+ T V A
Sbjct: 201 AYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSA 260
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVS 156
G ++ G VH Y+ K + + + ++DMY G I ++F++ P K D+ S
Sbjct: 261 CAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYS 320
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
W I G R D + +F M Q + PD+ T V L+AC ++ G +
Sbjct: 321 WTTVICGLAMHGRANDVLRMF-SMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSM 379
Query: 217 NQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG 264
++ TP + + ++D+ + G L EA + MP K N++ W + +S
Sbjct: 380 QEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIWGAFLSA 430
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/563 (33%), Positives = 323/563 (57%), Gaps = 39/563 (6%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
K+F ++ ++++N +I F + + LF ++ GV+PD T+ V KA+G L
Sbjct: 227 KVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLR 286
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE--MPDKDVVSWNVS 160
+V K ++V GY ++ G++ +T V +++DM G + + +F+ + + WN
Sbjct: 287 DVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAM 346
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
ISG+++ E A+++F +M Q ++ D T S +A ALK L LGK++H R I
Sbjct: 347 ISGYLRSGFNEKALELFAKMCQN-DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSG 405
Query: 220 LEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
LE + + NA+ + Y KC G LE R +F
Sbjct: 406 LEVNYVSISNAVANAYAKC-------------------------------GSLEDVRKVF 434
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+R RD++ WT+++ Y Q + +D+A+ +F M+ + P++F ++L CA L LE
Sbjct: 435 NRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLE 494
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ +HG I + + +D + +AL++MYAKCG + A ++F + D SWT+II G A
Sbjct: 495 YGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHA 554
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+G ++ AL+LF +M+ G +P+ +TF+ VL ACSHGGLV+EG ++F M + Y + P++
Sbjct: 555 QHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEM 614
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
EHY C++DLL R G L++A E I ++P E NE++ + LL ACR++GNV++GE A
Sbjct: 615 EHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMV---WQTLLGACRVHGNVELGELAAQK 671
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ ++++S+ + LL+N Y + ++D ++R MKE GV+K PGCS I +NG +H+F
Sbjct: 672 ILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYA 731
Query: 579 GDPSHSEMKEIYSMLDRMAKTLL 601
GD H E +IY+ L+ + L+
Sbjct: 732 GDQQHPEKDKIYAKLEELKLKLI 754
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 229/476 (48%), Gaps = 50/476 (10%)
Query: 27 MVFCTHPSHG-----NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRE 81
+V H +H ++ A ++F + ++ +LI A+ G F F +++
Sbjct: 105 LVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQS 164
Query: 82 RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICN 141
+G+ PD F Y + + L ++ G VH +V G T+V ++++MY L +I +
Sbjct: 165 QGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIED 224
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
K+F+ M + +VVSWN I+G + DA D+F RM G + PD T + A
Sbjct: 225 SYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRM-MGEGVTPDAQTFIGVAKAIG 283
Query: 202 ALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC--- 257
L+++ KE+ Y + ++ ++G AL+DM KCG L EAR +F+ + + C
Sbjct: 284 MLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFN---SHFITCRFN 340
Query: 258 --WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
W +M+SGY+ G EKA +LF + DI L
Sbjct: 341 APWNAMISGYLRSGFNEKALELFAKMCQNDIYL--------------------------- 373
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV-VATALIEMYAKCGLIEK 374
D + ++ A L L GK +H ++ + V+ V ++ A+ YAKCG +E
Sbjct: 374 ----DHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
++F + ++D SWTS++ + + +KA+E+FS M + G P+ TF VL +C++
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN 489
Query: 435 GGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
L++ G++ + +V + +E L+D+ + G L +A+++ +I N +
Sbjct: 490 LCLLEYGQQVHGIICKVGLDMDKCIE--SALVDMYAKCGCLGDAKKVFNRISNADT 543
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 165/317 (52%), Gaps = 12/317 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ A+ + GL+ N +++ V + G+L K+F ++ L+++ L+ A++
Sbjct: 395 KKVHARAIKSGLEVNYVSISN-AVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYS 453
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ + K++ +FS +R G++P+ FT+ V + L ++ G++VHG + K GL+ D
Sbjct: 454 QCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKC 513
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++++DMY G + + KK+F+ + + D VSW I+GH + +DA+ +FRRM Q
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQ-L 572
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
+ P+ T + L AC+ +E G + + + + P M + ++D+ + G L++
Sbjct: 573 GVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLND 632
Query: 243 ARELFDEMP-NKNVICWTSM-----VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
A E MP N + W ++ V G V G+L + L ++ + + + N Y
Sbjct: 633 AMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKA--ENSATYVLLSNTY 690
Query: 297 VQFNRFDEAVALFREMQ 313
++ + + ++L M+
Sbjct: 691 IESGSYKDGLSLRHLMK 707
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 140/341 (41%), Gaps = 40/341 (11%)
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+ +++ + Y C ++ A LFD+ R+ WT +I G + F + F E
Sbjct: 102 HHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCE 161
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
MQ + PD+F +L C L ++E G +H I T V+TAL+ MYAK
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IE + ++F + E + SW ++I G N A +LF +M+ G PD TFIGV A
Sbjct: 222 IEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
Query: 432 C-----------------------------------SHGGLVDEGRRFFNTMTEVYQIQP 456
S G + E R FN+ +
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
+ +I R+G ++A EL K+ + + Y ++ +A + +G+K+
Sbjct: 342 P---WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVH 398
Query: 517 ALLEK--IESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
A K +E S +AN YA EDV V +M++
Sbjct: 399 ARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED 439
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/563 (33%), Positives = 323/563 (57%), Gaps = 39/563 (6%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
K+F ++ ++++N +I F + + LF ++ GV+PD T+ V KA+G L
Sbjct: 227 KVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLR 286
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE--MPDKDVVSWNVS 160
+V K ++V GY ++ G++ +T V +++DM G + + +F+ + + WN
Sbjct: 287 DVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAM 346
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
ISG+++ E A+++F +M Q ++ D T S +A ALK L LGK++H R I
Sbjct: 347 ISGYLRSGFNEKALELFAKMCQN-DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSG 405
Query: 220 LEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
LE + + NA+ + Y KC G LE R +F
Sbjct: 406 LEVNYVSISNAVANAYAKC-------------------------------GSLEDVRKVF 434
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+R RD++ WT+++ Y Q + +D+A+ +F M+ + P++F ++L CA L LE
Sbjct: 435 NRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLE 494
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ +HG I + + +D + +AL++MYAKCG + A ++F + D SWT+II G A
Sbjct: 495 YGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHA 554
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+G ++ AL+LF +M+ G +P+ +TF+ VL ACSHGGLV+EG ++F M + Y + P++
Sbjct: 555 QHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEM 614
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
EHY C++DLL R G L++A E I ++P E NE++ + LL ACR++GNV++GE A
Sbjct: 615 EHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMV---WQTLLGACRVHGNVELGELAAQK 671
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ ++++S+ + LL+N Y + ++D ++R MKE GV+K PGCS I +NG +H+F
Sbjct: 672 ILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYA 731
Query: 579 GDPSHSEMKEIYSMLDRMAKTLL 601
GD H E +IY+ L+ + L+
Sbjct: 732 GDQQHPEKDKIYAKLEELKLKLI 754
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 229/476 (48%), Gaps = 50/476 (10%)
Query: 27 MVFCTHPSHG-----NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRE 81
+V H +H ++ A ++F + ++ +LI A+ G F F +++
Sbjct: 105 LVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQS 164
Query: 82 RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICN 141
+G+ PD F Y + + L ++ G VH +V G T+V ++++MY L +I +
Sbjct: 165 QGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIED 224
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
K+F+ M + +VVSWN I+G + DA D+F RM G + PD T + A
Sbjct: 225 SYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRM-MGEGVTPDAQTFIGVAKAIG 283
Query: 202 ALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC--- 257
L+++ KE+ Y + ++ ++G AL+DM KCG L EAR +F+ + + C
Sbjct: 284 MLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFN---SHFITCRFN 340
Query: 258 --WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
W +M+SGY+ G EKA +LF + DI L
Sbjct: 341 APWNAMISGYLRSGFNEKALELFAKMCQNDIYL--------------------------- 373
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV-VATALIEMYAKCGLIEK 374
D + ++ A L L GK +H ++ + V+ V ++ A+ YAKCG +E
Sbjct: 374 ----DHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
++F + ++D SWTS++ + + +KA+E+FS M + G P+ TF VL +C++
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN 489
Query: 435 GGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
L++ G++ + +V + +E L+D+ + G L +A+++ +I N +
Sbjct: 490 LCLLEYGQQVHGIICKVGLDMDKCIE--SALVDMYAKCGCLGDAKKVFNRISNADT 543
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 165/317 (52%), Gaps = 12/317 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ A+ + GL+ N +++ V + G+L K+F ++ L+++ L+ A++
Sbjct: 395 KKVHARAIKSGLEVNYVSISN-AVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYS 453
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ + K++ +FS +R G++P+ FT+ V + L ++ G++VHG + K GL+ D
Sbjct: 454 QCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKC 513
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++++DMY G + + KK+F+ + + D VSW I+GH + +DA+ +FRRM Q
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQ-L 572
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
+ P+ T + L AC+ +E G + + + + P M + ++D+ + G L++
Sbjct: 573 GVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLND 632
Query: 243 ARELFDEMP-NKNVICWTSM-----VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
A E MP N + W ++ V G V G+L + L ++ + + + N Y
Sbjct: 633 AMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKA--ENSATYVLLSNTY 690
Query: 297 VQFNRFDEAVALFREMQ 313
++ + + ++L M+
Sbjct: 691 IESGSYKDGLSLRHVMK 707
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 140/341 (41%), Gaps = 40/341 (11%)
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+ +++ + Y C ++ A LFD+ R+ WT +I G + F + F E
Sbjct: 102 HHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCE 161
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
MQ + PD+F +L C L ++E G +H I T V+TAL+ MYAK
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IE + ++F + E + SW ++I G N A +LF +M+ G PD TFIGV A
Sbjct: 222 IEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
Query: 432 C-----------------------------------SHGGLVDEGRRFFNTMTEVYQIQP 456
S G + E R FN+ +
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
+ +I R+G ++A EL K+ + + Y ++ +A + +G+K+
Sbjct: 342 P---WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVH 398
Query: 517 ALLEK--IESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
A K +E S +AN YA EDV V +M++
Sbjct: 399 ARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED 439
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/565 (34%), Positives = 311/565 (55%), Gaps = 44/565 (7%)
Query: 69 FRKSLLLFSKLRERGVSPDN--FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
F K L S +R+ VSP N + K + ++K + VH V + +
Sbjct: 11 FPKLQALVSSIRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLG 70
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
+M Y G+ + +FD +P+++V+ +NV I ++ ++DA+ VFR M G
Sbjct: 71 IKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSG-GF 129
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARE 245
PD T L AC+ NL +G ++H + + L+ +GN L+ +Y KCGCL EAR
Sbjct: 130 SPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARC 189
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARD----------------------------- 276
+ DEM +K+V+ W SMV+GY Q + A D
Sbjct: 190 VLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS 249
Query: 277 --------LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
+F + +V W MI+ Y++ + ++V L+ +M ++PD ++L
Sbjct: 250 ENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVL 309
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
C L AL G+ IH Y+ ++ + ++ +LI+MYA+CG +E A +F ++ +D A
Sbjct: 310 RACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVA 369
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
SWTS+I M G+ A+ LF++M + G PD I F+ +LSACSH GL++EG+ +F M
Sbjct: 370 SWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQM 429
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
T+ Y+I P +EH+ CL+DLLGR+G +DEA +I+++P + NE + +GALLS+CR+Y N
Sbjct: 430 TDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERV---WGALLSSCRVYSN 486
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+D+G A L ++ ++S ++ LL+NIYA A RW +VT +R MK +RK+PG S++E
Sbjct: 487 MDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVE 546
Query: 569 INGIIHEFLVGDPSHSEMKEIYSML 593
+N +H FL GD H + KEIY L
Sbjct: 547 LNNQVHTFLAGDTYHPQSKEIYEEL 571
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 243/536 (45%), Gaps = 92/536 (17%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LK + +++F + +NP KLM + + G A +F I ++ YN++I+++
Sbjct: 51 LKNVHSKVFNLSFHENPSLGIKLMR--AYAARGEPGLARNVFDVIPERNVIFYNVMIRSY 108
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ +LL+F + G SPD++TYP V KA ++ G ++HG V K GL+ +
Sbjct: 109 MNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNL 168
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N ++ +YG G + + + DEM KDVVSWN ++G+ + M+F+DA+D+ R M G
Sbjct: 169 FVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM-DG 227
Query: 184 CNLMPDEGTVVSTLSACTA-------------------------------LKNLELGKEI 212
PD T+ S L A T +KN GK +
Sbjct: 228 VRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSV 287
Query: 213 HRYINQ---ELEFTPIMGNALLDMYCKCGCLSE---ARELFDEMPNK----NVICWTSMV 262
Y+ E+E I ++L CG LS R + + + K N++ S++
Sbjct: 288 DLYLQMGKCEVEPDAITCASVLR---ACGDLSALLLGRRIHEYVERKKLCPNMLLENSLI 344
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
Y CG LE A+ +FDR RD+ WT++I+ Y + AVALF EMQ PD
Sbjct: 345 DMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSI 404
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
VA+L+ C+ G L +GK+ Y + D T +IE +A
Sbjct: 405 AFVAILSACSHSGLLNEGKF---YFKQ---MTDDYKITPIIEHFA--------------- 443
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
++ L +G++++A + QM KP++ + +LS+C +D G
Sbjct: 444 ---------CLVDLLGRSGRVDEAYNIIKQM---PMKPNERVWGALLSSCRVYSNMDIG- 490
Query: 443 RFFNTMTEVYQIQPKLEHYGCLI-DLLGRAGLLDEAEEL--------IRKIPNENN 489
++ Q+ P+ Y L+ ++ +AG E + IRK+P +N
Sbjct: 491 --ILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISN 544
>gi|225430506|ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 517
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/549 (36%), Positives = 306/549 (55%), Gaps = 47/549 (8%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
H + LY+ S+ S L +N +IK +G+ +++L + +++ G DNFT+P +
Sbjct: 5 HCSFLYS---LSSVDSG-LQRWNKVIKRRVSQGNPDQAILAYVEMKRVGFDADNFTFPVL 60
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
KA L G +HG +KTG +V +++DMY G I + K+F+EM KDV
Sbjct: 61 LKAASSLSSCCIGFALHGQAMKTGFSGHCFVGTALLDMYSAFGAIDHATKVFEEMGVKDV 120
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
V WN ++ + C + ++A+ +F M LK+L
Sbjct: 121 VVWNSMLAAYASCGQMDNAMKLFDNM---------------------PLKDLA------- 152
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
F N ++ Y K G + AR +FD + K+++ W SM+ N G + A
Sbjct: 153 ------SF-----NIMISGYAKIGKKAAARSIFDRIHAKDIVSWNSMILACTNVGDMGNA 201
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
R+LFD P ++++ W MI+GY+ + EAV LF EM+ + D + +L+ CA L
Sbjct: 202 RNLFDVMPKKNVITWNTMISGYLHAQLYAEAVDLFDEMKAGNHEADHLTVTLVLSACAHL 261
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
G L +G +H Y ++R+ VAT+LI+MYAKCG I+++LE+FY+ + KD W +II
Sbjct: 262 GWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDIYCWNAII 321
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
GLA++G + A++L +M G +PD+ITFIG+LSACSH LV EG R F+ M + + +
Sbjct: 322 SGLALHGYGHAAVKLLDKMRDNGVRPDEITFIGLLSACSHRSLVQEGCRLFDCMEKEFGL 381
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
PKLEHYGC++DLLGRAG LD A +LI+ +P E E I+ GALL AC I+ +++ GEK
Sbjct: 382 PPKLEHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESIL---GALLGACVIHQDLETGEK 438
Query: 515 LAALL-EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
+ L+ K + N+YAS +W++ R++M E G+ K G S+IE++G
Sbjct: 439 VINLITSKAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIEVDGKF 498
Query: 574 HEFLVGDPS 582
+ FL GD S
Sbjct: 499 YRFLAGDIS 507
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 43/311 (13%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ + G + +A K+F + ++ +N ++ A+A G ++ LF + + ++ N
Sbjct: 99 YSAFGAIDHATKVFEEMGVKDVVVWNSMLAAYASCGQMDNAMKLFDNMPLKDLASFNIMI 158
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEF-DTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
G K G+K + + D NS++ +G + N + LFD MP
Sbjct: 159 S---------GYAKIGKKAAARSIFDRIHAKDIVSWNSMILACTNVGDMGNARNLFDVMP 209
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
K+V++WN ISG++ + +AVD+F M+ G N D TV LSAC L L G
Sbjct: 210 KKNVITWNTMISGYLHAQLYAEAVDLFDEMKAG-NHEADHLTVTLVLSACAHLGWLGKGT 268
Query: 211 EIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
E+H Y + L +P + +L+DMY KCG + + E+F + K++ CW +++SG
Sbjct: 269 EMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDIYCWNAIISGLA--- 325
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
++GY AV L +M+ ++PD+ + LL+
Sbjct: 326 -----------------------LHGYGH-----AAVKLLDKMRDNGVRPDEITFIGLLS 357
Query: 330 GCAQLGALEQG 340
C+ +++G
Sbjct: 358 ACSHRSLVQEG 368
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/498 (37%), Positives = 301/498 (60%), Gaps = 6/498 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDM-YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
++ H +++K+G +++ + I+ LG + +F +M + ++ SWN I G +
Sbjct: 41 QQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQ 100
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
+ A+ +F M + P T S A + L G ++H R I L+F P
Sbjct: 101 SSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPF 160
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ N +L MY G LSEAR +F++ +V+ W SM+ G CG+++++R LFD+ PV++
Sbjct: 161 IRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKN 220
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+ W +MI GYV+ F EA+ LF +MQ R++P +F +V+LL AQ+GAL QG WIH
Sbjct: 221 PISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHE 280
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
YI +N + ++A+V TA+I+MY KCG I AL++F ++ + +SW S+I GLA+NG +
Sbjct: 281 YIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKE 340
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A+ +F + S KPD I+F+ VL+AC+HG +VDEG FF+ M Y+I+P ++HY ++
Sbjct: 341 AILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMV 400
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
D++ RAG L+EAE+ I+ +P E + II +G LLSACRIYGN +M ++ A + +++ +
Sbjct: 401 DMISRAGFLEEAEQFIKTMPIEKDAII---WGCLLSACRIYGNTEMAKRAAEKVNELDPE 457
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS-HS 584
++ + L+ANI+A N + R M+ V K PG S IE++ +HEF+ G H
Sbjct: 458 ETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFIEVDEEVHEFIAGGGRLHR 517
Query: 585 EMKEIYSMLDRMAKTLLD 602
+ +EIY +L ++ L D
Sbjct: 518 KAQEIYIVLGQLGVMLQD 535
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 211/441 (47%), Gaps = 68/441 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M L+Q A + + G ++++ FC P GN+ YA +F +Q+P L ++N +I
Sbjct: 37 MRDLQQFHAHLIKSGQAIESFAASRILAFCASPL-GNMDYAYLVFLQMQNPNLFSWNTVI 95
Query: 61 KAFAKKGSFRKSLLLF-SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ F++ + + +L LF L V P TYP +FKA LG G ++HG ++K GL
Sbjct: 96 RGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGL 155
Query: 120 EFDTYVCNSIMDMYGV-------------------------------LGKICNVKKLFDE 148
+FD ++ N+I+ MY G+I +KLFD+
Sbjct: 156 QFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDK 215
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP K+ +SWN I G+V+ F++A+ +F +M++ + P E T+VS L+A + L
Sbjct: 216 MPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEE-RIQPSEFTMVSLLNASAQIGALRQ 274
Query: 209 GKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G IH YI + L+ I+ A++DMYCKCG + A ++F+++P +++ W SM+ G
Sbjct: 275 GVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLA- 333
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+NG + EA+ +F+ ++ LKPD +A+
Sbjct: 334 -------------------------VNGCEK-----EAILVFKMLESSSLKPDCISFMAV 363
Query: 328 LTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EK 385
LT C +++G ++ N RI +++M ++ G +E+A + + EK
Sbjct: 364 LTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEK 423
Query: 386 DAASWTSIICGLAMNGKINKA 406
DA W ++ + G A
Sbjct: 424 DAIIWGCLLSACRIYGNTEMA 444
>gi|22293716|dbj|BAC10060.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 631
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 297/530 (56%), Gaps = 17/530 (3%)
Query: 82 RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY-----GVL 136
+GV P+ FT+ F+ +A LG + VHG +V+ G D +V N++MD+Y G
Sbjct: 105 QGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGG 164
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVST 196
G + +++FDEM D+DVVSWN + ++ A+ F M E VVS
Sbjct: 165 GGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAM--------PERNVVSW 216
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
+ + ++ + N ++ Y G + AR +FD M K+V+
Sbjct: 217 NTVVAGFARMGDMVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVV 276
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII- 315
WT+MVS Y G L+ +LFD PV+++V W AMI GY +R+DEA+ F+ M +
Sbjct: 277 SWTAMVSAYAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEG 336
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
R +PD+ LV++++ CAQLG++E WI +I ++ I + + ALI+M+AKCG + +A
Sbjct: 337 RFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRA 396
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
IFY++ + +WT++I G A NG AL +++ M G + DD FI L+AC+HG
Sbjct: 397 ESIFYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHG 456
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
GL+ EG FN M E Y IQP++EHYGC++DLLGRAG L EA I +P E + +I
Sbjct: 457 GLLQEGWSIFNEMVERYNIQPRMEHYGCMVDLLGRAGNLQEAILFIESMPLEPSVVI--- 513
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
+ LL +C +GN ++ E ++ + ++E +SS+ L++N A RW+ V + R M+
Sbjct: 514 WVTLLCSCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRN 573
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQ 605
G+ KVPG SSI++ +HEFL D H KEIY +D + + ++Q
Sbjct: 574 WGIEKVPGSSSIQVGSEVHEFLAKDTRHKRRKEIYETVDGLMALMRHTEQ 623
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 208/630 (33%), Positives = 335/630 (53%), Gaps = 86/630 (13%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAE-KIFGSIQSPCLLAYNLLI 60
+Q +Q+ AQ+ + L ++ SH NLL+ ++F +I P LA+ +I
Sbjct: 23 SQAQQLHAQVLKFQASSLCNLSLLLSIY----SHINLLHDSLRLFNTIHFPPALAWKSVI 78
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + G +SL F + G+ PD+ +P V K+ L ++ GE +HGY+++ GL+
Sbjct: 79 RCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLD 138
Query: 121 FDTYVCNSIMDMYGVL-------------GKICN-------------------VKKLFDE 148
FD Y N++M+MY L G++ + V+K+F+
Sbjct: 139 FDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEM 198
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP+KD+VSWN I+G+ + +E+ + + R M G NL PD T+ S L ++
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREM-GGANLKPDSFTLSSVLPLIAENVDISR 257
Query: 209 GKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
GKEIH I Q L+ + ++L+DMY KC ++++ +F +
Sbjct: 258 GKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTE--------------- 302
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
RD + W ++I G VQ FDE + FR+M + ++KP + ++
Sbjct: 303 ----------------RDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
+ CA L L GK +HGYI N + +A++L++MYAKCG I A +IF +R +D
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SWT++I G A++G+ A+ELF QM + G K VL+ACSHGGLVDE ++FN+
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNS 459
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACR 504
MT + I P +EHY + DLLGRAG L+EA + I + I P ++ LLSACR
Sbjct: 460 MTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH------IGPTGSIWATLLSACR 513
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGC 564
++ N+DM EK+A + +++ ++ + LLANIY++A RW++ R M+ +G+RK P C
Sbjct: 514 VHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPAC 573
Query: 565 SSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
S IE+ ++ F+ GD SH ++I ++
Sbjct: 574 SWIEVKNKVYAFMAGDESHPCYEKIREAME 603
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/581 (34%), Positives = 322/581 (55%), Gaps = 39/581 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + L+++N+++ + K G+ + LF+++ E+ V ++ +
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV----VSWNAMLSGFAQ 165
Query: 101 LGEVKKGEKVHGY-VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
G V++ K+ +VK + + N ++ Y G+I + ++LFD D ++VSWN
Sbjct: 166 NGFVEEARKIFDQMLVKNEISW-----NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNC 220
Query: 160 SISGHVKCMRFEDAVDVFRRM------------------------RQGCNLMPDEGTVVS 195
+ G+V+ R +DA +F RM R+ +P
Sbjct: 221 LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAW 280
Query: 196 TLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
T ++N L E R + E + NA++ Y + + +ARELFD+MP++N
Sbjct: 281 TAMVSGFVQNGML-DEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNT 339
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
W +MV+GY CG +++A+ LFD P RD + W AMI+GY Q + +EA+ LF +M+
Sbjct: 340 SSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRD 399
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
++ L L+ CA++ ALE GK +HG + + + AL+ MY KCG IE+A
Sbjct: 400 GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEA 459
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
++F ++ EKD SW ++I G A +G +AL LF M KPDD+T +GVLSACSH
Sbjct: 460 FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHT 518
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
GLVD+G +FN+M + Y I +HY C+IDLLGRAG LDEA L++ +P +
Sbjct: 519 GLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD---AAT 575
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
+GALL A RI+G+ ++GEK A + ++E +S + LL+N+YA++ RW +V +R KM++
Sbjct: 576 WGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRD 635
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
GV+KVPG S +EI H F VGD SH E + IY+ L+ +
Sbjct: 636 KGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEEL 676
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 193/413 (46%), Gaps = 41/413 (9%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVC-NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++KG+ V G+ + V N+++ Y K +K+F++MPD+D++SWNV +S
Sbjct: 71 MRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLS 130
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
G+VK A +F N MP E VVS + + +E + +Q L
Sbjct: 131 GYVKNGNLSAARALF-------NQMP-EKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK 182
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
I N LL Y + G + +AR LFD + ++ W ++ GYV +L+ AR LFDR P
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-- 340
VRD + W MI GY Q EA LF E+ I D F A+++G Q G L++
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRLFEELPI----RDVFAWTAMVSGFVQNGMLDEATR 298
Query: 341 -----------KW---IHGYINENRI-----------TVDAVVATALIEMYAKCGLIEKA 375
W I GY+ +I + + ++ YA+CG I++A
Sbjct: 299 IFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQA 358
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F E+ ++D SW ++I G A +G+ +AL LF +M G + LS+C+
Sbjct: 359 KILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEI 418
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
++ G++ + + Q L+ + G+ G ++EA ++ I ++
Sbjct: 419 AALELGKQLHGRLVKA-GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKD 470
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 185/403 (45%), Gaps = 58/403 (14%)
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
D D+V WN IS +++ + E A+ VF MR+ + T + +S + + +
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTV-----TYNAMISGYLSNNKFDCAR 111
Query: 211 EI-HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG----- 264
++ + +++L I N +L Y K G LS AR LF++MP K+V+ W +M+SG
Sbjct: 112 KVFEKMPDRDL----ISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG 167
Query: 265 --------------------------YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
YV G++E AR LFD +IV W ++ GYV+
Sbjct: 168 FVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
R D+A +LF M + DK ++TG AQ G L + + + E D
Sbjct: 228 KKRLDDARSLFDRMPV----RDKISWNIMITGYAQNGLLSEAR----RLFEELPIRDVFA 279
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TA++ + + G++++A IF E+ EK+ SW ++I G + +I KA ELF QM S
Sbjct: 280 WTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNT 339
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
++ +++ + G +D+ + F+ M Q + +I ++G +EA
Sbjct: 340 S----SWNTMVTGYAQCGNIDQAKILFDEMP-----QRDCISWAAMISGYAQSGQSEEAL 390
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
L K+ + + LS+C +++G++L L K
Sbjct: 391 HLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/592 (33%), Positives = 322/592 (54%), Gaps = 38/592 (6%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ + G +P N L+ + G L A K+F ++ ++ +N +I F +
Sbjct: 94 QLHGLVISCGFHFDPLVANALVAM--YSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQ 151
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G ++ LLFS++ GVSPD+ T+ +V +K+G+++HGY+++ G+ D ++
Sbjct: 152 NGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFL 211
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
++++D+Y + K+F + + D+V ISG+V DA+++FR + +
Sbjct: 212 KSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEE-K 270
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEAR 244
+ P+ T+ S L AC L L LGKE+H I L+ +G+A++DMY KCG
Sbjct: 271 MSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCG------ 324
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+L+ A +F R P +D V W A+I Q + E
Sbjct: 325 -------------------------RLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQE 359
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A+ LFR+M L D + A L+ CA L AL GK IH ++ + + +ALI+
Sbjct: 360 AIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALID 419
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY KCG + A +F +REK+ SW SII +G + +L LF +M+ G +PD +T
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ +LSAC H G VD+G ++F MTE Y I ++EHY C++DL GRAG L+EA E I+ +
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNM 539
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P ++ + +G LL ACR++GNV++ E + L ++ ++S + LL+N++A A +W
Sbjct: 540 PFSPDDGV---WGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWG 596
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
V +R MK+ GV+KVPG S IE+N H F+ D SH E +IYS+L+ +
Sbjct: 597 SVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNL 648
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + + + +N+++ F K G ++ +F +R P++ T+ V
Sbjct: 26 ARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICAS 85
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ G ++HG V+ G FD V N+++ MY G++ + KLF+ MPD +VV+WN
Sbjct: 86 EALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGM 145
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQE 219
I+G V+ ++A +F M + PD T S L + T +L+ GKEIH YI
Sbjct: 146 IAGFVQNGFMDEASLLFSEMISA-GVSPDSITFASFLPSVTESASLKQGKEIHGYILRHG 204
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ + +AL+D+Y KC + A ++F + N
Sbjct: 205 IALDVFLKSALIDIYFKCRDVGMACKIFKQSTNV-------------------------- 238
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
DIV+ TA+I+GYV ++A+ +FR + ++ P+ L ++L CA L L
Sbjct: 239 -----DIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNL 293
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK +H I ++ + V +A+++MYAKCG ++ A +IF + EKDA W +II +
Sbjct: 294 GKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQ 353
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
NGK +A++LF QM G D ++ LSAC++ + G+ + M + ++
Sbjct: 354 NGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK-GAFDSEVF 412
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL--AA 517
LID+ G+ G L A + + E NE+ + ++++A +G++++ L
Sbjct: 413 AESALIDMYGKCGNLSVA-RCVFDMMREKNEVS---WNSIIAAYGSHGHLEVSLALFHKM 468
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
L + I+ +F T+L+ + + + R +E G+
Sbjct: 469 LEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGI 509
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 181/372 (48%), Gaps = 34/372 (9%)
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G D +V +S++ +Y G I + ++LFD+MP+KD V WNV ++G VKC AV VF
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
MR C P+ T S LS C + E G ++H I+ F P++ NAL+ MY K
Sbjct: 62 EDMRN-CQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G QL A LF+ P ++V W MI G+
Sbjct: 121 FG-------------------------------QLSDALKLFNTMPDTNVVTWNGMIAGF 149
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ DEA LF EM + PD + L + +L+QGK IHGYI + I +D
Sbjct: 150 VQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDV 209
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ +ALI++Y KC + A +IF + D T+II G +NG N ALE+F ++
Sbjct: 210 FLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEE 269
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
P+ +T VL AC+ ++ G+ + + + + + ++D+ + G LD
Sbjct: 270 KMSPNAVTLASVLPACAGLATLNLGKELHANILK-HGLDERRHVGSAIMDMYAKCGRLDL 328
Query: 477 AEELIRKIPNEN 488
A ++ R++P ++
Sbjct: 329 AYQIFRRMPEKD 340
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/497 (37%), Positives = 303/497 (60%), Gaps = 6/497 (1%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+ +H ++VK G+ + N+++++YG G + ++FDEMP +D ++W ++ +
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
+ VF + L PD+ + + AC L +++ G+++H +I E +
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV 141
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ ++L+DMY KCG L+ A+ +FD + KN I WT+MVSGY G+ E+A +LF PV++
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKN 201
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP-DKFILVALLTGCAQLGALEQGKWIH 344
+ WTA+I+G+VQ + EA ++F EM+ R+ D +L +++ CA L A G+ +H
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH 261
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
G + ++ ALI+MYAKC + A +IF +R +D SWTS+I G+A +G+
Sbjct: 262 GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAE 321
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
KAL L+ M+S G KP+++TF+G++ ACSH G V++GR F +MT+ Y I+P L+HY CL
Sbjct: 322 KALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCL 381
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA-ALLEKIE 523
+DLLGR+GLLDEAE LI +P +E P + ALLSAC+ G MG ++A L+ +
Sbjct: 382 LDLLGRSGLLDEAENLIHTMPFPPDE---PTWAALLSACKRQGRGQMGIRIADHLVSSFK 438
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
KD S + LL+NIYASA+ W V+ R+K+ EM VRK PG SS+E+ F G+ SH
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSH 498
Query: 584 SEMKEIYSMLDRMAKTL 600
++I+ +L ++ + +
Sbjct: 499 PLKEDIFRLLKKLEEEM 515
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 214/489 (43%), Gaps = 77/489 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VF--CTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+T K + A I ++G+ Q N L+ V+ C SH A ++F + +A+
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASH-----ALQVFDEMPHRDHIAWA 73
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
++ A + K+L +FS + + PD+F + + KA LG + G +VH + +
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
+ D V +S++DMY G + + K +FD + K+ +SW +SG+ K R E+A+++
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 177 FR-------------------------------RMRQGCNLMPDEGTVVSTLSACTALKN 205
FR MR+ + D + S + AC L
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 206 LELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
G+++H I + + NAL+DMY KC + A+++F M +++V+ WTS++ G
Sbjct: 254 SIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
GQ EK A+AL+ +M +KP++
Sbjct: 314 MAQHGQAEK-------------------------------ALALYDDMVSHGVKPNEVTF 342
Query: 325 VALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
V L+ C+ +G +E+G+ + + ++ I T L+++ + GL+++A + + +
Sbjct: 343 VGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
Query: 384 -EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI---GVLSACSHGGLVD 439
D +W +++ G+ + + ++S D T+I + ++ S G V
Sbjct: 403 FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVS 462
Query: 440 EGRRFFNTM 448
E RR M
Sbjct: 463 EARRKLGEM 471
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA+ L K +H +I + I +A L+ +Y KCG AL++F E+ +D +W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 391 TSIICGLAMNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFF-NTM 448
S++ L K L +FS + S +PDD F ++ AC++ G +D GR+ + +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
Y ++ L+D+ + GLL+ A+ + I +N
Sbjct: 133 VSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 208/626 (33%), Positives = 338/626 (53%), Gaps = 77/626 (12%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A+K+F ++ L+ +N ++ +A+ G K + LFS++R G PD FTY + A
Sbjct: 403 AKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACAC 462
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L ++ G ++H +++K E++ +V N+++DMY G + ++ F+ + ++D VSWN
Sbjct: 463 LECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAI 522
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
I G+V+ ++A ++FRRM + PDE ++ S LS C L+ LE G+++H + +
Sbjct: 523 IVGYVQEEDEDEAFNMFRRMILD-GIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSG 581
Query: 220 LEFTPIMGNALLDMYCKCGC------------------------------LSEARELFDE 249
L+ G++L+DMY KCG L EA +LF E
Sbjct: 582 LQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQE 641
Query: 250 MPNKNV----ICWTSMVSG------------------------------------YVNCG 269
M N+ + I + S++ Y+N
Sbjct: 642 MQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQ 701
Query: 270 QLEKARDLFDRSPV-RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
+ A LF + +LWTA+I+G+ Q +EA+ L++EM +PD+ ++L
Sbjct: 702 RKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVL 761
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-DA 387
C+ L +L G+ IH I + D + +A+++MYAKCG ++ ++++F E+ K D
Sbjct: 762 RACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDV 821
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SW S+I G A NG AL++F +M +PDD+TF+GVL+ACSH G V EGR F+
Sbjct: 822 ISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDI 881
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
M Y+I P+L+H C+IDLLGR G L EAEE I K+ E N +I + LL ACRI+G
Sbjct: 882 MVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMI---WATLLGACRIHG 938
Query: 508 NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+ G + A L ++E ++SS + LL+NIYA++ W++V +VR+ M+E G+RK+PGCS I
Sbjct: 939 DDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWI 998
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSML 593
+ + F+ GD H EI+++L
Sbjct: 999 VVGQKTNLFVAGDKFHPSAGEIHALL 1024
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 257/523 (49%), Gaps = 46/523 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K I AQ + G + ++ + GN+ +A K F ++ +LA+N ++ ++
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDL--YAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYS 158
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
++GS + + F L+ GVSP+ FTY V + L ++ G++VH V+K G EF+++
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
S++DMY G + + +K+FD + D D VSW I+G+V+ E+A+ VF M Q
Sbjct: 219 CEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDM-QKL 277
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
L+PD+ V+ ++AC L L+ ++ Q + N ++ + K GC EA
Sbjct: 278 GLVPDQVAFVTVITACVGLGRLDDACDL---FVQMPNTNVVAWNVMISGHVKRGCDIEAI 334
Query: 245 ELFDEM---------------------------------------PNKNVICWTSMVSGY 265
+ F M N NV +S+++ Y
Sbjct: 335 DFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMY 394
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
C ++E A+ +FD R++VLW AM+ GY Q + + LF EM+ PD+F
Sbjct: 395 AKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYT 454
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L+ CA L LE G+ +H +I ++ + V L++MYAKCG +E+A + F +R +
Sbjct: 455 SILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNR 514
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
D SW +II G ++A +F +MI G PD+++ +LS C++ +++G +
Sbjct: 515 DNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVH 574
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ + +Q L LID+ + G ++ A + +P+ +
Sbjct: 575 CFLVKS-GLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRS 616
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 266/574 (46%), Gaps = 70/574 (12%)
Query: 20 PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL 79
P+ + + V G L A +F + + ++A+N++I K+G +++ F +
Sbjct: 281 PDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNM 340
Query: 80 RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI 139
+ GV T V A+ L + G VH +K GL + YV +S+++MY K+
Sbjct: 341 WKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKM 400
Query: 140 CNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSA 199
KK+FD + ++++V WN + G+ + + +F MR GC PDE T S LSA
Sbjct: 401 EAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMR-GCGFWPDEFTYTSILSA 459
Query: 200 CTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
C L+ LE+G+++H +I E+ + N L+DMY KC
Sbjct: 460 CACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKC--------------------- 498
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
G LE+AR F+ RD V W A+I GYVQ DEA +FR M + +
Sbjct: 499 ----------GALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIA 548
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
PD+ L ++L+GCA L ALEQG+ +H ++ ++ + ++LI+MY KCG IE A +
Sbjct: 549 PDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYV 608
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
F + + S +II G A N + +A++LF +M + G P +ITF +L AC+ +
Sbjct: 609 FSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKL 667
Query: 439 DEGRR------------------------FFNTMTEV--------YQIQPKLEHYGCLID 466
+ GR+ + N+ + +Q + +I
Sbjct: 668 NLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIIS 727
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE-SK 525
+ G +EA +L +++ N + ++L AC I ++ G + +L+ +
Sbjct: 728 GHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDS 787
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
D + + ++YA D+ + Q +EMG +
Sbjct: 788 DELTGSAVVDMYAKCG---DMKSSVQVFEEMGSK 818
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 211/421 (50%), Gaps = 38/421 (9%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
+ + +H +K G + ++I+D+Y G + K F+++ +D+++WN +S +
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFT 223
+ E + F + Q C + P++ T LS+C L +++LGK++H I EF
Sbjct: 158 SRQGSLEQVIWCFGSL-QNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG-------------- 269
+L+DMY KCG L +AR++FD + + + + WT+M++GYV G
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276
Query: 270 ---------------------QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+L+ A DLF + P ++V W MI+G+V+ EA+
Sbjct: 277 LGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDF 336
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F+ M +K + L ++L+ A L AL G +H + + + V ++LI MYAK
Sbjct: 337 FKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAK 396
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
C +E A ++F L E++ W +++ G A NG +K ++LFS+M G PD+ T+ +
Sbjct: 397 CEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSI 456
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
LSAC+ ++ GR+ + + + + + L L+D+ + G L+EA + I N +
Sbjct: 457 LSACACLECLEMGRQLHSFIIK-HNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRD 515
Query: 489 N 489
N
Sbjct: 516 N 516
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 214/634 (33%), Positives = 337/634 (53%), Gaps = 84/634 (13%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F ++ L +N+L+ AK G F S+ LF K+ GV D++T+ V
Sbjct: 143 GDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
K+ L V GE++HGY++K+G V NS++ Y ++ + +K+FDEM ++DV+
Sbjct: 203 KSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVI 262
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I+G+V E + VF +M + D T+VS + C + + LG+ +H +
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLFS-GIEIDLATIVSVFAGCADSRLISLGRAVHCF 321
Query: 216 -----INQELEFTPIMGNALLDMYCKCGCLS----------------------------- 241
++E F N LLDMY KCG L
Sbjct: 322 GVKACFSREDRFC----NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGL 377
Query: 242 --EARELFDEM------PN--------------------KNVICW-------------TS 260
EA +LF+EM P+ K V W +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNA 437
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKP 319
++ Y CG + +A +F V+DI+ W +I GY + +EA++LF + + R P
Sbjct: 438 LMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSP 497
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D+ + +L CA L A ++G+ IHGYI N D VA +L++MYAKCG + A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLF 557
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
++ KD SWT +I G M+G +A+ LF+QM G +PD+I+F+ +L ACSH GLVD
Sbjct: 558 DDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVD 617
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG RFFN M +I+P +EHY C++D+L R G L +A I +P + I +GAL
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATI---WGAL 674
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
L CRI+ +V + E++A + ++E +++ ++ L+ANIYA A +WE+V +R+++ + G+R
Sbjct: 675 LCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLR 734
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
K PGCS IEI G ++ F+ GD S+ E ++I + L
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFL 768
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 243/555 (43%), Gaps = 90/555 (16%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N ++ F + G+ + ++ L + + P T V + +K G++V ++
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G D+ + + + MY G + ++FD++ + + WN+ ++ K F ++ +
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
F++M + D T + ++L+++ G+++H YI +GN+L+ Y
Sbjct: 183 FKKM-MSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYL 241
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF----------DRSPV-- 283
K + AR++FDEM ++VI W S+++GYV+ G EK +F D + +
Sbjct: 242 KNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVS 301
Query: 284 ---------------------------RDIVLWTAMINGYVQFNRFDEAVALFREM---- 312
R+ +++ Y + D A +FREM
Sbjct: 302 VFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS 361
Query: 313 ------------------QIIRL---------KPDKFILVALLTGCAQLGALEQGKWIHG 345
+ ++L PD + + A+L CA+ L++GK +H
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHE 421
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+I EN + D V+ AL++MYAKCG + +A +F E+R KD SW ++I G + N N+
Sbjct: 422 WIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANE 481
Query: 406 ALELFS-QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN-TMTEVYQIQPKLEHYGC 463
AL LF+ ++ PD+ T VL AC+ D+GR M Y + +
Sbjct: 482 ALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--S 539
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK-- 521
L+D+ + G L A L I +++ + + +++ YG G++ AL +
Sbjct: 540 LVDMYAKCGALLLARLLFDDITSKD----LVSWTVMIAG---YGMHGFGKEAIALFNQMR 592
Query: 522 ---IESKDSSFHTLL 533
IE + SF +LL
Sbjct: 593 QAGIEPDEISFVSLL 607
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 158/377 (41%), Gaps = 63/377 (16%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
D T+ S L C K+L+ GKE+ +I GN + L
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIR---------GNGFV--------------LDS 129
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+ +K + +T NCG L++A +FD+ + + W ++N + F ++ L
Sbjct: 130 NLGSKLALMYT-------NCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F++M ++ D + + + L ++ G+ +HGYI ++ V +L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
++ A ++F E+ E+D SW SII G NG K L +F QM+ G + D T + V
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSV 302
Query: 429 LSACSHGGLVDEGR---------------RFFNTMTEVYQIQPKLE-------------- 459
+ C+ L+ GR RF NT+ ++Y L+
Sbjct: 303 FAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSV 362
Query: 460 -HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
Y +I R GL EA +L ++ E V A+L+ C +D G+++
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVH-- 420
Query: 519 LEKIESKDSSFHTLLAN 535
E I+ D F ++N
Sbjct: 421 -EWIKENDMGFDIFVSN 436
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/508 (36%), Positives = 302/508 (59%), Gaps = 21/508 (4%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYG--VLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
E++H + +KT + +V + ++ +Y + + + +FD + + ++ WN I +V
Sbjct: 33 EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 92
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP- 224
+ D + +F + +PD T+ + C L ++ GK+IH + ++ F
Sbjct: 93 ENQFSHDGIVLFHELVH--EYLPDNFTLPCVIKGCARLGVVQEGKQIHG-LALKIGFGSD 149
Query: 225 -IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS-----------MVSGYVNCGQLE 272
+ +L++MY KCG + AR++FD M +K+V+ W S M++GY+ G +
Sbjct: 150 VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFD 209
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
A +LF + P+ D+V W MI GY +F +AV +F M + +P LV++L+ +
Sbjct: 210 SALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS 269
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
L L +G+WIH Y+ +N +D ++ T+LIEMYAKCG IE AL +F +++K WT+
Sbjct: 270 GLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTA 329
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
II GL ++G N AL LF +M G KP+ I FIGVL+AC+H GLVD+GR++F+ M Y
Sbjct: 330 IIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEY 389
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
+I+P LEHYGCL+D+L RAG L+EA+ I +P N++I + +LL R +G +D+G
Sbjct: 390 KIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVI---WMSLLGGSRNHGKIDIG 446
Query: 513 EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGI 572
E A + ++ + + LL+N+YA++ WE V++VR+ M + G RK PGCSS+E G
Sbjct: 447 EYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGT 506
Query: 573 IHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+HEF+VGD SH + KEIY+ + M + L
Sbjct: 507 LHEFIVGDISHPQTKEIYAKMSEMKEKL 534
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 204/446 (45%), Gaps = 76/446 (17%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+++Q+ A + + +P ++L+ + P +L YA IF IQ L+ +N +IK
Sbjct: 31 EVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKC 90
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ + ++LF +L + PDNFT P V K LG V++G+++HG +K G D
Sbjct: 91 YVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD 149
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV-----------VSWNVSISGHVKCMRFE 171
+V S+++MY G+I +K+FD M DKDV VSWN I+G++K F+
Sbjct: 150 VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFD 209
Query: 172 DAVDVFRRMR----QGCNLM--------------------------PDEGTVVSTLSACT 201
A+++F +M NLM P T+VS LSA +
Sbjct: 210 SALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS 269
Query: 202 ALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
L L G+ IH Y+ + E I+G +L++MY KCGC+ A +F + K V WT+
Sbjct: 270 GLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTA 329
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
++ G I+G + A+ALF EM LKP+
Sbjct: 330 IIVGL--------------------------GIHGMA-----NHALALFLEMCKTGLKPN 358
Query: 321 KFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
I + +L C G ++ G+ + +NE +I L+++ + G +E+A
Sbjct: 359 AIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTI 418
Query: 380 YELR-EKDAASWTSIICGLAMNGKIN 404
+ + W S++ G +GKI+
Sbjct: 419 ENMPISPNKVIWMSLLGGSRNHGKID 444
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 8/267 (2%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
L+ +NL+I + G F ++ +F + + G P + T V AV L + KG +H
Sbjct: 223 LVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHS 282
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
Y+ K G E D + S+++MY G I + +F + K V W I G
Sbjct: 283 YMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANH 342
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--AL 230
A+ +F M + L P+ + L+AC ++ G++ + E + P + + L
Sbjct: 343 ALALFLEMCK-TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCL 401
Query: 231 LDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
+D+ C+ G L EA+ + MP + N + W S++ G N G++ D+ + + R I +
Sbjct: 402 VDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKI----DIGEYAAQRVIEVA 457
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIR 316
I Y+ + A ++ ++ +R
Sbjct: 458 PETIGCYILLSNMYAASGMWEKVSHVR 484
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/668 (30%), Positives = 345/668 (51%), Gaps = 80/668 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLA-------- 55
+ + I G Q + LN+L+ V+C L YA ++F I P +A
Sbjct: 34 RAVHGNIITFGFQPHAHILNRLIDVYC---KSSELDYARQLFDEISEPDKIARTTMVSGY 90
Query: 56 -------------------------YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
YN +I F+ ++ LF K++ G PD+FT
Sbjct: 91 CASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFT 150
Query: 91 YPFVFKAVGWL-GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK----ICNVKKL 145
Y V + + + K+ + H +K+G + T V N+++ +Y + + +K+
Sbjct: 151 YASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKV 210
Query: 146 FDEMPDKDVVSW--------------------------------NVSISGHVKCMRFEDA 173
FD++P+KD SW N ISG+V C +++A
Sbjct: 211 FDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEA 270
Query: 174 VDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD 232
+++ RRM G L DE T S + AC + L+LGK++H Y+ + +F+ N+L+
Sbjct: 271 LEMVRRMVSSGIEL--DEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVT 328
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
+Y KCG +EAR +F++MP K+++ W +++SGYV+ G + +A+ +F ++I+ W M
Sbjct: 329 LYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I+G + +E + LF M+ +P + + CA LGA G+ H + +
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGF 448
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
ALI MYAKCG++E+A ++F + D+ SW ++I L +G +A++++ +
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEE 508
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M+ G +PD ITF+ VL+ACSH GLVD+GR++FN+M VY+I P +HY LIDLL R+G
Sbjct: 509 MLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSG 568
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
EAE +I +P + ++ ALLS CR++GN+++G A L + + + L
Sbjct: 569 KFSEAESIIESLPFKPT---AEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYML 625
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+N+YA+ +WE+V VR+ M++ GV+K CS IE+ +H FLV D SH E + +Y
Sbjct: 626 LSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKY 685
Query: 593 LDRMAKTL 600
L + K +
Sbjct: 686 LQDLGKEM 693
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 160/349 (45%), Gaps = 68/349 (19%)
Query: 194 VSTLSACTALK--NLELGKEIHRYINQELEFTPIMG--NALLDMYCKCGCLSEARELFDE 249
+ L C L+ +L+L + +H I F P N L+D+YCK L AR+LFDE
Sbjct: 16 AANLRLCLPLRRTSLQLARAVHGNI-ITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RDIVLWTAMINGYVQFNRFDEAVA 307
+ + I T+MVSGY G + AR +F+ +PV RD V++ AMI G+ N A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 308 LFREMQIIRLKPDKFILVALLTG----------CAQL--GALEQGKWIHGYINENRITVD 355
LF +M+ KPD F ++L G C Q AL+ G GY+
Sbjct: 135 LFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGA---GYVTS------ 185
Query: 356 AVVATALIEMYAKCG----LIEKALEIFYELREKDAASWTSIICGLAMNGKIN------- 404
V+ AL+ +Y++C L+ A ++F ++ EKD SWT+++ G NG +
Sbjct: 186 --VSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLK 243
Query: 405 -------------------------KALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
+ALE+ +M+S G + D+ T+ V+ AC++ L+
Sbjct: 244 GMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQ 303
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
G++ + ++ L+ L + G +EA + K+P ++
Sbjct: 304 LGKQVHAYVLRREDFSFHFDN--SLVTLYYKCGKFNEARAIFEKMPAKD 350
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 206/598 (34%), Positives = 341/598 (57%), Gaps = 37/598 (6%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ A ++++G Q + L+ + GN+ A ++F I ++++ ++ +A+
Sbjct: 126 VHAYVYKLGHQADAFVGTALID--AYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
SLLLF ++R G P+NFT K+ L K G+ VHG +K + D YV
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVG 243
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
+++++Y G+I ++ F+EMP D++ W++ IS + + + ++A+++F RMRQ +
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVV 303
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARE 245
+P+ T S L AC +L L LG +IH + + L+ + NAL+D+Y KC
Sbjct: 304 VPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKC-------- 355
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
G++E + LF S ++ V W +I GYVQ ++A
Sbjct: 356 -----------------------GEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKA 392
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ LF M + ++P + ++L A L ALE G+ IH + D+VVA +LI+M
Sbjct: 393 LNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDM 452
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
YAKCG I+ A F ++ ++D SW ++ICG +++G +AL LF M +KP+ +TF
Sbjct: 453 YAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTF 512
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
+GVLSACS+ GL+D+GR F +M + Y I+P +EHY C++ LLGR+G DEA +LI +IP
Sbjct: 513 VGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIP 572
Query: 486 NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWED 545
+ + V ++ ALL AC I+ N+D+G+ A + ++E +D + H LL+N+YA+A RW++
Sbjct: 573 FQPS---VMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDN 629
Query: 546 VTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
V VR+ MK+ V+K PG S +E G++H F VGD SH +K I++ML+ + K D+
Sbjct: 630 VAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDA 687
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 215/482 (44%), Gaps = 65/482 (13%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G+ +H +++K G D + N +++ Y G + + KLFDEMP + VS+ G +
Sbjct: 22 GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM 226
+F+ A + R+ + G E+++++ FT ++
Sbjct: 82 SHQFQRARRLLLRLFRE-------------------------GYEVNQFV-----FTTLL 111
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
L+ M CLS ++ + T+++ Y CG ++ AR +FD +D+
Sbjct: 112 -KLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDM 170
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V WT M+ Y + ++++ LF +M+I+ +P+ F + A L C L A + GK +HG
Sbjct: 171 VSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGC 230
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
+ D V AL+E+Y K G I +A + F E+ + D W+ +I A + K +A
Sbjct: 231 ALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEA 290
Query: 407 LELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
LELF +M S P++ TF VL AC+ L++ G + + + +V + + L+
Sbjct: 291 LELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKV-GLDSNVFVSNALM 349
Query: 466 DLLGRAGLLDEAEELIRKIPNEN----NEIIVPL-------------------------- 495
D+ + G ++ + +L +N N IIV
Sbjct: 350 DVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEV 409
Query: 496 -YGALLSACRIYGNVDMGEKLAAL-LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
Y ++L A ++ G ++ +L ++ + +KDS L ++YA R +D KM
Sbjct: 410 TYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKM 469
Query: 554 KE 555
+
Sbjct: 470 DK 471
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 324/574 (56%), Gaps = 30/574 (5%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q + Q Q P++L + FC P G +P L + LI+++
Sbjct: 28 QNERQNHQTQSPSLPKSLKQGSDFC--PGKG-------------TPSLSNWCHLIRSYLS 72
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+G+ R++LL+++ LR +GV P V KA L VK G+ +H +K G++FD +
Sbjct: 73 QGAPREALLVYTGLRRKGVYLLGVA-PLVLKACASLSIVKHGKALHAESIKNGVDFDVMI 131
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
S++ MY G + + +K+FD MP+++ V+WN I G++ + AV +F +M
Sbjct: 132 GTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMS---- 187
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
+ T + + + E + + EL + ++D Y + + ARE
Sbjct: 188 -IRTAVTWIEMIDGFARSGDTETARRFFDDVPSELR-NVVTWTVMVDGYARNAEMEAARE 245
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+F+ MP +N W+SM+SGY G +++AR +FDR PVR++V W ++I+GY Q +EA
Sbjct: 246 VFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEA 305
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ F +MQ +PD+ + ++L+ C+QLG L+ GK IH +N I ++ V L++M
Sbjct: 306 LEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDM 365
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
YAKCG + A IF + ++ A W S+I G A++G+ +ALE F +M PD+ITF
Sbjct: 366 YAKCGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITF 425
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
+ VLSAC+HGG V+ G F+ M E Y + ++HYGCLIDLLGRAG + EA +LI+++P
Sbjct: 426 LSVLSACAHGGFVNAGLEIFSRM-EKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMP 484
Query: 486 NENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS----SFHTLLANIYASAN 541
+ N+++ +GALL ACR++ +++M +++ + K++S S S + LL+NIYA+++
Sbjct: 485 VKPNDVV---WGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASD 541
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
RWE +R +M G +K GCSSI HE
Sbjct: 542 RWEKAEKMRMEMANKGFQKTSGCSSIMPGNNTHE 575
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 210/592 (35%), Positives = 322/592 (54%), Gaps = 42/592 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K+I A + + G + + + N L+ + G++ A +F + +++N +I +
Sbjct: 218 KEIHAHVIRFGFESDVDVGNALITM--YVKCGDISNARMLFDKMPKRDRISWNAMISGYF 275
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + L LFS +RE V PD T V A L + G VHGYVVK+ D
Sbjct: 276 ENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDIS 335
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QG 183
+ NS++ MY LG++ + +F M KDVVSW I+ V AV+ ++ M +G
Sbjct: 336 MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEG 395
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
++PDE T+VS LSAC + +L+LG +H I L I+ N+L+DMY KC C+
Sbjct: 396 --ILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A E+F + KN +V WT++I G NR
Sbjct: 454 ALEVFRNISGKN-------------------------------VVSWTSLILGLRINNRS 482
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ FR+M+ +KP+ L+++L+ CA++GAL +GK IH + + D + A+
Sbjct: 483 FEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++MY +CG AL F ++KD +W ++ G A G+ A+ELF +M+ PD+
Sbjct: 542 LDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE 600
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITFI +L ACS G+V EG +FN M Y + P L+HY C++D+LGRAG LD+A + I+
Sbjct: 601 ITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQ 660
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + I +GALL+ACRI+ NV++GE A + + ++K ++ LL N+YA
Sbjct: 661 DMPIRPDAAI---WGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGN 717
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
W+ V+ VR M+E G+ PGCS +EI G +H FL GD SHS+ KEI +LD
Sbjct: 718 WDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLD 769
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 220/480 (45%), Gaps = 38/480 (7%)
Query: 13 QIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLL--AYNLLIKAFAKKGSFR 70
Q+ NP+TL+ TH + G+ S + NL ++ +G+
Sbjct: 20 QVPNNHNPKTLSFSKNLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNLELRELCLQGNLE 79
Query: 71 KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
+++ + E + + Y + + W +G +V+ V + + N+++
Sbjct: 80 QAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALL 139
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
M+ G + + +F +M ++DV SWNV + G+ K F++A++++ RM + P+
Sbjct: 140 SMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWA-EIRPNV 198
Query: 191 GTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T S L C + ++ GKEIH + I E +GNAL+ MY KCG +S AR LFD+
Sbjct: 199 YTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 250 MPNKNVICWTSMVSGYV-NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
MP ++ I W +M+SGY N G L E + L
Sbjct: 259 MPKRDRISWNAMISGYFENGGGL--------------------------------EGLEL 286
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F M+ + + PD + + + C L G+ +HGY+ ++ D + +LI+MY+
Sbjct: 287 FSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSS 346
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
G +E+A +F + KD SWT++I L + KA+E + M G PD+IT + V
Sbjct: 347 LGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSV 406
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
LSAC+ G +D G R + + + LID+ + +D A E+ R I +N
Sbjct: 407 LSACACIGHLDLGIRLHEIAIKTGLVSHVIVS-NSLIDMYSKCKCVDNALEVFRNISGKN 465
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 210/592 (35%), Positives = 322/592 (54%), Gaps = 42/592 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K+I A + + G + + + N L+ + G++ A +F + +++N +I +
Sbjct: 218 KEIHAHVIRFGFESDVDVGNALITM--YVKCGDISNARMLFDKMPKRDRISWNAMISGYF 275
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + L LFS +RE V PD T V A L + G VHGYVVK+ D
Sbjct: 276 ENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDIS 335
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QG 183
+ NS++ MY LG++ + +F M KDVVSW I+ V AV+ ++ M +G
Sbjct: 336 MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEG 395
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
++PDE T+VS LSAC + +L+LG +H I L I+ N+L+DMY KC C+
Sbjct: 396 --ILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A E+F + KN +V WT++I G NR
Sbjct: 454 ALEVFRNISGKN-------------------------------VVSWTSLILGLRINNRS 482
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ FR+M+ +KP+ L+++L+ CA++GAL +GK IH + + D + A+
Sbjct: 483 FEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++MY +CG AL F ++KD +W ++ G A G+ A+ELF +M+ PD+
Sbjct: 542 LDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE 600
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITFI +L ACS G+V EG +FN M Y + P L+HY C++D+LGRAG LD+A + I+
Sbjct: 601 ITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQ 660
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + I +GALL+ACRI+ NV++GE A + + ++K ++ LL N+YA
Sbjct: 661 DMPIRPDAAI---WGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGN 717
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
W+ V+ VR M+E G+ PGCS +EI G +H FL GD SHS+ KEI +LD
Sbjct: 718 WDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLD 769
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 220/480 (45%), Gaps = 38/480 (7%)
Query: 13 QIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLL--AYNLLIKAFAKKGSFR 70
Q+ NP+TL+ TH + G+ S + NL ++ +G+
Sbjct: 20 QVPNNHNPKTLSFSKNLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNLELRELCLQGNLE 79
Query: 71 KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
+++ + E + + Y + + W +G +V+ V + + N+++
Sbjct: 80 QAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALL 139
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
M+ G + + +F +M ++DV SWNV + G+ K F++A++++ RM + P+
Sbjct: 140 SMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWA-EIRPNV 198
Query: 191 GTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T S L C + ++ GKEIH + I E +GNAL+ MY KCG +S AR LFD+
Sbjct: 199 YTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 250 MPNKNVICWTSMVSGYV-NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
MP ++ I W +M+SGY N G L E + L
Sbjct: 259 MPKRDRISWNAMISGYFENGGGL--------------------------------EGLEL 286
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F M+ + + PD + + + C L G+ +HGY+ ++ D + +LI+MY+
Sbjct: 287 FSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSS 346
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
G +E+A +F + KD SWT++I L + KA+E + M G PD+IT + V
Sbjct: 347 LGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSV 406
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
LSAC+ G +D G R + + + LID+ + +D A E+ R I +N
Sbjct: 407 LSACACIGHLDLGIRLHEIAIKTGLVSHVIVS-NSLIDMYSKCKCVDNALEVFRNISGKN 465
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 346/638 (54%), Gaps = 46/638 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q A+I + G Q + KL+ ++ ++ A+ I SI P + +++ LI A K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIA--SYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTK 93
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
F +S+ +FS++ G+ PD P +FK L K G+++H +GL+ D +V
Sbjct: 94 AKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFV 153
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVV------------------------------ 155
S+ MY G++ + +K+FD M +KDVV
Sbjct: 154 QGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGI 213
Query: 156 -----SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
SWN +SG + ++AV +F++M PD+ TV S L + +NL +G+
Sbjct: 214 EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHH-LGFCPDQVTVSSVLPSVGDSENLNMGR 272
Query: 211 EIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+IH Y I Q L + +A+LDMY K G + +LFDE + ++G G
Sbjct: 273 QIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNG 332
Query: 270 QLEKARDLF----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
++KA ++F ++ ++V WT++I G Q + EA+ LFREMQ+ +KP++ +
Sbjct: 333 LVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIP 392
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L C + AL G+ HG+ + D V +ALI+MYAKCG I+ + +F + K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTK 452
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ W S++ G +M+GK + + +F ++ KPD I+F +LSAC GL DEG ++F
Sbjct: 453 NLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
N M+E Y I+P+LEHY C+++LLGRAG L EA +LI++IP E + + +GALL++CR+
Sbjct: 513 NMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCV---WGALLNSCRL 569
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
NVD+ E A L +E ++ + L++NIYA+ W +V ++R KM+ +G++K PGCS
Sbjct: 570 QNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
I++ ++ L D SH ++ +I +D +++ + S
Sbjct: 630 WIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKS 667
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 197/424 (46%), Gaps = 44/424 (10%)
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
K + H ++K+G + D Y+ ++ Y + + +PD V S++ I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
K F ++ VF RM L+PD + + C L + GK+IH L+
Sbjct: 93 KAKLFSQSIGVFSRMFSH-GLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDA 151
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF---DRS 281
+ +L MY +CG + +AR++FD M K+V+ ++++ GY G LE+ + ++S
Sbjct: 152 FVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKS 211
Query: 282 PVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
+ +IV W +++G+ + EAV +F++M + PD+ + ++L L G
Sbjct: 212 GIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMG 271
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKC------------------------------- 369
+ IHGY+ + + D V +A+++MY K
Sbjct: 272 RQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRN 331
Query: 370 GLIEKALEIFYELREK----DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
GL++KALE+F +E+ + SWTSII G A NGK +ALELF +M G KP+ +T
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAEELIRKI 484
+L AC + + GR V+ + H G LID+ + G + ++ + +
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDDV--HVGSALIDMYAKCGRIKMSQIVFNMM 449
Query: 485 PNEN 488
P +N
Sbjct: 450 PTKN 453
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 299/500 (59%), Gaps = 11/500 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL--FDEMPDKDVVSWNVSISGHV 165
++VH ++++ GL +YV ++ M + L F ++ + W I G+
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP- 224
++ + + RMR+ + P T + AC A N++LGK++H F
Sbjct: 119 LQGLLSESTNFYTRMRRD-GVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 177
Query: 225 -IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+GN+++D+Y KCG L AR++FDEM ++V+ WT ++ Y G +E A LFD P+
Sbjct: 178 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPL 237
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+D+V WTAM+ GY Q R EA+ F++MQ + ++ D+ L +++ CAQLGA++ WI
Sbjct: 238 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 297
Query: 344 HGYINENRI--TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+ + + VV +ALI+MY+KCG ++A ++F ++E++ S++S+I G AM+G
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ + AL+LF M+ +P+ +TFIG+LSACSH GLV++GR+ F M + + + P +HY
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 417
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++DLLGRAG L+EA +L++ +P E N + +GALL ACRI+GN D+ + A L K
Sbjct: 418 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGV---WGALLGACRIHGNPDIAQIAANELFK 474
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE-INGIIHEFLVGD 580
+E + LL+NIYASA RWE+V+ +R+ ++E G +K PGCS E NG IH+F GD
Sbjct: 475 LEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGD 534
Query: 581 PSHSEMKEIYSMLDRMAKTL 600
+H EI L ++ + L
Sbjct: 535 TTHPRSSEIRQALKQLIERL 554
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 203/443 (45%), Gaps = 71/443 (16%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q+KQ+ A I + GL Q L KL+ T Y +FG + P + +I+
Sbjct: 56 SQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIR 115
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT-GLE 120
+A +G +S ++++R GV P +FT+ +FKA G + G++VH + G
Sbjct: 116 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 175
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS------------------------ 156
D YV NS++D+Y G + +K+FDEM ++DVVS
Sbjct: 176 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 235
Query: 157 -------WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
W ++G+ + R ++A++ F++M Q + DE T+ +SAC L ++
Sbjct: 236 PLKDMVAWTAMVTGYAQNGRPKEALEYFQKM-QDVGMETDEVTLAGVISACAQLGAVKHA 294
Query: 210 KEIHRYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
I R I + F P ++G+AL+DMY KCG EA ++F+ M +NV ++SM+ GY
Sbjct: 295 NWI-RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGY 353
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G R A+ LF +M ++P+K +
Sbjct: 354 AMHG-------------------------------RAHSALQLFHDMLKTEIRPNKVTFI 382
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELR- 383
+L+ C+ G +EQG+ + + + + A ++++ + G +E+AL++ +
Sbjct: 383 GILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPM 442
Query: 384 EKDAASWTSIICGLAMNGKINKA 406
E + W +++ ++G + A
Sbjct: 443 EPNGGVWGALLGACRIHGNPDIA 465
>gi|296083914|emb|CBI24302.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 297/525 (56%), Gaps = 43/525 (8%)
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
L +N L+ + + + +LLL++++ S ++FT+ A L + K ++H
Sbjct: 46 LIFNTLLPSLSPQ----DALLLYNQMVLHRTSHNHFTFTHALIASSSLHALHKTLEIHAR 101
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
+K+G D ++ N+++ Y V K +F + DVVSW ISG KC E+A
Sbjct: 102 AIKSGHYSDIFIQNTLLHSYVVENNFVFAKSVFKSISSPDVVSWTSIISGLSKCGFDEEA 161
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF-TPIMGNALLD 232
+ F M ++ P+ T+VS +SAC L+ + GK IH Y + ++ I+ NALLD
Sbjct: 162 IGEFLSM----DVKPNTSTLVSVVSACCGLRAVRFGKAIHGYSLRSMDGDNIILDNALLD 217
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
Y KCG L A+ LF +M ++VI WT+MV G G E+A ++F AM
Sbjct: 218 FYVKCGYLVSAKYLFMKMFRRDVISWTTMVGGLAQGGLCEEAVEVFQ-----------AM 266
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR- 351
+ G EAV P++ LV +LT C+ L AL G+W+H YI+
Sbjct: 267 VKG-------GEAV------------PNEVTLVNVLTACSSLSALNLGRWVHSYISTRYD 307
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ VD V ALI MYAKC + A+ +F EL KD SW++II G+AMNG AL+ FS
Sbjct: 308 LVVDGNVGNALINMYAKCSDMYMAVRVFNELTHKDMISWSTIIGGMAMNGHGMHALQFFS 367
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
M+ G PDD+TFIG+LSACSH GLV++G FF M VY I P+++HY C++D+ GRA
Sbjct: 368 LMLVHGVSPDDVTFIGLLSACSHAGLVEQGLIFFKAMNNVYGIAPQMQHYACMVDMYGRA 427
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
GLL+EAE IR +P E P++GALL+AC+I+GN M ++ L +
Sbjct: 428 GLLEEAEAFIRGMPMEAEG---PIWGALLNACKIHGNEKMFGRIDQSLRNAKGVSIGTLA 484
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
LL+N YAS+NRW+D VR M++MG++K+ GCS IE++ +I+ +
Sbjct: 485 LLSNTYASSNRWDDANKVRDMMRDMGLKKMSGCSWIEVDAMINRY 529
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 189/382 (49%), Gaps = 44/382 (11%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
N ++A+ +F SI SP ++++ +I +K G +++ F + V P+ T V
Sbjct: 126 NFVFAKSVFKSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSMD---VKPNTSTLVSVVS 182
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A L V+ G+ +HGY +++ + + N+++D Y G + + K LF +M +DV+S
Sbjct: 183 ACCGLRAVRFGKAIHGYSLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDVIS 242
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
W + G + E+AV+VF+ M +G +P+E T+V+ L+AC++L L LG+ +H YI
Sbjct: 243 WTTMVGGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTACSSLSALNLGRWVHSYI 302
Query: 217 NQ--ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ +L +GNAL++MY KC + A +F+E+ +K++I W++++ G
Sbjct: 303 STRYDLVVDGNVGNALINMYAKCSDMYMAVRVFNELTHKDMISWSTIIGGMA-------- 354
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+NG+ A+ F M + + PD + LL+ C+
Sbjct: 355 ------------------MNGHGM-----HALQFFSLMLVHGVSPDDVTFIGLLSACSHA 391
Query: 335 GALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTS 392
G +EQG + N I +++MY + GL+E+A + E + W +
Sbjct: 392 GLVEQGLIFFKAMNNVYGIAPQMQHYACMVDMYGRAGLLEEAEAFIRGMPMEAEGPIWGA 451
Query: 393 II--CGLAMN----GKINKALE 408
++ C + N G+I+++L
Sbjct: 452 LLNACKIHGNEKMFGRIDQSLR 473
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 209/668 (31%), Positives = 350/668 (52%), Gaps = 89/668 (13%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I + I ++G + + N L+ + G+L A ++F ++ L+++N +I +A++
Sbjct: 407 IHSHISEVGHSSDVQIGNSLISM--YARCGDLPRARELFNTMPKRDLISWNAIIAGYARR 464
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
+++ L+ +++ GV P T+ + A G+ +H ++++G++ + ++
Sbjct: 465 EDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLA 524
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N++M+MY G I + +F+ +D++SWN I+GH + +E A +F M++ L
Sbjct: 525 NALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKE-GL 583
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARE 245
PD+ T S L C + LELG++IH I + L+ +GNAL++MY +CG L +A E
Sbjct: 584 EPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYE 643
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR------SPVR--------------- 284
+F + ++NV+ WT+M+ G+ + G+ KA +LF + PV+
Sbjct: 644 VFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSAC 703
Query: 285 ------------------DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV- 325
D + A+I+ Y + +A +F +M P++ I+
Sbjct: 704 LDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKM------PNRDIMSW 757
Query: 326 -ALLTGCAQLG-----------------------------------ALEQGKWIHGYINE 349
++ G AQ G ALE+GK +H I +
Sbjct: 758 NKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVK 817
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
++ D V ALI MYAKCG +E+A E+F EK+ +W ++I A +G +KAL+
Sbjct: 818 RKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDF 877
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
F+ M G KPD TF +LSAC+H GLV EG R F+++ + + P +EHYGCL+ LLG
Sbjct: 878 FNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLG 937
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
RAG EAE LI ++P + + + LL ACRI+GNV + E A K+ +++ +
Sbjct: 938 RAGRFQEAETLINQMPFPPDAAV---WETLLGACRIHGNVALAEHAANNALKLNARNPAV 994
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+ LL+N+YA+A RW+DV +R+ M+ G+RK PG S IE++ IIHEF+ D SH E EI
Sbjct: 995 YVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEI 1054
Query: 590 YSMLDRMA 597
Y L R++
Sbjct: 1055 YEELKRLS 1062
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 230/455 (50%), Gaps = 36/455 (7%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A++ + ++ YN LI A A+ G + ++ + ++R GV + TY V
Sbjct: 333 GDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVL 392
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A + GE +H ++ + G D + NS++ MY G + ++LF+ MP +D++
Sbjct: 393 NACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLI 452
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I+G+ + +A+ ++++M Q + P T + LSACT GK IH
Sbjct: 453 SWNAIIAGYARREDRGEAMKLYKQM-QSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHED 511
Query: 216 I-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I ++ + NAL++MY +CG + EA+ +F+ +++I W SM++G
Sbjct: 512 ILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAG---------- 561
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+ Q ++ A LF EM+ L+PDK ++L GC
Sbjct: 562 ---------------------HAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNP 600
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
ALE G+ IH I E+ + +D + ALI MY +CG ++ A E+F+ LR ++ SWT++I
Sbjct: 601 EALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMI 660
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF-NTMTEVYQ 453
G A G+ KA ELF QM + G KP TF +L AC +DEG++ + + Y+
Sbjct: 661 GGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYE 720
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ + + LI ++G + +A ++ K+PN +
Sbjct: 721 LDTGVGN--ALISAYSKSGSMTDARKVFDKMPNRD 753
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 224/443 (50%), Gaps = 35/443 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ + K+I AQ+ + G+ P+ ++ + ++ A ++F + ++++N LI
Sbjct: 98 LAEAKRIHAQMVEAGV--GPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLI 155
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A++G +K+ LF +++ G P TY + A E++ G+K+H +++ G +
Sbjct: 156 SCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQ 215
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V NS+++MYG + + +++F + +DVVS+N + + + E+ + +F +M
Sbjct: 216 RDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQM 275
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
+ PD+ T ++ L A T L+ GK IH+ +N+ L
Sbjct: 276 SSE-GIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGL------------------- 315
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
N ++ T++ + +V CG + A+ + RD+V++ A+I Q
Sbjct: 316 ------------NSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQH 363
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
++EA + +M+ + ++ +++L C+ AL G+ IH +I+E + D +
Sbjct: 364 GHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIG 423
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+LI MYA+CG + +A E+F + ++D SW +II G A +A++L+ QM S G K
Sbjct: 424 NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 420 PDDITFIGVLSACSHGGLVDEGR 442
P +TF+ +LSAC++ +G+
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGK 506
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 34/386 (8%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+ + +++H +V+ G+ D ++ N +++MY + + ++F +MP +DV+SWN IS
Sbjct: 98 LAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISC 157
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
+ + + A +F M Q +P + T +S L+AC + LE GK+IH + I +
Sbjct: 158 YAQQGFKKKAFQLFEEM-QTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQR 216
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
P + N+LL+MY KC +++P+ AR +F
Sbjct: 217 DPRVQNSLLNMYGKC----------EDLPS---------------------ARQVFSGIY 245
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RD+V + M+ Y Q +E + LF +M + PDK + LL L++GK
Sbjct: 246 RRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKR 305
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH + D V TAL M+ +CG + A + ++D + ++I LA +G
Sbjct: 306 IHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGH 365
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+A E + QM S G + T++ VL+ACS + G + ++EV ++
Sbjct: 366 YEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH-SSDVQIGN 424
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNEN 488
LI + R G L A EL +P +
Sbjct: 425 SLISMYARCGDLPRARELFNTMPKRD 450
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 190/466 (40%), Gaps = 62/466 (13%)
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK----EI 212
W I H +R V F P E ST +A A NL K E
Sbjct: 6 WRSVIRTHTGSLRRVAGVCEF-----SVRPWPAEQNRSSTGAAGGASSNLVSVKVMRDEQ 60
Query: 213 HRYINQE-----LEFTPIMGN--ALLDMYCKCG---CLSEARELFDEMP----NKNVICW 258
HR +E + P N A +D+ C L+EA+ + +M ++
Sbjct: 61 HRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLS 120
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
+++ YV C + A +F + P RD++ W ++I+ Y Q +A LF EMQ
Sbjct: 121 NLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFI 180
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
P K +++LT C LE GK IH I E D V +L+ MY KC + A ++
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQV 240
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
F + +D S+ +++ A + + + LF QM S G PD +T+I +L A + ++
Sbjct: 241 FSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSML 300
Query: 439 DEGRR----------------------FFNTMTEVYQIQPKLEH--------YGCLIDLL 468
DEG+R F +V + LE Y LI L
Sbjct: 301 DEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAAL 360
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI-ESKDS 527
+ G +EA E ++ ++ + Y ++L+AC + GE + + + ++ S D
Sbjct: 361 AQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
L ++YA R D+ R+ M R + I N II
Sbjct: 421 QIGNSLISMYA---RCGDLPRARELFNTMPKRDL-----ISWNAII 458
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 287/473 (60%), Gaps = 42/473 (8%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+H + +K G E +V N+++ MY + G++ +K+FD M D+D+VSWN I G+ +
Sbjct: 44 SSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQY 103
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIM 226
++++ + +F M N+ D T+V + AC+ L + E + +YI + LE +
Sbjct: 104 NKYKEVLRLFDAM-TAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYL 162
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
GN L+DMY + G L+ AR+ LFD P RD+
Sbjct: 163 GNTLIDMYGRLGNLTAARK-------------------------------LFDNMPKRDV 191
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
+ WT+MI GY Q ++F +AV LF+EM ++KPDK + ++L+ CA LG L+ G +H Y
Sbjct: 192 ISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHY 251
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I + + D V +LI+MY KCG++EKALE+F+ +++KD+ SWTS+I GLA+NG N A
Sbjct: 252 IRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSA 311
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L+LFSQM+ G +P TF+G+L AC+H GLV++G +F +M V+ + P ++HYGC++D
Sbjct: 312 LDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVD 371
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIE 523
LL R+G +D+A E I+K+P IVP ++ LLSAC+++GNV + E L +++
Sbjct: 372 LLSRSGNIDKAYEFIKKMP------IVPDVVVWRILLSACKLHGNVVLAEIATKRLLELD 425
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
DS + LL+N YA +RW+D +R+ M++ V+K G SSIE++G++ +
Sbjct: 426 PCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMVSNY 478
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 188/377 (49%), Gaps = 47/377 (12%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L +A+K+F + L+++N LI +++ +++ L LF + + D T +
Sbjct: 73 GQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKII 132
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG+ + + + Y+ + LE D Y+ N+++DMYG LG + +KLFD MP +DV+
Sbjct: 133 LACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVI 192
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW I+G+ + +F DAV +F+ M + PD+ TV S LSAC L L++G +H Y
Sbjct: 193 SWTSMITGYSQASQFSDAVKLFQEM-MAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHY 251
Query: 216 INQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I + ++ +GN+L+DMYCKCG + +A E+F M +K+ + WTS++SG
Sbjct: 252 IRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLA-------- 303
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+NG+ + A+ LF +M ++P V +L CA
Sbjct: 304 ------------------VNGFA-----NSALDLFSQMLREGVQPTHGTFVGILLACAHA 340
Query: 335 GALEQG-------KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKD 386
G + +G + +HG + + ++++ ++ G I+KA E ++ D
Sbjct: 341 GLVNKGLEYFESMESVHGLVPAMKHY------GCVVDLLSRSGNIDKAYEFIKKMPIVPD 394
Query: 387 AASWTSIICGLAMNGKI 403
W ++ ++G +
Sbjct: 395 VVVWRILLSACKLHGNV 411
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 209/621 (33%), Positives = 332/621 (53%), Gaps = 82/621 (13%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
++ +NLLI+A+A G + +++ L+ K+ G++P+ FT+PFV KA L E +G ++H
Sbjct: 84 VVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHC 143
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG-HVKCMRFE 171
+ + LE + YV +++D Y G + + K++FD+M +DVV+WN ISG + ++
Sbjct: 144 DIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYD 203
Query: 172 DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY---------------- 215
+ + +M+ ++ P+ T+V L A + +L GKEIH +
Sbjct: 204 EVARLLVQMQN--DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGI 261
Query: 216 ---------INQELEFTPIMG--------NALLDMYCKCGCLSEARELFDE--MPNKNVI 256
I+ +MG +A++ Y C + EA ELF + M +VI
Sbjct: 262 LDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVI 321
Query: 257 ---------------------------CWT-------------SMVSGYVNCGQLEKARD 276
C+ +++S Y CG + A
Sbjct: 322 VLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMR 381
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
F+ +RD V +TA+I+GYVQ +E + +F EMQ+ + P+K L ++L CA L
Sbjct: 382 FFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAG 441
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
L G H Y T D ++ ALI+MYAKCG I+ A ++F + ++ SW ++I
Sbjct: 442 LHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIA 501
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
++G +AL LF M S G KPDD+TFI ++SACSH GLV EG+ +FN MT+ + I P
Sbjct: 502 YGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIP 561
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
++EHY C++DLL RAGL E I K+P E + V ++GALLSACR+Y NV++GE ++
Sbjct: 562 RMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPD---VRVWGALLSACRVYKNVELGEGVS 618
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
++K+ + + LL+N+Y++ RW+D VR KE G K PGCS IEI+G++H F
Sbjct: 619 KKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTF 678
Query: 577 LVGD-PSHSEMKEIYSMLDRM 596
L G SH ++ +I + LD +
Sbjct: 679 LGGGYRSHPQLTQISNKLDEL 699
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 210/469 (44%), Gaps = 95/469 (20%)
Query: 129 IMDMYGVLGKICNVKKLFDEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
++D+Y ++ + +FD+MP K+VV WN+ I + +E+A+D++ +M G +
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKM-LGYGI 115
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARE 245
P+ T L AC+ALK G+EIH I + LE + AL+D Y KCGCL +A+E
Sbjct: 116 TPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKE 175
Query: 246 LFDEMPNKNVICWTSMVSGY-VNCGQLEKARDLF-----DRSP----------------- 282
+FD+M ++V+ W SM+SG+ ++ G ++ L D SP
Sbjct: 176 VFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNS 235
Query: 283 ----------------VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR---------- 316
V D+V+ T +++ Y + D A +F M I++
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVG 295
Query: 317 --------------------LKPDKFILVALLTG-----CAQLGALEQGKWIHGYINENR 351
LK D +L A+ CA L L G +H Y ++
Sbjct: 296 AYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSG 355
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+D +V L+ MYAKCG+I A+ F E+ +DA S+T+II G NG + L +F
Sbjct: 356 FVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFL 415
Query: 412 QMISGGAKPDDITFIGVLSACSH-GGLVDEGRRFFNTMTEVYQI----QPKLEHYGCLID 466
+M G P+ T VL AC+H GL + + + Y I LID
Sbjct: 416 EMQLSGINPEKATLASVLPACAHLAGL------HYGSCSHCYAIICGFTADTMICNALID 469
Query: 467 LLGRAGLLDEAEELI-----RKIPNENNEIIV-PLYGALLSACRIYGNV 509
+ + G +D A ++ R I + N II ++G L A ++ N+
Sbjct: 470 MYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNM 518
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 165/364 (45%), Gaps = 43/364 (11%)
Query: 40 YAEKIF---GSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL---RERGVSPDNFTYPF 93
YA +IF G +++ + ++ ++ A+ R++L LF +L ++ + T
Sbjct: 273 YARRIFDMMGIVKNE--VTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLAT 330
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD 153
V + L ++ G +H Y +K+G D V N+++ MY G I + F+EM +D
Sbjct: 331 VIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRD 390
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
VS+ ISG+V+ E+ + +F M Q + P++ T+ S L AC L L G H
Sbjct: 391 AVSFTAIISGYVQNGNSEEGLRMFLEM-QLSGINPEKATLASVLPACAHLAGLHYGSCSH 449
Query: 214 RY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
Y I ++ NAL+DMY KCG + AR++FD M + ++ W +M+ Y
Sbjct: 450 CYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAY------- 502
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+ I L EA+ LF MQ LKPD + L++ C+
Sbjct: 503 ---------GIHGIGL---------------EALLLFDNMQSEGLKPDDVTFICLISACS 538
Query: 333 QLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASW 390
G + +GK W + + I ++++ ++ GL ++ ++ E D W
Sbjct: 539 HSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVW 598
Query: 391 TSII 394
+++
Sbjct: 599 GALL 602
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 28/298 (9%)
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
L +C K+L GK IH+++ + CL E + N +V
Sbjct: 16 LESCIQSKSLFRGKLIHQHLLK--------------------CLHRTHE--TNLTNFDVP 53
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVR--DIVLWTAMINGYVQFNRFDEAVALFREMQI 314
+ +V Y+ C +L+ AR +FD+ P R ++VLW +I Y ++EA+ L+ +M
Sbjct: 54 -FEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLG 112
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ P++F +L C+ L +G+ IH I R+ + V+TAL++ YAKCG ++
Sbjct: 113 YGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDD 172
Query: 375 ALEIFYELREKDAASWTSIICGLAMN-GKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A E+F ++ ++D +W S+I G +++ G ++ L QM P+ T +GVL A +
Sbjct: 173 AKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVA 231
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
+ G+ + + G ++D+ G+ +D A + + NE+
Sbjct: 232 QVNSLRHGKEIHGFCVRRGFVGDVVVGTG-ILDVYGKCQCIDYARRIFDMMGIVKNEV 288
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A + F + +++ +I + + G+ + L +F +++ G++P+ T V A
Sbjct: 379 AMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAH 438
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L + G H Y + G DT +CN+++DMY GKI +K+FD M + +VSWN
Sbjct: 439 LAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTM 498
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I + +A+ +F M Q L PD+ T + +SAC+ + GK + Q+
Sbjct: 499 IIAYGIHGIGLEALLLFDNM-QSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDF 557
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
P M + ++D+ + G E ++MP +V W +++S
Sbjct: 558 GIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA 604
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 327 LLTGCAQLGALEQGKWIHGYI-------NENRITVDAVVATALIEMYAKCGLIEKALEIF 379
LL C Q +L +GK IH ++ +E +T V L+++Y C ++ A +F
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 380 YEL--REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
++ R K+ W +I A NG +A++L+ +M+ G P+ TF VL ACS
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
EGR + + +++ + L+D + G LD+A+E+ K+ + V +
Sbjct: 135 ASEGREIHCDIKRL-RLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRD----VVAWN 189
Query: 498 ALLSACRIY-GNVDMGEKLAALLEKIESKDSS 528
+++S ++ G+ D +L ++ S +SS
Sbjct: 190 SMISGFSLHEGSYDEVARLLVQMQNDVSPNSS 221
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 64/317 (20%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + ++++N +I A+ G ++LLLF ++ G+ PD+ T+ +
Sbjct: 475 GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLI 534
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A G V +G+ Y N++ +G++ ++ + + D + +
Sbjct: 535 SACSHSGLVAEGK---------------YWFNAMTQDFGIIPRMEHYACMVDLLSRAGL- 578
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
F++ +M L PD + LSAC KN+ELG+ + +
Sbjct: 579 --------------FKEVHSFIEKM----PLEPDVRVWGALLSACRVYKNVELGEGVSKK 620
Query: 216 INQELEFTP-IMGNALL--DMYCKCGCLSEAREL--------FDEMPNKNVICWTSMV-- 262
I + P GN +L +MY G +A ++ F++ P + I + +V
Sbjct: 621 IQK---LGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHT 677
Query: 263 ---SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA----VALFREMQ-- 313
GY + QL + + D V L + YV F +E V L+ +
Sbjct: 678 FLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYV-FQDVEEEEKERVLLYHSEKLA 736
Query: 314 ----IIRLKPDKFILVA 326
I+ L PDK I+V
Sbjct: 737 IAFGILSLSPDKHIIVT 753
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 202/581 (34%), Positives = 321/581 (55%), Gaps = 39/581 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + L+++N+++ + K G+ + LF+++ E+ V ++ +
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV----VSWNAMLSGFAQ 165
Query: 101 LGEVKKGEKVHGY-VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
G V++ K+ +VK + + N ++ Y G+I + ++LFD D ++VSWN
Sbjct: 166 NGFVEEARKIFDQMLVKNEISW-----NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNC 220
Query: 160 SISGHVKCMRFEDAVDVFRRM------------------------RQGCNLMPDEGTVVS 195
+ G+V+ R +DA +F RM R+ +P
Sbjct: 221 LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAW 280
Query: 196 TLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
T ++N L E R + E + NA++ Y + + +ARELFD+MP++N
Sbjct: 281 TAMVSGFVQNGML-DEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNT 339
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
W +MV+GY CG +++A+ LFD P RD + W AMI+GY Q + +EA+ LF +M+
Sbjct: 340 SSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRD 399
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
++ L L+ CA++ ALE GK +HG + + + AL+ MY KCG IE+A
Sbjct: 400 GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEA 459
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
++F ++ EKD SW ++I G A +G +AL LF M KPDD+T +GVLSACSH
Sbjct: 460 FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHT 518
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
G VD+G +FN+M + Y I +HY C+IDLLGRAG LDEA L++ +P +
Sbjct: 519 GFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD---AAT 575
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
+GALL A RI+G+ ++GEK A + ++E +S + LL+N+YA++ RW +V +R KM++
Sbjct: 576 WGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRD 635
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
GV+KVPG S +EI H F VGD SH E + IY+ L+ +
Sbjct: 636 KGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEEL 676
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 193/413 (46%), Gaps = 41/413 (9%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVC-NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++KG+ V G+ + V N+++ Y K +K+F++MPD+D++SWNV +S
Sbjct: 71 MRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLS 130
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
G+VK A +F N MP E VVS + + +E + +Q L
Sbjct: 131 GYVKNGNLSAARALF-------NQMP-EKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK 182
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
I N LL Y + G + +AR LFD + ++ W ++ GYV +L+ AR LFDR P
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-- 340
VRD + W MI GY Q EA LF E+ I D F A+++G Q G L++
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRLFEELPI----RDVFAWTAMVSGFVQNGMLDEATR 298
Query: 341 -----------KW---IHGYINENRI-----------TVDAVVATALIEMYAKCGLIEKA 375
W I GY+ +I + + ++ YA+CG I++A
Sbjct: 299 IFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQA 358
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F E+ ++D SW ++I G A +G+ +AL LF +M G + LS+C+
Sbjct: 359 KILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEI 418
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
++ G++ + + Q L+ + G+ G ++EA ++ I ++
Sbjct: 419 AALELGKQLHGRLVKA-GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKD 470
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 185/403 (45%), Gaps = 58/403 (14%)
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
D D+V WN IS +++ + E A+ VF MR+ + T + +S + + +
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTV-----TYNAMISGYLSNNKFDCAR 111
Query: 211 EI-HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG----- 264
++ + +++L I N +L Y K G LS AR LF++MP K+V+ W +M+SG
Sbjct: 112 KVFEKMPDRDL----ISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG 167
Query: 265 --------------------------YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
YV G++E AR LFD +IV W ++ GYV+
Sbjct: 168 FVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
R D+A +LF M + DK ++TG AQ G L + + + E D
Sbjct: 228 KKRLDDARSLFDRMPV----RDKISWNIMITGYAQNGLLSEAR----RLFEELPIRDVFA 279
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TA++ + + G++++A IF E+ EK+ SW ++I G + +I KA ELF QM S
Sbjct: 280 WTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNT 339
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
++ +++ + G +D+ + F+ M Q + +I ++G +EA
Sbjct: 340 S----SWNTMVTGYAQCGNIDQAKILFDEMP-----QRDCISWAAMISGYAQSGQSEEAL 390
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
L K+ + + LS+C +++G++L L K
Sbjct: 391 HLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 310/567 (54%), Gaps = 36/567 (6%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ +G + ++F + ++++ +I + G +++L+ FS++ V D++T+
Sbjct: 161 YTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTF 220
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
KA G + G ++H +K G + ++V N++ MY GK+ LF++M
Sbjct: 221 AIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM 280
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+DVVSW I+ V+ + E AV F RMR+ ++ P+E T + +S C L +E G++
Sbjct: 281 RDVVSWTTIITTLVQMGQEECAVQAFIRMRES-DVSPNEYTFAAVISGCANLARIEWGEQ 339
Query: 212 IHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H I + L + + N+++ MY KC GQ
Sbjct: 340 LHALILHLGLAASLSVENSIMTMYAKC-------------------------------GQ 368
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
L + +F RDIV W+ +I GY Q EA L M++ KP +F L ++L+
Sbjct: 369 LTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSA 428
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C + LE GK +H Y+ + A+V +ALI MY KCG IE+A IF D SW
Sbjct: 429 CGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSW 488
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
T++I G A +G + ++LF ++ G +PD +TFIGVLSACSH GLVD G R+FN M++
Sbjct: 489 TAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSK 548
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
YQI P EHYGC+IDLL RAG L +AE +I +P ++++ + LL ACR++G+V+
Sbjct: 549 KYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV---WSTLLRACRVHGDVE 605
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
G + A + ++E + H LANIYAS +W + ++R+ MK GV K PG S I++
Sbjct: 606 RGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVK 665
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMA 597
++ F+ GD SH + ++IY+MLD +A
Sbjct: 666 DLVFAFVAGDRSHPQGEDIYNMLDLLA 692
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFIL 324
V G L AR +FD+ +D + WT +I+GYV N EA+ LF+ M++ L+ D FIL
Sbjct: 60 VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
C + G+ +HGY + + V +AL++MY K G I + +F+E+
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
++ SWT+II GL G +AL FS+M + D TF L AC+ G ++ GR
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239
Query: 445 F---------------NTMTEVYQIQPKLEH---------------YGCLIDLLGRAGLL 474
NT+ +Y KLE+ + +I L + G
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 299
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ A + ++ + + A++S C ++ GE+L AL+
Sbjct: 300 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 298/500 (59%), Gaps = 11/500 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL--FDEMPDKDVVSWNVSISGHV 165
++VH ++++ GL +YV ++ M + L F ++ + W I G+
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP- 224
++ + + RMR+ + P T + AC A N++LGK++H F
Sbjct: 119 LQGLLSESTNFYTRMRRD-GVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 177
Query: 225 -IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+GN+++D+Y KCG L AR++FDEM ++V+ WT ++ Y G +E A LFD P
Sbjct: 178 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPS 237
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+D+V WTAM+ GY Q R EA+ F++MQ + ++ D+ L +++ CAQLGA++ WI
Sbjct: 238 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 297
Query: 344 HGYINENRI--TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+ + + VV +ALI+MY+KCG ++A ++F ++E++ S++S+I G AM+G
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ + AL+LF M+ +P+ +TFIG+LSACSH GLV++GR+ F M + + + P +HY
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 417
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++DLLGRAG L+EA +L++ +P E N + +GALL ACRI+GN D+ + A L K
Sbjct: 418 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGV---WGALLGACRIHGNPDIAQIAANELFK 474
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE-INGIIHEFLVGD 580
+E + LL+NIYASA RWE+V+ +R+ ++E G +K PGCS E NG IH+F GD
Sbjct: 475 LEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGD 534
Query: 581 PSHSEMKEIYSMLDRMAKTL 600
+H EI L ++ + L
Sbjct: 535 TTHPRSSEIRQALKQLIERL 554
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 203/443 (45%), Gaps = 71/443 (16%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q+KQ+ A I + GL Q L KL+ T Y +FG + P + +I+
Sbjct: 56 SQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIR 115
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT-GLE 120
+A +G +S ++++R GV P +FT+ +FKA G + G++VH + G
Sbjct: 116 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 175
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEM------------------------------- 149
D YV NS++D+Y G + +K+FDEM
Sbjct: 176 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 235
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P KD+V+W ++G+ + R ++A++ F++M Q + DE T+ +SAC L ++
Sbjct: 236 PSKDMVAWTAMVTGYAQNGRPKEALEYFQKM-QDVGMETDEVTLAGVISACAQLGAVKHA 294
Query: 210 KEIHRYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
I R I + F P ++G+AL+DMY KCG EA ++F+ M +NV ++SM+ GY
Sbjct: 295 NWI-RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGY 353
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G R A+ LF +M ++P+K +
Sbjct: 354 AMHG-------------------------------RAHSALQLFHDMLKTEIRPNKVTFI 382
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELR- 383
+L+ C+ G +EQG+ + + + + A ++++ + G +E+AL++ +
Sbjct: 383 GILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPM 442
Query: 384 EKDAASWTSIICGLAMNGKINKA 406
E + W +++ ++G + A
Sbjct: 443 EPNGGVWGALLGACRIHGNPDIA 465
>gi|449442521|ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 1 [Cucumis sativus]
gi|449442523|ref|XP_004139031.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 2 [Cucumis sativus]
Length = 517
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/520 (37%), Positives = 294/520 (56%), Gaps = 47/520 (9%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N L+ + L L++++ S ++FT+ + KA +L + +KG ++H +++
Sbjct: 31 FNPLLGSLVNSIFPENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLI 90
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K+G D ++ NS++ Y + G + + +FD +PD DVVSW ISG K ++A+
Sbjct: 91 KSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALS 150
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH----RYINQELEFTPIMGNALL 231
F M N+ P+ T+V+ LSAC++L+ L+LGK IH R +N+E I+ NALL
Sbjct: 151 KFLSM----NVRPNSTTLVTALSACSSLRCLKLGKAIHGLRMRTLNEE---NVILENALL 203
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
D Y V C L A +LF++ P RD+V WT
Sbjct: 204 DFY-------------------------------VRCAYLRSAENLFEKMPKRDVVSWTT 232
Query: 292 MINGYVQFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
MI GY Q +EAV +F+ M + P++ LV +L+ C+ + AL G+W+H YIN
Sbjct: 233 MIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSR 292
Query: 351 R-ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
+ +D V ALI MY KCG +E A+ IF + KD SW++II GLAMNG +A L
Sbjct: 293 HDVIIDGNVGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVL 352
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
FS M+ G PDDITF+G+LSACSHGGL+++G F M +VY I P++ HY C++D+ G
Sbjct: 353 FSLMLVHGVSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYG 412
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
+AGLLDEAE I+++P E P++GALL AC+++GN EK+ L +
Sbjct: 413 KAGLLDEAEAFIKEMPMEAEG---PVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGT 469
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
LL+N YA +RW D +VR M+ G++K+ G S IE+
Sbjct: 470 FALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEM 509
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GN+ A IF +I+ +++++ +I A G +++ +LFS + GVSPD+ T+ +
Sbjct: 313 GNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHGVSPDDITFLGLL 372
Query: 96 KAVGWLGEVKKGEKVHGY---VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
A G + +G V V + Y C ++DMYG G + + EMP
Sbjct: 373 SACSHGGLINQGMMVFEAMKDVYNISPQMRHYAC--MVDMYGKAGLLDEAEAFIKEMP 428
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 184/459 (40%), Positives = 275/459 (59%), Gaps = 5/459 (1%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN-LMPDEGTVVSTLSACTA 202
++ D + + ++N I H K + + R+ L PD T +
Sbjct: 64 QVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQ 123
Query: 203 LKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L G +H + E+ P + + L+ MY + G L +F + +++C T+M
Sbjct: 124 LLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAM 183
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
VS G + AR LFD+ +D + W AMI+GYVQ + EA++LF MQ +K ++
Sbjct: 184 VSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNE 243
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
+V++L+ C+ LGAL+QG+W H YI N++ + + TALI+MYAKCG + KA+E+F+
Sbjct: 244 VSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWG 303
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
++EK+ +W+S I GLAMNG K LELFS M +P++ITF+ VL CS GLV+EG
Sbjct: 304 MKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEG 363
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
R+ F +M++VY I+P+LEHYGC++DL GRAG LDEA I +P + V +GALL+
Sbjct: 364 RKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPH---VGAWGALLN 420
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
AC+IY N++MGE + + ++E+K+ + LL+NIYA + W+ V+NVRQ M GVRK
Sbjct: 421 ACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQ 480
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PGCS IE+ G +HEF VGD SH EI ML +++ L
Sbjct: 481 PGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRL 519
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 184/376 (48%), Gaps = 68/376 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LKQI Q+ GL +P+ + + + + NL Y+ ++ + Q+P L +N +I
Sbjct: 22 LRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTLFTFNSMI 81
Query: 61 KAFAKKGSFRKSLLLFSKLRERG--VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+A +K + +S +S++ ++PDN+T+ F+ + L G VHG VK G
Sbjct: 82 RAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYG 141
Query: 119 LEFDTYVCNSIMDMYGVLG----------KICN---------------------VKKLFD 147
E+D +V + ++ MY LG IC +KLFD
Sbjct: 142 FEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFD 201
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNL 206
+M KD ++WN ISG+V+C + +A+ +F M R+G + +E ++VS LSAC+ L L
Sbjct: 202 KMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKV--NEVSMVSVLSACSHLGAL 259
Query: 207 ELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
+ G+ H YI + +L T +G AL+DMY KCG +++A E+F M KNV W+S + G
Sbjct: 260 DQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGL 319
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G EK +LF M+ ++P++ V
Sbjct: 320 AMNGAGEKCLELFSL-------------------------------MKQDSVQPNEITFV 348
Query: 326 ALLTGCAQLGALEQGK 341
++L GC+ +G +E+G+
Sbjct: 349 SVLRGCSVVGLVEEGR 364
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 118/232 (50%), Gaps = 4/232 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ +A K+F + +A+N +I + + G R++L LF+ ++ GV + + V
Sbjct: 191 GDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVL 250
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + +G H Y+ + L + +++DMY G + ++F M +K+V
Sbjct: 251 SACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVY 310
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W+ +I G E +++F M+Q ++ P+E T VS L C+ + +E G++
Sbjct: 311 TWSSAIGGLAMNGAGEKCLELFSLMKQD-SVQPNEITFVSVLRGCSVVGLVEEGRKHFES 369
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG 264
+++ P + + ++D+Y + G L EA + MP + +V W ++++
Sbjct: 370 MSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNA 421
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 336/602 (55%), Gaps = 37/602 (6%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
T L QI A++ GLQ + KL+ ++ G + A K+F P + +N +++
Sbjct: 89 THLNQIYAKLLVTGLQYGGFLIAKLVNKASNI--GEVSCARKLFDKFPDPDVFLWNAIVR 146
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ G F ++ ++++++ VSPD F++P V KA L ++ G +VHG + + G E
Sbjct: 147 CYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFES 206
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D +V N ++ +Y G+I +F + D+ +VSW ISG+ + + +A+ +F MR
Sbjct: 207 DVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMR 266
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+ N+ PD +VS L A T +++LE GK IH ++ M +C
Sbjct: 267 K-TNVRPDWIALVSVLRAYTDVEDLEHGKSIH--------------GCVIKMGLECE--- 308
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
FD + S+ S Y CG + AR F++ ++ W AMI+GYV+
Sbjct: 309 -----FDLL--------ISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGY 355
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+EA+ LFR M+ ++PD + + + CAQ+G+LE +W+ YI+ + D +V T+
Sbjct: 356 AEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTS 415
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+ YAKCG ++ A +F + +KD W++++ G ++G+ +++ LF M G P+
Sbjct: 416 LIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPN 475
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
D+TF+G+L+AC + GLV+EG F+ M + Y I+P+ +HY C++DLLGRAG LD A +
Sbjct: 476 DVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDRAYNFV 534
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P E V ++GALLSAC+I+ +V +GE A L ++ ++ + L+N+YAS+
Sbjct: 535 MNMPIEPG---VSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSC 591
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
W+ V VR M+E G+ K G S IEING + F GD +H KEI+ ++ + + L
Sbjct: 592 LWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLK 651
Query: 602 DS 603
++
Sbjct: 652 EA 653
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 188/500 (37%), Positives = 286/500 (57%), Gaps = 18/500 (3%)
Query: 106 KGEKVHGYVVKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
+H ++K GL ++ +++ Y LG + ++LFDEMP++ +V H
Sbjct: 27 SASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAH 86
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC------TALKNLELGKEIHR-YIN 217
V + A+ VF M + PD V L AC TA +N GK IH +
Sbjct: 87 VASGQAAQAIAVFGDMVAD-GVFPDNVAVAVALGACHGAGSWTARRNP--GKMIHALVVT 143
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ + L+ +Y + G L +R +FD+MP+++ I W +M+ Y G+++ A ++
Sbjct: 144 SGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEM 203
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM---QIIRLKPDKFILVALLTGCAQL 334
F P RD+V W ++ GY R EA+ LFR+M + P+ + +L CA
Sbjct: 204 FLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGA 263
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSI 393
G LE G W+H YI NR+ D + LI+MY KCG I+ AL++F + R+KD SWT++
Sbjct: 264 GCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTV 323
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
ICGLAM+G+ AL +F M G PDD+T +GVL+AC+HGGLVDEG +F +M ++
Sbjct: 324 ICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFR 383
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I PK+EHYGC+IDLLGR G L EA +IR +P + N +I +GA LSAC+++GN+++G+
Sbjct: 384 ITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVI---WGAFLSACKVHGNMELGK 440
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
A L +++ D +L+++YA A W + R++M M V+K PGCSSIE+ G +
Sbjct: 441 IAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEV 500
Query: 574 HEFLVGDPSHSEMKEIYSML 593
HEF+ G H + EI S+L
Sbjct: 501 HEFVAGGSQHPQYAEICSVL 520
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 171/408 (41%), Gaps = 70/408 (17%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ +A ++F + L+ + +A G +++ +F + GV PDN
Sbjct: 59 GSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVAL 118
Query: 96 KAV----GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A W G+ +H VV +G+ D +V ++ +YG G++ +++FD+MP
Sbjct: 119 GACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPS 178
Query: 152 K-------------------------------DVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ DVVSWN ++G+ R +A+ +FR+M
Sbjct: 179 RSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQM 238
Query: 181 --RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC 237
C + P+ T+ + L AC LE G +H YI + + + L+DMYCKC
Sbjct: 239 VSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKC 298
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G + A ++F++ P K +DLF WT +I G
Sbjct: 299 GSIDNALQVFEKAPRK---------------------KDLFS---------WTTVICGLA 328
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDA 356
R +A+ +F MQ + PD LV +L CA G +++G + + + RIT
Sbjct: 329 MHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKI 388
Query: 357 VVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
+I++ + G +++A + + + + W + + ++G +
Sbjct: 389 EHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNM 436
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER---GVSPDNFTY 91
HG + A ++F ++ ++++N ++ + G R++L LF ++ V P+ T
Sbjct: 194 HGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTM 253
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP- 150
+ A G ++ G VH Y+ + + D Y+ ++DMY G I N ++F++ P
Sbjct: 254 STILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPR 313
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
KD+ SW I G R DA+ +F M Q + PD+ T+V L+AC ++ G
Sbjct: 314 KKDLFSWTTVICGLAMHGRTTDALRMF-DMMQDNGICPDDVTLVGVLNACAHGGLVDEGL 372
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVN 267
+ + TP + + ++D+ + G L EA + MP + N + W + +S
Sbjct: 373 GYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKV 432
Query: 268 CGQLE 272
G +E
Sbjct: 433 HGNME 437
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 179/458 (39%), Positives = 286/458 (62%), Gaps = 15/458 (3%)
Query: 157 WNV---SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
WN+ +I +V + + V+ RMR C + PD T L + +L LG+ H
Sbjct: 26 WNIIIRAIVHNVSPPQRHSPISVYFRMRHHC-VSPDFHTFPFLLPSFHNPIHLPLGQRTH 84
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
I L+ P + +LL+MY CG LS A +FDE +K++ W S+V+ Y G +
Sbjct: 85 AQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLIN 144
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI-----IRLKPDKFILVAL 327
AR LFD P R+++ W+ +INGYV ++ EA+ LFREMQ+ + + P+KF + +
Sbjct: 145 HARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTV 204
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKD 386
L+ C +LGALEQGKW+H YI++ + +D V+ TALI+MYAKCG +E+A +F L +KD
Sbjct: 205 LSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKD 264
Query: 387 AASWTSIICGLAMNGKINKALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+++++IC LAM G ++ ++FS+M S P+ +TF+G+L AC H GL+++G+ +F
Sbjct: 265 VKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYF 324
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
MTE + I P ++HYGC++DL GR+GL+ EAE I +P E + +I +G+LLS R+
Sbjct: 325 KMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI---WGSLLSGSRM 381
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
G++ E L +++ +S + LL+N+YA RW +V +R +M+ G++KVPGCS
Sbjct: 382 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCS 441
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+E+ G++HEF+VGD S E + IY+ML+ + + L ++
Sbjct: 442 YVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREA 479
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 177/392 (45%), Gaps = 72/392 (18%)
Query: 54 LAYNLLIKAFAKKGS---FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
+N++I+A S + ++ ++R VSPD T+PF+ + + G++
Sbjct: 24 FVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRT 83
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM--------------------- 149
H ++ GL+ D +V S+++MY G + + ++FDE
Sbjct: 84 HAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLI 143
Query: 150 ----------PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR----QGCNLMPDEGTVVS 195
P+++V+SW+ I+G+V C ++++A+D+FR M+ + P++ T+ +
Sbjct: 144 NHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMST 203
Query: 196 TLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
LSAC L LE GK +H YI++ +E ++G AL+DMY KCG L A+ +FD + +K
Sbjct: 204 VLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSK- 262
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
+D+ ++AMI + DE +F EM
Sbjct: 263 -----------------------------KDVKAYSAMICCLAMYGLTDECFQVFSEMTT 293
Query: 315 I-RLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ P+ V +L C G + +GK + E IT ++++Y + GLI
Sbjct: 294 SNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLI 353
Query: 373 EKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
++A + E D W S++ G M G I
Sbjct: 354 KEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 385
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 184/429 (42%), Gaps = 60/429 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++ AQI GL ++P L+ + S G+L A +IF S L A+N ++ A+A
Sbjct: 81 QRTHAQILLFGLDKDPFVRTSLLNM--YSSCGDLSSALRIFDESVSKDLPAWNSVVNAYA 138
Query: 65 KKGSFRKSLLLFSKLRERGV------------------------------------SPDN 88
K G + LF ++ ER V SP+
Sbjct: 139 KAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNK 198
Query: 89 FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
FT V A G LG +++G+ VH Y+ K G+E D + +++DMY G + K++FD
Sbjct: 199 FTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDA 258
Query: 149 M-PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+ KDV +++ I ++ VF M N+ P+ T V L AC +
Sbjct: 259 LGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLIN 318
Query: 208 LGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
GK + + +E TP + + ++D+Y + G + EA MP +V+ W S++SG
Sbjct: 319 KGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 378
Query: 265 YVNCGQLEKARDLFDRSPVRDIV---LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
G ++ R D + + + N Y + R+ E + EM++ +K
Sbjct: 379 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKK-- 436
Query: 322 FILVALLTGCAQLGALEQGKWIHGYI--NENRITVDAVVAT--ALIEMYAKCGLIEKALE 377
+ GC+ +E +H ++ +E++ + + A +++ + G + E
Sbjct: 437 ------VPGCSY---VEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDTKE 487
Query: 378 IFYELREKD 386
+ +L EKD
Sbjct: 488 VLLDLEEKD 496
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 322/572 (56%), Gaps = 18/572 (3%)
Query: 3 QLKQIQAQIFQIGLQQ-NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q KQ+ A I GL P ++++ ++ S Y + +SP ++ I+
Sbjct: 19 QAKQVHALILIHGLSHLEPILARQILISASNYSATVAQYVHSVLHHSKSPDSFSWACAIR 78
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ G F+++ L+ +++ G+ P F KA + G +HG V K G
Sbjct: 79 FSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIHGQVQKFGFSC 138
Query: 122 D---TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
YV +++D Y LG + +K+FDEM +++VVSWN ++G++K A VF
Sbjct: 139 GGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFD 198
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
+ Q D + S +S ++E + Q E NA++ + + G
Sbjct: 199 EIPQ-----KDVISWNSMISGYARAGDMEKASSL---FQQMPERNFASWNAMISGHVEFG 250
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ AR FD MP KN + W +M+SGY CG ++ A +LFD+ +D++L+ AMI Y Q
Sbjct: 251 DIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQ 310
Query: 299 FNRFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+R +EA+ LF M + ++PD+ L ++++ C+QLG L G WI Y+ I +D
Sbjct: 311 NSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDG 370
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ATAL+++YAKCG I+KA E+F+ LR+KD ++T++I G +NGK A++LF +M+
Sbjct: 371 HLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDA 430
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
P+ ITFIG+L+A +H GLV+EG R F +M + Y + P ++HYG ++DL GRAG L E
Sbjct: 431 QIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQE 489
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A ELI+ +P + + ++GALL ACR++ NV+ GE A ++E + + +LL+NI
Sbjct: 490 ALELIKSMPMQPH---AGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNI 546
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
YAS RW+DV +R+ KE G K+PGCS +E
Sbjct: 547 YASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 311/572 (54%), Gaps = 50/572 (8%)
Query: 36 GNLLYAEKIFGSIQSPCL---LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP 92
G A+ +F + P +N I+ A G R +LL F+++R GV PD +T+P
Sbjct: 59 GAAPLADAVFARLPEPAARDPFPWNTAIRLHAP-GRPRAALLYFARMRSCGVRPDAYTFP 117
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP-- 150
V KA G + G VH V+ GL D + N+++ Y + + +K+FDE
Sbjct: 118 AVLKACGCAPGCRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGV 177
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+D+VSWN ++G+V C + L +
Sbjct: 178 SRDLVSWNSMVAGYVGC------------------------------------GEMGLAQ 201
Query: 211 EIHRYINQELEFTPIMGNALLDMYCKCGC--LSEARELFDEMPNKNVICWTSMVSGYVNC 268
E+ + Q F+ AL+D Y K G + ARELFD+M ++++CW SM+ GY
Sbjct: 202 ELFDEMPQRDAFS---WGALIDGYGKQGGAGVDRARELFDQMTERDLVCWNSMIDGYARH 258
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G++++AR LF+ P R+++ W+ +I+G+V+ EA+ F+ M ++PD+ V +
Sbjct: 259 GRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAV 318
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+ CAQLGALEQG+W+H Y+ + ++ D VV TALI+MY KCG ++ A+ IF + E+
Sbjct: 319 SACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVV 378
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+W +I GL +G A+ LF +M + DD++ + +L+AC+H GLV EG F+ M
Sbjct: 379 TWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLAMLTACTHAGLVSEGLEIFHRM 438
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+ + I PK+EHYG L+DLLGRAG LD+A I +P E L+G+LL+ACR +
Sbjct: 439 KKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTP---ELWGSLLAACRSHSC 495
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
V++ E L + + DS + LL+NIYA W DV +R+ M + G+RK G S IE
Sbjct: 496 VELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIE 555
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++G IHEF+ G SH EIY ML ++K +
Sbjct: 556 VDGEIHEFVNGGGSHLCTDEIYLMLWNLSKMV 587
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 177/375 (47%), Gaps = 48/375 (12%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIF---GSIQSPCLLAYNLLIKAF 63
+ A+ + GL + T+N L+ F + + K+F G + S L+++N ++ +
Sbjct: 135 VHAEAVRRGLGADLFTVNALISFYCRIL--DCISGRKVFDEAGGV-SRDLVSWNSMVAGY 191
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G + LF ++ +R D F++ + G G + T E D
Sbjct: 192 VGCGEMGLAQELFDEMPQR----DAFSWGALIDGYGKQGGAGVDRARELFDQMT--ERDL 245
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
NS++D Y G++ + LF+EMP+++V+SW++ I GHV+C ++A++ F+ M +
Sbjct: 246 VCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLR- 304
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP-IMGNALLDMYCKCGCLSE 242
C + PD V +SAC L LE G+ +H Y+ ++ + ++ AL+DMY KCG +
Sbjct: 305 CGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDL 364
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F+ MP ++V+ W M+ G +GY
Sbjct: 365 AMLIFESMPERSVVTWNVMIVGLGT--------------------------HGYGL---- 394
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA--T 360
+AV LF M+ R+ D L+A+LT C G + +G I + ++ +D V
Sbjct: 395 -DAVMLFHRMEAERVAVDDLSLLAMLTACTHAGLVSEGLEIFHRMKKD-FGIDPKVEHYG 452
Query: 361 ALIEMYAKCGLIEKA 375
AL+++ + G +++A
Sbjct: 453 ALVDLLGRAGRLDQA 467
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 116/232 (50%), Gaps = 4/232 (1%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
HG + A +F + +++++++I + G +++L F + G+ PD
Sbjct: 258 HGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGA 317
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG +++G +H Y+ K + D V +++DMY G++ +F+ MP++ V
Sbjct: 318 VSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSV 377
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
V+WNV I G DAV +F RM + + D+ ++++ L+ACT + G EI
Sbjct: 378 VTWNVMIVGLGTHGYGLDAVMLFHRM-EAERVAVDDLSLLAMLTACTHAGLVSEGLEIFH 436
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNKNVI-CWTSMVS 263
+ ++ P + + AL+D+ + G L +AR + MP + W S+++
Sbjct: 437 RMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLA 488
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 205/632 (32%), Positives = 336/632 (53%), Gaps = 56/632 (8%)
Query: 20 PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC--LLAYNLLIKAFAKKGSFRKSLLLFS 77
P+ + + + + GN+ A ++F + ++YN +I AF+ +L LF
Sbjct: 60 PDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFV 119
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLG-EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL 136
+++ G PD FT+ V A+ + E +++H V K G V N++M Y
Sbjct: 120 QMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSC 179
Query: 137 GK---------ICNVKKLFDEMP---------------------------------DKDV 154
+ +KLFDE P D
Sbjct: 180 ASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIA 239
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
V+WN ISG+V +E+A D+ RRM + DE T S +SA + +G+++H
Sbjct: 240 VAWNAMISGYVHRGFYEEAFDLLRRM-HSLGIQLDEYTYTSVISAASNAGLFNIGRQVHA 298
Query: 215 YINQEL-----EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
Y+ + + F + NAL+ +Y +CG L EAR +FD+MP K+++ W +++SG VN
Sbjct: 299 YVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNAR 358
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
++E+A +F PVR ++ WT MI+G Q +E + LF +M++ L+P + +
Sbjct: 359 RIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIA 418
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C+ LG+L+ G+ +H I + V ALI MY++CGL+E A +F + D+ S
Sbjct: 419 SCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVS 478
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W ++I LA +G +A++L+ +M+ PD ITF+ +LSACSH GLV EGR +F+TM
Sbjct: 479 WNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMR 538
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
Y I P+ +HY LIDLL RAG+ EA+ + +P E P++ ALL+ C I+GN+
Sbjct: 539 VCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPG---APIWEALLAGCWIHGNM 595
Query: 510 DMGEKLA-ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
++G + A LLE + +D ++ + L+N+YA+ +W++V VR+ M+E GV+K PGCS IE
Sbjct: 596 ELGIQAADRLLELMPQQDGTYIS-LSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIE 654
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+ ++H FLV D H E+ +Y L+++ +
Sbjct: 655 VENMVHVFLVDDAVHPEVHAVYRYLEQLVHEM 686
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 217/507 (42%), Gaps = 90/507 (17%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD--------- 151
L VH +++ +G + + N ++D Y I + LFD++P
Sbjct: 9 LSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTM 68
Query: 152 ------------------------KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLM 187
+D VS+N I+ A+ +F +M++ +
Sbjct: 69 LSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKR-LGFV 127
Query: 188 PDEGTVVSTLSACTALKNLELG-KEIHRYINQELEFT-PIMGNALLDMYCKCGC------ 239
PD T S L A + + + E +++H + + + P + NAL+ Y C
Sbjct: 128 PDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNS 187
Query: 240 ---LSEARELFDEMP--NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
++ AR+LFDE P ++ WT++++GYV L AR+L + V W AMI+
Sbjct: 188 CVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMIS 247
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GYV ++EA L R M + ++ D++ ++++ + G G+ +H Y+ +
Sbjct: 248 GYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQP 307
Query: 355 DA----VVATALIEMYAKCG-------------------------------LIEKALEIF 379
V ALI +Y +CG IE+A IF
Sbjct: 308 SGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIF 367
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
E+ + +WT +I GLA NG + L+LF+QM G +P D + G +++CS G +D
Sbjct: 368 REMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLD 427
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
G++ + + ++ L LI + R GL++ A+ + +P ++ + A+
Sbjct: 428 NGQQLHSQIIQLGH-DSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVS----WNAM 482
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKD 526
++A +G+ G + L EK+ +D
Sbjct: 483 IAALAQHGH---GVQAIQLYEKMLKED 506
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 312/548 (56%), Gaps = 36/548 (6%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
+N +I F G ++L +F ++R + VS D+ T + L ++ G +H Y
Sbjct: 207 TWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYA 266
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
+K GLEFD +VCN++++MY G++ + + +F++M +D+VSWN ++ + + A+
Sbjct: 267 IKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIAL 326
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLD 232
V+ +M ++PD T+VS S L N + IH ++ + F +GNA++D
Sbjct: 327 GVYNKM-HSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIID 385
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY K G + AR++F+ +P K+VI W S+++GY G +A D+
Sbjct: 386 MYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDV--------------- 430
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
Y + AV P++ V++LT +QLGAL+QG HG + +N +
Sbjct: 431 ---YSSMRYYSGAV------------PNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFL 475
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
D V+T L++MY KCG + AL +FYE+ + + SW +II ++G KA++LF +
Sbjct: 476 YFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKE 535
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M S G KPD ITF+ +LSACSH GLVDEG+ F M E Y I+P L+HYGC++DL GRAG
Sbjct: 536 MQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAG 595
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
L++A ++ +P + V ++GALL ACRI+ NV++ ++ L K+ES++ ++ L
Sbjct: 596 HLEKAFNFVKNMPVRPD---VSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVL 652
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+NIYA WE V VR ++ G++K PG SSIE++ I F G+ +H + +EIYS
Sbjct: 653 LSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSE 712
Query: 593 LDRMAKTL 600
L + +
Sbjct: 713 LRNLTAKM 720
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 222/496 (44%), Gaps = 84/496 (16%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+V +++H +V +G ++ +++ Y LG I + + FD++ KDV +WN IS
Sbjct: 55 KVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMIS 114
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
+ + F AVD F L D T + AC NL+ G+++H + + E
Sbjct: 115 AYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFE 171
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ + + Y + G +S A LFD M +++ W +M+SG+ G++ +A ++FD
Sbjct: 172 CDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEM 231
Query: 282 PVR---------------------------------------DIVLWTAMINGYVQFNRF 302
+ D+ + A+IN Y +F
Sbjct: 232 RFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGEL 291
Query: 303 DEAVALFREMQI-------------------------------IRLKPDKFILVALLTGC 331
A +F +M++ I + PD LV+L +
Sbjct: 292 RSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVA 351
Query: 332 AQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
A+LG + IHG++ D + A+I+MYAK G I+ A ++F L KD SW
Sbjct: 352 AELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISW 411
Query: 391 TSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
S+I G + NG N+A++++S M GA P+ T++ +L+A S G + +G + +
Sbjct: 412 NSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLI 471
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+ + + + CL+D+ G+ G L +A L ++P++++ + A++S ++G
Sbjct: 472 KNF-LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSS----VSWNAIISCHGLHG-- 524
Query: 510 DMGEKLAALLEKIESK 525
G K L ++++S+
Sbjct: 525 -YGLKAVKLFKEMQSE 539
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 186/503 (36%), Positives = 297/503 (59%), Gaps = 18/503 (3%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIM-DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
++VH ++ TGL N ++ + + I +FD P D+ +N I K
Sbjct: 18 KQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTII----K 73
Query: 167 CMRFE-----DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQEL 220
+ F D+ FR + + L+P++ + C + + G+++ + I L
Sbjct: 74 VLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGL 133
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
E + NAL+ MY + +AR++FD PN+++ W M+SGY G++++AR LFD
Sbjct: 134 ENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDE 193
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P +D+V WT MI+G +Q F EA+ +F M + P+++ L + L CA L AL+QG
Sbjct: 194 MPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQG 253
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY---ELREKDAASWTSIICGL 397
+W+H YI +N I ++ + LI+MYAKCG +E A ++F L+ K W ++I G
Sbjct: 254 RWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRK-VWPWNAMIGGF 312
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
A++GK +A+E+F QM P+ +TF+ +L+ACSHG V+EGR +F +M Y+++P+
Sbjct: 313 AVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPE 372
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
LEHYGCL+DLLGRAG L EAEE+I + + V ++GALLSAC+I+ + +MGE++
Sbjct: 373 LEHYGCLVDLLGRAGRLKEAEEIISSMHLTPD---VAIWGALLSACKIHKDAEMGERVGK 429
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
++++++ H LLANIY+ W + +R+K+ E G +K PGCSSIE+NG+ H+FL
Sbjct: 430 IVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFL 489
Query: 578 VGDPSHSEMKEIYSMLDRMAKTL 600
VGD SH + K++Y LD M L
Sbjct: 490 VGDRSHPQTKQLYLFLDEMITKL 512
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 206/444 (46%), Gaps = 73/444 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK- 61
Q+KQ+ A++ GL +P NKL+ + + YA +F P L YN +IK
Sbjct: 16 QIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDLFLYNTIIKV 74
Query: 62 -AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
AF+ S S +RE + P+ +++ F FK G V +GE+V + +K GLE
Sbjct: 75 LAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLE 134
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ +V N+++ MY L + + +K+FD P++D+ SWN+ +SG+ + + ++A +F M
Sbjct: 135 NNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEM 194
Query: 181 RQ-----------GC-------------------NLMPDEGTVVSTLSACTALKNLELGK 210
+ GC + P+E T+ S+L+AC L L+ G+
Sbjct: 195 PEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGR 254
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVN 267
+H YI + ++ + L+DMY KCG L A +LF+ P + V W +M+ G+
Sbjct: 255 WMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAV 314
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G+ + EA+ +F +M+I ++ P+K VAL
Sbjct: 315 HGKSK-------------------------------EAIEVFEQMKIEKVSPNKVTFVAL 343
Query: 328 LTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EK 385
L C+ +E+G+ + + R+ + L+++ + G +++A EI +
Sbjct: 344 LNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTP 403
Query: 386 DAASWTSIICGLAMNGKINKALEL 409
D A W +++ KI+K E+
Sbjct: 404 DVAIWGALLSAC----KIHKDAEM 423
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 204/629 (32%), Positives = 339/629 (53%), Gaps = 75/629 (11%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q KQ+ AQ + Q+ + +V + + L A +F +++SP +LA+ +I+
Sbjct: 22 SQAKQLHAQFIR---TQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 78
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
F + F K+L F ++R G PD+ +P V K+ + +++ GE VHG++V+ G++
Sbjct: 79 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 122 DTYVCNSIMDMYGVL-----------------------------GKIC-------NVKKL 145
D Y N++M+MY L + C +V+++
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
F+ MP KDVVS+N I+G+ + +EDA+ + R M +L PD T+ S L + +
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT-TDLKPDSFTLSSVLPIFSEYVD 257
Query: 206 LELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+ GKEIH Y I + ++ +G++L+DMY K
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA-------------------------- 291
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
++E + +F R RD + W +++ GYVQ R++EA+ LFR+M ++KP
Sbjct: 292 -----RIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAF 346
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+++ CA L L GK +HGY+ + +A+AL++MY+KCG I+ A +IF +
Sbjct: 347 SSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
D SWT+II G A++G ++A+ LF +M G KP+ + F+ VL+ACSH GLVDE +
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
FN+MT+VY + +LEHY + DLLGRAG L+EA I K+ E ++ LLS+C
Sbjct: 467 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG---SVWSTLLSSCS 523
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGC 564
++ N+++ EK+A + ++S++ + L+ N+YAS RW+++ +R +M++ G+RK P C
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583
Query: 565 SSIEINGIIHEFLVGDPSHSEMKEIYSML 593
S IE+ H F+ GD SH M +I L
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/458 (39%), Positives = 274/458 (59%), Gaps = 4/458 (0%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++ D+ + + N I + K + + + ++ Q ++M + + L A
Sbjct: 64 QILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ 123
Query: 204 KNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
E G +H I E+ P + + L+ MY + CLS +F+ + +++C T+MV
Sbjct: 124 SACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMV 183
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
S CG + AR+LFD P RD V W AMI GY Q + EA+ LF+ MQ+ +K ++
Sbjct: 184 SACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEV 243
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+++++T C LGAL+QGKW H YI +N+I + + TAL++MY KCG +++AL++F+E+
Sbjct: 244 SMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEM 303
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
EK+ +W++ I GLAMNG K LELFS M G P++ITFI VL CS G VDEGR
Sbjct: 304 NEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGR 363
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
F++M + I+P+LEHYGC++DL GRAG L+EA I +P + + +GALL+A
Sbjct: 364 SHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPH---AGAWGALLNA 420
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
CR+Y N+++GE + L ++E K+ + L+NIYA W+ V+NVRQ MK G+ K+P
Sbjct: 421 CRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLP 480
Query: 563 GCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
GCS +E+NG +HEF GD SH I +M ++K L
Sbjct: 481 GCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRL 518
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 206/435 (47%), Gaps = 69/435 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +LKQI Q+ GL N E L + + + NLLY+ +I P L A N +I
Sbjct: 22 LKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPTLFALNSMI 81
Query: 61 KAFAKKGSFRKSLLLFSKLRERG--VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+A++K + KS ++K+ + +SPDN+T+ F+ + + G VHG ++K G
Sbjct: 82 RAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCA-QSACEAGPAVHGALIKHG 140
Query: 119 LEFDTYVCNSIMDMYGVL-------------------------------GKICNVKKLFD 147
E+D +V + ++ MY + G I + LFD
Sbjct: 141 FEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFD 200
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
MP +D VSWN I+G+ + + +A+++F+ M+ + +E +++S ++ACT L L+
Sbjct: 201 SMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMD-GVKVNEVSMISVVTACTHLGALD 259
Query: 208 LGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
GK H YI + +++ T +G AL+DMY KCG + A ++F EM KNV W++ + G
Sbjct: 260 QGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLA 319
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
+NGY Q + + LF M+ + P++ ++
Sbjct: 320 --------------------------MNGYGQ-----KCLELFSFMKHEGIAPNEITFIS 348
Query: 327 LLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
+L GC+ +G +++G+ ++ I ++++Y + G +E+AL + K
Sbjct: 349 VLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLK 408
Query: 386 -DAASWTSIICGLAM 399
A +W +++ M
Sbjct: 409 PHAGAWGALLNACRM 423
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 202/614 (32%), Positives = 336/614 (54%), Gaps = 40/614 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ A + + + + +N L+ + G+++ A +F + + +++N +I +
Sbjct: 155 REVHAHVVRFDFDMDVDVVNALITM--YVKCGDVVSARMLFDKMPTRDRISWNAMISGYF 212
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ + L LF ++RE + PD T V A LG+ + G ++H YVV+T + +
Sbjct: 213 ENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNIS 272
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NS++ MY +G + +F M +DVVSW ISG V + + A++ ++ M +
Sbjct: 273 VYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTM-EIT 331
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE-FTPIMGNALLDMYCKCGCLSEA 243
MPDE T+ S LSAC +L L++G ++H + ++ N+L+DMY KC
Sbjct: 332 GTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCK----- 386
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++EKA ++F + P +D++ WT++ING NR
Sbjct: 387 --------------------------RIEKALEIFHQIPDKDVISWTSVINGLRINNRCF 420
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ FR+M I++ KP+ L++ L+ CA++GAL GK IH + + + D + A++
Sbjct: 421 EALIFFRKM-ILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAIL 479
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
++Y +CG + AL F L EKD +W ++ G A GK +ELF +M+ PDD+
Sbjct: 480 DLYVRCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDV 538
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFI +L ACS G+V EG +F M Y I P L+HY C++DLLGRAG L+EA E I +
Sbjct: 539 TFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIER 598
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + + I +GALL+ACRI+ +V +GE A + K +++ ++ LL N+YA + +W
Sbjct: 599 MPIKPDPAI---WGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKW 655
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
++V VR+ MKE G+ PGCS +E+ G +H FL GD H +M+EI +L+ + + S
Sbjct: 656 DEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTS 715
Query: 604 KQNAMEGDNLVAIN 617
N E ++ I
Sbjct: 716 GFNGQECSSMDGIQ 729
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 224/408 (54%), Gaps = 34/408 (8%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +FG + L ++N+L+ + K G F ++L L+ ++ G+ PD +T+P V
Sbjct: 83 GDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVL 142
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
++ ++ +G +VH +VV+ + D V N+++ MY G + + + LFD+MP +D +
Sbjct: 143 RSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRI 202
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN ISG+ + + +++F RMR+ ++ PD T+ S +SAC L + LG ++H Y
Sbjct: 203 SWNAMISGYFENDECLEGLELFFRMRE-LSIDPDLMTMTSVISACELLGDERLGTQLHSY 261
Query: 216 INQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + I + N+L+ MY G EA +F M ++V+ WT+++SG V+
Sbjct: 262 VVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVD------- 314
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+ P D+A+ ++ M+I PD+ + ++L+ CA L
Sbjct: 315 ----NLLP--------------------DKALETYKTMEITGTMPDEVTIASVLSACASL 350
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
G L+ G +H + VVA +LI+MY+KC IEKALEIF+++ +KD SWTS+I
Sbjct: 351 GQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVI 410
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
GL +N + +AL F +MI +KP+ +T I LSAC+ G + G+
Sbjct: 411 NGLRINNRCFEALIFFRKMIL-KSKPNSVTLISALSACARVGALMCGK 457
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 135/301 (44%), Gaps = 48/301 (15%)
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
+++S +V G + A ++F R RD+ W ++ GY + FDEA+ L+ + ++P
Sbjct: 74 ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D + ++L CA L +G+ +H ++ +D V ALI MY KCG + A +F
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS------ 433
++ +D SW ++I G N + + LELF +M PD +T V+SAC
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDER 253
Query: 434 -----HGGLV----DEGRRFFNTMTEVYQIQPKLEHY----------------------- 461
H +V D +N++ ++Y + H+
Sbjct: 254 LGTQLHSYVVRTAYDGNISVYNSLIQMYL---SVGHWKEAESVFSGMECRDVVSWTTIIS 310
Query: 462 GCLIDLLGRAGLLD-EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
GC+ +LL L + E+ +P+E ++LSAC G +DMG KL L E
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVT------IASVLSACASLGQLDMGMKLHELAE 364
Query: 521 K 521
+
Sbjct: 365 R 365
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 134/309 (43%), Gaps = 38/309 (12%)
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV-VAT 360
++A+ MQ +++ ++ VAL+ C +G+++ + + +T+ +V +
Sbjct: 14 LEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGN 73
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL+ M+ + G + A +F + E+D SW ++ G G ++AL L+ +++ G +P
Sbjct: 74 ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D TF VL +C+ + GR + + ++ LI + + G + A L
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVR-FDFDMDVDVVNALITMYVKCGDVVSARML 192
Query: 481 IRKIPN--------------ENNEIIVPL-----------------YGALLSACRIYGNV 509
K+P EN+E + L +++SAC + G+
Sbjct: 193 FDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDE 252
Query: 510 DMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+G +L + + + + S + L +Y S W++ +V M+ R V ++I
Sbjct: 253 RLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGME---CRDVVSWTTI- 308
Query: 569 INGIIHEFL 577
I+G + L
Sbjct: 309 ISGCVDNLL 317
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 187/518 (36%), Positives = 308/518 (59%), Gaps = 19/518 (3%)
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDM---YGVLGKICNVKKLFDE 148
PF F+ + ++++ H +++ GL ++ +++ + KLFD
Sbjct: 26 PFHFEKCQSMSQLRQ---YHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDS 82
Query: 149 MPDKDVVSWNVSISG--HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
+P D +N I G H + + + ++ M Q +++P+ T S L AC + +
Sbjct: 83 IPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQN-SVLPNNFTFPSLLIAC---RKI 138
Query: 207 ELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
+ G +IH ++ + + N+L+ MY L EAR +F +P+ + + WTS++SGY
Sbjct: 139 QHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGY 198
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP-DKFIL 324
G +++A +F P ++ W AM+ YVQ NRF EA ALF M+ DKF+
Sbjct: 199 SKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVA 258
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+L+ C LGAL+QGKWIH YI N I +D+ + TA+++MY KCG +EKAL++F+ L
Sbjct: 259 TTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPL 318
Query: 385 --KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+ +SW +I GLAM+G A++LF +M PDDITF+ +L+AC+H GLV+EGR
Sbjct: 319 PCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGR 378
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
+F+ M VY I+P++EH+GC++DLLGRAG++ EA +LI ++P + V + G LL A
Sbjct: 379 NYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPD---VTVLGTLLGA 435
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
C+ + N+++GE++ + ++E +S + LLAN+YA+A +WED VR+ M + GV+K P
Sbjct: 436 CKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAP 495
Query: 563 GCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
G S IE+ G +HEF+ G+ +H + KE+++ + M + L
Sbjct: 496 GFSMIELQGTVHEFIAGERNHPQAKELHAKVYEMLEHL 533
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 189/418 (45%), Gaps = 68/418 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGN-LLYAEKIFGSIQSPCLLAYNLL 59
M+QL+Q +QI ++GL + + L+ FC S + L YA K+F SI P YN +
Sbjct: 35 MSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTI 94
Query: 60 IKAFAKKGSFRKS--LLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
IK F + LLL+S + + V P+NFT+P + A +++ G ++H ++ K
Sbjct: 95 IKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIAC---RKIQHGMQIHAHLFKF 151
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG-------------- 163
G + NS++ MY + +++F +P D VSW ISG
Sbjct: 152 GFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIF 211
Query: 164 -----------------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
+V+ RF +A +F RM+ N + D+ + LSACT L L
Sbjct: 212 QLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGAL 271
Query: 207 ELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
+ GK IH YI + +E + A++DMYCKCGCL +A ++F +P
Sbjct: 272 DQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLP-------------- 317
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
P R I W MI G + A+ LF+EM+ R+ PD +
Sbjct: 318 ---------------LPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFL 362
Query: 326 ALLTGCAQLGALEQGKWIHGY-INENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
LLT CA G +E+G+ Y I I ++++ + G++ +A ++ E+
Sbjct: 363 NLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEM 420
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 41/283 (14%)
Query: 6 QIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
QI A +F+ G + LN L+ ++ T + L A ++F +I P +++ LI ++
Sbjct: 143 QIHAHLFKFGFGAHSVCLNSLIHMYVTFQA---LEEARRVFHTIPHPDSVSWTSLISGYS 199
Query: 65 KKG-------------------------------SFRKSLLLFSKLR-ERGVSPDNFTYP 92
K G F ++ LF +++ E D F
Sbjct: 200 KWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVAT 259
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE--MP 150
+ A LG + +G+ +H Y+ + G+E D+ + +I+DMY G + ++F +P
Sbjct: 260 TMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLP 319
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+ + SWN I G E A+ +F+ M + + PD+ T ++ L+AC +E G+
Sbjct: 320 CRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQ-RVAPDDITFLNLLTACAHSGLVEEGR 378
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
Y+ + P M + ++D+ + G + EAR+L DEMP
Sbjct: 379 NYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMP 421
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 205/601 (34%), Positives = 328/601 (54%), Gaps = 48/601 (7%)
Query: 6 QIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ + +F+ G+ + +L L V C G++ A IF S ++ +NL++ A
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKC-----GDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
F + KS LF +++ G+ P+ FTYP + + E+ GE++H VKTG E D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
YV ++DMY G + +++ + + +KDVVSW I+G+V+ +DA+ F+ M Q
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM-Q 438
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLS 241
C + PD + S +S C + + G +IH I + + NAL+++Y +CG +
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIR 498
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
EA F+EM K+ I +VSG+ G E
Sbjct: 499 EAFSSFEEMELKDGITGNGLVSGFAQSGLHE----------------------------- 529
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
EA+ +F M +K + F V+ L+ A L ++QGK IH + + + + V A
Sbjct: 530 --EALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI +Y KCG E A F E+ E++ SW +II + +G+ +AL+LF QM G KP+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
D+TFIGVL+ACSH GLV+EG +F +M++ Y I+P+ +HY C+ID+ GRAG LD A++ I
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
++P + ++ + LLSAC+++ N+++GE A L ++E DS+ + LL+N YA
Sbjct: 708 EEMPIAADAMV---WRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTE 764
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML----DRMA 597
+W + VR+ M++ GVRK PG S IE+ ++H F VGD H ++IY+ L DR+A
Sbjct: 765 KWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVA 824
Query: 598 K 598
K
Sbjct: 825 K 825
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 210/456 (46%), Gaps = 52/456 (11%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ +G +L A ++F + + +++ ++ +A+ G ++L L+ ++ GV P +
Sbjct: 87 YSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVL 146
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V + +G +H K G + +V N+++ +Y G +++F +MP
Sbjct: 147 SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH 206
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+D V++N ISGH +C E A+++F M Q L PD T+ S L+AC +L +L+ G +
Sbjct: 207 RDTVTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 212 IHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H Y+ + + IM +LLD+Y V CG
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLY-------------------------------VKCGD 294
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+E A +F+ S ++VLW M+ + Q N ++ LF +MQ ++P++F +L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C ++ G+ IH + D V+ LI+MY+K G +EKA + L+EKD SW
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
TS+I G + AL F +M G PD+I +S C+ N M +
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG----------INAMRQ 464
Query: 451 VYQIQPKLEHYG---------CLIDLLGRAGLLDEA 477
QI ++ G L++L R G + EA
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 179/380 (47%), Gaps = 32/380 (8%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H V GL V N ++D+Y G + +++F+E+ +D VSW +SG+ +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN 228
E+A+ ++R+M + ++P + S LS+CT + G+ IH
Sbjct: 123 LGEEALGLYRQMHRA-GVVPTPYVLSSVLSSCTKAELFAQGRLIH-------------AQ 168
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+C + ++++ Y+ CG A +F P RD V
Sbjct: 169 GYKHGFCS-----------------EIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVT 211
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
+ +I+G+ Q + A+ +F EMQ L PD + +LL CA LG L++G +H Y+
Sbjct: 212 FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF 271
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ I+ D ++ +L+++Y KCG +E AL IF + W ++ + K+ E
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF QM + G +P+ T+ +L C+ +D G + ++++ + + G LID+
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMY 390
Query: 469 GRAGLLDEAEELIRKIPNEN 488
+ G L++A ++ + ++
Sbjct: 391 SKYGWLEKARRVLEMLKEKD 410
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 40/326 (12%)
Query: 179 RMRQGCNLMPDEGTVVSTLSACTA-LKNLELGKEIH-RYINQELEFTPIMGNALLDMYCK 236
+ RQ L P + L AC + ++ EIH + + + L I+GN L+D+Y K
Sbjct: 32 KARQHGGLGPLD--FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSK 89
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G + AR +F+E+ ++ + W +M+SGY G E
Sbjct: 90 NGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE------------------------ 125
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
EA+ L+R+M + P ++L ++L+ C + QG+ IH ++ +
Sbjct: 126 -------EALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V A+I +Y +CG A +F ++ +D ++ ++I G A G ALE+F +M
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD +T +L+AC+ G + +G + + + + I G L+DL + G ++
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVET 297
Query: 477 AEELIRKIPNENNEIIVPLYGALLSA 502
A L+ I N ++ V L+ +L A
Sbjct: 298 A--LV--IFNSSDRTNVVLWNLMLVA 319
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 176/446 (39%), Positives = 275/446 (61%), Gaps = 9/446 (2%)
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT---ALKNLELGK 210
+VSW SI+ + K A F +MR+ + P+ T ++ LSAC + ++ G
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAA-IEPNHITFITLLSACAHYPSRSSISFGT 114
Query: 211 EIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
IH ++ + L+ +M G AL+DMY KCG + AR FD+M +N++ W +M+ GY+
Sbjct: 115 AIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRN 174
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G+ E A +FD PV++ + WTA+I G+V+ + +EA+ FREMQ+ + PD ++A++
Sbjct: 175 GKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVI 234
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
CA LG L G W+H + + V+ +LI+MY++CG I+ A ++F + ++
Sbjct: 235 AACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLV 294
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
SW SII G A+NG ++AL F+ M G KPD +++ G L ACSH GL+ EG R F M
Sbjct: 295 SWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHM 354
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
V +I P++EHYGCL+DL RAG L+EA +++ +P + NE+I+ G+LL+ACR GN
Sbjct: 355 KRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVIL---GSLLAACRTQGN 411
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+ + E + L +++S S + LL+NIYA+ +W+ VR++MKE G++K PG SSIE
Sbjct: 412 IGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIE 471
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLD 594
I+ IH+F+ GD SH E IY+ L+
Sbjct: 472 IDSSIHKFVSGDKSHEEKDHIYAALE 497
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 180/405 (44%), Gaps = 71/405 (17%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL---GEVKKGEK 109
++++ I + K G K+ F ++RE + P++ T+ + A + G
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTA 115
Query: 110 VHGYVVKTGLEF-DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+H +V K GL+ D V +++DMY G++ + + FD+M +++VSWN I G+++
Sbjct: 116 IHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNG 175
Query: 169 RFEDAVDVFR------------------------------RMRQGCNLMPDEGTVVSTLS 198
+FEDA+ VF R Q + PD TV++ ++
Sbjct: 176 KFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIA 235
Query: 199 ACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC L L LG +HR + Q+ + N+L+DMY +CGC+ AR++FD MP + ++
Sbjct: 236 ACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVS 295
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W S++ G+ +NG DEA++ F MQ
Sbjct: 296 WNSIIVGFA--------------------------VNGLA-----DEALSYFNSMQEEGF 324
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKAL 376
KPD L C+ G + +G I ++ R + + L+++Y++ G +E+AL
Sbjct: 325 KPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEAL 384
Query: 377 EIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMI---SGG 417
+ + K + S++ G I A + + +I SGG
Sbjct: 385 NVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYLIELDSGG 429
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 13/288 (4%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G A ++F + +++ LI F KK ++L F +++ GV+PD T V
Sbjct: 174 NGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAV 233
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + G VH V+ + V NS++DMY G I +++FD MP + +
Sbjct: 234 IAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTL 293
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSWN I G ++A+ F M++ PD + L AC+ + G I
Sbjct: 294 VSWNSIIVGFAVNGLADEALSYFNSMQEE-GFKPDGVSYTGALMACSHAGLIGEGLRIFE 352
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQL 271
++ + P + + L+D+Y + G L EA + MP K N + S+++ G +
Sbjct: 353 HMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNI 412
Query: 272 EKARDL------FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
A ++ D + VL + N Y ++D A + R M+
Sbjct: 413 GLAENVMNYLIELDSGGDSNYVLLS---NIYAAVGKWDGANKVRRRMK 457
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 317/563 (56%), Gaps = 12/563 (2%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F +Q L+ + ++I +A+ G +SL+LF K+RE GV PD V A
Sbjct: 212 ARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK 271
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
LG + K + Y+ + + D + +++DMY G + + +++FD M +K+V+SW+
Sbjct: 272 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAM 331
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QE 219
I+ + + A+D+FR M ++PD+ T+ S L AC +NL +++H +
Sbjct: 332 IAAYGYHGQGRKALDLFRMMLSS-GMLPDKITLASLLYACINCRNLTQVRQVHAQASVHG 390
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ I+ N L+ Y L +A LFD M ++ + W+ MV G+ G F
Sbjct: 391 MLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF- 449
Query: 280 RSPVRDIVLWTAMINGYVQ--FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
R+++ A + Y +E++ LF +M+ + PDK +V ++ CA+LGA+
Sbjct: 450 ----RELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 505
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
+ + I YI + +D ++ TA+I+M+AKCG +E A EIF + EK+ SW+++I
Sbjct: 506 HKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAY 565
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+G+ KAL+LF M+ G P+ IT + +L ACSH GLV+EG RFF+ M E Y ++
Sbjct: 566 GYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRAD 625
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
++HY C++DLLGRAG LDEA +LI + E +E L+GA L ACR + +V + EK A
Sbjct: 626 VKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE---GLWGAFLGACRTHKDVVLAEKAAT 682
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
L +++ ++ + LL+NIYA+A RWEDV R M + ++K+PG + IE++ H+F
Sbjct: 683 SLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFS 742
Query: 578 VGDPSHSEMKEIYSMLDRMAKTL 600
VGD +H KEIY ML + L
Sbjct: 743 VGDTTHPRSKEIYEMLKSLGNKL 765
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 251/543 (46%), Gaps = 92/543 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+TQ++Q+ AQ G+ +N NKL+ F ++ + L A +F + +++++++
Sbjct: 94 LTQVRQVHAQASVHGMLENIVVANKLIYFYSY--YRALDDAYGLFDGMCVRDSVSWSVMV 151
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
FAK G + F +L G PDN+T PFV +A L ++
Sbjct: 152 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM-------------- 197
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+++DMY +I + + LFD+M ++D+V+W V I G+ +C + +++ +F +M
Sbjct: 198 -------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 250
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGC 239
R+ ++PD+ +V+ + AC L + + I YI ++ + I+G A++DMY KCGC
Sbjct: 251 REE-GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 309
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ ARE+FD M KNVI W++M++ Y GQ KA D
Sbjct: 310 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD----------------------- 346
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
LFR M + PDK L +LL C L Q + +H + + + + +VA
Sbjct: 347 --------LFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVA 398
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA-----MN-------------- 400
L+ Y+ ++ A +F + +D+ SW+ ++ G A MN
Sbjct: 399 NKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 458
Query: 401 ---------GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
G N++L LF +M G PD + + V+ AC+ G + + R + +
Sbjct: 459 PDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKART-IDDYIQR 517
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
+ Q + +ID+ + G ++ A E+ ++ +N V + A+++A YG
Sbjct: 518 KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN----VISWSAMIAA---YGYHGQ 570
Query: 512 GEK 514
G K
Sbjct: 571 GRK 573
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 124/295 (42%), Gaps = 33/295 (11%)
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P+ + ++ T + + +E + F +Q RL P KF + AL+ C L + Q
Sbjct: 46 PIVESIIETQFRQTSLNLHNREEESSKFHFLQ--RLNP-KFYISALVN-CRNLTQVRQ-- 99
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H + + + + VVA LI Y+ ++ A +F + +D+ SW+ ++ G A G
Sbjct: 100 -VHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 158
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACS-----HGGLVD---------EGRRFFNT 447
F ++I GA+PD+ T V+ AC LVD + R F+
Sbjct: 159 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDK 218
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS---ACR 504
M E L + +I G +E+ L K+ E +VP A+++ AC
Sbjct: 219 MQE-----RDLVTWTVMIGGYAECGKANESLVLFEKMREEG---VVPDKVAMVTVVFACA 270
Query: 505 IYGNVDMGEKLAALLEKIESK-DSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
G + + +++ + + D T + ++YA E + +M+E V
Sbjct: 271 KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 325
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H G + A +IF ++ +++++ +I A+ G RK+L LF + G+ P+ T
Sbjct: 534 HAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITL 593
Query: 92 PFVFKAVGWLGEVKKGEKVHG-----YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
+ A G V++G + Y V+ ++ Y C ++D+ G G++ KL
Sbjct: 594 VSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKH--YTC--VVDLLGRAGRLDEALKLI 649
Query: 147 DEMP-DKDVVSWNVSISGHVKCMRFEDAV 174
+ M +KD W + C +D V
Sbjct: 650 ESMTVEKDEGLWGAFLGA---CRTHKDVV 675
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/500 (37%), Positives = 286/500 (57%), Gaps = 18/500 (3%)
Query: 106 KGEKVHGYVVKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
+H ++K GL ++ +++ Y LG + ++LFDEMP++ +V H
Sbjct: 27 SASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAH 86
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC------TALKNLELGKEIHR-YIN 217
V + A+ VF M + PD V L AC TA +N GK IH +
Sbjct: 87 VASGQAAQAIAVFGDMVAD-GVFPDNVAVAVALGACHGAGSWTARRNP--GKMIHALVVT 143
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ + L+ +Y + G L +R +FD+MP+++ I W +M+ Y G+++ A ++
Sbjct: 144 SGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEM 203
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM---QIIRLKPDKFILVALLTGCAQL 334
F P RD+V W ++ GY R EA+ LFR+M + P+ + +L CA
Sbjct: 204 FLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGA 263
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSI 393
G LE G W+H YI NR+ D + LI+MY KCG I+ AL++F + R+KD SWT++
Sbjct: 264 GCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTV 323
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
ICGLAM+G+ AL +F M G PDD+T +GVL+AC+HGGLVDEG +F +M ++
Sbjct: 324 ICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFR 383
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I PK+EHYGC+IDLLGR G L EA +IR +P + N +I +GA LSAC+++GN+++G+
Sbjct: 384 ITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVI---WGAFLSACKVHGNMELGK 440
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
A L +++ D +L+++YA A W + R++M M V+K PGCSSIE+ G +
Sbjct: 441 IAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEV 500
Query: 574 HEFLVGDPSHSEMKEIYSML 593
HEF+ G H + EI S+L
Sbjct: 501 HEFVAGGSQHPQYAEICSVL 520
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 171/408 (41%), Gaps = 70/408 (17%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ +A ++F + L+ + +A G +++ +F + GV PDN
Sbjct: 59 GSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVAL 118
Query: 96 KAV----GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A W G+ +H VV +G+ D +V ++ +YG G++ +++FD+MP
Sbjct: 119 GACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPS 178
Query: 152 K-------------------------------DVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ DVVSWN ++G+ R +A+ +FR+M
Sbjct: 179 RSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQM 238
Query: 181 --RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC 237
C + P+ T+ + L AC LE G +H YI + + + L+DMYCKC
Sbjct: 239 VSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKC 298
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G + A ++F++ P K +DLF WT +I G
Sbjct: 299 GSIDNALQVFEKAPRK---------------------KDLFS---------WTTVICGLA 328
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDA 356
R +A+ +F MQ + PD LV +L CA G +++G + + + RIT
Sbjct: 329 MHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKI 388
Query: 357 VVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
+I++ + G +++A + + + + W + + ++G +
Sbjct: 389 EHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNM 436
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER---GVSPDNFTY 91
HG + A ++F ++ ++++N ++ + G R++L LF ++ V P+ T
Sbjct: 194 HGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTM 253
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP- 150
+ A G ++ G VH Y+ + + D Y+ ++DMY G I N ++F++ P
Sbjct: 254 STILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPR 313
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
KD+ SW I G R DA+ +F M Q + PD+ T+V L+AC ++ G
Sbjct: 314 KKDLFSWTTVICGLAMHGRTTDALRMF-DMMQDNGICPDDVTLVGVLNACAHGGLVDEGL 372
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVN 267
+ + TP + + ++D+ + G L EA + MP + N + W + +S
Sbjct: 373 GYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKV 432
Query: 268 CGQLE 272
G +E
Sbjct: 433 HGNME 437
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/594 (35%), Positives = 335/594 (56%), Gaps = 29/594 (4%)
Query: 2 TQLK---QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIF----------GS 47
TQ++ QI A++ + G QN ++++ L +A +F G
Sbjct: 1 TQIRRCEQIHARLIKTGFIQNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFAHGE 60
Query: 48 IQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG 107
++ P L +N +IK+ + +++L+ F + E GVS D F+ V KA LG V++G
Sbjct: 61 VEDPFL--WNAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEG 118
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
++HG++ KTG+ D ++ N ++ +Y G + +++FD MP +D VS+N I G+VKC
Sbjct: 119 MQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKC 178
Query: 168 MRFEDAVDVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPI 225
A ++F +LMP E ++S S + G I + E+ E I
Sbjct: 179 GLIGSARELF-------DLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLI 231
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
N+L+D Y K G + +A++LF MP ++V+ W +M+ GY G + KA+ LFD+ P RD
Sbjct: 232 SWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRD 291
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+V + +M+ GYVQ EA+ +F M+ L PD+ LV +L+ AQLG L + ++
Sbjct: 292 VVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMN 351
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
YI E + + ALI+M++KCG I++A+ +F ++ K W ++I GLA++G
Sbjct: 352 KYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKSIDHWNAMIGGLAIHGHGE 411
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
A ++ Q+ KPDDITFIGVL+ACSH GLV EG F M ++I+P+L+HYGC+
Sbjct: 412 LAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGCI 471
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+D+L R+G ++ A+ LI +P E N++I + L ACR ++GE +A L
Sbjct: 472 VDILSRSGSIELAKHLIEDMPMEPNDVI---WRTFLIACRNRKEFEIGELVAKHLILQAG 528
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ S + LL+N+YAS W+DV VR MK+ + K+PGCS IE++G +HEF V
Sbjct: 529 YNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFFV 582
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/628 (33%), Positives = 330/628 (52%), Gaps = 67/628 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLY----------------- 40
++Q +QI + IF++GL N N L+ C + LL+
Sbjct: 69 ISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSG 128
Query: 41 ---------AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
A K+F + + ++Y +I F + G FR++L +F +R GV P++ T
Sbjct: 129 YVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTL 188
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP- 150
V A LGEV VHG VVK + V ++M Y + + ++LFDEMP
Sbjct: 189 VNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPE 248
Query: 151 ------------------------------DKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
DKDV+SW I G+++ R +A++++R M
Sbjct: 249 RNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAM 308
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGC 239
Q + P+E +V+ +SAC + G ++H + + + + ++ Y CG
Sbjct: 309 LQTGH-GPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGM 367
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A F+ ++ W ++ +G++ G ++ A FD+ VRD+ W+ MI+GY Q
Sbjct: 368 MDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQS 427
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
A+ LF +M +KP++ +V++ + A LG L++GK H Y+ I + +
Sbjct: 428 EHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLR 487
Query: 360 TALIEMYAKCGLIEKALEIFYELREK--DAASWTSIICGLAMNGKINKALELFSQMISGG 417
ALI+MYAKCG I AL+ F ++R++ + W +IICGLA +G + LE+FS M
Sbjct: 488 AALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFH 547
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
KP+ ITFIGVLSAC H GLV+ G+R F TM Y ++P ++HYGC+ID+LGRAGLL+EA
Sbjct: 548 IKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEA 607
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
EE+IR +P E + +I +G LL+ACR +GNV++GE+ A L ++ LL+NIY
Sbjct: 608 EEMIRSMPMEADIVI---WGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIY 664
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCS 565
A+A +WE+V+ VR M+ + + PG S
Sbjct: 665 ANAGKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 237/481 (49%), Gaps = 69/481 (14%)
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI--------------- 139
K+ L + +G ++H + K GL F+T++ NS+++MY G I
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 140 --CNV--------------KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
CN+ +KLFD MP+K VS+ I G V+ F +A++VF+ MR
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRS- 178
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF-TPIMGNALLDMYCKCGCLSE 242
C ++P++ T+V+ +SAC+ L + + +H + + I+ L+ YC C + E
Sbjct: 179 CGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVRE 238
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
AR LFDEMP +N++ W M++GY G +++AR+LFD +D++ W MI+GY+Q R
Sbjct: 239 ARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRL 298
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ ++R M P++ ++V L++ C + A+ G +HG + + + T +
Sbjct: 299 REALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTI 358
Query: 363 IEMYAKC-------------------------------GLIEKALEIFYELREKDAASWT 391
I YA C G+++ AL+ F ++ +D SW+
Sbjct: 359 IYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWS 418
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM-TE 450
++I G A + ALELF +M++GG KP+++T + V SA + G + EG+ M +E
Sbjct: 419 TMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSE 478
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
L LID+ + G ++ A + +I +E + V + A++ +G+
Sbjct: 479 SIPFNDNLR--AALIDMYAKCGSINSALQFFNQIRDEVSS--VSPWNAIICGLASHGHAS 534
Query: 511 M 511
M
Sbjct: 535 M 535
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 158/309 (51%), Gaps = 32/309 (10%)
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLD 232
+ +F R N E +VS L +C++L + G++IH I + L F + N+L++
Sbjct: 37 IHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLIN 96
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY KCG + A+ LFD + + MVSGYV GQ++ AR LFD P + V +T M
Sbjct: 97 MYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTM 156
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I G+VQ F EA+ +F++M+ + P+ LV +++ C+ LG + + +HG + + +
Sbjct: 157 IMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFV 216
Query: 353 TVDAVVATALIEM-------------------------------YAKCGLIEKALEIFYE 381
+V+T L+ YAK GL+++A E+F
Sbjct: 217 VGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDG 276
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ +KD SW ++I G G++ +ALE++ M+ G P+++ + ++SAC G + +G
Sbjct: 277 ICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDG 336
Query: 442 RRFFNTMTE 450
+ T+ +
Sbjct: 337 WQLHGTVVK 345
>gi|449443185|ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 325/570 (57%), Gaps = 28/570 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LKQI + + + +N ++L+ FC + G++ YA +F I + +N +I
Sbjct: 18 MKELKQIHSLMITTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQINQRTVYIWNSMI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K + G +L ++ +++ +G SPD+FT+PFV K + + G+ VH +VKTG E
Sbjct: 78 KGYCNGGDKFGALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLVYGQSVHNRIVKTGFE 137
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y + +++MY G + + K+F+ +P +VV+W I+G V + ++A+ +F+ M
Sbjct: 138 LDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNNDQPKEALRLFKDM 197
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ P+E T+ + L+A +++ GK +H + Q L F P
Sbjct: 198 ENE-GVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQ-LGFDP---------------- 239
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
FD NVI T+++ Y CG+L AR+LFD+ P R++V+W +MI+ Y Q+
Sbjct: 240 ------FDTNSCFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYG 293
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
R EA+ LF +M++ P+K +++++ C +G G+ +H + T
Sbjct: 294 RGAEALRLFVDMEMAGFVPNKATFLSVISACTHMGFRSTGRSLHARALRASFHEFVAIGT 353
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG-AK 419
AL++MYAK G + AL+IF +LR+KD +WT++I GLA+ GK +AL +F +M
Sbjct: 354 ALMDMYAKAGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVA 413
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD IT+I VL ACSH GLV+EG++ F +MTEVY I+P +EHYGC+IDLL RAG EAEE
Sbjct: 414 PDQITYIAVLWACSHLGLVEEGQKQFTSMTEVYGIEPTMEHYGCMIDLLSRAGHSKEAEE 473
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
L+ K+P + N I+ ++L+ C +YGNV + ++ + + ++E+ S + LL+NI+A
Sbjct: 474 LLMKMPTQPNATIL---SSILNGCEMYGNVGLANRVKSHIVELENSSSGVYVLLSNIHAK 530
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
A W+++ R +K + K G S +EI
Sbjct: 531 ACNWQEMKLARDMLKHKNIGKTLGNSFVEI 560
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 307/541 (56%), Gaps = 15/541 (2%)
Query: 38 LLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA 97
L YA K+F + L + N+ I F++ G FR++L F ++ P++ T V A
Sbjct: 84 LSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIASVLPA 143
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
V+ +VH +K G+E D YV +++ MY G++ KK+FD++ DK+VVS+
Sbjct: 144 CA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSY 200
Query: 158 NVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN 217
N ISG ++ DVF+ + + +P+ T+VS LSAC+ L + G++IH +
Sbjct: 201 NAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVV 260
Query: 218 Q-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEKAR 275
+ E+ F ++G AL+DMY KCGC A +F E+ ++N++ W SM++G + GQ + A
Sbjct: 261 KIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAV 320
Query: 276 DLFDRSPVR----DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+LF++ D W MI+G+ Q + EA F +MQ + + +LL C
Sbjct: 321 ELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRAC 380
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF--YELREKDAAS 389
+ L AL+ GK IHG+ I D ++TALI+MY KCG A +F ++++ D A
Sbjct: 381 SALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAF 440
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W ++I G NGK A E+F+QM +P+ T + +LS CSH G +D G + F M
Sbjct: 441 WNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMN 500
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
Y + P EH+GC++DLLGR+G L EA+ELI ++P E V ++ +LL ACR + +
Sbjct: 501 RDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP----EASVSVFASLLGACRHHSDS 556
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+GE++A L ++E +D + +L+NIYA RW DV VR+ M + G++K PGCSSI +
Sbjct: 557 ALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPPGCSSIGV 616
Query: 570 N 570
Sbjct: 617 T 617
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 204/391 (52%), Gaps = 36/391 (9%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I G +R++L L+SKL V FT+PF+ KA L +G+ +H ++KTG
Sbjct: 5 IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 64
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D Y ++ DMY L + K+F+EMP +++ S NV+ISG + F +A+ F++
Sbjct: 65 HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQ 124
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
+ G N P+ T+ S L AC + +EL ++H I +E + A++ MY CG
Sbjct: 125 VGLG-NFRPNSVTIASVLPACAS---VELDGQVHCLAIKLGVESDIYVATAVVTMYSNCG 180
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L A+++FD++ +KNV+ + + +SG + G D+F +D++ + +
Sbjct: 181 ELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVF-----KDLLESSGEV----- 230
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
P+ LV++L+ C++L + G+ IHG + + I D +V
Sbjct: 231 --------------------PNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMV 270
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
TAL++MY+KCG A IF EL ++ +W S+I G+ +NG+ + A+ELF Q+ G
Sbjct: 271 GTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEG 330
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+PD T+ ++S S G V E +FF+ M
Sbjct: 331 LEPDSATWNTMISGFSQQGQVVEAFKFFHKM 361
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 178/400 (44%), Gaps = 73/400 (18%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRE-RGVSPDNFTYPFV 94
G L+ A+K+F I +++YN I + G+ +F L E G P++ T +
Sbjct: 180 GELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSI 239
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG-------------------- 134
A L ++ G ++HG VVK + FDT V +++DMY
Sbjct: 240 LSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRN 299
Query: 135 -------VLGKICNVK-----KLFDEMP----DKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ G + N + +LF+++ + D +WN ISG + + +A F
Sbjct: 300 LVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFH 359
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKC 237
+M Q ++ ++ S L AC+AL L+ GKEIH + I ++ + AL+DMY KC
Sbjct: 360 KM-QSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKC 418
Query: 238 GCLSEARELFDEMPNK--NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
G AR +F + K + W +M+SGY G
Sbjct: 419 GHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNG-------------------------- 452
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR-ITV 354
++ A +F +MQ +++P+ LV++L+ C+ G +++G + +N + +
Sbjct: 453 -----KYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNP 507
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
+ ++++ + G +++A E+ +E+ E + + S++
Sbjct: 508 TSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLL 547
>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g17630
gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 212/659 (32%), Positives = 355/659 (53%), Gaps = 57/659 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA----YNL 58
Q +Q+ AQ+ +L ++ + G LL A +F ++ S LL+ +N
Sbjct: 71 QCRQVHAQVLLSDFIFRSGSLAANLI-SVYARLGLLLDARNVFETV-SLVLLSDLRLWNS 128
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
++KA G + +L L+ +R+RG++ D + P + +A +LG H V++ G
Sbjct: 129 ILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG 188
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG--------------- 163
L+ + +V N ++ +Y G++ + LF EMP ++ +SWNV I G
Sbjct: 189 LKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFE 248
Query: 164 --------------------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
H +C +FED + F MR N + E V S C L
Sbjct: 249 WMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV-FFSVCAEL 307
Query: 204 KNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+ L + +++H Y+ + E+ P NAL+ +Y K G + +A LF ++ NK + W S+
Sbjct: 308 EALSIAEKVHGYVIKGGFEEYLPSR-NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSL 366
Query: 262 VSGYVNCGQLEKARDLFDR--------SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
++ +V+ G+L++A LF + ++V WT++I G R D+++ FR+MQ
Sbjct: 367 ITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
++ + + +L+ CA+L AL G+ IHG++ ++ + +V AL+ MYAKCGL+
Sbjct: 427 FSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLS 486
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+ +F +R+KD SW SII G M+G KAL +F +MIS G PD I + VLSACS
Sbjct: 487 EGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACS 546
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H GLV++GR F +M++ + ++P+ EHY C++DLLGR G L EA E+++ +P E V
Sbjct: 547 HAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPK---V 603
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+ GALL++CR++ NVD+ E +A+ L +E + + + LL+NIY++ RWE+ NVR
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALA 663
Query: 554 KEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDN 612
K+ ++KV G S IE+ ++F G SE + IY +L+ + +L K +G+N
Sbjct: 664 KKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLK-KGPTHDGNN 721
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 314/536 (58%), Gaps = 15/536 (2%)
Query: 46 GSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVK 105
G ++ P L +N +IK+ + R++LLLF + E GVS D F+ V KA LG VK
Sbjct: 74 GEMEDPFL--WNAVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFVK 131
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
G ++HG++ KTGL D ++ N ++ +Y G + +++FD MP +D VS+N I+G+V
Sbjct: 132 GGMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYV 191
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EFT 223
KC E A ++F +LMP E ++S S + G I + E+ E
Sbjct: 192 KCGLIESARELF-------DLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKD 244
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
I N+++D Y K G + +A+ LFD MP ++V+ +M+ GY G + +A+ LFD+ P+
Sbjct: 245 LISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPL 304
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKW 342
RD+V + +M+ GYVQ EA+ +F +M+ L PD+ LV +L+ AQLG L +
Sbjct: 305 RDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATD 364
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H YI E + + + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G
Sbjct: 365 MHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVHGL 424
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
A + Q+ PDDITF+GVL+ACSH GLV EG F M ++I+P+L+HYG
Sbjct: 425 GESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 484
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C++D+L R+G ++ A+ LI ++P E N++I + L+AC + + GE +A L
Sbjct: 485 CMVDILSRSGSIELAKNLIEEMPIEPNDVI---WRTFLTACSHHKEFETGELVAKHLILQ 541
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ S + LL+N+YAS W+DV VR MKE + K+PGCS IE++G +HEF V
Sbjct: 542 AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 597
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 214/441 (48%), Gaps = 53/441 (12%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGK---------------ICNVKKLFDEMPDKD 153
K+HG ++KTG+ ++ + I+ + + +C+ F +D
Sbjct: 23 KIHGGLIKTGIIKNSNLTTRIVLAFAASRRPYLAEFARCVFHEYHVCS----FSPGEMED 78
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
WN I H A+ +F M + + D+ ++ L AC+ L ++ G +IH
Sbjct: 79 PFLWNAVIKSHSHGKDPRQALLLFCLMLEN-GVSVDKFSLSLVLKACSRLGFVKGGMQIH 137
Query: 214 RYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
++ + ++ + + N L+ +Y KCGCL AR++FD MP ++ + + SM++GYV CG +E
Sbjct: 138 GFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLIE 197
Query: 273 KARDLFDRSP--VRDIVLWTAMINGYVQFNR-FDEAVALFREMQIIRLKPDKFILV--AL 327
AR+LFD P +++++ W +MI+GY Q + + A LF EM P+K ++ ++
Sbjct: 198 SARELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEM------PEKDLISWNSM 251
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
+ G + G +E K + + D V +I+ YAK G + +A +F ++ +D
Sbjct: 252 IDGYVKHGRIEDAKGLFDVMPRR----DVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDV 307
Query: 388 ASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
++ S++ G N +ALE+F+ M PD+ T + +LSA + G + +
Sbjct: 308 VAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKA----- 362
Query: 447 TMTEVYQIQPKLEHYG----CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
T +Y ++ + G LID+ + G + A + I N++ + + A++
Sbjct: 363 TDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS----IDHWNAMIGG 418
Query: 503 CRIYGNVDMGEKLAALLEKIE 523
++G +GE +L +IE
Sbjct: 419 LAVHG---LGESAFNMLLQIE 436
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/497 (38%), Positives = 287/497 (57%), Gaps = 8/497 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMD--MYGVLGKICNVKKL-FDEMPDKDVVSWNVSISGH 164
+++H ++KTGL D+Y + + ++ FD D WN+ I G
Sbjct: 60 KQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 119
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFT 223
E ++ +++RM C+ + T S L AC+ L LE +IH I + E
Sbjct: 120 SCSDEPERSLLLYQRM-LCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEND 178
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
N+L++ Y G A LFD +P + + W S++ GY G+++ A LF +
Sbjct: 179 VYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVE 238
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
++ + WT MI+GYVQ EA+ LF EMQ ++PD L L+ CAQLGALEQGKWI
Sbjct: 239 KNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 298
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H Y+ + RI +D+V+ LI+MYAKCG + +ALE+F ++ K +WT++I G A +G
Sbjct: 299 HSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHG 358
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
+A+ F +M G KP+ ITF VL+ACS+ GLV+EG+ F M Y ++P +EHYGC
Sbjct: 359 REAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGC 418
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLL RAGLLDEA+ I+++P + N +I +GALL ACRI+ N+++GE++ +L I+
Sbjct: 419 VVDLLSRAGLLDEAKRFIQEMPLKPNAVI---WGALLKACRIHKNIELGEEIGEILIAID 475
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
+ ANI+A +W+ R+ MKE GV KVPGCS+I + G HEFL GD SH
Sbjct: 476 PYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 535
Query: 584 SEMKEIYSMLDRMAKTL 600
E+++I S M + L
Sbjct: 536 PEIEKIQSKWKIMRRKL 552
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 203/442 (45%), Gaps = 71/442 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYNLLIK 61
+LKQI A++ + GL Q+ + K + C + + L YA+ +F P +NL+I+
Sbjct: 58 ELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 117
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
F+ +SLLL+ ++ + +T+P + KA L +++ ++H + K G E
Sbjct: 118 GFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEN 177
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
D Y NS+++ Y G LFD +P D VSWN I G+ K + + A+ +FR+M
Sbjct: 178 DVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMV 237
Query: 181 -----------------------------RQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
Q ++ PD ++ + LSAC L LE GK
Sbjct: 238 EKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 297
Query: 212 IHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH Y+ + + ++G L+DMY KCG + EA E+F + K+V WT+++SGY G
Sbjct: 298 IHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGH 357
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
EA++ F EMQ + +KP+ +LT
Sbjct: 358 GR-------------------------------EAISKFMEMQKMGIKPNVITFTTVLTA 386
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELREK-DA 387
C+ G +E+GK I Y E + + ++++ ++ GL+++A E+ K +A
Sbjct: 387 CSYTGLVEEGKLIF-YNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNA 445
Query: 388 ASWTSIICGLAMNGKINKALEL 409
W +++ +I+K +EL
Sbjct: 446 VIWGALLKAC----RIHKNIEL 463
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 307/541 (56%), Gaps = 15/541 (2%)
Query: 38 LLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA 97
L YA K+F + L + N+ I F++ G FR++L F ++ P++ T V A
Sbjct: 144 LSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIASVLPA 203
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
V+ +VH +K G+E D YV +++ MY G++ KK+FD++ DK+VVS+
Sbjct: 204 CA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSY 260
Query: 158 NVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN 217
N ISG ++ DVF+ + + +P+ T+VS LSAC+ L + G++IH +
Sbjct: 261 NAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVV 320
Query: 218 Q-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEKAR 275
+ E+ F ++G AL+DMY KCGC A +F E+ ++N++ W SM++G + GQ + A
Sbjct: 321 KIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAV 380
Query: 276 DLFDRSPVR----DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+LF++ D W MI+G+ Q + EA F +MQ + + +LL C
Sbjct: 381 ELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRAC 440
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF--YELREKDAAS 389
+ L AL+ GK IHG+ I D ++TALI+MY KCG A +F ++++ D A
Sbjct: 441 SALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAF 500
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W ++I G NGK A E+F+QM +P+ T + +LS CSH G +D G + F M
Sbjct: 501 WNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMN 560
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
Y + P EH+GC++DLLGR+G L EA+ELI ++P E V ++ +LL ACR + +
Sbjct: 561 RDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP----EASVSVFASLLGACRHHSDS 616
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+GE++A L ++E +D + +L+NIYA RW DV VR+ M + G++K PGCSSI +
Sbjct: 617 ALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPPGCSSIGV 676
Query: 570 N 570
Sbjct: 677 T 677
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 204/391 (52%), Gaps = 36/391 (9%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I G +R++L L+SKL V FT+PF+ KA L +G+ +H ++KTG
Sbjct: 65 IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 124
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D Y ++ DMY L + K+F+EMP +++ S NV+ISG + F +A+ F++
Sbjct: 125 HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQ 184
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
+ G N P+ T+ S L AC + +EL ++H I +E + A++ MY CG
Sbjct: 185 VGLG-NFRPNSVTIASVLPACAS---VELDGQVHCLAIKLGVESDIYVATAVVTMYSNCG 240
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L A+++FD++ +KNV+ + + +SG + G D+F +D++ + +
Sbjct: 241 ELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVF-----KDLLESSGEV----- 290
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
P+ LV++L+ C++L + G+ IHG + + I D +V
Sbjct: 291 --------------------PNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMV 330
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
TAL++MY+KCG A IF EL ++ +W S+I G+ +NG+ + A+ELF Q+ G
Sbjct: 331 GTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEG 390
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+PD T+ ++S S G V E +FF+ M
Sbjct: 391 LEPDSATWNTMISGFSQQGQVVEAFKFFHKM 421
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 178/400 (44%), Gaps = 73/400 (18%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRE-RGVSPDNFTYPFV 94
G L+ A+K+F I +++YN I + G+ +F L E G P++ T +
Sbjct: 240 GELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSI 299
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG-------------------- 134
A L ++ G ++HG VVK + FDT V +++DMY
Sbjct: 300 LSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRN 359
Query: 135 -------VLGKICNVK-----KLFDEMP----DKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ G + N + +LF+++ + D +WN ISG + + +A F
Sbjct: 360 LVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFH 419
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKC 237
+M Q ++ ++ S L AC+AL L+ GKEIH + I ++ + AL+DMY KC
Sbjct: 420 KM-QSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKC 478
Query: 238 GCLSEARELFDEMPNK--NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
G AR +F + K + W +M+SGY G
Sbjct: 479 GHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNG-------------------------- 512
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR-ITV 354
++ A +F +MQ +++P+ LV++L+ C+ G +++G + +N + +
Sbjct: 513 -----KYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNP 567
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
+ ++++ + G +++A E+ +E+ E + + S++
Sbjct: 568 TSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLL 607
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 218/635 (34%), Positives = 335/635 (52%), Gaps = 77/635 (12%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-----YAEKIFGSIQSPCLLAYN 57
L +I AQ GL + ++L++F T + LL ++ ++F ++SP N
Sbjct: 19 HLLEIHAQFLASGLLADAYAASRLLLFTTSATAARLLPQPLHHSLQLFRLVRSPNAFTCN 78
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV------H 111
LI+A ++G L++ + +PD +T+P + A G+ ++G +V H
Sbjct: 79 TLIRAALRQGLPHLCFPLYASM---PAAPDTYTHPLLAAACAARGDAREGRQVHSHAVKH 135
Query: 112 GY-------------------------VVKTGLEFDTYVCNSIMDMY----------GVL 136
G+ V G +D N+I+ Y GV
Sbjct: 136 GFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVGVF 195
Query: 137 ---------------------GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
G + + +FD +D +W IS + F +A+
Sbjct: 196 ARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVEALA 255
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMY 234
VF MR+ DE +VS ++AC + ++ G+ H + + L + NAL+ MY
Sbjct: 256 VFSDMREE-GWPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMY 314
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
C + AR LFD + + W SM+SGY+ G++E A+ LF+ P +D V W+AMI
Sbjct: 315 SSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIA 374
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
G VQ N+ EA+ +F M+ +KPD+ LV++++ C L ALEQGK +H YI + + +
Sbjct: 375 GCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNI 434
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM- 413
V+ T+LI+MY KCG +E ALE+F + EK W ++I GLAMNG + ++L++FS+M
Sbjct: 435 TIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEME 494
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
SG A P +ITF GVLSAC HGGLV+EGR+FF M YQI P + HYGC++DLLGRAG
Sbjct: 495 TSGIAVPSEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGY 554
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
+ EAE+LI+ +P + VP +GALL AC + + ++GE++ L K++ F T+L
Sbjct: 555 VREAEDLIQSMPMSPD---VPAWGALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTML 611
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+NIYAS W+ V ++R MK+ V KV GCS +E
Sbjct: 612 SNIYASEGMWQCVKDLRGSMKQH-VAKVAGCSVVE 645
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 327/594 (55%), Gaps = 42/594 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
+ A + + G Q + N V + G+ +A ++F + L++++ +I + +
Sbjct: 24 SLHAAVLKTGTQSDVFMSNH--VLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G + ++ L+S++ + P+ + + V A L V G+K+H +K G E ++V
Sbjct: 82 AGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
NS++ MY + + +F P+ + VS+N I+G V+ + E ++ F+ MRQ
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQ-G 197
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
L+PD + L CT +NL+ G E+H + + L+ TP +GN ++ MY + + EA
Sbjct: 198 LIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAE 257
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+ F + K+VI W ++++ +C K
Sbjct: 258 KAFRLIEEKDVISWNTLIAACSHCDDHAKG------------------------------ 287
Query: 305 AVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
+ +F+ M + ++PD F + L CA L ++ GK IH ++ R+ D V AL+
Sbjct: 288 -LRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALV 346
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKCG I A +IF ++ + SW +II G +G +A+ELF QM + G +PD +
Sbjct: 347 NMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSV 406
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFIG+L+AC+H GLVD+G+ +FN+M E Y I P +EH+ CLID+LGRAG L+EAEE +RK
Sbjct: 407 TFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRK 466
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
P N+ +++ +LLSA R++G+V +GE+LA L K++ +S + LL+N+YAS W
Sbjct: 467 FPFWNDPVVLV---SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMW 523
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ V R+++K G++K PG S IE+NG + +F +GD +H +KEI +L ++
Sbjct: 524 DSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLS 577
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 200/427 (46%), Gaps = 57/427 (13%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G +H V+KTG + D ++ N +++MY G +++FDEM +K++VSW+ ISG+ +
Sbjct: 22 GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
+ A+D++ +M L+P+E S +SAC +L + LG++IH R + E
Sbjct: 82 AGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISF 137
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ N+L+ MY KC S+A +F P N + + ++++G+V QLE+ + F
Sbjct: 138 VSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFK------ 191
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
L R+ +I PD+F + +L C L++G +H
Sbjct: 192 ----------------------LMRQQGLI---PDRFAFMGVLGICTTTENLKRGAELHC 226
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+ + + +I MY++ LI++A + F + EKD SW ++I + K
Sbjct: 227 QTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAK 286
Query: 406 ALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM--TEVYQIQPKLEHYG 462
L +F M +PDD TF L+AC+ + G++ + T +YQ L
Sbjct: 287 GLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQ---DLGVGN 343
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
L+++ + G + A ++ K+ + N N II +GN +GE+ L
Sbjct: 344 ALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAG-----------FGNHGLGERAVEL 392
Query: 519 LEKIESK 525
E++ +
Sbjct: 393 FEQMNAS 399
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 42/314 (13%)
Query: 192 TVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T+ S L C+ K L G +H + + M N +L+MY KCG + AR++FDEM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
KN++ W++M+SGY G+ + A DL+ +
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQ------------------------------ 94
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+ L P++++ ++++ CA L A+ G+ IH + + V+ +LI MY KC
Sbjct: 95 ----MFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCN 150
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
AL +F E + S+ ++I G N ++ + LE F M G PD F+GVL
Sbjct: 151 QCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLG 210
Query: 431 ACSHGGLVDEGRRFF-NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
C+ + G T+ P + + +I + L+ EAE+ R I E
Sbjct: 211 ICTTTENLKRGAELHCQTVKLNLDSTPFIGN--VIITMYSELNLIQEAEKAFRLI--EEK 266
Query: 490 EIIVPLYGALLSAC 503
++I + L++AC
Sbjct: 267 DVIS--WNTLIAAC 278
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 278/443 (62%), Gaps = 6/443 (1%)
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF-RRMRQGCNLMPDEGTVVSTLSACTAL 203
+F ++P+ +V SWN I H+ C +E A++ F R++ P+E S + AC L
Sbjct: 67 IFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGL 126
Query: 204 KNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
+ + G ++H I L+ +G +L+DMY K + A ++FDEMP ++V+ W +MV
Sbjct: 127 EAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMV 186
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDK 321
SGY CG LE AR +FD+ RD++ W AMI GYVQ ++ +A+ +F EMQ + + PD
Sbjct: 187 SGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDD 246
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
LV++L+ CA +GAL+ G+WI ++ ++ + ALI+MYAKCG +E+A IF
Sbjct: 247 VTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDG 306
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+RE+D SW+++ICG +G ++A +S+M+ G KP+++TF+G+LSACSH GLVD+G
Sbjct: 307 MRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKG 366
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
F+ M + Y+I PK+ HYGC+IDLL RAG LDEAE+LI +P E N I+ +GALL
Sbjct: 367 IELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIV---WGALLG 423
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
CRI+ + GE++A L +++S+ + + +A AS R +D N +M+ G+ K
Sbjct: 424 GCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGIIKD 483
Query: 562 PGCSSIEINGIIHEFLVGDPSHS 584
PGCS IE++ +HEF D + S
Sbjct: 484 PGCSKIEVHNTVHEFKECDNTSS 506
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 209/432 (48%), Gaps = 71/432 (16%)
Query: 3 QLKQIQAQ-IFQIGLQQNPETLN-KLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
QL QIQAQ I L +P + KL+ C ++ NL +A+ IF + +P + ++N +I
Sbjct: 26 QLLQIQAQLITNPPLSLHPNLIAVKLIGACA--ANANLYHAQLIFAQLPNPNVFSWNAII 83
Query: 61 KAFAKKGSFRKSLLLFSKLRE--RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
KA G++ +L F++ +P+ + Y + KA L + G KVH V+K+G
Sbjct: 84 KAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSG 143
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP---------------------------- 150
L+ + ++ S++DMY + + ++FDEMP
Sbjct: 144 LDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFD 203
Query: 151 ---DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
++DV+SWN I G+V+ ++ DA++VF M++ ++PD+ T+VS LSAC + L+
Sbjct: 204 QMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALD 263
Query: 208 LGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
G+ I R++ + +GNAL+DMY KCG + EAR +FD M ++VI W++M+ G
Sbjct: 264 FGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSG 323
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G DEA + +M +KP++ +
Sbjct: 324 THGDA-------------------------------DEAFGYYSKMLECGVKPNEVTFMG 352
Query: 327 LLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-E 384
LL+ C+ G +++G + I E RI +I++ ++ G +++A ++ + E
Sbjct: 353 LLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIE 412
Query: 385 KDAASWTSIICG 396
+ W +++ G
Sbjct: 413 PNVIVWGALLGG 424
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 66/303 (21%)
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L A+ +F ++PN NV W +++ ++NCG E A + F+R + L +A
Sbjct: 61 LYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQ----LSLPSAP------- 109
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
P+++I +L+ CA L A+ G +H + ++ + + +
Sbjct: 110 ------------------NPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLG 151
Query: 360 TALIEMYAK-------------------------------CGLIEKALEIFYELREKDAA 388
T+L++MY K CG +E A +F ++ E+D
Sbjct: 152 TSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVI 211
Query: 389 SWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SW ++I G NGK + A+E+F +M GG PDD+T + VLSAC+H G +D G R+ +
Sbjct: 212 SWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFG-RWIDR 270
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
L LID+ + G ++EA R+I + E V + ++ +G
Sbjct: 271 FVGWRGRGLNLYLGNALIDMYAKCGTMEEA----RRIFDGMRERDVISWSTMICGSGTHG 326
Query: 508 NVD 510
+ D
Sbjct: 327 DAD 329
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 327/594 (55%), Gaps = 42/594 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
+ A + + G Q + N V + G+ +A ++F + L++++ +I + +
Sbjct: 24 SLHAAVLKTGTQSDVFMSNH--VLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G + ++ L+S++ + P+ + + V A L V G+K+H +K G E ++V
Sbjct: 82 AGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
NS++ MY + + +F P+ + VS+N I+G V+ + E ++ F+ MRQ
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQ-G 197
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
L+PD + L CT +NL+ G E+H + + L+ TP +GN ++ MY + + EA
Sbjct: 198 LIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAE 257
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
+ F + K+VI W ++++ +C K
Sbjct: 258 KAFRLIEEKDVISWNTLIAACSHCDDHAKG------------------------------ 287
Query: 305 AVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
+ +F+ M + ++PD F + L CA L ++ GK IH ++ R+ D V AL+
Sbjct: 288 -LRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALV 346
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKCG I A +IF ++ + SW +II G +G +A+ELF QM + G +PD +
Sbjct: 347 NMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSV 406
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFIG+L+AC+H GLVD+G+ +FN+M E Y I P +EH+ CLID+LGRAG L+EAEE +RK
Sbjct: 407 TFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRK 466
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
P N+ +++ +LLSA R++G+V +GE+LA L K++ +S + LL+N+YAS W
Sbjct: 467 FPFWNDPVVLV---SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMW 523
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ V R+++K G++K PG S IE+NG + +F +GD +H +KEI +L ++
Sbjct: 524 DSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLS 577
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 200/427 (46%), Gaps = 57/427 (13%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G +H V+KTG + D ++ N +++MY G +++FDEM +K++VSW+ ISG+ +
Sbjct: 22 GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
+ A+D++ +M L+P+E S +SAC +L + LG++IH R + E
Sbjct: 82 AGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISF 137
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ N+L+ MY KC S+A +F P N + + ++++G+V QLE+ + F
Sbjct: 138 VSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFK------ 191
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
L R+ +I PD+F + +L C L++G +H
Sbjct: 192 ----------------------LMRQQGLI---PDRFAFMGVLGICTTTENLKRGAELHC 226
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+ + + +I MY++ LI++A + F + EKD SW ++I + K
Sbjct: 227 QTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAK 286
Query: 406 ALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM--TEVYQIQPKLEHYG 462
L +F M +PDD TF L+AC+ + G++ + T +YQ L
Sbjct: 287 GLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQ---DLGVGN 343
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
L+++ + G + A ++ K+ + N N II +GN +GE+ L
Sbjct: 344 ALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAG-----------FGNHGLGERAVEL 392
Query: 519 LEKIESK 525
E++ +
Sbjct: 393 FEQMNAS 399
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 42/314 (13%)
Query: 192 TVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T+ S L C+ K L G +H + + M N +L+MY KCG + AR++FDEM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
KN++ W++M+SGY G+ + A DL+ +
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQ------------------------------ 94
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+ L P++++ ++++ CA L A+ G+ IH + + V+ +LI MY KC
Sbjct: 95 ----MFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCN 150
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
AL +F E + S+ ++I G N ++ + LE F M G PD F+GVL
Sbjct: 151 QCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLG 210
Query: 431 ACSHGGLVDEGRRFF-NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
C+ + G T+ P + + +I + L+ EAE+ R I E
Sbjct: 211 ICTTTENLKRGAELHCQTVKLNLDSTPFIGN--VIITMYSELNLIQEAEKAFRLI--EEK 266
Query: 490 EIIVPLYGALLSAC 503
++I + L++AC
Sbjct: 267 DVIS--WNTLIAAC 278
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 309/568 (54%), Gaps = 36/568 (6%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ +G + ++F + ++++ +I + G +++L+ FS++ V D++T+
Sbjct: 161 YTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTF 220
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
KA G + G ++H +K G + ++V N++ MY GK+ LF++M
Sbjct: 221 AIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM 280
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+DVVSW I+ V+ + E AV F RMR+ ++ P+E T + +S C L +E G++
Sbjct: 281 RDVVSWTTIITTLVQMGQEECAVQAFIRMRES-DVSPNEYTFAAVISGCANLARIEWGEQ 339
Query: 212 IHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H I + L + + N+++ MY KC GQ
Sbjct: 340 LHALILHLGLAASLSVENSIMTMYAKC-------------------------------GQ 368
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
L + +F RDIV W+ +I GY Q EA L M++ KP +F L ++L+
Sbjct: 369 LTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSA 428
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C + LE GK +H Y+ + A+V +ALI MY KCG IE+A IF D SW
Sbjct: 429 CGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSW 488
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
T++I G A +G + ++LF ++ G +PD +TFIGVLSACSH GLVD G +FN M++
Sbjct: 489 TAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSK 548
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
YQI P EHYGC+IDLL RAG L +AE +I +P ++++ + LL ACR++G+V+
Sbjct: 549 KYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV---WSTLLRACRVHGDVE 605
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
G + A + ++E + H LANIYAS +W + ++R+ MK GV K PG S I++
Sbjct: 606 RGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVK 665
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
++ F+ GD SH + ++IY+MLD +A
Sbjct: 666 DLVFAFVAGDRSHPQGEDIYNMLDLLAS 693
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFIL 324
V G L AR +FD+ +D + WT +I+GYV N EA+ LF+ M++ L+ D FIL
Sbjct: 60 VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
C + G+ +HGY + + V +AL++MY K G I + +F+E+
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
++ SWT+II GL G +AL FS+M + D TF L AC+ G ++ GR
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239
Query: 445 F---------------NTMTEVYQIQPKLEH---------------YGCLIDLLGRAGLL 474
NT+ +Y KLE+ + +I L + G
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 299
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ A + ++ + + A++S C ++ GE+L AL+
Sbjct: 300 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 316/572 (55%), Gaps = 42/572 (7%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER---GVSPDNFTYPF 93
+L A K F + L+ +N LI +++ G R +L ++ + + G+ PD T+
Sbjct: 109 DLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSS 168
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD 153
A +G++ +G ++ V +G D+ V N++++MY G + + +K+FD + ++D
Sbjct: 169 ALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRD 228
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
V++WN ISG+ K A+++F+RM + P+ T + L+ACT L++LE G+ IH
Sbjct: 229 VIAWNTMISGYAKQGAATQALELFQRMGPN-DPKPNVVTFIGLLTACTNLEDLEQGRAIH 287
Query: 214 RYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
R + ++ E ++GN LL+MY KC LE
Sbjct: 288 RKVREDGYESDLVIGNVLLNMYTKCS------------------------------SSLE 317
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+AR +F+R RD++ W +I YVQ+ + +A+ +F++MQ+ + P++ L +L+ CA
Sbjct: 318 EARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACA 377
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
LGA QGK +H I R D V+ +L+ MY +CG ++ + +F +R+K SW++
Sbjct: 378 VLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWST 437
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
+I A +G LE F +++ G DD+T + LSACSHGG++ EG + F +M +
Sbjct: 438 LIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDH 497
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
+ P H+ C++DLL RAG L+ AE LI +P + + + +LLS C+++ +
Sbjct: 498 GLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA---WTSLLSGCKLHNDTKRA 554
Query: 513 EKLAALLEKIESKDS-SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
++A L ++ES+D S TLL+N+YA A RW+DV R + RK PGCS IEIN
Sbjct: 555 ARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR---RAARKNPGCSYIEIND 611
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+HEF+ GD SH E + I + + R++K + D+
Sbjct: 612 TVHEFVAGDKSHPEEELIAAEIKRLSKQMKDA 643
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 220/446 (49%), Gaps = 37/446 (8%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F +I+ P +++ L++ AFA+ G +R++L + ++ G+ PD +
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAI 65
Query: 96 KAVGWLGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
++K+G+ +H +++T LEFD + +++ MY + +K FDEM K +
Sbjct: 66 GVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTL 125
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRM--RQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
V+WN I+G+ + A+ +++ M + + PD T S L ACT + ++ G+EI
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREI 185
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
R + I+ NAL++MY KCG L AR++FD + N++VI W +M+SGY G
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAA 245
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+A +LF R D KP+ + LLT C
Sbjct: 246 TQALELFQRMGPNDP-------------------------------KPNVVTFIGLLTAC 274
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC-GLIEKALEIFYELREKDAASW 390
L LEQG+ IH + E+ D V+ L+ MY KC +E+A ++F +R +D +W
Sbjct: 275 TNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITW 334
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+I G+ AL++F QM P++IT VLSAC+ G +G + + +
Sbjct: 335 NILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG-KAVHALIA 393
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDE 476
+ + + L+++ R G LD+
Sbjct: 394 SGRCKADVVLENSLMNMYNRCGSLDD 419
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 209/466 (44%), Gaps = 79/466 (16%)
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDE 190
MYG G + + +F + + VSW + ++ + + +A+ +RRM +G L PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG--LRPDG 58
Query: 191 GTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
V + C++ K+L+ G+ +H I + LEF I+G AL+ MY +C L AR+ FD
Sbjct: 59 AMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFD 118
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKA----RDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
EM K ++ W ++++GY G A +D+ +SP
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPE--------------------- 157
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
+KPD + L C +G + QG+ I + D++V ALI
Sbjct: 158 -----------GMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALIN 206
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY+KCG +E A ++F L+ +D +W ++I G A G +ALELF +M KP+ +T
Sbjct: 207 MYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVT 266
Query: 425 FIGVLSACSHGGLVDEGRRFF--------------------------NTMTEVYQIQPKL 458
FIG+L+AC++ +++GR +++ E Q+ ++
Sbjct: 267 FIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERM 326
Query: 459 E-----HYGCLIDLLGRAGLLDEAEELIRKIPNEN---NEIIVPLYGALLSACRIYGNVD 510
+ LI + G +A ++ +++ EN NEI + +LSAC + G
Sbjct: 327 RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL---SNVLSACAVLGAKR 383
Query: 511 MGEKLAALLEKIESK-DSSFHTLLANIYASANRWEDVTNVRQKMKE 555
G+ + AL+ K D L N+Y +D V +++
Sbjct: 384 QGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 220/450 (48%), Gaps = 38/450 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
++Q ++I+A+ G + N L+ + G+L A K+F +++ ++A+N +I
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINM--YSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AK+G+ ++L LF ++ P+ T+ + A L ++++G +H V + G E
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYE 296
Query: 121 FDTYVCNSIMDMYG-VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D + N +++MY + +++F+ M +DV++WN+ I +V+ + +DA+D+F++
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M Q N+ P+E T+ + LSAC L GK +H I + + ++ N+L++MY +CG
Sbjct: 357 M-QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCG 415
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L + +F + +K+++ W+++++ Y G + F W + G
Sbjct: 416 SLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHF----------WELLQEG--- 462
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAV 357
L D +V+ L+ C+ G L++G + + ++ + D
Sbjct: 463 ------------------LAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYR 504
Query: 358 VATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISG 416
++++ ++ G +E A + +++ DA +WTS++ G ++ +A + ++
Sbjct: 505 HFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL 564
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
++ + T + + + G D+ R+ N
Sbjct: 565 ESEDEHSTVTLLSNVYAEAGRWDDVRKTRN 594
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 304/537 (56%), Gaps = 38/537 (7%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+K G+ +H + +KT L F T++ N ++D Y I + K+F +P K+ SWN+ IS
Sbjct: 29 HLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIIS 88
Query: 163 GHVKCMRFEDA-------------------------------VDVFRRMRQGC-NLMPDE 190
+ + F +A ++VF+ M + C N++ DE
Sbjct: 89 AYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDE 148
Query: 191 GTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T+VS + +C +L EL +++H I L I+GNAL+D Y KCG + +F
Sbjct: 149 FTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSR 208
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
MP ++V+ WTSMV+ Y +LE A LF + ++ V WTA+I G+ Q R DEA+ LF
Sbjct: 209 MPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLF 268
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT---VDAVVATALIEMY 366
+M+ + P F ++L+ CA L + +GK IHG+I + + + ALI+MY
Sbjct: 269 EQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMY 328
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
KCG + A +F + EKD SW S+I G A NG ++L +F +MI +P+ +TF+
Sbjct: 329 CKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFL 388
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
G+LSAC H GLV EG R ++M + Y + P+ +HY +IDLLGR L+EA LI++ P
Sbjct: 389 GLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPK 448
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
++ V ++GALL ACRI+GN+D+ + A +L ++E +++ + ++ NIYA+A+RW++
Sbjct: 449 GSDH--VGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDEA 506
Query: 547 TNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
VR+ M E G+RK CS IE+ H+F+ + SH ++ E+Y ++ + + DS
Sbjct: 507 RQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKERSHCQINEVYEVIHNLVDQMYDS 563
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 177/383 (46%), Gaps = 53/383 (13%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+L P S +S C ++L+LGK +H +I L FT + N L+D Y KC + A
Sbjct: 9 SLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSA 68
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++F +P KN W ++S Y G +A +L D+ P ++V + ++I+G
Sbjct: 69 HKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRK 128
Query: 304 EAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
E++ +F+ M Q + D+F LV+L+ CA LGA E + +HG + + ++ A
Sbjct: 129 ESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNA 188
Query: 362 LIEMYAKCG-------------------------------LIEKALEIFYELREKDAASW 390
LI+ Y KCG +E A +F +++EK+ SW
Sbjct: 189 LIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSW 248
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
T++I G A NG+ ++AL LF QM G P TF VLSAC+ L+ G+ +
Sbjct: 249 TALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHI-- 306
Query: 451 VYQIQPKLEHYGC-------LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
I+ Y C LID+ + G + A L + + ++ + + +L++
Sbjct: 307 ---IRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKD----IVSWNSLITG- 358
Query: 504 RIYGNVDMGEKLAALLEKIESKD 526
+ GE+ A+ E++ D
Sbjct: 359 --FAQNGHGEESLAVFERMIEAD 379
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 159/371 (42%), Gaps = 69/371 (18%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q ++F + +N + N ++ + G A + + P L++YN LI
Sbjct: 66 QSAHKVFHVLPVKNTHSWN--IIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGH 123
Query: 66 KGSFRKSLLLFSKLRER--GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G ++SL +F + ++ V D FT + + LG + +VHG + GL +
Sbjct: 124 HGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNI 183
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+ N+++D YG G+ +F MP++DVVSW ++ + + R EDA +F +M++
Sbjct: 184 IIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEK 243
Query: 184 CNL------------------------MPDEG------TVVSTLSACTALKNLELGKEIH 213
+ M +EG T S LSAC L + GKEIH
Sbjct: 244 NTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIH 303
Query: 214 RYINQEL---EFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+I + F I + NAL+DMYCKCG + A LF M K+++ W S+++G+ G
Sbjct: 304 GHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNG 363
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
E E++A+F M ++P+ + LL+
Sbjct: 364 HGE-------------------------------ESLAVFERMIEADIRPNHVTFLGLLS 392
Query: 330 GCAQLGALEQG 340
C G + +G
Sbjct: 393 ACCHTGLVSEG 403
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/554 (35%), Positives = 317/554 (57%), Gaps = 41/554 (7%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG----------EVKKGEK 109
+ F K R+ LLFS T+ F+FK + + +
Sbjct: 44 LNGFRKSIVVRRKKLLFS-----------LTFIFMFKLFVFFDFGSYFSRMNRTLTTAKA 92
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H ++VK G+ + N+++++YG G + ++FDEMP +D ++W ++ +
Sbjct: 93 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 152
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGN 228
+ VF + L PD+ + + AC L +++ G+++H +I E ++ +
Sbjct: 153 SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKS 212
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+L+DMY KCG L+ A+ +FD + KN I WT+MVSGY G+ E+A +LF PV+++
Sbjct: 213 SLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYS 272
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKP-DKFILVALLTGCAQLGALEQGKWIHGYI 347
WTA+I+G+VQ + EA ++F EM+ R+ D +L +++ CA L A G+ +HG
Sbjct: 273 WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG-- 330
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
ALI+MYAKC + A +IF +R +D SWTS+I G+A +G+ KAL
Sbjct: 331 ------------NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 378
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
L+ M+S G KP+++TF+G++ ACSH G V++GR F +MT+ Y I+P L+HY CL+DL
Sbjct: 379 ALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDL 438
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA-ALLEKIESKD 526
LGR+GLLDEAE LI +P +E P + ALLSAC+ G MG ++A L+ + KD
Sbjct: 439 LGRSGLLDEAENLIHTMPFPPDE---PTWAALLSACKRQGRGQMGIRIADHLVSSFKLKD 495
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
S + LL+NIYASA+ W V+ R+K+ EM VRK PG SS+E+ F G+ SH
Sbjct: 496 PSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLK 555
Query: 587 KEIYSMLDRMAKTL 600
++I+ +L ++ + +
Sbjct: 556 EDIFRLLKKLEEEM 569
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 48/223 (21%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
+++ A+ IF ++ ++++ LI A+ G K+L L+ + GV P+ T+ +
Sbjct: 342 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 401
Query: 97 AVGWLGEVKKGEKV-----HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A +G V+KG ++ Y ++ L+ Y C ++D+ G G + + L MP
Sbjct: 402 ACSHVGFVEKGRELFQSMTKDYGIRPSLQH--YTC--LLDLLGRSGLLDEAENLIHTMP- 456
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
PDE T + LSAC ++G
Sbjct: 457 ----------------------------------FPPDEPTWAALLSACKRQGRGQMGIR 482
Query: 212 IHRYINQELEFT-PIMGNALLDMYCKC---GCLSEARELFDEM 250
I ++ + P L ++Y G +SEAR EM
Sbjct: 483 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 525
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 323/599 (53%), Gaps = 16/599 (2%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P T + + H G A +F +I P +YN +I A A+ +LL +
Sbjct: 823 HPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAA 882
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
+ + +++ A + + G +VH V K+ D Y+ ++++DMY
Sbjct: 883 MHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEW 942
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+++F+ MP++++VSWN I+ + + +A+ +F M + +PDE T+ S +S
Sbjct: 943 PEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKA-GFVPDEVTLASVMS 1001
Query: 199 ACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
AC L G+++H + + F ++ NAL+DMY KCG AR +FD M +++V+
Sbjct: 1002 ACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVV 1061
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
TS+++GY +E A+ +F + ++++ W +I Y Q +EA+ LF ++
Sbjct: 1062 SETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRES 1121
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIH------GYINENRITVDAVVATALIEMYAKCG 370
+ P + +L C + L+ G+ H G+ + D V +L++MY K G
Sbjct: 1122 VWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG 1181
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
I+ ++F + +D SW ++I G A NG+ AL LF +M+ PD +T IGVLS
Sbjct: 1182 SIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLS 1241
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
AC H GLV+EGRR+F +MTE + I P +HY C+IDLLGRAG L E EELI+++ E +
Sbjct: 1242 ACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDA 1301
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+ L+ +LL +CR++ NV+MGE A L +++ ++S + LL+N+YA +W DV VR
Sbjct: 1302 V---LWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVR 1358
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD----RMAKTLLDSKQ 605
MK GV K PGCS IEI + FL D H EI+++L +M++ +DS+
Sbjct: 1359 SSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRIIQMQMSRVSVDSEN 1417
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 245/508 (48%), Gaps = 67/508 (13%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A + F I P +++N++++ + G ++ +F ++ GV P +T A
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD 264
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG-------------------------- 134
+++G +H +V++ G E +V +S++DMY
Sbjct: 265 NNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSI 324
Query: 135 -----VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
G+I + K++F+ M ++++VSWN ++G+++ M A+ +F++MRQ D
Sbjct: 325 VSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREF-D 383
Query: 190 EGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
T+ S LSACT + ++ G+E+H + I +PI+ NAL+ MY KCGCL A L
Sbjct: 384 AITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLL- 442
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
LF+ RD W ++I+GY + + + A+
Sbjct: 443 ----------------------------LFEMGSERDSYSWNSLISGYERHSMSEAALYA 474
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
+MQ + P++ + L CA + L+QG IH Y+ +D ++ + LI+MY K
Sbjct: 475 LTKMQS-EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCK 533
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
C + ++ IF +D W S+I G A +GK L+LF +M G K D +TF+G
Sbjct: 534 CRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGA 593
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L +C G V GR +F M + I P++EHY C+I+LLG+ G + E E+ + +P E
Sbjct: 594 LVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEP 652
Query: 489 NEIIVPLYGALLSACRIYGNVDMGEKLA 516
++ + CR YGN +GE+ A
Sbjct: 653 T---TAMWLRIFDCCREYGNRKLGERAA 677
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 235/471 (49%), Gaps = 12/471 (2%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
++N +I A ++ G ++L LFS + G+ P + T V ++ ++HG++
Sbjct: 118 SWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHI 177
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
K + + + +++D+YG + + ++ FD++ + + +SWNV + + + AV
Sbjct: 178 AKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAV 237
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDM 233
D+F RM + P TV + AC LE G+ IH ++ E + ++++DM
Sbjct: 238 DMFFRMLSA-GVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDM 296
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG + A+ LF+ P K+++ TS+VSG +CG++ A+ +F+ R++V W AM+
Sbjct: 297 YAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAML 356
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY++ A+ LF++M+ + D L ++L+ C + + +G+ +H + +
Sbjct: 357 TGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFF 416
Query: 354 VDAVVATALIEMYAKCGLIEKA--LEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
++ AL+ MY+KCG + A L +F E+D+ SW S+I G + AL +
Sbjct: 417 SSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALT 476
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGR 470
+M S P+ TF L+AC++ L+ +G + M Y+I L LID+ +
Sbjct: 477 KMQS-EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCK 533
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
D + + P+ + V L+ +++ C G + G L ++K
Sbjct: 534 CRQFDYSIRIFEARPSRD----VILWNSMIFGCAYSGKGEYGLDLFDEMQK 580
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 211/477 (44%), Gaps = 77/477 (16%)
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
+K+ +T++ N+++ Y LG++ + +++FDE+P + S+N +S H + R DA
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 175 DVFRRM------------------------------RQGCNLMPDEGTVVSTLSACTALK 204
+F + + + + + S LSAC A K
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 205 NLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+ G ++H +++ + +G+ALLDMY KC EAR +F+ MP +N++ W S+++
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
Y G PV EA+ LF M PD+
Sbjct: 967 CYEQNG------------PV-------------------GEALVLFVSMMKAGFVPDEVT 995
Query: 324 LVALLTGCAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
L ++++ CA L A +G+ +H + +R D V++ AL++MYAKCG A +F +
Sbjct: 996 LASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRM 1055
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+ S TS+I G A + + A +FSQM+ + + I + +++A + G +E
Sbjct: 1056 ASRSVVSETSLITGYARSANVEDAQMVFSQMV----EKNVIAWNVLIAAYAQNGEEEEAL 1111
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE------NNEIIVPLY 496
R F + + P YG +++ G L ++ + E E V +
Sbjct: 1112 RLFVRLKR-ESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVG 1170
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+L+ G++D G K + E++ ++D+ + +A R +D ++ ++M
Sbjct: 1171 NSLVDMYLKTGSIDDGAK---VFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERM 1224
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 131/249 (52%), Gaps = 5/249 (2%)
Query: 34 SHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPF 93
S G + A+++F ++ L+++N ++ + + +LLLF ++R+ D T
Sbjct: 330 SCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGS 389
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK--LFDEMPD 151
V A + ++ KGE+VH + +K G + N+++ MY G + + ++ LF+ +
Sbjct: 390 VLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSE 449
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+D SWN ISG+ + E A+ +M+ + P++ T S L+AC + L+ G +
Sbjct: 450 RDSYSWNSLISGYERHSMSEAALYALTKMQS--EVTPNQSTFSSALAACANIFLLKQGMQ 507
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH Y I + E I+ + L+DMYCKC + +F+ P+++VI W SM+ G G+
Sbjct: 508 IHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGK 567
Query: 271 LEKARDLFD 279
E DLFD
Sbjct: 568 GEYGLDLFD 576
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 169/397 (42%), Gaps = 77/397 (19%)
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
T++ N ++ G + + ++LFD MP +D SWN I+ + +A+ +F M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNM-N 143
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLS 241
+ P + T+ S LS C +L +++H +I ++ + I+G AL+D+Y C L+
Sbjct: 144 SLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLA 203
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+AR FD++ N I W +V Y G + A D+F R M++ V
Sbjct: 204 DARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFR-----------MLSAGV---- 248
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+P + + + C ALE+G+ IH ++ + V ++
Sbjct: 249 ----------------RPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSS 292
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI------------------ 403
+++MYAKCG ++ A +F KD TSI+ GLA G+I
Sbjct: 293 VVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSW 352
Query: 404 -------------NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
AL LF QM + D IT VLSAC+ G++D G+ E
Sbjct: 353 NAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACT--GILDIGKG-----EE 405
Query: 451 VYQIQPKLEHYG------CLIDLLGRAGLLDEAEELI 481
V+ K + L+ + + G L AE L+
Sbjct: 406 VHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLL 442
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
CG + AR+LFD P+RD W A+I + EA++LF M + ++P + ++
Sbjct: 98 CGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASV 157
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+ CA+ L + +HG+I + + ++ TAL+++Y C L+ A F ++ E +A
Sbjct: 158 LSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNA 217
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SW I+ + G + A+++F +M+S G +P T + AC ++EGR
Sbjct: 218 ISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGR----- 272
Query: 448 MTEVYQIQPKLEHY----GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+ ++ EH+ ++D+ + G +D A+ L P ++ + + L S
Sbjct: 273 CIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCG 332
Query: 504 RI 505
RI
Sbjct: 333 RI 334
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/489 (39%), Positives = 289/489 (59%), Gaps = 6/489 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL-FDEMPDKDVVSWNVSISGHVK 166
+++H ++KTGL DT + ++ N L F + K+ WN I G +
Sbjct: 42 KQIHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 167 CMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
E A+ +F M ++ P T S A +L G+++H R I + LE
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKEGLEDDS 161
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+ N +L MY CGCL EA LF M +V+ W S++ G CG +++A+ LFD P R
Sbjct: 162 FIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQR 221
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ V W +MI+G+V+ RF +A+ +FREMQ +KPD F +V+LL CA LGA EQG+WIH
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
YI NR ++++V TALI+MY KCG E+ L++F K + W S+I GLA NG
Sbjct: 282 KYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMILGLANNGCEE 341
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+A++LF ++ G +PD ++FIGVL+AC+H G V + FF M E Y I+P ++HY C+
Sbjct: 342 RAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCM 401
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+++LG AGLLDEAE LI+K+P E + II + +LL+ACR GNV+M ++ A L+ ++
Sbjct: 402 VNVLGGAGLLDEAEALIKKMPVEGDTII---WSSLLAACRKNGNVEMAKRAANCLKNLDP 458
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
++ + L++N YAS +E+ R MKE + K GCSSIE++ +HEF+ H
Sbjct: 459 DETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFVSCGKKHP 518
Query: 585 EMKEIYSML 593
+ EIYS+L
Sbjct: 519 KSTEIYSLL 527
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 210/443 (47%), Gaps = 71/443 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFC-THPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
M +LKQI A + + GL + ++++ FC PS N YA +F I +N +
Sbjct: 38 MRELKQIHANLIKTGLISDTVAASRVLAFCCASPSDRN--YAYLVFTRINHKNPFVWNTI 95
Query: 60 IKAFAKKGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
I+ F++ ++ +F + V P TYP VFKA LG + G ++HG V+K
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKE 155
Query: 118 GLEFDTYVCNSIMDMY---GVL----------------------------GKICNVKKLF 146
GLE D+++ N+++ MY G L G I +KLF
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQAQKLF 215
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
DEMP ++ VSWN ISG V+ RF+DA+++FR M++ ++ PD T+VS L+AC L
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQER-DVKPDGFTMVSLLNACAYLGAS 274
Query: 207 ELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
E G+ IH+YI E I+ AL+DMYCKCGC E ++F+ P K + CW SM+ G
Sbjct: 275 EQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMILGL 334
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
N G E+A D LF E++ L+PD +
Sbjct: 335 ANNGCEERAMD-------------------------------LFLELERTGLEPDSVSFI 363
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELR- 383
+LT CA G + + + E + ++ T ++ + GL+++A + ++
Sbjct: 364 GVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPV 423
Query: 384 EKDAASWTSIICGLAMNGKINKA 406
E D W+S++ NG + A
Sbjct: 424 EGDTIIWSSLLAACRKNGNVEMA 446
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 10/283 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A+K+F + +++N +I F + G F+ +L +F +++ER V PD FT + A +
Sbjct: 211 AQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAY 270
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
LG ++G +H Y+V+ E ++ V +++DMY G K+F+ P K + WN
Sbjct: 271 LGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSM 330
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I G E A+D+F + + L PD + + L+AC + E R + ++
Sbjct: 331 ILGLANNGCEERAMDLFLELERT-GLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKY 389
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE---KA 274
P + + ++++ G L EA L +MP + I W+S+++ G +E +A
Sbjct: 390 MIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMAKRA 449
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA---LFREMQI 314
+ + + M N Y + F+EAV L +E Q+
Sbjct: 450 ANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQM 492
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 315/572 (55%), Gaps = 42/572 (7%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER---GVSPDNFTYPF 93
+L A K F + L+ +N LI +++ G R +L ++ + + G+ PD T+
Sbjct: 109 DLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSS 168
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD 153
A +G++ +G ++ V +G D+ V N++++MY G + + +K+FD + ++D
Sbjct: 169 ALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRD 228
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
V++WN ISG+ K A+++F+RM + P+ T + L+ACT L++LE G+ IH
Sbjct: 229 VIAWNTMISGYAKQGAATQALELFQRMGPN-DPKPNVVTFIGLLTACTNLEDLEQGRAIH 287
Query: 214 RYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
R + + E ++GN LL+MY KC LE
Sbjct: 288 RKVKEHGYESDLVIGNVLLNMYTKCS------------------------------SSLE 317
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+AR +F+R RD++ W +I YVQ+ + +A+ +F++MQ+ + P++ L +L+ CA
Sbjct: 318 EARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACA 377
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
LGA QGK +H I R D V+ +L+ MY +CG ++ + +F +R+K SW++
Sbjct: 378 VLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWST 437
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
+I A +G LE F +++ G DD+T + LSACSHGG++ EG + F +M +
Sbjct: 438 LIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDH 497
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
+ P H+ C++DLL RAG L+ AE LI +P + + + +LLS C+++ +
Sbjct: 498 GLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA---WTSLLSGCKLHNDTKRA 554
Query: 513 EKLAALLEKIESKDS-SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
++A L ++ES+D S TLL+N+YA A RW+DV R + RK PGCS IEIN
Sbjct: 555 ARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR---RAARKNPGCSYIEIND 611
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+HEF+ GD SH E + I + + R++K + D+
Sbjct: 612 TVHEFVAGDKSHPEEELIAAEIKRLSKQMKDA 643
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 220/446 (49%), Gaps = 37/446 (8%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F +I+ P +++ L++ AFA+ G +R++L + ++ G+ PD +
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAI 65
Query: 96 KAVGWLGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
++K+G+ +H +++T LEFD + +++ MY + +K FDEM K +
Sbjct: 66 GVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTL 125
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRM--RQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
V+WN I+G+ + A+ +++ M + + PD T S L AC+ + ++ G+EI
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREI 185
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
R + I+ NAL++MY KCG L AR++FD + N++VI W +M+SGY G
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAA 245
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+A +LF R D KP+ + LLT C
Sbjct: 246 TQALELFQRMGPNDP-------------------------------KPNVVTFIGLLTAC 274
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC-GLIEKALEIFYELREKDAASW 390
L LEQG+ IH + E+ D V+ L+ MY KC +E+A ++F LR +D +W
Sbjct: 275 TNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITW 334
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+I G+ AL++F QM P++IT VLSAC+ G +G+ + +
Sbjct: 335 NILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA-VHALIA 393
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDE 476
+ + + L+++ R G LD+
Sbjct: 394 SGRCKADVVLENSLMNMYNRCGSLDD 419
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 210/466 (45%), Gaps = 79/466 (16%)
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDE 190
MYG G + + +F + + VSW + ++ + + +A+ +RRM +G L PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG--LRPDG 58
Query: 191 GTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
V + C++ K+L+ G+ +H I Q LEF I+G AL+ MY +C L AR+ FD
Sbjct: 59 AMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFD 118
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKA----RDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
EM K ++ W ++++GY G A +D+ +SP
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPE--------------------- 157
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
+KPD + L C+ +G + QG+ I + D++V ALI
Sbjct: 158 -----------GMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALIN 206
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY+KCG +E A ++F L+ +D +W ++I G A G +ALELF +M KP+ +T
Sbjct: 207 MYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVT 266
Query: 425 FIGVLSACSHGGLVDEGRRFF--------------------------NTMTEVYQIQPKL 458
FIG+L+AC++ +++GR +++ E Q+ +L
Sbjct: 267 FIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERL 326
Query: 459 E-----HYGCLIDLLGRAGLLDEAEELIRKIPNEN---NEIIVPLYGALLSACRIYGNVD 510
+ LI + G +A ++ +++ EN NEI + +LSAC + G
Sbjct: 327 RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL---SNVLSACAVLGAKR 383
Query: 511 MGEKLAALLEKIESK-DSSFHTLLANIYASANRWEDVTNVRQKMKE 555
G+ + AL+ K D L N+Y +D V +++
Sbjct: 384 QGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 220/450 (48%), Gaps = 38/450 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
++Q ++I+A+ G + N L+ + G+L A K+F +++ ++A+N +I
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINM--YSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AK+G+ ++L LF ++ P+ T+ + A L ++++G +H V + G E
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYE 296
Query: 121 FDTYVCNSIMDMYG-VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D + N +++MY + +++F+ + +DV++WN+ I +V+ + +DA+D+F++
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M Q N+ P+E T+ + LSAC L GK +H I + + ++ N+L++MY +CG
Sbjct: 357 M-QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCG 415
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L + +F + +K+++ W+++++ Y G + F W + G
Sbjct: 416 SLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHF----------WELLQEG--- 462
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAV 357
L D +V+ L+ C+ G L++G + + ++ + D
Sbjct: 463 ------------------LAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYR 504
Query: 358 VATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISG 416
++++ ++ G +E A + +++ DA +WTS++ G ++ +A + ++
Sbjct: 505 HFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL 564
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
++ + T + + + G D+ R+ N
Sbjct: 565 ESEDEHSTVTLLSNVYAEAGRWDDVRKTRN 594
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/609 (33%), Positives = 320/609 (52%), Gaps = 40/609 (6%)
Query: 17 QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLF 76
++N T N L+ + G L A +F + +++ ++I + G F ++ F
Sbjct: 278 RRNAFTWNSLLSL--YAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTF 335
Query: 77 SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL 136
+ G +P FT V + + G KVH +VVK GL V NS++ MYG
Sbjct: 336 LDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKC 395
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR------------------ 178
G + +F+ M + V SWNV +S + R E AV +F
Sbjct: 396 GDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYN 455
Query: 179 -------------RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
RM ++ PD TV S LSAC L+ L++GK++H YI + +
Sbjct: 456 QNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSS 515
Query: 225 IMGNALLDMYCKCGCLSEARELFDE--MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ Y K G + AR + D+ + + NVI +T+++ GYV G ++AR++FD
Sbjct: 516 QIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMN 575
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RD++ WTAMI GY Q + DEA+ LFR M +I +P+ L A+L+ CA L L+ GK
Sbjct: 576 NRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQ 635
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNG 401
IH + V+ A+I +YA+ G + A +F ++ K+ +WTS+I +A +G
Sbjct: 636 IHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHG 695
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+A+ LF +M+ G KPD IT++GVLSAC+H G VD+G+R++ M + I P++ HY
Sbjct: 696 LGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHY 755
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++DL RAGLL EA E I+++P + ++ +G+LL+ACR+ N D+ E A L
Sbjct: 756 ACMVDLHARAGLLTEAHEFIQRMPVAPDTVV---WGSLLAACRVRKNADLAELAAGKLLS 812
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
I+ +S ++ LAN+Y++ RW D + + K+ GV+K G S + G +H F D
Sbjct: 813 IDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDV 872
Query: 582 SHSEMKEIY 590
H + IY
Sbjct: 873 LHPQRDSIY 881
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 222/488 (45%), Gaps = 80/488 (16%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNS-------------------------------------I 129
G +H + VK GL TY+CN+ +
Sbjct: 228 GRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNSL 287
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+ +Y G++ + +F EMPD+D VSW + I G + RF DAV F M P
Sbjct: 288 LSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSE-GFAPS 346
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFD 248
+ T+ + LS+C A++ +G+++H ++ + L + N++L MY KCG AR +F+
Sbjct: 347 QFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 406
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
M ++V W MVS Y + G++E A +F+ R IV W +I GY Q A+
Sbjct: 407 RMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKF 466
Query: 309 F-REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-------------------- 347
F R + ++PD F + ++L+ CA L L+ GK +H YI
Sbjct: 467 FSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYA 526
Query: 348 ------NENRITVDAVVA-------TALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
RI AVVA TAL+E Y K G ++A EIF + +D +WT++I
Sbjct: 527 KSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMI 586
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
G NG+ ++A+ELF MI G +P+ T VLSAC+ +D G++ Q
Sbjct: 587 VGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQE 646
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
Q + +I + R+G + A + +I I + +++ A +G +GE+
Sbjct: 647 Q-SVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT---WTSMIVAMAQHG---LGEQ 699
Query: 515 LAALLEKI 522
L E++
Sbjct: 700 AVVLFEEM 707
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 132/289 (45%), Gaps = 39/289 (13%)
Query: 197 LSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG----CLSEARELFDEMP 251
L C N G+ IH + + L + + N LL Y G C EAR LFD++P
Sbjct: 216 LQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIP 275
Query: 252 --NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
+N W S++S Y G+L A +F P RD V WT MI G + RF +AV F
Sbjct: 276 YARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTF 335
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
+M P +F L +L+ CA + A G+ +H ++ + ++ VA +++ MY KC
Sbjct: 336 LDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKC 395
Query: 370 GLIEKALEIFYELR-------------------------------EKDAASWTSIICGLA 398
G E A +F ++ E+ SW +II G
Sbjct: 396 GDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYN 455
Query: 399 MNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFN 446
NG AL+ FS+M+S + +PD T VLSAC++ ++ G++ +
Sbjct: 456 QNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHS 504
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 326/570 (57%), Gaps = 40/570 (7%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A K+F + L+ + L+I FA+ G R ++ LF + G PD FTY V
Sbjct: 179 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 238
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG---VLGKICNVKKLFDEMPDK 152
A LG + G+++H V++ GL D V S++DMY G + + +K+F++MP+
Sbjct: 239 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 298
Query: 153 DVVSWNVSISGHVKCMRFE-DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+V+SW I+ +V+ + +A+++F +M G ++ P+ + S L AC L + G++
Sbjct: 299 NVMSWTAIITAYVQSGECDKEAIELFCKMISG-HIRPNHFSFSSVLKACGNLSDPYTGEQ 357
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
++ Y + + +GN+L+ MY + G +
Sbjct: 358 VYSYAVKLGIASVNCVGNSLISMYARSG-------------------------------R 386
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+E AR FD +++V + A+++GY + + +EA LF E+ + F +LL+G
Sbjct: 387 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 446
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
A +GA+ +G+ IHG + + + + ALI MY++CG IE A ++F E+ +++ SW
Sbjct: 447 AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 506
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
TS+I G A +G +ALE+F +M+ G KP++IT++ VLSACSH G++ EG++ FN+M +
Sbjct: 507 TSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 566
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
+ I P++EHY C++DLLGR+GLL EA E I +P + ++ + LL ACR++GN +
Sbjct: 567 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV---WRTLLGACRVHGNTE 623
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+G A ++ + E D + + LL+N++ASA +W+DV +R+ MKE + K GCS IE+
Sbjct: 624 LGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVE 683
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+H F VG+ SH + +IY LD++A +
Sbjct: 684 NRVHRFHVGETSHPQAWQIYQELDQLASKI 713
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 150/547 (27%), Positives = 249/547 (45%), Gaps = 70/547 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIF-GSIQSPCLLAYNLLIKAF 63
K + ++ Q GL+ + LN L+ + G+ A IF G L++++ ++ F
Sbjct: 46 KLVHRKLMQSGLELDSVVLNTLISL--YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCF 103
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFD 122
A +++ F + E G P+ + + V +A GE ++G+VVKTG LE D
Sbjct: 104 ANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEAD 163
Query: 123 TYVCNSIMDMY-GVLGKICNVKKLFDEMPDKDVVSWNVSIS--GHVKCMRFEDAVDVFRR 179
V ++DM+ G + + K+FD+MP++++V+W + I+ + C R DA+D+F
Sbjct: 164 VCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCAR--DAIDLFLD 221
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
M +PD T S LSACT L L LGK++H R I L +G +L+DMY KC
Sbjct: 222 MELS-GYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCA 280
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
G ++ +R +F++ P +++ WTA+I YVQ
Sbjct: 281 AD----------------------------GSVDDSRKVFEQMPEHNVMSWTAIITAYVQ 312
Query: 299 FNRFD-EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
D EA+ LF +M ++P+ F ++L C L G+ ++ Y + I
Sbjct: 313 SGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC 372
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V +LI MYA+ G +E A + F L EK+ S+ +I+ G A N K +A LF+++ G
Sbjct: 373 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 432
Query: 418 AKPDDITFIGVLSACS-----------HGGLVDEGRR----FFNTMTEVY---------- 452
TF +LS + HG L+ G + N + +Y
Sbjct: 433 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 492
Query: 453 QIQPKLE-----HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
Q+ ++E + +I + G A E+ K+ + Y A+LSAC G
Sbjct: 493 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 552
Query: 508 NVDMGEK 514
+ G+K
Sbjct: 553 MISEGQK 559
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 199/424 (46%), Gaps = 47/424 (11%)
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G + + ++ PD TY + K+ + G+ VH ++++GLE D+ V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N+++ +Y G + +F+ M +K D+VSW+ +S A+ F M +
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE-LG 123
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEA 243
P+E + + AC+ +G+ I+ ++ + LE +G L+DM+ K
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK------- 176
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
G L A +FD+ P R++V WT MI + Q
Sbjct: 177 -----------------------GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCAR 213
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
+A+ LF +M++ PD+F ++L+ C +LG L GK +H + + +D V +L+
Sbjct: 214 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLV 273
Query: 364 EMYAKC---GLIEKALEIFYELREKDAASWTSIICGLAMNGKINK-ALELFSQMISGGAK 419
+MYAKC G ++ + ++F ++ E + SWT+II +G+ +K A+ELF +MISG +
Sbjct: 274 DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 333
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC----LIDLLGRAGLLD 475
P+ +F VL AC G L D + Y ++ + C LI + R+G ++
Sbjct: 334 PNHFSFSSVLKAC--GNLSDP---YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRME 388
Query: 476 EAEE 479
+A +
Sbjct: 389 DARK 392
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/601 (33%), Positives = 325/601 (54%), Gaps = 46/601 (7%)
Query: 5 KQIQAQIFQIGLQQNPET---LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
KQ+ + + + G+ + T L L V C G++ A IF ++ +NL++
Sbjct: 265 KQLHSYLLKAGMSFDYITEGSLLDLYVKC-----GDIETAHDIFNLGDRTNVVLWNLMLV 319
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A+ + KS +F +++ G+ P+ FTYP + + G+++ GE++H +K G E
Sbjct: 320 AYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFES 379
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D YV ++DMY + +K+ + + +DVVSW I+G+V+ E+A+ F+ M
Sbjct: 380 DMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM- 438
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
Q C + PD + S SAC +K + G +IH + + G A
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY-------VSGYA------------ 479
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
++ W ++V+ Y CG+ E+A LF +D + W +I+G+ Q
Sbjct: 480 -----------ADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+++A+ +F +M K + F ++ ++ A L ++QGK +HG + T + VA A
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI +Y KCG IE A IF E+ ++ SW +II + +G+ +AL+LF QM G KP+
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
D+TFIGVL+ACSH GLV+EG +F +M+ VY + P +HY C++D+LGRAG LD A +
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFV 708
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
++P N +I + LLSAC+++ N+++GE A L ++E DS+ + LL+N YA
Sbjct: 709 DEMPITANAMI---WRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTG 765
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML----DRMA 597
+W + VR+ MK+ G+RK PG S IE+ +H F VGD H +IY L DR++
Sbjct: 766 KWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLS 825
Query: 598 K 598
K
Sbjct: 826 K 826
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 258/539 (47%), Gaps = 46/539 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
Q + I AQ+++ N L+ + G+ AE++F + + +N LI
Sbjct: 160 FAQGRMIHAQVYKQAFCSETFVGNALIAL--YLGFGSFKLAERVFCDMLFCDRVTFNTLI 217
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A+ G +L +F +++ G+ PD T + A +G+++KG+++H Y++K G+
Sbjct: 218 SGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMS 277
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
FD S++D+Y G I +F+ +VV WN+ + + + + ++F +M
Sbjct: 278 FDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM 337
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
Q + P++ T L CT +ELG++IH I E + L+DMY K C
Sbjct: 338 -QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRC 396
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L +AR++ + LEK RD+V WT+MI GYVQ
Sbjct: 397 LDKARKILE---------------------MLEK----------RDVVSWTSMIAGYVQH 425
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ +EA+A F+EMQ + PD L + + CA + A+ QG IH + + D +
Sbjct: 426 DFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIW 485
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
L+ +YA+CG E+A +F E+ KD +W +I G + +AL +F +M GAK
Sbjct: 486 NTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAK 545
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
+ TFI +SA ++ + +G++ + + E LI L G+ G +++A+
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTGHTS-ETEVANALISLYGKCGSIEDAKM 604
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGN----VDMGEKLAALLEKIESKDSSFHTLLA 534
+ ++ + NE+ + ++++C +G +D+ +++ E ++ D +F +LA
Sbjct: 605 IFSEM-SLRNEVS---WNTIITSCSQHGRGLEALDLFDQMKQ--EGLKPNDVTFIGVLA 657
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 139/521 (26%), Positives = 231/521 (44%), Gaps = 78/521 (14%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLR---------------ERGVSPDNFTY---------- 91
NLLI +AK G ++ +F +L +RG+ + F
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 92 --PFVFKAVGWLGEVKKGE------KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
P+V +V L KG+ +H V K +T+V N+++ +Y G +
Sbjct: 142 PTPYVLSSV--LSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAE 199
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++F +M D V++N ISGH +C E A+ +F M Q L PD TV S L+AC ++
Sbjct: 200 RVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEM-QLSGLRPDCVTVASLLAACASV 258
Query: 204 KNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
+L+ GK++H Y + + F I +LLD+Y KCG + A ++F+ NV+ W M+
Sbjct: 259 GDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLML 318
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
Y L K+ ++F +MQ + P+KF
Sbjct: 319 VAYGQISDLAKSFEIFG-------------------------------QMQATGIHPNKF 347
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+L C G +E G+ IH +N D V+ LI+MY+K ++KA +I L
Sbjct: 348 TYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEML 407
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
++D SWTS+I G + +AL F +M G PD+I SAC+ + +G
Sbjct: 408 EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
+ + V + + L++L R G +EA L R+I + +EI + L+S
Sbjct: 468 Q-IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI-DHKDEIT---WNGLISG 522
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFH--TLLANIYASAN 541
+G + E+ + K+ + ++ T ++ I A AN
Sbjct: 523 ---FGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALAN 560
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 179/381 (46%), Gaps = 34/381 (8%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H V GL D + N ++D+Y G + +++F E+ +D VSW +SG+ +
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMG 227
++A ++ +M ++P + S LSACT K G+ IH + Q +G
Sbjct: 124 LGKEAFRLYSQMHWTA-VIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NAL+ +Y G A +F +M + + + +++SG+ CG E A +FD
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFD-------- 234
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
EMQ+ L+PD + +LL CA +G L++GK +H Y+
Sbjct: 235 -----------------------EMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL 271
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ ++ D + +L+++Y KCG IE A +IF + W ++ + K+
Sbjct: 272 LKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSF 331
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
E+F QM + G P+ T+ +L C+ G ++ G + ++++ + + G LID+
Sbjct: 332 EIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDM 390
Query: 468 LGRAGLLDEAEELIRKIPNEN 488
+ LD+A +++ + +
Sbjct: 391 YSKYRCLDKARKILEMLEKRD 411
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 151/305 (49%), Gaps = 13/305 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M Q QI A+++ G + N L+ + G A +F I + +N LI
Sbjct: 463 MRQGLQIHARVYVSGYAADISIWNTLVNL--YARCGRSEEAFSLFREIDHKDEITWNGLI 520
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F + + ++L++F K+ + G + FT+ A+ L ++K+G++VHG VKTG
Sbjct: 521 SGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHT 580
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+T V N+++ +YG G I + K +F EM ++ VSWN I+ + R +A+D+F +M
Sbjct: 581 SETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQM 640
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCG 238
+Q L P++ T + L+AC+ + +E G + ++ PI + ++D+ + G
Sbjct: 641 KQE-GLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAG 699
Query: 239 CLSEARELFDEMP-NKNVICWTSMVSG-----YVNCGQLEKARDLFDRSPVRDIVLWTAM 292
L AR DEMP N + W +++S + G+L A+ L + P D + +
Sbjct: 700 QLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGEL-AAKHLLELEP-HDSASYVLL 757
Query: 293 INGYV 297
N Y
Sbjct: 758 SNAYA 762
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 183/417 (43%), Gaps = 73/417 (17%)
Query: 196 TLSACTALKN-LELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
L AC N L EIH + + L ++GN L+D+Y K G + +AR++F E+ ++
Sbjct: 48 ALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR 107
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+ + W +M+SGY G ++A L+ + + WTA+I
Sbjct: 108 DHVSWVAMLSGYAQRGLGKEAFRLYSQ------MHWTAVI-------------------- 141
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
P ++L ++L+ C + QG+ IH + + + V ALI +Y G +
Sbjct: 142 -----PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A +F ++ D ++ ++I G A G AL++F +M G +PD +T +L+AC+
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACA 256
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
G + +G++ + + + + G L+DL + G ++ A ++ + + N ++
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSFDYITE-GSLLDLYVKCGDIETAHDIF-NLGDRTNVVLW 314
Query: 494 PL--------------------------------YGALLSACRIYGNVDMGEKLAALLEK 521
L Y +L C G +++GE++ +L K
Sbjct: 315 NLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIK 374
Query: 522 --IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
ES D +L ++Y+ ++ + R+ ++ + R V +S+ + H+F
Sbjct: 375 NGFES-DMYVSGVLIDMYS---KYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 326/570 (57%), Gaps = 40/570 (7%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A K+F + L+ + L+I FA+ G R ++ LF + G PD FTY V
Sbjct: 197 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 256
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG---VLGKICNVKKLFDEMPDK 152
A LG + G+++H V++ GL D V S++DMY G + + +K+F++MP+
Sbjct: 257 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 316
Query: 153 DVVSWNVSISGHVKCMRFE-DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+V+SW I+ +V+ + +A+++F +M G ++ P+ + S L AC L + G++
Sbjct: 317 NVMSWTAIITAYVQSGECDKEAIELFCKMISG-HIRPNHFSFSSVLKACGNLSDPYTGEQ 375
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
++ Y + + +GN+L+ MY + G +
Sbjct: 376 VYSYAVKLGIASVNCVGNSLISMYARSG-------------------------------R 404
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+E AR FD +++V + A+++GY + + +EA LF E+ + F +LL+G
Sbjct: 405 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 464
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
A +GA+ +G+ IHG + + + + ALI MY++CG IE A ++F E+ +++ SW
Sbjct: 465 AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 524
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
TS+I G A +G +ALE+F +M+ G KP++IT++ VLSACSH G++ EG++ FN+M +
Sbjct: 525 TSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 584
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
+ I P++EHY C++DLLGR+GLL EA E I +P + ++ + LL ACR++GN +
Sbjct: 585 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV---WRTLLGACRVHGNTE 641
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+G A ++ + E D + + LL+N++ASA +W+DV +R+ MKE + K GCS IE+
Sbjct: 642 LGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVE 701
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+H F VG+ SH + +IY LD++A +
Sbjct: 702 NRVHRFHVGETSHPQAWQIYQELDQLASKI 731
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 150/547 (27%), Positives = 249/547 (45%), Gaps = 70/547 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIF-GSIQSPCLLAYNLLIKAF 63
K + ++ Q GL+ + LN L+ + G+ A IF G L++++ ++ F
Sbjct: 64 KLVHRKLMQSGLELDSVVLNTLISL--YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCF 121
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFD 122
A +++ F + E G P+ + + V +A GE ++G+VVKTG LE D
Sbjct: 122 ANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEAD 181
Query: 123 TYVCNSIMDMY-GVLGKICNVKKLFDEMPDKDVVSWNVSIS--GHVKCMRFEDAVDVFRR 179
V ++DM+ G + + K+FD+MP++++V+W + I+ + C R DA+D+F
Sbjct: 182 VCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCAR--DAIDLFLD 239
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
M +PD T S LSACT L L LGK++H R I L +G +L+DMY KC
Sbjct: 240 MELS-GYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCA 298
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
G ++ +R +F++ P +++ WTA+I YVQ
Sbjct: 299 AD----------------------------GSVDDSRKVFEQMPEHNVMSWTAIITAYVQ 330
Query: 299 FNRFD-EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
D EA+ LF +M ++P+ F ++L C L G+ ++ Y + I
Sbjct: 331 SGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC 390
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V +LI MYA+ G +E A + F L EK+ S+ +I+ G A N K +A LF+++ G
Sbjct: 391 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 450
Query: 418 AKPDDITFIGVLSACS-----------HGGLVDEGRR----FFNTMTEVY---------- 452
TF +LS + HG L+ G + N + +Y
Sbjct: 451 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 510
Query: 453 QIQPKLE-----HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
Q+ ++E + +I + G A E+ K+ + Y A+LSAC G
Sbjct: 511 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 570
Query: 508 NVDMGEK 514
+ G+K
Sbjct: 571 MISEGQK 577
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 199/424 (46%), Gaps = 47/424 (11%)
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G + + ++ PD TY + K+ + G+ VH ++++GLE D+ V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N+++ +Y G + +F+ M +K D+VSW+ +S A+ F M +
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE-LG 141
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEA 243
P+E + + AC+ +G+ I+ ++ + LE +G L+DM+ K
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK------- 194
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
G L A +FD+ P R++V WT MI + Q
Sbjct: 195 -----------------------GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCAR 231
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
+A+ LF +M++ PD+F ++L+ C +LG L GK +H + + +D V +L+
Sbjct: 232 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLV 291
Query: 364 EMYAKC---GLIEKALEIFYELREKDAASWTSIICGLAMNGKINK-ALELFSQMISGGAK 419
+MYAKC G ++ + ++F ++ E + SWT+II +G+ +K A+ELF +MISG +
Sbjct: 292 DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 351
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC----LIDLLGRAGLLD 475
P+ +F VL AC G L D + Y ++ + C LI + R+G ++
Sbjct: 352 PNHFSFSSVLKAC--GNLSDP---YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRME 406
Query: 476 EAEE 479
+A +
Sbjct: 407 DARK 410
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 293/494 (59%), Gaps = 11/494 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDM-YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+++ +++KTGL + + G I KLF MP+ ++ SWN I +
Sbjct: 45 HQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSR 104
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
+ A+ +F M + P T S A L + G ++H R + L+
Sbjct: 105 SSTPQFAISLFVDMLYS-QIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQF 163
Query: 226 MGNALLDMYCKCGCLSEARELFD----EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ N ++ MY G +SEAR +FD E+ + +V+ SM+ GY CG+++++R+LFD
Sbjct: 164 ICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDM 223
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
R V W +MI+GYV+ + EA+ LF +MQ+ + +F +V+LL CA LGAL+ GK
Sbjct: 224 ITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGK 283
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
W+H YI N ++ +V TA+I+MY KCG +E A+E+F + + W SII GLAMNG
Sbjct: 284 WVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNG 343
Query: 402 KINKALELFSQMISGG-AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
+A E FS++ S KPD ++FIGVL+AC H G +++ R +F M Y+I+P ++H
Sbjct: 344 HEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKH 403
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C++D+LG+AGLL+EAEELI+ +P + + II +G+LLS+CR + NV + + A +
Sbjct: 404 YTCIVDVLGQAGLLEEAEELIKGMPLKPDAII---WGSLLSSCRKHRNVQIARRAAQRVY 460
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++ D+S + L++N++A++N++E+ R MKE K PGCSSIE+ G +HEF+ G
Sbjct: 461 ELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGG 520
Query: 581 PSHSEMKEIYSMLD 594
H + +EIY +L+
Sbjct: 521 RLHPKTQEIYHLLN 534
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 208/433 (48%), Gaps = 72/433 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QI I + GL NP + + FC PS GN+ YA K+F + +P L ++N +I
Sbjct: 41 INHFHQIYPHIIKTGLTLNPIASTRALTFCASPS-GNINYAYKLFVRMPNPNLYSWNTII 99
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AF++ + + ++ LF + + P TYP VFKA LG G ++HG VVK GL+
Sbjct: 100 RAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQ 159
Query: 121 FDTYVCNSIMDMY---GVL--------------------------------GKICNVKKL 145
D ++CN+I+ MY G++ G+I + L
Sbjct: 160 NDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNL 219
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALK 204
FD+M + VSWN ISG+V+ + +A+++F +M+ +G + E T+VS L+AC L
Sbjct: 220 FDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEV--SEFTMVSLLNACAHLG 277
Query: 205 NLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
L+ GK +H YI + E I+ A++DMYCKCG + A E+F+ P + + CW S++
Sbjct: 278 ALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIII 337
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G G +A + F + + LKPD
Sbjct: 338 GLAMNGHEREAFEFFSKLESSKL------------------------------LKPDSVS 367
Query: 324 LVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+ +LT C LGA+ + + + +N+ I T ++++ + GL+E+A E+ +
Sbjct: 368 FIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGM 427
Query: 383 REK-DAASWTSII 394
K DA W S++
Sbjct: 428 PLKPDAIIWGSLL 440
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/425 (43%), Positives = 270/425 (63%), Gaps = 9/425 (2%)
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCK--CG 238
Q L PD + L A T +++ G+++H + I L + A + MY G
Sbjct: 70 QLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSG 129
Query: 239 CLSEARELFD--EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C+ +AR++FD M +V W +M++GY G L ARDLF+R P R+++ WTA+I GY
Sbjct: 130 CICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGY 189
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE-NRITVD 355
Q NR +A+ALFR MQ+ ++PD+ ++ LT CA+LGALE G+WI YI+ +T +
Sbjct: 190 AQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTN 249
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ ALI+MYAK G I+ AL++F + K +WT++I GLA++G +ALE+FS+M
Sbjct: 250 IPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMER 309
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
KP+DITFI +LSACSH GLV GR +FN M Y I+PK+EHYGC+IDLLGRAG L
Sbjct: 310 ARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLK 369
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA+ L+ ++P E N +I +G+LL+AC +G+ ++GE L ++E +S + LL+N
Sbjct: 370 EAQTLLAQMPFEPNAVI---WGSLLAACNTHGDPELGELALQHLLELEPDNSGNYALLSN 426
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYAS RW + VR+ M + GV+K+PG S IE+N +HEF+ G+ SHS+ I +L +
Sbjct: 427 IYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISHSQFDRIQEVLSK 486
Query: 596 MAKTL 600
+ + L
Sbjct: 487 INRQL 491
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 204/423 (48%), Gaps = 81/423 (19%)
Query: 23 LNKLMVFCTHPSHGNLLYAEKIFGSI-QSPCLLAYNLLIKAFAKKGSFRK-SLLLFSKLR 80
L++ + C+ S G YA +F SI +P + YN +IKA + + K S+ L++ ++
Sbjct: 13 LSRFIHACS--SLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKASIFLYNNIQ 70
Query: 81 ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK-- 138
G+ PD++++PF KAV ++ G ++H ++ GL D +V + + MY G
Sbjct: 71 LAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGC 130
Query: 139 ---------------------------------ICNVKKLFDEMPDKDVVSWNVSISGHV 165
+CN + LF+ MP ++V+SW I+G+
Sbjct: 131 ICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYA 190
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTP 224
+ R DA+ +FRRM Q N+ PDE ++ L+AC L LELG+ I YI++ L T
Sbjct: 191 QANRPHDAIALFRRM-QLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTN 249
Query: 225 I-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
I + NAL+DMY K G + A ++F+ M +K +I WT+M++G G +A ++F R
Sbjct: 250 IPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSR--- 306
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
M+ R+KP+ +A+L+ C+ +G ++ G+W
Sbjct: 307 ----------------------------MERARVKPNDITFIAILSACSHVGLVQTGRW- 337
Query: 344 HGYINE--NRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLA 398
Y N +R ++ + +I++ + G +++A + ++ E +A W S++
Sbjct: 338 --YFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACN 395
Query: 399 MNG 401
+G
Sbjct: 396 THG 398
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I+ I ++GL LN ++ + G++ A ++F ++ ++ + +I A
Sbjct: 236 IRHYIDRLGLLTTNIPLNNALI-DMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALH 294
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV-KTGLE--FDT 123
G ++L +FS++ V P++ T+ + A +G V+ G ++ + G+E +
Sbjct: 295 GLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEH 354
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMP-DKDVVSW 157
Y C ++D+ G G + + L +MP + + V W
Sbjct: 355 YGC--MIDLLGRAGHLKEAQTLLAQMPFEPNAVIW 387
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 296/497 (59%), Gaps = 8/497 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH-VK 166
++ H ++ T L N ++ + + KLFD++P D+ +N I H +
Sbjct: 33 KQTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS 91
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPI 225
+++ VFR + Q L P+ + V SAC ++ G+++ + + LE
Sbjct: 92 PHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVF 151
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ NAL+ MY K G + E++++F ++++ W ++++ YV G + A++LFD RD
Sbjct: 152 VVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERD 211
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+V W+ +I GYVQ F EA+ F +M I KP+++ LV+ L C+ L AL+QGKWIH
Sbjct: 212 VVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHA 271
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS-WTSIICGLAMNGKIN 404
YI + I ++ + ++I+MYAKCG IE A +F+E + K W ++I G AM+G N
Sbjct: 272 YIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPN 331
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+A+ +F QM P+ +TFI +L+ACSHG +V+EG+ +F M Y I P++EHYGC+
Sbjct: 332 EAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCM 391
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLL R+GLL EAE++I +P + V ++GALL+ACRIY +++ G ++ +++ ++
Sbjct: 392 VDLLSRSGLLKEAEDMISSMPMAPD---VAIWGALLNACRIYKDMERGYRIGRIIKGMDP 448
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMK-EMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
H LL+NIY+++ RW + +R+K + +K+PGCSSIE+ G H+FLVGD SH
Sbjct: 449 NHIGCHVLLSNIYSTSGRWNEARILREKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSH 508
Query: 584 SEMKEIYSMLDRMAKTL 600
+ +EIYS LD M L
Sbjct: 509 PQSREIYSFLDEMTTKL 525
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 208/431 (48%), Gaps = 72/431 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M Q+KQ AQ+ L +P + NKL+ S L YA K+F I P L YN +I
Sbjct: 29 MQQIKQTHAQLITTALISHPVSANKLLKLAACAS---LSYAHKLFDQIPQPDLFIYNTMI 85
Query: 61 KAFA-KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
KA + S SL++F L ++ G+ P+ +++ F F A G V++GE+V + VK G
Sbjct: 86 KAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVG 145
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN-------------------- 158
LE + +V N+++ MYG G + +K+F D+D+ SWN
Sbjct: 146 LENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFD 205
Query: 159 -----------VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
I+G+V+ F +A+D F +M Q P+E T+VS L+AC+ L L+
Sbjct: 206 GMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQ-IGPKPNEYTLVSALAACSNLVALD 264
Query: 208 LGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCL-SEARELFDEMPNKNVICWTSMVSGY 265
GK IH YI + E++ + +++DMY KCG + S +R F+ + V W +M+ G+
Sbjct: 265 QGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGF 324
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G +EA+ +F +M++ ++ P+K +
Sbjct: 325 AMHGMP-------------------------------NEAINVFEQMKVEKISPNKVTFI 353
Query: 326 ALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-R 383
ALL C+ +E+GK + +++ IT + ++++ ++ GL+++A ++ +
Sbjct: 354 ALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPM 413
Query: 384 EKDAASWTSII 394
D A W +++
Sbjct: 414 APDVAIWGALL 424
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 132/259 (50%), Gaps = 7/259 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++FQ + ++ + N L+ + GN+ A+++F ++ +++++ +I + + G F
Sbjct: 171 KVFQWAVDRDLYSWNTLIA--AYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCF 228
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
++L F K+ + G P+ +T A L + +G+ +H Y+ K ++ + + SI
Sbjct: 229 MEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASI 288
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVS-WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
+DMY G+I + ++F E K V WN I G +A++VF +M+ + P
Sbjct: 289 IDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVE-KISP 347
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEAREL 246
++ T ++ L+AC+ +E GK R + + TP + + ++D+ + G L EA ++
Sbjct: 348 NKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDM 407
Query: 247 FDEMP-NKNVICWTSMVSG 264
MP +V W ++++
Sbjct: 408 ISSMPMAPDVAIWGALLNA 426
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 284/464 (61%), Gaps = 8/464 (1%)
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
N+ F+ +V W S++ + + + +A F RMR + P+ T ++ LSAC
Sbjct: 44 NISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLA-GVEPNHITFITLLSAC 102
Query: 201 TAL--KNLELGKEIHRYI-NQELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVI 256
++ +H Y L+ +M G AL+DMY KC L AR++F + KN +
Sbjct: 103 ADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSV 162
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
W +M++G++ G++E A LFD P RD + WTA+ING ++ ++A+ F +MQ
Sbjct: 163 SWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSG 222
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+ D ++A+L CA LGAL G W+H ++ + ++ +LI+MY++CG IE A
Sbjct: 223 VAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFAR 282
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F ++ ++ SW SII G A+NG +++LE F M G KPD +++ G L+ACSH G
Sbjct: 283 QVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAG 342
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LV++G F+ M V++I P++EHYGC++DL GRAG L++A +I ++P + NE+++
Sbjct: 343 LVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVL--- 399
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
G+LL+ACR +G+V++ E+L L K++ + +++ LL+NIYA+ +W+ NVR+ MK
Sbjct: 400 GSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKAR 459
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
GV+K PG SS+EI+G +HEF+ GD H++ IYSMLD + L
Sbjct: 460 GVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHEL 503
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 185/434 (42%), Gaps = 74/434 (17%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
NP LN F P+ + + K + P +L + L + + + G ++ F+
Sbjct: 27 SNPTKLN----FPRSPNSPHRNISSKFNPNSVDPIVLWTSSLAR-YCRNGQLSEAAAEFT 81
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKK--GEKVHGYVVKTGLEF-DTYVCNSIMDMYG 134
++R GV P++ T+ + A +HGY K GL+ V +++DMY
Sbjct: 82 RMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYS 141
Query: 135 VLGKICNVKK-------------------------------LFDEMPDKDVVSWNVSISG 163
++ + +K LFDEMP +D +SW I+G
Sbjct: 142 KCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALING 201
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEF 222
+K E A++ F +M Q + D ++++ L+AC L L LG +HR++ QE +
Sbjct: 202 LLKHGYSEQALECFHQM-QRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKD 260
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ N+L+DMY +CGC+ AR++F +M + ++ W S++ G+
Sbjct: 261 NIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFA---------------- 304
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+NG+ DE++ F MQ KPD LT C+ G + +G
Sbjct: 305 ----------VNGFA-----DESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLE 349
Query: 343 IHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMN 400
+ + ++IT ++++Y + G +E AL + E+ K + S++ +
Sbjct: 350 LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTH 409
Query: 401 GKINKALELFSQMI 414
G +N A L +
Sbjct: 410 GDVNLAERLMKHLF 423
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 137/294 (46%), Gaps = 11/294 (3%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G + A ++F + + +++ LI K G ++L F +++ GV+ D + V
Sbjct: 174 NGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAV 233
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + G VH +V+ + + + NS++DMY G I +++F +M + +
Sbjct: 234 LAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTL 293
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSWN I G +++++ F M Q PD + L+AC+ + G E+
Sbjct: 294 VSWNSIIVGFAVNGFADESLEFFXAM-QKEGFKPDGVSYTGALTACSHAGLVNKGLELFD 352
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQL 271
+ + TP + + ++D+Y + G L +A + +EMP K N + S+++ G +
Sbjct: 353 NMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDV 412
Query: 272 EKA----RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI--IRLKP 319
A + LF P D + + N Y ++D A + R M+ ++ KP
Sbjct: 413 NLAERLMKHLFKLDPEGD-AYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKP 465
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 317/542 (58%), Gaps = 38/542 (7%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+ ++ +A+ G K++ F + +GV + +T+P + A + GE+VHG++V
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K+G + YV ++++DMY G + N K + + M D DVVSWN + G V+ E+A+
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMY 234
+F+ M G N+ D+ T S L+ C + ++ K +H I + E ++ NAL+DMY
Sbjct: 353 LFKNM-HGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMY 409
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
K G + A +F++M LEK D++ WT+++
Sbjct: 410 AKTGDMDCAYTVFEKM--------------------LEK-----------DVISWTSLVT 438
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY Q N +E++ +F +M++ + PD+FI+ ++L+ CA+L LE GK +H ++ +
Sbjct: 439 GYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRW 498
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
V +L+ MYAKCG ++ A IF ++ KD +WT+II G A NGK +L+ + M+
Sbjct: 499 SQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMV 558
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
S G +PD ITFIG+L ACSH GLVDEGR++F M +VY I+P EHY C+IDL GR+G L
Sbjct: 559 SSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKL 618
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
DEA++L+ ++ + + + + +LLSACR++ N+++ E+ A L ++E ++ + +L+
Sbjct: 619 DEAKQLLDQMDVKPDATV---WKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLS 675
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
N+Y+++ +W DV +R+ MK G+ K PGCS +EIN ++ F+ D H EIY+ +D
Sbjct: 676 NMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKID 735
Query: 595 RM 596
+
Sbjct: 736 EI 737
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 177/396 (44%), Gaps = 71/396 (17%)
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA---------- 173
Y N +++ G++ + +KLFD+MP KD SWN IS +V R +A
Sbjct: 66 YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCK 125
Query: 174 ---------------------VDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKE 211
D+FR MR +G + T+ S L C++L ++ G+
Sbjct: 126 SSITWSSIISGYCKFGCKVEAFDLFRSMRLEG--WKASQFTLGSVLRVCSSLGLIQTGEM 183
Query: 212 IHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH ++ + E + L+DMY KC C+SEA LF +
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE------------------- 224
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
FDR ++ VLWTAM+ GY Q +AV FR M ++ +++ +LT
Sbjct: 225 -------FDR---KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTA 274
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C+ + A G+ +HG+I ++ + V +AL++MYAKCG ++ A + + + D SW
Sbjct: 275 CSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSW 334
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR--FFNTM 448
S++ G +G +AL LF M K DD TF VL+ C G + + T
Sbjct: 335 NSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTG 394
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
E Y++ L+D+ + G +D A + K+
Sbjct: 395 FENYKLVSN-----ALVDMYAKTGDMDCAYTVFEKM 425
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 179/361 (49%), Gaps = 48/361 (13%)
Query: 184 CNLMP------DEGTVVSTLSACTALKNLELG----------KEIHRYINQELEFTPIMG 227
CNL+P DE TV + + K L + IH E +
Sbjct: 10 CNLLPWLNKITDERTVQQVIMHKFSSKVLSFPHNPCKFMAFLRSIHTTTAASYE-SIYQT 68
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N LL+ K G +++AR+LFD+MP K+ W +M+S YVN G+L +AR+LFD + +
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W+++I+GY +F EA LFR M++ K +F L ++L C+ LG ++ G+ IHG++
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIF--YELREKDAASWTSIICGLAMNGKINK 405
+N + V T L++MYAKC + +A +F E K+ WT+++ G A NG K
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 248
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACS-----------HGGLVDEGRRFFNTMTEVYQI 454
A+E F M + G + + TF +L+ACS HG +V G F + V
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG---FGSNVYVQS- 304
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPL--YGALLSACRIYGN 508
L+D+ + G L A+ ++ + +++ N ++V +G A R++ N
Sbjct: 305 --------ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKN 356
Query: 509 V 509
+
Sbjct: 357 M 357
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 152/321 (47%), Gaps = 12/321 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K + I + G + N L+ + G++ A +F + ++++ L+ +A
Sbjct: 384 KSVHGLIIKTGFENYKLVSNALVDM--YAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYA 441
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ S +SL +F +R GV+PD F + A L ++ G++VH +K+GL +
Sbjct: 442 QNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS 501
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NS++ MY G + + +F M KDV++W I G+ + + +++ + M
Sbjct: 502 VYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSS- 560
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ--ELEFTPIMGNALLDMYCKCGCLSE 242
PD T + L AC+ ++ G++ + +N+ ++ P ++D++ + G L E
Sbjct: 561 GTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDE 620
Query: 243 ARELFDEMPNK-NVICWTSMVSGYVNCGQLE----KARDLFDRSPVRDI--VLWTAMING 295
A++L D+M K + W S++S LE A +LF+ P+ + V+ + M +
Sbjct: 621 AKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSA 680
Query: 296 YVQFNRFDEAVALFREMQIIR 316
++N + L + I++
Sbjct: 681 SRKWNDVAKIRKLMKSKGIVK 701
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 206/656 (31%), Positives = 344/656 (52%), Gaps = 81/656 (12%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H S G L A ++F I +P AYN LI+A++ G F ++ L+ + V+P+ +T+
Sbjct: 44 HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTF 103
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
PFV KA L +++ G +H + GL D +V +++D+Y + + +F +MP
Sbjct: 104 PFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPM 163
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+DVV+WN ++G+ + A+ M+ L P+ T+VS L L G
Sbjct: 164 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Query: 212 IHRYIN----QELEFTPIMGNALLDMY--CK----------------------------- 236
IH Y ++ E ++G ALLDMY CK
Sbjct: 224 IHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVL 283
Query: 237 CGCLSEARELFDEM----------------------------------------PNKNVI 256
C ++EA LF +M + ++
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT 343
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
S++S Y G + +A FD V+D + + A+++G VQ + +EA +F++MQ
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
++PD +V+L+ C+ L AL+ GK HG + + ++ + +LI+MYAKCG I+ +
Sbjct: 404 MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSR 463
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F ++ +D SW ++I G ++G +A LF M + G PDD+TFI +++ACSH G
Sbjct: 464 QVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LV EG+ +F+TMT Y I P++EHY C++DLL R GLLDEA + I+ +P + + V ++
Sbjct: 524 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKAD---VRVW 580
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
GALL ACRI+ N+D+G++++ +++K+ + + LL+NI+++A R+++ VR K
Sbjct: 581 GALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVK 640
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDN 612
G +K PG S IEING +H F+ GD SH ++IY LD + ++D K+ + D
Sbjct: 641 GFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNI---MVDIKKLGYQADT 693
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 13/251 (5%)
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W + +++ GQL AR +FDR P D + A+I Y F A+ L+R M R+
Sbjct: 37 WQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRV 96
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
P+K+ +L C+ L L G+ IH + + D V+TALI++Y +C A
Sbjct: 97 APNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN 156
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKAL-ELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F ++ +D +W +++ G A +G + A+ L GG +P+ T + +L
Sbjct: 157 VFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL----- 211
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHY-------GCLIDLLGRAGLLDEAEELIRKIPNENN 489
L G F T Y ++ LE L+D+ + L A + +P N+
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271
Query: 490 EIIVPLYGALL 500
L G +
Sbjct: 272 VTWSALIGGFV 282
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 198/537 (36%), Positives = 319/537 (59%), Gaps = 17/537 (3%)
Query: 46 GSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVK 105
G ++ P L +N +IK+ + +++L+ F + E GVS D F+ V KA LG V+
Sbjct: 56 GEVEDPFL--WNAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQ 113
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+G ++HG++ KTG+ D ++ N ++ +Y G + +++FD MP +D VS+N I G+V
Sbjct: 114 EGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYV 173
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EFT 223
KC A ++F +LMP E ++S S + G I + E+ E
Sbjct: 174 KCGLIGSARELF-------DLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKD 226
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
I N+L+D Y K G + +A++LF MP ++V+ W +M+ GY G + KA+ LFD+ P
Sbjct: 227 LISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPH 286
Query: 284 RDIVLWTAMINGYVQFNRFD-EAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGK 341
RD+V + +M+ GYVQ N+++ EA+ +F +M+ L PD+ LV +L+ AQLG L +
Sbjct: 287 RDVVAYNSMMAGYVQ-NKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 345
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H YI E + + + ALI+MY+KCG I++A+ +F + K W ++I GLA++G
Sbjct: 346 DMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHG 405
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A ++ ++ KPDDITF+G+L+ACSH GLV EG F M ++I+P+L+HY
Sbjct: 406 LGESAFDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 465
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++D+L R+G ++ A+ LI ++P E N++I + L+AC + + GE +A L
Sbjct: 466 GCMVDILSRSGSIELAKNLIEEMPMEPNDVI---WRTFLTACSHHKEFETGEVVAKHLIL 522
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ S + LL+N+YAS W+D VR MKE ++KVPGCS IE++G +HEF V
Sbjct: 523 QAGYNPSSYVLLSNMYASFGMWKDARRVRTMMKERELQKVPGCSWIELDGRVHEFFV 579
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 188/445 (42%), Gaps = 63/445 (14%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAK---KGSFRKSLLLFSKLRERGVSPDNFTYP 92
G L +A +IF + ++YN +I + K GS R+ L K + +S ++
Sbjct: 145 GCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISG 204
Query: 93 FVFKAVG------WLGEVKKGEKVH------GYVVKTGLE-----------FDTYVCNSI 129
+ + G E+ + + + GYV +E D ++
Sbjct: 205 YAQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATM 264
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+D Y LG + K LFD+MP +DVV++N ++G+V+ +A+++F M + +L PD
Sbjct: 265 IDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPD 324
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFT-PIMGNALLDMYCKCGCLSEARELFD 248
E T+V LSA L L ++H YI ++ F +G AL+DMY KCG + +A +F+
Sbjct: 325 ETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFE 384
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+ NK++ W +M+ G G E A D +
Sbjct: 385 RIENKSIDHWNAMIGGLAIHGLGESAFD-------------------------------M 413
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYA 367
E++ +KPD V +L C+ G +++G + +++I ++++ +
Sbjct: 414 LLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILS 473
Query: 368 KCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALELFSQMI-SGGAKPDDITF 425
+ G IE A + E+ E + W + + + + + + +I G P
Sbjct: 474 RSGSIELAKNLIEEMPMEPNDVIWRTFLTACSHHKEFETGEVVAKHLILQAGYNPSSYVL 533
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTE 450
+ + A G+ + RR M E
Sbjct: 534 LSNMYASF--GMWKDARRVRTMMKE 556
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 212/596 (35%), Positives = 322/596 (54%), Gaps = 79/596 (13%)
Query: 1 MTQLKQIQAQIF-QIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ LK I A++ + + + +NKL+ + G YA K+F I P + L
Sbjct: 15 LKSLKSIHARLLIESSVASSEFVINKLLRL--YSRFGATDYAHKVFDEITQPNAYLWTSL 72
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I + + + ++ LF ++R +S NFT V KA+ L K G+ V+G+
Sbjct: 73 IHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFA----- 127
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
FDEM +KD+VSWN+ ISG+ D VD+ R+
Sbjct: 128 --------------------------FDEMCEKDIVSWNMMISGYGN----NDRVDIARK 157
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
+ MP+ V T C Y K G
Sbjct: 158 F---FDRMPERNVVSWTSMICG--------------------------------YVKAGD 182
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK-ARDLFDRSPVRDIVLWTAMINGYVQ 298
++EA+ LFD MP K++ W MVSGY++ G AR LFD+ P++++V W+ MI GY +
Sbjct: 183 MAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYAR 242
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAV 357
+ +A+ LF + +KPD+ ++ +++ C+QLG ++ + IH Y+ + ++ D
Sbjct: 243 NGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLS-DLR 301
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V T+LI+MYAKCG IEKAL++F KD ++++I LA +G A+ LF +M
Sbjct: 302 VFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRAN 361
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
KPD +TF+GVL+AC+HGGLVDEGR++F MTE + IQP +HY C++DLLGR G L+EA
Sbjct: 362 IKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEA 421
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
LIR +P + ++ +GALL+ACR++ NV + E AA L KIE +S + LL+NIY
Sbjct: 422 YNLIRNMPIAPHSVV---WGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIY 478
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
A+A RW V VR K++E VRK G S IE++ ++HEF++GD SH++ I +L
Sbjct: 479 AAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLIL 534
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 172/387 (44%), Positives = 253/387 (65%), Gaps = 9/387 (2%)
Query: 225 IMGNALLDMYCKC-GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
++ NAL+ ++ G LS+A L + + + ++++ Y G++ AR LFD P
Sbjct: 246 LVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPA 305
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
R+ V W+AM+NGYVQ EA+ LF MQ ++PD +LV +L CAQLG LEQGKW+
Sbjct: 306 RNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWV 365
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
HGY+ N I + + TAL++MYAKCG ++ A+E+F ++EK+ +WT++I GLAM+G+
Sbjct: 366 HGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRG 425
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
++ALELFSQM G KPDDI FIG L AC+H GLVD+GR F++M Y I+PK+EHYGC
Sbjct: 426 SEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGC 485
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLL R GLL+EA E++ K+P + + +I +GAL++ CR + NV++ E + ++E
Sbjct: 486 MVDLLARNGLLNEAREMVEKMPMKPDALI---WGALMAGCRFHKNVELAEYVVKHWIELE 542
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
S + LL NIYA++ R +R M+E GV K PGCS++EI G+IH+F+VGD SH
Sbjct: 543 PDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSH 602
Query: 584 SEMKEIYSMLDRMAKTLLDSKQNAMEG 610
++EI S D +DS+ EG
Sbjct: 603 PFIEEILSKWDE-----IDSRIRLEEG 624
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 167/381 (43%), Gaps = 73/381 (19%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEK-----V 110
+N LI+A A +L L++ L G P T P + K++ L G + V
Sbjct: 174 HNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLA-LSPAVPGARGLALAV 232
Query: 111 HGYVVKTGL--------------------------------EFDTYVCNSIMDMYGVLGK 138
H + VK GL D N+++ Y G+
Sbjct: 233 HAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGR 292
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ + + LFDEMP ++ VSW+ ++G+V+ +A+ +F RM Q + PD+ +V L+
Sbjct: 293 VTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARM-QADGVRPDDTVLVGVLA 351
Query: 199 ACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC L LE GK +H Y+ + T +G AL+DMY KCG + A E+F M KNV+
Sbjct: 352 ACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLA 411
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
WT+M+ G G R EA+ LF +M+ + +
Sbjct: 412 WTTMIKGLAMHG-------------------------------RGSEALELFSQMERLGV 440
Query: 318 KPDKFILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
KPD + L C G +++G+ + + + I ++++ A+ GL+ +A
Sbjct: 441 KPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAR 500
Query: 377 EIFYELREK-DAASWTSIICG 396
E+ ++ K DA W +++ G
Sbjct: 501 EMVEKMPMKPDALIWGALMAG 521
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 133/249 (53%), Gaps = 6/249 (2%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+ T N L+ + G + A +F + + ++++ ++ + + G R++L LF++
Sbjct: 276 DASTFNTLIT--AYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFAR 333
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
++ GV PD+ V A LG +++G+ VHGY+ + ++ +++DMY G+
Sbjct: 334 MQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGE 393
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ ++F M +K+V++W I G R +A+++F +M + + PD+ + L
Sbjct: 394 MQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMER-LGVKPDDIAFIGALC 452
Query: 199 ACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NV 255
ACT ++ G+E+ + ++ P + + ++D+ + G L+EARE+ ++MP K +
Sbjct: 453 ACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDA 512
Query: 256 ICWTSMVSG 264
+ W ++++G
Sbjct: 513 LIWGALMAG 521
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 335/592 (56%), Gaps = 41/592 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++I +F++G Q + L+ + G + A +F + + ++N +I
Sbjct: 192 RKIHCWVFKLGFQWDVFVAASLI--HMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLI 249
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G+ ++L + ++R G++ D+ T + LG++ +H YV+K GLEF+ +
Sbjct: 250 QNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELF 309
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V N++++MY G + + +K+F +M +DVVSWN I+ + + A F +M Q
Sbjct: 310 VSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKM-QLN 368
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSE 242
L PD T+VS S ++ + + +H +I + L ++GNA++DMY K G +
Sbjct: 369 GLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDS 428
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A ++F N+I PV+D+V W +I+GY Q
Sbjct: 429 AHKVF------NLI-------------------------PVKDVVSWNTLISGYTQNGLA 457
Query: 303 DEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
EA+ ++R M+ R +K ++ V++L A +GAL+QG IHG++ + + +D V T
Sbjct: 458 SEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTC 517
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI++Y KCG + A+ +FY++ + + W +II ++G KAL+LF +M G KPD
Sbjct: 518 LIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPD 577
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+TFI +LSACSH GLVDEG+ FF+ M E Y I+P L+HYGC++DLLGRAG L+ A + I
Sbjct: 578 HVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFI 636
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+ +P + I +GALL ACRI+GN+++G+ + L +++S++ ++ LL+NIYA+
Sbjct: 637 KDMPLHPDASI---WGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVG 693
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+WE V VR +E G++K PG SSIE+N + F G+ SH + KEIY+ L
Sbjct: 694 KWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAEL 745
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 228/492 (46%), Gaps = 84/492 (17%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+++H +V +G ++ ++++Y LG + + FD++ KDV +WN IS +V+
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPI 225
F +A+D F ++ D T L AC L + G++IH ++ + ++
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVF 208
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR----- 280
+ +L+ MY + G + AR LFD+MP +++ W +M+SG + G +A D+ D
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 268
Query: 281 ---------------SPVRDIVLWT-------------------AMINGYVQFNRFDEAV 306
+ + DI T A+IN Y +F +A
Sbjct: 269 INMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQ 328
Query: 307 ALFRE-------------------------------MQIIRLKPDKFILVALLTGCAQLG 335
+F++ MQ+ L+PD LV+L + AQ
Sbjct: 329 KVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSR 388
Query: 336 ALEQGKWIHGYINENRITVDAVV-ATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
+ + +HG+I ++AVV A+++MYAK G+I+ A ++F + KD SW ++I
Sbjct: 389 DYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLI 448
Query: 395 CGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
G NG ++A+E++ M K + T++ +L+A +H G + +G R + +
Sbjct: 449 SGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT-N 507
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
+ + CLIDL G+ G L +A L ++P E++ VP + A++S I+G+ GE
Sbjct: 508 LHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESS---VP-WNAIISCHGIHGH---GE 560
Query: 514 KLAALLEKIESK 525
K L +++ +
Sbjct: 561 KALKLFREMQDE 572
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/598 (33%), Positives = 332/598 (55%), Gaps = 44/598 (7%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A K+F S+ ++ +N +I + + G ++++ +F +R G+ P T
Sbjct: 231 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 290
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A L + +G++ H + L+ D + +SI++ Y +G I + + +F M +KDVV
Sbjct: 291 SASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVV 350
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN+ IS +V+ + A+++ MR NL D T+ S LSA N++LGKE H Y
Sbjct: 351 TWNLLISSYVQHHQVGKALNMCHLMRSE-NLRFDSVTLSSILSASAVTSNIKLGKEGHCY 409
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK--------------------- 253
I + LE ++ N+++DMY KC + +AR++FD +
Sbjct: 410 CIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEA 469
Query: 254 --------------NVICWTSMVSGYVNCGQLEKARDLFDRSPV----RDIVLWTAMING 295
NVI W S++ G++ GQ+ +A+D+F + +++ WT +I+G
Sbjct: 470 LKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISG 529
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Q EA+ F++MQ ++P + ++L C + +L G+ IHG+I + +
Sbjct: 530 LAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLS 589
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
VAT+L++MYAKCG I++A ++F+ + K+ + ++I A++G+ +AL LF +
Sbjct: 590 VPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQK 649
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G +PD ITF +LSACSH GLV+EG F M + + P +EHYGC++ LL R G LD
Sbjct: 650 EGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLD 709
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA LI +P + + I+ G+LL+ACR + +++GE L+ L K+E +S + L+N
Sbjct: 710 EALRLILTMPFQPDAHIL---GSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSN 766
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
YA+A RW +V+N+R MK G+RK PGCS I+ G ++ F+ GD SH + +EIY+ML
Sbjct: 767 AYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAML 824
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/608 (27%), Positives = 280/608 (46%), Gaps = 120/608 (19%)
Query: 5 KQIQAQIFQIG--LQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+QI A+I + G +N KL+VF C P A ++F ++ + ++ +
Sbjct: 99 QQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPE-----VAVRLFHRLRVRNVFSWAAI 153
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ + G +LL F +++E GV PDNF P V KA G L + G+ VHGYV+K G
Sbjct: 154 VGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGF 213
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+V +S++DMYG G + + +K+FD M +K+VV+WN I G+V+ ++A+DVF
Sbjct: 214 GACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYD 273
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG 238
MR + P TV S LSA L L GK+ H I L+ I+G+++++ Y K G
Sbjct: 274 MRVE-GIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVG 332
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ E A +F R +D+V W +I+ YVQ
Sbjct: 333 LI-------------------------------EDAELVFSRMLEKDVVTWNLLISSYVQ 361
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
++ +A+ + M+ L+ D L ++L+ A ++ GK H Y + D VV
Sbjct: 362 HHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVV 421
Query: 359 ATALIEMYAKC-------------------------------GLIEKALEIFYELR---- 383
A ++I+MYAKC GL +AL++FY+++
Sbjct: 422 ANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSV 481
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ SW S+I G NG++N+A ++FSQM S G +P+ IT+ ++S + G E
Sbjct: 482 PPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAIL 541
Query: 444 FFNTMTEVYQIQPKL---------------------------EHYGC--------LIDLL 468
FF M E I+P + H C L+D+
Sbjct: 542 FFQKMQEA-GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMY 600
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK--IESKD 526
+ G +DEA+++ + ++ +P+Y A++SA ++G L L+K IE
Sbjct: 601 AKCGSIDEAKKVFHMMSSKE----LPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDS 656
Query: 527 SSFHTLLA 534
+F ++L+
Sbjct: 657 ITFTSILS 664
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 35 HGNLLYAEKIFGSIQS----PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
+G + A+ +F +QS P L+ + LI A+ G +++L F K++E G+ P +
Sbjct: 498 NGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIAS 557
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
V A + + G +HG++ + V S++DMY G I KK+F M
Sbjct: 558 ITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMS 617
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
K++ +N IS + + +A+ +F+ + Q + PD T S LSAC+ + G
Sbjct: 618 SKELPIYNAMISAYALHGQAVEALALFKHL-QKEGIEPDSITFTSILSACSHAGLVNEGL 676
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
+ + + PIM + ++ + +CG L EA L MP
Sbjct: 677 NLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMP 719
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI--NENRITVDAVV 358
E+V L EM+ + I LL GC AL G+ IH I N + + V
Sbjct: 59 HLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYV 118
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T L+ YAKC E A+ +F+ LR ++ SW +I+ G AL F +M G
Sbjct: 119 ETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGV 178
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC------LIDLLGRAG 472
PD+ VL AC L+ G+ V+ K+ C L+D+ G+ G
Sbjct: 179 FPDNFVLPNVLKACGSLQLIGLGK-------GVHGYVLKMGFGACVFVSSSLVDMYGKCG 231
Query: 473 LLDEAEELIRKIPNEN----NEIIV 493
+L++A ++ + +N N +IV
Sbjct: 232 VLEDARKVFDSMVEKNVVTWNSMIV 256
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 284/464 (61%), Gaps = 8/464 (1%)
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
N+ F+ +V W S++ + + + +A F RMR + P+ T ++ LSAC
Sbjct: 44 NISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLA-GVEPNHITFITLLSAC 102
Query: 201 TAL--KNLELGKEIHRYI-NQELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVI 256
++ +H Y L+ +M G AL+DMY KC L AR++F + KN +
Sbjct: 103 ADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSV 162
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
W +M++G++ G++E A LFD P RD + WTA+ING ++ ++A+ F +MQ
Sbjct: 163 SWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSG 222
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+ D ++A+L CA LGAL G W+H ++ + ++ +LI+MY++CG IE A
Sbjct: 223 VAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFAR 282
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F ++ ++ SW SII G A+NG +++LE F M G KPD +++ G L+ACSH G
Sbjct: 283 QVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAG 342
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LV++G F+ M V++I P++EHYGC++DL GRAG L++A +I ++P + NE+++
Sbjct: 343 LVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVL--- 399
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
G+LL+ACR +G+V++ E+L L K++ + +++ LL+NIYA+ +W+ NVR+ MK
Sbjct: 400 GSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKAR 459
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
GV+K PG SS+EI+G +HEF+ GD H++ IYSMLD + L
Sbjct: 460 GVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHEL 503
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 185/434 (42%), Gaps = 74/434 (17%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
NP LN F P+ + + K + P +L + L + + + G ++ F+
Sbjct: 27 SNPTKLN----FPRSPNSPHRNISSKFNPNSVDPIVLWTSSLAR-YCRNGQLSEAAAEFT 81
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKK--GEKVHGYVVKTGLEF-DTYVCNSIMDMYG 134
++R GV P++ T+ + A +HGY K GL+ V +++DMY
Sbjct: 82 RMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYS 141
Query: 135 VLGKICNVKK-------------------------------LFDEMPDKDVVSWNVSISG 163
++ + +K LFDEMP +D +SW I+G
Sbjct: 142 KCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALING 201
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEF 222
+K E A++ F +M Q + D ++++ L+AC L L LG +HR++ QE +
Sbjct: 202 LLKHGYSEQALECFHQM-QRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKD 260
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ N+L+DMY +CGC+ AR++F +M + ++ W S++ G+
Sbjct: 261 NIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFA---------------- 304
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+NG+ DE++ F MQ KPD LT C+ G + +G
Sbjct: 305 ----------VNGFA-----DESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLE 349
Query: 343 IHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMN 400
+ + ++IT ++++Y + G +E AL + E+ K + S++ +
Sbjct: 350 LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTH 409
Query: 401 GKINKALELFSQMI 414
G +N A L +
Sbjct: 410 GDVNLAERLMKHLF 423
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 137/294 (46%), Gaps = 11/294 (3%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G + A ++F + + +++ LI K G ++L F +++ GV+ D + V
Sbjct: 174 NGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAV 233
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + G VH +V+ + + + NS++DMY G I +++F +M + +
Sbjct: 234 LAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTL 293
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSWN I G +++++ F M Q PD + L+AC+ + G E+
Sbjct: 294 VSWNSIIVGFAVNGFADESLEFFYAM-QKEGFKPDGVSYTGALTACSHAGLVNKGLELFD 352
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQL 271
+ + TP + + ++D+Y + G L +A + +EMP K N + S+++ G +
Sbjct: 353 NMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDV 412
Query: 272 EKA----RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI--IRLKP 319
A + LF P D + + N Y ++D A + R M+ ++ KP
Sbjct: 413 NLAERLMKHLFKLDPEGD-AYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKP 465
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 206/656 (31%), Positives = 344/656 (52%), Gaps = 81/656 (12%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
H S G L A ++F I +P AYN LI+A++ G F ++ L+ + V+P+ +T+
Sbjct: 44 HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTF 103
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
PFV KA L +++ G +H + GL D +V +++D+Y + + +F +MP
Sbjct: 104 PFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPM 163
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+DVV+WN ++G+ + A+ M+ L P+ T+VS L L G
Sbjct: 164 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Query: 212 IHRYIN----QELEFTPIMGNALLDMY--CK----------------------------- 236
IH Y ++ E ++G ALLDMY CK
Sbjct: 224 IHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVL 283
Query: 237 CGCLSEARELFDEM----------------------------------------PNKNVI 256
C ++EA LF +M + ++
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT 343
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
S++S Y G + +A FD V+D + + A+++G VQ + +EA +F++MQ
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
++PD +V+L+ C+ L AL+ GK HG + + ++ + +LI+MYAKCG I+ +
Sbjct: 404 MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSR 463
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F ++ +D SW ++I G ++G +A LF M + G PDD+TFI +++ACSH G
Sbjct: 464 QVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LV EG+ +F+TMT Y I P++EHY C++DLL R GLLDEA + I+ +P + + V ++
Sbjct: 524 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKAD---VRVW 580
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
GALL ACRI+ N+D+G++++ +++K+ + + LL+NI+++A R+++ VR K
Sbjct: 581 GALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVK 640
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDN 612
G +K PG S IEING +H F+ GD SH ++IY LD + ++D K+ + D
Sbjct: 641 GFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNI---MVDIKKLGYQADT 693
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 13/251 (5%)
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W + +++ GQL AR +FDR P D + A+I Y F A+ L+R M R+
Sbjct: 37 WQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRV 96
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
P+K+ +L C+ L L G+ IH + + D V+TALI++Y +C A
Sbjct: 97 APNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN 156
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKAL-ELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F ++ +D +W +++ G A +G + A+ L GG +P+ T + +L
Sbjct: 157 VFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL----- 211
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHY-------GCLIDLLGRAGLLDEAEELIRKIPNENN 489
L G F T Y ++ LE L+D+ + L A + +P N+
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271
Query: 490 EIIVPLYGALL 500
L G +
Sbjct: 272 VTWSALIGGFV 282
>gi|125573086|gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japonica Group]
Length = 616
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 309/544 (56%), Gaps = 48/544 (8%)
Query: 40 YAEKIFGSIQ---SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
+A+ +F + S +N L++ A S R+SLL FS++R V+PD +T+P V K
Sbjct: 66 HADSVFAHLAEEASRHAFPWNTLVRLHAA-ASPRRSLLYFSRMRRAAVAPDAYTFPAVLK 124
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A G + G VHG V+TGL+ D + N+++ Y +G + +K+FD +D+VS
Sbjct: 125 ACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGV-RDLVS 183
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN ++G+V C + A D+F MRQ S T
Sbjct: 184 WNSMVAGYVGCGEVDLAQDLFDEMRQ-----------RDAFSWAT--------------- 217
Query: 217 NQELEFTPIMGNALLDMYCK-CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
++D Y + G + ARELFD+MP+++++CW SM+ GY G++++AR
Sbjct: 218 -------------MIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEAR 264
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
LF+ P R+++ W+ +I+GYV+F +EA+ F+ M +KPD+ V + CAQLG
Sbjct: 265 VLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLG 324
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
ALEQG+W+H Y+ + ++ D VV TALI+MY KCG ++ A IF + +K +W +I
Sbjct: 325 ALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIV 384
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
GL +G A++LF+QM + A DD++ + VL++C+H GLV EG F M + ++
Sbjct: 385 GLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLE 444
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
PK+EHYG LIDLLGRAG +D+A I +P E L+G+LL++CR + V++ E
Sbjct: 445 PKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTP---ELWGSLLASCRSHRCVELAELS 501
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
L + + DS + LL+NIYA W+DV +R+ M G++K G S IE++G IHE
Sbjct: 502 VERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQIHE 561
Query: 576 FLVG 579
F+ G
Sbjct: 562 FVNG 565
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ HG + A +F + +++++++I + + G ++L F ++ G+ PD
Sbjct: 254 YARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAA 313
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A LG +++G +H Y+ K + FD V +++DMY G++ K +F+ MP
Sbjct: 314 VGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPK 373
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K VV+WNV I G DA+ +F +M M D+ ++++ L++CT + G
Sbjct: 374 KSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPM-DDLSILAVLTSCTHAGLVSEGLG 432
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
I + ++L P + + AL+D+ + G + +AR + MP
Sbjct: 433 IFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMP 474
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 177/458 (38%), Positives = 285/458 (62%), Gaps = 15/458 (3%)
Query: 157 WNV---SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
WN+ +I +V + + V+ RMR + PD T L + +L LG+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNH-RVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
I L+ P + +LL+MY CG L A+ +FD+ +K++ W S+V+ Y G ++
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-----LKPDKFILVAL 327
AR LFD P R+++ W+ +INGYV ++ EA+ LFREMQ+ + ++P++F + +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKD 386
L+ C +LGALEQGKW+H YI++ + +D V+ TALI+MYAKCG +E+A +F L +KD
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 387 AASWTSIICGLAMNGKINKALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+++++IC LAM G ++ +LFS+M S P+ +TF+G+L AC H GL++EG+ +F
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
M E + I P ++HYGC++DL GR+GL+ EAE I +P E + +I +G+LLS R+
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI---WGSLLSGSRM 382
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
G++ E L +++ +S + LL+N+YA RW +V +R +M+ G+ KVPGCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+E+ G++HEF+VGD S E + IY+MLD + + L ++
Sbjct: 443 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREA 480
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 180/390 (46%), Gaps = 72/390 (18%)
Query: 56 YNLLIKAFAKKGSF---RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+N++I+A S + ++ ++R VSPD T+PF+ + + G++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGK-------------------------------ICN 141
++ GL+ D +V S+++MY G I +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR----QGCNLMPDEGTVVSTL 197
+KLFDEMP+++V+SW+ I+G+V C ++++A+D+FR M+ + P+E T+ + L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 198 SACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
SAC L LE GK +H YI++ +E ++G AL+DMY KCG L A+ +F+ + +K
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK--- 263
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII- 315
+D+ ++AMI + DE LF EM
Sbjct: 264 ---------------------------KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 316 RLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ P+ V +L C G + +GK + I E IT ++++Y + GLI++
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 375 ALEIFYEL-REKDAASWTSIICGLAMNGKI 403
A + E D W S++ G M G I
Sbjct: 357 AESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 182/429 (42%), Gaps = 60/429 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++ AQI GL ++P L+ + S G+L A+++F S L A+N ++ A+A
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNM--YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 65 KKGSFRKSLLLFSKLRERG------------------------------------VSPDN 88
K G + LF ++ ER V P+
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 89 FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
FT V A G LG +++G+ VH Y+ K +E D + +++DMY G + K++F+
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 149 M-PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+ KDV +++ I ++ +F M N+ P+ T V L AC +
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 208 LGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
GK + + +E TP + + ++D+Y + G + EA MP +V+ W S++SG
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 265 YVNCGQLEKARDLFDRSPVRDIV---LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
G ++ R D + + + N Y + R+ E + EM++ +
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK-- 437
Query: 322 FILVALLTGCAQLGALEQGKWIHGYI--NENRITVDAVVAT--ALIEMYAKCGLIEKALE 377
+ GC+ +E +H ++ +E++ + + A +++ + G + E
Sbjct: 438 ------VPGCSY---VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKE 488
Query: 378 IFYELREKD 386
+ +L EKD
Sbjct: 489 VLLDLNEKD 497
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 172/387 (44%), Positives = 253/387 (65%), Gaps = 9/387 (2%)
Query: 225 IMGNALLDMYCKC-GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
++ NAL+ ++ G LS+A L + + + ++++ Y G++ AR LFD P
Sbjct: 246 LVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPA 305
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
R+ V W+AM+NGYVQ EA+ LF MQ ++PD +LV +L CAQLG LEQGKW+
Sbjct: 306 RNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWV 365
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
HGY+ N I + + TAL++MYAKCG ++ A+E+F ++EK+ +WT++I GLAM+G+
Sbjct: 366 HGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRG 425
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
++ALELFSQM G KPDDI FIG L AC+H GLVD+GR F++M Y I+PK+EHYGC
Sbjct: 426 SEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGC 485
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLL R GLL+EA E++ K+P + + +I +GAL++ CR + NV++ E + ++E
Sbjct: 486 MVDLLARNGLLNEAREMVEKMPMKPDALI---WGALMAGCRFHKNVELAEYVVKHWIELE 542
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
S + LL NIYA++ R +R M+E GV K PGCS++EI G+IH+F+VGD SH
Sbjct: 543 PDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSH 602
Query: 584 SEMKEIYSMLDRMAKTLLDSKQNAMEG 610
++EI S D +DS+ EG
Sbjct: 603 PFIEEILSKWDE-----IDSRIRLEEG 624
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 167/381 (43%), Gaps = 73/381 (19%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEK-----V 110
+N LI+A A +L L++ L G P T P + K++ L G + V
Sbjct: 174 HNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLA-LSPAVPGARGLALAV 232
Query: 111 HGYVVKTGL--------------------------------EFDTYVCNSIMDMYGVLGK 138
H + VK GL D N+++ Y G+
Sbjct: 233 HAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGR 292
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ + + LFDEMP ++ VSW+ ++G+V+ +A+ +F RM Q + PD+ +V L+
Sbjct: 293 VTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARM-QADGVRPDDTVLVGVLA 351
Query: 199 ACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC L LE GK +H Y+ + T +G AL+DMY KCG + A E+F M KNV+
Sbjct: 352 ACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLA 411
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
WT+M+ G G R EA+ LF +M+ + +
Sbjct: 412 WTTMIKGLAMHG-------------------------------RGSEALELFSQMERLGV 440
Query: 318 KPDKFILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
KPD + L C G +++G+ + + + I ++++ A+ GL+ +A
Sbjct: 441 KPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAR 500
Query: 377 EIFYELREK-DAASWTSIICG 396
E+ ++ K DA W +++ G
Sbjct: 501 EMVEKMPMKPDALIWGALMAG 521
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 133/249 (53%), Gaps = 6/249 (2%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+ T N L+ + G + A +F + + ++++ ++ + + G R++L LF++
Sbjct: 276 DASTFNTLIT--AYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFAR 333
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
++ GV PD+ V A LG +++G+ VHGY+ + ++ +++DMY G+
Sbjct: 334 MQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGE 393
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ ++F M +K+V++W I G R +A+++F +M + + PD+ + L
Sbjct: 394 MQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMER-LGVKPDDIAFIGALC 452
Query: 199 ACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NV 255
ACT ++ G+E+ + ++ P + + ++D+ + G L+EARE+ ++MP K +
Sbjct: 453 ACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDA 512
Query: 256 ICWTSMVSG 264
+ W ++++G
Sbjct: 513 LIWGALMAG 521
>gi|345505224|gb|AEN99836.1| chlororespiratory reduction 4, partial [Lepidium virginicum]
Length = 594
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 207/588 (35%), Positives = 324/588 (55%), Gaps = 24/588 (4%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIF----------GSIQSPC 52
+ +I AQ+ G +N ++++ H +L +A +F G + P
Sbjct: 9 VNKIHAQLITTGFIKNTNLTTRIVLAFASSRHQHLAEFARCVFEEHYVYSFPYGETEDPF 68
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
L +N ++K+ + R++LLLF + E GVS D F+ V KA LG VK G ++HG
Sbjct: 69 L--WNAVMKSHSHGTDPRRALLLFCLMLENGVSVDKFSSSLVLKACSRLGFVKGGMQIHG 126
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
++ KTGL D ++ N ++ +Y G + +++FD MP +D VS+N G VKC E
Sbjct: 127 FLRKTGLWSDLFLQNCLIALYLKCGCLGFARQIFDRMPKRDSVSYNPXXEGXVKCGLIES 186
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALL 231
A ++F + S + G I + E+ E I N+++
Sbjct: 187 ARELFXLXXX------EXKNXXSXXCMXSGYAQTSDGLXIASKLFSEMPEKDLISWNSII 240
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
D Y K G +A++L+D MP ++VI W +M+ GYV G + +A+ L D P RD+V + +
Sbjct: 241 DGYVKHGRXEDAKDLYDVMPRRDVITWATMIDGYVKLGFVHQAKTLLDXIPHRDVVAYNS 300
Query: 292 MINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
M+ GYVQ EA+ LF +M+ L PD+ LV +L+ AQLG L + ++ Y+ +
Sbjct: 301 MMAGYVQNKYHMEALELFGDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDMYLYVVKK 360
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ + + +LI+MY+KCG I+ A+ +F L K W +II GLA++G+ A +
Sbjct: 361 QFFLGGKLWVSLIDMYSKCGSIQHAMLVFEGLENKTIDHWNAIIGGLAIHGRGGPAFNML 420
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
Q+ KPDDITF GVL+ACSH G V EG F M ++I+P+L+HYGC++D+L R
Sbjct: 421 LQIERSSIKPDDITFTGVLNACSHSGFVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 480
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
+G ++ A+ LI K+P E N++I + L+AC + +MGE +A L + S +
Sbjct: 481 SGSIELAKNLIEKMPIEPNDVI---WRTFLTACSHHKEFEMGELVAKHLILQADYNPSSY 537
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
LL+N+YAS W+DV VR MKE + K+PGCSSIE++G +HEF V
Sbjct: 538 VLLSNMYASFGMWKDVRGVRTMMKERKIPKIPGCSSIELDGRVHEFFV 585
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 293/499 (58%), Gaps = 12/499 (2%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++ ++H V+ G++ D V + Y G++ L PD V + +I
Sbjct: 42 SARRASELHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIH 101
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELE 221
H A+ + M L+P T+ ++L AC L +G+ +H Y + L
Sbjct: 102 AHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPAC---GGLAVGRALHGYAVKLALS 158
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
P + ALL MY + G + AR LFD M P+ +V+ T+M++ Y G L+ AR LFD
Sbjct: 159 GEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDG 218
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P +D++ W AM++GY Q R EA+ LFR M ++PD+ +V L+ AQLG E G
Sbjct: 219 LPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESG 278
Query: 341 KWIHGYI---NENRITVDAVVATALIEMYAKCGLIEKALEIFYELR--EKDAASWTSIIC 395
+W+H ++ + R+ ++A V TALI+MY KCG +E A+ +F +L ++D +W +++
Sbjct: 279 RWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVN 338
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G AM+G +AL F Q+ + G P DITFIGVL+ACSH GLVDEGR F +M E Y I+
Sbjct: 339 GYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIE 398
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
PK+EHYGC++DLLGRAG ++EA EL++ + + + ++ +LL+ACR++ N+++G+++
Sbjct: 399 PKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAV--MWASLLAACRLHKNMELGQRI 456
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A L +S + LL+N+YA+A W +V VR M+ G++K PGCS++E+ + E
Sbjct: 457 ADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVEVGRRVVE 516
Query: 576 FLVGDPSHSEMKEIYSMLD 594
F+ GD SH EIY+ L+
Sbjct: 517 FVAGDRSHPRAAEIYAKLE 535
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 188/458 (41%), Gaps = 81/458 (17%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+ ++ A + G+ Q+ +L + + G L A + P + Y I A
Sbjct: 45 RASELHAAAVRAGVDQDKAVDFRLQR--AYAASGRLDLAVALLRRTPDPTAVFYTSAIHA 102
Query: 63 FAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ +G +L L S+ L G+ P T A G L G +HGY VK L
Sbjct: 103 HSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPACGGLA---VGRALHGYAVKLALSG 159
Query: 122 DTYVCNSIMDM--------------------------------YGVLGKICNVKKLFDEM 149
+ YV +++ M Y +G + + + LFD +
Sbjct: 160 EPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGL 219
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLEL 208
P KD++ WN + G+ + R +A+ +FRRM R G PDE +VV LSA L E
Sbjct: 220 PSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVE--PDEVSVVLALSAVAQLGTAES 277
Query: 209 GKEIHRYI----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEM--PNKNVICWTSMV 262
G+ +H ++ ++ + +G AL+DMY KCG L +A +F ++ +++++ W +MV
Sbjct: 278 GRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMV 337
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
NGY EA+A F +++ L P
Sbjct: 338 -------------------------------NGYAMHGHSREALAAFGQLRAQGLWPTDI 366
Query: 323 ILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
+ +L C+ G +++G+ + E I ++++ + G +E+A E+
Sbjct: 367 TFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQS 426
Query: 382 L-REK-DAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ R K DA W S++ ++ + + +++ G
Sbjct: 427 MTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANG 464
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 150/314 (47%), Gaps = 20/314 (6%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G+Q +P ++ + + G L A +F + S L+ +N ++ + + G ++L
Sbjct: 186 GMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALR 245
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG---LEFDTYVCNSIMD 131
LF ++ GV PD + AV LG + G +H +V + + + V +++D
Sbjct: 246 LFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALID 305
Query: 132 MYGVLGKICNVKKLFDEM--PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMP 188
MY G + + +F ++ D+D+V+WN ++G+ +A+ F ++R QG L P
Sbjct: 306 MYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQG--LWP 363
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEAREL 246
+ T + L+AC+ ++ G+E+ R + +E P + + ++D+ + G + EA EL
Sbjct: 364 TDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFEL 423
Query: 247 FDEMPNK--NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING--YVQFNRF 302
M + + W S+++ C +L K +L R + D ++ + N YV +
Sbjct: 424 VQSMTRTKPDAVMWASLLAA---C-RLHKNMELGQR--IADHLVANGLANSGTYVLLSNM 477
Query: 303 DEAVALFREMQIIR 316
A +RE+ +R
Sbjct: 478 YAAAGNWREVGRVR 491
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 339/643 (52%), Gaps = 84/643 (13%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F ++ L +N+L+ AK G F S+ LF K+ GV D++T+ V
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
K+ L V GE++HG+++K+G V NS++ Y ++ + +K+FDEM ++DV+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I+G+V E + VF +M + D T+VS + C + + LG+ +H
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 216 -----INQELEFTPIMGNALLDMYCKCGCLS----------------------------- 241
++E F N LLDMY KCG L
Sbjct: 322 GVKACFSREDRFC----NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 242 --EARELFDEM------PN--------------------KNVICW-------------TS 260
EA +LF+EM P+ K V W +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKP 319
++ Y CG +++A +F V+DI+ W +I GY + +EA++LF + + R P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D+ + +L CA L A ++G+ IHGYI N D VA +L++MYAKCG + A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
++ KD SWT +I G M+G +A+ LF+QM G + D+I+F+ +L ACSH GLVD
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG RFFN M +I+P +EHY C++D+L R G L +A I +P + I +GAL
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI---WGAL 674
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
L CRI+ +V + EK+A + ++E +++ ++ L+ANIYA A +WE V +R+++ + G+R
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
K PGCS IEI G ++ F+ GD S+ E + I + L ++ +++
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 777
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/555 (23%), Positives = 244/555 (43%), Gaps = 90/555 (16%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N ++ F + G+ ++ L + + P T V + +K G++V ++
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G D+ + + + MY G + ++FDE+ + + WN+ ++ K F ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
F++M + D T + ++L+++ G+++H +I +GN+L+ Y
Sbjct: 183 FKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV------------ 283
K + AR++FDEM ++VI W S+++GYV+ G EK +F + V
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 284 ---------------------------RDIVLWTAMINGYVQFNRFDEAVALFREM---- 312
R+ +++ Y + D A A+FREM
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 313 ------------------QIIRL---------KPDKFILVALLTGCAQLGALEQGKWIHG 345
+ ++L PD + + A+L CA+ L++GK +H
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+I EN + D V+ AL++MYAKCG +++A +F E+R KD SW +II G + N N+
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 406 ALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFN-TMTEVYQIQPKLEHYGC 463
AL LF+ ++ PD+ T VL AC+ D+GR M Y + +
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--S 539
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK-- 521
L+D+ + G L A L I +++ + + +++ YG G++ AL +
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKD----LVSWTVMIAG---YGMHGFGKEAIALFNQMR 592
Query: 522 ---IESKDSSFHTLL 533
IE+ + SF +LL
Sbjct: 593 QAGIEADEISFVSLL 607
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 167/400 (41%), Gaps = 67/400 (16%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
D T+ S L C K+L+ GKE+ +I GN +
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIR---------GNGFV----------------- 126
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+ N+ S++ Y NCG L++A +FD + + W ++N + F ++ L
Sbjct: 127 --IDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F++M ++ D + + + L ++ G+ +HG+I ++ V +L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
++ A ++F E+ E+D SW SII G NG K L +F QM+ G + D T + V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 429 LSACSHGGLVDEGR---------------RFFNTMTEVYQIQPKLE-------------- 459
+ C+ L+ GR RF NT+ ++Y L+
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 362
Query: 460 -HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
Y +I R GL EA +L ++ E V A+L+ C Y +D G+++
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH-- 420
Query: 519 LEKIESKDSSFHTLLAN----IYASANRWEDVTNVRQKMK 554
E I+ D F ++N +YA ++ V +M+
Sbjct: 421 -EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/613 (33%), Positives = 324/613 (52%), Gaps = 77/613 (12%)
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+++N +I A+ K ++ +F ++ G P+ F + V A +++ G +VHG
Sbjct: 171 VSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGA 230
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
VV+TG E D + N+++DMY LG I +F++MP DVVSWN ISG V A
Sbjct: 231 VVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRA 290
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLD 232
+++ +M+ L+P+ T+ S L AC LG++IH ++ + + +F + L+D
Sbjct: 291 LELLLQMKSS-GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVD 349
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF------------DR 280
MY K G L +AR++FD MP +++I W +++SG + G+ + LF +R
Sbjct: 350 MYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNR 409
Query: 281 SPVRDIVLWTA-----------------------------MINGYVQFNRFDEAVALFRE 311
+ + ++ TA +I+ Y + + D A+ +F+E
Sbjct: 410 TTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Query: 312 -----------------------------MQIIR--LKPDKFILVALLTGCAQLGALEQG 340
+Q++R L+PD F+L +LL C L A EQG
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K +H ++ + + T D AL+ YAKCG IE A F L E+ SW+++I GLA +
Sbjct: 530 KQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQH 589
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G +AL+LF +M+ G P+ IT VLSAC+H GLVD+ +++F +M E + I EH
Sbjct: 590 GHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEH 649
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C+ID+LGRAG L++A EL+ +P + N + +GALL A R++ + ++G A L
Sbjct: 650 YACMIDILGRAGKLEDAMELVNNMPFQANAAV---WGALLGASRVHRDPELGRMAAEKLF 706
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+E + S H LLAN YASA W+++ VR+ MK+ V+K P S +EI +H F+VGD
Sbjct: 707 TLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGD 766
Query: 581 PSHSEMKEIYSML 593
SH ++IY L
Sbjct: 767 KSHPMTRDIYGKL 779
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 219/459 (47%), Gaps = 45/459 (9%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F I PC ++++ L+ A++ G R +LL F +R RGV + F P V K
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCA-- 113
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM----PDKDVVS 156
+V+ G +VH V T L D +V N+++ +YG G + +++FDE +++ VS
Sbjct: 114 -PDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVS 172
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RY 215
WN IS +VK + DA+ VFR M P+E ++ACT ++LE G+++H
Sbjct: 173 WNTMISAYVKNDQSGDAIGVFREMVWSGE-RPNEFGFSCVVNACTGSRDLEAGRQVHGAV 231
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ E NAL+DMY K G + A +F++MP +V+ W + +SG V G +
Sbjct: 232 VRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHR-- 289
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
A+ L +M+ L P+ F L ++L CA G
Sbjct: 290 -----------------------------ALELLLQMKSSGLVPNVFTLSSVLKACAGAG 320
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
A G+ IHG++ + D VA L++MYAK G ++ A ++F + +D W ++I
Sbjct: 321 AFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALIS 380
Query: 396 GLAMNGKINKALELFSQMISGGAKPD--DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
G + +G+ + L LF +M G D T VL + + + R+ + + E
Sbjct: 381 GCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQ-VHALAEKIG 439
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
+ LID + G LD A ++ ++ + +++II
Sbjct: 440 LLSDSHVINGLIDSYWKCGQLDYAIKVFKE--SRSDDII 476
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 201/452 (44%), Gaps = 51/452 (11%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G +H +++K+GL N ++ +Y + +FDE+PD VSW+ ++ +
Sbjct: 23 GAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK---NLELGKEIHRY-INQELEF 222
DA+ FR MR G + + LK ++ G ++H + L
Sbjct: 81 NGMPRDALLAFRAMR-------GRGVPCNEFALPVVLKCAPDVRFGAQVHALAVATRLVH 133
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ +Y G + EAR +FDE YV G
Sbjct: 134 DVFVANALVAVYGGFGMVDEARRMFDE---------------YVGVGG------------ 166
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R+ V W MI+ YV+ ++ +A+ +FREM +P++F ++ C LE G+
Sbjct: 167 ERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQ 226
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+HG + D A AL++MY+K G IE A +F ++ D SW + I G +G
Sbjct: 227 VHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGH 286
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
++ALEL QM S G P+ T VL AC+ G + GR+ M + + G
Sbjct: 287 DHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG 346
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
L+D+ + G LD+A ++ +P + + L+ AL+S C G GE L +L ++
Sbjct: 347 -LVDMYAKHGFLDDARKVFDFMPRRD----LILWNALISGCSHDGR--HGEVL-SLFHRM 398
Query: 523 ESKDSSF---HTLLANIYASANRWEDVTNVRQ 551
+ T LA++ S E + + RQ
Sbjct: 399 RKEGLDLDVNRTTLASVLKSTASSEAICHTRQ 430
>gi|413925246|gb|AFW65178.1| hypothetical protein ZEAMMB73_703358 [Zea mays]
Length = 572
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 319/567 (56%), Gaps = 35/567 (6%)
Query: 16 LQQNPETLNKLMVFCTHPSHGNLLYAEK--IFGSIQSPCLLAYNLLIKAFAKKGSFRKSL 73
++++P+ L +++ PSH L A F S +NLLI+A A S R S
Sbjct: 20 IRRSPDYLRRIIPHL--PSHPKLAAAVSSLYFPLFPSSATFLHNLLIRASAASPSPRLSF 77
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK-GEKVHGYVVKTGLEFDTYVCNSIMDM 132
FS L G PD+FT+P + K+ + G +VH + GL D + NS++ M
Sbjct: 78 AAFSSLLRSGHLPDHFTFPPLAKSASKFPSFPRTGAQVHAQAARRGLLADAFAVNSLLAM 137
Query: 133 YGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP--D 189
Y L +++ + + + DVVSWN ++G+ +C +A R+ + MP +
Sbjct: 138 YAALRDAASMRGVLESCAEAADVVSWNTVVAGYARCGELGNA-------RRAFDGMPRRN 190
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG------NALLDMYCKCGCLSEA 243
+ + + A A L++ +++ + P G N+++ + G L A
Sbjct: 191 GASWSAMVGAYAAAGQLDVARDM-------FDRAPAAGRSVVTWNSMVAGLARHGLLPLA 243
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R++FDEMP +N++ W +MV GY G ++ AR+LFD P +D+V WT M++GY + R
Sbjct: 244 RKMFDEMPARNLVSWNAMVRGYAVNGDVDGARELFDAMPEKDVVSWTCMVSGYARAGRHA 303
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV--VATA 361
+A+ LFR MQ ++P++ +V++ + CA+L AL++G+W H +I + + +D + A
Sbjct: 304 QALELFRTMQSGDVRPNEVTMVSVFSACARLAALKEGRWAHAFIGKRGMVLDDGFNLGAA 363
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MYAKCG + A ++F L K+ ++W ++I GLA NG + +++F QM KPD
Sbjct: 364 LIDMYAKCGRPDVAAKVFRSLDRKNVSAWNALIAGLAANGDARRCIDVFEQMKVSDEKPD 423
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+TF+ VL+AC+ GLVDEGRR F +M+ + +QP+L+HYGC++DLLGRAGL+DEAEEL+
Sbjct: 424 SVTFVSVLAACARAGLVDEGRRCFRSMSSGFGVQPELKHYGCMVDLLGRAGLVDEAEELV 483
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT--LLANIYAS 539
R +P ++ ++ LL ACR+ D+ E++ ++ + +K S + +++++ A+
Sbjct: 484 RGMPMAPDDKVL---ATLLGACRVRRRPDVAERVRRRIQSLNTKQPSRESYFMISDVRAT 540
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSS 566
A+RW + M + + K+ G S
Sbjct: 541 ADRWAVALKAKGFMHKYNIMKLDGSGS 567
>gi|255564351|ref|XP_002523172.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537579|gb|EEF39203.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 208/565 (36%), Positives = 322/565 (56%), Gaps = 24/565 (4%)
Query: 23 LNKLMVFCTHP-----SHGNLLYAEKIFG-SIQSPCLLA-----YNLLIKAFAKKGSFRK 71
L+K+++F +H L + ++I +I + CL+ +N LI+A++K + K
Sbjct: 7 LHKILLFLNQGRVRVGAHYYLQFLDQILTQTIITTCLVTHPTSTWNCLIRAYSKTHTPIK 66
Query: 72 SLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
S+L+ + E G PD +TYP + A L G+ VH +++K GL+ D YV N+++
Sbjct: 67 SILVSNYFIELGSFYPDRYTYPLLLNACSRLSFASMGQLVHTHLIKIGLDSDIYVQNALL 126
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSI-SGHVKCMRFEDAVDVFRRM-RQGCNLMP 188
YG + ++ + LFD+M ++D+ SWN + + + D +D+F+R+ +G
Sbjct: 127 HFYGSIKQLNYARLLFDKMYERDITSWNTFMGASYASSNSVIDLMDLFKRLISEGVG--A 184
Query: 189 DEGTVVSTLSACTALK---NLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEAR 244
D+ T+V SA + +LE G +H I L + NALL+MY K + A
Sbjct: 185 DKITLVILFSAFAQAQCDESLEYGTAVHSCAIKMGLVSMLNVSNALLNMYTKYRQMDAAS 244
Query: 245 ELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+FDEM K+ + +++GYV G ++ A D+F + +D+VLW M++GY++ R
Sbjct: 245 RVFDEMGSKKDAVSHAILINGYVEKGLIDLASDIFYQIFDKDLVLWNVMLHGYIKAKRPI 304
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
+A+ LF++M L PD+ +V +L CA L L+ G+ +H +IN N I D V TALI
Sbjct: 305 DALELFKKMDNEGLIPDENTMVGILAACASLSDLQYGRVVHMFINRNDIKQDIFVKTALI 364
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MY KCG E+AL FY++ KD +WT++I GLA NG N AL LF QM G +P++
Sbjct: 365 DMYFKCGSPEEALVTFYKMEYKDVFTWTAVIEGLANNGYGNVALNLFKQMEEQGIQPNEA 424
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF+ L++C H GLV EG + F M EVY++QP+ EH+GCLID+L RAGLL +A E ++
Sbjct: 425 TFVSALTSCRHSGLVKEGCQMFRKMVEVYKLQPRFEHFGCLIDVLSRAGLLAQAYEFVKL 484
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+ E + Y +LSAC Y D+GEK A + ++ + H LL+N YA A +W
Sbjct: 485 LRPEER---LAAYKIVLSACIKYLEFDVGEKAALEMAELSPQSCEMHILLSNFYALAGQW 541
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIE 568
E V R+ MK + RK PG SS E
Sbjct: 542 ERVAKTRRTMKRLNTRKEPGISSGE 566
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 324/595 (54%), Gaps = 42/595 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ A + + G ++ T N L+ + G++ A +FG + ++++N I
Sbjct: 222 RKVHAMVIRTGYDKDVFTANALVDM--YSKLGDIRMAAVVFGKVPETDVVSWNAFISGCV 279
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G + +L L +++ G+ P+ FT + KA G G ++HG++VK + D Y
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNY 339
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QG 183
+ ++DMY G + + KK+FD +P +D+V WN ISG + +A+ +F RMR +G
Sbjct: 340 IAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEG 399
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMYCKCGCLS 241
++ + T+ + L + +L+ + +++H + ++L F + N L+D Y KC CL+
Sbjct: 400 FDV--NRTTLAAVLKSTASLEAISDTRQVHA-LAEKLGFLSDSHVVNGLIDSYWKCDCLN 456
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
A +F ++ DI+ +T+MI Q +
Sbjct: 457 YAYRVF-------------------------------EKHGSYDIIAFTSMITALSQCDH 485
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
++A+ LF EM L PD F+L +LL CA L A EQGK +H ++ + + D A
Sbjct: 486 GEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNA 545
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L+ YAKCG IE A F L EK SW+++I GLA +G +AL++F +M+ P+
Sbjct: 546 LVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPN 605
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
IT VL AC+H GLVDE +R+FN+M E++ I+ EHY C+IDLLGRAG LD+A EL+
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELV 665
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+P + N + +GALL+A R++ + ++G A L +E + S H LLAN YASA
Sbjct: 666 NSMPFQTNAAV---WGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAG 722
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
W+DV VR+ MK+ V+K P S +E+ +H F+VGD SH ++IY+ LD +
Sbjct: 723 MWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDEL 777
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 219/481 (45%), Gaps = 57/481 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q I A + + GL N L+ F C P A ++F I PC ++++
Sbjct: 20 LLQGAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGS-----ARRVFDEIPDPCHVSWS 72
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
L+ A++ R +L F +R V + F P V K + G ++H + T
Sbjct: 73 SLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAP---DAGFGTQLHALAMAT 129
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP-DKDVVSWNVSISGHVKCMRFEDAVDV 176
GL D +V N+++ MYG G + + +FDE +++ VSWN +S +VK R AV V
Sbjct: 130 GLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKV 189
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYC 235
F M G + P+E ++ACT ++LE G+++H I + NAL+DMY
Sbjct: 190 FGEMVWG-GVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYS 248
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G + A +F ++P +V+ W + +SG V ++G
Sbjct: 249 KLGDIRMAAVVFGKVPETDVVSWNAFISGCV--------------------------LHG 282
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+ Q A+ L +M+ L P+ F L ++L CA GA G+ IHG++ + D
Sbjct: 283 HDQ-----HALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSD 337
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+A L++MYAK GL++ A ++F + ++D W ++I G + + +AL LF +M
Sbjct: 338 NYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRK 397
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G + T VL + + +++ Q+ E G L D GL+D
Sbjct: 398 EGFDVNRTTLAAVLKSTAS----------LEAISDTRQVHALAEKLGFLSDSHVVNGLID 447
Query: 476 E 476
Sbjct: 448 S 448
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/508 (23%), Positives = 233/508 (45%), Gaps = 45/508 (8%)
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+++N L+ A+ K ++ +F ++ GV P+ F + V A +++ G KVH
Sbjct: 168 VSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAM 227
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
V++TG + D + N+++DMY LG I +F ++P+ DVVSWN ISG V + A
Sbjct: 228 VIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHA 287
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLD 232
+++ +M+ L+P+ T+ S L AC LG++IH + + + + L+D
Sbjct: 288 LELLLQMKSS-GLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVD 346
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY K G L +A+++FD +P ++++ W +++SG + Q
Sbjct: 347 MYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQ---------------------- 384
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
EA++LF M+ ++ L A+L A L A+ + +H +
Sbjct: 385 ---------HAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGF 435
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
D+ V LI+ Y KC + A +F + D ++TS+I L+ A++LF +
Sbjct: 436 LSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFME 495
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M+ G PD +L+AC+ ++G++ + + Q + L+ + G
Sbjct: 496 MLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDVFAGNALVYTYAKCG 554
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK-IESKDSSFHT 531
+++A+ +P + V + A++ +G+ G++ + + ++ S H
Sbjct: 555 SIEDADLAFSGLPEKG----VVSWSAMIGGLAQHGH---GKRALDVFHRMVDEHISPNHI 607
Query: 532 LLANIYASANRWEDVTNVRQ---KMKEM 556
+ ++ + N V ++ MKEM
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEM 635
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 199/448 (44%), Gaps = 46/448 (10%)
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+G +H +++K+GL F + N ++ Y + +++FDE+PD VSW+ ++ +
Sbjct: 22 QGAHIHAHLLKSGL-FAVFR-NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYS 79
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP 224
DA+ FR MR C++ +E V+ + C + G ++H + L
Sbjct: 80 NNAMPRDALGAFRSMRS-CSVRCNE-FVLPVVLKCA--PDAGFGTQLHALAMATGLGGDI 135
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ NAL+ MY G + EAR +FDE +N + W ++S
Sbjct: 136 FVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMS-------------------- 175
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
YV+ +R AV +F EM ++P++F ++ C LE G+ +
Sbjct: 176 -----------AYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKV 224
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H + D A AL++MY+K G I A +F ++ E D SW + I G ++G
Sbjct: 225 HAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHD 284
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
ALEL QM S G P+ T +L AC+ G + GR+ M + +G
Sbjct: 285 QHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG- 343
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
L+D+ + GLLD+A+++ IP + + L+ AL+S C E L+ +
Sbjct: 344 LVDMYAKHGLLDDAKKVFDWIPQRD----LVLWNALISGCS--HGAQHAEALSLFCRMRK 397
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQ 551
T LA + S E +++ RQ
Sbjct: 398 EGFDVNRTTLAAVLKSTASLEAISDTRQ 425
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 314/544 (57%), Gaps = 44/544 (8%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
++K+F I ++++N +I +F+ +G + +L +F + + G+ P++ T + +G
Sbjct: 295 SKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGE 354
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
LG K G +VHG+ +K +E D ++ NS++DMY G +F++M +++VSWN
Sbjct: 355 LGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAM 414
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
I+ + +AV++ R+M Q P+ T + L AC L L +GKEIH R I
Sbjct: 415 IANFARNRLEYEAVELVRQM-QAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVG 473
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ NAL DMY KCGCL+ A+++F+
Sbjct: 474 SSLDLFVSNALTDMYSKCGCLN-------------------------------LAQNVFN 502
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
S VRD V + +I GY + N E++ LF EM+++ ++PD + +++ CA L + Q
Sbjct: 503 IS-VRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQ 561
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK IHG + VA +L+++Y +CG I+ A ++FY ++ KD ASW ++I G M
Sbjct: 562 GKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGM 621
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
G+++ A+ LF M G + D ++F+ VLSACSHGGL+++GR++F M ++ I+P
Sbjct: 622 RGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDL-NIEPTHT 680
Query: 460 HYGCLIDLLGRAGLLDEAEELIRK---IPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
HY C++DLLGRAGL++EA +LIR IP+ N ++GALL ACRI+GN+++G A
Sbjct: 681 HYACMVDLLGRAGLMEEAADLIRGLSIIPDTN------IWGALLGACRIHGNIELGLWAA 734
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
L +++ + ++ LL+N+YA A RW++ VR+ MK G +K PGCS +++ ++H F
Sbjct: 735 EHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAF 794
Query: 577 LVGD 580
LVG+
Sbjct: 795 LVGE 798
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 230/490 (46%), Gaps = 49/490 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVF----CTHPSHGNLLYAEKIFGSIQSPCLLAY 56
++Q KQ+ A G +L ++ HPS+ LL+ + S +
Sbjct: 50 LSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSV---AYSRSAFLW 106
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N LI+A + G F ++ + GV PD TYPFV K EV+KG +VHG K
Sbjct: 107 NTLIRANSIAGVF-DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFK 165
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G + D +V N+++ YG G + K+FDEMP++D VSWN I +E+A+
Sbjct: 166 LGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGF 225
Query: 177 FRRMRQG-CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDM 233
FR M + PD TVVS L C ++ + + +H Y + L +GNAL+D+
Sbjct: 226 FRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDV 285
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA-RDLFDRSPVRDIVLWTAM 292
Y KCG EKA + +FD R+++ W A+
Sbjct: 286 YGKCGS--------------------------------EKASKKVFDEIDERNVISWNAI 313
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I + ++ +A+ +FR M ++P+ + ++L +LG + G +HG+ + I
Sbjct: 314 ITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAI 373
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
D ++ +LI+MYAK G A IF ++ ++ SW ++I A N +A+EL Q
Sbjct: 374 ESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQ 433
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDLLGR 470
M + G P+++TF VL AC+ G ++ G+ + ++ L+ + L D+ +
Sbjct: 434 MQAKGETPNNVTFTNVLPACARLGFLNVGKEIH---ARIIRVGSSLDLFVSNALTDMYSK 490
Query: 471 AGLLDEAEEL 480
G L+ A+ +
Sbjct: 491 CGCLNLAQNV 500
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 182/378 (48%), Gaps = 35/378 (9%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ G+ A IF + ++++N +I FA+ +++ L +++ +G +P+N T+
Sbjct: 387 YAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTF 446
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V A LG + G+++H +++ G D +V N++ DMY G + + +F+ +
Sbjct: 447 TNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISV 505
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+D VS+N+ I G+ + +++ +F MR + PD + + +SAC L + GKE
Sbjct: 506 RDEVSYNILIIGYSRTNDSLESLRLFSEMRL-LGMRPDIVSFMGVVSACANLAFIRQGKE 564
Query: 212 IHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH + ++L T + + N+LLD+Y +CG + A ++F + NK+V W +M+ GY G+
Sbjct: 565 IHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGE 624
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
L D A+ LF M+ ++ D VA+L+
Sbjct: 625 L-------------------------------DTAINLFEAMKEDGVEYDSVSFVAVLSA 653
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAAS 389
C+ G +E+G+ + + I ++++ + GL+E+A ++ L D
Sbjct: 654 CSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNI 713
Query: 390 WTSIICGLAMNGKINKAL 407
W +++ ++G I L
Sbjct: 714 WGALLGACRIHGNIELGL 731
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 340/601 (56%), Gaps = 61/601 (10%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
NL A K+F I + ++ +LI FA+ G L LF+K++++GV P+ FT V K
Sbjct: 336 NLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLK 395
Query: 97 AVGW-LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ + + + G+ +HG++++ GL+ D + NSI+D Y +KLF M +KD V
Sbjct: 396 SCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTV 455
Query: 156 SWNVSISGHVKCMRFEDAVDVFRR----------------MRQGCNLMP----------- 188
SWN+ +S +++ + +VD+FR+ MR GC +
Sbjct: 456 SWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAG 515
Query: 189 ---DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI----MGNALLDMYCKCGCLS 241
++ T L ++L L LGK+IH Q L+ + + N+L+DMYCKCG +
Sbjct: 516 PAFNKLTFSIALVLASSLSVLGLGKQIH---TQVLKVGVLDDGFVRNSLIDMYCKCGEME 572
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+A +F +P + +SM++ +C V + V W++M++GYVQ R
Sbjct: 573 KASVIFKHLPQE-----SSMMNSEESCDD-----------AVVESVSWSSMVSGYVQNGR 616
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
F++A+ F M +++ DKF L ++++ CA G LE G+ +HGYI + +D + ++
Sbjct: 617 FEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSS 676
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
+I+MY KCG + A IF + ++++ WTS+I G A++G+ +A+ LF MI+ G P+
Sbjct: 677 IIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPN 736
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+++F+GVL+ACSH GL++EG ++F M EVY I+P EH+ C++DL GRAG L+E +E I
Sbjct: 737 EVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFI 796
Query: 482 RKIPNENNEI--IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
NN I + ++ + LS+CR++ N++MG + L ++E D+ + L ++I A+
Sbjct: 797 -----HNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICAT 851
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
+RWE+ +R M++ GV+K P S I++ +H F++GD SH + +IYS LD +
Sbjct: 852 EHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGR 911
Query: 600 L 600
L
Sbjct: 912 L 912
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 245/533 (45%), Gaps = 63/533 (11%)
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LL F+ F L FS D+ YP E +H ++K
Sbjct: 276 LLFLGFSLSSYFYPPLXYFSS-----TFSDSMNYP-------------NSEVLHAKLIKN 317
Query: 118 GLEFDTYVC-----NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
G C N ++++Y + K+F+E+P DV SW V ISG + D
Sbjct: 318 G-------CVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSAD 370
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTA-LKNLELGKEIHRYI-NQELEFTPIMGNAL 230
+ +F +M Q + P++ T+ L +C++ + + +GK IH +I L+ ++ N++
Sbjct: 371 VLGLFTKM-QDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSI 429
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
LD Y KC C A +LF M K+ + W M+S Y+ G ++K+ DLF + P +D W
Sbjct: 430 LDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWN 489
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
MI+G ++ A+ L +M +K L + L L GK IH + +
Sbjct: 490 TMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKV 549
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREK---------------DAASWTSIIC 395
+ D V +LI+MY KCG +EKA IF L ++ ++ SW+S++
Sbjct: 550 GVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVS 609
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G NG+ AL+ FS MI + D T V+SAC+ G+++ GR+ + +I
Sbjct: 610 GYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGY---IQKIG 666
Query: 456 PKLEHY--GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
L+ + +ID+ + G L++A + + + N V L+ +++S C ++G
Sbjct: 667 HGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRN----VVLWTSMISGCALHGQGREAV 722
Query: 514 KLAALL--EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM-GVRKVPG 563
+L L+ E I + SF +L + A E+ + M+E+ G+R PG
Sbjct: 723 RLFELMINEGITPNEVSFVGVLTAC-SHAGLLEEGCKYFRLMREVYGIR--PG 772
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 186/399 (46%), Gaps = 52/399 (13%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
GL +T++ ++ ++ G++ + +F + ++N +I + G R +L
Sbjct: 447 GLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALE 506
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
L K+ G + + T+ L + G+++H V+K G+ D +V NS++DMY
Sbjct: 507 LLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYC 566
Query: 135 VLGKICNVKKLFDEMPDK---------------DVVSWNVSISGHVKCMRFEDAVDVFRR 179
G++ +F +P + + VSW+ +SG+V+ RFEDA+ F
Sbjct: 567 KCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSF 626
Query: 180 MRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC 237
M C+ + D+ T+ S +SAC + LELG+++H YI + +G++++DMY KC
Sbjct: 627 MI--CSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKC 684
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G L++A +F++ ++NV+ WTSM+SG C + R
Sbjct: 685 GSLNDAWLIFNQAKDRNVVLWTSMISG---CALHGQGR---------------------- 719
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDA 356
EAV LF M + P++ V +LT C+ G LE+G K+ I A
Sbjct: 720 ------EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGA 773
Query: 357 VVATALIEMYAKCGLIEKALEIFY-ELREKDAASWTSII 394
T ++++Y + G + + E + K ++ W S +
Sbjct: 774 EHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFL 812
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 25/279 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM--------------VFCTHPSHGNLLYAEKIFGSIQS 50
KQI Q+ ++G+ + N L+ +F P +++ +E+ S
Sbjct: 540 KQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEE---SCDD 596
Query: 51 PCL--LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGE 108
+ ++++ ++ + + G F +L FS + V D FT V A G ++ G
Sbjct: 597 AVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGR 656
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+VHGY+ K G D ++ +SI+DMY G + + +F++ D++VV W ISG
Sbjct: 657 QVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHG 716
Query: 169 RFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG 227
+ +AV +F M +G + P+E + V L+AC+ LE G + R + + P
Sbjct: 717 QGREAVRLFELMINEG--ITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAE 774
Query: 228 N--ALLDMYCKCGCLSEARE-LFDEMPNKNVICWTSMVS 263
+ ++D+Y + G L+E +E + + +K W S +S
Sbjct: 775 HFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLS 813
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/570 (34%), Positives = 323/570 (56%), Gaps = 44/570 (7%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G+L A K+F + ++ + L+I F + G R ++ LF + G PD FT V
Sbjct: 92 NGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGV 151
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG---VLGKICNVKKLFDEMPD 151
A +G + G + H V+K+GL+ D V S++DMY G + + +K+FD MP
Sbjct: 152 VSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV 211
Query: 152 KDVVSWNVSISGHVK---CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+V+SW I+G+V+ C R +A+++F M QG + P+ T S L AC L ++ L
Sbjct: 212 HNVMSWTAIITGYVQSGGCDR--EAIELFLEMVQG-QVKPNHFTFSSVLKACANLSDIWL 268
Query: 209 GKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G++++ + L +GN+L+ MY +
Sbjct: 269 GEQVYALVVKMRLASINCVGNSLISMYSR------------------------------- 297
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
CG +E AR FD +++V + ++N Y + +EA LF E++ + F +L
Sbjct: 298 CGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASL 357
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+G + +GA+ +G+ IH I ++ + + ALI MY++CG IE A ++F E+ + +
Sbjct: 358 LSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNV 417
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SWTS+I G A +G +ALE F +M+ G P+++T+I VLSACSH GL+ EG + F +
Sbjct: 418 ISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKS 477
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
M + I P++EHY C++DLLGR+G L+EA EL+ +P + + +++ + L ACR++G
Sbjct: 478 MKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTF---LGACRVHG 534
Query: 508 NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
N+D+G+ A ++ + + D + + LL+N++ASA +WE+V +R+KMKE + K GCS I
Sbjct: 535 NMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWI 594
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
E+ +H+F VGD SH + +EIY LD++A
Sbjct: 595 EVENKVHKFYVGDTSHPQAQEIYDELDQLA 624
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 221/442 (50%), Gaps = 38/442 (8%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
L++++ LI +A +++ F + E G P+ + + VF+A + G+ + G
Sbjct: 7 LVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFG 66
Query: 113 YVVKTG-LEFDTYVCNSIMDMY-GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
+++KTG E D V +++DM+ G + + K+FD MPD++VV+W + I+ +
Sbjct: 67 FLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFS 126
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNA 229
DAVD+F M +PD T+ +SAC + L LG++ H + + L+ +G +
Sbjct: 127 RDAVDLFLDMVLS-GYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCS 185
Query: 230 LLDMYCKC---GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
L+DMY KC G + +AR++FD MP NV+ WT++++GYV G ++
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDR------------- 232
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
EA+ LF EM ++KP+ F ++L CA L + G+ ++
Sbjct: 233 -----------------EAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYAL 275
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
+ + R+ V +LI MY++CG +E A + F L EK+ S+ +I+ A + +A
Sbjct: 276 VVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEA 335
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
ELF+++ G + TF +LS S G + +G + + + + + L LI
Sbjct: 336 FELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKS-GFKSNLHICNALIS 394
Query: 467 LLGRAGLLDEAEELIRKIPNEN 488
+ R G ++ A ++ ++ + N
Sbjct: 395 MYSRCGNIEAAFQVFNEMGDGN 416
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 71/462 (15%)
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+D+VSW+ IS + + +A+ F M + C P+E AC+ +N+ LGK
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLE-CGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 212 IHRYINQE--LEFTPIMGNALLDMYCKC-GCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
I ++ + E +G AL+DM+ K G L A ++FD MP++NV+ WT M++ +
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G A DLF D+VL +GYV PD+F L ++
Sbjct: 124 GFSRDAVDLF-----LDMVL-----SGYV---------------------PDRFTLSGVV 152
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC---GLIEKALEIFYELREK 385
+ CA++G L G+ H + ++ + +D V +L++MYAKC G ++ A ++F +
Sbjct: 153 SACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH 212
Query: 386 DAASWTSIICGLAMNGKINK-ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
+ SWT+II G +G ++ A+ELF +M+ G KP+ TF VL AC++ + G +
Sbjct: 213 NVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQV 272
Query: 445 F---------------NTMTEVYQ---------------IQPKLEHYGCLIDLLGRAGLL 474
+ N++ +Y + L Y +++ ++
Sbjct: 273 YALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNS 332
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+EA EL +I + + +LLS G + GE++ + + K K S+ H A
Sbjct: 333 EEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFK-SNLHICNA 391
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
I + +R ++ Q EMG V +S+ H F
Sbjct: 392 LI-SMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGF 432
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
++D SW+++I A N K +A+ F M+ G P++ F GV ACS+ + G+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRA-GLLDEAEELIRKIPNEN 488
F + + + + LID+ + G L+ A ++ ++P+ N
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRN 109
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/414 (41%), Positives = 268/414 (64%), Gaps = 7/414 (1%)
Query: 188 PDEGTVVSTLSACTALKNL--ELGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEA 243
P+ T ++ LS C L + LG +H Y + L+ +M G AL+DMY KCG + +
Sbjct: 8 PNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVELS 67
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R FDE+ KN W +M+ G+V G++ +A ++FD P R ++ WT +ING+V+ F+
Sbjct: 68 RLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFE 127
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ FR+MQ+ +++PD+ +V +L+ CA LGAL G W+H Y + + + + +LI
Sbjct: 128 EALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNSLI 187
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
++Y++CG IE A ++F ++ E+ SW SII GLA NG +ALE F M G KP+D+
Sbjct: 188 DLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPNDV 247
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+F G L+ACSH GLVDEG ++F+ M V++I P++EHYGC++DL RAG L++A +++
Sbjct: 248 SFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQN 307
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + NE++V G+LL+ACR G+V++ E+L L ++ S + LL+NIYA+ RW
Sbjct: 308 MPMKPNEVVV---GSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAAVGRW 364
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ R MK +G++K PG SSIEI IHEF+ GD SH + ++IYSML+ ++
Sbjct: 365 DGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSMLELLS 418
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 40/282 (14%)
Query: 112 GYVVKTGLEFD------TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
G+V + L FD ++ N+++D + GKI ++FDEMP++ V+SW V I+G V
Sbjct: 62 GHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFV 121
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP 224
K FE+A++ FR+M Q + PD T+V+ LSAC L L LG +HRY + + L
Sbjct: 122 KMGLFEEALEWFRKM-QVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNV 180
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+ N+L+D+Y +CG + AR++F++M + ++ W S++ G G E+A + FD
Sbjct: 181 KICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDL---- 236
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWI 343
MQ KP+ LT C+ G +++G K+
Sbjct: 237 ---------------------------MQKQGFKPNDVSFTGALTACSHTGLVDEGLKYF 269
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++I+ ++++Y++ G +E A+ + + K
Sbjct: 270 DIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMK 311
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 16/254 (6%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G + A ++F + ++++ +LI F K G F ++L F K++ V PD T V
Sbjct: 92 NGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTV 151
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + G VH Y +K GL + +CNS++D+Y G I +++F++M ++ +
Sbjct: 152 LSACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKMGERTL 211
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACT-------ALKNL 206
VSWN I G E+A++ F M +QG P++ + L+AC+ LK
Sbjct: 212 VSWNSIIGGLAANGFTEEALEHFDLMQKQG--FKPNDVSFTGALTACSHTGLVDEGLKYF 269
Query: 207 ELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGY 265
++ + +H+ I+ +E ++D+Y + G L +A + MP K N + S+++
Sbjct: 270 DIMERVHK-ISPRIEHY----GCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVVGSLLAAC 324
Query: 266 VNCGQLEKARDLFD 279
G +E A L +
Sbjct: 325 RTRGDVELAERLMN 338
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 136/310 (43%), Gaps = 70/310 (22%)
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQ--GKWIHGYINENRI-TVDAVVATALIEMYAK 368
M+++ + P+ + LL+GCA L + G +H Y + + T + +V TAL++MYAK
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG----------- 417
CG +E + F EL+ K++ SW ++I G NGKI +A+E+F +M G
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 418 --------------------AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+PD +T + VLSAC++ G + G + + ++
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLG-LWVHRYALKKGLRDN 179
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NEII--------------------- 492
++ LIDL R G ++ A ++ K+ N II
Sbjct: 180 VKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQK 239
Query: 493 -------VPLYGALLSACRIYGNVDMGEKLAALLEKIE--SKDSSFHTLLANIYASANRW 543
V GA L+AC G VD G K ++E++ S + + ++Y+ A R
Sbjct: 240 QGFKPNDVSFTGA-LTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRL 298
Query: 544 EDVTNVRQKM 553
ED +V Q M
Sbjct: 299 EDAMSVVQNM 308
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 330/593 (55%), Gaps = 44/593 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F S+ ++ +N +I + + G ++++ +F +R G+ P T A
Sbjct: 1331 ARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASAN 1390
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L + +G++ H + L+ D + +SI++ Y +G I + + +F M +KDVV+WN+
Sbjct: 1391 LDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLL 1450
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
IS +V+ + A+++ MR NL D T+ S LSA N++LGKE H Y I +
Sbjct: 1451 ISSYVQHHQVGKALNMCHLMRSE-NLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN 1509
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK-------------------------- 253
LE ++ N+++DMY KC + +AR++FD +
Sbjct: 1510 LESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFY 1569
Query: 254 ---------NVICWTSMVSGYVNCGQLEKARDLFDRSPV----RDIVLWTAMINGYVQFN 300
NVI W S++ G++ GQ+ +A+D+F + +++ WT +I+G Q
Sbjct: 1570 QMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSG 1629
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ F++MQ ++P + ++L C + +L G+ IHG+I + + VAT
Sbjct: 1630 FGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVAT 1689
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
+L++MYAKCG I++A ++F+ + K+ + ++I A++G+ +AL LF + G +P
Sbjct: 1690 SLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEP 1749
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D ITF +LSACSH GLV+EG F M + + P +EHYGC++ LL R G LDEA L
Sbjct: 1750 DSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRL 1809
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I +P + + I+ G+LL+ACR + +++GE L+ L K+E +S + L+N YA+A
Sbjct: 1810 ILTMPFQPDAHIL---GSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAA 1866
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
RW +V+N+R MK G+RK PGCS I+ G ++ F+ GD SH + +EIY+ML
Sbjct: 1867 GRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAML 1919
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 169/608 (27%), Positives = 280/608 (46%), Gaps = 120/608 (19%)
Query: 5 KQIQAQIFQIG--LQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+QI A+I + G +N KL+VF C P A ++F ++ + ++ +
Sbjct: 1194 QQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPE-----VAVRLFHRLRVRNVFSWAAI 1248
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ + G +LL F +++E GV PDNF P V KA G L + G+ VHGYV+K G
Sbjct: 1249 VGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGF 1308
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+V +S++DMYG G + + +K+FD M +K+VV+WN I G+V+ ++A+DVF
Sbjct: 1309 GACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYD 1368
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG 238
MR + P TV S LSA L L GK+ H I L+ I+G+++++ Y K G
Sbjct: 1369 MRVE-GIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVG 1427
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ E A +F R +D+V W +I+ YVQ
Sbjct: 1428 LI-------------------------------EDAELVFSRMLEKDVVTWNLLISSYVQ 1456
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
++ +A+ + M+ L+ D L ++L+ A ++ GK H Y + D VV
Sbjct: 1457 HHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVV 1516
Query: 359 ATALIEMYAKC-------------------------------GLIEKALEIFYELR---- 383
A ++I+MYAKC GL +AL++FY+++
Sbjct: 1517 ANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSV 1576
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ SW S+I G NG++N+A ++FSQM S G +P+ IT+ ++S + G E
Sbjct: 1577 PPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAIL 1636
Query: 444 FFNTMTEVYQIQPKL---------------------------EHYGC--------LIDLL 468
FF M E I+P + H C L+D+
Sbjct: 1637 FFQKMQEA-GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMY 1695
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK--IESKD 526
+ G +DEA+++ + ++ +P+Y A++SA ++G L L+K IE
Sbjct: 1696 AKCGSIDEAKKVFHMMSSKE----LPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDS 1751
Query: 527 SSFHTLLA 534
+F ++L+
Sbjct: 1752 ITFTSILS 1759
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 35 HGNLLYAEKIFGSIQS----PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
+G + A+ +F +QS P L+ + LI A+ G +++L F K++E G+ P +
Sbjct: 1593 NGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIAS 1652
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
V A + + G +HG++ + V S++DMY G I KK+F M
Sbjct: 1653 ITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMS 1712
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
K++ +N IS + + +A+ +F+ + Q + PD T S LSAC+ + G
Sbjct: 1713 SKELPIYNAMISAYALHGQAVEALALFKHL-QKEGIEPDSITFTSILSACSHAGLVNEGL 1771
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
+ + + PIM + ++ + +CG L EA L MP
Sbjct: 1772 NLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMP 1814
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI--NENRITVDAVV 358
E+V L EM+ + I LL GC AL G+ IH I N + + V
Sbjct: 1154 HLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYV 1213
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T L+ YAKC E A+ +F+ LR ++ SW +I+ G AL F +M G
Sbjct: 1214 ETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGV 1273
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC------LIDLLGRAG 472
PD+ VL AC L+ G+ V+ K+ C L+D+ G+ G
Sbjct: 1274 FPDNFVLPNVLKACGSLQLIGLGK-------GVHGYVLKMGFGACVFVSSSLVDMYGKCG 1326
Query: 473 LLDEAEELIRKIPNEN----NEIIV 493
+L++A ++ + +N N +IV
Sbjct: 1327 VLEDARKVFDSMVEKNVVTWNSMIV 1351
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/597 (34%), Positives = 319/597 (53%), Gaps = 40/597 (6%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ + ++G +P + N L+ + G A +F I P ++++N +I
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDM--YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+L L K+ V+P FT KA +G VK G ++H ++K +E D++V
Sbjct: 267 HEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFV 326
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGC 184
++DMY G + + + +FD MP KDV+ WN ISG+ C +A+ +F M ++G
Sbjct: 327 GVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGL 386
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
++ T+ + L + + +++H I ++ + N+LLD Y KC CL
Sbjct: 387 EF--NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKC-CL--- 440
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
LE A +F+ P D+V +T+MI Y Q+ +
Sbjct: 441 ---------------------------LEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGE 473
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ ++ MQ +KPD FI +L CA L A EQGK IH ++ + + D +L+
Sbjct: 474 EALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKCG I+ A IF E+ + SW+++I GLA +G KAL+LF QM+ G P+ I
Sbjct: 534 NMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHI 593
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T + VLSAC+H GLV E RRFF M +++ I P EHY C++D+LGR G LDEA L+++
Sbjct: 594 TLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKE 653
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + + + +GALL A RI+ N+++G A +L +E + S H LLANIYAS W
Sbjct: 654 MPFQASAAV---WGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMW 710
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++V VR+ MK V+K PG S IE+ ++ F+VGD SH KEIY LD + + L
Sbjct: 711 DNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERL 767
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 208/444 (46%), Gaps = 40/444 (9%)
Query: 42 EKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL 101
E F S+ C L NL + G + L +++ G+SP+ F+ V A L
Sbjct: 148 EFTFSSVLKGCSLTRNLEL------GKQIHRVALVTEMISTGISPNEFSLSTVLNACAGL 201
Query: 102 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
+ G KVHGY++K G + D + N+++DMY G +F E+P D+VSWN I
Sbjct: 202 EDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVI 261
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQEL 220
+G V + + A+ + +M + P T+ S L AC A+ ++LG+++H + ++
Sbjct: 262 AGCVLHEKNDLALKLLGKM-GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDM 320
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
E +G L+DMY KCG L + AR +FD
Sbjct: 321 EPDSFVGVGLIDMYSKCGLL-------------------------------QDARMVFDL 349
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P +D+++W ++I+GY EA++LF M L+ ++ L +L A A
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+ +H ++ D VA +L++ Y KC L+E A ++F +D ++TS+I +
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G +AL+++ +M KPD F + +AC++ ++G++ + + +
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529
Query: 461 YGCLIDLLGRAGLLDEAEELIRKI 484
L+++ + G +D+A + +I
Sbjct: 530 -NSLVNMYAKCGSIDDASCIFNEI 552
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 186/428 (43%), Gaps = 87/428 (20%)
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR---------------QGCNLM 187
+KL + + D+VSW+ ISG+V+ R E+A+ + M +GC+L
Sbjct: 102 RKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLT 161
Query: 188 ------------------------PDEGTVVSTLSACTALKNLELGKEIHRY-INQELEF 222
P+E ++ + L+AC L++ G ++H Y I +
Sbjct: 162 RNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDS 221
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
P NALLDMY K GC A +F E+P
Sbjct: 222 DPFSANALLDMYAKSGCPEAAIAVFYEIPKP----------------------------- 252
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
DIV W A+I G V + D A+ L +M R+ P F L + L CA +G ++ G+
Sbjct: 253 --DIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQ 310
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H + + + D+ V LI+MY+KCGL++ A +F + KD W SII G + G
Sbjct: 311 LHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGY 370
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+A+ LF+ M G + + T +L S G G F I+ ++ G
Sbjct: 371 DIEAMSLFTNMYKEGLEFNQTTLSTILK--STAGSQANG---FCEQVHTISIKSGYQYDG 425
Query: 463 ----CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
L+D G+ LL++A ++ P E+ + Y ++++A YG +GE+ +
Sbjct: 426 YVANSLLDSYGKCCLLEDAAKVFEVCPAED----LVAYTSMITAYSQYG---LGEEALKM 478
Query: 519 LEKIESKD 526
+++ +D
Sbjct: 479 YLRMQDRD 486
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 194/409 (47%), Gaps = 43/409 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ + + ++ ++ P++ + + + G L A +F + ++ +N +I ++
Sbjct: 309 RQLHSALMKMDME--PDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYS 366
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG--EKVHGYVVKTGLEFD 122
G +++ LF+ + + G+ + T + K+ G G E+VH +K+G ++D
Sbjct: 367 NCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTA--GSQANGFCEQVHTISIKSGYQYD 424
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
YV NS++D YG + + K+F+ P +D+V++ I+ + + E+A+ ++ RM Q
Sbjct: 425 GYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRM-Q 483
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
++ PD S +AC L E GK+IH ++ KCG LS+
Sbjct: 484 DRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHV------------------LKCGLLSD 525
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
V S+V+ Y CG ++ A +F+ R IV W+AMI G Q
Sbjct: 526 ------------VFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHG 573
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE-NRITVDAVVATA 361
+A+ LF +M + P+ LV++L+ C G + + + G + + IT
Sbjct: 574 RKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYAC 633
Query: 362 LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALEL 409
++++ + G +++A+ + E+ + AA W +++ +I+K +EL
Sbjct: 634 MVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGA----ARIHKNIEL 678
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/531 (36%), Positives = 295/531 (55%), Gaps = 46/531 (8%)
Query: 103 EVKKGEKVHGYV-VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
+ K +K+H + + L + + +M Y G+ C + +FDE+ DK+VV +NV I
Sbjct: 50 DAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMI 109
Query: 162 SGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
+V ++DA+ VF+ M QG PD T L AC+ NL +G +IH +
Sbjct: 110 RSYVNNGLYQDALLVFKTMANQG--FYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLG 167
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA----- 274
L+ +GN L+ MY KC L AR + DEMP ++++ W SMV+GY G+ A
Sbjct: 168 LDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCR 227
Query: 275 --------------------------------RDLFDRSPVRDIVLWTAMINGYVQFNRF 302
+D+F + + ++ W MI YV
Sbjct: 228 EMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMP 287
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+EAV L+ +MQ+ ++PD + ++L C L A G+ IH Y+ ++ + ++ AL
Sbjct: 288 NEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENAL 347
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MYAKCG +++A +F ++ +D SWTS+I M+G+ A+ LF +M G PD
Sbjct: 348 IDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDW 407
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
I F+ VL+ACSH GLVDEGR FN M E Y I P +EHY C++DLLGRAG +DEA L R
Sbjct: 408 IAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEAYHLTR 466
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P E NE + +G+LLSACR+Y ++++ A L ++ + S ++ LL+NIYA A R
Sbjct: 467 QMPMEPNERV---WGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGR 523
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
W+DV VR M G++K+PG S++EIN ++ FL GD SH++ KEIY L
Sbjct: 524 WQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKAL 574
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 222/444 (50%), Gaps = 43/444 (9%)
Query: 4 LKQIQAQIF-QIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
LK++ ++I L NP KLM + + G Y IF I ++ +N++I++
Sbjct: 54 LKKLHSKILIDQNLHPNPSLGIKLMR--AYAACGEPCYTRHIFDEITDKNVVFFNVMIRS 111
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ G ++ +LL+F + +G PDN+TYP V KA G + G ++HG VVK GL+ +
Sbjct: 112 YVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMN 171
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
Y+ N ++ MYG + +++ DEMP +D+VSWN ++G+ + RF DA+ + R M +
Sbjct: 172 LYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREM-E 230
Query: 183 GCNLMPDEGTVVSTLSAC--TALKNLELGKEIHRYINQE----------LEFTPIMGNAL 230
L PD GT+ S L A T+ N+ K++ + ++ + M N
Sbjct: 231 DLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEA 290
Query: 231 LDMYCK-------------------CGCLSEA---RELFDEMPNK----NVICWTSMVSG 264
+D+Y + CG LS A R + + + K N++ +++
Sbjct: 291 VDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDM 350
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
Y CG L++AR +FD+ RD+V WT+MI+ Y + +AVALF++M+ PD
Sbjct: 351 YAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAF 410
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-R 383
V++L C+ G +++G++ + E IT ++++ + G I++A + ++
Sbjct: 411 VSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPM 470
Query: 384 EKDAASWTSIICGLAMNGKINKAL 407
E + W S++ + +N AL
Sbjct: 471 EPNERVWGSLLSACRVYSSMNIAL 494
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/485 (38%), Positives = 286/485 (58%), Gaps = 7/485 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVK 166
+++H ++K+GL D Y + +F D+ D WN+ I G
Sbjct: 28 KQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGLSC 87
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM 226
+ + ++ ++ RM C+ + T L AC+ L + +IH +I + I
Sbjct: 88 SDQPDRSLLLYHRML-CCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIY 146
Query: 227 G-NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
N+L++ Y G A LFD + + + W S++ GYV G+++ A LF + P ++
Sbjct: 147 AVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKN 206
Query: 286 -IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ WT MI+GYVQ EA+ LF EMQ + PD L + L+ C+QLGALEQGKWIH
Sbjct: 207 NAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIH 266
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
Y N+ R +D+V+ LI+MYAKCG +E+AL +F ++ K WT++I G A +G
Sbjct: 267 SYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGR 326
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+A+ F +M + G KP+ ITF VL+ACS+ GLV+EG+ FNT+ Y ++P +EHYGC+
Sbjct: 327 EAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCM 386
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAGLL+EA I+K+P + N +I +G+LL AC+I+ N+++GEK+ +L +++S
Sbjct: 387 VDLLGRAGLLNEANRFIQKMPLKPNAVI---WGSLLKACQIHKNIELGEKIGEILIEMDS 443
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+ +ANI+A +W+ R+ M+E GV KVPGCS+I + G HEFL GD SH+
Sbjct: 444 NHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHA 503
Query: 585 EMKEI 589
E++EI
Sbjct: 504 EIQEI 508
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 203/444 (45%), Gaps = 76/444 (17%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIF-GSIQSPCLLAYNLLIK 61
+LKQI A++ + GL Q+P + K + FC S YA +F P +NL+I+
Sbjct: 26 ELKQIHARMLKSGLLQDPYAMTKFLSFCL--SSSFSSYAHDVFFNGFDRPDTFLWNLMIR 83
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ +SLLL+ ++ + +T+PF+ KA L ++ ++H ++ K G
Sbjct: 84 GLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGH 143
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
D Y NS+++ Y V G + LFD + + D VSWN I G+VK + A+ +FR+M
Sbjct: 144 DIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMP 203
Query: 181 ------------------------------RQGCNLMPDEGTVVSTLSACTALKNLELGK 210
Q N+ PD ++ S LSAC+ L LE GK
Sbjct: 204 EKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGK 263
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH Y N+ ++ L+DMY KCG + EA +F M K+V WT+++SGY
Sbjct: 264 WIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGY---- 319
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
Y R EA++ F EMQ + +KP+ A+LT
Sbjct: 320 -------------------------AYHGLGR--EAISKFLEMQNMGVKPNAITFTAVLT 352
Query: 330 GCAQLGALEQGKWIHGYINEN---RITVDAVVATALIEMYAKCGLIEKALEIFYELREK- 385
C+ G +E+GK + I + + T++ ++++ + GL+ +A ++ K
Sbjct: 353 ACSYTGLVEEGKSVFNTIERDYNLKPTIEHY--GCMVDLLGRAGLLNEANRFIQKMPLKP 410
Query: 386 DAASWTSIICGLAMNGKINKALEL 409
+A W S++ +I+K +EL
Sbjct: 411 NAVIWGSLLKAC----QIHKNIEL 430
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/560 (34%), Positives = 313/560 (55%), Gaps = 19/560 (3%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
NL A +F + ++++N ++ +A+ G +++ +F ++ ++ ++ +
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWNGMLA 100
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A G ++ ++ + K E ++ C +M Y ++ + + +FD MP++D VS
Sbjct: 101 AYVQNGRIEDARRL--FESKADWELISWNC--MMGGYVKRNRLVDARGIFDRMPERDEVS 156
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN ISG+ + +A +F P T ++N L E R
Sbjct: 157 WNTMISGYAQNGELLEAQRLFEES-------PVRDVFTWTAMVSGYVQNGML-DEARRVF 208
Query: 217 NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
+ E + NA++ Y +C + +ARELF+ MP +NV W +M++GY G + +AR+
Sbjct: 209 DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARN 268
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
FDR P RD + W A+I GY Q +EA+ LF EM+ + ++ + L+ CA++ A
Sbjct: 269 FFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAA 328
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
LE GK +HG + + + V AL+ MY KCG I+ A +F + EK+ SW ++I G
Sbjct: 329 LELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAG 388
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
A +G +AL LF M G PDD+T +GVLSACSH GLVD+G +F +MT+ Y I
Sbjct: 389 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA 448
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
+HY C+IDLLGRAG LD+A+ L++ +P E + +GALL A RI+GN ++GEK A
Sbjct: 449 NSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPD---AATWGALLGASRIHGNTELGEKAA 505
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
++ ++E +S + LL+N+YA++ RW DV +R +M++ GV+KVPG S +E+ IH F
Sbjct: 506 KMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTF 565
Query: 577 LVGDPSHSEMKEIYSMLDRM 596
VGD H E IY+ L+ +
Sbjct: 566 TVGDSVHPERDRIYTFLEEL 585
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 140/281 (49%), Gaps = 12/281 (4%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F+ QN + N ++ + +G++ A F + +++ +I +A+ G
Sbjct: 237 ELFEAMPCQNVSSWNTMIT--GYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYG 294
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
++L LF +++ G + T+ + ++ G++VHG VVK GLE YV N++
Sbjct: 295 EEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNAL 354
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+ MY G I + +F+ + +K+VVSWN I+G+ + ++A+ +F M++ ++PD
Sbjct: 355 LVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKK-TGILPD 413
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELF 247
+ T+V LSAC+ ++ G E + Q+ T + ++D+ + G L +A+ L
Sbjct: 414 DVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLM 473
Query: 248 DEMP-NKNVICW-----TSMVSGYVNCGQLEKARDLFDRSP 282
MP + W S + G G+ + A+ +F+ P
Sbjct: 474 KNMPFEPDAATWGALLGASRIHGNTELGE-KAAKMIFEMEP 513
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 26/299 (8%)
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ G V L AR LFD+ P RD+V W AM++GY Q EA +F EM +
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNS 92
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
+L Q G +E + + E++ + + ++ Y K + A IF
Sbjct: 93 ISWNGMLAAYVQNGRIEDAR----RLFESKADWELISWNCMMGGYVKRNRLVDARGIFDR 148
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ E+D SW ++I G A NG++ +A LF + D T+ ++S G++DE
Sbjct: 149 MPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWTAMVSGYVQNGMLDEA 204
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
RR F+ M E + + +I + +D+A EL +P +N V + +++
Sbjct: 205 RRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQN----VSSWNTMIT 255
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDS-SFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
G++ +++ +DS S+ ++A YA + E+ ++ +MK G R
Sbjct: 256 GYAQNGDIAQARN---FFDRMPQRDSISWAAIIAG-YAQSGYGEEALHLFVEMKRDGER 310
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 287/484 (59%), Gaps = 44/484 (9%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
V+P+++T+P + K +G + GEK+H ++K G E D +V NS++ MY V G+I + +
Sbjct: 6 VAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 65
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
+F+ D+V+WN I G+VK A ++F M +
Sbjct: 66 AMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPE--------------------- 104
Query: 204 KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+++ + N+++ Y G ++ A +LF++MP ++++ W M+
Sbjct: 105 ------RDLFSW------------NSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMID 146
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
GY +E A +LF+ P R++V W M+ YV+ +DE + +F +M + P++
Sbjct: 147 GYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKM-MGETMPNEAT 205
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
LV++LT CA LG L++GKWIH YI NR I D +++TAL+ MYAKCG ++ A ++F ++
Sbjct: 206 LVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKM 265
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+ SW S+I G M+G+ +KALE+F M G P+D TFI VLSAC+H G++ EG
Sbjct: 266 SNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGW 325
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
+F+ M Y+I+PK+EHYGC++DLLGRAGL+ + EELIRK+P E L+GALLSA
Sbjct: 326 WYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGG---TALWGALLSA 382
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
CR + N ++ E +A L ++E +D + LL+NIYA+ +W+DV VR+ MKE G+ K
Sbjct: 383 CRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTT 442
Query: 563 GCSS 566
G SS
Sbjct: 443 GLSS 446
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/514 (35%), Positives = 287/514 (55%), Gaps = 37/514 (7%)
Query: 85 SPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
+P + T+P K+ L ++ GE++H +K + +V S++ +Y G + +
Sbjct: 114 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 173
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++FDEMP VSW I+ ++ +AV V R + PD T V L+AC +
Sbjct: 174 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFAN-GMRPDSFTAVRVLTACARV 232
Query: 204 KNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
+L G+ + R QE + + + A +D+Y KCG +++ARE+FD+M +K+ + W +MV
Sbjct: 233 ADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMV 292
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
GY + NG+ + EA+ LF MQ ++PD +
Sbjct: 293 GGYAS--------------------------NGHPR-----EALDLFLAMQAEGVRPDCY 321
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+ L+ C +LGAL+ G+ ++ + + V+ TALI+MYAKCG +A +F ++
Sbjct: 322 AVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQM 381
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
R+KD W ++I GL M G A L QM G K +D TFIG+L +C+H GL+ +GR
Sbjct: 382 RKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGR 441
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
R+F+ MT++Y I P++EHYGC++DLL RAGLL EA +LI +P N +I+ GALL
Sbjct: 442 RYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVIL---GALLGG 498
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
C+I+ N ++ E + L ++E +S + +L+NIY++ RWED +R MKE GV KVP
Sbjct: 499 CKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVP 558
Query: 563 GCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
CS +E G +HEF VGD SH +IY LD +
Sbjct: 559 ACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDEL 592
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 191/414 (46%), Gaps = 41/414 (9%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A+ ++ NP L L+ + G L A+++F + P +++ LI A+
Sbjct: 138 EQLHARSLKLPSHTNPHVLTSLLTL--YARCGLLHRAQRVFDEMPHPSTVSWTALITAYM 195
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G R+++ + G+ PD+FT V A + ++ GE V + G+ +
Sbjct: 196 DAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVF 255
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V + +D+Y G++ +++FD+M DKD V+W + G+ +A+D+F M Q
Sbjct: 256 VATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAM-QAE 314
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD V LSACT L L+LG++ R ++ E P++G AL+DMY KCG +EA
Sbjct: 315 GVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEA 374
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+F +M K++I W +M+ G G EK
Sbjct: 375 WVVFQQMRKKDIIVWNAMILGLGMTGH-EKT----------------------------- 404
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATAL 362
A L +M+ +K + + LL C G ++ G ++ H I+ +
Sbjct: 405 -AFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCI 463
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG-KINKALELFSQMIS 415
+++ ++ GL+++A ++L + ++I G + G KI++ EL +++
Sbjct: 464 VDLLSRAGLLQEA----HQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLT 513
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/603 (34%), Positives = 315/603 (52%), Gaps = 79/603 (13%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QL QI AQIF L N + +L+ + S +L YA IF P L +N LI
Sbjct: 53 LPQLHQIHAQIFLHNLFSNSRVVTQLI--SSSCSLKSLDYALSIFRCFDHPNLFVFNALI 110
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ A+ F S+ F + + PD T PFV K+V L +V G +HG V+K GLE
Sbjct: 111 RGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE 170
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD----VVSWNVSISGHVKCMRFEDAVDV 176
FD++V S++DMY +G++ +LFDE P ++ ++ WNV I+G K A +
Sbjct: 171 FDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASL 230
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
F M + + G+ N+L++ + +
Sbjct: 231 FEAMPE-----RNAGS----------------------------------WNSLINGFVR 251
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G L ARELF +MP KNV+ WT+M++G+ G EKA +F W + G
Sbjct: 252 NGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMF----------WRMLEEG- 300
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
++P+ +V+ L C ++GAL+ G+ IH Y++ N ++
Sbjct: 301 --------------------VRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNR 340
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ TAL++MYAKCG I+ A +F E + KD +W+ +I G A++G ++AL+ F +M S
Sbjct: 341 GIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSA 400
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD++ F+ +L+ACSH G VD+G FF +M Y I+P ++HY ++DLLGRAG LDE
Sbjct: 401 GINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDE 460
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A I+ +P + +I +GAL ACR + N++M E A L ++E K + L+N+
Sbjct: 461 ALSFIQSMPINPDFVI---WGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNV 517
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YA+ RWEDV VR MK GV K PG S IE+ G +H F+ GD +H +EI L+ +
Sbjct: 518 YAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEI 577
Query: 597 AKT 599
+
Sbjct: 578 TAS 580
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 305/524 (58%), Gaps = 34/524 (6%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSI 161
+K+ +++H + + L +Y+ + I+ + + G + LF +P+ ++ +N I
Sbjct: 1 MKQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSII 60
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
+ + +F VF +M N+ P+ T + + AC +L +LE Q
Sbjct: 61 TSYTTNSQFHKLFFVFTKMLN-TNIRPNSHTFTTLVKACVSLSSLE----------QVFT 109
Query: 222 FTPIMGNA--------LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
+ +GN+ +++ + K + AR++FDE N+NV+CWTS+VSGY +CG + +
Sbjct: 110 LSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNE 169
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ-----IIRLKPDKFILVALL 328
ARD+FD+ P+R+ ++AM++GYV+ F E V LFRE++ LK + +LV++L
Sbjct: 170 ARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVL 229
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
C +GA E+GKWIH Y+ EN + D + TALI+ Y KCG ++ A ++F ++ KD A
Sbjct: 230 NACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVA 289
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+W+++I GLA+NG ALELF +M G KP+++TF+GVL+AC+H L E R F M
Sbjct: 290 TWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIM 349
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+E Y I P +EHYGC++D+L R+G + +A I + E + I +G+LL+ C ++G+
Sbjct: 350 SEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAI---WGSLLNGCLMHGH 406
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
++G+K+ L + E K S + LLAN+YA+ +WE V+ VR+ MK+ GV V G S IE
Sbjct: 407 YELGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIE 466
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDN 612
I+ IH+F D +EIY +L + K + D + GDN
Sbjct: 467 IDQTIHKFFADDKCCLYSREIYDVLSHLGKKVED-----ISGDN 505
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 200/460 (43%), Gaps = 78/460 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M Q KQI A L + ++++ F G+ YAE +F I +P + YN +I
Sbjct: 1 MKQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSII 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
++ F K +F+K+ + P++ T+ + KA L + E+V +K G
Sbjct: 61 TSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSL---EQVFTLSMKLGNS 117
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y +S+++ + I +++FDE +++VV W +SG+ C +A DVF +M
Sbjct: 118 SDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKM 177
Query: 181 ----------------------------------RQGCNLMPDEGT-VVSTLSACTALKN 205
+GC + G +VS L+ACT +
Sbjct: 178 PLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGA 237
Query: 206 LELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
E GK IH Y+ + LE+ +G AL+D Y KCG + A ++F++MP K+V W++M+ G
Sbjct: 238 FEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILG 297
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
ING + A+ LF +M+ + KP++
Sbjct: 298 LA--------------------------INGNNKM-----ALELFEKMEKVGPKPNEVTF 326
Query: 325 VALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
V +LT C + + G ++E IT ++++ A+ G ++KAL +
Sbjct: 327 VGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMH 386
Query: 384 -EKDAASWTSIICGLAMNG------KINKALELFSQMISG 416
E D A W S++ G M+G K+ K L F SG
Sbjct: 387 IEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEPKHSG 426
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/514 (35%), Positives = 287/514 (55%), Gaps = 37/514 (7%)
Query: 85 SPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
+P + T+P K+ L ++ GE++H +K + +V S++ +Y G + +
Sbjct: 67 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 126
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++FDEMP VSW I+ ++ +AV V R + PD T V L+AC +
Sbjct: 127 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFAN-GMRPDSFTAVRVLTACARV 185
Query: 204 KNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
+L G+ + R QE + + + A +D+Y KCG +++ARE+FD+M +K+ + W +MV
Sbjct: 186 ADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMV 245
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
GY + NG+ + EA+ LF MQ ++PD +
Sbjct: 246 GGYAS--------------------------NGHPR-----EALDLFLAMQAEGVRPDCY 274
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+ L+ C +LGAL+ G+ ++ + + V+ TALI+MYAKCG +A +F ++
Sbjct: 275 AVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQM 334
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
R+KD W ++I GL M G A L QM G K +D TFIG+L +C+H GL+ +GR
Sbjct: 335 RKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGR 394
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
R+F+ MT++Y I P++EHYGC++DLL RAGLL EA +LI +P N +I+ GALL
Sbjct: 395 RYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVIL---GALLGG 451
Query: 503 CRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
C+I+ N ++ E + L ++E +S + +L+NIY++ RWED +R MKE GV KVP
Sbjct: 452 CKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVP 511
Query: 563 GCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
CS +E G +HEF VGD SH +IY LD +
Sbjct: 512 ACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDEL 545
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 193/415 (46%), Gaps = 43/415 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A+ ++ NP L L+ + G L A+++F + P +++ LI A+
Sbjct: 91 EQLHARSLKLPSHTNPHVLTSLLTL--YARCGLLHRAQRVFDEMPHPSTVSWTALITAYM 148
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G R+++ + G+ PD+FT V A + ++ GE V + G+ +
Sbjct: 149 DAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVF 208
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V + +D+Y G++ +++FD+M DKD V+W + G+ +A+D+F M Q
Sbjct: 209 VATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAM-QAE 267
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMYCKCGCLSE 242
+ PD V LSACT L L+LG++ R ++ + EF P++G AL+DMY KCG +E
Sbjct: 268 GVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWD-EFLDNPVLGTALIDMYAKCGSTAE 326
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F +M K++I W +M+ G G EK
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGH-EKT---------------------------- 357
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATA 361
A L +M+ +K + + LL C G ++ G ++ H I+
Sbjct: 358 --AFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 415
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG-KINKALELFSQMIS 415
++++ ++ GL+++A ++L + ++I G + G KI++ EL +++
Sbjct: 416 IVDLLSRAGLLQEA----HQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLT 466
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/451 (39%), Positives = 283/451 (62%), Gaps = 8/451 (1%)
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNA 229
+++ +F M + +P+ T V AC + G++I + I LE + NA
Sbjct: 13 HNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNA 72
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
++ MY G + EAR +FD ++++ W M+ GYV G++ +A+++FD RD+V W
Sbjct: 73 MIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSW 132
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
T +I GYVQ F EA+ LF EM P++F L + L CA L AL+QG+WIH YI++
Sbjct: 133 TTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDK 192
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIF---YELREKDAASWTSIICGLAMNGKINKA 406
+ I ++ + +L++MYAKCG I+ A ++F Y L+ K W ++I G AM+GK +A
Sbjct: 193 SEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSKEA 251
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
++LF QM P+ +TF+ +L+ACSHG LV+EGR +F +M Y I+P++EHYGC++D
Sbjct: 252 IDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVD 311
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LLGR+GLL EAEE + +P + I +GALL ACRI+ +++ G+++ ++++++S
Sbjct: 312 LLGRSGLLKEAEETVFNMPMAPDATI---WGALLGACRIHKDIERGQRIGKIIKELDSDH 368
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
H LLAN+Y+++ +W++ VRQK++ G +K PGCSSIE+NG+ H+FLVGD SH +
Sbjct: 369 IGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQT 428
Query: 587 KEIYSMLDRMAKTLLDSKQNAMEGDNLVAIN 617
K++Y LD M L ++ G+ L+ I+
Sbjct: 429 KQLYLFLDEMTTKLKNAGYVPEFGEVLLDID 459
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 202/466 (43%), Gaps = 111/466 (23%)
Query: 59 LIKAFA--KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
+IKA A S + S +R G P+ +T+ FVFKA G V +GE++ + +K
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 60
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS---------------- 160
GLE + +V N+++ MY G + +++FD D+D+ SWN+
Sbjct: 61 IGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEM 120
Query: 161 ---------------ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
I+G+V+ F++A+D+F M Q P+E T+ S L+AC L
Sbjct: 121 FDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQ-TGPPPNEFTLASALAACANLVA 179
Query: 206 LELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELF-DEMPNK-NVICWTSMV 262
L+ G+ IH YI++ E++ + +LLDMY KCG + A ++F DE K V W +M+
Sbjct: 180 LDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMI 239
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
GY G+ ++A DLF+ +M++ ++ P+K
Sbjct: 240 GGYAMHGKSKEAIDLFE-------------------------------QMKVEKVSPNKV 268
Query: 323 ILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
VALL C+ +E+G+ + + I + ++++ + GL+++A E +
Sbjct: 269 TFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFN 328
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ PD + +L AC ++ G
Sbjct: 329 MP----------------------------------MAPDATIWGALLGACRIHKDIERG 354
Query: 442 RRFFNTMTEVYQIQPKLEHYGC---LIDLLGRAGLLDEAEELIRKI 484
+R + E+ +H GC L +L +G DEA+ + +KI
Sbjct: 355 QRIGKIIKEL-----DSDHIGCHVLLANLYSASGQWDEAKAVRQKI 395
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 153/316 (48%), Gaps = 17/316 (5%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F L Q+ + N ++ + G + A+++F + ++++ +I + + G F
Sbjct: 88 RVFDWSLDQDLYSWN--IMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCF 145
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+++L LF ++ + G P+ FT A L + +G +H Y+ K+ ++ + + S+
Sbjct: 146 KEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASL 205
Query: 130 MDMYGVLGKICNVKKLF-DEMPDK-DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLM 187
+DMY G+I K+F DE K V WN I G+ + ++A+D+F +M+ +
Sbjct: 206 LDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVE-KVS 264
Query: 188 PDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARE 245
P++ T V+ L+AC+ K +E G+ + + P + + ++D+ + G L EA E
Sbjct: 265 PNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEE 324
Query: 246 LFDEMP-NKNVICWTSMVSGYVNCGQLEKARDL------FDRSPVRDIVLWTAMINGYVQ 298
MP + W +++ +E+ + + D + VL + N Y
Sbjct: 325 TVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVL---LANLYSA 381
Query: 299 FNRFDEAVALFREMQI 314
++DEA A+ +++++
Sbjct: 382 SGQWDEAKAVRQKIEV 397
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 328/574 (57%), Gaps = 45/574 (7%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +F ++ ++ +N+++K + + G +++ LFS+ G+ PD F+ +
Sbjct: 232 GRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLIL 291
Query: 96 KAVGWLG--EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD 153
W G +++ G++VHG VK+GL+ D V NS+++MY +G +++F++M D
Sbjct: 292 NGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 351
Query: 154 VVSWNVSISGHVKCMRFEDAVDVF-RRMRQGCNLMPDEGTVVS-TLS----ACTALKNLE 207
++SWN IS + E++V++F + +G L PD T+ S TL+ AC L L+
Sbjct: 352 LISWNSMISSCAQSSLEEESVNLFIDLLHEG--LKPDHFTLASITLATAAKACGCLVLLD 409
Query: 208 LGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
GK+IH + I + + + +LDMY KCG +M N ++
Sbjct: 410 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG----------DMVNAGIV---------- 449
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
F+ D V WT+MI+G V D+A+ ++ M+ R+ PD++
Sbjct: 450 -----------FNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFAT 498
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
L+ + + ALEQG+ +H + + D V T+L++MYAKCG IE A +F ++ ++
Sbjct: 499 LIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN 558
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
A W +++ GLA +G +A+ LF M S G +PD ++FIG+LSACSH GL E + +
Sbjct: 559 IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH 618
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+M Y I+P++EHY CL+D LGRAGL+ EA+++I +P + + + ALL ACRI
Sbjct: 619 SMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS---ASINRALLGACRIQ 675
Query: 507 GNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
G+V+ G+++AA L +E DS+ + LL+NIYA+ANRW+DVT+ R+ MK V+K PG S
Sbjct: 676 GDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 735
Query: 567 IEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
I++ ++H F+V D SH + IY ++ M KT+
Sbjct: 736 IDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTI 769
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 41/399 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ + GL + N L+ + G +A ++F ++ L+++N +I + A
Sbjct: 306 KQVHGIAVKSGLDSDVSVANSLVNM--YSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVF-----KAVGWLGEVKKGEKVHGYVVKTGL 119
+ +S+ LF L G+ PD+FT + KA G L + +G+++H + +K G
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ D +V + I+DMY G + N +F+ + D V+W ISG V + A+ ++ R
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
MRQ +MPDE T + + A + + LE G+++H I + P +G +L+DMY K
Sbjct: 484 MRQS-RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK-- 540
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
CG +E A LF + VR+I LW AM+ G Q
Sbjct: 541 -----------------------------CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQ 571
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAV 357
+EAV LF+ M+ ++PD+ + +L+ C+ G + +++H N+ I +
Sbjct: 572 HGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIE 631
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ L++ + GL+++A ++ + K +AS + G
Sbjct: 632 HYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 670
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 172/382 (45%), Gaps = 55/382 (14%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G+ H +V +G D ++ N+++ MY G + + +++FD P++D+V+WN + +
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155
Query: 167 CMRFED-----AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQEL 220
+ D + +FR +R T+ L C L + +H Y I L
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLG-STTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 214
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
E+ + AL+++Y KCG + +AR LFD M ++V+ W M+ GYV G LEK
Sbjct: 215 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG-LEK------- 266
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA--LE 338
EA LF E L+PD+F + +L GC G LE
Sbjct: 267 -----------------------EAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLE 303
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
GK +HG ++ + D VA +L+ MY+K G A E+F +++ D SW S+I A
Sbjct: 304 LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363
Query: 399 MNGKINKALELFSQMISGGAKPD-----DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
+ +++ LF ++ G KPD IT AC L+D+G+ Q
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGK----------Q 413
Query: 454 IQPKLEHYGCLIDLLGRAGLLD 475
I G DL +G+LD
Sbjct: 414 IHAHAIKAGFDSDLHVNSGILD 435
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 158/335 (47%), Gaps = 27/335 (8%)
Query: 1 MTQLKQIQAQIFQIG----LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAY 56
+ Q KQI A + G L N L+ + + C G+++ A +F I +P +A+
Sbjct: 408 LDQGKQIHAHAIKAGFDSDLHVNSGILD-MYIKC-----GDMVNAGIVFNYISAPDDVAW 461
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
+I G+ ++L ++ ++R+ V PD +T+ + KA + +++G ++H V+K
Sbjct: 462 TSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIK 521
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
D +V S++DMY G I + +LF +M +++ WN + G + E+AV++
Sbjct: 522 LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNL 581
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ---ELEFTPIMGN--ALL 231
F+ M+ + PD + + LSAC+ + L E + Y++ + P + + L+
Sbjct: 582 FKSMKSH-GIEPDRVSFIGILSACS---HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLV 637
Query: 232 DMYCKCGCLSEARELFDEMPNK------NVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
D + G + EA ++ + MP K + + G V G+ AR LF P D
Sbjct: 638 DALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAAR-LFALEPF-D 695
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+ + N Y NR+D+ + M+ +K D
Sbjct: 696 SAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKD 730
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 316/561 (56%), Gaps = 9/561 (1%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A+ +F + ++ +N L + G +K L +F ++ GV PD + A
Sbjct: 296 AQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ 355
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L ++K G+ +HG+ VK G+ D +VC +++++Y + + +FD MP ++VV+WN
Sbjct: 356 LKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSL 415
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
S +V C + ++VFR M + PD T++S L AC+ L++L+ GK IH + +
Sbjct: 416 SSCYVNCGFPQKGLNVFREMVLN-GVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHG 474
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF- 278
+ + NALL +Y KC C+ EA+ +FD +P++ V W +++ Y + EK +F
Sbjct: 475 MVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFS 534
Query: 279 --DRSPVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+R V+ D + W+ +I G V+ +R +EA+ +FR+MQ + KPD+ + ++L C+
Sbjct: 535 QMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSE 594
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
L GK IH Y+ + D AL++MYAKCG + + +F + KD SW ++I
Sbjct: 595 CLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIF 654
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
M+G +AL LF +M+ KPD TF VLSACSH LV+EG + FN+M+ + ++
Sbjct: 655 ANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVE 714
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P+ EHY C++D+ RAG L+EA I+++P E I + A L+ CR+Y NV++ +
Sbjct: 715 PEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIA---WKAFLAGCRVYKNVELAKIS 771
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A L +I+ S+ + L NI +A W + + +R+ MKE G+ K PGCS + +H
Sbjct: 772 AKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHT 831
Query: 576 FLVGDPSHSEMKEIYSMLDRM 596
F+ GD S+ E +IY+ LD +
Sbjct: 832 FVAGDKSNMESDKIYNFLDEL 852
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 253/528 (47%), Gaps = 53/528 (10%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + + ++ +N L + G ++ L +F K+ V + T +
Sbjct: 94 ARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSD 153
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L ++K G+++HG+VV+ G+ D +V ++ ++ Y + + +FD MP +DVV+WN
Sbjct: 154 LQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSL 213
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
S +V C + ++VFR M + PD TV LSAC+ L++L+ GK IH + +
Sbjct: 214 SSCYVNCGFPQKGLNVFREMVLD-GVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHG 272
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ + NAL+++Y C C+ EA+ +FD MP++NVI W S+ S YVNCG +K +
Sbjct: 273 MVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLN--- 329
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
+FREM + +KPD + ++L C+QL L+
Sbjct: 330 ----------------------------VFREMGLNGVKPDPMAMSSILPACSQLKDLKS 361
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK IHG+ ++ + D V TAL+ +YA C + +A +F + ++ +W S+
Sbjct: 362 GKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVN 421
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACS-----HGGLVDEGRRFFNTMTEVYQI 454
G K L +F +M+ G KPD +T + +L ACS G V G + M E
Sbjct: 422 CGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE---- 477
Query: 455 QPKLEHYGC--LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
+ + C L+ L + + EA+ + IP+ V + +L+A + G
Sbjct: 478 ----DVFVCNALLSLYAKCVCVREAQVVFDLIPHRE----VASWNGILTAYFTNKEYEKG 529
Query: 513 EKLAALLEKIESK-DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
+ + + + E K D +++ +R E+ + +KM+ MG +
Sbjct: 530 LYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFK 577
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 205/422 (48%), Gaps = 40/422 (9%)
Query: 71 KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
+++ +++ R RG+ PD + V KA + K ++ H + G+ D + N+ +
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN-LMPD 189
YG + +++FD++ +DVV+WN + +V C + ++VFR+M G N + +
Sbjct: 83 HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKM--GLNKVKAN 140
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFD 248
TV S L C+ L++L+ GKEIH ++ + + + +A ++ Y KC C+ EA+ +FD
Sbjct: 141 PLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFD 200
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
MP+++V+ W S+ S YVNCG +K + +
Sbjct: 201 LMPHRDVVTWNSLSSCYVNCGFPQKGLN-------------------------------V 229
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
FREM + +KPD + +L+ C+ L L+ GK IHG+ ++ + + V+ AL+ +Y
Sbjct: 230 FREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYES 289
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
C + +A +F + ++ +W S+ G K L +F +M G KPD + +
Sbjct: 290 CLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSI 349
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC--LIDLLGRAGLLDEAEELIRKIPN 486
L ACS + G+ + ++ + + C L++L + EA+ + +P+
Sbjct: 350 LPACSQLKDLKSGKTIHGFAVKHGMVE---DVFVCTALVNLYANCLCVREAQTVFDLMPH 406
Query: 487 EN 488
N
Sbjct: 407 RN 408
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%)
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+EA+ ++ + +KPDK + +A+ CA + K H + D + A
Sbjct: 22 NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I Y KC +E A +F +L +D +W S+ G + L +F +M K +
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141
Query: 423 ITFIGVLSACS 433
+T +L CS
Sbjct: 142 LTVSSILPGCS 152
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L + +F + + ++N +I A G+ +++L LF K+ V PD+ T+ V
Sbjct: 629 GGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVL 688
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGL---EFDTYVCNSIMDMYGVLGKICNVKKLFDEMP-D 151
A V++G ++ + + L E + Y C ++D+Y G + MP +
Sbjct: 689 SACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTC--VVDIYSRAGCLEEAYGFIQRMPME 746
Query: 152 KDVVSWNVSISG 163
++W ++G
Sbjct: 747 PTAIAWKAFLAG 758
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 275/449 (61%), Gaps = 31/449 (6%)
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN I+ + K + +A++V+ ++R+ + D S L AC + +LGKEIH ++
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRK-MDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 185
Query: 217 -NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW----TSMVSGYVNCGQL 271
+ L+ +GNAL+ MY +C C+ AR +FD+M ++V+ W T+++ Y CG L
Sbjct: 186 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHL 245
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
AR LF+ + +V WTAMI G ++ NR +E LF MQ + P++ +
Sbjct: 246 GLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM------- 298
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
+N+ R+ VD ++ TAL++MYAKCG I A +F E +D W
Sbjct: 299 ---------------LNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWN 343
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+II G AM+G +AL++F++M G KP+DITFIG+L ACSH GLV EG++ F M
Sbjct: 344 AIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT 403
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
+ + P++EHYGC++DLLGRAGLLDEA E+I+ +P + N I+ +GAL++ACR++ N +
Sbjct: 404 FGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV---WGALVAACRLHKNPQL 460
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
GE A L +IE ++ ++ L++NIYA+ANRW D VR+ MK +G++K PG S IE+NG
Sbjct: 461 GELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNG 520
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+HEFL+GD SH +++ I ML M + L
Sbjct: 521 TVHEFLMGDQSHPQIRRINEMLAEMRRKL 549
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A ++F S + +N +I FA G ++L +F+++ +GV P++ T+ +
Sbjct: 322 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLL 381
Query: 96 KAVGWLGEVKKGEKVHGYVVKT-GL--EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
A G V +G+K+ +V T GL + + Y C ++D+ G G + ++ MP K
Sbjct: 382 HACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGC--MVDLLGRAGLLDEAHEMIKSMPIK 439
Query: 153 -DVVSWNVSISG 163
+ + W ++
Sbjct: 440 PNTIVWGALVAA 451
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 309/559 (55%), Gaps = 36/559 (6%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
NL A+K+F S+ + L +YN +I +A+ ++L +F L++ G+ D + F+
Sbjct: 325 NLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFR 384
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A + +G +VHG +K+ + + V N+I+DMYG G + +F+EM +D VS
Sbjct: 385 ACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS 444
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RY 215
WN I+ H + E + +F M Q + PDE T S L AC + L G EIH R
Sbjct: 445 WNAIIAAHEQNGNEEKTLSLFVWMLQS-GMEPDEFTYGSVLKACAGWQALNCGMEIHNRI 503
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
I L +G AL+DMY KCG +EKA
Sbjct: 504 IKSRLGLDSFVGIALIDMYSKCG-------------------------------MMEKAE 532
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
L DR + +V W A+I+G+ + +EA F +M + + PD F +L CA L
Sbjct: 533 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 592
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
+E GK IH I + + DA +++ L++MY+KCG ++ IF + +D +W +++C
Sbjct: 593 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 652
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A +G +AL++F M KP+ TF+ VL AC H GLV++G +F++M Y +
Sbjct: 653 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 712
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P+LEHY C++D++GR+G + +A ELI +P E + +I + LLS C+I+GNV++ EK
Sbjct: 713 PQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVI---WRTLLSICKIHGNVEVAEKA 769
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A + ++E +DS+ + LL+NIYA+A W +VT +R+ M+ G++K PGCS IEI +H
Sbjct: 770 AYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHA 829
Query: 576 FLVGDPSHSEMKEIYSMLD 594
FLVGD +H KEIY LD
Sbjct: 830 FLVGDKAHPRSKEIYENLD 848
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/573 (25%), Positives = 260/573 (45%), Gaps = 71/573 (12%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G+ Q M+F + G++ A+K+F ++ ++++N LI + G RK +
Sbjct: 102 GMPQRDTVSWNAMLF-GYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
+F ++ G D T+ V K+ L + G ++HG VK G + D ++++DMY
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
K+ + F MP+K+ VSW+ I+G V+ +++F+ M Q + + T
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEM-QKAGVGVSQSTFA 279
Query: 195 STLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
S +C L L LG ++H + + + ++G A LDMY KC LS+A++LF+ +PN
Sbjct: 280 SVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH 339
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
N + + A+I GY + ++ EA+ +FR +Q
Sbjct: 340 N-------------------------------LQSYNAIIVGYARSDKGIEALGMFRLLQ 368
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
L D+ L CA + +G +HG ++ + VA A+++MY KCG +
Sbjct: 369 KSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALV 428
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+A +F E+ +DA SW +II NG K L LF M+ G +PD+ T+ VL AC+
Sbjct: 429 EACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACA 488
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYG--CLIDLLGRAGLLDEAEELIRKIPNEN--- 488
++ G N + + + L+ + LID+ + G++++AE+L ++ +
Sbjct: 489 GWQALNCGMEIHN---RIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVS 545
Query: 489 -NEIIVPL---------------------------YGALLSACRIYGNVDMGEKLAALLE 520
N II Y +L C V++G+++ A +
Sbjct: 546 WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQII 605
Query: 521 KIE-SKDSSFHTLLANIYASANRWEDVTNVRQK 552
K E D+ + L ++Y+ +D + +K
Sbjct: 606 KKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 638
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 225/447 (50%), Gaps = 34/447 (7%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
+ F S+ ++++ +I + R L LF ++++ GV T+ VF++ L
Sbjct: 230 QFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLS 289
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++ G ++HG+ +KT D + + +DMY + + +KLF+ +P+ ++ S+N I
Sbjct: 290 ALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIV 349
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
G+ + + +A+ +FR + Q L DE ++ AC +K G ++H + L
Sbjct: 350 GYARSDKGIEALGMFRLL-QKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQ 408
Query: 223 TPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ I + NA+LDMY KCG L EA +F+E MVS
Sbjct: 409 SNICVANAILDMYGKCGALVEACLVFEE-----------MVS------------------ 439
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
RD V W A+I + Q ++ ++LF M ++PD+F ++L CA AL G
Sbjct: 440 --RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGM 497
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
IH I ++R+ +D+ V ALI+MY+KCG++EKA ++ L E+ SW +II G ++
Sbjct: 498 EIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQK 557
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ +A + FS+M+ G PD+ T+ +L C++ V+ G++ + + ++Q
Sbjct: 558 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK-KELQSDAYIS 616
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNEN 488
L+D+ + G + + + + K PN +
Sbjct: 617 STLVDMYSKCGNMQDFQLIFEKAPNRD 643
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 186/374 (49%), Gaps = 35/374 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L+ A +F + S +++N +I A + G+ K+L LF + + G+ PD FTY V
Sbjct: 425 GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVL 484
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA + G ++H ++K+ L D++V +++DMY G + +KL D + ++ VV
Sbjct: 485 KACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVV 544
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-R 214
SWN ISG + E+A F +M + + PD T + L C L +ELGK+IH +
Sbjct: 545 SWNAIISGFSLQKQSEEAQKTFSKMLE-MGVDPDNFTYATILDTCANLVTVELGKQIHAQ 603
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I +EL+ + + L+DMY KCG + + + +F++ PN++ + W +MV GY G E
Sbjct: 604 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGE-- 661
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
EA+ +F MQ+ +KP+ +A+L C +
Sbjct: 662 -----------------------------EALKIFEYMQLENVKPNHATFLAVLRACGHM 692
Query: 335 GALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTS 392
G +E+G + H ++ + + ++++ + G + KALE+ + E DA W +
Sbjct: 693 GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRT 752
Query: 393 IICGLAMNGKINKA 406
++ ++G + A
Sbjct: 753 LLSICKIHGNVEVA 766
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 146/307 (47%), Gaps = 6/307 (1%)
Query: 192 TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T C+ K L GK+ H R I E + T + N L+ MY KC L A ++FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
P ++ + W +M+ GY G + A+ LFD P RD+V W ++I+GY+ + + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+M + D+ +L C+ L G IHG + D V +AL++MYAKC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
++ +++ F+ + EK+ SW++II G N + LELF +M G TF V
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN-- 488
+C+ + G + + + +D+ + L +A++L +PN N
Sbjct: 284 SCAGLSALRLGSQLHGHALKT-DFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342
Query: 489 --NEIIV 493
N IIV
Sbjct: 343 SYNAIIV 349
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 216/511 (42%), Gaps = 84/511 (16%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
DT N+++ Y G I +KLFD MP++DVVSWN ISG++ +DVF +M
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
R G D T L +C++L++ G +IH + + + G+ALLDMY KC
Sbjct: 167 RMGTVF--DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK- 223
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+L+ + F P ++ V W+A+I G VQ
Sbjct: 224 ------------------------------KLDCSIQFFHSMPEKNWVSWSAIIAGCVQN 253
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ + LF+EMQ + + ++ CA L AL G +HG+ + D V+
Sbjct: 254 DDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG 313
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TA ++MY KC + A ++F L + S+ +II G A + K +AL +F + G
Sbjct: 314 TATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLG 373
Query: 420 PDDITFIGVLSACS--HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
D+++ G AC+ G L EG + + ++ Q + ++D+ G+ G L EA
Sbjct: 374 LDEVSLSGAFRACAVIKGDL--EGLQ-VHGLSMKSLCQSNICVANAILDMYGKCGALVEA 430
Query: 478 ----EELIRKIPNENNEIIVP---------------------------LYGALLSACRIY 506
EE++ + N II YG++L AC +
Sbjct: 431 CLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGW 490
Query: 507 GNVDMGEKLAALLEKIESK---DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
++ G ++ + I+S+ DS L ++Y+ E + ++ E V
Sbjct: 491 QALNCGMEIHNRI--IKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTV----- 543
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+ N II F + S K ML+
Sbjct: 544 ---VSWNAIISGFSLQKQSEEAQKTFSKMLE 571
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 145/292 (49%), Gaps = 9/292 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + AEK+ + ++++N +I F+ + ++ FSK+ E GV PDNFTY +
Sbjct: 526 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 585
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
L V+ G+++H ++K L+ D Y+ ++++DMY G + + + +F++ P++D V
Sbjct: 586 DTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 645
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN + G+ + E+A+ +F M Q N+ P+ T ++ L AC + +E G
Sbjct: 646 TWNAMVCGYAQHGLGEEALKIFEYM-QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHS 704
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE 272
+ P + + ++D+ + G +S+A EL + MP + + W +++S G +E
Sbjct: 705 MLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVE 764
Query: 273 ----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
A + P D + + N Y ++E L + M+ LK +
Sbjct: 765 VAEKAAYSILQLEP-EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKE 815
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 225/695 (32%), Positives = 350/695 (50%), Gaps = 104/695 (14%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI A +F+ G + + G+L A ++F I +++N +I
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL-GEVKKGEKVHGYVVKTGLEFDT 123
+ + SL LF + V P +FT V A + G V+ G++VH Y ++ G + T
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRT 468
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV-DVFRRMRQ 182
Y N+++ MY LG++ + K LF KD+VSWN IS + RFE+A+ V+ +
Sbjct: 469 YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVD 528
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMG------------- 227
G + PD T+ S L AC+ L+ L +G+EIH Y N +L +G
Sbjct: 529 G--VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQP 586
Query: 228 ------------------NALLDMYCKCGCLSEARELFDEMPNKNVIC-----WTSMVSG 264
NALL Y + +A LF EM +++ C + S++
Sbjct: 587 KKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPA 646
Query: 265 YVNC-----------------------------------GQLEKARDLFDRSPVRDIVLW 289
V C G++E ++ +F R RDIV W
Sbjct: 647 CVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSW 706
Query: 290 TAMINGYVQFNRFDEAVALFREMQI------------------IRLKPDKFILVALLTGC 331
MI G + R+D+A+ L EMQ + KP+ L+ +L GC
Sbjct: 707 NTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGC 766
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
A L AL +GK IH Y + ++ +D V +AL++MYAKCG + A +F ++ ++ +W
Sbjct: 767 AALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWN 826
Query: 392 SIICGLAMNGKINKALELFSQMISGGA------KPDDITFIGVLSACSHGGLVDEGRRFF 445
+I M+GK +ALELF M +GG +P+++T+I + +ACSH G+VDEG F
Sbjct: 827 VLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLF 886
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+TM + ++P+ +HY CL+DLLGR+G + EA ELI +P+ N+ V + +LL ACRI
Sbjct: 887 HTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNK--VDAWSSLLGACRI 944
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ +V+ GE A L +E +S + L++NIY+SA W+ VR+KMKEMGVRK PGCS
Sbjct: 945 HQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCS 1004
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
IE +H+FL GD SH + KE++ L+ +++ +
Sbjct: 1005 WIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRM 1039
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 247/540 (45%), Gaps = 77/540 (14%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
L+++ SFR ++ ++ + PDNF +P V KA + ++ G+++H +V K G
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360
Query: 119 --LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
V NS+++MYG G + +++FD++PD+D VSWN I+ + +E ++ +
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALK-NLELGKEIHRYINQELEFTPIMGNALLDMYC 235
FR M N+ P T+VS AC+ ++ + LGK++H Y + + NAL+ MY
Sbjct: 421 FRLMLSE-NVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVTMYA 479
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
+ G +++A+ LF K+++ W +++S
Sbjct: 480 RLGRVNDAKALFGVFDGKDLVSWNTVIS-------------------------------S 508
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITV 354
Q +RF+EA+ M + ++PD L ++L C+QL L G+ IH Y N +
Sbjct: 509 LSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIE 568
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
++ V TAL++MY C +K +F + + A W +++ G A N ++AL LF +MI
Sbjct: 569 NSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMI 628
Query: 415 SGGAK-PDDITFIGVLSACS-----------HGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
S P+ TF VL AC HG +V G F V
Sbjct: 629 SESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRG---FGKDKYVQN--------- 676
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
L+D+ R G + E+ + I N+ + + +++ C + G D L +++
Sbjct: 677 ALMDMYSRMGRV----EISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRR 732
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV-PGCSSIEINGI---IHEFLV 578
+ +D S T + +ED V K + + V PGC+++ G IH + V
Sbjct: 733 QGEDGS-DTFV--------DYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAV 783
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
RSP + W ++ + F +A++ + M PD F A+L A + L
Sbjct: 293 RSPSQ----WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCL 348
Query: 340 GKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
GK IH ++ + + VA +L+ MY KCG + A ++F ++ ++D SW S+I L
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATL 408
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+ +L LF M+S P T + V ACSH V G R +
Sbjct: 409 CRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSH---VRGGVRLGKQVHAYTLRNGD 465
Query: 458 LEHY--GCLIDLLGRAGLLDEAEELI 481
L Y L+ + R G +++A+ L
Sbjct: 466 LRTYTNNALVTMYARLGRVNDAKALF 491
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 325/575 (56%), Gaps = 34/575 (5%)
Query: 1 MTQLKQIQAQIFQIGLQQNPE--TLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYN 57
+ Q K A I N + L+KL+ FC YA +F I SP + +N
Sbjct: 17 LLQFKTSHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYANLLFRQIHSPNVYIFN 76
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+IK +AK + SL L+ ++ + G SPD+FT+PFV KA ++ + G+ VH ++K+
Sbjct: 77 SMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVHSCILKS 136
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G E + YV +++MY + + K+FD++P +VV+W I+G+V + +A++VF
Sbjct: 137 GFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVF 196
Query: 178 RRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
+ M R G + +E T+V+ L AC ++++ G+ +H + CK
Sbjct: 197 KEMGRWG--VEANEVTMVNALIACARCRDVDTGRWVHERV------------------CK 236
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G + F N NVI T++V Y CG L AR+LF++ P R+IV W MIN Y
Sbjct: 237 AG-----YDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAY 291
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
Q+ R++EA+ LF M PDK +++L+ CA+ L G+ +H Y+ ++ + D
Sbjct: 292 NQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDI 351
Query: 357 VVATALIEMYAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ATAL++MYAK G + A +IF L +KD WTS+I LA++G N+AL LF M
Sbjct: 352 ALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQE 411
Query: 416 GGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
+ PD IT+IGVL ACSH GLV+E ++ FN MT+ Y I P+ EHY C++DLL RAG
Sbjct: 412 DSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHF 471
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EAE+L+ + N + ++GALL+ C+I+ N+ + ++ L ++E S + LL+
Sbjct: 472 REAEKLMETMSIRPN---IAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLS 528
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
NIYA++ +WE+V R+ MK + K G SS+E+
Sbjct: 529 NIYANSGKWEEVNRTRKMMKHKRIAKTIGHSSVEM 563
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 309/556 (55%), Gaps = 37/556 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + ++++N +I + G K L LF ++ G++ D T V
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G + G +HGY +K + + N ++DMY G + + ++F+ M ++ VVSW
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 323
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
I+G+ + + +V +F M + + PD T+ + L AC LE GK++H YI + +
Sbjct: 324 IAGYAREGLSDMSVRLFHEMEKE-GISPDIFTITTILHACACTGLLENGKDVHNYIKENK 382
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
++ + NAL+DMY KCG + + A +F
Sbjct: 383 MQSDLFVSNALMDMYAKCGSMGD-------------------------------AHSVFS 411
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
V+DIV W MI GY + + +EA+ LF EMQ KP+ + +L CA L ALE+
Sbjct: 412 EMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY-NSKPNSITMACILPACASLAALER 470
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G+ IHG+I N ++D VA AL++MY KCG + A +F + EKD SWT +I G M
Sbjct: 471 GQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGM 530
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G ++A+ F++M + G +PD+++FI +L ACSH GL+DEG FFN M I+PK E
Sbjct: 531 HGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSE 590
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY C++DLL RAG L +A + I+ +P E + I +GALL CRIY +V + EK+A +
Sbjct: 591 HYACIVDLLARAGNLSKAYKFIKMMPIEPDATI---WGALLCGCRIYHDVKLAEKVAEHV 647
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E +++ ++ LLANIYA A +WE+V +R+++ G+RK PGCS IEI G +H F+ G
Sbjct: 648 FELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTG 707
Query: 580 DPSHSEMKEIYSMLDR 595
D SH +I +L +
Sbjct: 708 DSSHPLANKIELLLKK 723
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 189/367 (51%), Gaps = 42/367 (11%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GNL A ++F ++ ++++ +I +A++G S+ LF ++ + G+SPD FT +
Sbjct: 300 GNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTIL 359
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A G ++ G+ VH Y+ + ++ D +V N++MDMY G + + +F EM KD+V
Sbjct: 360 HACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIV 419
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G+ K +A+++F M+ N P+ T+ L AC +L LE G+EIH +
Sbjct: 420 SWNTMIGGYSKNSLPNEALNLFVEMQY--NSKPNSITMACILPACASLAALERGQEIHGH 477
Query: 216 I-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I + NAL+DMY KCG L AR LFD +P K+++ WT M++GY
Sbjct: 478 ILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY--------- 528
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
++GY EA+A F EM+ ++PD+ +++L C+
Sbjct: 529 -----------------GMHGYGS-----EAIAAFNEMRNSGIEPDEVSFISILYACSHS 566
Query: 335 GALEQGKWIHGYINENR----ITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAAS 389
G L++G W G+ N R I + ++++ A+ G + KA + + E DA
Sbjct: 567 GLLDEG-W--GFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATI 623
Query: 390 WTSIICG 396
W +++CG
Sbjct: 624 WGALLCG 630
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 163/312 (52%), Gaps = 20/312 (6%)
Query: 192 TVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T S L C LK+++ G+ IH I + ++E ++G+ L+ MY CG L E R +FD++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 251 PNKNVICWTSMVSGYVNCG------------------QLEKARDLFDRSPVRDIVLWTAM 292
N+ V W +++GY G ++E AR LFD RD++ W +M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I+GYV ++ + LF +M ++ + D +V+++ GC+ G L G+ +HGY +
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
+ + L++MY+K G + A+++F + E+ SWTS+I G A G + ++ LF +
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M G PD T +L AC+ GL++ G+ N + E ++Q L L+D+ + G
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKE-NKMQSDLFVSNALMDMYAKCG 401
Query: 473 LLDEAEELIRKI 484
+ +A + ++
Sbjct: 402 SMGDAHSVFSEM 413
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 327/572 (57%), Gaps = 42/572 (7%)
Query: 36 GNLLYAE--KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPF 93
G++++A K+F + L+ + L+I FA+ G R ++ LF + G PD FTY
Sbjct: 2 GSVIWAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 61
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG---VLGKICNVKKLFDEMP 150
V A LG + G+++H V++ GL D V S++DMY G + + +K+F++MP
Sbjct: 62 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 121
Query: 151 DKDVVSWNVSISGHVKCMRFE-DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
+ +V+SW I+ + + + +A+++F +M G ++ P+ + S L AC L + G
Sbjct: 122 EHNVMSWTAIITAYAQSGECDKEAIELFCKMISG-HIRPNHFSFSSVLKACGNLSDPYTG 180
Query: 210 KEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
++++ Y + + +GN+L+ MY + G
Sbjct: 181 EQVYSYAVKLGIASVNCVGNSLISMYARSG------------------------------ 210
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
++E AR FD +++V + A+++GY + + +EA LF E+ + F +LL
Sbjct: 211 -RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLL 269
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+G A +GA+ +G+ IHG + + + + ALI MY++CG IE A ++F E+ +++
Sbjct: 270 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 329
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
SWTS+I G A +G +ALE+F +M+ G KP++IT++ VLSACSH G++ EG++ FN+M
Sbjct: 330 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 389
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+ + I P++EHY C++DLLGR+GLL EA E I +P + ++ + LL ACR++GN
Sbjct: 390 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV---WRTLLGACRVHGN 446
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
++G A ++ + E D + + LL+N++ASA +W+DV +R+ MKE + K GCS IE
Sbjct: 447 TELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIE 506
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+ +H F VG+ SH + +IY LD++A +
Sbjct: 507 VENRVHRFHVGETSHPQAWQIYQELDQLASKI 538
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 208/429 (48%), Gaps = 51/429 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
KQ+ +++ ++GL + L+ ++ + G++ + K+F + ++++ +I A+
Sbjct: 76 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 135
Query: 64 AKKGSFRKSLL-LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
A+ G K + LF K+ + P++F++ V KA G L + GE+V+ Y VK G+
Sbjct: 136 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 195
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
V NS++ MY G++ + +K FD + +K++VS+N + G+ K ++ E+A +F
Sbjct: 196 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF----- 250
Query: 183 GCNLMPDEG------TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYC 235
N + D G T S LS ++ + G++IH R + + + NAL+ MY
Sbjct: 251 --NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
+CG + A ++F+EM ++NVI WTSM++G+ G +A ++F +
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK--------------- 353
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITV 354
M KP++ VA+L+ C+ +G + +G K + E+ I
Sbjct: 354 ----------------MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 397
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQM 413
++++ + GL+ +A+E + DA W +++ ++G N L +
Sbjct: 398 RMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG--NTELGRHAAE 455
Query: 414 ISGGAKPDD 422
+ +PDD
Sbjct: 456 MILEQEPDD 464
>gi|449476231|ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like, partial [Cucumis sativus]
Length = 472
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/492 (38%), Positives = 282/492 (57%), Gaps = 47/492 (9%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
+S ++FT+ + KA +L + +KG ++H +++K+G D ++ NS++ Y + G + +
Sbjct: 14 ISHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSAS 73
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
+FD +PD DVVSW ISG K ++A+ F M N+ P+ T+V+ LS C++L
Sbjct: 74 LIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSM----NVRPNSTTLVTALSTCSSL 129
Query: 204 KNLELGKEIH----RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
+ L+LGK IH R +N+E I+ NALLD Y
Sbjct: 130 RCLKLGKAIHGLRMRTLNEE---NVILENALLDFY------------------------- 161
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLK 318
V C L A +LF++ P RD+V WT MI GY Q +EAV +F+ M +
Sbjct: 162 ------VRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAI 215
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALE 377
P++ LV +L+ C+ + AL G+W+H YIN + +D V ALI MY KCG +E A+
Sbjct: 216 PNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAIL 275
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
IF KD SW++II GLAMNG +A LFS M+ G PDD+TF+G+LSACSHGGL
Sbjct: 276 IFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGL 335
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
+++G F M +VY I P++ HY C++D+ G+AGLLDEAE I+++P E P++G
Sbjct: 336 INQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEG---PVWG 392
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
ALL AC+++GN EK+ L + LL+N YA +RW D +VR M+ G
Sbjct: 393 ALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACCDRWNDANDVRVAMRSRG 452
Query: 558 VRKVPGCSSIEI 569
++K+ G S IE+
Sbjct: 453 LKKMAGRSWIEM 464
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 193/404 (47%), Gaps = 40/404 (9%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
+I A + + G + N L+ F + G++ A IF SI P ++++ +I +K
Sbjct: 39 EIHAHLIKSGHLSDIFIQNSLLHF--YILDGDVSSASLIFDSIPDPDVVSWTSIISGLSK 96
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G F K L SK V P++ T L +K G+ +HG ++T E + +
Sbjct: 97 LG-FEKEAL--SKFLSMNVRPNSTTLVTALSTCSSLRCLKLGKAIHGLRMRTLNEENVIL 153
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N+++D Y + + + LF++MP +DVVSW I G+ + E+AV VF+ M
Sbjct: 154 ENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGE 213
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYIN--QELEFTPIMGNALLDMYCKCGCLSEA 243
+P+E T+V+ LSAC+++ L LG+ +H YIN ++ +GNAL++MY KCG + A
Sbjct: 214 AIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMA 273
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+F +K+++ W++++SG +NG +
Sbjct: 274 ILIFKATEHKDIVSWSTIISGLA--------------------------MNGLGK----- 302
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE-NRITVDAVVATAL 362
+A LF M + + PD + LL+ C+ G + QG + + + I+ +
Sbjct: 303 QAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACM 362
Query: 363 IEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINK 405
++MY K GL+++A E+ E + W +++ ++G K
Sbjct: 363 VDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKK 406
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 200/572 (34%), Positives = 320/572 (55%), Gaps = 18/572 (3%)
Query: 3 QLKQIQAQIFQIGLQQ-NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q KQ+ A I GL P ++++ ++ S Y + +SP ++ I+
Sbjct: 19 QAKQVHALILIHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHSKSPDSFSWACAIR 78
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ G F+++ L+ +++ G+ P F KA + G +HG V K G
Sbjct: 79 FSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFGFSG 138
Query: 122 D---TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
YV +++D Y LG + +K+FDEM +++VVSWN ++G++K A VF
Sbjct: 139 GGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFD 198
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
+ Q D + S +S ++E + Q E NA++ Y + G
Sbjct: 199 EIPQ-----KDVISWNSMISGYARAGDMEKALSL---FQQMPERNFASWNAMISGYVEFG 250
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ AR FD MP +N + W +M+SGY CG ++ A +LFD+ +D++L+ AMI Y Q
Sbjct: 251 DIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQ 310
Query: 299 FNRFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+R EA+ LF M + ++PD+ L ++++ C+QLG L G WI Y+ I +D
Sbjct: 311 NSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDG 370
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ATAL+++YAKCG I+KA E+F+ LR+KD ++T++I G +NGK A++LF +M+
Sbjct: 371 HLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDA 430
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
P+ ITFIG+L+A +H GLV+EG F +M + Y + P ++HYG ++DL GRAG L E
Sbjct: 431 QIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQE 489
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A ELI+ +P + + ++GALL ACR++ NV+ GE A ++E + + +LL+NI
Sbjct: 490 ALELIKSMPMQPH---AGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNI 546
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
YAS RW+DV +R+ KE G K+PGCS +E
Sbjct: 547 YASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 253/394 (64%), Gaps = 4/394 (1%)
Query: 208 LGKEIHRYINQELEFT-PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
L +H Q T P + + + MY G + R F E+ + +V+C T+M+
Sbjct: 142 LAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVTAMLGALS 201
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G ++ AR+LFD P RD V W AM+ GYV+ R EA+ LF EMQ + + LV+
Sbjct: 202 AGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVS 261
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
+LT CAQ+GALE+G W+H Y+ + V + TAL++MY+KCG++ ++E+F +RE++
Sbjct: 262 VLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERN 321
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+WTS + GLAMNG + LELF +M S G +P+ +TF+ VL CS GLV+EGR F+
Sbjct: 322 IYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFD 381
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+M + ++++P LEHYGC++DL GRAG LD+A + I +P E +E + +GALL+A RI+
Sbjct: 382 SMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGV---WGALLNASRIH 438
Query: 507 GNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
NVD+G+ L +IESK+ + H LL+NIYA ++ W+ V+ VR MK GV+K+PGCS+
Sbjct: 439 NNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSA 498
Query: 567 IEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
IE++G +HEF VG SH K+I +ML M+ L
Sbjct: 499 IEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRL 532
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 173/394 (43%), Gaps = 83/394 (21%)
Query: 49 QSPC-LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK- 106
Q P LLA+N L++A A+ L F+ RE ++PD++++ F+ +A L
Sbjct: 74 QRPATLLAHNGLLRALARGPC---PGLAFAAFRELPLAPDHYSFTFLVRAATSLAAAASA 130
Query: 107 ------------GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV------------ 142
VH + G D +V + + MY +G + V
Sbjct: 131 TPVPTDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDV 190
Query: 143 -------------------KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
++LFD MP +D V+WN ++G+V+ R +A+ +F M Q
Sbjct: 191 VCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEM-QK 249
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
+ E T+VS L+AC + LE G +H Y+ ++ + + +G AL+DMY KCG ++
Sbjct: 250 AGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTM 309
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
+ E+F+ M +N+ WTS +SG G E
Sbjct: 310 SMEVFETMRERNIYTWTSALSGLAMNGMGE------------------------------ 339
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVVATA 361
E + LF+ M+ ++P+ VA+L GC+ G +E+G+ + +++++
Sbjct: 340 -ECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGC 398
Query: 362 LIEMYAKCGLIEKALEIFYELR-EKDAASWTSII 394
++++Y + G ++ A++ + E W +++
Sbjct: 399 MVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALL 432
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A ++F + +A+N ++ + + G R++L LF ++++ GV+ T V
Sbjct: 204 GDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVL 263
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +G +++G VH YV G+ + +++DMY G + ++F+ M ++++
Sbjct: 264 TACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIY 323
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W ++SG E+ +++F+RM + + P+ T V+ L C+ +E G+
Sbjct: 324 TWTSALSGLAMNGMGEECLELFKRM-ESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDS 382
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
+ + + P + + ++D+Y + G L +A + + MP
Sbjct: 383 MKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMP 420
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/470 (38%), Positives = 274/470 (58%), Gaps = 20/470 (4%)
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+F ++ + WN I H + ++ F +M + PD T L+ACT+
Sbjct: 82 VFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLL-TDSRPDAHTYSFLLAACTSSL 140
Query: 205 NLELGKEIHRYI--NQELEFTPIMGNALLDMYCKC-----GCLSEARELFDEMPNKNVIC 257
+L G+++H + N + + L++ Y L+ AR++FD+M +NV+C
Sbjct: 141 SLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSERNVVC 200
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W SM++GY+ G L+ AR +F P R++V WT MI+GY + + +A+ LF +M+ +
Sbjct: 201 WNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGV 260
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV----ATALIEMYAKCGLIE 373
+ D+ +L+A LT CA+LG L+ G WIH YI + + + V ALI MYA CG+I+
Sbjct: 261 ELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYASCGMID 320
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG---AKPDDITFIGVLS 430
+A E+F + E+ A SWTS+I A G LE+F M G A+PD ITFIGVL
Sbjct: 321 EAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLC 380
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
ACSH GLVDEGR+ F M + + I+P++EHYGC++DLL RAG LDEA+ELI +P + N
Sbjct: 381 ACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELIATMPVKPNN 440
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALL--EKIESKDSSFHTLLANIYASANRWEDVTN 548
+ +GALL CR Y N ++ ++ L E K + + +LLA +YASA +W+DV
Sbjct: 441 AV---WGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYASAEKWQDVAT 497
Query: 549 VRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
VRQKM MGV+K G S ++IN + H+ + GD +H IY ML ++ +
Sbjct: 498 VRQKMVAMGVKKPAGQSWVQINEVFHDSVAGDRTHENTSSIYEMLGKIPQ 547
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 204/452 (45%), Gaps = 92/452 (20%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
++ S +LL A +F IQSP + +N +I+A A+ + KS+ F+++ PD T
Sbjct: 69 SNSSAHHLLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHT 128
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLE------------------------------ 120
Y F+ A +++G++VH V+ G
Sbjct: 129 YSFLLAACTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARK 188
Query: 121 -FD-----TYVC-NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
FD VC NS++ Y G + +++F EMP+++VVSW ISG+ K + + A
Sbjct: 189 VFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQA 248
Query: 174 VDVFRRMRQ-GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-------NQELEFTPI 225
+++F +MR+ G L D+ +++ L+AC L +L++G IH YI NQ + +
Sbjct: 249 LNLFDQMRKAGVEL--DQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVS-- 304
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ NAL+ MY CG + EA E+F MP ++ + WTS+++ +
Sbjct: 305 LNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAK------------------ 346
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQII---RLKPDKFILVALLTGCAQLGALEQGKW 342
GY Q + +FR MQ + +PD + +L C+ G +++G+
Sbjct: 347 --------QGYAQ-----AVLEIFRSMQRLGTSEARPDGITFIGVLCACSHAGLVDEGRQ 393
Query: 343 I-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-DAASWTSII--CGLA 398
+ I I ++++ ++ G +++A E+ + K + A W +++ C
Sbjct: 394 LFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELIATMPVKPNNAVWGALLGGCRFY 453
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLS 430
N ++ L SQ + A+PD G LS
Sbjct: 454 RNAEL---ASLVSQKLV--AEPDPDKAAGYLS 480
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 191/504 (37%), Positives = 294/504 (58%), Gaps = 20/504 (3%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+ ++H V+ ++ D V + Y G++ L PD V + +I
Sbjct: 36 SASRAAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIH 95
Query: 163 GHVKCMRFEDAVDVFRRM---RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQ 218
H A+ + M R G L+P T+ ++L AC L +G+ +H Y +
Sbjct: 96 AHSSRGLHRAALALLSEMLLSRHG--LLPTAHTLSASLPACGCLA---VGRALHGYAVKL 150
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDL 277
L P + ALL MY + G + AR LFD M P+ +V+ T+M+S Y GQL+ AR L
Sbjct: 151 ALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGL 210
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FD P +D+V W AM++GY Q R EA+ LFR+M ++PD+ +V L+ AQLG
Sbjct: 211 FDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTA 270
Query: 338 EQGKWIHGYI----NENRITVDAVVATALIEMYAKCGLIEKALEIFYELR---EKDAASW 390
E G+W+H ++ R+ ++A V TAL++MY KCG +E+A+ +F +L ++D +W
Sbjct: 271 ESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAW 330
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I G AM+G+ +ALE F Q+ + G P DITFIGVL+ACSH GLVDEGR F M E
Sbjct: 331 NAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEE 390
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
Y I PK+EHYGC++DLLGRAG ++EA +L++ + + + ++ +LL ACR++ N+
Sbjct: 391 EYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPD---AAMWASLLGACRLHKNLA 447
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+G+++A L +S + LL+N+YA+A +W +V VR M+ GV+K PGCS++E+
Sbjct: 448 LGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVG 507
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLD 594
+ EF+ GD SH EIY+ L+
Sbjct: 508 RRVVEFVAGDRSHPRSAEIYAKLE 531
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 147/315 (46%), Gaps = 21/315 (6%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G++ +P ++ + + G L A +F ++ L+ +N ++ + + G ++L
Sbjct: 181 GMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALR 240
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG----LEFDTYVCNSIM 130
LF ++ GV PD + AV LG + G +H +V G + + V +++
Sbjct: 241 LFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALV 300
Query: 131 DMYGVLGKICNVKKLFDEM---PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNL 186
DMY G + +F ++ D+DVV+WN I+G+ R +A++ F ++R QG L
Sbjct: 301 DMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQG--L 358
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEAR 244
P + T + L+AC+ ++ G+ + + +E P + + ++D+ + G + EA
Sbjct: 359 WPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAF 418
Query: 245 ELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING--YVQFNR 301
+L M K + W S++ C +L K L R V D ++ + N YV +
Sbjct: 419 DLVQSMKAKPDAAMWASLLGA---C-RLHKNLALGQR--VADYLVGNGLANSGTYVLLSN 472
Query: 302 FDEAVALFREMQIIR 316
A +RE+ +R
Sbjct: 473 MYAAAGKWREVGRVR 487
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 322/565 (56%), Gaps = 40/565 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + L+ + L+I FA+ G R ++ LF + G PD FTY V A
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG---VLGKICNVKKLFDEMPDKDVVSW 157
LG + G+++H V++ GL D V S++DMY G + + +K+F++MP+ +V+SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 158 NVSISGHVKCMRFE-DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY- 215
I+ + + + +A+++F +M G ++ P+ + S L AC L + G++++ Y
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISG-HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ + +GN+L+ MY + G ++E AR
Sbjct: 183 VKLGIASVNCVGNSLISMYARSG-------------------------------RMEDAR 211
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
FD +++V + A+++GY + + +EA LF E+ + F +LL+G A +G
Sbjct: 212 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 271
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
A+ +G+ IHG + + + + ALI MY++CG IE A ++F E+ +++ SWTS+I
Sbjct: 272 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 331
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A +G +ALE+F +M+ G KP++IT++ VLSACSH G++ EG++ FN+M + + I
Sbjct: 332 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 391
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P++EHY C++DLLGR+GLL EA E I +P + ++ + LL ACR++GN ++G
Sbjct: 392 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV---WRTLLGACRVHGNTELGRHA 448
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A ++ + E D + + LL+N++ASA +W+DV +R+ MKE + K GCS IE+ +H
Sbjct: 449 AEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHR 508
Query: 576 FLVGDPSHSEMKEIYSMLDRMAKTL 600
F VG+ SH + +IY LD++A +
Sbjct: 509 FHVGETSHPQAWQIYQELDQLASKI 533
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 208/429 (48%), Gaps = 51/429 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
KQ+ +++ ++GL + L+ ++ + G++ + K+F + ++++ +I A+
Sbjct: 71 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 130
Query: 64 AKKGSFRKSLL-LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
A+ G K + LF K+ + P++F++ V KA G L + GE+V+ Y VK G+
Sbjct: 131 AQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 190
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
V NS++ MY G++ + +K FD + +K++VS+N + G+ K ++ E+A +F
Sbjct: 191 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF----- 245
Query: 183 GCNLMPDEG------TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYC 235
N + D G T S LS ++ + G++IH R + + + NAL+ MY
Sbjct: 246 --NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
+CG + A ++F+EM ++NVI WTSM++G+ G +A ++F +
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK--------------- 348
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITV 354
M KP++ VA+L+ C+ +G + +G K + E+ I
Sbjct: 349 ----------------MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 392
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQM 413
++++ + GL+ +A+E + DA W +++ ++G N L +
Sbjct: 393 RMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG--NTELGRHAAE 450
Query: 414 ISGGAKPDD 422
+ +PDD
Sbjct: 451 MILEQEPDD 459
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 205/582 (35%), Positives = 327/582 (56%), Gaps = 37/582 (6%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
++++ I F + G ++L LF +L E GV P++ T+ V +A G LG+ G + G
Sbjct: 149 VVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILG 208
Query: 113 YVVKTGLEFDTYVCNS-------------------------------IMDMYGVLGKICN 141
VVK G E V NS I+D Y G +
Sbjct: 209 LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLRE 268
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
+++FDEMP+++ +SW+ I+ + + E+A+ +F +M Q P+ TLSA
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFKPNISCFACTLSALA 327
Query: 202 ALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
+L+ L G IH ++ + ++ +G++L+D+YCKCG + R +FD + KNV+CW S
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
MV GY G+LE+ +LF+ P ++ V W +I GY++ + ++ + +F + + P+
Sbjct: 388 MVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
K ++L CA + +L++G +HG I + I D V TAL +MYAKCG I + ++F
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVD 439
+ EK+ SWT +I GLA +G ++L LF +M + P+++ + VL ACSH GLVD
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVD 567
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
+G +FN+M +VY I+PK +HY C++DLL R+G L EAEE IR IP + + AL
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE---ANAWAAL 624
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
LS C+ Y + + E+ A L ++ +S+ + LL+NIYASA RW DV+N+R+ M+E G++
Sbjct: 625 LSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLK 684
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
K GCS +E+ +H F D SHS+ EIY L + +L
Sbjct: 685 KSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEML 726
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 199/432 (46%), Gaps = 64/432 (14%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR-- 179
D V N ++ Y G + + LFDEMP+++ VSW+ ISG +K R E+++ F R
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 180 --------------MRQGCN--------------LMPDEGTVVSTLSACTALKNLELGKE 211
+R G N + P++ T S + AC L + LG
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 212 I-HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
I + E + N+L+ + + G + AR +FD M ++V+ WT+++ YV G
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
L +AR +FD P R+ + W+AMI Y Q +EA+ LF +M KP+ L+
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
A L AL G IHG++ + I D + ++LI++Y KCG + +F + EK+ W
Sbjct: 326 LASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCW 385
Query: 391 TSIICGLAMNGKI-------------------------------NKALELFSQMISGGAK 419
S++ G ++NG++ K LE+F+ ++ G
Sbjct: 386 NSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQT 445
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+ TF VL AC+ +D+G + ++ IQ + L D+ + G + +++
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKIIKL-GIQYDIFVGTALTDMYAKCGDIGSSKQ 504
Query: 480 LIRKIPNENNEI 491
+ ++P E NEI
Sbjct: 505 VFERMP-EKNEI 515
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 183/399 (45%), Gaps = 73/399 (18%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A +IF + ++++ +I +++ G ++L LFSK+ + G P+ +
Sbjct: 264 GDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTL 323
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD-------- 147
A+ L + G +HG+V K G++ D ++ +S++D+Y GK + + +FD
Sbjct: 324 SALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVV 383
Query: 148 -----------------------EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+P+K+ VSW I+G+++ + E ++VF +
Sbjct: 384 CWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSG 443
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
P++ T S L AC ++ +L+ G +H + I +++ +G AL DMY KCG + +
Sbjct: 444 Q-TPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSS 502
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+++F+ MP KN I WT M+ G G
Sbjct: 503 KQVFERMPEKNEISWTVMIQGLAESGFAV------------------------------- 531
Query: 304 EAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR----ITVDAVV 358
E++ LF EM+ + P++ +L+++L C+ G +++G W Y N I
Sbjct: 532 ESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLW---YFNSMEKVYGIKPKGKH 588
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICG 396
T ++++ ++ G + +A E + + +A +W +++ G
Sbjct: 589 YTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 198/598 (33%), Positives = 320/598 (53%), Gaps = 39/598 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI + + G Q N + + G++ YA ++FG ++ L+++N +I A
Sbjct: 317 KQIHGAVVRFGWDQFVSVANSAINM--YVKAGSVNYARRMFGQMKEVDLISWNTVISGCA 374
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVK-KGEKVHGYVVKTGLEFDT 123
+ G SL LF L G+ PD FT V +A L E G +VH +K G+ D+
Sbjct: 375 RSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS 434
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V +++D+Y GK+ + LF D+ SWN + G + +A+ +F M +
Sbjct: 435 FVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHER 494
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
D+ T + A L L+ GK+IH I + + + +LDMY KCG
Sbjct: 495 GE-KADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCG---- 549
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
+++ AR +F++ P D V WT +I+G V+
Sbjct: 550 ---------------------------EMKSARKVFNQIPSPDDVAWTTVISGCVENGEE 582
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
++A+ + +M++ ++PD++ L+ C+ L ALEQGK IH I + D V T+L
Sbjct: 583 EQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSL 642
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++MYAKCG IE A +F + + A W ++I GLA +G +AL F++M S G PD
Sbjct: 643 VDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+TFIGVLSACSH GL + + F++M + Y ++P++EHY CL+D L RAG + EAE+++
Sbjct: 703 VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVS 762
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P E + +Y LL+ACR+ G+ + GE++A L ++ DS+ + LL+NIYA+AN+
Sbjct: 763 SMPFEAS---ATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQ 819
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
WE+ + R MK + V+K PG S I++ +H F+ GD SH E IY+ ++ + K +
Sbjct: 820 WENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRI 877
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 229/474 (48%), Gaps = 41/474 (8%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
YA K+F + +N + ++ + G +++ F + + V D+ TY + V
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVA 308
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L ++ G+++HG VV+ G + V NS ++MY G + +++F +M + D++SWN
Sbjct: 309 SLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNT 368
Query: 160 SISGHVKCMRFEDAVDVF-RRMRQGCNLMPDEGTVVSTLSACTALK-NLELGKEIHRYIN 217
ISG + E ++ +F +R G L+PD+ T+ S L AC++L+ + +G+++H
Sbjct: 369 VISGCARSGLEECSLRLFIDLLRSG--LLPDQFTITSVLRACSSLEESYCVGRQVHT--- 423
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
C +A + D + T+++ Y G++E+A L
Sbjct: 424 ---------------------CALKAGIVLDSFVS------TALIDVYSKGGKMEEAELL 456
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
F D+ W AM++G+ + + EA+ LF M K D+ L L
Sbjct: 457 FHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRL 516
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
+QGK IH + + R D V + +++MY KCG ++ A ++F ++ D +WT++I G
Sbjct: 517 QQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF-NTMTEVYQIQP 456
NG+ +AL + QM G +PD+ TF ++ ACS +++G++ N M P
Sbjct: 577 VENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP 636
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
+ L+D+ + G +++A L R++ N V L+ A++ +GN +
Sbjct: 637 FV--MTSLVDMYAKCGNIEDAYGLFRRM----NTRSVALWNAMIVGLAQHGNAE 684
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 188/432 (43%), Gaps = 61/432 (14%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWNVSISGH 164
G++ H +V +GL D YV N+++ MY G + + +KLFD P D+D+V++N ++ +
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 165 VKCMRFED------AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-IN 217
D A +FR +RQ ++ T+ C + + + Y +
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSV-MLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
L++ + AL+++Y K + EAR LFD MP ++V+ W M+ YV G ++ L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210
Query: 278 FD---RSPVR----------------------------------------DIVLWTAMIN 294
F RS +R D+ +W ++
Sbjct: 211 FSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLS 270
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
Y+Q EAV FR+M R+ D + +L+ A L LE GK IHG +
Sbjct: 271 SYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQ 330
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
VA + I MY K G + A +F +++E D SW ++I G A +G +L LF ++
Sbjct: 331 FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLL 390
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDE----GRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
G PD T VL ACS ++E GR+ + + LID+ +
Sbjct: 391 RSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCALKAGIVLDSFVSTA-LIDVYSK 446
Query: 471 AGLLDEAEELIR 482
G ++EAE L
Sbjct: 447 GGKMEEAELLFH 458
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 150/649 (23%), Positives = 266/649 (40%), Gaps = 109/649 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFG-SIQSPC-LLAYNLLIKA 62
K+ A I GL + N L+ + G+L A K+F + QS L+ YN ++ A
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITM--YAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 63 FAKKGSFR------KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
+A G ++ +F LR+ + T +FK G E + GY VK
Sbjct: 91 YAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
GL++D +V +++++Y +I + LFD MP +DVV WNV + +V+ ++ + +
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG--------- 227
F + L PD C +++ + +G +ELE
Sbjct: 211 FSAFHRS-GLRPD----------CVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDD 259
Query: 228 ------NALLDMYCKCGCLSEARELFDEMPNKNVIC------------------------ 257
N L Y + G EA + F +M V C
Sbjct: 260 SDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI 319
Query: 258 --------WTSMVS-------GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
W VS YV G + AR +F + D++ W +I+G +
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQL-GALEQGKWIHGYINENRITVDAVVATA 361
+ ++ LF ++ L PD+F + ++L C+ L + G+ +H + I +D+ V+TA
Sbjct: 380 ECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTA 439
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI++Y+K G +E+A +F+ D ASW +++ G ++ +AL LFS M G K D
Sbjct: 440 LIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKAD 499
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
ITF A + +G++ + ++ + L ++D+ + G + A ++
Sbjct: 500 QITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGILDMYLKCGEMKSARKVF 558
Query: 482 RKIPN--------------ENNEIIVPL-----------------YGALLSACRIYGNVD 510
+IP+ EN E L + L+ AC + ++
Sbjct: 559 NQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALE 618
Query: 511 MGEKLAALLEKIESK-DSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
G+++ A + K+ D T L ++YA ED + ++M V
Sbjct: 619 QGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQI A I ++ +P + L+ + GN+ A +F + + + +N +I
Sbjct: 617 LEQGKQIHANIMKLNCAFDPFVMTSLVDM--YAKCGNIEDAYGLFRRMNTRSVALWNAMI 674
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT-GL 119
A+ G+ ++L F++++ RGV+PD T+ V A G K + KT G+
Sbjct: 675 VGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGV 734
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E + + ++D G I +K+ MP FE + ++R
Sbjct: 735 EPEIEHYSCLVDALSRAGHIQEAEKVVSSMP-------------------FEASATMYRT 775
Query: 180 MRQGCNLMPDEGT 192
+ C + D+ T
Sbjct: 776 LLNACRVQGDKET 788
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 215/613 (35%), Positives = 342/613 (55%), Gaps = 21/613 (3%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQ-SPCLLAYNLLIK 61
Q KQ+ AQI + L +++L+ F NL A+ +F +P + YN +I
Sbjct: 48 QFKQVLAQIMRFNLIGVTFPMSRLIFFSAITYPENLDLAKLLFLDFTPNPNVFVYNTMIS 107
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LE 120
A + S + L+S + VSPD T+ + KA +L EVK+ +H +++ +G L
Sbjct: 108 AVSS--SKNECFGLYSSMIRYRVSPDRQTFLHLMKASSFLSEVKQ---IHCHIIVSGCLS 162
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
Y+ NS++ Y LG + +K+F MP DV S+NV I G+ K +A++++ +M
Sbjct: 163 LGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMIVGYAKQGFGLEALELYYKM 222
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE---LEFTPIMGNALLDMYCKC 237
+ PDE T++ L C L ++ LGK +H +I + I+ NALLDMY KC
Sbjct: 223 VSD-GIEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKC 281
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
A+ FD + K++ W +MV G+V G +E A+ +FD+ P RD+V W +++ Y
Sbjct: 282 KESGLAKRAFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYS 341
Query: 298 QFNRFDEAV-ALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+ AV LF EM I+ ++KPD+ +V+L++G A G L G+W+HG + ++ D
Sbjct: 342 KKGCDQRAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQLEGD 401
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
A +++ALI+MY KCGLIE+A +F EKD WTS+I G A +G +AL+LF +M
Sbjct: 402 AFLSSALIDMYCKCGLIERAFMVFKTATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQE 461
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
P+ +T + VL+ACSH GLV+EG F M E + P+ EHYG L+DLL RAG L+
Sbjct: 462 EDVTPNKVTLLAVLTACSHSGLVEEGLHVFYHMKEKFGFHPETEHYGSLVDLLCRAGRLE 521
Query: 476 EAEELIR-KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EA+++++ K+P ++ ++G++LSACR +++ E + L K+E + + LL+
Sbjct: 522 EAKDIVQNKMPMRPSQ---SMWGSILSACREGEDIETAELALSELLKLEPEKEGGYVLLS 578
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD----PSHSEMKEIY 590
NIYA+ RW R+ M+ GV+K G SS+ +H F+ + P +E+K I
Sbjct: 579 NIYATVGRWGYSDKTREAMESRGVKKTAGYSSVVGVEGVHSFVAAEKQNHPRWTEIKRIL 638
Query: 591 SMLDRMAKTLLDS 603
L K+ + S
Sbjct: 639 QHLHNEMKSKIGS 651
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 211/667 (31%), Positives = 353/667 (52%), Gaps = 93/667 (13%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
T L Q+ A +F GL ++P KL+ ++ G ++++F + P + +LIK
Sbjct: 362 TTLTQLHAHLFITGLHRHPPASTKLIE--SYAQIGIFESSKRVFDTFPKPDSFMWGVLIK 419
Query: 62 AF---------------------------------------------AKKGSFRKSLLLF 76
+ K G + L +F
Sbjct: 420 CYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMF 479
Query: 77 SKLRERGVSPDNFTYPFVFKA--------VGWLGEVKKGEKVHGYVVKTGLEFD-TYVCN 127
S++ V PD+ T V +A +G LG VK+G VHG+V++ ++ + ++
Sbjct: 480 SQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGP 539
Query: 128 SIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLM 187
++M++Y G + + K+F+ + +K ++SWN IS + + E+A+ +F +M Q LM
Sbjct: 540 ALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM-QTQGLM 598
Query: 188 PDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
PD ++ S+LSAC + +LG +IH YI + F + NAL+DMY KC
Sbjct: 599 PDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKC---------- 648
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
G + A +F++ + +V W +MI G+ Q EA+
Sbjct: 649 ---------------------GFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAIT 687
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
LF +M + +K DK ++++ C+ LG LE+GKW+H + + D+ + TAL +MY+
Sbjct: 688 LFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYS 747
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG ++ A +F + E+ SW+ +I G M+G+IN + LF+QM+ G KP+DITF+
Sbjct: 748 KCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMH 807
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
+LSACSH G V+EG+ +FN+M+E + ++PK +H+ C++DLL RAG L+ A ++I +P
Sbjct: 808 ILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFP 866
Query: 488 NNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVT 547
N I +GALL+ CRI+ +D+ + + L +++ D+ ++TLL+NIYA W+
Sbjct: 867 ANSSI---WGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFG 923
Query: 548 NVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNA 607
VR MK G+RKVPG S+IEI+ I+ F GD SHS+ K+IY L+ ++L+ ++
Sbjct: 924 KVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENF-RSLVHAQVYD 982
Query: 608 MEGDNLV 614
E DN +
Sbjct: 983 SEPDNSI 989
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 56/207 (27%)
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA L Q +H ++ + +T LIE YA+ G+ E + +F + D+ W
Sbjct: 358 CATSTTLTQ---LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMW 414
Query: 391 TSII-CGL--------------------------------------------AMNGKINK 405
+I C + NG+ ++
Sbjct: 415 GVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASE 474
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR-------RFFNTMTEVYQIQPKL 458
L++FSQMIS +PD +T + V ACS G + GR R + + P+L
Sbjct: 475 GLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPEL 534
Query: 459 EHYG-CLIDLLGRAGLLDEAEELIRKI 484
+ G L++L G L + ++ I
Sbjct: 535 DFLGPALMELYADTGNLRDCHKVFETI 561
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 189/501 (37%), Positives = 286/501 (57%), Gaps = 21/501 (4%)
Query: 110 VHGYVVKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+HG + K GL +++ +++ Y LG+ + + LFDEMPD +V+ H
Sbjct: 33 IHGLLFKEGLLHAGSHLPTALLSAYAALGRPRHARDLFDEMPDPGLVTRTAMARAHAASG 92
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL----------GKEIHRYI-N 217
+ A+ VF M ++PD + L+AC + GK +H I
Sbjct: 93 QTAQALAVFGDMLAD-GVLPDNVALAVALAACHGTGSFPAALGMAAARRPGKMVHALIVT 151
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ + L+ +Y + G L +R LFD MP K+ + W +MV Y+ + A +L
Sbjct: 152 SGIVPDVFVSTELIRLYGEYGELLVSRRLFDAMPVKSTVSWNAMVHQYIRHSNVGDAYEL 211
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM---QIIRLKPDKFILVALLTGCAQL 334
F P RD+V W +I GY RF EA+ LFR+M + P+ + +L CA
Sbjct: 212 FLAMPKRDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCPVHPNGPTISTVLAACAGA 271
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSI 393
G LE G W+H YI+ NR+ D + +LI+MYAKCG IEKAL++F + ++D SWT++
Sbjct: 272 GCLETGIWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYSWTTV 331
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
ICGLAM+GK AL +F M G +PDD+T +GVL+AC+HGGLVDEG F ++ E Y
Sbjct: 332 ICGLAMHGKAADALRMFGMMQDNGIRPDDVTLVGVLNACAHGGLVDEGLHHFYSL-EKYA 390
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I PK+EHYGC+IDLLGR G L EA +IR + + N +I +GA L+AC+++ NV++GE
Sbjct: 391 ITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRMKPNAVI---WGAFLNACKVHSNVELGE 447
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
AA L +++ D +L+++YA A W + R++M + ++K PGCSSIE++G +
Sbjct: 448 IAAAELTRLDPDDPWAKVMLSSLYAKAQDWSSLARERREMNSLQMKKTPGCSSIELDGEV 507
Query: 574 HEFLVGDPSHSEMKEIYSMLD 594
HEF+ G H + EI ++L+
Sbjct: 508 HEFVAGSFQHPQHGEICTVLE 528
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 197/453 (43%), Gaps = 90/453 (19%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I +F+ GL L ++ + + G +A +F + P L+ + +A A
Sbjct: 33 IHGLLFKEGLLHAGSHLPTALL-SAYAALGRPRHARDLFDEMPDPGLVTRTAMARAHAAS 91
Query: 67 GSFRKSLLLFSKLRERGVSPDNF-------------TYPFVFKAVGWLGEVKKGEKVHGY 113
G ++L +F + GV PDN ++P A+G + G+ VH
Sbjct: 92 GQTAQALAVFGDMLADGVLPDNVALAVALAACHGTGSFP---AALGMAAARRPGKMVHAL 148
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK------- 166
+V +G+ D +V ++ +YG G++ ++LFD MP K VSWN + +++
Sbjct: 149 IVTSGIVPDVFVSTELIRLYGEYGELLVSRRLFDAMPVKSTVSWNAMVHQYIRHSNVGDA 208
Query: 167 ----------------------CM--RFEDAVDVFRRM--RQGCNLMPDEGTVVSTLSAC 200
C+ RF +A+++FR+M C + P+ T+ + L+AC
Sbjct: 209 YELFLAMPKRDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCPVHPNGPTISTVLAAC 268
Query: 201 TALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
LE G +H YI++ + + +L+DMY KCG + +A ++F++ P K
Sbjct: 269 AGAGCLETGIWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVFEKAPGK------ 322
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
RD+ WT +I G + +A+ +F MQ ++P
Sbjct: 323 ------------------------RDLYSWTTVICGLAMHGKAADALRMFGMMQDNGIRP 358
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALE 377
D LV +L CA G +++G +H + + + + + +I++ + G +++A
Sbjct: 359 DDVTLVGVLNACAHGGLVDEG--LHHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYS 416
Query: 378 IFYELREKDAASWTSIICGLAMNG-KINKALEL 409
I +R K A +I G +N K++ +EL
Sbjct: 417 IIRTMRMKPNA----VIWGAFLNACKVHSNVEL 445
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 197/606 (32%), Positives = 323/606 (53%), Gaps = 55/606 (9%)
Query: 41 AEKIFGSIQSPC---LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA 97
A K+FGS C L +N +I+A G ++L L+ K+R GV D FT+P + +A
Sbjct: 89 ARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRA 148
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
LG + +H +VV+ G + +V N ++ MY L ++ + +K+FD+M K VVSW
Sbjct: 149 SSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSW 208
Query: 158 NVSISG-----------------------------------HVKCMRFEDAVDVFRRMRQ 182
N +SG H +C E+ + +F +MR
Sbjct: 209 NTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRM 268
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLS 241
+ P + LS C L L G+ IH Y + NAL+ +Y K G +
Sbjct: 269 K-GVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVG 327
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR----------SPVRDIVLWTA 291
+A +LF EM KN++ W +++S + G +KA +L + P +++ W+A
Sbjct: 328 DAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKP--NVITWSA 385
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+I G+ +E++ +FR+MQ+ +K + + ++L+ CA L AL G+ +HG++ R
Sbjct: 386 IICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRAR 445
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + +V LI MY KCG + +F +L +D+ SW S+I G +G AL F+
Sbjct: 446 MDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFN 505
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
MI G +PD +TFI LSACSH GLV EG F+ M + ++I+P++EHY C++DLLGRA
Sbjct: 506 HMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRA 565
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
GL++EA +I+ +P E N I + +LL++CR++ + D+ E+ AA + + SK + H
Sbjct: 566 GLVEEASNIIKGMPMEPNAYI---WSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHM 622
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LL+NI+A++ RWED VR + G++KVPG S IE+ ++ F G ++++
Sbjct: 623 LLSNIFAASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMFKAGYTISEGLEKVDE 682
Query: 592 MLDRMA 597
+L +A
Sbjct: 683 ILHDLA 688
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 179/357 (50%), Gaps = 13/357 (3%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK---DVVSWNVS 160
++ ++VH V TG +V ++ +Y G + + +K+F P + + + WN
Sbjct: 51 IQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSI 110
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
I +V +A+ ++ +MR ++ D T L A + L + K +H ++ Q
Sbjct: 111 IRANVYHGYCIEALQLYGKMRN-YGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFG 169
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ +GN L+ MY K + +AR++FD+M K+V+ W +MVSGY + A +F
Sbjct: 170 FQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFH 229
Query: 280 RSPVRDI----VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+ + + V WT++++ + + +E + LF +M++ + P +L +L+ CA L
Sbjct: 230 QMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLA 289
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
L G+ IHGY+ + ALI +Y K G + A ++F+E++ K+ SW ++I
Sbjct: 290 TLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALIS 349
Query: 396 GLAMNGKINKALELFSQMISGGA----KPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
A +G +KALEL SQ+ A KP+ IT+ ++ + GL +E F M
Sbjct: 350 SFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKM 406
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 4/155 (2%)
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS--- 389
Q ++ K +H A V+ L+ +Y++ GL+ A ++F + ++
Sbjct: 47 QCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLL 106
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W SII +G +AL+L+ +M + G D TF +L A S+ G + + +
Sbjct: 107 WNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVV 166
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
+ + Q L LI + + +D+A ++ K+
Sbjct: 167 Q-FGFQNHLHVGNELIGMYAKLERMDDARKVFDKM 200
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 312/537 (58%), Gaps = 15/537 (2%)
Query: 45 FGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEV 104
FG ++ P L +N +IK+ + R++LLL + E GVS D F+ V KA LG V
Sbjct: 80 FGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K G ++HG++ KTGL D ++ N ++ +Y G + +++FD MP +D VS+N I G+
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EF 222
VKC A ++F +LMP E ++S S + G +I + ++ E
Sbjct: 198 VKCGLIVSARELF-------DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 250
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
I N+++D Y K G + +A+ LFD MP ++V+ W +M+ GY G + A+ LFD+ P
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGK 341
RD+V + +M+ GYVQ EA+ +F +M+ L PD LV +L AQLG L +
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H YI E + + + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A ++ Q+ KPDDITF+GVL+ACSH GLV EG F M ++I+P+L+HY
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 490
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++D+L R+G ++ A+ LI ++P E N++I + L+AC + + GE +A L
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPVEPNDVI---WRTFLTACSHHKEFETGELVAKHLIL 547
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ S + LL+N+YAS W+DV VR MKE + K+PGCS IE++G +HEF V
Sbjct: 548 QAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFV 94
G + +A+ +F + ++AYN ++ + + ++L +FS + +E + PD+ T V
Sbjct: 297 GFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 356
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A+ LG + K +H Y+V+ + +++DMY G I + +F+ + +K +
Sbjct: 357 LPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 416
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
WN I G E A D+ ++ + +L PD+ T V L+AC+ ++ G
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIER-LSLKPDDITFVGVLNACSHSGLVKEGLLCFE 475
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+ ++ + P + + ++D+ + G + A+ L +EMP N + W + ++ + +
Sbjct: 476 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEF 535
Query: 272 E 272
E
Sbjct: 536 E 536
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
F V D LW A+I + +A+ L M + DKF L +L C++LG +
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
+ G IHG++ + + D + LI +Y KCG + + ++F + ++D+ S+ S+I G
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 398 AMNGKINKALELF-------------SQMISGGAKPDD-----------------ITFIG 427
G I A ELF + MISG A+ D I++
Sbjct: 198 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNS 257
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
++ G +++ + F+ M + + + +ID + G + A+ L ++P+
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMP-----RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 312
Query: 488 N 488
+
Sbjct: 313 D 313
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 183/560 (32%), Positives = 320/560 (57%), Gaps = 8/560 (1%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
+A ++F S+ ++++N+++ A ++ G R++L + + RGV D+ TY A
Sbjct: 246 HALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACA 305
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L + G+++H V+++ D YV ++++++Y G +++F + D++ VSW V
Sbjct: 306 KLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTV 365
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIHRY-IN 217
I G ++ F +++++F +MR LM D+ + + +S C+ ++ L +++H +
Sbjct: 366 LIGGFLQYGCFSESLELFNQMR--AELMTVDQFALATIISGCSNRMDMCLARQLHSLSLK 423
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
++ N+L+ MY KCG L A +F M ++++ WT M++ Y G + KAR+
Sbjct: 424 SGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREF 483
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGA 336
FD R+++ W AM+ Y+Q ++ + ++ M + + PD V L GCA +GA
Sbjct: 484 FDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGA 543
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G I G+ + + +D V A+I MY+KCG I +A +IF L KD SW ++I G
Sbjct: 544 NKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITG 603
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
+ +G +A+E+F M+ GAKPD I+++ VLS+CSH GLV EG+ +F+ + + + P
Sbjct: 604 YSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSP 663
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
LEH+ C++DLL RAG L EA+ LI ++P + ++GALLSAC+ +GN ++ E A
Sbjct: 664 GLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPT---AEVWGALLSACKTHGNNELAELAA 720
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
L ++S DS + LLA IYA A + D VR+ M++ G++K PG S +E+ +H F
Sbjct: 721 KHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVF 780
Query: 577 LVGDPSHSEMKEIYSMLDRM 596
D SH ++ I LD +
Sbjct: 781 KAEDVSHPQVIAIREKLDEL 800
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 199/390 (51%), Gaps = 18/390 (4%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N +M+ Y LG + + ++LF MP +DV SWN +SG+ + RF DA++ F MR+ +
Sbjct: 99 NIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDS 158
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARE 245
+P+ T + +C AL E+ ++ + + + P + ++DM+ +CG + A +
Sbjct: 159 LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASK 218
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
F ++ V C SM++GY ++ A +LF+ P RD+V W M++ Q R EA
Sbjct: 219 QFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREA 278
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+++ +M ++ D + LT CA+L +L GK +H + + +D VA+A++E+
Sbjct: 279 LSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVEL 338
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
YAKCG ++A +F LR+++ SWT +I G G +++LELF+QM + D
Sbjct: 339 YAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFAL 398
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY------GCLIDLLGRAGLLDEAEE 479
++S CS+ R +++ + K H LI + + G L AE
Sbjct: 399 ATIISGCSN-------RMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAES 451
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+ + E +I+ + +L+A GN+
Sbjct: 452 IFSSM--EERDIVS--WTGMLTAYSQVGNI 477
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 217/476 (45%), Gaps = 71/476 (14%)
Query: 20 PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL 79
P + ++ + G+L AE++FG + + ++N L+ + + G F ++ F +
Sbjct: 93 PNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSM 152
Query: 80 RERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
R G S P+ FT+ K+ G LG + ++ G + K G + D V I+DM+ G
Sbjct: 153 RRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGA 212
Query: 139 ICNVKK-------------------------------LFDEMPDKDVVSWNVSISGHVKC 167
+ K LF+ MP++DVVSWN+ +S +
Sbjct: 213 VDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQS 272
Query: 168 MRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE-FTPI 225
R +A+ V M +G L D T S+L+AC L +L GK++H + + L P
Sbjct: 273 GRAREALSVAVDMHNRGVRL--DSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPY 330
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ +A++++Y KCGC EAR +F + ++N + WT ++ G
Sbjct: 331 VASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGG--------------------- 369
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
++Q+ F E++ LF +M+ + D+F L +++GC+ + + +H
Sbjct: 370 ----------FLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHS 419
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
++ T V++ +LI MYAKCG ++ A IF + E+D SWT ++ + G I K
Sbjct: 420 LSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGK 479
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A E F M + + IT+ +L A G ++G + ++ M + P Y
Sbjct: 480 AREFFDGM----STRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTY 531
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 38/322 (11%)
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELF-DEMPNKNVICWTSMVSGYVNCGQLE 272
R ++ L + N LL Y CG L +AR L ++ NVI M++GY G L
Sbjct: 53 RLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLS 112
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK-PDKFILVALLTGC 331
A +LF R P RD+ W +++GY Q RF +A+ F M+ P+ F + C
Sbjct: 113 DAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSC 172
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL-------------------- 371
LG E + G + + D VAT +++M+ +CG
Sbjct: 173 GALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRN 232
Query: 372 -----------IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
++ ALE+F + E+D SW ++ L+ +G+ +AL + M + G +
Sbjct: 233 SMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRL 292
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAE 478
D T+ L+AC+ + G++ +V + P ++ Y +++L + G EA
Sbjct: 293 DSTTYTSSLTACAKLSSLGWGKQLH---AQVIRSLPCIDPYVASAMVELYAKCGCFKEAR 349
Query: 479 ELIRKIPNENNEIIVPLYGALL 500
+ + + N L G L
Sbjct: 350 RVFSSLRDRNTVSWTVLIGGFL 371
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 248/365 (67%), Gaps = 3/365 (0%)
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+L+ +YC C +++AR +F EM ++V+ W M++GYV G L AR+LFD P R++V
Sbjct: 119 SLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYVKAGDLAHARELFDAMPERNVVS 178
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
WT +I GY Q R +EAV +FR MQ+ ++PD L+++L+ C LGA++ G+W+H ++
Sbjct: 179 WTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVV 238
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + + ++I+MY KCG IEKA+E+F + EK +WT++I G A++G +A+E
Sbjct: 239 RRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVE 298
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
+F +M P+D+TF+ +LSACSH GL D GR +FN M Y+I+P++EHYGC++DLL
Sbjct: 299 MFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLL 358
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG L EA++L++ +P + N I +GALL+A R +G+ D+GE+ L ++E +S
Sbjct: 359 GRAGCLKEAQDLVKDMPLKANAAI---WGALLAASRTHGDADLGEEALVHLIELEPSNSG 415
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+ LL+NI+A RW+DV+ +R+ MKE G+R VPG SSIE++G++HEF D SH + +
Sbjct: 416 NYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASSIEVDGMVHEFTSRDGSHPFLHK 475
Query: 589 IYSML 593
I +L
Sbjct: 476 ICEVL 480
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 155/300 (51%), Gaps = 43/300 (14%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D N ++ Y G + + ++LFD MP+++VVSW I G+ + R E+AV+VFRRM
Sbjct: 144 DVVAWNVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRM- 202
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-----NQELEFTPIMGNALLDMYCK 236
Q + PD ++S LSAC L ++LG+ +HR++ QE+ P+M N+++DMY K
Sbjct: 203 QVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEI---PLM-NSIIDMYMK 258
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CGC+ +A E+F+ M K+V+ WT++++G+ G G
Sbjct: 259 CGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGL------------------------GL 294
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG-YINENRITVD 355
+AV +FR M+ + P+ +A+L+ C+ +G + G+W +++ RI
Sbjct: 295 -------QAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQ 347
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMI 414
++++ + G +++A ++ ++ K +AA W +++ +G + E +I
Sbjct: 348 VEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLI 407
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 148/288 (51%), Gaps = 15/288 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L +A ++F ++ ++++ +I +A+ +++ +F +++ G+ PD V
Sbjct: 159 GDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVL 218
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A G LG V GE VH +VV+ GL + + NSI+DMY G I ++F+ M +K VV
Sbjct: 219 SACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVV 278
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I+G AV++FRRM + N+ P++ T ++ LSAC+ + +LG+
Sbjct: 279 TWTTLIAGFALHGLGLQAVEMFRRMERE-NMAPNDVTFLAILSACSHVGLTDLGRWYFNI 337
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ + P + + ++D+ + GCL EA++L +MP K N W ++++ G
Sbjct: 338 MVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDA- 396
Query: 273 KARDLFDRSPVRDIVL-------WTAMINGYVQFNRFDEAVALFREMQ 313
DL + + V I L + + N + + R+D+ L + M+
Sbjct: 397 ---DLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMK 441
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 290/492 (58%), Gaps = 5/492 (1%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+K+H +VK+GL + N+++D YG + + LFDEMP +D VSW ++ + +
Sbjct: 21 AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
+ +F M L PD + L AC +L +L LGK++H R++ +
Sbjct: 81 AKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDV 140
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ ++L+DMY KCG S AR +FD + K + WT+M+SGY G ++A +LF R+PVR+
Sbjct: 141 VKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRN 200
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLK-PDKFILVALLTGCAQLGALEQGKWIH 344
+ WTA+I+G VQ + +F EM+ + D +L +++ CA L L GK IH
Sbjct: 201 LYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIH 260
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
G + + ++ AL++MYAKC I A +F + +D SWTSII G A +G+
Sbjct: 261 GLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAK 320
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+AL+L+ QM+ KP+++TF+G++ ACSH GLV +GR+ F M E Y+I P L+ + C
Sbjct: 321 EALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCF 380
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLL R+G L+EAE+LI+ +P++ +E P + ALLSAC+ +GN +MG ++A L +
Sbjct: 381 LDLLSRSGHLNEAEDLIKTMPHKPDE---PTWAALLSACKHHGNTEMGVRIADRLLSLNM 437
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+ S + LL+N+YA A +WE ++ VR+ M +M V++ PG SSI++ F G+ H
Sbjct: 438 HEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHP 497
Query: 585 EMKEIYSMLDRM 596
EI+ +L +
Sbjct: 498 MKDEIFGLLKEL 509
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 228/532 (42%), Gaps = 110/532 (20%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHG--NLLY-AEKIFGSIQSPCLLAYNLLIK 61
K+I AQI + GL Q N L+ ++G NLL A +F + +++ ++
Sbjct: 22 KKIHAQIVKSGLNQCQPLPNTLL-----DAYGKCNLLQDAHYLFDEMPQRDHVSWASILT 76
Query: 62 AFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A+ + K+L +F + + PD+F Y + KA L ++ G++VH V +
Sbjct: 77 AYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFV 136
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D V +S++DMY G + +FD + K VSW +SG+ + ++A+++F R
Sbjct: 137 DDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRT 196
Query: 181 --------------------------------RQGCNLMPDEGTVVSTLSACTALKNLEL 208
R+G +++ D + S + AC L L L
Sbjct: 197 PVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIV-DPLVLSSVVGACANLAVLGL 255
Query: 209 GKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
GK+IH I E + NAL+DMY KC + AR +F+ M +++V+ WTS++ G
Sbjct: 256 GKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQ 315
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G+ ++A DL+D +M + +KP++ V L
Sbjct: 316 HGRAKEALDLYD-------------------------------QMVLAEIKPNEVTFVGL 344
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
+ C+ G + +G+ + A+IE Y I +L++F
Sbjct: 345 IYACSHAGLVSKGRKLF---------------KAMIEDYR----ISPSLQLF-------- 377
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
T + L+ +G +N+A +L M KPD+ T+ +LSAC H G + G R +
Sbjct: 378 ---TCFLDLLSRSGHLNEAEDLIKTM---PHKPDEPTWAALLSACKHHGNTEMGVRIADR 431
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
+ + +P Y L ++ AG ++ +RK+ + P Y ++
Sbjct: 432 LLSLNMHEPST--YVLLSNVYAGAGKWEQMSR-VRKLMTDMEVKRKPGYSSI 480
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C + A K IH I ++ + + L++ Y KC L++ A +F E+ ++D SW
Sbjct: 12 CTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSW 71
Query: 391 TSIICGLAMNGKINKALELFSQMISGGA-KPDDITFIGVLSACS 433
SI+ NK L +F M + +PD + +L AC+
Sbjct: 72 ASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACA 115
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 312/537 (58%), Gaps = 15/537 (2%)
Query: 45 FGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEV 104
FG ++ P L +N +IK+ + R++LLL + E GVS D F+ V KA LG V
Sbjct: 73 FGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 130
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K G ++HG++ KTGL D ++ N ++ +Y G + +++FD MP +D VS+N I G+
Sbjct: 131 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 190
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EF 222
VKC A ++F +LMP E ++S S + G +I + ++ E
Sbjct: 191 VKCGLIVSARELF-------DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 243
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
I N+++D Y K G + +A+ LFD MP ++V+ W +M+ GY G + A+ LFD+ P
Sbjct: 244 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 303
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGK 341
RD+V + +M+ GYVQ EA+ +F +M+ L PD LV +L AQLG L +
Sbjct: 304 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 363
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H YI E + + + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G
Sbjct: 364 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 423
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A ++ Q+ KPDDITF+GVL+ACSH GLV EG F M ++I+P+L+HY
Sbjct: 424 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 483
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++D+L R+G ++ A+ LI ++P E N++I + L+AC + + GE +A L
Sbjct: 484 GCMVDILSRSGSIELAKNLIEEMPVEPNDVI---WRTFLTACSHHKEFETGELVAKHLIL 540
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ S + LL+N+YAS W+DV VR MKE + K+PGCS IE++G +HEF V
Sbjct: 541 QAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 597
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFV 94
G + +A+ +F + ++AYN ++ + + ++L +FS + +E + PD+ T V
Sbjct: 290 GFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 349
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A+ LG + K +H Y+V+ + +++DMY G I + +F+ + +K +
Sbjct: 350 LPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 409
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
WN I G E A D+ ++ + +L PD+ T V L+AC+ ++ G
Sbjct: 410 DHWNAMIGGLAIHGLGESAFDMLLQIER-LSLKPDDITFVGVLNACSHSGLVKEGLLCFE 468
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+ ++ + P + + ++D+ + G + A+ L +EMP N + W + ++ + +
Sbjct: 469 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEF 528
Query: 272 E 272
E
Sbjct: 529 E 529
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
F V D LW A+I + +A+ L M + DKF L +L C++LG +
Sbjct: 71 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 130
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
+ G IHG++ + + D + LI +Y KCG + + ++F + ++D+ S+ S+I G
Sbjct: 131 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 190
Query: 398 AMNGKINKALELF-------------SQMISGGAKPDD-----------------ITFIG 427
G I A ELF + MISG A+ D I++
Sbjct: 191 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNS 250
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
++ G +++ + F+ M + + + +ID + G + A+ L ++P+
Sbjct: 251 MIDGYVKHGRIEDAKGLFDVMP-----RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 305
Query: 488 N 488
+
Sbjct: 306 D 306
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 195/556 (35%), Positives = 310/556 (55%), Gaps = 19/556 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + ++++N ++ +A+ G ++ +F+K+ R ++ ++ + A
Sbjct: 127 AHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVH 182
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G +K+ ++ + ++ E ++ C +M Y + + ++LFD MP +DV+SWN
Sbjct: 183 NGRLKEARRL--FESQSNWELISWNC--LMGGYVKRNMLGDARQLFDRMPVRDVISWNTM 238
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
ISG+ + A +F N P T ++N + E +Y ++
Sbjct: 239 ISGYAQVGDLSQAKRLF-------NESPIRDVFTWTAMVSGYVQN-GMVDEARKYFDEMP 290
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
I NA+L Y + + A ELF+ MP +N+ W +M++GY G + +AR LFD
Sbjct: 291 VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDM 350
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P RD V W A+I+GY Q ++EA+ +F EM+ ++ L+ CA + ALE G
Sbjct: 351 MPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELG 410
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K +HG + + V AL+ MY KCG ++A ++F + EKD SW ++I G A +
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARH 470
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G +AL LF M G KPD+IT +GVLSACSH GL+D G +F +M Y ++P +H
Sbjct: 471 GFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKH 530
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C+IDLLGRAG L+EAE L+R +P + +GALL A RI+GN ++GEK A ++
Sbjct: 531 YTCMIDLLGRAGRLEEAENLMRNMPFDPG---AASWGALLGASRIHGNTELGEKAAEMVF 587
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
K+E ++S + LL+N+YA++ RW DV +R KM+E GV+KV G S +E+ IH F VGD
Sbjct: 588 KMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGD 647
Query: 581 PSHSEMKEIYSMLDRM 596
H E IY+ L+ +
Sbjct: 648 CFHPEKDRIYAFLEEL 663
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 248/574 (43%), Gaps = 99/574 (17%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
++P+ + +H +G+ A ++F S+ ++YN +I + + F + LF
Sbjct: 42 KDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFD 101
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
K+ ER D F++ V+ TG YV N
Sbjct: 102 KMPER----DLFSWN---------------------VMLTG-----YVRNR--------- 122
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
++ KLFD MP KDVVSWN +SG+ + ++A +VF N MP ++
Sbjct: 123 RLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVF-------NKMPHRNSISWNG 175
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
+ N L KE R + + I N L+ Y K L +AR+LFD MP ++VI
Sbjct: 176 LLAAYVHNGRL-KEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVIS 234
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W +M+SGY G L +A+ LF+ SP+RD+ WTAM++GYVQ DEA F EM +
Sbjct: 235 WNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPV--- 291
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
++ A+L G Q + I G + E + +I Y + G I +A +
Sbjct: 292 -KNEISYNAMLAGYVQYKKMV----IAGELFEAMPCRNISSWNTMITGYGQNGGIAQARK 346
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F + ++D SW +II G A NG +AL +F +M G + TF LS C+
Sbjct: 347 LFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAA 406
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLID--LLG---RAGLLDEAEELIRKIPNEN---- 488
++ G++ Q+ GC + LLG + G DEA ++ I ++
Sbjct: 407 LELGKQVHG------QVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSW 460
Query: 489 NEIIVPL----YG-----------------------ALLSACRIYGNVDMG-EKLAALLE 520
N +I +G +LSAC G +D G E ++
Sbjct: 461 NTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDR 520
Query: 521 KIESKDSSFH-TLLANIYASANRWEDVTNVRQKM 553
K +S H T + ++ A R E+ N+ + M
Sbjct: 521 DYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNM 554
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 175/407 (42%), Gaps = 63/407 (15%)
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
D D+V+WN +IS H++ + A+ VF N MP +V
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVF-------NSMPRRSSVSY--------------- 80
Query: 211 EIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
NA++ Y + S AR+LFD+MP +++ W M++GYV +
Sbjct: 81 -----------------NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRR 123
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
L +A LFD P +D+V W AM++GY Q DEA +F +M + LL
Sbjct: 124 LGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP----HRNSISWNGLLAA 179
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
G L++ + + E++ + + L+ Y K ++ A ++F + +D SW
Sbjct: 180 YVHNGRLKEARRLF----ESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISW 235
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I G A G +++A LF++ D T+ ++S G+VDE R++F+ M
Sbjct: 236 NTMISGYAQVGDLSQAKRLFNE----SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPV 291
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
+I Y ++ + + A EL +P N + + +++ G +
Sbjct: 292 KNEIS-----YNAMLAGYVQYKKMVIAGELFEAMPCRN----ISSWNTMITGYGQNGGIA 342
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
K L + + +D + + YA +E+ N+ +MK G
Sbjct: 343 QARK---LFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDG 386
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 146/302 (48%), Gaps = 9/302 (2%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I ++F+ +N + N ++ + +G + A K+F + +++ +I +A+
Sbjct: 312 IAGELFEAMPCRNISSWNTMIT--GYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQN 369
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G + ++L +F +++ G S + T+ + ++ G++VHG VVK G E +V
Sbjct: 370 GHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVG 429
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++ MY G +F+ + +KDVVSWN I+G+ + A+ +F M++ +
Sbjct: 430 NALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKA-GV 488
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEAR 244
PDE T+V LSAC+ ++ G E ++++ P + ++D+ + G L EA
Sbjct: 489 KPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAE 548
Query: 245 ELFDEMP-NKNVICWTSMVSG---YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
L MP + W +++ + N EKA ++ + ++ ++ + N Y
Sbjct: 549 NLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 608
Query: 301 RF 302
R+
Sbjct: 609 RW 610
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 204/574 (35%), Positives = 324/574 (56%), Gaps = 37/574 (6%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
++++ I F + G ++L LF +L E GV P++ T+ V +A G LG+ G + G
Sbjct: 149 VVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILG 208
Query: 113 YVVKTGLEFDTYVCNS-------------------------------IMDMYGVLGKICN 141
VVK G E V NS I+D Y G +
Sbjct: 209 LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLRE 268
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
+++FDEMP+++ +SW+ I+ + + E+A+ +F +M Q P+ TLSA
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFKPNISCFACTLSALA 327
Query: 202 ALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
+L+ L G IH ++ + ++ +G++L+D+YCKCG + R +FD + KNV+CW S
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
MV GY G+LE+ +LF+ P ++ V W +I GY++ + ++ + +F + + P+
Sbjct: 388 MVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
K ++L CA + +L++G +HG I + I D V TAL +MYAKCG I + ++F
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVD 439
+ EK+ SWT +I GLA +G ++L LF +M + P+++ + VL ACSH GLVD
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVD 567
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
+G +FN+M +VY I+PK +HY C++DLL R+G L EAEE IR IP + + AL
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE---ANAWAAL 624
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
LS C+ Y + + E+ A L ++ +S+ + LL+NIYASA RW DV+N+R+ M+E G++
Sbjct: 625 LSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLK 684
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
K GCS +E+ +H F D SHS+ EIY L
Sbjct: 685 KSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTL 718
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 224/495 (45%), Gaps = 68/495 (13%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
L+K F+ +G + +L + L + G S + K + +K ++ +VK
Sbjct: 27 LLKKFSNQGLITQGNVLHAHLIKTGFSSQRY---IAIKLLILYLNCRKFAEI-DQIVKEF 82
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
D V N ++ Y G + + LFDEMP+++ VSW+ ISG +K R E+++ F
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 179 R----------------MRQGCN--------------LMPDEGTVVSTLSACTALKNLEL 208
R +R G N + P++ T S + AC L + L
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 209 GKEI-HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G I + E + N+L+ + + G + AR +FD M ++V+ WT+++ YV
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G L +AR +FD P R+ + W+AMI Y Q +EA+ LF +M KP+
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+ A L AL G IHG++ + I D + ++LI++Y KCG + +F + EK+
Sbjct: 323 LSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNV 382
Query: 388 ASWTSIICGLAMNGKI-------------------------------NKALELFSQMISG 416
W S++ G ++NG++ K LE+F+ ++
Sbjct: 383 VCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVS 442
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G P+ TF VL AC+ +D+G + ++ IQ + L D+ + G +
Sbjct: 443 GQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKL-GIQYDIFVGTALTDMYAKCGDIGS 501
Query: 477 AEELIRKIPNENNEI 491
++++ ++P E NEI
Sbjct: 502 SKQVFERMP-EKNEI 515
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 183/399 (45%), Gaps = 73/399 (18%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A +IF + ++++ +I +++ G ++L LFSK+ + G P+ +
Sbjct: 264 GDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTL 323
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD-------- 147
A+ L + G +HG+V K G++ D ++ +S++D+Y GK + + +FD
Sbjct: 324 SALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVV 383
Query: 148 -----------------------EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+P+K+ VSW I+G+++ + E ++VF +
Sbjct: 384 CWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSG 443
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
P++ T S L AC ++ +L+ G +H + I +++ +G AL DMY KCG + +
Sbjct: 444 Q-TPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSS 502
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+++F+ MP KN I WT M+ G G
Sbjct: 503 KQVFERMPEKNEISWTVMIQGLAESGFAV------------------------------- 531
Query: 304 EAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR----ITVDAVV 358
E++ LF EM+ + P++ +L+++L C+ G +++G W Y N I
Sbjct: 532 ESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLW---YFNSMEKVYGIKPKGKH 588
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICG 396
T ++++ ++ G + +A E + + +A +W +++ G
Sbjct: 589 YTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 315/579 (54%), Gaps = 34/579 (5%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGV---------------- 84
A +F + L ++NL++ +A+ R + +LF + E+ V
Sbjct: 83 ARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHV 142
Query: 85 --SPDNFTYPFVFKAVGWLG----EVKKGEKVHGY-VVKTGLEFDTYVCNSIMDMYGVLG 137
+ D F ++ W G V+ G + ++ +++ CN +M Y
Sbjct: 143 DEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRN 202
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
+ + ++LFD++P +D++SWN ISG+ + A +F + + D T + +
Sbjct: 203 MLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE-----SPVRDVFTWTAMV 257
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
A L+ + + + Q+ E + N ++ Y + + RELF+EMP N+
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQKREMSY---NVMIAGYAQYKRMDMGRELFEEMPFPNIGS 314
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W M+SGY G L +AR+LFD P RD V W A+I GY Q ++EA+ + EM+
Sbjct: 315 WNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGE 374
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
++ L+ CA + ALE GK +HG + +V AL+ MY KCG I++A +
Sbjct: 375 SLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYD 434
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F ++ KD SW +++ G A +G +AL +F MI+ G KPD+IT +GVLSACSH GL
Sbjct: 435 VFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGL 494
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
D G +F++M + Y I P +HY C+IDLLGRAG L+EA+ LIR +P E + +G
Sbjct: 495 TDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPD---AATWG 551
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
ALL A RI+GN+++GE+ A ++ K+E +S + LL+N+YA++ RW DV+ +R KM+++G
Sbjct: 552 ALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIG 611
Query: 558 VRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
V+K PG S +E+ IH F VGD H E IY+ L+ +
Sbjct: 612 VQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEEL 650
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 225/500 (45%), Gaps = 78/500 (15%)
Query: 4 LKQIQAQIFQIGLQQN--------PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA 55
L+Q+ + IF + N P T+ TH +G+ A +F ++ ++
Sbjct: 7 LRQLHSSIFHVQRPTNYPKPHFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVS 66
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
YN +I + + F + LF K+ +
Sbjct: 67 YNAMISGYLRNAKFSLARDLFDKMPHK--------------------------------- 93
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
D + N ++ Y ++ + + LFD MP+KDVVSWN +SG+V+ ++A D
Sbjct: 94 ------DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARD 147
Query: 176 VFRRMRQGCNLMPDEGTVV--STLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDM 233
VF R MP + ++ L+A LE E R + ++ I N L+
Sbjct: 148 VFDR-------MPHKNSISWNGLLAAYVRSGRLE---EARRLFESKSDWELISCNCLMGG 197
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y K L +AR+LFD++P +++I W +M+SGY G L +AR LF+ SPVRD+ WTAM+
Sbjct: 198 YVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMV 257
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
YVQ DEA +F EM R + ++ G AQ ++ G+ + E
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQKR----EMSYNVMIAGYAQYKRMDMGRELF----EEMPF 309
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ +I Y + G + +A +F + ++D+ SW +II G A NG +A+ + +M
Sbjct: 310 PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEM 369
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID--LLG-- 469
G + TF LSAC+ ++ G++ Q+ GCL+ L+G
Sbjct: 370 KRDGESLNRSTFCCALSACADIAALELGKQVHG------QVVRTGYEKGCLVGNALVGMY 423
Query: 470 -RAGLLDEAEELIRKIPNEN 488
+ G +DEA ++ + + +++
Sbjct: 424 CKCGCIDEAYDVFQGVQHKD 443
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 159/330 (48%), Gaps = 24/330 (7%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NA++ Y + S AR+LFD+MP+K++ W M++GY +L AR LFD P +D+V
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W AM++GYV+ DEA +F M + LL + G LE+ + +
Sbjct: 128 SWNAMLSGYVRSGHVDEARDVFDRMP----HKNSISWNGLLAAYVRSGRLEEAR----RL 179
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
E++ + + L+ Y K ++ A ++F ++ +D SW ++I G A +G +++A
Sbjct: 180 FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQAR 239
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LF + D T+ ++ A G++DE RR F+ M + ++ Y +I
Sbjct: 240 RLFEE----SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMS-----YNVMIAG 290
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
+ +D EL ++P N + + ++S G++ L ++ + +S
Sbjct: 291 YAQYKRMDMGRELFEEMPFPN----IGSWNIMISGYCQNGDLAQARNLFDMMPQRDS--V 344
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMG 557
S+ ++A YA +E+ N+ +MK G
Sbjct: 345 SWAAIIAG-YAQNGLYEEAMNMLVEMKRDG 373
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A +F + +++ +I +A+ G + +++ + +++ G S + T+
Sbjct: 326 GDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCAL 385
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A + ++ G++VHG VV+TG E V N+++ MY G I +F + KD+V
Sbjct: 386 SACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIV 445
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN ++G+ + A+ VF M + PDE T+V LSAC+ + G E
Sbjct: 446 SWNTMLAGYARHGFGRQALTVFESMITA-GVKPDEITMVGVLSACSHTGLTDRGTEYFHS 504
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE 272
+N++ TP + ++D+ + GCL EA+ L MP + W +++ G +E
Sbjct: 505 MNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNME 564
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 48/286 (16%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
T +S ++ G + A +FD P+R+ V + AMI+GY++ +F A LF +M
Sbjct: 37 TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMP----H 92
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
D F +LTG A+ L + + + E D V A++ Y + G +++A ++
Sbjct: 93 KDLFSWNLMLTGYARNRRLRDARMLFDSMPEK----DVVSWNAMLSGYVRSGHVDEARDV 148
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFS-----QMIS--------------GGAK 419
F + K++ SW ++ +G++ +A LF ++IS G A+
Sbjct: 149 FDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDAR 208
Query: 420 P--------DDITFIGVLSACSHGGLVDEGRRFF--NTMTEVYQIQPKLEHYGCLIDLLG 469
D I++ ++S + G + + RR F + + +V+ + ++
Sbjct: 209 QLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFT-------WTAMVYAYV 261
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
+ G+LDEA + ++P + Y +++ Y +DMG +L
Sbjct: 262 QDGMLDEARRVFDEMPQKREMS----YNVMIAGYAQYKRMDMGREL 303
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V T I + + G + AL +F + +++ S+ ++I G N K + A +LF +M
Sbjct: 33 TVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM-- 90
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
D ++ +L+ + + + R F++M E + + ++ R+G +D
Sbjct: 91 --PHKDLFSWNLMLTGYARNRRLRDARMLFDSMPE-----KDVVSWNAMLSGYVRSGHVD 143
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRI 505
EA ++ ++P++N+ L A + + R+
Sbjct: 144 EARDVFDRMPHKNSISWNGLLAAYVRSGRL 173
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 292/505 (57%), Gaps = 39/505 (7%)
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD 153
+ +A G+V G VHG VK + + T CN+++DMY G + +FD M +
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
VV+W I+ + + ++A+ +F M R+G + PD T+ + L AC +LE GK++
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREG--VSPDIFTITTVLHACACNGSLENGKDV 121
Query: 213 HRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H YI + +++ + NAL+DMY KC G +
Sbjct: 122 HNYIRENDMQSNIFVCNALMDMYAKC-------------------------------GSM 150
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
E A +F PV+DI+ W MI GY + + +EA++LF +M ++ +KPD L +L C
Sbjct: 151 EDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPAC 209
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
A L +L++GK +HG+I N D VA AL++MY KCG+ A +F + KD +WT
Sbjct: 210 ASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWT 269
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+I G M+G N A+ F++M G +PD+++FI +L ACSH GL+DEG RFFN M +
Sbjct: 270 VMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDE 329
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
++PKLEHY C++DLL R+G L A + I+ +P E + I +GALLS CRI+ +V +
Sbjct: 330 CNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATI---WGALLSGCRIHHDVKL 386
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
EK+A + ++E +++ ++ LLAN YA A +WE+V +RQK+ G++K PGCS IE+
Sbjct: 387 AEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKS 446
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRM 596
+H FL G+ SH + K+I +L R+
Sbjct: 447 KVHIFLAGNSSHPQAKKIEVLLKRL 471
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 184/367 (50%), Gaps = 38/367 (10%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F + ++ + LI A+A++G +++ LF ++ GVSPD FT V A G
Sbjct: 55 VFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGS 114
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
++ G+ VH Y+ + ++ + +VCN++MDMY G + + +F EMP KD++SWN I G
Sbjct: 115 LENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGG 174
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT 223
+ K +A+ +F M + PD T+ L AC +L +L+ GKE+H +I + F+
Sbjct: 175 YSKNSLPNEALSLFGDMVL--EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFS 232
Query: 224 -PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+DMY KCG AR LFD +P K++I WT M++GY
Sbjct: 233 DQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGY----------------- 275
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
G F + A+ F EM+ ++PD+ +++L C+ G L++G W
Sbjct: 276 ------------GMHGFG--NNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEG-W 320
Query: 343 IHGYINENRITVDAVVA--TALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAM 399
+ ++ V + ++++ A+ G + A + + E DA W +++ G +
Sbjct: 321 RFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRI 380
Query: 400 NGKINKA 406
+ + A
Sbjct: 381 HHDVKLA 387
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+V++L CA G + G+ +HG + + L++MYAKCG+++ A+ +F +
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ +WTS+I A G ++A+ LF +M G PD T VL AC+ G ++ G+
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
N + E +Q + L+D+ + G +++A + ++P
Sbjct: 121 VHNYIRE-NDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP 161
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 318/559 (56%), Gaps = 38/559 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR--ERGVSPDNFTYPFVFKAV 98
A+ +F ++++N +I +A++ ++ L K++ + + D FT V
Sbjct: 258 AQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Query: 99 GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
E++ +++HGY + GL+ + V N+ + Y G +C+ +++FD M K V SWN
Sbjct: 318 LERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWN 377
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-IN 217
+ G+ + A+D++ +M L PD T+ S L AC+ +K+L G+EIH + +
Sbjct: 378 ALLCGYAQNSDPRKALDLYLQMTDS-GLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALR 436
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
L P +G +LL +Y IC CG+ A+ L
Sbjct: 437 NGLAVDPFIGISLLSLY---------------------IC----------CGKPFAAQVL 465
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FD R +V W MI GY Q DEA+ LFR+M ++P + ++ + C+QL AL
Sbjct: 466 FDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSAL 525
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
GK +H + + +T D V++++I+MYAK G I + IF LREKD ASW II G
Sbjct: 526 RLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGY 585
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
++G+ +ALELF +M+ G KPDD TF G+L ACSH GLV++G +FN M ++ I+PK
Sbjct: 586 GIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPK 645
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
LEHY C++D+LGRAG +D+A LI ++P + + I + +LLS+CRI+GN+ +GEK+A
Sbjct: 646 LEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRI---WSSLLSSCRIHGNLGLGEKVAN 702
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
L ++E + + L++N++A + +W+DV VR +MK++G++K GCS IE+ G +H FL
Sbjct: 703 KLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFL 762
Query: 578 VGDPSHSEMKEIYSMLDRM 596
+GD E++E+ R+
Sbjct: 763 IGDEMLPELEEVRETWRRL 781
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 203/413 (49%), Gaps = 49/413 (11%)
Query: 30 CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRE-RGVSPDN 88
C PS + +F ++ L +N ++ A+ + F ++ +FS+L PDN
Sbjct: 47 CGSPSDSRM-----VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDN 101
Query: 89 FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
FT P V KA L ++ G+ +HG K L D +V N+++ MYG G + K+F+
Sbjct: 102 FTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEH 161
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC-NLMPDEGTVVSTLSACTALKNLE 207
MP++++VSWN I G + +++ + FR M G + +PD T+V+ L C +++E
Sbjct: 162 MPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIE 221
Query: 208 LGKEIHRY-----INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
G +H +N+EL ++ N+L+DMY KC LSE
Sbjct: 222 KGMAVHGLAVKLGLNEEL----MVNNSLIDMYSKCRFLSE-------------------- 257
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI--IRLKPD 320
A+ LFD++ ++IV W +MI GY + L ++MQ ++K D
Sbjct: 258 -----------AQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKAD 306
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+F ++ +L C + L+ K +HGY + + + +VA A I Y +CG + + +F
Sbjct: 307 EFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFD 366
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+ K +SW +++CG A N KAL+L+ QM G PD T +L ACS
Sbjct: 367 LMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 419
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 225/461 (48%), Gaps = 52/461 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LK++ ++ GLQ N N + + G L +E++F + + + ++N L+
Sbjct: 323 LQSLKELHGYSWRHGLQSNELVANAFIA--AYTRCGALCSSERVFDLMDTKTVSSWNALL 380
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ RK+L L+ ++ + G+ PD FT + A + + GE++HG+ ++ GL
Sbjct: 381 CGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLA 440
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D ++ S++ +Y GK + LFD M + +VSWNV I+G+ + ++A+++FR+M
Sbjct: 441 VDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQM 500
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
+ P E ++ AC+ L L LGKE+H + + L + ++++DMY K GC
Sbjct: 501 LSD-GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 559
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ ++ +FD + K+V W +++GY I+G
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGY--------------------------GIHG---- 589
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
R EA+ LF +M + LKPD F +L C+ G +E G ++ + +N + I
Sbjct: 590 -RGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEH 648
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI-------NKALELF 410
T +++M + G I+ AL + E+ + D+ W+S++ ++G + NK LEL
Sbjct: 649 YTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELE 708
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+ KP++ I L A S G D+ RR M ++
Sbjct: 709 PE------KPENYVLISNLFAGS--GKWDDVRRVRGRMKDI 741
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 168/345 (48%), Gaps = 37/345 (10%)
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS-IMDMYGVLGKICNVKKLFDEMPDK 152
+ +A G +++ G ++H V + + +V N+ I+ MY + G + + +FD++ K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
++ WN +S + + FEDA+ +F + PD T+ + AC L +L LG+ I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 213 HRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H + +L +GNAL+ MY KCG + EA ++F+ MP +N++ W S++ G+
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE---- 179
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR--LKPDKFILVALLT 329
NG++Q E+ FREM + PD LV +L
Sbjct: 180 ----------------------NGFLQ-----ESFNAFREMLVGEESFVPDVATLVTVLP 212
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
CA +E+G +HG + + + +V +LI+MY+KC + +A +F + +K+ S
Sbjct: 213 VCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVS 272
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGA--KPDDITFIGVLSAC 432
W S+I G A + + L +M + A K D+ T + VL C
Sbjct: 273 WNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 158/339 (46%), Gaps = 50/339 (14%)
Query: 197 LSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
L AC K++E+G+ +H ++ +F + +
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFC-----------------------------NDFV 35
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QII 315
T +++ Y CG +R +FD+ +++ W A+++ Y + F++A+++F E+ +
Sbjct: 36 LNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVT 95
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
KPD F L ++ CA L L G+ IHG + + D V ALI MY KCGL+E+A
Sbjct: 96 EHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA 155
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK--PDDITFIGVLSACS 433
+++F + E++ SW SIICG + NG + ++ F +M+ G PD T + VL C+
Sbjct: 156 VKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCA 215
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII- 492
+++G ++ + +L LID+ + L EA+ L K N+ I+
Sbjct: 216 GEEDIEKGMAVHGLAVKL-GLNEELMVNNSLIDMYSKCRFLSEAQLLFDK--NDKKNIVS 272
Query: 493 ----VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
+ Y CR + LL+K++++D+
Sbjct: 273 WNSMIGGYAREEDVCRTF----------YLLQKMQTEDA 301
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%), Gaps = 38/358 (10%)
Query: 5 KQIQAQIFQIGLQQNPE---TLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
++I + GL +P +L L + C P A+ +F ++ L+++N++I
Sbjct: 428 EEIHGFALRNGLAVDPFIGISLLSLYICCGKP-----FAAQVLFDGMEHRSLVSWNVMIA 482
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ G +++ LF ++ G+ P V A L ++ G+++H + +K L
Sbjct: 483 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 542
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D +V +SI+DMY G I +++FD + +KDV SWNV I+G+ R ++A+++F +M
Sbjct: 543 DIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKML 602
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG-----NALLDMYCK 236
+ L PD+ T L AC+ +E G E Y NQ L I ++DM +
Sbjct: 603 R-LGLKPDDFTFTGILMACSHAGLVEDGLE---YFNQMLNLHNIEPKLEHYTCVVDMLGR 658
Query: 237 CGCLSEARELFDEMP-NKNVICWTSMVSG---YVNCGQLEK-ARDLFDRSPVR--DIVLW 289
G + +A L +EMP + + W+S++S + N G EK A L + P + + VL
Sbjct: 659 AGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLI 718
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
+ + G ++D+ + M+ I L+ D GC+ +E G +H ++
Sbjct: 719 SNLFAGS---GKWDDVRRVRGRMKDIGLQKD--------AGCSW---IEVGGKVHNFL 762
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 327 LLTGCAQLGALEQGKWIHGYIN-ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
LL C Q +E G+ +H ++ + D V+ T +I MY+ CG + +F +LR K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEG-RR 443
+ W +I+ N A+ +FS++IS KPD+ T V+ AC+ GL+D G +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLGQ 121
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ M + + LI + G+ GL++EA ++ +P N
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERN 166
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 290/482 (60%), Gaps = 5/482 (1%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
H V+TG D +V ++ Y G + + +K+FD M +DVVSW V + + +
Sbjct: 172 THALAVRTGALDDGFVGTALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRN 231
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGN 228
+++A+ +F +M+ ++PD+ + + L AC +++L +GK IH Y + ++ + +
Sbjct: 232 YKEALLLFAKMKNS-GVVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISS 290
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
AL+ +Y C + A +L++EMP K+++ T+MVSGY ++E AR +FD P +D+V
Sbjct: 291 ALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVS 350
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W+AMI+GYV N+ +EA++LF MQ ++ D+ ++++++ CA LG+L++ KWIH +I
Sbjct: 351 WSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIK 410
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + + ALI+M+AKCG I AL +F E+ K+ +WTS+I AM+G +L
Sbjct: 411 NSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLR 470
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF QM GA+P+++TF+ +L AC H GLV EGR F++M + Y I+PK EHYGC++DLL
Sbjct: 471 LFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLL 530
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRA L+ EA LI + E N VP++G+LL+AC ++G++ +G A + +++
Sbjct: 531 GRAKLMQEAVSLIESMHLEPN---VPIWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDG 587
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
LL IY ++ + VR MK V K G S +E+N HEF G H E +
Sbjct: 588 ASVLLLKIYMKSDNLNNAQEVRGVMKLHRVSKETGLSWMELNEPFHEFAAGGEKHPESGK 647
Query: 589 IY 590
I+
Sbjct: 648 IF 649
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 189/396 (47%), Gaps = 66/396 (16%)
Query: 42 EKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL 101
K+F + ++++ +++ ++ + +++++LLLF+K++ GV PD V A G +
Sbjct: 205 RKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVLPACGHI 264
Query: 102 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE------------- 148
++ G+ +H Y++ + + ++ ++++ +Y + +KL++E
Sbjct: 265 RHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMV 324
Query: 149 ------------------MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
MP+KDVVSW+ ISG+V + +A+ +F M Q C + DE
Sbjct: 325 SGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGM-QECGIRSDE 383
Query: 191 GTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T++S +SAC L +L+ K IH +I N L + NAL+DM+ KCG ++ A +F+E
Sbjct: 384 ITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNE 443
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
MP KNVI WTSM+S + G +S +R LF
Sbjct: 444 MPLKNVITWTSMISAFAMHGD--------GKSSLR-----------------------LF 472
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAK 368
+M+ +P++ ++LL C G + +G+ + + + I ++++ +
Sbjct: 473 EQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGR 532
Query: 369 CGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
L+++A+ + + E + W S++ M+G +
Sbjct: 533 AKLMQEAVSLIESMHLEPNVPIWGSLLAACWMHGDL 568
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 119/253 (47%), Gaps = 10/253 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A IF + +++++ +I + ++L LF+ ++E G+ D T V A
Sbjct: 336 ARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACAN 395
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
LG + K + +H ++ +GL ++CN+++DM+ G I +F+EMP K+V++W
Sbjct: 396 LGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSM 455
Query: 161 ISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
IS + ++ +F +M+ +G P+E T +S L AC + G+ + + Q+
Sbjct: 456 ISAFAMHGDGKSSLRLFEQMKDEGAE--PNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQ 513
Query: 220 LEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE---- 272
P + ++D+ + + EA L + M NV W S+++ G L+
Sbjct: 514 YGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVPIWGSLLAACWMHGDLKLGAF 573
Query: 273 KARDLFDRSPVRD 285
A+ + P D
Sbjct: 574 AAKKILQLDPNHD 586
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 319/571 (55%), Gaps = 11/571 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ A+++F +I P + LI AF +G +++ L++ LR RG+ P N + V
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA G G+ + ++VH ++ G+ D ++ N+++ YG + +++FD++ KDVV
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCN-LMPDEGTVVSTLSACTALKNLELGKEIHR 214
SW S +V C + VF M G N + P+ T+ S L AC+ LK+L+ G+ IH
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEM--GWNGVKPNSVTLSSILPACSELKDLKSGRAIHG 257
Query: 215 Y-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
+ + + + +AL+ +Y +C + +AR +FD MP+++V+ W +++ Y + +K
Sbjct: 258 FAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDK 317
Query: 274 ARDLFDRSPVR----DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
LF + + D W A+I G ++ + ++AV + R+MQ + KP++ + + L
Sbjct: 318 GLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLP 377
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C+ L +L GK +H Y+ + + D TAL+ MYAKCG + + +F + KD +
Sbjct: 378 ACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVA 437
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W ++I AM+G + L LF M+ G KP+ +TF GVLS CSH LV+EG + FN+M
Sbjct: 438 WNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMG 497
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+ ++P HY C++D+ RAG L EA E I+++P E +GALL ACR+Y NV
Sbjct: 498 RDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPT---ASAWGALLGACRVYKNV 554
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
++ + A L +IE + + L NI +A W + + R MKE G+ K PGCS +++
Sbjct: 555 ELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQV 614
Query: 570 NGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+H F+VGD ++ E +IY+ LD + + +
Sbjct: 615 GDRVHTFVVGDKNNMESDKIYNFLDELGEKM 645
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 134/318 (42%), Gaps = 16/318 (5%)
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
++ +N G +A+ LFD P D + +I+ + +EA+ L+ ++ +KP
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
+ + + C G + K +H + DA + ALI Y KC +E A +F
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
+L KD SWTS+ G L +F +M G KP+ +T +L ACS +
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKS 251
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
GR I+ + L+ L R + +A + +P+ + V + +L
Sbjct: 252 GRAIHGFAVRHGMIE-NVFVCSALVSLYARCLSVKQARLVFDLMPHRD----VVSWNGVL 306
Query: 501 SACRIYGNVDMGEKLAALLEK--IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+A D G L + + +E+ +++++ ++ + E + +KM+ +G
Sbjct: 307 TAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQT-EKAVEMLRKMQNLGF 365
Query: 559 RK--------VPGCSSIE 568
+ +P CS +E
Sbjct: 366 KPNQITISSFLPACSILE 383
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 326/630 (51%), Gaps = 75/630 (11%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F + + +++N LI + G + +L ++ K R G+ PD FT V A G
Sbjct: 175 ARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGS 234
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L VK+G VHG + K G+ D + N ++ MY ++ +++F +M KD V+WN
Sbjct: 235 LMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTM 294
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
I G+ + R E +V +F M G +PD ++ ST+ AC +L++GK +H+Y I
Sbjct: 295 ICGYAQLGRHEASVKLFMDMIDG--FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF- 278
E + N L+DMY KCG L A+E+FD K+ + W S+++GY G ++ + F
Sbjct: 353 FECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK 412
Query: 279 ----DRSPVR---------------------------------DIVLWTAMINGYVQFNR 301
+R P ++++ ++++ Y +
Sbjct: 413 MMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGE 472
Query: 302 FDEAVALFREM-------------------------QIIR------LKPDKFILVALLTG 330
D+ + +F M Q+I L PD+ ++ +L
Sbjct: 473 MDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPM 532
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C+ L QGK IHGYI ++ + + ALIEMY+KCG +E +++F ++EKD +W
Sbjct: 533 CSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTW 592
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
T++I M G+ KAL+ F M G PD + FI + ACSH G+V EG RFF+ M
Sbjct: 593 TALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKT 652
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
Y ++P++EHY C++DLL R+GLL +AEE I +P + + L+GALLSACR GN +
Sbjct: 653 DYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPD---ASLWGALLSACRARGNTN 709
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+ ++++ + ++ S D+ ++ L++NIYA+ +W+ V VR MK G++K PG S IEI
Sbjct: 710 IAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQ 769
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++ F GD S + ++ +L+ + + +
Sbjct: 770 KRVYVFRTGDKSFEQYDKVKDLLEYLVRLM 799
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 243/477 (50%), Gaps = 41/477 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC--LLAYNLLI 60
QL+ + + I GL + KL+ + + + + +F SI SP + +N +I
Sbjct: 37 QLRTVHSLIITSGLSLSVIFSGKLI--SKYAQVKDPISSVSVFRSI-SPTNNVYLWNSII 93
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A G F ++L ++++RE+ + PD FT+P V + + +++ G VH + ++ G E
Sbjct: 94 RALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFE 153
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y+ N+++DMY + N + +F+EM ++D VSWN ISG+ +EDA+D++ +
Sbjct: 154 SDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKF 213
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
R ++PD T+ S L AC +L ++ G +H I + + I+GN LL MY K
Sbjct: 214 RM-TGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFER 272
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L EAR +F +M K+ + W +M+ GY G+ E + LF MI+G+V
Sbjct: 273 LREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF-----------MDMIDGFV-- 319
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
PD + + + C Q G L+ GK++H Y+ + D V
Sbjct: 320 -------------------PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
LI+MYAKCG + A E+F + KD+ +W S+I G +G + LE F +M+ K
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERK 419
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
PD +TF+ +LS S +++GR + + + + +L L+D+ + G +D+
Sbjct: 420 PDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDD 475
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 169/377 (44%), Gaps = 44/377 (11%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYG-VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
VH ++ +GL ++ Y V I +V P +V WN I
Sbjct: 41 VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMG 227
F A+ + MR+ L PD T S +++C + +LELG +H + + E +G
Sbjct: 101 LFTQALGYYTEMREK-KLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NAL+DMY + L AR +F+EM N RD V
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSN-------------------------------RDSV 188
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W ++I+GY +++A+ ++ + ++ + PD F + ++L C L A+++G +HG I
Sbjct: 189 SWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ I D ++ L+ MY K + +A +F ++ KD+ +W ++ICG A G+ ++
Sbjct: 249 EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASV 308
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE--HYGC-- 463
+LF MI G PD ++ + AC G + G+ Y I E C
Sbjct: 309 KLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGK-----FVHKYLIGSGFECDTVACNI 362
Query: 464 LIDLLGRAGLLDEAEEL 480
LID+ + G L A+E+
Sbjct: 363 LIDMYAKCGDLLAAQEV 379
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q K+I IF+ G + N N L+ + G+L K+F ++ ++ + LI A
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEM--YSKCGSLENCIKVFKYMKEKDVVTWTALISA 598
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTY-PFVFKAVGWLGEVKKGEKVHGYV-VKTGLE 120
F G +K+L F + GV PD+ + F+F A G VK+G + + LE
Sbjct: 599 FGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIF-ACSHSGMVKEGLRFFDRMKTDYNLE 657
Query: 121 --FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISG 163
+ Y C ++D+ G + ++ MP K D W +S
Sbjct: 658 PRMEHYAC--VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 202/644 (31%), Positives = 334/644 (51%), Gaps = 81/644 (12%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPS-HGNLLYAEKIFGSIQSPCLLAYNLLI 60
L ++ ++ + L + +L+ P+ ++ YA K+F + P +N +I
Sbjct: 31 AHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMI 90
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVK---KGEKVHGYVVKT 117
+ ++ + R +L +F ++R RGVSPDN+T V A +K G+ +H V +
Sbjct: 91 RGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRI 150
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G D +V + +++ YG + K+F+EM ++DVVSW IS +C ++ + +
Sbjct: 151 GFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKML 210
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCK 236
M Q ++P++ T++S LSAC + ++ G+ ++ + + +E + NAL+ MY K
Sbjct: 211 SEM-QAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTK 269
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVN----------------------------- 267
CGCLS+A E F MP + W +++ G+V
Sbjct: 270 CGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSV 329
Query: 268 ---CGQLEKARD-------LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR------- 310
C QL + R + D D +L ++IN Y + A +F+
Sbjct: 330 LSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDV 389
Query: 311 ------------------------EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
EM+I + + LV+LL+ C+QLGAL++G+ IH Y
Sbjct: 390 VSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSY 449
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I E + D + +AL++MYAKCG I+ A EIF +++ K SW ++I GLA NG +A
Sbjct: 450 IEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEA 509
Query: 407 LELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
+ELF QM+ KPD IT VL AC+H G+VDEG R+F M+ + + P EHYGC++
Sbjct: 510 VELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTEHYGCIV 568
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DLLGRAG+LDEA I+K+P E N +I +G+LL+ACR++ +D+G+ + + +
Sbjct: 569 DLLGRAGMLDEAFHFIKKMPIEPNPVI---WGSLLAACRVHHRMDLGKVIGQHIVNVAPN 625
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
D H L++N++A ++W+DV +VR M G+ K PG SS+++
Sbjct: 626 DVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
>gi|356534299|ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 634
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 214/610 (35%), Positives = 352/610 (57%), Gaps = 48/610 (7%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+ L QI A+IF +G Q+ +L+ +PS L ++F +Q+P + +N +I+
Sbjct: 50 SHLLQIHARIFYLGAHQDNLIATRLI--GHYPSRAAL----RVFHHLQNPNIFPFNAIIR 103
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A+ G F +L +F+ L+ R +SP++ T+ F+FK +V+ E++H ++ K G
Sbjct: 104 VLAQDGHFFHALSVFNYLKRRSLSPNDLTFSFLFKPCFRTKDVRYVEQIHAHIQKIGFLS 163
Query: 122 DTYVCNSIMDMYGV-LGKICNVKKLFDEMPDKDVVS-WNVSISGHVKCMRFEDAVDVFRR 179
D +VCN ++ +Y + + +K+FDE+PDK +VS W I+G + E+ + +F+
Sbjct: 164 DPFVCNGLVSVYAKGFNSLVSARKVFDEIPDKMLVSCWTNLITGFAQSGHSEEVLQLFQV 223
Query: 180 M-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
M RQ NL+P T+VS LSAC++L E+ K I +++N LE ++G+ +
Sbjct: 224 MVRQ--NLLPQSDTMVSVLSACSSL---EMPK-IEKWVNVFLE---LVGDGV-------- 266
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR---SPVRDIVLWTAMING 295
RE + N T +V + G++EK+R+ FDR S +V W AMIN
Sbjct: 267 ---STRETCHDSVN------TVLVYLFGKWGRIEKSRENFDRISTSGKSSVVPWNAMINA 317
Query: 296 YVQFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI----NEN 350
YVQ E + LFR M + +P+ +V++L+ CAQ+G L G W+HGY+ + +
Sbjct: 318 YVQNGCPVEGLNLFRMMVEEETTRPNHITMVSVLSACAQIGDLSFGSWVHGYLISLGHRH 377
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
I + ++AT+LI+MY+KCG ++KA ++F KD + ++I GLA+ GK AL LF
Sbjct: 378 TIGSNQILATSLIDMYSKCGNLDKAKKVFEHTVSKDVVLFNAMIMGLAVYGKGEDALRLF 437
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
++ G +P+ TF+G LSACSH GL+ GR+ F +T + LEH C IDLL R
Sbjct: 438 YKIPEFGLQPNAGTFLGALSACSHSGLLVRGRQIFRELTLSTTL--TLEHCACYIDLLAR 495
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
G ++EA E++ +P + N + +GALL C ++ V++ ++++ L +++ +S+ +
Sbjct: 496 VGCIEEAIEVVTSMPFKPNNFV---WGALLGGCLLHSRVELAQEVSRRLVEVDPDNSAGY 552
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
+LAN AS N+W DV+ +R +MKE GV+K PG S I ++G +HEFLVG SH E++ IY
Sbjct: 553 VMLANALASDNQWSDVSGLRLEMKEKGVKKQPGSSWIIVDGAVHEFLVGCLSHPEIEGIY 612
Query: 591 SMLDRMAKTL 600
L + K +
Sbjct: 613 HTLAGLVKNM 622
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 284/478 (59%), Gaps = 6/478 (1%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ Y N ++ Y LGKI +KLFD+MP+KDVVSWN + + K DA+ +R +R
Sbjct: 116 NLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELR 175
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCL 240
+ + +E + L+ C +K LEL K+ H + + ++ +++LD Y KC +
Sbjct: 176 R-LGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEM 234
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR LFDEM ++V+ WT+MVSGY G +E AR+LFD P ++ V WT++I GY + +
Sbjct: 235 GDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHD 294
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+A+ LF +M + ++PD+F + L A + +L GK IHGY+ I + +V +
Sbjct: 295 LGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVS 354
Query: 361 ALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+LI+MY+KCG +E +F + +K D W +II LA +G+ +A+++F M+ G K
Sbjct: 355 SLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMK 414
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD IT I +L+ACSH GLV EG R + ++T + + P EHY CLIDLLGRAG D
Sbjct: 415 PDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMN 474
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+ K+P + N+ I + ALL CR++GN++ G ++A + +++ + S+ + LL++I+A+
Sbjct: 475 QLEKMPCKPNDEI---WNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAA 531
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
RWE V NVRQ M E VRK S IEI +H F D H + IY L ++A
Sbjct: 532 VGRWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYLALKQLA 589
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 172/349 (49%), Gaps = 37/349 (10%)
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELFDE 249
T+ L C K+L+LGK +H ++ P + N L++MY KCG A ++FDE
Sbjct: 52 TLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDE 111
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
M +N+ W M+SGY G+++ AR LFD+ P +D+V W M+ Y + ++A+ +
Sbjct: 112 MSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFY 171
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
RE++ + + +++ LL C ++ LE K HG + + V+++++++ YAKC
Sbjct: 172 RELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKC 231
Query: 370 -------------------------------GLIEKALEIFYELREKDAASWTSIICGLA 398
G +E A E+F + EK+ +WTS+I G A
Sbjct: 232 SEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYA 291
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+ +KALELF++M++ +PD TF L A + ++ G++ + I+P
Sbjct: 292 RHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRT-NIRPNT 350
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
LID+ + G L E L+ + + +++ L+ ++S+ +G
Sbjct: 351 IVVSSLIDMYSKCGCL-EVGRLVFDLMGDKWDVV--LWNTIISSLAQHG 396
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 206/486 (42%), Gaps = 99/486 (20%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + ++++N ++ A+AK G +L + +LR G+ + +++ +
Sbjct: 131 GKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLL 190
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ E++ ++ HG V+ G + + +S++D Y ++ + ++LFDEM +DV+
Sbjct: 191 NICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVL 250
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQ------------------------------GCN 185
+W +SG+ + E A ++F M + N
Sbjct: 251 AWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALN 310
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEAR 244
+ PD+ T S L A ++ +L GK+IH Y I + I+ ++L+DMY KCGCL R
Sbjct: 311 IRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGR 370
Query: 245 ELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+FD M +K +V+ W +++S Q R
Sbjct: 371 LVFDLMGDKWDVVLWNTIIS-------------------------------SLAQHGRGQ 399
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ +F +M + +KPD+ L+ LL C+ G +++G ++ E+ + V+
Sbjct: 400 EAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLY----ESITSCHGVIPNQ-- 453
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
E YA C + + G+ L +Q+ KP+D
Sbjct: 454 EHYA---------------------------CLIDLLGRAGHFDTLMNQLEKMPCKPNDE 486
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+ +L C G ++ GR ++ ++ P+ L+ + A E E +R+
Sbjct: 487 IWNALLGVCRMHGNIEFGRE---VAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQ 543
Query: 484 IPNENN 489
+ NE +
Sbjct: 544 LMNERH 549
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/480 (38%), Positives = 290/480 (60%), Gaps = 12/480 (2%)
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
++KL ++ + +VSW I+ + R +A F MR + P+ T ++ LS C
Sbjct: 14 IQKL-NQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLA-GVEPNHITFIALLSGCG 71
Query: 202 ALKNLE--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
+ LG +H Y + + T +M G A+L MY K + +AR +FD M +KN +
Sbjct: 72 DFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVT 131
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W +M+ GY+ GQ++ A +FD+ P RD++ WTAMING+V+ +EA+A FREMQI +
Sbjct: 132 WNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGV 191
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
KPD ++A L C LGAL G W+H Y+ + V+ +LI++Y +CG +E A E
Sbjct: 192 KPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFARE 251
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F ++ ++ SW S+I G A NG +++L F +M G KPD +TF G L+ACSH GL
Sbjct: 252 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 311
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
V+EG R+F TM ++I P++EHYGCL+DL RAG L+EA ++++ +P + NE+++ G
Sbjct: 312 VEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVI---G 368
Query: 498 ALLSACRIYG-NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
+LL+ACR +G N + E+L L + K S + +L+N+YA+ +WE + +R+KMK +
Sbjct: 369 SLLAACRTHGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGL 428
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK--TLLDSKQNAMEGDNLV 614
G++K PG SSIEI+ H F+ GD +H E +I +L+ ++ L + + GD+L
Sbjct: 429 GLKKQPGFSSIEIDDCTHVFMAGDSAHVETADIREVLELVSSDLQLQGCEDETLAGDHLT 488
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 171/365 (46%), Gaps = 68/365 (18%)
Query: 50 SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL--GEVKKG 107
S ++++ I + G ++ FS +R GV P++ T+ + G G G
Sbjct: 22 SETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALG 81
Query: 108 EKVHGYVVKTG--------------------------LEFD------TYVCNSIMDMYGV 135
+ +HGY K G L FD + N+++D Y
Sbjct: 82 DLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMR 141
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
G++ N K+FD+MP++D++SW I+G VK E+A+ FR M Q + PD +++
Sbjct: 142 NGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREM-QISGVKPDYVAIIA 200
Query: 196 TLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L+ACT L L G +HRY+ +Q+ + + N+L+D+YC+CGC+ ARE+FD+M +
Sbjct: 201 ALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRT 260
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
V+ W S++ G+ G E++ FR+MQ
Sbjct: 261 VVSWNSVIVGFAANGNAH-------------------------------ESLVYFRKMQE 289
Query: 315 IRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
KPD LT C+ +G +E+G ++ ++RI+ L+++Y++ G +E
Sbjct: 290 EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLE 349
Query: 374 KALEI 378
+AL++
Sbjct: 350 EALKV 354
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + L+++ +I F KKG ++L F +++ GV PD
Sbjct: 143 GQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAAL 202
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G VH YV+ + + V NS++D+Y G + +++FD+M + VV
Sbjct: 203 NACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVV 262
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G +++ FR+M++ PD T L+AC+ + +E G +
Sbjct: 263 SWNSVIVGFAANGNAHESLVYFRKMQEE-GFKPDAVTFTGALTACSHVGLVEEGLRYFQT 321
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK 253
+ ++ +P + + L+D+Y + G L EA ++ MP K
Sbjct: 322 MKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMK 361
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 334/599 (55%), Gaps = 40/599 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ +F++G + + L+ + +G L A K+F + + ++N +I F
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHL--YSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G+ +L + ++++ GV D T + +V G +H +V+K GL+ D +
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVF 258
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V N++++MY G++ + + +FD+M +D+VSWN I+ + + A+ F+ M+ G
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG- 317
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSE 242
+ PD TVVS S + L + + + I ++ + L+ ++GNAL++MY K G
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG---- 373
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
Y+NC A +FD+ P +D + W ++ GY Q
Sbjct: 374 ----------------------YMNC-----AHTVFDQLPRKDTISWNTLVTGYTQNGLA 406
Query: 303 DEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
EA+ + M+ R P++ V+++ + +GAL+QG IH + +N + +D VAT
Sbjct: 407 SEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATC 466
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI++Y KCG +E A+ +FYE+ + W +II L ++G+ +AL+LF M++ K D
Sbjct: 467 LIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKAD 526
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
ITF+ +LSACSH GLVDEG++ F+ M + Y I+P L+HYGC++DLLGRAG L++A EL+
Sbjct: 527 HITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELV 586
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
R +P + + I +GALLSAC+IYGN ++G + L +++S++ ++ LL+NIYA+
Sbjct: 587 RNMPIQPDASI---WGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTE 643
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+WE V VR ++ G+RK PG SS+ + F G+ +H + EIY L ++ +
Sbjct: 644 KWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKM 702
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 229/509 (44%), Gaps = 86/509 (16%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
V +K+H ++ G + + ++++Y G I + FD + K++ SWN IS
Sbjct: 35 VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISA 94
Query: 164 HVKCMRFEDAVDVFRRMRQGC---NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQE 219
+V+ ++ +A++ ++ C +L PD T L AC +L + GK++H +
Sbjct: 95 YVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMG 151
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
E + +L+ +Y + G L A ++F +MP K+V W +M+SG+ G A + +
Sbjct: 152 FEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLN 211
Query: 280 RS----------------PV-----------------------RDIVLWTAMINGYVQFN 300
R PV D+ + A+IN Y +F
Sbjct: 212 RMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFG 271
Query: 301 R-------FDE------------------------AVALFREMQIIRLKPDKFILVALLT 329
R FD+ A+ F+ MQ+ ++PD +V+L +
Sbjct: 272 RLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331
Query: 330 GCAQLGALEQGKWIHGY-INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+QL + I G+ I + D V+ AL+ MYAK G + A +F +L KD
Sbjct: 332 IFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTI 391
Query: 389 SWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SW +++ G NG ++A++ ++ M P+ T++ ++ A SH G + +G +
Sbjct: 392 SWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAK 451
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
+ + + + CLIDL G+ G L++A L +IP + + VP + A++++ I+G
Sbjct: 452 LIK-NSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS---VP-WNAIIASLGIHG 506
Query: 508 NVDMGEKL--AALLEKIESKDSSFHTLLA 534
+ +L L E++++ +F +LL+
Sbjct: 507 RGEEALQLFKDMLAERVKADHITFVSLLS 535
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 326/630 (51%), Gaps = 75/630 (11%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F + + +++N LI + G + +L ++ K R G+ PD FT V A G
Sbjct: 175 ARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGS 234
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L VK+G VHG + K G+ D + N ++ MY ++ +++F +M KD V+WN
Sbjct: 235 LMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTM 294
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
I G+ + R E +V +F M G +PD ++ ST+ AC +L++GK +H+Y I
Sbjct: 295 ICGYAQLGRHEASVKLFMDMIDG--FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF- 278
E + N L+DMY KCG L A+E+FD K+ + W S+++GY G ++ + F
Sbjct: 353 FECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK 412
Query: 279 ----DRSPVR---------------------------------DIVLWTAMINGYVQFNR 301
+R P ++++ ++++ Y +
Sbjct: 413 MMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGE 472
Query: 302 FDEAVALFREM-------------------------QIIR------LKPDKFILVALLTG 330
D+ + +F M Q+I L PD+ ++ +L
Sbjct: 473 MDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPM 532
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C+ L QGK IHGYI ++ + + ALIEMY+KCG +E +++F ++EKD +W
Sbjct: 533 CSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTW 592
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
T++I M G+ KAL+ F M G PD + FI + ACSH G+V EG RFF+ M
Sbjct: 593 TALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKT 652
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
Y ++P++EHY C++DLL R+GLL +AEE I +P + + L+GALLSACR GN +
Sbjct: 653 DYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPD---ASLWGALLSACRARGNTN 709
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+ ++++ + ++ S D+ ++ L++NIYA+ +W+ V VR MK G++K PG S IEI
Sbjct: 710 IAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQ 769
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++ F GD S + ++ +L+ + + +
Sbjct: 770 KRVYVFRTGDKSFEQYDKVKDLLEYLVRLM 799
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 243/477 (50%), Gaps = 41/477 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC--LLAYNLLI 60
QL+ + + I GL + KL+ + + + + +F SI SP + +N +I
Sbjct: 37 QLRTVHSLIITSGLSLSVIFSGKLI--SKYAQVKDPISSVSVFRSI-SPTNNVYLWNSII 93
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A G F ++L ++++RE+ + PD FT+P V + + +++ G VH + ++ G E
Sbjct: 94 RALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFE 153
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y+ N+++DMY + N + +F+EM ++D VSWN ISG+ +EDA+D++ +
Sbjct: 154 SDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKF 213
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
R ++PD T+ S L AC +L ++ G +H I + + I+GN LL MY K
Sbjct: 214 RM-TGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFER 272
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L EAR +F +M K+ + W +M+ GY G+ E + LF MI+G+V
Sbjct: 273 LREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF-----------MDMIDGFV-- 319
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
PD + + + C Q G L+ GK++H Y+ + D V
Sbjct: 320 -------------------PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
LI+MYAKCG + A E+F + KD+ +W S+I G +G + LE F +M+ K
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERK 419
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
PD +TF+ +LS S +++GR + + + + +L L+D+ + G +D+
Sbjct: 420 PDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDD 475
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 169/378 (44%), Gaps = 44/378 (11%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYG-VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
VH ++ +GL ++ Y V I +V P +V WN I
Sbjct: 41 VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMG 227
F A+ + MR+ L PD T S +++C + +LELG +H + + E +G
Sbjct: 101 LFTQALGYYTEMREK-KLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NAL+DMY + L AR +F+EM N RD V
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSN-------------------------------RDSV 188
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W ++I+GY +++A+ ++ + ++ + PD F + ++L C L A+++G +HG I
Sbjct: 189 SWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ I D ++ L+ MY K + +A +F ++ KD+ +W ++ICG A G+ ++
Sbjct: 249 EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASV 308
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE--HYGC-- 463
+LF MI G PD ++ + AC G + G+ Y I E C
Sbjct: 309 KLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGK-----FVHKYLIGSGFECDTVACNI 362
Query: 464 LIDLLGRAGLLDEAEELI 481
LID+ + G L A+E+
Sbjct: 363 LIDMYAKCGDLLAAQEVF 380
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q K+I IF+ G + N N L+ + G+L K+F ++ ++ + LI A
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEM--YSKCGSLENCIKVFKYMKEKDVVTWTALISA 598
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTY-PFVFKAVGWLGEVKKGEKVHGYV-VKTGLE 120
F G +K+L F + GV PD+ + F+F A G VK+G + + LE
Sbjct: 599 FGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIF-ACSHSGMVKEGLRFFDRMKTDYNLE 657
Query: 121 --FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISG 163
+ Y C ++D+ G + ++ MP K D W +S
Sbjct: 658 PRMEHYAC--VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 337/629 (53%), Gaps = 73/629 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQIQA I L P + +L+ + + YA ++F I P + I
Sbjct: 15 INQLKQIQALIIIKYLSLTPLFIRRLL------NASFIQYARQVFDQIPHPDQGVHCSFI 68
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A+++ ++L F + + V FT P +FK+ L + G++VH V++ G
Sbjct: 69 TAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFH 128
Query: 121 FDTYVCNSIMDMY--------------GVL-----------------GKICNVKKLFDEM 149
+ N++++ Y G+L G++ ++LFD+M
Sbjct: 129 SSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKM 188
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
D+ +VSWN IS + + + +F+RM+ + C P+E T+ + LS C L +LE+
Sbjct: 189 RDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE--PNEITLATVLSICAKLGDLEM 246
Query: 209 GKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
G I + L++ + L N+I T+M+ YV C
Sbjct: 247 GLRIKK-------------------------LNDNKNL-----GSNMIVSTAMLEMYVKC 276
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G ++ R +FD RD+V W+AMI GY Q R +EA+ LF M+ ++KP+ LV++L
Sbjct: 277 GAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVL 336
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+ CAQLG++E G+ I Y+ + + VA+AL+ MY+KCG I KA +IF +L ++D
Sbjct: 337 SACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNV 396
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+W S+I GLA+NG A+ L+++M KP++ITF+G+++AC+H G V+ G FF +M
Sbjct: 397 TWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSM 456
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+ I P +EH+ C++DL R+G L +A E I ++ E N +I +G LLSA RI+ N
Sbjct: 457 RSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVI---WGTLLSASRIHLN 513
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
V++ E L ++E +S + +L+NIYASA RW++ VR+ MK+ V+K S +E
Sbjct: 514 VELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVE 573
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ +H+FLVGD SH E+YS +D +A
Sbjct: 574 VEDRVHKFLVGDTSHPRSDEVYSTIDGLA 602
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/644 (31%), Positives = 334/644 (51%), Gaps = 81/644 (12%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPS-HGNLLYAEKIFGSIQSPCLLAYNLLI 60
L ++ ++ + L + +L+ P+ ++ YA K+F + P +N +I
Sbjct: 31 AHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMI 90
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVK---KGEKVHGYVVKT 117
+ ++ + R +L +F ++R RGVSPDN+T V A +K G+ +H V +
Sbjct: 91 RGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRI 150
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G D +V + +++ YG + K+F+EM ++DVVSW IS +C ++ + +
Sbjct: 151 GFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKML 210
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCK 236
M Q ++P++ T++S LSAC + ++ G+ ++ + + +E + NAL+ MY K
Sbjct: 211 SEM-QAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTK 269
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVN----------------------------- 267
CGCLS+A E F MP + W +++ G+V
Sbjct: 270 CGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSV 329
Query: 268 ---CGQLEKARD-------LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR------- 310
C QL + R + D D +L ++IN Y + A +F+
Sbjct: 330 LSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDV 389
Query: 311 ------------------------EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
EM+I + + LV+LL+ C+QLGAL++G+ IH Y
Sbjct: 390 VSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSY 449
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I E + D + +AL++MYAKCG I+ A EIF +++ K SW ++I GLA NG +A
Sbjct: 450 IEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEA 509
Query: 407 LELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
+ELF QM+ KPD IT VL AC+H G+VDEG R+F M+ + + P EHYGC++
Sbjct: 510 VELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTEHYGCIV 568
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DLLGRAG+LDEA I+K+P E N +I +G+LL+ACR++ +D+G+ + + +
Sbjct: 569 DLLGRAGMLDEAFHFIKKMPIEPNPVI---WGSLLAACRVHHRMDLGKVIGQHIVNVAPN 625
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
D H L++N++A ++W+DV +VR M G+ K PG SS+++
Sbjct: 626 DVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 279/459 (60%), Gaps = 5/459 (1%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR-MRQGCNLMPDEGTVVSTLSACTA 202
++ D + + N I H K E + D + R + G L PD TV + ACT
Sbjct: 69 QILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTG 128
Query: 203 LKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L E G ++H I + + P + L+ +Y + GCL ++F+ + + +C T+M
Sbjct: 129 LGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAM 188
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
V+ CG + AR LF+ P +D + W AMI+GY Q EA+ LF MQ+ +K +
Sbjct: 189 VTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNG 248
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
++++L+ C QLGAL+QG+W H YI N+I + + T L+++YAKCG ++KA+E+F+
Sbjct: 249 VSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWG 308
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ EK+ +W+S + GLAMNG K L+LFS M G P+ +TF+ VL CS G VDEG
Sbjct: 309 MEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 368
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
++ F++M + I+P+L+HYGCL+DL RAG L++A +I+++P + + + + +LL
Sbjct: 369 QKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAV---WSSLLH 425
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
A R+Y N+++G + + ++E+ + + LL+NIYA ++ W++V++VRQ MK GVRK
Sbjct: 426 ASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQ 485
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PGCS +E+NG +HEF VGD SH + EI ++ +++ L
Sbjct: 486 PGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRL 524
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 236/425 (55%), Gaps = 37/425 (8%)
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYC 235
R MR P+E T +S +SAC N E G IH + + LE ++ NAL+++Y
Sbjct: 625 RMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVV-NALMNLYG 683
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G L + +LF+++ KN +V W MI
Sbjct: 684 KTGDLISSCKLFEDLSVKN-------------------------------LVSWNTMIVI 712
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
++Q +E +A F + + LKPD+ +A+L C +G + + IHG I +
Sbjct: 713 HLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNAN 772
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ TAL+++YAK G +E + +F E+ D+ +WT+++ A +G A++ F M+
Sbjct: 773 TCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVH 832
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G PD +TF +L+ACSH GLV+EGR +F TM++ Y+I+P+L+HY C++DL+GR+GLL
Sbjct: 833 YGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQ 892
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+A LI+++P E + ++GALL ACR+Y + +G K A L ++E +D + +L+N
Sbjct: 893 DAYGLIKEMPMEPSS---GVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSN 949
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IY+++ W+D + +R MK+ G+ + G S IE IH+F+VGD SH E ++I L
Sbjct: 950 IYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKE 1009
Query: 596 MAKTL 600
+ K +
Sbjct: 1010 IRKKM 1014
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 204/429 (47%), Gaps = 70/429 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+++QI A+++ G ++ + + + H L YA +I P L A N +I+A
Sbjct: 29 EIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRSDKPTLFALNSMIRA 88
Query: 63 FAKKGSFRKSLLLFSKLRE--RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K KS +S++ G+ PDN+T F+ +A LG + G +VHG ++ G +
Sbjct: 89 HCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFD 148
Query: 121 FDTYVCNSIMDMYGVLG------KICN-------------------------VKKLFDEM 149
D +V ++ +Y LG K+ N +KLF+ M
Sbjct: 149 NDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGM 208
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
P+KD ++WN ISG+ + +A+++F M+ +G + + +++S LSACT L L+
Sbjct: 209 PEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKV--NGVSMISVLSACTQLGALDQ 266
Query: 209 GKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+ H YI + +++ T +G L+D+Y KCG + +A E+F M KNV W+S ++G
Sbjct: 267 GRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLA- 325
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+NG+ + + + LF M+ + P+ V++
Sbjct: 326 -------------------------MNGFGE-----KCLKLFSLMKQDGVTPNAVTFVSV 355
Query: 328 LTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK- 385
L GC+ +G +++G K NE I L+++YA+ G +E A+ I ++ K
Sbjct: 356 LRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKA 415
Query: 386 DAASWTSII 394
AA W+S++
Sbjct: 416 HAAVWSSLL 424
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 152/334 (45%), Gaps = 37/334 (11%)
Query: 66 KGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+G K + S++ E G P+ T+ + A G ++G +HG V+K+G+ +
Sbjct: 613 RGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEV 672
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V N++M++YG G + + KLF+++ K++VSWN I H++ E+ + F M +
Sbjct: 673 KVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYF-NMSRW 731
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSE 242
L PD+ T ++ L C + + L + IH I + ALLD+Y K G L +
Sbjct: 732 VGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLED 791
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
+ +F E+ + + + WT+M++ Y G RD
Sbjct: 792 SSTVFLEITSPDSMAWTAMLAAYATHGY---GRD-------------------------- 822
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATA 361
A+ F M L PD LL C+ G +E+G++ +++ RI +
Sbjct: 823 --AIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSC 880
Query: 362 LIEMYAKCGLIEKALEIFYEL-REKDAASWTSII 394
++++ + GL++ A + E+ E + W +++
Sbjct: 881 MVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALL 914
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I + + G+ + + +N LM + G+L+ + K+F + L+++N +I +
Sbjct: 659 IHGLVMKSGVLEEVKVVNALMNL--YGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQN 716
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G + L F+ R G+ PD T+ V + +G V+ + +HG ++ G +T +
Sbjct: 717 GLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCIT 776
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
+++D+Y LG++ + +F E+ D ++W ++ + DA+ F M L
Sbjct: 777 TALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVH-YGL 835
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEAR 244
PD T L+AC+ +E G+ +++ P + + ++D+ + G L +A
Sbjct: 836 SPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAY 895
Query: 245 ELFDEMP 251
L EMP
Sbjct: 896 GLIKEMP 902
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/550 (34%), Positives = 311/550 (56%), Gaps = 45/550 (8%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+++ ++ K +L++ +++ GV PD F YP + K+ G G H +V+K G
Sbjct: 1 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLG 55
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
D +V N+++DMY + V WN +SG+ K A +F
Sbjct: 56 HGSDAFVRNAVIDMYA-----------------RKVADWNAMVSGYWKWESEGQAQWLF- 97
Query: 179 RMRQGCNLMPDEGTVVST--LSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
++MP+ + T ++ +K+LE + RY + E + + NA+L Y +
Sbjct: 98 ------DVMPERNVITWTAMVTGYAKVKDLEAAR---RYFDCMPERSVVSWNAMLSGYAQ 148
Query: 237 CGCLSEARELFDEM--PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
G EA LFDEM +N + W +M+S Y+ G L+ AR LF+ P R++V W +MI
Sbjct: 149 NGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIA 208
Query: 295 GYVQFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY Q + A+ LF+EM +L PD+ +V++++ C LGALE G W+ ++ EN+I
Sbjct: 209 GYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIK 268
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ A+I MY++CG +E A +F E+ +D S+ ++I G A +G +A+ L S M
Sbjct: 269 LSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTM 328
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
GG +PD +TFIGVL+ACSH GL++EGR+ F ++ + P ++HY C++DLLGR G
Sbjct: 329 KEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGE 383
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L++A+ + ++P E + +YG+LL+A RI+ V++GE A L ++E +S LL
Sbjct: 384 LEDAKRTMERMPMEPH---AGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILL 440
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYASA RW+DV +R+ MK+ GV+K G S +E G +H+F+V D SH +IY +L
Sbjct: 441 SNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 500
Query: 594 DRMAKTLLDS 603
+ K + ++
Sbjct: 501 IELRKKMREA 510
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 121/241 (50%), Gaps = 11/241 (4%)
Query: 14 IGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSL 73
+G +N T N ++ + G+L A K+F ++ ++ +N +I +A+ G ++
Sbjct: 163 LGAYRNSVTWNAMI--SAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAI 220
Query: 74 LLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDM 132
LF ++ + ++PD T V A G LG ++ G V ++ + ++ N+++ M
Sbjct: 221 ELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFM 280
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y G + + K++F EM +DVVS+N ISG +A+++ M++G + PD T
Sbjct: 281 YSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG-GIEPDRVT 339
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEM 250
+ L+AC+ LE G+++ I P + + ++D+ + G L +A+ + M
Sbjct: 340 FIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERM 394
Query: 251 P 251
P
Sbjct: 395 P 395
>gi|147788829|emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]
Length = 725
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 195/495 (39%), Positives = 280/495 (56%), Gaps = 39/495 (7%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
S ++FT+ A L + K ++H +K+G D ++ N+++ Y V K
Sbjct: 6 TSHNHFTFTHALIASSSLHALHKTLEIHARAIKSGHYSDIFIQNTLLHSYVVENNXVFAK 65
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
+F + DVVSW ISG KC E+A+ F M ++ P+ T+VS +SAC L
Sbjct: 66 SVFKSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSM----DVKPNTSTLVSVVSACCGL 121
Query: 204 KNLELGKEIHRYINQELEF-TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
+ + GK IH Y + ++ I+ NALLD Y KCG L A+ LF +M ++VI WT+MV
Sbjct: 122 RAVRFGKAIHGYSLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDVISWTTMV 181
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
G G E+A ++F AM+ G EAV P++
Sbjct: 182 GGLAQGGLCEEAVEVFQ-----------AMVKG-------GEAV------------PNEV 211
Query: 323 ILVALLTGCAQLGALEQGKWIHGYIN-ENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
LV +LT C+ L AL G+W+H YI+ + VD V ALI MYAKC + A+ +F E
Sbjct: 212 TLVNVLTACSSLSALNLGRWVHSYISIRYDLVVDGNVGNALINMYAKCSDMYMAVRVFNE 271
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
L KD SW++II G+AMNG AL+ FS M+ G PDD+TFIG+LSACSH GLV++G
Sbjct: 272 LTHKDMISWSTIIGGMAMNGHGMHALQFFSLMLVHGVSPDDVTFIGLLSACSHAGLVEQG 331
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
FF M VY I P+++HY C++D+ GRAGLL+EAE IR +P E P++GALL+
Sbjct: 332 LIFFKAMNNVYGIAPQMQHYACMVDMYGRAGLLEEAEAFIRGMPMEAEG---PIWGALLN 388
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
AC+I+GN M + L + LL+N YAS+NRW+D VR M++MG++K+
Sbjct: 389 ACKIHGNEKMFGXIBQSLRNAKGVSIGTLALLSNTYASSNRWDDANKVRDMMRDMGLKKM 448
Query: 562 PGCSSIEINGIIHEF 576
GCS IE++ +I+ +
Sbjct: 449 SGCSWIEVDAMINRY 463
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 220/474 (46%), Gaps = 50/474 (10%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
N ++A+ +F SI SP ++++ +I +K G +++ F + V P+ T V
Sbjct: 60 NXVFAKSVFKSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSMD---VKPNTSTLVSVVS 116
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A L V+ G+ +HGY +++ + + N+++D Y G + + K LF +M +DV+S
Sbjct: 117 ACCGLRAVRFGKAIHGYSLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDVIS 176
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
W + G + E+AV+VF+ M +G +P+E T+V+ L+AC++L L LG+ +H YI
Sbjct: 177 WTTMVGGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTACSSLSALNLGRWVHSYI 236
Query: 217 N--QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ +L +GNAL++MY KC + A +F+E+ +K++I W++++ G G A
Sbjct: 237 SIRYDLVVDGNVGNALINMYAKCSDMYMAVRVFNELTHKDMISWSTIIGGMAMNGHGMHA 296
Query: 275 RDLFDRSPVR----DIVLWTAMINGYVQFNRFDEAVALFREMQ-IIRLKPDKFILVALLT 329
F V D V + +++ ++ + F+ M + + P ++
Sbjct: 297 LQFFSLMLVHGVSPDDVTFIGLLSACSHAGLVEQGLIFFKAMNNVYGIAPQMQHYACMVD 356
Query: 330 GCAQLGALEQGK--------------W--------IHG------YINE---NRITVDAVV 358
+ G LE+ + W IHG IB+ N V
Sbjct: 357 MYGRAGLLEEAEAFIRGMPMEAEGPIWGALLNACKIHGNEKMFGXIBQSLRNAKGVSIGT 416
Query: 359 ATALIEMYAKCGLIEKALEIFYELREK-----DAASWTSIICGLAMNGKINKALELFSQM 413
L YA + A ++ +R+ SW + AM + + A F+
Sbjct: 417 LALLSNTYASSNRWDDANKVRDMMRDMGLKKMSGCSWIEVD---AMINRYDGANRSFAFA 473
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
PD TFIG+ SA SH LV++G F T I PK++HY C++D+
Sbjct: 474 GKSRVLPDIATFIGLFSASSHKELVEQGFVFLGA-TNDDGIMPKIQHYACVVDI 526
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M + R + F L + L AL + IH ++ D + L+ Y
Sbjct: 1 MVLHRTSHNHFTFTHALIASSSLHALHKTLEIHARAIKSGHYSDIFIQNTLLHSYVVENN 60
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
A +F + D SWTSII GL+ G +A+ F M KP+ T + V+SA
Sbjct: 61 XVFAKSVFKSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSM---DVKPNTSTLVSVVSA 117
Query: 432 C 432
C
Sbjct: 118 C 118
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 216/663 (32%), Positives = 346/663 (52%), Gaps = 83/663 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A + +G Q+ L +L+ + + G+L + F IQ + ++N ++ A+
Sbjct: 68 KQLHALLLVLGKAQDVVLLTQLVTL--YATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYV 125
Query: 65 KKGSFRKSLLLFSKLRE-RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
++G +R S+ ++L GV PD +T+P V KA L + GEK+H +V+K G E D
Sbjct: 126 RRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDV 182
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YV S++ +Y G + K+F +MP +DV SWN ISG + +A+ V RM+
Sbjct: 183 YVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTE 242
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
+ D TV S L C ++ G +H Y I LE + NAL++MY K G L +
Sbjct: 243 -EVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQD 301
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF------------------------ 278
A+ +FD M ++++ W S+++ Y A F
Sbjct: 302 AQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQ 361
Query: 279 --DRSPVR--------------DIVLWTAMINGYVQFNRFDEAVALFREM---QIIR--- 316
DR R DIV+ A++N Y + D A A+F ++ +I
Sbjct: 362 LSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNT 421
Query: 317 --------------------------LKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
+ P++ V++L + +GAL+QG IHG + +N
Sbjct: 422 LITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKN 481
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ +D VAT LI+MY KCG +E A+ +FYE+ ++ + W +II L ++G KAL+LF
Sbjct: 482 CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLF 541
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
M + G K D ITF+ +LSACSH GLVDE + F+TM + Y+I+P L+HYGC++DL GR
Sbjct: 542 KDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGR 601
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
AG L++A L+ +P + + I +G LL+ACRI+GN ++G + L +++S++ ++
Sbjct: 602 AGYLEKAYNLVSNMPIQADASI---WGTLLAACRIHGNAELGTFASDRLLEVDSENVGYY 658
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
LL+NIYA+ +WE VR ++ G+RK PG SS+ + ++ F G+ SH + EIY
Sbjct: 659 VLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIY 718
Query: 591 SML 593
L
Sbjct: 719 EEL 721
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 224/500 (44%), Gaps = 96/500 (19%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+ +++H ++ G D + ++ +Y LG + F + K++ SWN +S
Sbjct: 64 INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEF 222
+V+ R+ D++D + + PD T L AC +L + G+++H ++ E
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEH 180
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS- 281
+ +L+ +Y + G + A ++F +MP ++V W +M+SG+ G + +A + DR
Sbjct: 181 DVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMK 240
Query: 282 ---------------PV-----------------------RDIVLWTAMINGYVQFNRFD 303
P+ D+ + A+IN Y +F R
Sbjct: 241 TEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQ 300
Query: 304 E-------------------------------AVALFREMQIIRLKPDKFILVALLTGCA 332
+ A+ F+EM + ++PD +V+L +
Sbjct: 301 DAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFG 360
Query: 333 QLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
QL G+ +HG++ R + VD V+ AL+ MYAK G I+ A +F +L +D SW
Sbjct: 361 QLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWN 420
Query: 392 SIICGLAMNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMT- 449
++I G A NG ++A++ ++ M G P+ T++ +L A SH G + +G + +
Sbjct: 421 TLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIK 480
Query: 450 -----EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
+V+ CLID+ G+ G L++A L +IP E + VP + A++S+
Sbjct: 481 NCLFLDVFVAT-------CLIDMYGKCGRLEDAMSLFYEIPQETS---VP-WNAIISSLG 529
Query: 505 IYGNVDMGEKLAALLEKIES 524
I+G+ GEK L + + +
Sbjct: 530 IHGH---GEKALQLFKDMRA 546
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/599 (33%), Positives = 329/599 (54%), Gaps = 44/599 (7%)
Query: 3 QLKQIQAQIFQ--IGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
LKQI + I + L++L+ C + YA ++ +Q+ + ++ LI
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAA-TQFRYARRLLCQLQTLSIQLWDSLI 74
Query: 61 KAFAKKGSF--RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
F+ + R S L + +R GV P T+P + KAV L + + H ++VK G
Sbjct: 75 GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFG 133
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
L+ D +V NS++ Y G +LFD DKDVV+W I G V+ +A+ F
Sbjct: 134 LDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFV 193
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQ-ELEFTPIMGNALLDMYCK 236
M++ + +E TVVS L A ++++ G+ +H Y+ ++ +G++L+DMY K
Sbjct: 194 EMKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C C + A+ +FD P R++V WTA+I GY
Sbjct: 253 CSCYDD-------------------------------AQKVFDEMPSRNVVTWTALIAGY 281
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ FD+ + +F EM + P++ L ++L+ CA +GAL +G+ +H Y+ +N I ++
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
T LI++Y KCG +E+A+ +F L EK+ +WT++I G A +G A +LF M+S
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS 401
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
P+++TF+ VLSAC+HGGLV+EGRR F +M + ++PK +HY C++DL GR GLL+E
Sbjct: 402 HVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEE 461
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A+ LI ++P E ++ +GAL +C ++ + ++G+ A+ + K++ S +TLLAN+
Sbjct: 462 AKALIERMPMEPTNVV---WGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANL 518
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS-EMKEIYSMLD 594
Y+ + W++V VR++MK+ V K PG S IE+ G + EF+ D E ++Y LD
Sbjct: 519 YSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLD 577
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 334/599 (55%), Gaps = 40/599 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ +F++G + + L+ + +G L A K+F + + ++N +I F
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHL--YSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G+ +L + ++++ GV D T + +V G +H +V+K GL+ D +
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVF 258
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V N++++MY G++ + + +FD+M +D+VSWN I+ + + A+ F+ M+ G
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG- 317
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSE 242
+ PD TVVS S + L + + + I ++ + L+ ++GNAL++MY K G
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG---- 373
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
Y+NC A +FD+ P +D + W ++ GY Q
Sbjct: 374 ----------------------YMNC-----AHTVFDQLPRKDTISWNTLVTGYTQNGLA 406
Query: 303 DEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
EA+ + M+ R P++ V+++ + +GAL+QG IH + +N + +D VAT
Sbjct: 407 SEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATC 466
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI++Y KCG +E A+ +FYE+ + W +II L ++G+ +AL+LF M++ K D
Sbjct: 467 LIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKAD 526
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
ITF+ +LSACSH GLVDEG++ F+ M + Y I+P L+HYGC++DLLGRAG L++A EL+
Sbjct: 527 HITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELV 586
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
R +P + + I +GALLSAC+IYGN ++G + L +++S++ ++ LL+NIYA+
Sbjct: 587 RNMPIQPDASI---WGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTE 643
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+WE V VR ++ G+RK PG SS+ + F G+ +H + EIY L ++ +
Sbjct: 644 KWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKM 702
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 229/509 (44%), Gaps = 86/509 (16%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
V +K+H ++ G + + ++++Y G I + FD + K++ SWN IS
Sbjct: 35 VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISA 94
Query: 164 HVKCMRFEDAVDVFRRMRQGC---NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQE 219
+V+ ++ +A++ ++ C +L PD T L AC +L + GK++H +
Sbjct: 95 YVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMG 151
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
E + +L+ +Y + G L A ++F +MP K+V W +M+SG+ G A + +
Sbjct: 152 FEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLN 211
Query: 280 RS----------------PV-----------------------RDIVLWTAMINGYVQFN 300
R PV D+ + A+IN Y +F
Sbjct: 212 RMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFG 271
Query: 301 R-------FDE------------------------AVALFREMQIIRLKPDKFILVALLT 329
R FD+ A+ F+ MQ+ ++PD +V+L +
Sbjct: 272 RLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331
Query: 330 GCAQLGALEQGKWIHGY-INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+QL + I G+ I + D V+ AL+ MYAK G + A +F +L KD
Sbjct: 332 IFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTI 391
Query: 389 SWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SW +++ G NG ++A++ ++ M P+ T++ ++ A SH G + +G +
Sbjct: 392 SWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAK 451
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
+ + + + CLIDL G+ G L++A L +IP + + VP + A++++ I+G
Sbjct: 452 LIK-NSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS---VP-WNAIIASLGIHG 506
Query: 508 NVDMGEKL--AALLEKIESKDSSFHTLLA 534
+ +L L E++++ +F +LL+
Sbjct: 507 RGEEALQLFKDMLAERVKADHITFVSLLS 535
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 293/520 (56%), Gaps = 37/520 (7%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
++ +VKT D Y+ N + ++ + +M +V +N I G V+ +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGN 228
A++++ +M + N+ P T S + AC + L + +H ++ + + +
Sbjct: 61 PVQALELYVQMLRA-NVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQT 119
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD--------- 279
+L+D Y G + E+ +FDEMP ++V WT+MVSG V G + A LFD
Sbjct: 120 SLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLAT 179
Query: 280 ----------------------RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
+ P RDI+ WT MIN Y Q RF EA+ +F EM +
Sbjct: 180 WNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGI 239
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
PD+ + +++ CA LGAL+ GK IH YI ++ +D + +ALI+MYAKCG ++++L
Sbjct: 240 SPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLL 299
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F++LREK+ W S+I GLA++G +AL +F +M KP+ +TF+ VLSAC+H GL
Sbjct: 300 MFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGL 359
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
++EGR+ F +MT + I P +EHYGC++DLL +AGLL+EA +LIR + E N +I +G
Sbjct: 360 IEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVI---WG 416
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
ALLS C+++ N+++ + A L +E +S ++TLL N+ A NRW + +R MKE G
Sbjct: 417 ALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQG 476
Query: 558 V-RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
V ++ PG S IE+ +H+F D SH+ EIYS+L +
Sbjct: 477 VEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAEL 516
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 200/434 (46%), Gaps = 99/434 (22%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
YA + ++ P + YN +IK F + ++L L+ ++ VSP ++T+P + KA G
Sbjct: 32 YAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSLIKACG 91
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
+ +++ E VHG+V + G + +V S++D Y +G+I ++FDEMP++DV +W
Sbjct: 92 LVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTT 151
Query: 160 SISGHVKCMRFEDA------------------VDVFRRMRQG------CNLMP------- 188
+SG V+ A +D + R+R+ N MP
Sbjct: 152 MVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISW 211
Query: 189 ------------------------------DEGTVVSTLSACTALKNLELGKEIHRYINQ 218
DE T+ + +SAC L L+LGKEIH YI Q
Sbjct: 212 TTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQ 271
Query: 219 E-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+G+AL+DMY KCG L + +F ++ KN+ CW S++ G
Sbjct: 272 HGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLA----------- 320
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
++GY +EA+A+F +M+ ++KP+ V++L+ C G +
Sbjct: 321 ---------------VHGYA-----EEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLI 360
Query: 338 EQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIIC 395
E+G K ++ I ++++ +K GL+E+AL++ ++ E +A W +++
Sbjct: 361 EEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLS 420
Query: 396 GLAMNGKINKALEL 409
G K+++ LE+
Sbjct: 421 GC----KLHRNLEI 430
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 203/582 (34%), Positives = 326/582 (56%), Gaps = 37/582 (6%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
++++ I F + G ++L LF +L E GV P++ T+ V +A G LG+ G + G
Sbjct: 149 VVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILG 208
Query: 113 YVVKTGLEFDTYVCNS-------------------------------IMDMYGVLGKICN 141
VVK G E V NS I+D Y G +
Sbjct: 209 LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLRE 268
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
+++FDEMP+++ +SW+ I+ + + E+A+ +F +M Q P+ TLSA
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFKPNISCFACTLSALA 327
Query: 202 ALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
+L+ L G IH ++ + ++ +G++L+D+YCKCG + R +FD + KNV+CW S
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
MV GY G+LE+ +LF+ P ++ W +J GY++ + ++ + +F + + P+
Sbjct: 388 MVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
K ++L CA + +L++G +HG I + I D V TAL +MYAKCG I + ++F
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVD 439
+ EK+ SWT +I GLA +G ++L LF +M + P+++ + VL ACSH GLVD
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVD 567
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
+G +FN+M +VY I+PK +HY C++DLL R+G L EAEE IR IP + + AL
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE---ANAWAAL 624
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
LS C+ Y + + E+ A L ++ +S+ + LL+NIYASA RW DV+N+R+ M+E G++
Sbjct: 625 LSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLK 684
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
K GCS +E+ +H F D SHS+ EIY L + +L
Sbjct: 685 KSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEML 726
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 199/432 (46%), Gaps = 64/432 (14%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR-- 179
D V N ++ Y G + + LFDEMP+++ VSW+ ISG +K R E+++ F R
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 180 --------------MRQGCN--------------LMPDEGTVVSTLSACTALKNLELGKE 211
+R G N + P++ T S + AC L + LG
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 212 I-HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
I + E + N+L+ + + G + AR +FD M ++V+ WT+++ YV G
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
L +AR +FD P R+ + W+AMI Y Q +EA+ LF +M KP+ L+
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
A L AL G IHG++ + I D + ++LI++Y KCG + +F + EK+ W
Sbjct: 326 LASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCW 385
Query: 391 TSIICGLAMNGKI-------------------------------NKALELFSQMISGGAK 419
S++ G ++NG++ K LE+F+ ++ G
Sbjct: 386 NSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQT 445
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+ TF VL AC+ +D+G + ++ IQ + L D+ + G + +++
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKIIKL-GIQYDIFVGTALTDMYAKCGDIGSSKQ 504
Query: 480 LIRKIPNENNEI 491
+ ++P E NEI
Sbjct: 505 VFERMP-EKNEI 515
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 182/399 (45%), Gaps = 73/399 (18%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A +IF + ++++ +I +++ G ++L LFSK+ + G P+ +
Sbjct: 264 GDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTL 323
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD-------- 147
A+ L + G +HG+V K G++ D ++ +S++D+Y GK + + +FD
Sbjct: 324 SALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVV 383
Query: 148 -----------------------EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+P+K+ SW J+G+++ + E ++VF +
Sbjct: 384 CWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSG 443
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
P++ T S L AC ++ +L+ G +H + I +++ +G AL DMY KCG + +
Sbjct: 444 Q-TPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSS 502
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+++F+ MP KN I WT M+ G G
Sbjct: 503 KQVFERMPEKNEISWTVMIQGLAESGFAV------------------------------- 531
Query: 304 EAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR----ITVDAVV 358
E++ LF EM+ + P++ +L+++L C+ G +++G W Y N I
Sbjct: 532 ESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLW---YFNSMEKVYGIKPKGKH 588
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICG 396
T ++++ ++ G + +A E + + +A +W +++ G
Sbjct: 589 YTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 126/312 (40%), Gaps = 55/312 (17%)
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
Y+NC + + + D+V+ MI+ YVQ+ +A LF EM P++
Sbjct: 66 YLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEM------PER--- 116
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+ V +ALI K G +E+++ F
Sbjct: 117 ------------------------------NEVSWSALISGLMKYGRVEESMWYFERNPF 146
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
++ SWT+ I G NG +AL+LF +++ G +P+D+TF V+ AC G G
Sbjct: 147 QNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSI 206
Query: 445 FNTMTEVYQIQPKLEHY----GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
+ ++ EHY LI L R G +D A + ++ + V + A+L
Sbjct: 207 LGLV-----VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRD----VVSWTAIL 257
Query: 501 SACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
A G D+ E E E + S+ ++A Y+ + E+ + KM + G +
Sbjct: 258 DAYVETG--DLREARRIFDEMPERNEISWSAMIAR-YSQSGYAEEALKLFSKMVQEGFKP 314
Query: 561 VPGCSSIEINGI 572
C + ++ +
Sbjct: 315 NISCFACTLSAL 326
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/535 (37%), Positives = 309/535 (57%), Gaps = 15/535 (2%)
Query: 46 GSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVK 105
G I+ P L +N +IK+ + RK+LLLF + E GV D F+ V KA LG K
Sbjct: 53 GEIKDPFL--WNAVIKSHSHGADPRKALLLFCLMLENGVLVDKFSMSLVLKACSRLGFAK 110
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+G +VHG+++K+ D ++ N ++ +Y G + +++FD MP +D VS+N I G+V
Sbjct: 111 EGMQVHGFLIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYV 170
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQEL-EFT 223
KC E A ++F +LMP E +++ S G + + E+ E
Sbjct: 171 KCGLVESAGELF-------DLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEMPEKD 223
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
I N+++ Y K G + +A+ LFD MP ++V+ W M+ GY G + +A+ LFD+ P
Sbjct: 224 LISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHQAKTLFDQMPH 283
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKW 342
RD+V + +M++G+VQ EA+ +F M+ L PD+ LV +L+ AQLG L +
Sbjct: 284 RDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAIAQLGRLTKAID 343
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H YI E R + + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G
Sbjct: 344 MHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGL 403
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
A ++ Q+ KPD ITF+GVL+ACSH GLV EG F M ++I+P+L+HYG
Sbjct: 404 GESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 463
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C++D+L R+G ++ A+ LI ++P E N++I + L+AC + + GE +A L
Sbjct: 464 CMVDILARSGSIELAKNLIEEMPIEPNDVI---WRTFLNACSHHKEFETGELVAKHLILQ 520
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
+ S + LL+N+YAS W+DV VR MKE + K+PGCS IE++G +HEFL
Sbjct: 521 AGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKKIEKLPGCSWIELDGRVHEFL 575
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 85/227 (37%), Gaps = 48/227 (21%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ +A ++F I+S + +N +I A G + + ++ R + PD+ T+ V
Sbjct: 371 GSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVL 430
Query: 96 KAVGWLGEVKKG-------EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
A G VK+G + H K Y C ++D+ G I K L +E
Sbjct: 431 NACSHSGLVKEGLLCFELMRRKH----KIEPRLQHYGC--MVDILARSGSIELAKNLIEE 484
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP + P++ + L+AC+ K E
Sbjct: 485 MP-----------------------------------IEPNDVIWRTFLNACSHHKEFET 509
Query: 209 GKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
G+ + +++ + + P L +MY G + R + M K +
Sbjct: 510 GELVAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKKI 556
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 311/567 (54%), Gaps = 38/567 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +IF S ++ +NL++ A+ + KS +F ++ GV P+ FTYP +
Sbjct: 293 GDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCML 352
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ GE+ GE++H +K G + D YV ++DMY G + +++ D + +KDVV
Sbjct: 353 RTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVV 412
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR- 214
SW I+G+V+ ++A++ F+ M Q C + PD + S +SAC +K + G +IH
Sbjct: 413 SWTSMIAGYVQHEFCKEALETFKEM-QACGIWPDNIGLASAISACAGIKAVHQGSQIHAR 471
Query: 215 -YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
Y++ I N L+ +Y +CG EA F+ + +K I W ++SG+ G
Sbjct: 472 VYVSGYSADVSIW-NGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGL--- 527
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
++EA+ +F +M K + F V+ ++ A
Sbjct: 528 ----------------------------YEEALKVFMKMDQAGAKYNVFTFVSSISASAN 559
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
L ++QGK IH + + T + ++ ALI +Y KCG IE A F+E+ +++ SW +I
Sbjct: 560 LADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTI 619
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I + +G+ +AL+LF QM G KP D+TF+GVL+ACSH GLV+EG +F +M+ +
Sbjct: 620 ITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHG 679
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I P+ +HY C++D+LGRAG LD A+ + ++P + ++ + LLSAC+++ N+++GE
Sbjct: 680 IHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMV---WRTLLSACKVHKNLEIGE 736
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
A L ++E DS+ + LL+N YA +W +R+ MK+ GVRK PG S IE+ ++
Sbjct: 737 FAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVV 796
Query: 574 HEFLVGDPSHSEMKEIYSMLDRMAKTL 600
H F VGD H +IY+ L + L
Sbjct: 797 HAFFVGDRLHPLADQIYNFLSHLNDRL 823
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 232/507 (45%), Gaps = 39/507 (7%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F + +++ ++ +A+ G +++ L+ ++ GV P + +
Sbjct: 91 GFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSIL 150
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A + G +H V K G +T+V N+++ +Y ++F +M D V
Sbjct: 151 SACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSV 210
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
++N ISGH +C + A+ +F M Q L PD T+ S L+AC+A+ +L GK++H Y
Sbjct: 211 TFNTLISGHAQCGHGDRALGIFDEM-QLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSY 269
Query: 216 I-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + IM +LLD+Y V G +E+A
Sbjct: 270 LLKAGMSLDYIMEGSLLDLY-------------------------------VKSGDIEEA 298
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+FD ++VLW M+ Y Q + ++ +F M ++P+KF +L C
Sbjct: 299 LQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
G + G+ IH +N D V+ LI+MY+K G ++KA I + EKD SWTS+I
Sbjct: 359 GEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMI 418
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
G + +ALE F +M + G PD+I +SAC+ V +G + + V
Sbjct: 419 AGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQ-IHARVYVSGY 477
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
+ + L+ L R G+ EA I E+ E I + L+S G + K
Sbjct: 478 SADVSIWNGLVYLYARCGISKEAFSSFEAI--EHKEGIT--WNGLISGFAQSGLYEEALK 533
Query: 515 LAALLEKIESKDSSFHTLLANIYASAN 541
+ +++ +K + F T +++I ASAN
Sbjct: 534 VFMKMDQAGAKYNVF-TFVSSISASAN 559
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 193/381 (50%), Gaps = 34/381 (8%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++H + GL + N ++D+Y G + +++F+E+ +D VSW +SG+ +
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT-PIMG 227
E+AV ++R M + ++P + S LSACT + +LG+ IH + ++ F+ +G
Sbjct: 123 LGEEAVRLYREMHRS-GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVG 181
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NAL+ +Y +C A +F +M + + + +++SG+ CG ++A +FD
Sbjct: 182 NALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFD-------- 233
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
EMQ+ L PD + +LL C+ +G L +GK +H Y+
Sbjct: 234 -----------------------EMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYL 270
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ +++D ++ +L+++Y K G IE+AL+IF + W ++ + K+
Sbjct: 271 LKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSF 330
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
++F +M++ G +P+ T+ +L C+H G + G + +++T Q + G LID+
Sbjct: 331 DIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ-IHSLTIKNGFQSDMYVSGVLIDM 389
Query: 468 LGRAGLLDEAEELIRKIPNEN 488
+ G LD+A+ ++ I ++
Sbjct: 390 YSKYGWLDKAQRILDMIEEKD 410
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 191/409 (46%), Gaps = 19/409 (4%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+QI + + G Q + L+ + +G L A++I I+ ++++ +I +
Sbjct: 365 EQIHSLTIKNGFQSDMYVSGVLIDM--YSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYV 422
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ +++L F +++ G+ PDN A + V +G ++H V +G D
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVS 482
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ N ++ +Y G F+ + K+ ++WN ISG + +E+A+ VF +M Q
Sbjct: 483 IWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQA- 541
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+ T VS++SA L +++ GK+IH R I + NAL+ +Y KCG + +A
Sbjct: 542 GAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDA 601
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI----VLWTAMINGYVQF 299
+ F EM +N + W ++++ G+ +A DLFD+ + + V + ++
Sbjct: 602 KMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHV 661
Query: 300 NRFDEAVALFREM---QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+E + F+ M I +PD + V + G A G L++ K ++ E I D+
Sbjct: 662 GLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRA--GQLDRAK---RFVEEMPIPADS 716
Query: 357 VVATALI---EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+V L+ +++ + E A + EL D+AS+ + A+ GK
Sbjct: 717 MVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGK 765
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 149/318 (46%), Gaps = 43/318 (13%)
Query: 196 TLSACTAL-KNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
L AC + L EIH + I L I+GN L+D+Y K G + AR +F+E+ +
Sbjct: 47 ALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVR 106
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+ + W +++SGY G E EAV L+REM
Sbjct: 107 DNVSWVAVLSGYAQNGLGE-------------------------------EAVRLYREMH 135
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+ P ++L ++L+ C + + G+ IH + + + V ALI +Y +C
Sbjct: 136 RSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFR 195
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A +F ++ D+ ++ ++I G A G ++AL +F +M G PD +T +L+ACS
Sbjct: 196 LADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACS 255
Query: 434 HGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
G + +G++ + + + + +E G L+DL ++G ++EA ++ + +
Sbjct: 256 AVGDLRKGKQLHSYLLKAGMSLDYIME--GSLLDLYVKSGDIEEALQIF----DSGDRTN 309
Query: 493 VPLYGALLSACRIYGNVD 510
V L+ +L A YG +D
Sbjct: 310 VVLWNLMLVA---YGQID 324
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 307/531 (57%), Gaps = 14/531 (2%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
Y I + P ++ I+ F+++G F+++L L+ +++ +G+ P F +A
Sbjct: 76 YVHSILYHLPHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYA 135
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
G +H K G YV +++D+Y LG + +K+FDE+ +K+VVSWN
Sbjct: 136 RTTYKMGGMSIHAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWNS 195
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
+SGH+K +A VF ++ + D + S +S + +++ + + Q
Sbjct: 196 ILSGHLKSGNLLEAQRVFDQISK-----KDVISWNSMISGYAKIGDMDRACVLFQ---QM 247
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
E NAL+ Y CG + A FD MP +N + W +M++GY CG ++ A LFD
Sbjct: 248 PEKNYSSWNALISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDSASKLFD 307
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGAL 337
+ +D++ + AMI+ + Q ++ +A+ LF EM ++PD+ L ++++ C+QLG L
Sbjct: 308 QIAKKDLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSACSQLGDL 367
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
WI Y+N+ +D + TAL+++YAKCG ++KA E+F+ L +KD +++++I G
Sbjct: 368 RFASWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYSAMISGC 427
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+NGK+ A++LF M+ P+ TF G+L+AC+H GLV EG RFF++M + + + P
Sbjct: 428 GINGKVADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMKD-HGLVPS 486
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
+HY ++DLLGRAG L +A ELI+ +P + + + +GALL AC ++ NV++GE A
Sbjct: 487 TDHYAIMVDLLGRAGRLQDAYELIKSMPMQPHSGV---WGALLLACNVHNNVELGEIAAQ 543
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+E+ +++++LLANIY+SA RW+DV +R+ KE + K+ GCS E
Sbjct: 544 HCFNLETNATAYYSLLANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCSWTE 594
>gi|414879404|tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 304/543 (55%), Gaps = 31/543 (5%)
Query: 39 LYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
L+A + S P A+ L+K +A + R++ L++++ R P + KA
Sbjct: 8 LHAIYMTSSSHDPDKWAH--LVKEYASQSLVREAALVYARNLPRRTHHQPL-LPVLLKAA 64
Query: 99 GWL--GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
E+ G+ +H +K+ D V +I+ MY G + + ++ FDEMPD++V+S
Sbjct: 65 AASSPAELGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVIS 124
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
+N ++G+ + A+ +F MR ++ T + + ++ E R+
Sbjct: 125 YNALLAGYAVAGDMDGALALFGGMRSWTHV-----TWATLIRGFAEKGDM---AEARRW- 175
Query: 217 NQELEFTP------IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
E TP + L+ Y G + ARE+FD MP +N W+SMV+GY G
Sbjct: 176 ---FEATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKAGD 232
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
E+AR +FDR P R++V W A+I GY Q ++A+ F M R+KPD+F + +LL+
Sbjct: 233 AEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEFTMASLLSA 292
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CAQLG+LEQGK +H +IN+ I + V LI+MYAKCG + A IF +R K+ W
Sbjct: 293 CAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECW 352
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I LA +G+ ++AL LF QM G KP+ IT + VL AC+HGG VDEG + FN + +
Sbjct: 353 NTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQIFNKL-D 411
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
Y ++ +EHYGCL+DLLGRAG L EA E++ + E NE+I +G+LL ACR++ + +
Sbjct: 412 AYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVI---WGSLLGACRVHRDAE 468
Query: 511 MG----EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
M E++ L S + + + +LANI A++ RWE +R+KM GV K PGCSS
Sbjct: 469 MSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRGVEKTPGCSS 528
Query: 567 IEI 569
+E+
Sbjct: 529 LEL 531
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 189/407 (46%), Gaps = 65/407 (15%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +FG ++S + + LI+ FA+KG ++ F T P +
Sbjct: 136 GDMDGALALFGGMRSWTHVTWATLIRGFAEKGDMAEARRWFEA-----------TPPGMR 184
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLE-----FD------TYVCNSIMDMYGVLGKICNVKK 144
V W V+ GYV +E FD +V +S++ Y G +
Sbjct: 185 TVVTWTVLVQ------GYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKAGDAEEARA 238
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+FD +P +++V+WN I+G+ + E A++ F M Q + PDE T+ S LSAC L
Sbjct: 239 VFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQE-RVKPDEFTMASLLSACAQLG 297
Query: 205 NLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+LE GK++H +INQE + + N L+DMY KCG L+ AR +FD M KN CW +M+S
Sbjct: 298 SLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECWNTMIS 357
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
+ GQ DEA+ LF +M+ KP+
Sbjct: 358 ALASHGQ-------------------------------SDEALHLFFQMERSGRKPNTIT 386
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
++A+L C G +++G I ++ + L+++ + G +++A EI +
Sbjct: 387 VLAVLGACTHGGFVDEGLQIFNKLDAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNMS 446
Query: 384 EK-DAASWTSII--CGLAMNGKINKAL-ELFSQMISGGAKPDDITFI 426
E+ + W S++ C + + ++++ + E ++ S A +D +I
Sbjct: 447 EEPNEVIWGSLLGACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYI 493
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 310/542 (57%), Gaps = 9/542 (1%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDN-FTYPFVFK-AVGWLGEVKKGEKVHG 112
AY I+A A + R L + LR G+ P P + + A +G H
Sbjct: 37 AYLATIRAAAT--TPRLVLAACACLRRTGLPPPGPRALPALLRSAARCVGAGAYVRGAHA 94
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+ G D +V +++ Y G + + +K+FD M +DVVSW V + + + +++
Sbjct: 95 LAFRVGSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKE 154
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALL 231
A+ F +M+ ++ D+ + + LSAC +++L GK IH Y + ++ + +AL+
Sbjct: 155 ALLQFAKMKNS-GVLSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALI 213
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
++Y C + A +L++ MP K+++ T+MV GY + E AR +FD P +D+V W+A
Sbjct: 214 NLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSA 273
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI+GY N+ +EA++LF +MQ ++PD+ ++++++ CA LG+L++ KWIH +I N
Sbjct: 274 MISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNG 333
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + ALI+M+AKCG I AL IF E+ +K+ +WTS+I AM+G AL LF
Sbjct: 334 LNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFE 393
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
QM + G +P+++TF+ +L AC H GLV EGR F++M + Y I+PK EHYGC++DLLGRA
Sbjct: 394 QMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRA 453
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
L+ EA LI + N VP++G+LL+AC ++G++ +G A + +++
Sbjct: 454 KLMQEAVNLIESMHLRPN---VPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASV 510
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LL+ IY ++ D VR MK GV K G S +++N HEF G + E +I+
Sbjct: 511 LLSKIYMKSDNLNDAQEVRDVMKLQGVSKETGLSWMDLNEPFHEFTAGGEKYPENDKIFQ 570
Query: 592 ML 593
L
Sbjct: 571 KL 572
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 187/397 (47%), Gaps = 66/397 (16%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + ++++ +++ ++ + +++++LL F+K++ GV D V A G
Sbjct: 124 ARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACGH 183
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE------------ 148
+ ++ G+ +H Y++ + + + ++ ++++++Y + +KL++
Sbjct: 184 IRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAM 243
Query: 149 -------------------MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
MP+KDVVSW+ ISG+ + +A+ +F M Q C + PD
Sbjct: 244 VFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDM-QECGIRPD 302
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
E T++S +SAC L +L+ K IH +I N L + NAL+DM+ KCG ++ A +F+
Sbjct: 303 EVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFN 362
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
EMP KNVI WTSM++ + G + A+ L
Sbjct: 363 EMPQKNVITWTSMITAFAMHGDGK-------------------------------SALCL 391
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYA 367
F +M+ ++P++ + LL C G + +G+ + + + I ++++
Sbjct: 392 FEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLG 451
Query: 368 KCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
+ L+++A+ + + + W S++ M+G +
Sbjct: 452 RAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDL 488
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A IF + +++++ +I +A ++L LF+ ++E G+ PD T V A
Sbjct: 256 ARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACAN 315
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
LG + K + +H ++ GL ++CN+++DM+ G I +F+EMP K+V++W
Sbjct: 316 LGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSM 375
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I+ + A+ +F +MR + P+E T ++ L AC + G+ + + Q+
Sbjct: 376 ITAFAMHGDGKSALCLFEQMRNE-GVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQY 434
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE----K 273
P + ++D+ + + EA L + M NV W S+++ G L+
Sbjct: 435 GIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFA 494
Query: 274 ARDLFDRSPVRD 285
A+ + P D
Sbjct: 495 AKKILQLDPNHD 506
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 45/236 (19%)
Query: 23 LNKLMVFCT-----HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
LNK++ C G + A IF + ++ + +I AFA G + +L LF
Sbjct: 334 LNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFE 393
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
++R GV P+ T+ + A G V +G + +S++ YG+
Sbjct: 394 QMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLF---------------SSMVQQYGI-- 436
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
P + V + G K M ++AV++ M +L P+ S L
Sbjct: 437 -----------EPKHEHYGCMVDLLGRAKLM--QEAVNLIESM----HLRPNVPVWGSLL 479
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGNA---LLDMYCKCGCLSEARELFDEM 250
+AC +L+LG + I L+ P A L +Y K L++A+E+ D M
Sbjct: 480 AACWMHGDLKLGAFAAKKI---LQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVM 532
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 298/492 (60%), Gaps = 18/492 (3%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
++ +++ D +V ++ + L I K+F + +V + I G V
Sbjct: 51 IYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCY 110
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGN 228
+ D + ++ +M +L+PD V S L AC L+ G+E+H + + L +
Sbjct: 111 YTDGIHLYYQMINS-SLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRI 169
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
L+++Y KCG +AR +FDEMP ++V+ T M++ Y + G ++D V
Sbjct: 170 KLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHG-------------IKDTVC 216
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
WTAMI+G V+ + A+ +FR MQ + P++ +V +L+ C++LGAL+ G+W+ Y++
Sbjct: 217 WTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMD 276
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
++RI ++ V ALI MY++CG I++A +F +++EK+ ++ S+I G A++GK +A+E
Sbjct: 277 KHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVE 336
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +I G P +TF+GVL+ACSHGGL + G F++M + Y I+P++EHYGC++DLL
Sbjct: 337 LFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLL 396
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GR G L+EA IR + + +++ GALLSAC+I+GN+++ E++A L ++ DS
Sbjct: 397 GRLGRLEEAYSFIRMMKVAPDHVML---GALLSACKIHGNLELAERVAKSLVACKNADSG 453
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+ LL+N Y+S+ +W++ VR M+E G+ K PGCSSIE+N IHEFL+GD H + ++
Sbjct: 454 TYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEK 513
Query: 589 IYSMLDRMAKTL 600
IY L+ + + L
Sbjct: 514 IYKKLEELNQIL 525
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 210/443 (47%), Gaps = 66/443 (14%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q+ I A+I + Q+P + +L+ C++ + ++ YA KIF Q+P + Y LI
Sbjct: 46 NQIPPIYAKIIRNHHHQDPFVVFELLRVCSNLN--SIGYASKIFSHTQNPNVYLYTALID 103
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + L+ ++ + PD++ V KA G +K+G +VH V+K GL
Sbjct: 104 GLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSS 163
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS------------------WNVSISG 163
+ + ++++YG G + +++FDEMP++DVV+ W I G
Sbjct: 164 NRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDG 223
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEF 222
V+ A++VFR M++ ++MP+E T+V LSAC+ L L+LG+ + Y+++ +E
Sbjct: 224 LVRNGESNRALEVFRNMQRE-DVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIEL 282
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD--- 279
+G AL++MY +CG + EA+ +F++M KNVI + SM+ G+ G+ +A +LF
Sbjct: 283 NHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLI 342
Query: 280 -------------------------------RSPVRD------IVLWTAMINGYVQFNRF 302
S +D I + M++ + R
Sbjct: 343 KQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRL 402
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+EA + R M++ PD +L ALL+ C G LE + + + + D+ L
Sbjct: 403 EEAYSFIRMMKV---APDHVMLGALLSACKIHGNLELAERVAKSLVACK-NADSGTYILL 458
Query: 363 IEMYAKCGLIEKALEIFYELREK 385
Y+ G ++A E+ +RE+
Sbjct: 459 SNAYSSSGKWKEAAEVRTNMREE 481
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/512 (36%), Positives = 291/512 (56%), Gaps = 41/512 (8%)
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
DN++ A + + G + H +K L D++V N++++MY + + +
Sbjct: 92 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 151
Query: 147 DEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
D P DVVSWN I+G+++ A+ F +M + + DE T+++ L AC
Sbjct: 152 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKE-QVRLDEVTLLNVLVACARTG 210
Query: 205 NLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+++G H + E +G++L+ MY K
Sbjct: 211 AMKVGSLCHALVVLNGFEINCYIGSSLVSMYAK--------------------------- 243
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
CG +E+AR +F+R P R++V WT+MI G Q RF EAV LFR+MQI +K D
Sbjct: 244 ----CGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDAT 299
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ +++ C Q+GAL+ G+++H Y + + + + V +LI+MY+KCG + KA +IF+ L
Sbjct: 300 IATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLT 359
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAK--PDDITFIGVLSACSHGGLVDEG 441
++D +WT +I G AMNG +AL+LF+QM G K P+++ F+GVL+ACSHGGLV++G
Sbjct: 360 KRDVFTWTVMIMGFAMNGLCVEALDLFAQM-EGEDKVMPNEVIFLGVLTACSHGGLVEQG 418
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
F+ M++VY + P++EHYGC++DLLGRA LL EAE+ I+ +P + ++ + +LL
Sbjct: 419 YHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVV---WRSLLF 475
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
ACR G V + E A +E++E K H LL+N+YA+ RW DV NVR M K
Sbjct: 476 ACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKK 535
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
PGCS IE++G IHEF GD SH E + I + L
Sbjct: 536 PGCSFIEVDGCIHEFFAGDESHFETEAICNTL 567
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 164/344 (47%), Gaps = 46/344 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q A ++ L + LN L+ C +P+ L+ + ++++N +I
Sbjct: 113 SQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDS---APRWASDVVSWNTIIA 169
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + G K+L F ++ + V D T V A G +K G H VV G E
Sbjct: 170 GYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEI 229
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ Y+ +S++ MY G + +++F+ MP+++VV W I+G + RF++AVD+FR M
Sbjct: 230 NCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDM- 288
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-----INQELEFTPIMGNALLDMYCK 236
Q + D+ T+ + +S+C + L+LG+ +H Y + +EL + N+L+DMY K
Sbjct: 289 QIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELS----VKNSLIDMYSK 344
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG +++A ++F + ++V WT M+ G+ G +A DLF + D V+
Sbjct: 345 CGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVM-------- 396
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P++ I + +LT C+ G +EQG
Sbjct: 397 ----------------------PNEVIFLGVLTACSHGGLVEQG 418
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 325/609 (53%), Gaps = 19/609 (3%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ A+I + + +KL+ F T A +F I +YN L+ A+
Sbjct: 43 QLHARIVVFSIAPDNFLASKLISFYTR--QNRFHQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 66 KGSFRKSLLLF-----SKLRERGVS-PDNFTYPFVFKAVG-----WLGEVKKGEKVHGYV 114
+ + + LF S G + PD+ + V KA+ WLG + + +VHG+V
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSGAARPDSISISCVLKALSGCDDFWLGSLAR--QVHGFV 158
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
++ G + D +V N ++ Y I + +K+FDEM D+DVVSWN ISG+ + FED
Sbjct: 159 IRGGSDSDVFVGNGLITYYTKCDNIESARKVFDEMSDRDVVSWNSMISGYSQSGSFEDCK 218
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDM 233
+++ M + P+E TV+S L AC +L G E+H+ I ++ + NA++
Sbjct: 219 KLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG L AR LFDEM K+ + + +++SGY+ G +++A LF + W A+I
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAVI 338
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+G +Q N +E + FREM +P+ L +LL L+ GK IH + N
Sbjct: 339 SGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGSD 398
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ V T++I+ YAK G + A +F +++ WT+II A++G + A LF QM
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHGDSDSACSLFDQM 458
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G KPD++T VLSA +H G D+ + F++M Y I+P +EHY C++ +L RAG
Sbjct: 459 QCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNIEPGVEHYACMVSVLSRAGK 518
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L A E I K+P E I ++GALL+ + G+V++ L ++E +++ +T++
Sbjct: 519 LSNAMEFISKMPIEP---IAKVWGALLNGASVLGDVEIARFACDRLFEMEPENTGNYTIM 575
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
AN+Y A RWE+ VR KMK +G++K+PG S IE N + F+ D S KE+Y ++
Sbjct: 576 ANLYTQAGRWEEAEVVRDKMKRIGLKKIPGTSWIETNKGLRSFIAKDSSCERSKEMYDII 635
Query: 594 DRMAKTLLD 602
+ + +++ D
Sbjct: 636 EGLVESMSD 644
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 335/638 (52%), Gaps = 85/638 (13%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC---LLAYNLLIKA 62
+ A +F G + N N L+ + G A ++F ++ L+++N ++ A
Sbjct: 147 SVHAVVFASGFEWNVFVGNGLV--SMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAA 204
Query: 63 FAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + G +++ +F ++ E G+ PD + V A +G +G++VHGY +++GL
Sbjct: 205 YMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFE 264
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED--------- 172
D +V N+++DMY G + K+F+ M KDVVSWN ++G+ + RF+D
Sbjct: 265 DVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIR 324
Query: 173 --------------------------AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
A+DVFR+MR C P+ T+VS LS C L
Sbjct: 325 EEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRL-CGSEPNVVTLVSLLSGCALAGTL 383
Query: 207 ELGKEIH----RYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMP--NKNVI 256
GKE H ++I E P ++ NAL+DMY KC AR +FD +P +++V+
Sbjct: 384 LHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVV 443
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
WT ++ G G+ +A +LF + +Q + F
Sbjct: 444 TWTVLIGGNAQHGEANEALELFSQ---------------MLQPDNF-------------- 474
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI-TVDAVVATALIEMYAKCGLIEKA 375
+ P+ F + L CA+LGAL G+ IH Y+ NR + VA LI+MY+K G ++ A
Sbjct: 475 VMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAA 534
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F + +++ SWTS++ G M+G+ +AL++F +M G PD +TF+ VL ACSH
Sbjct: 535 RVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHS 594
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
G+VD+G +FN M + + + P EHY C++DLL RAG LDEA ELIR +P + +
Sbjct: 595 GMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAV--- 651
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
+ ALLSACR+Y NV++GE A L ++ES + +TLL+NIYA+A W+DV +R MK
Sbjct: 652 WVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKN 711
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
G++K PGCS ++ F GD SH ++IY +L
Sbjct: 712 TGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLL 749
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 268/508 (52%), Gaps = 36/508 (7%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I Q+ GL +P + + + P+ L ++ S S + +N LI+
Sbjct: 48 IHQQLLVQGLPHDPTHIISMYLTFNSPAKA-LSVLRRLHPS--SHTVFWWNQLIRRSVHL 104
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G L L+ +++ G PD++T+PFV KA G + + G VH V +G E++ +V
Sbjct: 105 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 164
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDK---DVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
N ++ MYG G N +++FDEM ++ D+VSWN ++ +++ A+ +F RM +
Sbjct: 165 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 224
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSE 242
+ PD ++V+ L AC ++ GK++H Y + F + +GNA++DMY KCG + E
Sbjct: 225 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEE 284
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD------IVLWTAMINGY 296
A ++F+ M K+V+ W +MV+GY G+ + A LF++ +R+ +V W+A+I GY
Sbjct: 285 ANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEK--IREEKIELNVVTWSAVIAGY 342
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY-------INE 349
Q EA+ +FR+M++ +P+ LV+LL+GCA G L GK H + ++E
Sbjct: 343 AQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDE 402
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA--SWTSIICGLAMNGKINKAL 407
N D +V ALI+MY+KC + A +F + KD + +WT +I G A +G+ N+AL
Sbjct: 403 NDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEAL 462
Query: 408 ELFSQMISGG--AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----- 460
ELFSQM+ P+ T L AC+ G + GR+ Y ++ + E
Sbjct: 463 ELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQI-----HAYVLRNRFESAMLFV 517
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNEN 488
CLID+ ++G +D A + + N
Sbjct: 518 ANCLIDMYSKSGDVDAARVVFDNMHQRN 545
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 185/493 (37%), Positives = 299/493 (60%), Gaps = 15/493 (3%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK-ICNVKKLFDEMPDKDVVSWNVSIS 162
+++ +++H +++ +GL ++ +Y + + + LFD + +N
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFR 60
Query: 163 GHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
+ A+ + R M R G PD T L AC+AL +L G+E+H Q L+
Sbjct: 61 VYAASPTPLHALLLHRHMFRHGPP--PDTYTFPFLLKACSALAHLLKGQELH---CQALK 115
Query: 222 F----TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
F + N+L+ +Y + AR +FD M +++ WT++++ Y N +E AR +
Sbjct: 116 FGLGGHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKV 175
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FD P R +V ++AM+ YV+ NRF EA+ LFRE+ ++++P ++++L CA LGAL
Sbjct: 176 FDEMPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGAL 235
Query: 338 EQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ G+W++ ++ ++ VD+ +ATALI+M+ KCG IE AL +F +EK WT+++ G
Sbjct: 236 DVGRWVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSG 295
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
LAM+G + +E F +M+ G KPD++TF+ +LS CSH GLV+EG +F+ M + ++P
Sbjct: 296 LAMHGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEP 355
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
+EH+GC++DLLGRAGL+D+A +LI ++P E N I +GALL+ACR+Y NV++GE A
Sbjct: 356 TVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAI---WGALLNACRVYKNVEVGELAA 412
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
L K E + + + L ++Y A RW++V V+ KMKE+G RK PGCS IE+ GI +EF
Sbjct: 413 QWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEF 472
Query: 577 LVGDPSHSEMKEI 589
+VGD SH EI
Sbjct: 473 VVGDKSHPCAVEI 485
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 231/489 (47%), Gaps = 75/489 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M + K++ A + GL Q L KL+ T S +L +A +F ++ P YN +
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSS-SSLHHARLLFDAVYHPSTYLYNTMF 59
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ +A + +LLL + G PD +T+PF+ KA L + KG+++H +K GL
Sbjct: 60 RVYAASPTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLG 119
Query: 121 FDTYVCNSIMDMYGVLGKI----------------------------CNV---KKLFDEM 149
+V NS++ +YG ++ C+V +K+FDEM
Sbjct: 120 GHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEM 179
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P++ VVS++ ++ +V+ RF +A+++FR + + P + V+S L AC L L++G
Sbjct: 180 PERSVVSYSAMLAAYVRGNRFREALELFRELFS-VKIEPSDSCVMSVLCACANLGALDVG 238
Query: 210 KEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
+ ++ ++ ++ + AL+DM+ KCG + A +F+ K+V WT+M+SG
Sbjct: 239 RWVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAM 298
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G E+ + F++ M++ + KPD+ VAL
Sbjct: 299 HGLGEQLIEAFEK-----------MVDSGI--------------------KPDEVTFVAL 327
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELR-E 384
L+GC+ G + +G + + E+ V+ V ++++ + GLI++A+++ E+ E
Sbjct: 328 LSGCSHSGLVNEGLYYFDRM-ESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFE 386
Query: 385 KDAASWTSII--CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+AA W +++ C + N ++ EL +Q + + ++ +LS G DE
Sbjct: 387 PNAAIWGALLNACRVYKNVEVG---ELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVE 443
Query: 443 RFFNTMTEV 451
+ M EV
Sbjct: 444 KVKLKMKEV 452
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 323/600 (53%), Gaps = 39/600 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ I + G + N L+ F + + + A K+F + ++++N +I +
Sbjct: 64 EQLHGFILKSGFGERNSVGNSLVAF--YLKNQRVDSARKVFDEMTERDVISWNSIINGYV 121
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G K L +F ++ G+ D T VF + G VH VK +
Sbjct: 122 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 181
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
CN+++DMY G + + K +F EM D+ VVS+ I+G+ + +AV +F M +
Sbjct: 182 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE- 240
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD TV + L+ C + L+ GK +H +I + +L F + NAL+DMY KCG + EA
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+F EM K++I W +++ GY N Y +
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSK--------------------------NCYA-----N 329
Query: 304 EAVALFR-EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA++LF ++ R PD+ + +L CA L A ++G+ IHGYI N D VA +L
Sbjct: 330 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 389
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++MYAKCG + A +F ++ KD SWT +I G M+G +A+ LF+QM G + D+
Sbjct: 390 VDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 449
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
I+F+ +L ACSH GLVDEG RFFN M +I+P +EHY C++D+L R G L +A I
Sbjct: 450 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 509
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + I +GALL CRI+ +V + EK+A + ++E +++ ++ L+ANIYA A +
Sbjct: 510 NMPIPPDATI---WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 566
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
WE V +R+++ + G+RK PGCS IEI G ++ F+ GD S+ E + I + L ++ +++
Sbjct: 567 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 626
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 316/597 (52%), Gaps = 38/597 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A + ++G +++ T N L+ + G + A IF + ++++N LI
Sbjct: 129 RQVHAMVVRMGYEKDVFTANALVDM--YVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 186
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G +++ L +++ G+ P+ F + KA G G ++HG+++K + D Y
Sbjct: 187 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 246
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++DMY + + K+FD M +D++ WN ISG R ++A +F +R+
Sbjct: 247 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKE- 305
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEA 243
L + T+ + L + +L+ +++H + F + N L+D Y KC CLS+A
Sbjct: 306 GLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA 365
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+F+E + DI+ T+MI Q + +
Sbjct: 366 IRVFEECSSG-------------------------------DIIAVTSMITALSQCDHGE 394
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ LF EM L+PD F+L +LL CA L A EQGK +H ++ + + DA AL+
Sbjct: 395 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 454
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
YAKCG IE A F L E+ SW+++I GLA +G +ALELF +M+ G P+ I
Sbjct: 455 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 514
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T VL AC+H GLVDE +R+FN+M E++ I EHY C+IDLLGRAG LD+A EL+
Sbjct: 515 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 574
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + N ++GALL A R++ + ++G+ A L +E + S H LLAN YAS+ W
Sbjct: 575 MPFQAN---ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMW 631
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+V VR+ MK+ ++K P S +E+ +H F+VGD SH KEIYS LD + +
Sbjct: 632 NEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLM 688
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 215/482 (44%), Gaps = 37/482 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP-CLLAYNLLIKAFA 64
Q+ A G + N L+ + G + A ++F S +++N L+ A+
Sbjct: 28 QVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K ++ +F ++ G+ P F + V A + G +VH VV+ G E D +
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
N+++DMY +G++ +F++MPD DVVSWN ISG V A+++ +M+
Sbjct: 146 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSS- 204
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
L+P+ + S L AC +LG++IH + I + +G L+DMY K L +A
Sbjct: 205 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 264
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++FD M + RD++LW A+I+G R D
Sbjct: 265 MKVFDWMSH-------------------------------RDLILWNALISGCSHGGRHD 293
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA ++F ++ L ++ L A+L A L A + +H + DA V LI
Sbjct: 294 EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI 353
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ Y KC + A+ +F E D + TS+I L+ A++LF +M+ G +PD
Sbjct: 354 DSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 413
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+L+AC+ ++G++ + + Q L+ + G +++AE
Sbjct: 414 VLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 472
Query: 484 IP 485
+P
Sbjct: 473 LP 474
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 187/400 (46%), Gaps = 47/400 (11%)
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
+R GV + F P V K V + + G +VH + TG D +V N+++ MYG G
Sbjct: 1 MRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 139 ICNVKKLFDEM-PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
+ + +++FDE +++ VSWN +S +VK + DA+ VF M + P E +
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS-GIQPTEFGFSCVV 116
Query: 198 SACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
+ACT +N++ G+++H + E NAL+DMY K G + A +F++MP+ +V+
Sbjct: 117 NACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVV 176
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
W +++SG V +NG+ A+ L +M+
Sbjct: 177 SWNALISGCV--------------------------LNGHDH-----RAIELLLQMKSSG 205
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
L P+ F+L ++L CA GA + G+ IHG++ + D + L++MYAK ++ A+
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM 265
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F + +D W ++I G + G+ ++A +F + G + T VL + +
Sbjct: 266 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTAS-- 323
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
+ Q+ E G + D GL+D
Sbjct: 324 --------LEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 6/259 (2%)
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRS-PVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+V ++V+ Y G ++ AR +FD + R+ V W +++ YV+ ++ +A+ +F E
Sbjct: 40 SDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 99
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M ++P +F ++ C ++ G+ +H + D A AL++MY K G
Sbjct: 100 MVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGR 159
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
++ A IF ++ + D SW ++I G +NG ++A+EL QM S G P+ +L A
Sbjct: 160 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKA 219
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
C+ G D GR+ M + G L+D+ + LD+A ++ + + +
Sbjct: 220 CAGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHRD--- 275
Query: 492 IVPLYGALLSACRIYGNVD 510
+ L+ AL+S C G D
Sbjct: 276 -LILWNALISGCSHGGRHD 293
>gi|357478647|ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510664|gb|AES91806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 576
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 326/571 (57%), Gaps = 21/571 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYNLLIKAF 63
KQI AQI L ++ C ++ + Y I +++P ++ +I+ F
Sbjct: 20 KQIHAQIITNNLTHLEPIFIHRILLCDITNYKTISNYILSILHHLRNPDSFSWGCVIRFF 79
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
++KG F +++ L+ ++R G+ P + + K+ + + G +HG+V K G +
Sbjct: 80 SQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIHGHVHKFGFDACV 139
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YV +++D+Y +G + +K+FDEMPDK+VVSWN +SG++K ++ F
Sbjct: 140 YVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFF------ 193
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHR--YINQEL-EFTPIMGNALLDMYCKCGCL 240
DE + +S + ++ R Y+ Q++ E N ++ Y CG +
Sbjct: 194 -----DEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSI 248
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
EARELFD MP +N + +M++GY G + AR+LFD+ +D++ + AMI Y Q +
Sbjct: 249 VEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSS 308
Query: 301 RFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ EA+ LF M L PDK L ++++ C+QLG LE +WI IN I +D +
Sbjct: 309 KPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHL 368
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ATALI++YAKCG I+KA E+F+ LR++D +++++I G +NG+ + A+ELF +M
Sbjct: 369 ATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECI 428
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P+ +T+ G+L+A +H GL +EG R F +M + I P ++HYG ++DLLGRAG LDEA
Sbjct: 429 IPNLVTYTGILTAYNHAGLAEEGYRCFISMKD-NGIVPSVDHYGIMVDLLGRAGWLDEAY 487
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
+LI K+P + N V ++GALL ACR++ N+ +GE K+ES+ + +++LL+ IYA
Sbjct: 488 KLIMKMPMQPN---VGVWGALLLACRLHDNLKLGEIAVQHCIKLESETAGYYSLLSGIYA 544
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+ +W D + ++ + K+PGCS ++
Sbjct: 545 TVGKWNDAKKLTTGVEGKKIIKIPGCSWTQL 575
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 316/592 (53%), Gaps = 36/592 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K+ AQ+ ++G + L+ + G++ A ++F + + +N++I +A
Sbjct: 182 KEFHAQVIKVGFVSDFRIGTALV--SMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K G K+ LF ++++ G P+ ++ + + G+ VH + TGL D
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V +++ MY G I +++FD+M +DVVSW V I G+ + EDA +F M++
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEE- 358
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
+ PD T + ++AC + +L L +EIH + R
Sbjct: 359 GIQPDRITYIHIINACASSADLSLAREIHSQV--------------------------VR 392
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
F +++ T++V Y CG ++ AR +FD RD+V W+AMI YV+ +E
Sbjct: 393 AGF----GTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEE 448
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A F M+ ++PD + LL C LGAL+ G I+ + + V ALI
Sbjct: 449 AFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALIN 508
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
M K G IE+A IF + ++D +W +I G +++G +AL+LF +M+ +P+ +T
Sbjct: 509 MNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVT 568
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+GVLSACS G V+EGRRFF+ + + I P +E YGC++DLLGRAG LDEAE LI ++
Sbjct: 569 FVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRM 628
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P + N I + LL+ACRIYGN+D+ E+ A E D + + L+++YA+A WE
Sbjct: 629 PLKPNSSI---WSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWE 685
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+V VR+ M+ GVRK GC+ IE+ G +H F+V D SH + EIY+ L R+
Sbjct: 686 NVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARL 737
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 213/443 (48%), Gaps = 35/443 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ++ I Q G Q N LN L+ H GN+L A + F S+++ ++ +N +I +A
Sbjct: 81 KQVRDHIIQSGRQLNIYELNTLIKL--HSICGNMLEARQTFDSVENKTVVTWNAIIAGYA 138
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G +++ LF ++ + + P T+ V A +K G++ H V+K G D
Sbjct: 139 QLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFR 198
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ +++ MY G + +++FD + +DV ++NV I G+ K E A +F RM+Q
Sbjct: 199 IGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQE- 257
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
P+ + +S L C+ + L GK +H + +N L + AL+ MY CG + A
Sbjct: 258 GFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGA 317
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R +FD+M ++V+ WT M+ GY +E
Sbjct: 318 RRVFDKMKVRDVVSWTVMIRGYAENSNIE------------------------------- 346
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
+A LF MQ ++PD+ + ++ CA L + IH + D +V TAL+
Sbjct: 347 DAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALV 406
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKCG I+ A ++F + +D SW+++I NG +A E F M +PD +
Sbjct: 407 HMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466
Query: 424 TFIGVLSACSHGGLVDEGRRFFN 446
T+I +L+AC H G +D G +
Sbjct: 467 TYINLLNACGHLGALDLGMEIYT 489
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 244/561 (43%), Gaps = 86/561 (15%)
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
+ +L E D+ TY +F+ L + G++V +++++G + + Y N+++ ++
Sbjct: 48 VLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHS 107
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
+ G + ++ FD + +K VV+WN I+G+ + ++A +FR+M + P T +
Sbjct: 108 ICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEA-MEPSIITFL 166
Query: 195 STLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L AC++ L+LGKE H + K G +S+ R
Sbjct: 167 IVLDACSSPAGLKLGKEFHAQV------------------IKVGFVSDFR---------- 198
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
T++VS YV G ++ AR +FD RD+ + MI GY + ++A LF MQ
Sbjct: 199 --IGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQ 256
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
KP++ +++L GC+ AL GK +H + D VATALI MY CG IE
Sbjct: 257 EGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEG 316
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
A +F +++ +D SWT +I G A N I A LF+ M G +PD IT+I +++AC+
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376
Query: 435 G-----------------------------------GLVDEGRRFFNTMTEVYQIQPKLE 459
G + + R+ F+ M+ + +
Sbjct: 377 SADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS-----RRDVV 431
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ +I G +EA E + N E V Y LL+AC G +D+G ++
Sbjct: 432 SWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQA 491
Query: 520 EKIESKDSSFHTLLANIYASAN-RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
K D H + N + N + + R + M R V + ++
Sbjct: 492 IK---ADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDV----------VTWNVMI 538
Query: 579 GDPS-HSEMKEIYSMLDRMAK 598
G S H +E + DRM K
Sbjct: 539 GGYSLHGNAREALDLFDRMLK 559
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 322/564 (57%), Gaps = 5/564 (0%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +IF + +++N LI F++ G + L +F ++ +G SP+ TY V A
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
++K G +H +++ D N ++DMY G + K++F + + D +SWN
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSL 350
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
I+G V EDA+ +F +MR+ +++ DE + + L C+ G+ +H Y I
Sbjct: 351 ITGVVHFGLGEDALILFNQMRRS-SVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG 409
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ + +GNA++ MY KCG +A +F MP +N I WT+M++ + G + KAR FD
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFD 469
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P R+IV W +M++ YVQ +E + L+ M+ ++PD + CA L ++
Sbjct: 470 MMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKL 529
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G + + + ++++ VA +++ MY++CGLI++A F + +KD SW +++ A
Sbjct: 530 GMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQ 589
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
NG K ++ F M+ KP+ I+++ VLS CSH GLV EG+ +F++MT V+ I P E
Sbjct: 590 NGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNE 649
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
H+ C++DLLGRAGLL++A++LI +P + N + + ALL +CR++ ++ + E A L
Sbjct: 650 HFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATV---WSALLGSCRVHHDLRLAETAAKKL 706
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+++ + S + LL+N+Y+ + ++V ++R+ MK G+R GCS IE++ +H F V
Sbjct: 707 MELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVD 766
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDS 603
+ SH ++KE+Y L+ M K + D+
Sbjct: 767 ETSHPQIKEVYLKLEEMMKMIEDT 790
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 139/550 (25%), Positives = 233/550 (42%), Gaps = 108/550 (19%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS--IQSPCLLAYNLLIKAFAKKG 67
Q+FQ +N T N ++ S + AEK+F ++ +++ +I +++ G
Sbjct: 64 QVFQETHHRNIFTWNTMIRALV--SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNG 121
Query: 68 SFRKSLLLFSKL----RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+S FS + + G + D F++ V KA G LG+ + ++H V K G +T
Sbjct: 122 FHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMET 181
Query: 124 YVCNSIMDMYGVLGKI----------------C---------------NVKKLFDEMPDK 152
+ NS++ MY G + C ++F+ MP++
Sbjct: 182 CIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPER 241
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN--LMPDEGTVVSTLSACTALKNLELGK 210
D VSWN IS + + +F M CN P+ T S LSAC + +L+ G
Sbjct: 242 DEVSWNTLISIFSQHGFGVQCLAMFVEM---CNQGFSPNFMTYGSVLSACASTSDLKWGA 298
Query: 211 EIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+H R + E + GN L+DMY KCGCL A+ +F + + I W S+++G V+ G
Sbjct: 299 HLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFG 358
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
E A LF++ +VL D+FIL +L
Sbjct: 359 LGEDALILFNQMRRSSVVL-------------------------------DEFILPTILG 387
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
C+ G+ +HGY ++ + A V A+I MYAKCG +KA +F + ++ S
Sbjct: 388 VCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTIS 447
Query: 390 WTSIICGLAMNGKINKA-------------------------------LELFSQMISGGA 418
WT++I + +G I KA L+L+ M S G
Sbjct: 448 WTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGV 507
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PD ITF + AC+ +V G + T+ + + + ++ + R GL+ EA+
Sbjct: 508 QPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAK 566
Query: 479 ELIRKIPNEN 488
I +++
Sbjct: 567 NTFDSIDDKD 576
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 168/362 (46%), Gaps = 15/362 (4%)
Query: 138 KICNVKKLFDEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN---LMPDEGT 192
++ + +KLFDEMP KD VSW ISG+ + + + F M + N D +
Sbjct: 89 RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFS 148
Query: 193 VVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
S + AC +L + L ++H +++ + N+++ MY KCG + A +F ++
Sbjct: 149 FTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIE 208
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
++ CW SM+ GY KA +F+R P RD V W +I+ + Q + +A+F E
Sbjct: 209 RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVE 268
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M P+ ++L+ CA L+ G +H I ++D V LI+MYAKCG
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
++ A +F LRE D SW S+I G+ G AL LF+QM D+ +L
Sbjct: 329 LDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGV 388
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG----CLIDLLGRAGLLDEAEELIRKIPNE 487
CS G + Y I+ + +I + + G D+A+ + R +P
Sbjct: 389 CSGPDYASTGE-----LLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR 443
Query: 488 NN 489
N
Sbjct: 444 NT 445
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 42/296 (14%)
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR--DIVLWT 290
MY CG +A ++F E ++N+ W +M+ V+ ++ A LFD PVR D V WT
Sbjct: 52 MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111
Query: 291 AMINGYVQ----FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
MI+GY Q F+ + R+ D F +++ C LG +H
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHAL 171
Query: 347 INENRITVDAVVATALIEMYAKCGLIE-------------------------------KA 375
+++ ++ + +++ MY KCG ++ KA
Sbjct: 172 VSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKA 231
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
L+IF + E+D SW ++I + +G + L +F +M + G P+ +T+ VLSAC+
Sbjct: 232 LQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAST 291
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEH-YG-CLIDLLGRAGLLDEAEELIRKIPNENN 489
+ G + +++ L+ +G LID+ + G LD A+ + + + ++
Sbjct: 292 SDLKWGAHLH---ARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDH 344
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A F + ++ +N ++ + + G + L L+ +R GV PD T+
Sbjct: 459 GDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSI 518
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+A L VK G +V + K GL + V NSI+ MY G I K FD + DKD++
Sbjct: 519 RACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLI 578
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
SWN ++ + +D F M + C P+ + VS LS C+ + + GK
Sbjct: 579 SWNAMLAAFAQNGLGIKVIDTFEDMLKTECK--PNHISYVSVLSGCSHMGLVAEGKHYFD 636
Query: 215 YINQELEFTPI--MGNALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMV 262
+ + +P + ++D+ + G L +A++L + MP K N W++++
Sbjct: 637 SMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALL 687
>gi|195651797|gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 303/543 (55%), Gaps = 31/543 (5%)
Query: 39 LYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
L+A + S P A+ L+K +A + R++ L++++ R P + KA
Sbjct: 8 LHAIYMTSSSHDPDKWAH--LVKEYASQSLLREAALVYARNLPRRTHHQPL-LPVLLKAA 64
Query: 99 GWLG--EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
E+ G+ +H +K+ D V +I+ MY G + + ++ FDEMPD++V+S
Sbjct: 65 AASSPTELGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVIS 124
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
+N ++G+ + A+ +F MR ++ T + + ++ E R+
Sbjct: 125 YNALLAGYAVAGDMDGALALFGGMRSWTHV-----TWATLIRGFAEKGDM---AEARRW- 175
Query: 217 NQELEFTP------IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
E TP + L+ Y G + ARE+FD MP +N W+SMV+GY G
Sbjct: 176 ---FEATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKAGD 232
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
E+AR +FDR P R++V W A+I GY Q ++A+ F M R+KPD+F + +LL+
Sbjct: 233 AEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEFTMASLLSA 292
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CAQLG+LEQGK +H +IN+ I + V LI+MYAKCG + A IF +R K+ W
Sbjct: 293 CAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECW 352
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I LA +G+ ++AL LF QM G KP+ IT + VL AC+HGG VDEG + FN + +
Sbjct: 353 NTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQIFNKL-D 411
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
Y + +EHYGCL+DLLGRAG L EA E++ + E NE+I +G+LL ACR++ + +
Sbjct: 412 AYGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVI---WGSLLGACRVHRDAE 468
Query: 511 MG----EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
M E++ L S + + + +LANI A++ RWE +R+KM GV K PGCSS
Sbjct: 469 MSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRGVEKTPGCSS 528
Query: 567 IEI 569
+E+
Sbjct: 529 LEL 531
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 188/407 (46%), Gaps = 65/407 (15%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +FG ++S + + LI+ FA+KG ++ F T P +
Sbjct: 136 GDMDGALALFGGMRSWTHVTWATLIRGFAEKGDMAEARRWFEA-----------TPPGMR 184
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLE-----FD------TYVCNSIMDMYGVLGKICNVKK 144
V W V GYV +E FD +V +S++ Y G +
Sbjct: 185 TVVTWT------VLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKAGDAEEARA 238
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+FD +P +++V+WN I+G+ + E A++ F M Q + PDE T+ S LSAC L
Sbjct: 239 VFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQE-RVKPDEFTMASLLSACAQLG 297
Query: 205 NLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+LE GK++H +INQE + + N L+DMY KCG L+ AR +FD M KN CW +M+S
Sbjct: 298 SLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECWNTMIS 357
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
+ GQ DEA+ LF +M+ KP+
Sbjct: 358 ALASHGQ-------------------------------SDEALHLFFQMERSGRKPNTIT 386
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
++A+L C G +++G I ++ + L+++ + G +++A EI +
Sbjct: 387 VLAVLGACTHGGFVDEGLQIFNKLDAYGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNMS 446
Query: 384 EK-DAASWTSII--CGLAMNGKINKAL-ELFSQMISGGAKPDDITFI 426
E+ + W S++ C + + ++++ + E ++ S A +D +I
Sbjct: 447 EEPNEVIWGSLLGACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYI 493
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 343/638 (53%), Gaps = 46/638 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q A+I + G Q + KL+ ++ ++ A+ + SI P + +++ LI A K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIA--SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
F +S+ +FS++ G+ PD+ P +FK L K G+++H +GL+ D +V
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVV------------------------------ 155
S+ MY G++ + +K+FD M DKDVV
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 156 -----SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
SWN +SG + ++AV +F+++ PD+ TV S L + + L +G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHH-LGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 211 EIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH Y I Q L + +A++DMY K G + LF++ + ++G G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 270 QLEKARDLFD----RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
++KA ++F+ ++ ++V WT++I G Q + EA+ LFREMQ+ +KP+ +
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L C + AL G+ HG+ + + V +ALI+MYAKCG I + +F + K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ W S++ G +M+GK + + +F ++ KPD I+F +LSAC GL DEG ++F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
M+E Y I+P+LEHY C+++LLGRAG L EA +LI+++P E + + +GALL++CR+
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV---WGALLNSCRL 569
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
NVD+ E A L +E ++ + LL+NIYA+ W +V ++R KM+ +G++K PGCS
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
I++ ++ L GD SH ++ +I +D ++K + S
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 198/424 (46%), Gaps = 44/424 (10%)
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
K + H ++K+G + D Y+ ++ Y + + +PD + S++ I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
K F ++ VF RM L+PD + + C L ++GK+IH L+
Sbjct: 93 KAKLFTQSIGVFSRMFSH-GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF---DRS 281
+ ++ MY +CG + +AR++FD M +K+V+ ++++ Y G LE+ + + S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 282 PVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
+ +IV W +++G+ + EAV +F+++ + PD+ + ++L L G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKC------------------------------- 369
+ IHGY+ + + D V +A+I+MY K
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 370 GLIEKALEIFYELREK----DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
GL++KALE+F +E+ + SWTSII G A NGK +ALELF +M G KP+ +T
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAEELIRKI 484
+L AC + + GR V+ + H G LID+ + G ++ ++ + +
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 485 PNEN 488
P +N
Sbjct: 450 PTKN 453
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 343/638 (53%), Gaps = 46/638 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q A+I + G Q + KL+ ++ ++ A+ + SI P + +++ LI A K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIA--SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
F +S+ +FS++ G+ PD+ P +FK L K G+++H +GL+ D +V
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVV------------------------------ 155
S+ MY G++ + +K+FD M DKDVV
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 156 -----SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
SWN +SG + ++AV +F+++ PD+ TV S L + + L +G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHH-LGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 211 EIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH Y I Q L + +A++DMY K G + LF++ + ++G G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 270 QLEKARDLFD----RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
++KA ++F+ ++ ++V WT++I G Q + EA+ LFREMQ+ +KP+ +
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L C + AL G+ HG+ + + V +ALI+MYAKCG I + +F + K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ W S++ G +M+GK + + +F ++ KPD I+F +LSAC GL DEG ++F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
M+E Y I+P+LEHY C+++LLGRAG L EA +LI+++P E + + +GALL++CR+
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV---WGALLNSCRL 569
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
NVD+ E A L +E ++ + LL+NIYA+ W +V ++R KM+ +G++K PGCS
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
I++ ++ L GD SH ++ +I +D ++K + S
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 198/424 (46%), Gaps = 44/424 (10%)
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
K + H ++K+G + D Y+ ++ Y + + +PD + S++ I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
K F ++ VF RM L+PD + + C L ++GK+IH L+
Sbjct: 93 KAKLFTQSIGVFSRMFSH-GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF---DRS 281
+ ++ MY +CG + +AR++FD M +K+V+ ++++ Y G LE+ + + S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 282 PVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
+ +IV W +++G+ + EAV +F+++ + PD+ + ++L L G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKC------------------------------- 369
+ IHGY+ + + D V +A+I+MY K
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 370 GLIEKALEIFYELREK----DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
GL++KALE+F +E+ + SWTSII G A NGK +ALELF +M G KP+ +T
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAEELIRKI 484
+L AC + + GR V+ + H G LID+ + G ++ ++ + +
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 485 PNEN 488
P +N
Sbjct: 450 PTKN 453
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 316/597 (52%), Gaps = 38/597 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A + ++G +++ T N L+ + G + A IF + ++++N LI
Sbjct: 222 RQVHAMVVRMGYEKDVFTANALVDM--YVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G +++ L +++ G+ P+ F + KA G G ++HG+++K + D Y
Sbjct: 280 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++DMY + + K+FD M +D++ WN ISG R ++A +F +R+
Sbjct: 340 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKE- 398
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEA 243
L + T+ + L + +L+ +++H + F + N L+D Y KC CLS+A
Sbjct: 399 GLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+F+E + DI+ T+MI Q + +
Sbjct: 459 IRVFEECSSG-------------------------------DIIAVTSMITALSQCDHGE 487
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ LF EM L+PD F+L +LL CA L A EQGK +H ++ + + DA AL+
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
YAKCG IE A F L E+ SW+++I GLA +G +ALELF +M+ G P+ I
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T VL AC+H GLVDE +R+FN+M E++ I EHY C+IDLLGRAG LD+A EL+
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + N ++GALL A R++ + ++G+ A L +E + S H LLAN YAS+ W
Sbjct: 668 MPFQAN---ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMW 724
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+V VR+ MK+ ++K P S +E+ +H F+VGD SH KEIYS LD + +
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLM 781
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 208/438 (47%), Gaps = 47/438 (10%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F I PC ++++ L+ A++ G R ++ F +R GV + F P V K V
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCV-- 113
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM-PDKDVVSWNV 159
+ + G +VH + TG D +V N+++ MYG G + + +++FDE +++ VSWN
Sbjct: 114 -PDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 172
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQ 218
+S +VK + DA+ VF M + P E ++ACT +N++ G+++H +
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRM 231
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
E NAL+DMY K G + A +F++MP+ +V+ W +++SG V
Sbjct: 232 GYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV------------ 279
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+NG+ A+ L +M+ L P+ F+L ++L CA GA +
Sbjct: 280 --------------LNGHDH-----RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD 320
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ IHG++ + D + L++MYAK ++ A+++F + +D W ++I G +
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCS 380
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
G+ ++A +F + G + T VL + + + Q+
Sbjct: 381 HGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTAS----------LEAASATRQVHALA 430
Query: 459 EHYGCLIDLLGRAGLLDE 476
E G + D GL+D
Sbjct: 431 EKIGFIFDAHVVNGLIDS 448
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 215/482 (44%), Gaps = 37/482 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP-CLLAYNLLIKAFA 64
Q+ A G + N L+ + G + A ++F S +++N L+ A+
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 178
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K ++ +F ++ G+ P F + V A + G +VH VV+ G E D +
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 238
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
N+++DMY +G++ +F++MPD DVVSWN ISG V A+++ +M+
Sbjct: 239 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSS- 297
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
L+P+ + S L AC +LG++IH + I + +G L+DMY K L +A
Sbjct: 298 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++FD M + RD++LW A+I+G R D
Sbjct: 358 MKVFDWMSH-------------------------------RDLILWNALISGCSHGGRHD 386
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA ++F ++ L ++ L A+L A L A + +H + DA V LI
Sbjct: 387 EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI 446
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ Y KC + A+ +F E D + TS+I L+ A++LF +M+ G +PD
Sbjct: 447 DSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+L+AC+ ++G++ + + Q L+ + G +++AE
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 484 IP 485
+P
Sbjct: 566 LP 567
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 180/408 (44%), Gaps = 48/408 (11%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G +H ++K+G F + N ++ Y + C +++FDE+PD VSW+ ++ +
Sbjct: 23 GAHLHANLLKSG--FLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK---NLELGKEIHRY-INQELEF 222
A+ F MR EG + + LK + +LG ++H +
Sbjct: 81 NGLPRSAIQAFHGMRA-------EGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGS 133
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ MY G + +AR +FDE ++
Sbjct: 134 DVFVANALVAMYGGFGFMDDARRVFDEAGSE----------------------------- 164
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R+ V W +++ YV+ ++ +A+ +F EM ++P +F ++ C ++ G+
Sbjct: 165 -RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ 223
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H + D A AL++MY K G ++ A IF ++ + D SW ++I G +NG
Sbjct: 224 VHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 283
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
++A+EL QM S G P+ +L AC+ G D GR+ M + G
Sbjct: 284 DHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG 343
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
L+D+ + LD+A ++ + + + + L+ AL+S C G D
Sbjct: 344 -LVDMYAKNHFLDDAMKVFDWMSHRD----LILWNALISGCSHGGRHD 386
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 310/532 (58%), Gaps = 31/532 (5%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSI 161
+K+ +++H + + L +Y+ + I+ + G + LF MP+ ++ +N I
Sbjct: 37 MKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNPNIFDYNSII 96
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
+ + +F+ ++ VF +M N+ P+ T + + +C L +LE Q
Sbjct: 97 TSYTTNSQFDKSLSVFTKMLN-MNIRPNSHTFTTLVKSCVTLSSLE----------QVFT 145
Query: 222 FTPIMGNA--------LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
T GN+ +++++ K G + AR++FDE N+NV+CWTS+VSGY +CG + +
Sbjct: 146 LTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNE 205
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI-----IRLKPDKFILVALL 328
RD+FD+ P R+ +AM++GYV+ + F E V LFRE++ R+K + +LV++L
Sbjct: 206 VRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVL 265
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
C +GA E+GKWIH Y+ EN + D + TALI+ YAKCG ++ A ++F ++ KD A
Sbjct: 266 NACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVA 325
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+W+++I GLA+NG ALELF +M G KP+++TF+GVL+AC+H L E R F M
Sbjct: 326 TWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIM 385
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+E Y I P +EHYGC++D+L R+G + +A I + E + I +G+LL+ C ++G+
Sbjct: 386 SEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAI---WGSLLNGCLMHGH 442
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
++G+K+ L + + + S + LLAN+YA+ +WE V+ VR+ MK+ GV V G S IE
Sbjct: 443 YELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSFIE 502
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL--LDSKQNAMEGDNLVAINF 618
I+ +H+F D EIY +L + K + ++++ D + A+ F
Sbjct: 503 IDQTLHKFSADDKCCLYSGEIYEVLSHLGKKVEEFSGDKDSVCFDIITAVRF 554
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 205/460 (44%), Gaps = 78/460 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M Q KQI A L + ++++ F G+ YAE +F + +P + YN +I
Sbjct: 37 MKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNPNIFDYNSII 96
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
++ F KSL +F+K+ + P++ T+ + K+ L + E+V +K+G
Sbjct: 97 TSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSL---EQVFTLTMKSGNS 153
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y +S+++++ G I +++FDE +++VV W +SG+ C + DVF +M
Sbjct: 154 SDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKM 213
Query: 181 RQ---------------------GCNLM-----PDEGT---------VVSTLSACTALKN 205
Q G L D+G +VS L+ACT +
Sbjct: 214 PQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGA 273
Query: 206 LELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
E GK IH Y+ + LE+ +G AL+D Y KCG + +A ++FD+M K+V W++M+ G
Sbjct: 274 FEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILG 333
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
ING + A+ LF +M+ + KP++
Sbjct: 334 LA--------------------------INGNNKM-----ALELFEKMEKVGPKPNEVTF 362
Query: 325 VALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
V +LT C + + G ++E IT ++++ A+ G ++KAL +
Sbjct: 363 VGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMH 422
Query: 384 -EKDAASWTSIICGLAMNG------KINKALELFSQMISG 416
E D A W S++ G M+G K+ K L F SG
Sbjct: 423 IEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFDPEHSG 462
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 175/454 (38%), Positives = 283/454 (62%), Gaps = 12/454 (2%)
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
FD + + +NV I H A+ F +MR+ ++ PD + L AC L+
Sbjct: 94 FDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRR-FSVPPDFHSYPFALKACAHLRV 152
Query: 206 LELGKEIHRYINQELEFTPIMG----NALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L L + +H +Q +F + N+L+ +Y CL+ A ++FDE +++V+ + ++
Sbjct: 153 LSLAQCLH---SQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNAL 209
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
V G+V G+ KAR++FD P+RD V W ++I GY Q + +EA+ LF M ++L+PD
Sbjct: 210 VDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEPDN 269
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
LV+ L+ CAQLG LE+GK IH YI +NRI D+ ++T L++ YAK G I+ A+++F
Sbjct: 270 IALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTAIKVFEL 329
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+K +W +++ G+AM+G + L FS+M+ G KPD I+F+GVL CSHGGLVDE
Sbjct: 330 SPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGGLVDEA 389
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
++ F+ M +Y ++ +L+HYGC+ DLL RAGL+ EA EL + +P + + ++ LL
Sbjct: 390 KKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGD---IFVWSGLLG 446
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE-MGVRK 560
CRI+GN+++ E+ A + +++ +D +++LAN+YA+A+RWEDV +R+ M V+K
Sbjct: 447 GCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRAVKK 506
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
G SSI++ G+ HEFL G+ H++ EIY +LD
Sbjct: 507 NAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVLD 540
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 204/465 (43%), Gaps = 76/465 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQ-----NPETLNKLMVFCT-----HPSHGNLLYAEKIFGSIQS 50
+ QL Q+ AQ F GL +P+ L K++ T S L YA F +IQ+
Sbjct: 40 INQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSLLHYAVSTFDNIQN 99
Query: 51 PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
P YN++I+ S +L F ++R V PD +YPF KA L + + +
Sbjct: 100 PSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKACAHLRVLSLAQCL 159
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
H V K G D YV NS++ +Y + + ++FDE D+DVVS+N + G VK F
Sbjct: 160 HSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNALVDGFVKAGEF 219
Query: 171 EDAVDVFRRM---------------RQG--CN-------------LMPDEGTVVSTLSAC 200
A ++F M QG CN L PD +VS LSAC
Sbjct: 220 VKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEPDNIALVSALSAC 279
Query: 201 TALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
L LE GK+IH YI + ++ + L+D Y K GC+ A ++F+ P+K++I W
Sbjct: 280 AQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTAIKVFELSPDKSLITWN 339
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
+M+ G G N ++ N F M +KP
Sbjct: 340 AMLIGIAMHG------------------------NSHLLLNYFS-------RMMEAGIKP 368
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEI 378
D + +L GC+ G +++ K + + + + + ++ A+ GLI++A+E+
Sbjct: 369 DGISFLGVLVGCSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVEL 428
Query: 379 FYEL-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
L D W+ ++ G ++G I A + Q++ KP+D
Sbjct: 429 TKGLPMGGDIFVWSGLLGGCRIHGNIEIAEQAAKQVME--LKPED 471
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 188/512 (36%), Positives = 291/512 (56%), Gaps = 41/512 (8%)
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
DN++ A + + G + H +K L D++V N++++MY + + +
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 147 DEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
D P DVVSWN I+G+++ A+ F +M + + DE T+++ L AC
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKE-QVRLDEVTLLNVLVACARTG 122
Query: 205 NLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+++G H + E +G++L+ MY K
Sbjct: 123 AMKVGSLCHALVVLNGFEINCYIGSSLVSMYAK--------------------------- 155
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
CG +E+AR +F+R P R++V WT+MI G Q RF EAV LFR+MQI +K D
Sbjct: 156 ----CGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDAT 211
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ +++ C Q+GAL+ G+++H Y + + + + V +LI+MY+KCG + KA +IF+ L
Sbjct: 212 IATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLT 271
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAK--PDDITFIGVLSACSHGGLVDEG 441
++D +WT +I G AMNG +AL+LF+QM G K P+++ F+GVL+ACSHGGLV++G
Sbjct: 272 KRDVFTWTVMIMGFAMNGLCVEALDLFAQM-EGEDKVMPNEVIFLGVLTACSHGGLVEQG 330
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
F+ M++VY + P++EHYGC++DLLGRA LL EAE+ I+ +P + ++ + +LL
Sbjct: 331 YHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVV---WRSLLF 387
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
ACR G V + E A +E++E K H LL+N+YA+ RW DV NVR M K
Sbjct: 388 ACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKK 447
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
PGCS IE++G IHEF GD SH E + I + L
Sbjct: 448 PGCSFIEVDGCIHEFFAGDESHFETEAICNTL 479
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 164/344 (47%), Gaps = 46/344 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q A ++ L + LN L+ C +P+ L+ + ++++N +I
Sbjct: 25 SQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDS---APRWASDVVSWNTIIA 81
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + G K+L F ++ + V D T V A G +K G H VV G E
Sbjct: 82 GYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEI 141
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ Y+ +S++ MY G + +++F+ MP+++VV W I+G + RF++AVD+FR M
Sbjct: 142 NCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDM- 200
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-----INQELEFTPIMGNALLDMYCK 236
Q + D+ T+ + +S+C + L+LG+ +H Y + +EL + N+L+DMY K
Sbjct: 201 QIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELS----VKNSLIDMYSK 256
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG +++A ++F + ++V WT M+ G+ G +A DLF + D V+
Sbjct: 257 CGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVM-------- 308
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P++ I + +LT C+ G +EQG
Sbjct: 309 ----------------------PNEVIFLGVLTACSHGGLVEQG 330
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 210/604 (34%), Positives = 327/604 (54%), Gaps = 38/604 (6%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP-- 92
+G A +F + L+++N++IK + + + K+ LF ++ ER V N
Sbjct: 103 NGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGY 162
Query: 93 ----------FVFKAVGWLGEVKKGEKVHGYVVKTGLE-----FDTYVCNSIMDMYGVLG 137
VF + +V + YV + LE F + +++ +LG
Sbjct: 163 AQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLG 222
Query: 138 ------KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
KI ++ FD M +DVVSWN I+G+ + ++A +F + + D
Sbjct: 223 GFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE-----SPVHDVF 277
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
T + +S + +E +E+ ++ E + NA+L Y + + A+ELFD MP
Sbjct: 278 TWTAMVSGYIQNRMVEEAREL---FDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMP 334
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+NV W +M++GY CG++ +A++LFD+ P RD V W AMI GY Q EA+ LF
Sbjct: 335 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVL 394
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M+ + ++ + L+ CA + ALE GK +HG + + V AL+ MY KCG
Sbjct: 395 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 454
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IE+A ++F E+ KD SW ++I G + +G +AL F M G KPDD T + VLSA
Sbjct: 455 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSA 514
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
CSH GLVD+GR++F+TMT+ Y ++P +HY C++DLLGRAGLL+EA L++ +P E +
Sbjct: 515 CSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAA 574
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I +G LL A R++GN ++ E A + +E ++S + LL+N+YAS+ RW DV +R
Sbjct: 575 I---WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 631
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD----RMAKTLLDSKQNA 607
+M++ GV+KVPG S IEI H F VGD H E EI++ L+ RM K SK +
Sbjct: 632 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSV 691
Query: 608 MEGD 611
+ D
Sbjct: 692 VLHD 695
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/504 (25%), Positives = 220/504 (43%), Gaps = 85/504 (16%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + ++YN +I + + G F + +LF ++ ER + V W
Sbjct: 78 ALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDL-------------VSW 124
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+K GYV L GK ++LF+ MP++DV SWN
Sbjct: 125 NVMIK------GYVRNRNL-----------------GK---ARELFERMPERDVCSWNTI 158
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
+SG+ + +DA VF RM P++ V ++N +L + + ++E
Sbjct: 159 LSGYAQNGCVDDARRVFDRM-------PEKNDVSWNALLSAYVQNSKLEEACVLFGSRE- 210
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ + N LL + K + EAR+ FD M ++V+ W ++++GY G++++AR LFD
Sbjct: 211 NWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE 270
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
SPV D+ WTAM++GY+Q +EA LF M + ++ A+L G Q +E
Sbjct: 271 SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMA 326
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K + + ++ +I YA+CG I +A +F ++ ++D SW ++I G + +
Sbjct: 327 KELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS 382
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACS-----------HGGLVDEGRR----FF 445
G +AL LF M G + + +F LS C+ HG LV G
Sbjct: 383 GHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 442
Query: 446 NTMTEVYQIQPKLEH---------------YGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
N + +Y +E + +I R G +EA + E +
Sbjct: 443 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLK 502
Query: 491 IIVPLYGALLSACRIYGNVDMGEK 514
A+LSAC G VD G +
Sbjct: 503 PDDATMVAVLSACSHTGLVDKGRQ 526
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 190/389 (48%), Gaps = 37/389 (9%)
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
D D+ WNV+IS +++ R +A+ VF+R MP +V L+N E
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKR-------MPRWSSVSYNAMISGYLRNGEF-- 106
Query: 211 EIHRYINQEL-EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
E+ R + E+ E + N ++ Y + L +ARELF+ MP ++V W +++SGY G
Sbjct: 107 ELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNG 166
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
++ AR +FDR P ++ V W A+++ YVQ ++ +EA LF + + LV+
Sbjct: 167 CVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRE-------NWALVSW-- 217
Query: 330 GCAQLGALEQGKWIHGYINENRITV-DAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
C G +++ K + + + V D V +I YA+ G I++A ++F E D
Sbjct: 218 NCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVF 277
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+WT+++ G N + +A ELF +M + +++++ +L+ G V+ + F+ M
Sbjct: 278 TWTAMVSGYIQNRMVEEARELFDRM----PERNEVSWNAMLAGYVQGERVEMAKELFDVM 333
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL-YGALLSACRIYG 507
+ + +I + G + EA+ L K+P + P+ + A+++ G
Sbjct: 334 P-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD-----PVSWAAMIAGYSQSG 383
Query: 508 NVDMGEKLAALLEKIESK--DSSFHTLLA 534
+ +L L+E+ + SSF + L+
Sbjct: 384 HSYEALRLFVLMEREGGRLNRSSFSSALS 412
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 8/279 (2%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ ++F + +N T N ++ + G + A+ +F + +++ +I +++
Sbjct: 324 EMAKELFDVMPCRNVSTWNTMIT--GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 381
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G ++L LF + G + ++ + ++ G+++HG +VK G E +V
Sbjct: 382 SGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 441
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGC 184
N+++ MY G I LF EM KD+VSWN I+G+ + E+A+ F M R+G
Sbjct: 442 GNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG- 500
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
L PD+ T+V+ LSAC+ ++ G++ + Q+ P + ++D+ + G L E
Sbjct: 501 -LKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEE 559
Query: 243 ARELFDEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDR 280
A L MP + W +++ G E A D+
Sbjct: 560 AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 598
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 299/493 (60%), Gaps = 13/493 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+++H Y ++ GL+ ++ ++ L + LFD++P V +N I
Sbjct: 5 KQIHAYSLRNGLDHTKFLIEKLLQ----LPDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60
Query: 168 MRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM 226
++ +M QGC+ P++ + AC +L N+ G+ +H + + + +
Sbjct: 61 GHPHRCWLLYCQMCSQGCS--PNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMF 118
Query: 227 G-NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
ALLDMY K G L AR+LFDEMP +++ W S+++GY G +E A +LF++ PVR+
Sbjct: 119 AMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRN 178
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIH 344
++ WTA+I+GY Q ++ +A+ +F ++ + KP++ + ++L C+QLGAL+ GK I
Sbjct: 179 VISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIE 238
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKI 403
Y N +A V+ A++E++A+CG IE+A ++F E+ +++ SW ++I GLA++G+
Sbjct: 239 AYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRC 298
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
AL+L+ QM+ +PDD+TF+G+L AC+HGG+V EGR+ F +M +Q+ PKLEHYGC
Sbjct: 299 IDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGC 358
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
L+DLLGRAG L EA LI+ +P + +I +G LL AC +GNV++GE A L K+E
Sbjct: 359 LVDLLGRAGELQEAYNLIQNMPMAPDSVI---WGTLLGACSFHGNVELGEVAAESLFKLE 415
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
+ + +L+NIYA A W V +R+ MK + K G S IE+ IHEF+V D SH
Sbjct: 416 PWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVEDRSH 475
Query: 584 SEMKEIYSMLDRM 596
+ EIY++L ++
Sbjct: 476 LKSGEIYALLHKI 488
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 200/441 (45%), Gaps = 78/441 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQI A + GL + KL+ P YA +F I P + YN I
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDLP------YACTLFDQIPKPSVYLYNKFI 54
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ F+ G + LL+ ++ +G SP+ +++ F+F A L V G+ +H + K+G
Sbjct: 55 QTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFA 114
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D + +++DMY LG + + ++LFDEMP +D+ +WN I+G+ + E A+++F +M
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 181 ---------------------------------RQGCNLMPDEGTVVSTLSACTALKNLE 207
+G P+E ++ S L AC+ L L+
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTK--PNEVSIASVLPACSQLGALD 232
Query: 208 LGKEIHRYINQELEF-TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC-WTSMVSGY 265
+GK I Y F + NA+L+++ +CG + EA+++FDE+ +K +C W +M+ G
Sbjct: 233 IGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGL 292
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G R +A+ L+ +M I +++PD V
Sbjct: 293 AVHG-------------------------------RCIDALQLYDQMLIRKMRPDDVTFV 321
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYEL- 382
LL C G + +G+ + + E++ V + L+++ + G +++A + +
Sbjct: 322 GLLLACTHGGMVAEGRQLFESM-ESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMP 380
Query: 383 REKDAASWTSIICGLAMNGKI 403
D+ W +++ + +G +
Sbjct: 381 MAPDSVIWGTLLGACSFHGNV 401
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/592 (34%), Positives = 328/592 (55%), Gaps = 30/592 (5%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-------YAEKIF--------GSI 48
L ++ A++ GL +NP+ ++++ S +A +F G +
Sbjct: 31 LNKLHARLITTGLIKNPDLTTRIVLAFASASASASSRRPFLAEFARCVFHEHHVSSSGEV 90
Query: 49 QSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGE 108
+ P L +N++IK+ + RK+L L + E GV D F++ KA LG VK+G
Sbjct: 91 EDPFL--WNVVIKSHSHGVDPRKALFLLCLMLENGVPVDKFSFSLALKACSRLGFVKEGT 148
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+VHG+++KTG D ++ N ++ +Y G + +++FD MP +D VS+N I G++KC
Sbjct: 149 QVHGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNSMIDGYLKCG 208
Query: 169 RFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIM 226
E A ++F LMP E +++ S G + + E+ E I
Sbjct: 209 LVESAGELF-------GLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMPEKDLIS 261
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
N+++ Y K G + +A+ LFD MP ++V+ W M+ GY G + +A+ LFD+ P RD+
Sbjct: 262 WNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDV 321
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
V++ +M++G VQ EA+ +F M+ L PD+ LV +L+ AQLG L + +H
Sbjct: 322 VVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAXAQLGRLSKAIDMHL 381
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
YI E + + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G
Sbjct: 382 YIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGES 441
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A ++ Q+ KPD ITF+GVL+ACSH GLV EG F M ++I+P+L+HYGC++
Sbjct: 442 AFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 501
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
D+L R+G ++ A+ LI +P E N++I + L+AC + + GE +A L
Sbjct: 502 DILARSGSIELAKNLIEGMPIEPNDVI---WRTFLTACSHHKEFETGELVAKHLILQAGY 558
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
+ S + LL+N+YAS W+DV VR MKE + K+PGCS IE++G +HEFL
Sbjct: 559 NPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELDGRVHEFL 610
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 268/439 (61%), Gaps = 14/439 (3%)
Query: 161 ISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLS------ACTALKNLELGKEIH 213
I H R + A+ ++ + R G L P T+ S L A + L L H
Sbjct: 60 IRAHASSGRPQAALPLYAHLIRAG--LFPTPHTLPSLLKSLALSPAVPGARRLALAVHAH 117
Query: 214 RYINQELEFTPIMGNALLDMYCKC-GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+ L ++ NAL+ ++ G L++A L + + ++++ + G++
Sbjct: 118 -AVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVA 176
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
AR LFD P R+ V W+AM+NGYVQ EA+ +F +MQ ++PD +LV +L CA
Sbjct: 177 DARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACA 236
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
QLGALEQGKW+HGY+ N I + + TAL++MYAKCG ++ +E+F +++K+ +WT+
Sbjct: 237 QLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTT 296
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
+I GLAM+G+ + +L LFSQM S G KPDDI FIG L AC+H GLVD+GR FN+M Y
Sbjct: 297 MIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNY 356
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
I+PK+EHYGC++DLL R GLL EA +++ K+P + + +I +GAL++ CR + NV++
Sbjct: 357 GIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALI---WGALMAGCRFHKNVELA 413
Query: 513 EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGI 572
E + ++E S + LL NIY+++ R +R M+E GV K PGCS++EI G+
Sbjct: 414 EYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGV 473
Query: 573 IHEFLVGDPSHSEMKEIYS 591
IH+F+VGD SH +K+I +
Sbjct: 474 IHQFIVGDLSHPRIKDILT 492
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 75/398 (18%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEK----VH 111
++ LI+A A G + +L L++ L G+ P T P + K++ V + VH
Sbjct: 56 HDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVH 115
Query: 112 GYVVKTGLE--------------------------------FDTYVCNSIMDMYGVLGKI 139
+ V+ GL D N+++ + G++
Sbjct: 116 AHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRV 175
Query: 140 CNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSA 199
+ + LFDEMP+++ VSW+ ++G+V+ +A+ VF +M Q + PD+ +V L+A
Sbjct: 176 ADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQM-QAQGVRPDDTVLVGVLAA 234
Query: 200 CTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
C L LE GK +H Y+ + T +G AL+DMY KCG + E+F+ M +KNV+ W
Sbjct: 235 CAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAW 294
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
T+M+ G G R +++ LF +M+ +K
Sbjct: 295 TTMIKGLAMHG-------------------------------RGSDSLTLFSQMESSGVK 323
Query: 319 PDKFILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
PD + L C G +++G+ + + +N I ++++ A+ GL+ +A +
Sbjct: 324 PDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARD 383
Query: 378 IFYELREK-DAASWTSIICGLAMNGKINKALELFSQMI 414
+ ++ K DA W +++ G + +K +EL +I
Sbjct: 384 MVEKMPMKPDALIWGALMAGC----RFHKNVELAEYVI 417
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 131/249 (52%), Gaps = 6/249 (2%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+ T N L+ H G + A +F + ++++ ++ + + G R++L +FS+
Sbjct: 158 DASTFNTLIT--AHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQ 215
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
++ +GV PD+ V A LG +++G+ VHGY+ + ++ +++DMY G+
Sbjct: 216 MQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGE 275
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ ++F+ M DK+V++W I G R D++ +F +M + + PD+ + L
Sbjct: 276 VQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQM-ESSGVKPDDIAFIGALC 334
Query: 199 ACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NV 255
ACT ++ G+E+ + P + + ++D+ + G LSEAR++ ++MP K +
Sbjct: 335 ACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDA 394
Query: 256 ICWTSMVSG 264
+ W ++++G
Sbjct: 395 LIWGALMAG 403
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 297/522 (56%), Gaps = 20/522 (3%)
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
F+F + + K+H +V +G Y+ N ++ +Y G + + +K+F+++
Sbjct: 29 FIFSVLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAP 88
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
WN I GH + + ++++F+RM + + T LSAC + G++I
Sbjct: 89 STTVWNQIIKGHTRSKTSKKSIELFKRMTL-AGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGC-----LSEARELFDEMPNKNVICWTSMVSGYV 266
H R + + L+++Y G L AR LFDEMP+ NV+ W S+++GYV
Sbjct: 148 HGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYV 207
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G + AR +FD P R++ WT M+ G+ Q + A++LF +M+ ++ D+ LVA
Sbjct: 208 RRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVA 267
Query: 327 LLTGCAQLGALEQGKWIHGYINEN----RITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
L+ CA+LG L GKWIHGY+ + V + ALI MYA CG+++ A ++F E+
Sbjct: 268 ALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEI 327
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGG---AKPDDITFIGVLSACSHGGLVD 439
+++ SW+SII G A G +A+ +F M+ G +PD+ITFIG L+ACSH GL+
Sbjct: 328 PQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLIS 387
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
+G R F +M + + + P++EHYGC++DLL RAGLL EA LI +P + N + +GAL
Sbjct: 388 DGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAV---WGAL 444
Query: 500 LSACRIYGNVDMGEKLAALLE---KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
LS CR++ N ++ +A L ++ + + LLAN+YA+ RW+D VR+ M ++
Sbjct: 445 LSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDI 504
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
GV+K G S IEING++ F+VG+ +H ++ IY ML + +
Sbjct: 505 GVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEMLGNITR 546
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 200/442 (45%), Gaps = 86/442 (19%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L +I AQI G Q LN L+ + S G+L A+K+F I +P +N +IK
Sbjct: 43 LAKIHAQIVVSGFSQKNYILNHLLSL--YISFGSLGSAQKVFEDITAPSTTVWNQIIKGH 100
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ + +KS+ LF ++ GV + FTY F+ A ++GE++HG V+ G +
Sbjct: 101 TRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNL 160
Query: 124 YVCNSIMDMYGVLG-----KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
YV +++++Y G + + LFDEMPD +VV WN ++G+V+ F+ A VF
Sbjct: 161 YVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFD 220
Query: 179 RM--------------------------------RQGCNLMPDEGTVVSTLSACTALKNL 206
M R G L D+ +V+ LSAC L +L
Sbjct: 221 EMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVEL--DQVALVAALSACAELGDL 278
Query: 207 ELGKEIHRYI-----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
LGK IH Y+ ++ L + NAL+ MY CG + A ++F+E+P +N + W+S+
Sbjct: 279 TLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQRNTVSWSSI 338
Query: 262 VSGYV--NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII---R 316
++G+ CG EA+ +F+ M
Sbjct: 339 ITGFAKQGCGV---------------------------------EAIRIFQLMLCSGQNE 365
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKA 375
++PD+ + LT C+ G + G + +++ + + ++++ ++ GL+ +A
Sbjct: 366 VRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEA 425
Query: 376 LEIFYELREK-DAASWTSIICG 396
L + + K + A W +++ G
Sbjct: 426 LSLIESMPMKPNNAVWGALLSG 447
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 313/558 (56%), Gaps = 44/558 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A + F S ++ ++ +N+++ A+ + +S +F++++ G+ P+ FTYP + +
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS 485
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L V GE++H V+KTG +F+ YV + ++DMY LGK+ + K+F + +KDVVSW
Sbjct: 486 LRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAM 545
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY----- 215
I+G+ + +F +A+++F+ M Q + D S +SAC ++ L G++IH
Sbjct: 546 IAGYAQHEKFAEALNLFKEM-QDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG 604
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ +L +GNAL+ +Y +CG + +A FD++ +K+ I W S++SG+ G E
Sbjct: 605 YSDDLS----VGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCE--- 657
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
EA++LF +M + + F ++ A +
Sbjct: 658 ----------------------------EALSLFSQMSKAGQEINSFTFGPAVSAAANVA 689
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
++ GK IH I + + V+ LI +YAKCG I+ A F+E+ EK+ SW +++
Sbjct: 690 NVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLT 749
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G + +G KAL LF M G P+ +TF+GVLSACSH GLVDEG ++F +M EV+ +
Sbjct: 750 GYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLV 809
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
PK EHY C++DLLGR+GLL A + ++P + + ++ LLSAC ++ N+D+GE
Sbjct: 810 PKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCR---TLLSACIVHKNIDIGEFA 866
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A+ L ++E KDS+ + LL+N+YA +W RQ MK+ GV+K PG S IE+N +H
Sbjct: 867 ASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHA 926
Query: 576 FLVGDPSHSEMKEIYSML 593
F GD H + +IY L
Sbjct: 927 FFAGDQKHPNVDKIYEYL 944
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 247/487 (50%), Gaps = 36/487 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
+++I A+ G + + N L+ + +G L A+K+F +Q +++ ++
Sbjct: 189 VEKIHARTITHGYENSLFVCNPLIDL--YFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGL 246
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
++ G +++LLF ++ GV P + + V A + K GE++HG V+K G +T
Sbjct: 247 SQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLET 306
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YVCN+++ +Y LG +++F+ M +D VS+N ISG + + A+++F++M
Sbjct: 307 YVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLD 366
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
C L PD TV S LSAC+++ L +GK+ H Y I + I+ ALLD+Y KC +
Sbjct: 367 C-LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A E F +NV VLW M+ Y +
Sbjct: 426 AHEFFLSTETENV-------------------------------VLWNVMLVAYGLLDNL 454
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+E+ +F +MQ+ ++P++F ++L C+ L A++ G+ IH + + + V++ L
Sbjct: 455 NESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVL 514
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MYAK G ++ AL+IF L+EKD SWT++I G A + K +AL LF +M G D+
Sbjct: 515 IDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDN 574
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
I F +SAC+ +++G++ + V L L+ L R G + +A
Sbjct: 575 IGFASAISACAGIQALNQGQQ-IHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFD 633
Query: 483 KIPNENN 489
KI +++N
Sbjct: 634 KIFSKDN 640
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 229/488 (46%), Gaps = 43/488 (8%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ +I ++G +LM + + G+L A +F + L +N ++ F
Sbjct: 89 KLHGKILKMGFCAEVVLCERLMDL--YIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA 146
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG--EKVHGYVVKTGLEFDT 123
+ L LF ++ + V PD TY V + G G+V EK+H + G E
Sbjct: 147 GKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSL 205
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+VCN ++D+Y G + + KK+FD + +D VSW +SG + E+AV +F +M
Sbjct: 206 FVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTS 265
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
+ P S LSACT ++ ++G+++H + Q + NAL+ +Y + G
Sbjct: 266 -GVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIP 324
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A ++F+ M RD V + ++I+G Q
Sbjct: 325 AEQVFNAMLQ-------------------------------RDEVSYNSLISGLSQQGYS 353
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
D+A+ LF++M + LKPD + +LL+ C+ +GAL GK H Y + ++ D ++ AL
Sbjct: 354 DKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGAL 413
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
+++Y KC I+ A E F ++ W ++ + +N++ ++F+QM G +P+
Sbjct: 414 LDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQ 473
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAEEL 480
T+ +L CS VD G + T+V + + Y LID+ + G LD A ++
Sbjct: 474 FTYPSILRTCSSLRAVDLGEQIH---TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKI 530
Query: 481 IRKIPNEN 488
R++ ++
Sbjct: 531 FRRLKEKD 538
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 228/518 (44%), Gaps = 75/518 (14%)
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
+ ERGV ++ TY ++ G G K+HG ++K G + +C +MD+Y G
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ +FDEMP + + WN + V + +FRRM Q + PDE T L
Sbjct: 119 LDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQE-KVKPDERTYAGVLR 177
Query: 199 ACTALK-NLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
C ++IH R I E + + N L+D+Y K G L+ A+++FD +
Sbjct: 178 GCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQK---- 233
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
RD V W AM++G Q +EAV LF +M
Sbjct: 234 ---------------------------RDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSG 266
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+ P +I ++L+ C ++ + G+ +HG + + +++ V AL+ +Y++ G A
Sbjct: 267 VYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAE 326
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F + ++D S+ S+I GL+ G +KALELF +M KPD +T +LSACS G
Sbjct: 327 QVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG 386
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEH----YGCLIDL------------------------- 467
+ G++F + Y I+ + G L+DL
Sbjct: 387 ALLVGKQFHS-----YAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLW 441
Query: 468 ---LGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEK 521
L GLLD E + E I P Y ++L C VD+GE++ + K
Sbjct: 442 NVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK 501
Query: 522 IESKDSSF-HTLLANIYASANRWEDVTNVRQKMKEMGV 558
+ + + ++L ++YA + + + +++KE V
Sbjct: 502 TGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDV 539
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 55/256 (21%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI A I + G E N L+ + GN+ AE+ F + +++N ++ ++
Sbjct: 695 KQIHAMIIKTGHDSETEVSNVLITL--YAKCGNIDDAERQFFEMPEKNEISWNAMLTGYS 752
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEK-------VHGYVVKT 117
+ G K+L LF +++ GV P++ T+ V A +G V +G K VHG V K
Sbjct: 753 QHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKP 812
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
+ Y C ++D+ G G + ++ +EMP
Sbjct: 813 ----EHYAC--VVDLLGRSGLLSRARRFVEEMP--------------------------- 839
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALL-DMYC- 235
+ PD + LSAC KN+++G+ ++ ELE LL +MY
Sbjct: 840 --------IQPDAMVCRTLLSACIVHKNIDIGEFAASHL-LELEPKDSATYVLLSNMYAV 890
Query: 236 --KCGCLSEARELFDE 249
K GC R++ +
Sbjct: 891 TGKWGCRDRTRQMMKD 906
>gi|215741011|dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/516 (37%), Positives = 294/516 (56%), Gaps = 44/516 (8%)
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
+R V+PD +T+P V KA G + G VHG V+TGL+ D + N+++ Y +G
Sbjct: 1 MRRAAVAPDAYTFPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGD 60
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ +K+FD +D+VSWN ++G+V C + A D+F MRQ S
Sbjct: 61 CRSGRKVFDHGV-RDLVSWNSMVAGYVGCGEVDLAQDLFDEMRQ-----------RDAFS 108
Query: 199 ACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK-CGCLSEARELFDEMPNKNVIC 257
T ++D Y + G + ARELFD+MP+++++C
Sbjct: 109 WAT----------------------------MIDGYGEMAGGVDRARELFDQMPDRDLVC 140
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W SM+ GY G++++AR LF+ P R+++ W+ +I+GYV+F +EA+ F+ M +
Sbjct: 141 WNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGI 200
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
KPD+ V + CAQLGALEQG+W+H Y+ + ++ D VV TALI+MY KCG ++ A
Sbjct: 201 KPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKL 260
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
IF + +K +W +I GL +G A++LF+QM + A DD++ + VL++C+H GL
Sbjct: 261 IFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGL 320
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
V EG F M + ++PK+EHYG LIDLLGRAG +D+A I +P E L+G
Sbjct: 321 VSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTP---ELWG 377
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
+LL++CR + V++ E L + + DS + LL+NIYA W+DV +R+ M G
Sbjct: 378 SLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEG 437
Query: 558 VRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
++K G S IE++G IHEF+ G SH +EIY L
Sbjct: 438 MKKNIGRSVIEVDGQIHEFVNGGSSHPHKEEIYLTL 473
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ HG + A +F + +++++++I + + G ++L F ++ G+ PD
Sbjct: 148 YARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAA 207
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A LG +++G +H Y+ K + FD V +++DMY G++ K +F+ MP
Sbjct: 208 VGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPK 267
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K VV+WNV I G DA+ +F +M M D+ ++++ L++CT + G
Sbjct: 268 KSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPM-DDLSILAVLTSCTHAGLVSEGLG 326
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
I + ++L P + + AL+D+ + G + +AR + MP
Sbjct: 327 IFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMP 368
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/590 (34%), Positives = 328/590 (55%), Gaps = 28/590 (4%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-----YAEKIF--------GSIQS 50
L ++ A++ GL +NP+ ++++ S + +A +F G ++
Sbjct: 11 LNKLHARLITTGLIKNPDLTTRIVLAFASASASSRRPFLAEFARCVFHEHHVSSSGEVED 70
Query: 51 PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
P L +N++IK+ + RK+L L + E V D F+ KA LG VK+G +V
Sbjct: 71 PFL--WNVVIKSHSHGVDPRKALFLLCLMLESSVPVDKFSLSLALKACSRLGFVKEGTQV 128
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
HG+++KTG D ++ N ++ +Y G + +++FD MP++D VS+N I G+VKC
Sbjct: 129 HGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKCGLV 188
Query: 171 EDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGN 228
E A ++F +LMP E +++ S G ++ + E+ E I N
Sbjct: 189 ESAGELF-------DLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEMPEKDLISWN 241
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+++ Y K G + +A+ LF+ MP ++V+ W M+ GY G + A+ LFD+ P RD+V
Sbjct: 242 SMIGGYVKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVVA 301
Query: 289 WTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
+ +M++GYVQ EA+ +F M+ L PD+ LV +L+ AQLG L + +H YI
Sbjct: 302 YNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLYI 361
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
E + + + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G A
Sbjct: 362 VEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAF 421
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
++ Q+ KPD ITF+GVL+ACSH GLV EG F M ++I+P+L+HYGC++D+
Sbjct: 422 DMLFQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDI 481
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
L R+G + A LI +P E N++I + L+AC + + GE +A L +
Sbjct: 482 LARSGSIKLARNLIEGMPIEPNDVI---WRTFLTACSHHKEFETGELVAKHLILXGGYNP 538
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
S + LL+N+YAS W+DV VR MKE + K+PGCS IE++G +HEFL
Sbjct: 539 SSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELDGRVHEFL 588
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/567 (36%), Positives = 308/567 (54%), Gaps = 39/567 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + ++++N +I A+ G ++ +F K+++ G PD+ TY +
Sbjct: 283 GSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLL 342
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
G + ++VH + V+ GL D V ++ + MY G I + + +FD++ ++V
Sbjct: 343 NTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVT 402
Query: 156 SWNVSISG--HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
+WN I G KC R +A+ +F +MR+ PD T V+ LSA + LE KE+H
Sbjct: 403 TWNAMIGGVAQQKCGR--EALSLFLQMRRE-GFFPDATTFVNILSANVGEEALEWVKEVH 459
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
Y +GNAL+ MY KC G
Sbjct: 460 SYAIDAGLVDLRVGNALVHMYAKC-------------------------------GNTMY 488
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
A+ +FD R++ WT MI+G Q EA +LF +M + PD V++L+ CA
Sbjct: 489 AKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACAS 548
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
GALE K +H + + D V AL+ MYAKCG ++ A +F ++ E+D SWT +
Sbjct: 549 TGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVM 608
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I GLA +G+ AL+LF +M G KP+ +F+ VLSACSH GLVDEGRR F ++T+ Y
Sbjct: 609 IGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYG 668
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I+P +EHY C++DLLGRAG L+EA+ I +P E + P +GALL AC YGN++M E
Sbjct: 669 IEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGD--AP-WGALLGACVTYGNLEMAE 725
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
A K++ K +S + LL+NIYA+ WE VR M+ G+RK PG S IE++ I
Sbjct: 726 FAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQI 785
Query: 574 HEFLVGDPSHSEMKEIYSMLDRMAKTL 600
H F+VGD SH E KEIY+ L + K L
Sbjct: 786 HSFVVGDTSHPESKEIYAKLKDLIKRL 812
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 162/594 (27%), Positives = 263/594 (44%), Gaps = 81/594 (13%)
Query: 5 KQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
K+I A I Q G Q + L + V C G++ A+ IF + ++++ ++I
Sbjct: 50 KKIHAHIIQSGFQSDVRVETALVNMYVKC-----GSIDDAQLIFDKMVERNVISWTVMIG 104
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A G +++ F +++ G P+++TY + A G ++ ++VH + V GL
Sbjct: 105 GLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLAL 164
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
D V N+++ MY G I + + +FD M ++D+ SW V I G + R ++A +F +M
Sbjct: 165 DLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQME 224
Query: 181 RQGCNLMPDEGTVVSTL--SACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKC 237
R GC +P+ T +S L SA T+ LE KE+H++ + + + +GNAL+ MY KC
Sbjct: 225 RGGC--LPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKC 282
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G ++ AR +FD RD++ W AMI G
Sbjct: 283 -------------------------------GSIDDARLVFDGMCDRDVISWNAMIGGLA 311
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q EA +F +MQ PD ++LL GA E K +H + E + D
Sbjct: 312 QNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLR 371
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V +A + MY +CG I+ A IF +L ++ +W ++I G+A +AL LF QM G
Sbjct: 372 VGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREG 431
Query: 418 AKPDDITFIGVLSAC-----------SHGGLVDEG---RRFFNTMTEVYQ---------- 453
PD TF+ +LSA H +D G R N + +Y
Sbjct: 432 FFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQ 491
Query: 454 -----IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRI 505
++ + + +I L + G EA L ++ E IVP Y ++LSAC
Sbjct: 492 VFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREG---IVPDATTYVSILSACAS 548
Query: 506 YGNVD-MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
G ++ + E + + D L ++YA +D V M E V
Sbjct: 549 TGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDV 602
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 211/434 (48%), Gaps = 38/434 (8%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+I +A+ G ++ ++S++R G P+ TY + KA +K G+K+H +++++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ D V ++++MY G I + + +FD+M +++V+SW V I G R ++A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 179 RM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
+M R+G +P+ T VS L+A + LE KE+H + +N L +GNAL+ MY K
Sbjct: 121 QMQREG--FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G + +AR +FD M +++ WT M I G
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVM-------------------------------IGGL 207
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA--QLGALEQGKWIHGYINENRITV 354
Q R EA +LF +M+ P+ +++L A GALE K +H + +
Sbjct: 208 AQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFIS 267
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D V ALI MYAKCG I+ A +F + ++D SW ++I GLA NG ++A +F +M
Sbjct: 268 DLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQ 327
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
G PD T++ +L+ G + + EV + L + + R G +
Sbjct: 328 QEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV-GLVSDLRVGSAFVHMYIRCGSI 386
Query: 475 DEAEELIRKIPNEN 488
D+A+ + K+ N
Sbjct: 387 DDAQLIFDKLAVRN 400
>gi|224092607|ref|XP_002309680.1| predicted protein [Populus trichocarpa]
gi|222855656|gb|EEE93203.1| predicted protein [Populus trichocarpa]
Length = 500
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 295/533 (55%), Gaps = 43/533 (8%)
Query: 48 IQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG 107
+ SP + +N +IK G ++++ + ++E G DNFT+P + KA G G
Sbjct: 10 LPSPEMRQWNEIIKKHVLNGDAVQAMVTYVNVQEIGFHADNFTFPILLKAAGSWSSPCIG 69
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+HG +K G +V ++++MY + + K+F++MP KDVV+WN + +
Sbjct: 70 LALHGQTIKAGFSSHVFVQTALLNMYRSHSCVADACKVFEKMPVKDVVAWNSILDAYAST 129
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG 227
+ +DA+ VF N MP LK+L F
Sbjct: 130 DQMDDALKVF-------NSMP--------------LKDLS-------------SF----- 150
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N ++ Y G AR +FD M K+++ W SM+S Y+ +E+A DLF P ++I+
Sbjct: 151 NIMISGYSSIGKTLSARSIFDNMAEKDIVSWNSMISAYIQGEDMERACDLFREMPAKNII 210
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W M+ G++Q + E + LF EM+ PD + +L+ CA G+L++G +H Y
Sbjct: 211 TWNTMVKGFLQNQLYAEVLDLFDEMKTTNCLPDYLTVTGVLSACAHSGSLKKGTEVHIYA 270
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+N + V TALI+MYAKCG I++ L++FY+ + KD W ++I GLA++G AL
Sbjct: 271 IDNGLASSPHVTTALIDMYAKCGSIQQGLQVFYKSQVKDIYCWNALISGLALHGHGYAAL 330
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+F++M +PDDITFIG+LSACSH GLV EG + F +M + + I PK+EHYGC++DL
Sbjct: 331 NIFNKMRKNHTRPDDITFIGLLSACSHSGLVQEGSQLFYSMQKEFGISPKIEHYGCMVDL 390
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
L RA LD A +LI+ +P + E I+ GALLSAC ++ ++++GE++ L+ + S
Sbjct: 391 LSRARHLDCALQLIKTMPFKPGEAIL---GALLSACIVHQDLEVGERVVKLVSSRGNYLS 447
Query: 528 SFHTLL-ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++ +N+YAS +WE+ R+ M + G+ K G S +E+NG H+FL G
Sbjct: 448 DGELMMFSNLYASCGQWEEANKWREMMNDTGIVKTAGFSVVEVNGKFHKFLAG 500
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 140/309 (45%), Gaps = 41/309 (13%)
Query: 34 SHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPF 93
SH + A K+F + ++A+N ++ A+A +L +F+ + + +S ++
Sbjct: 97 SHSCVADACKVFEKMPVKDVVAWNSILDAYASTDQMDDALKVFNSMPLKDLS----SFNI 152
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD 153
+ +G+ + + E D NS++ Y + LF EMP K+
Sbjct: 153 MISGYSSIGKTLSARSIFDNMA----EKDIVSWNSMISAYIQGEDMERACDLFREMPAKN 208
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
+++WN + G ++ + + +D+F M+ N +PD TV LSAC +L+ G E+H
Sbjct: 209 IITWNTMVKGFLQNQLYAEVLDLFDEMKT-TNCLPDYLTVTGVLSACAHSGSLKKGTEVH 267
Query: 214 RY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
Y I+ L +P + AL+DMY KCG + + ++F + K++ CW +++SG G
Sbjct: 268 IYAIDNGLASSPHVTTALIDMYAKCGSIQQGLQVFYKSQVKDIYCWNALISGLALHG--- 324
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+GY N +F +M+ +PD + LL+ C+
Sbjct: 325 ---------------------HGYAALN-------IFNKMRKNHTRPDDITFIGLLSACS 356
Query: 333 QLGALEQGK 341
G +++G
Sbjct: 357 HSGLVQEGS 365
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 3/212 (1%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F + + ++ +N ++K F + + + L LF +++ PD T V A G
Sbjct: 200 LFREMPAKNIITWNTMVKGFLQNQLYAEVLDLFDEMKTTNCLPDYLTVTGVLSACAHSGS 259
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+KKG +VH Y + GL +V +++DMY G I ++F + KD+ WN ISG
Sbjct: 260 LKKGTEVHIYAIDNGLASSPHVTTALIDMYAKCGSIQQGLQVFYKSQVKDIYCWNALISG 319
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT 223
A+++F +MR+ + PD+ T + LSAC+ ++ G ++ + +E +
Sbjct: 320 LALHGHGYAALNIFNKMRKN-HTRPDDITFIGLLSACSHSGLVQEGSQLFYSMQKEFGIS 378
Query: 224 PIMGN--ALLDMYCKCGCLSEARELFDEMPNK 253
P + + ++D+ + L A +L MP K
Sbjct: 379 PKIEHYGCMVDLLSRARHLDCALQLIKTMPFK 410
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 105/262 (40%), Gaps = 53/262 (20%)
Query: 5 KQIQAQIFQI--GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
K + I+ I GL +P L+ + G++ ++F Q + +N LI
Sbjct: 262 KGTEVHIYAIDNGLASSPHVTTALIDM--YAKCGSIQQGLQVFYKSQVKDIYCWNALISG 319
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
A G +L +F+K+R+ PD+ T+ + A G V++G ++
Sbjct: 320 LALHGHGYAALNIFNKMRKNHTRPDDITFIGLLSACSHSGLVQEGSQLF----------- 368
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
S+ +G+ KI + + D + S + H+ C A+ + + M
Sbjct: 369 ----YSMQKEFGISPKIEHYGCMVDLL----------SRARHLDC-----ALQLIKTMP- 408
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD--------MY 234
P E + + LSAC ++LE+G+ + + ++ GN L D +Y
Sbjct: 409 ---FKPGEAILGALLSACIVHQDLEVGERVVKLVSSR-------GNYLSDGELMMFSNLY 458
Query: 235 CKCGCLSEARELFDEMPNKNVI 256
CG EA + + M + ++
Sbjct: 459 ASCGQWEEANKWREMMNDTGIV 480
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/489 (37%), Positives = 305/489 (62%), Gaps = 13/489 (2%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMY---GVLGKICNV----KKLFDEMPDKDVVSWNVSIS 162
+HG++++T L D +V + ++ + K N+ +F ++ + ++ +N+ I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
A + +M + + PD T + A + ++ + +G++ H I + +
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKS-RIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQ 149
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ N+L+ MY CG ++ A +F +M ++V+ WTSMV+GY CG +E AR++FD
Sbjct: 150 NDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEM 209
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P R++ W+ MINGY + N F++A+ LF M+ + ++ ++V++++ CA LGALE G+
Sbjct: 210 PHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGE 269
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+ Y+ ++ +TV+ ++ TAL++M+ +CG IEKA+ +F L E D+ SW+SII GLA++G
Sbjct: 270 RAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHG 329
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+KA+ FSQMIS G P D+TF VLSACSHGGLV++G + M + + I+P+LEHY
Sbjct: 330 HAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHY 389
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++D+LGRAG L EAE I K+ + N P+ GALL AC+IY N ++ E++ +L K
Sbjct: 390 GCIVDMLGRAGKLAEAENFILKMHVKPN---APILGALLGACKIYKNTEVAERVGNMLIK 446
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG-D 580
++ + S ++ LL+NIYA A +W+ + ++R MKE V+K PG S IEI+G I++F +G D
Sbjct: 447 VKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDD 506
Query: 581 PSHSEMKEI 589
H EM +I
Sbjct: 507 QKHPEMGKI 515
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 158/317 (49%), Gaps = 40/317 (12%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGN-----LLYAEKIFGSIQSPCLLAY 56
+ LK I + + L + ++L+ C S N L YA IF IQ+P L +
Sbjct: 26 SDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVF 85
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
NLLI+ F+ K+ ++++ + + PDN T+PF+ KA + V GE+ H +V+
Sbjct: 86 NLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 145
Query: 117 TGLEFDTYVCNSIMDMYGVLGKIC-------------------------------NVKKL 145
G + D YV NS++ MY G I N +++
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREM 205
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALK 204
FDEMP +++ +W++ I+G+ K FE A+D+F M R+G ++ +E +VS +S+C L
Sbjct: 206 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG--VVANETVMVSVISSCAHLG 263
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
LE G+ + Y + + I+G AL+DM+ +CG + +A +F+ +P + + W+S++
Sbjct: 264 ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIK 323
Query: 264 GYVNCGQLEKARDLFDR 280
G G KA F +
Sbjct: 324 GLAVHGHAHKAMHYFSQ 340
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + L+++ +IK A G K++ FS++ G P + T+ V
Sbjct: 298 GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVL 357
Query: 96 KAVGWLGEVKKGEKVHGYVVKT-GLE--FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
A G V+KG +++ + K G+E + Y C I+DM G GK+ + +M K
Sbjct: 358 SACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGC--IVDMLGRAGKLAEAENFILKMHVK 415
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/527 (37%), Positives = 306/527 (58%), Gaps = 16/527 (3%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N +IK+ + R++L L + E V D F+ V KA LG K+G ++HG++
Sbjct: 53 WNAVIKSHSHGVDPRQALFLLCSMIENNVPVDKFSLSLVTKACSRLGFAKEGMQIHGFLT 112
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
KT + D ++ N ++ +Y + +++FD MP +D VS+N I G+VKC E A +
Sbjct: 113 KTVICSDLFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARE 172
Query: 176 VFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDM 233
+F +LMP E ++S S E G +I + E+ E I N+L+D
Sbjct: 173 LF-------DLMPKEKKNLISWNSMIGGYAQREDGVDIASKLFAEMPEKDLISWNSLIDG 225
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y K G + +A+ LFD MP ++V+ W +M+ GY G + KA+ LFD P RD+V + +M+
Sbjct: 226 YVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDVMPHRDVVAYNSMM 285
Query: 294 NGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
GYVQ EA+ +F +M+ L PD+ LV +L+ AQLG L + IH YI E R
Sbjct: 286 GGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIVEKRF 345
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
+D + ALI+MY+KCG I++A+ +F + K W ++I GLA++G A ++ +
Sbjct: 346 LLDGKLGVALIDMYSKCGSIQQAMAVFEGIENKSIDHWNAMIGGLAVHGLGEAAFDMLME 405
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
+ KPD ITF+GVL+ACSH GLV EG F M ++I+P+L+HYGC++DLL R+G
Sbjct: 406 IEKRFIKPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDLLARSG 465
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA--LLEKIESKDSSFH 530
++ A+ LI ++P E N++I + L+AC + + E + A L+ + SS+
Sbjct: 466 SIELAKHLISEMPIEPNDVI---WRTFLNACSHHKEFETRELVVAENLILQAGYNPSSY- 521
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
LL+N+YAS WEDV VR MKE + KVPGCS IE++G +HEFL
Sbjct: 522 VLLSNMYASFEMWEDVRRVRTMMKERKIEKVPGCSWIELDGKVHEFL 568
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 174/422 (41%), Gaps = 91/422 (21%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKG---SFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
YA ++F + ++YN +I + K G S R+ L K ++ +S ++ + +
Sbjct: 138 YARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEKKNLISWNSMIGGYAQR 197
Query: 97 AVG------WLGEVKKGEKVH------GYVVKTGLE-----------FDTYVCNSIMDMY 133
G E+ + + + GYV +E D +++D Y
Sbjct: 198 EDGVDIASKLFAEMPEKDLISWNSLIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGY 257
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
LG + K LFD MP +DVV++N + G+V+ +A++VF M + +L PDE T+
Sbjct: 258 AKLGFVHKAKSLFDVMPHRDVVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTL 317
Query: 194 VSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
V LSA L L +IH YI + +G AL+DMY KCG + +A +F+ + N
Sbjct: 318 VIVLSAIAQLGRLSKAVDIHLYIVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIEN 377
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K++ W +M+ G G E A D + E+
Sbjct: 378 KSIDHWNAMIGGLAVHGLGEAAFD-------------------------------MLMEI 406
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ +KPD V +L C+ G +++G E+ + I
Sbjct: 407 EKRFIKPDYITFVGVLNACSHSGLVKEG-------------------LLCFELMRRKHKI 447
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
E L+ + ++ LA +G I A L S+M +P+D+ + L+AC
Sbjct: 448 EPRLQ-----------HYGCMVDLLARSGSIELAKHLISEM---PIEPNDVIWRTFLNAC 493
Query: 433 SH 434
SH
Sbjct: 494 SH 495
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 209/604 (34%), Positives = 326/604 (53%), Gaps = 38/604 (6%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP-- 92
+G A K+F + L+++N++IK + + + K+ LF + ER V N
Sbjct: 108 NGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGY 167
Query: 93 ----------FVFKAVGWLGEVKKGEKVHGYVVKTGLE-----FDTYVCNSIMDMYGVLG 137
VF + +V + YV + +E F + +++ +LG
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLG 227
Query: 138 ------KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
KI ++ FD M +DVVSWN I+G+ + + ++A +F + + D
Sbjct: 228 GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-----SPVQDVF 282
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
T + +S + +E +E+ ++ E + NA+L Y + + A+ELFD MP
Sbjct: 283 TWTAMVSGYIQNRMVEEAREL---FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+NV W +M++GY CG++ +A++LFD+ P RD V W AMI GY Q EA+ LF +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M+ + ++ + L+ CA + ALE GK +HG + + V AL+ MY KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IE+A ++F E+ KD SW ++I G + +G AL F M G KPDD T + VLSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
CSH GLVD+GR++F TMT+ Y + P +HY C++DLLGRAGLL++A L++ +P E +
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I +G LL A R++GN ++ E A + +E ++S + LL+N+YAS+ RW DV +R
Sbjct: 580 I---WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD----RMAKTLLDSKQNA 607
+M++ GV+KVPG S IEI H F VGD H E EI++ L+ RM K SK +
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSV 696
Query: 608 MEGD 611
+ D
Sbjct: 697 VLHD 700
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 194/412 (47%), Gaps = 66/412 (16%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + ++YN +I + + G F + LF ++ ER + V W
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL-------------VSW 129
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+K GYV L GK ++LF+ MP++DV SWN
Sbjct: 130 NVMIK------GYVRNRNL-----------------GK---ARELFEIMPERDVCSWNTM 163
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
+SG+ + +DA VF RM P++ V ++N ++ + + ++E
Sbjct: 164 LSGYAQNGCVDDARSVFDRM-------PEKNDVSWNALLSAYVQNSKMEEACMLFKSRE- 215
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ + N LL + K + EAR+ FD M ++V+ W ++++GY G++++AR LFD
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
SPV+D+ WTAM++GY+Q +EA LF +M + ++ A+L G Q +E
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMA 331
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K + + ++ +I YA+CG I +A +F ++ ++D SW ++I G + +
Sbjct: 332 KELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS 387
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACS-----------HGGLVDEG 441
G +AL LF QM G + + +F LS C+ HG LV G
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 33/342 (9%)
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
D D+ WNV+IS +++ R +A+ VF+R MP +V L+N E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKR-------MPRWSSVSYNGMISGYLRNGEF-- 111
Query: 211 EIHRYINQEL-EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
E+ R + E+ E + N ++ Y + L +ARELF+ MP ++V W +M+SGY G
Sbjct: 112 ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA--- 326
++ AR +FDR P ++ V W A+++ YVQ ++ +EA LF+ + + LV+
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE-------NWALVSWNC 224
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LL G + + + + +N D V +I YA+ G I++A ++F E +D
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+WT+++ G N + +A ELF +M + +++++ +L+ G ++ + F+
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
M + + +I + G + EA+ L K+P +
Sbjct: 337 VMP-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 8/279 (2%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ ++F + +N T N ++ + G + A+ +F + +++ +I +++
Sbjct: 329 EMAKELFDVMPCRNVSTWNTMIT--GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 386
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G ++L LF ++ G + ++ + ++ G+++HG +VK G E +V
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 446
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGC 184
N+++ MY G I LF EM KD+VSWN I+G+ + E A+ F M R+G
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG- 505
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
L PD+ T+V+ LSAC+ ++ G++ + Q+ P + ++D+ + G L +
Sbjct: 506 -LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 243 ARELFDEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDR 280
A L MP + W +++ G E A D+
Sbjct: 565 AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 40/295 (13%)
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W +S Y+ G+ +A +F R P V + MI+GY++ F+ A LF EM
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----- 121
Query: 318 KPDKFILV--ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
P++ ++ ++ G + L + + + + E D ++ YA+ G ++ A
Sbjct: 122 -PERDLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDA 176
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F + EK+ SW +++ N K+ +A LF + + V C G
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN---------WALVSWNCLLG 227
Query: 436 GLVD-----EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
G V E R+FF++M + + +I ++G +DEA +L + P ++
Sbjct: 228 GFVKKKKIVEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD-- 280
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKI-ESKDSSFHTLLANIYASANRWE 544
V + A++S Y M E+ L +K+ E + S++ +LA Y R E
Sbjct: 281 --VFTWTAMVSG---YIQNRMVEEARELFDKMPERNEVSWNAMLAG-YVQGERME 329
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 214/663 (32%), Positives = 341/663 (51%), Gaps = 106/663 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPET--LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNL 58
T+ K + + I I PET LN L+ ++ G++ YA K+F + P L ++N
Sbjct: 25 FTKAKNLHSHI--IKTLPYPETFLLNNLI--SSYAKLGSIPYACKVFDQMPHPNLYSWNT 80
Query: 59 LIKAFAKKGSFRKSLLLFSKL-RERGVSPDNF---------------TYPFVFKAVGWL- 101
++ A++K G + LF + R GVS ++ Y + K G
Sbjct: 81 ILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFN 140
Query: 102 ----------------GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL 145
G VK G ++HG+VVK G +V + ++DMY +G I +K+
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFED-------------------------------AV 174
FDE+P+K+VV +N I G ++C R ED A+
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAI 260
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDM 233
D+FR M+ NL D+ T S L+AC + L+ GK++H YI + + + +AL+DM
Sbjct: 261 DIFREMKLE-NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDM 319
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
YCKC KN+ + A +F + +++V WTAM+
Sbjct: 320 YCKC---------------KNI----------------KSAEAVFKKMTCKNVVSWTAML 348
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY Q +EAV F +MQ ++PD F L ++++ CA L +LE+G H + +
Sbjct: 349 VGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLI 408
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
V+ AL+ +Y KCG IE + +F E+ KD +WT+++ G A GK N+ + LF M
Sbjct: 409 SFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESM 468
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
++ G KPD +TFIGVLSACS GLV++G + F +M + I P +HY C+IDL RAG
Sbjct: 469 LAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGR 528
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
++EA I K+P + I + LLS+CR YGN+D+G+ A L +++ +++ + LL
Sbjct: 529 IEEARNFINKMPFSPDAIS---WATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLL 585
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+++YA+ +WE+V +R+ M++ G+RK PGCS I+ +H F D S+ +IYS L
Sbjct: 586 SSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSEL 645
Query: 594 DRM 596
+++
Sbjct: 646 EKL 648
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 149/330 (45%), Gaps = 43/330 (13%)
Query: 197 LSACTALKNLELGKEIHRYINQELEFT-PIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L C N K +H +I + L + + N L+ Y K G + A ++FD+MP+ N+
Sbjct: 16 LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNL 75
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
W +++S Y G++ + LFD P RD V W ++I+GY ++V + M
Sbjct: 76 YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM--- 132
Query: 316 RLKPD------KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK- 368
LK D + LL ++ G ++ G+ IHG++ + V + L++MY+K
Sbjct: 133 -LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 369 ------------------------------CGLIEKALEIFYELREKDAASWTSIICGLA 398
CG +E + +F+E+RE+D+ SWTS+I G
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
NG A+++F +M + D TF VL+AC + EG++ + + +
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYKDNI 310
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L+D+ + + AE + +K+ +N
Sbjct: 311 FVASALVDMYCKCKNIKSAEAVFKKMTCKN 340
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 107/268 (39%), Gaps = 53/268 (19%)
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE- 384
ALL C + + K +H +I + + + LI YAK G I A ++F ++
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73
Query: 385 ------------------------------KDAASWTSIICGLAMNGKINKALELFSQMI 414
+D SW S+I G A G I ++++ ++ M+
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 415 --SGGAKPDDITFIGVLSACSHGGLVDEGRRF------FNTMTEVYQIQPKLEHYGCLID 466
G + ITF +L S G V GR+ F M+ V+ P L+D
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSP-------LVD 186
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
+ + G++ A ++ ++P +N V +Y L+ G V+ ++ L ++ +D
Sbjct: 187 MYSKMGMISCARKVFDELPEKN----VVMYNTLIMGLMRCGRVEDSKR---LFFEMRERD 239
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMK 554
S T + + D ++ ++MK
Sbjct: 240 SISWTSMITGFTQNGLDRDAIDIFREMK 267
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/508 (37%), Positives = 304/508 (59%), Gaps = 8/508 (1%)
Query: 108 EKVHGYVVKTGLEF-DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+++H + GL F + + +++ Y LG + +K+F + D D V++ I+ ++
Sbjct: 20 KQIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRDAQKVFGYIQDPDRVTYTSLINLYLS 79
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPI 225
A VF ++ L PD +VV LSAC ++L GK +H I + +L I
Sbjct: 80 TQLPIKAFSVFSKLVNE-GLRPDSHSVVGALSACGKKQDLLNGKLVHGMIFRFQLGANSI 138
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+GNAL+DMYC+ G + A+ +F +M K+V WTS+++G+V C LE AR +FD P R+
Sbjct: 139 VGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGLESARRVFDEMPWRN 198
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWIH 344
V WTAMI GYV+ + +FR+M+ +P VA+L+GCA LGA + G+ +H
Sbjct: 199 DVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVLSGCADLGAHDHGQAVH 258
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
GYI++ + V+ AL++MY+K G +E A++IF L +KD SWT++I + +GK N
Sbjct: 259 GYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKKDVFSWTTMISAHSSHGKGN 318
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
ALE+F M+ G P+D+TF+ VLS CSH GL+ E + FN M + Y +PK+EHYGC+
Sbjct: 319 HALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKLFNGMIQCYGFEPKIEHYGCM 378
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLL RAGLL+EA+ELI +P + + +I + +LLSAC N+ + E + ++E
Sbjct: 379 VDLLCRAGLLEEAKELIDNMPMDPDAVI---WRSLLSACMNQRNLGLAEIAGKKIIELEP 435
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
D + LL+NIY ANR +D +R+ M + V K P CS IE+NG++H+F + +H
Sbjct: 436 HDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKKPACSYIELNGVVHQFHTENATHH 495
Query: 585 EMKEIYSMLDRMAKTL-LDSKQNAMEGD 611
+IY +L+ + + L LD+ + +E D
Sbjct: 496 ASTKIYMLLEMINEHLRLDTDYSLLEMD 523
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 192/428 (44%), Gaps = 66/428 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQI AQ GL + L +V + GN A+K+FG IQ P + Y LI
Sbjct: 16 LVTLKQIHAQALTQGLLFIEQPLACKLV-NRYAKLGNPRDAQKVFGYIQDPDRVTYTSLI 74
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ K+ +FSKL G+ PD+ + A G ++ G+ VHG + + L
Sbjct: 75 NLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLLNGKLVHGMIFRFQLG 134
Query: 121 FDTYVCNSIMDMYGVLGKI---------------------------CN----VKKLFDEM 149
++ V N+++DMY G+I CN +++FDEM
Sbjct: 135 ANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGLESARRVFDEM 194
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P ++ V+W I+G+V+ +++FR+M+ P T V+ LS C L + G
Sbjct: 195 PWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVLSGCADLGAHDHG 254
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ +H YI++ L+ + NAL+DMY K GC+ A ++FD + K+V WT+M+S + +
Sbjct: 255 QAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKKDVFSWTTMISAHSSH 314
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G + + A+ +F +M + P+ + +L
Sbjct: 315 G-------------------------------KGNHALEVFYDMLESGVIPNDVTFLLVL 343
Query: 329 TGCAQLGAL-EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKD 386
+GC+ G L E K +G I ++++ + GL+E+A E+ + + D
Sbjct: 344 SGCSHSGLLVEANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPD 403
Query: 387 AASWTSII 394
A W S++
Sbjct: 404 AVIWRSLL 411
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 310/601 (51%), Gaps = 87/601 (14%)
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
LR R V+P+N+T+PF KA L + G +H + + GL+ D +V +++DMY
Sbjct: 2 LRHR-VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTL 197
+ + +F MP +D+V+WN ++G+ + AV M+ Q L P+ T+V+ L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 198 SACTALKNLELGKEIHRYI---------NQELEFTP--IMGNALLDMYCKCGCLSEAREL 246
L G +H Y N + + T ++G ALLDMY KCG L AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR---------SPVR------------- 284
FD MP +N + W++++ G+V C ++ +A LF SP
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 285 ------------------DIVLWTAMINGYVQFNRFDEAVALFRE--------------- 311
D+ ++++ Y + D+A+ALF E
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300
Query: 312 ----------------MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
MQ ++PD +V+L+ C+ L AL+ G+ HG + + +
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ ALI+MYAKCG I+ + ++F + +D SW ++I G ++G +A LF +M +
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G PD +TFI +LSACSH GLV EG+ +F+ M Y + P++EHY C++DLL R G LD
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA E I+ +P + V ++ ALL ACR+Y N+D+G+K++ +++++ + + LL+N
Sbjct: 481 EAYEFIQSMPLRAD---VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 537
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IY++A R+++ VR K G +K PGCS IEING +H F+ GD SH + EIY LD
Sbjct: 538 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 597
Query: 596 M 596
+
Sbjct: 598 I 598
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 183/365 (50%), Gaps = 40/365 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG---VSPDNFTYP 92
G+LLYA ++F ++ + + ++ LI F ++ LLF + +G +SP +
Sbjct: 172 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS- 230
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
+A L ++ GE++H + K+G+ D NS++ MY G I LFDEM K
Sbjct: 231 -ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK 289
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
D VS++ +SG+V+ R E+A VF++M Q CN+ PD T+VS + AC+ L L+ G+
Sbjct: 290 DTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRCS 348
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H I + L + NAL+DMY KCG + +R++F+ MP+++++ W +M++GY
Sbjct: 349 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY------ 402
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
I+G + EA ALF EM + PD + LL+ C
Sbjct: 403 --------------------GIHGLGK-----EATALFLEMNNLGFPPDGVTFICLLSAC 437
Query: 332 AQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAAS 389
+ G + +GK W H + +T ++++ ++ G +++A E + D
Sbjct: 438 SHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRV 497
Query: 390 WTSII 394
W +++
Sbjct: 498 WVALL 502
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/655 (30%), Positives = 348/655 (53%), Gaps = 78/655 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
++Q KQ+ I +G +Q+P + KL+ F T + L A I + L +NLLI
Sbjct: 109 LSQGKQLHTLIISLGFEQHPIIVPKLVTFYT--NFDLLADAHTITENSNILHPLPWNLLI 166
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
++ + G ++L + ++ +G+ PD FTYP V KA G ++ G+K+H + + L
Sbjct: 167 SSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLG 226
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH---------------- 164
++ +V NS++ MY G++ + LF+ M ++D VSWN ISG+
Sbjct: 227 WNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKM 286
Query: 165 -------------------VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
V+ FE+A+++ MR M T++ L AC+ +
Sbjct: 287 RVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIG-LGACSHIGA 345
Query: 206 LELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN-KNVICWTSMVSG 264
++LG+EIH G+A+ R +D + N KN ++++
Sbjct: 346 IKLGREIH-------------GSAI-------------RSFYDGVDNVKN-----ALITM 374
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
Y C L A +LF + ++I+ W +M++GY +R +EA LFREM + ++P+ +
Sbjct: 375 YSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTI 434
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELR 383
++L CA++ L+ GK H YI D ++ +L++MYA+ G + +A +F +
Sbjct: 435 ASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSIS 494
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+D ++TS+I G + G+ +AL+LF +M KPD +T + VLSACSH GLV EG +
Sbjct: 495 RRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIK 554
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
F M Y I P+LEH+ C++DL GRAGLL +A+E+I ++P + ++ LL AC
Sbjct: 555 LFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSS---AMWATLLGAC 611
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
RI+GN ++GE A L ++ ++S ++ L+AN+YA+A W + VR M+++GVRK PG
Sbjct: 612 RIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAPG 671
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS----KQNAMEGDNLV 614
C+ +++ FLV D S + ++Y +L+ + + + D+ K+N D+++
Sbjct: 672 CAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMKDAEYVGKENVGSVDDVI 726
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 74/208 (35%), Gaps = 30/208 (14%)
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
L +L QGK +H I ++ L+ Y L+ A I W
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF-------- 444
+I NG +AL + QM G +PD T+ VL AC + G++
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 445 -------FNTMTEVYQIQPKLEHYGCLID-LLGR--------------AGLLDEAEELIR 482
N++ +Y +L CL + +L R G+ EA EL
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFG 284
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVD 510
K+ E E+ + + + C GN +
Sbjct: 285 KMRVEGIELNIITWNTIAGGCVQSGNFE 312
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 299/494 (60%), Gaps = 16/494 (3%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK--ICNVKKLFDEMPDKDVVSWNVSI 161
+++ +++H +++ +GL ++ +Y + + + LFD + +N
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMF 60
Query: 162 SGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
+ A+ + R M R G PD T L AC+AL +L G+E+H Q L
Sbjct: 61 RVYAASPTPLHALLLHRHMLRHGPP--PDTYTFPFLLKACSALAHLPKGQELH---CQAL 115
Query: 221 EF----TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
+F + N+L+ +Y + AR +FD M +++ WT++++ Y N ++ AR
Sbjct: 116 KFGLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARK 175
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
+FD P R ++ ++AMI YV+ NRF EA+ LFRE+ ++++P ++++L CA LGA
Sbjct: 176 VFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGA 235
Query: 337 LEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
L+ G+W++ Y+ +++ VD+ +ATALI+M+ KCG IE AL +F +EK WT+++
Sbjct: 236 LDVGRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLS 295
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
GLAM+G + +E F +M+ G KP+ +TF+ +LS CSH GLV+EG +F+ M + ++
Sbjct: 296 GLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVE 355
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P +EH+GC++DLLGRAGL+D+A +LI ++P E N I +G+LL+ACR+Y NV++GE
Sbjct: 356 PTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAI---WGSLLNACRVYKNVEIGELA 412
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A L K E + + + L ++Y A RW++V V+ KMKE+G RK PGCS IE+ GI +E
Sbjct: 413 AQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYE 472
Query: 576 FLVGDPSHSEMKEI 589
F+VGD SH EI
Sbjct: 473 FVVGDKSHPCAVEI 486
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 227/489 (46%), Gaps = 74/489 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M + K++ A + GL Q L KL+ T S +L +A +F +I P YN +
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMF 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ +A + +LLL + G PD +T+PF+ KA L + KG+++H +K GL
Sbjct: 61 RVYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFGLG 120
Query: 121 FDTYVCNSIMDMYG----------------------------VLGKICNVK---KLFDEM 149
+V NS++ +YG C+VK K+FDEM
Sbjct: 121 GHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFDEM 180
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P++ V+S++ I+ +V+ RF +A+D+FR + + P + V+S L AC L L++G
Sbjct: 181 PERSVISYSAMIAAYVRGNRFREALDLFRELFS-VKIEPSDSCVMSVLCACANLGALDVG 239
Query: 210 KEIHRYINQEL--EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
+ ++ Y+ Q + AL+DM+ KCG + A +F+ K+V WT+M+SG
Sbjct: 240 RWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAM 299
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G E+ + F++ M++ V KP+ VAL
Sbjct: 300 HGLGEQLIEAFEK-----------MVDSGV--------------------KPNGVTFVAL 328
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELR-E 384
L+GC+ G + +G + + E+ V+ V ++++ + GLI++A+++ E+ E
Sbjct: 329 LSGCSHSGLVNEGLYYFDRM-ESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFE 387
Query: 385 KDAASWTSII--CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+AA W S++ C + N +I EL +Q + + ++ +LS G DE
Sbjct: 388 PNAAIWGSLLNACRVYKNVEIG---ELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVE 444
Query: 443 RFFNTMTEV 451
+ M EV
Sbjct: 445 KVKLKMKEV 453
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 322/599 (53%), Gaps = 49/599 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLN-----KLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ + AQ+ GL +PE L + C P A ++F + + +A+N L
Sbjct: 245 RAVHAQLAARGL--SPEALAATALANMYAKCRRPGD-----ARRVFDRMPARDRVAWNAL 297
Query: 60 IKAFAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ +A+ G ++ + +++E G PD T V A + +VH + V+ G
Sbjct: 298 VAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGG 357
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ V +I+D+Y G + + +K+FD M D++ VSWN I G+ + +A+ +F+
Sbjct: 358 FDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFK 417
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC 237
RM G + + +V++ L AC L L+ G+ +H + + LE + NAL+ MYCK
Sbjct: 418 RM-VGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCK- 475
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
C + + A +FD + V W AMI G
Sbjct: 476 ------------------------------CKRTDLAAQVFDELGYKTRVSWNAMILGCT 505
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q ++AV LF MQ+ +KPD F LV+++ A + Q +WIHGY + D
Sbjct: 506 QNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVY 565
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V TALI+MYAKCG + A +F R++ +W ++I G +G A+ELF +M S G
Sbjct: 566 VLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSG 625
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
P++ TF+ VLSACSH GLVDEG+ +F++M E Y ++P +EHYG ++DLLGRAG L EA
Sbjct: 626 KVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEA 685
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
I+K+P E + +YGA+L AC+++ NV++ E+ A + ++E ++ +H LLANIY
Sbjct: 686 WSFIQKMPMEPG---ISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIY 742
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
A+A+ W+DV VR M++ G++K PG S +++ IH F G +H + K+IY+ L ++
Sbjct: 743 ANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKL 801
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 214/663 (32%), Positives = 339/663 (51%), Gaps = 80/663 (12%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI + + G Q+ L+ F T H + A +F +Q + +I ++K
Sbjct: 162 QIHGLVVKGGYVQDVYVCTSLIDFYT--KHACIDDARLLFDGLQVKTSFTWTTIIAGYSK 219
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+G + SL LF +++E V PD + V A L ++ G+++H YV+++G+ D +
Sbjct: 220 QGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSM 279
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGC 184
N +D Y K+ +KLFD M DK+VVSW I+G ++ DA+D+F M R G
Sbjct: 280 VNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGW 339
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY----------------------------- 215
N PD S L++C +L LE G+++H Y
Sbjct: 340 N--PDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDA 397
Query: 216 ---INQELEFTPIMGNALLDMYCKCGCLSEARELFDEM----PNKNVICWTSM------- 261
N + NA+++ Y + L EA +LF EM + ++ + S+
Sbjct: 398 RKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASL 457
Query: 262 ----------------------------VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
+ Y C ++ AR +F+ +DIV+WTAM
Sbjct: 458 YHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMF 517
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+GY Q + +E++ L++ +Q+ RLKP++F A++T + + +L G+ H + +
Sbjct: 518 SGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFD 577
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
D VA L++MYAK G IE+A + F KD A W S+I A +G+ KAL++F M
Sbjct: 578 DDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDM 637
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
I G KP+ +TF+GVLSACSH GL+D G F++M++ + I+P +EHY C++ LLGRAG
Sbjct: 638 IMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGK 696
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA+E I K+P + ++ + +LLSACR+ GNV++G A + DS + LL
Sbjct: 697 LYEAKEFIEKMPIKQAAVV---WRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLL 753
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NI+AS W +V +R+KM GV K PGCS IE+N IH+F+ D +H + I +L
Sbjct: 754 SNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVL 813
Query: 594 DRM 596
D +
Sbjct: 814 DNL 816
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 210/428 (49%), Gaps = 37/428 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYNLLIKAF 63
K+I ++I G ++ L ++ S NL+ +A K+F ++ L+ ++ ++ +
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAY--SKLNLVNHANKLFDTMSHKNLVTWSSMVSMY 115
Query: 64 AKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
++L+LF + +R P+ + V +A G + ++HG VVK G D
Sbjct: 116 THHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQD 175
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
YVC S++D Y I + + LFD + K +W I+G+ K R + ++ +F +M++
Sbjct: 176 VYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKE 235
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLS 241
G ++ PD+ + S LSAC LK LE GK+IH Y+ + + M N +D Y KC +
Sbjct: 236 G-HVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQ 294
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
R+LFD M +KNV+ WT++++G C Q RD D
Sbjct: 295 LGRKLFDRMVDKNVVSWTTVIAG---CMQNSFHRDALD---------------------- 329
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
LF EM + PD F ++L C L ALE+G+ +H Y + I D V
Sbjct: 330 ------LFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNG 383
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MYAKC + A ++F + D S+ ++I G + K+ +AL+LF +M + P
Sbjct: 384 LIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPT 443
Query: 422 DITFIGVL 429
+ F+ +L
Sbjct: 444 LLIFVSLL 451
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 216/488 (44%), Gaps = 72/488 (14%)
Query: 108 EKVHGYVVKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+K+H +V G + D ++ N+++ Y L + + KLFD M K++V+W+ +S +
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM 226
+A+ +F + + CN P+E + S + ACT L +IH + +
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLV--------VK 169
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
G + D+Y +C TS++ Y ++ AR LFD V+
Sbjct: 170 GGYVQDVY---------------------VC-TSLIDFYTKHACIDDARLLFDGLQVKTS 207
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
WT +I GY + R ++ LF +M+ + PDK++L ++L+ C L LE GK IH Y
Sbjct: 208 FTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCY 267
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
+ + I +D + I+ Y KC ++ ++F + +K+ SWT++I G N A
Sbjct: 268 VLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDA 327
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSH--------------------------GGLVD- 439
L+LF +M G PD VL++C GL+D
Sbjct: 328 LDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDM 387
Query: 440 --------EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
+ R+ FN M + L Y +I+ R L EA +L R++ +
Sbjct: 388 YAKCDSLTDARKVFNLMAAI-----DLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSP 442
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVR 550
+ ++ +LL ++++ ++ L+ K S D + L ++Y+ +R D V
Sbjct: 443 TLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVF 502
Query: 551 QKMKEMGV 558
+++++ +
Sbjct: 503 EEIQDKDI 510
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/566 (35%), Positives = 313/566 (55%), Gaps = 37/566 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + ++++N ++ A+ G ++ +F ++++ G+ PD+ TY +
Sbjct: 472 GSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
G ++ +VH + V+TGL D V ++ + MY G I + + LFD++ + V
Sbjct: 532 NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVT 591
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
+WN I G + +A+ +F +M R+G +PD T ++ LSA + LE KE+H
Sbjct: 592 TWNAMIGGAAQQRCGREALSLFLQMQREG--FIPDATTFINILSANVDEEALEWVKEVHS 649
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ +GNAL+ Y KC G ++ A
Sbjct: 650 HATDAGLVDLRVGNALVHTYSKC-------------------------------GNVKYA 678
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+ +FD R++ WT MI G Q +A + F +M + PD V++L+ CA
Sbjct: 679 KQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAST 738
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
GALE K +H + + D V AL+ MYAKCG I+ A +F ++ E+D SWT +I
Sbjct: 739 GALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMI 798
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
GLA +G+ +AL+ F +M S G KP+ +++ VL+ACSH GLVDEGRR F +MT+ Y I
Sbjct: 799 GGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGI 858
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
+P +EHY C++DLLGRAGLL+EAE I +P E ++ P +GALL AC YGN++M E
Sbjct: 859 EPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDD--AP-WGALLGACVTYGNLEMAEF 915
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
A K++ K +S + LL+NIYA+ +WE VR M+ G+RK PG S IE++ IH
Sbjct: 916 AAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIH 975
Query: 575 EFLVGDPSHSEMKEIYSMLDRMAKTL 600
F+VGD SH E KEIY+ L+ + + L
Sbjct: 976 SFVVGDTSHPESKEIYAQLNDLIERL 1001
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 219/438 (50%), Gaps = 47/438 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
KQ+ I + G++QN NKL+ + C G L A ++F + + + +I
Sbjct: 138 KQVHVCIIKSGMEQNLYVANKLLRVYIRC-----GRLQCARQVFDKLLKKNIYIWTTMIG 192
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A+ G ++ ++ K+R+ P+ TY + KA +K G+K+H +++++G +
Sbjct: 193 GYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQS 252
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
D V ++++MY G I + + +FD+M +++V+SW V I G R ++A +F +M
Sbjct: 253 DVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQ 312
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
R+G +P+ T VS L+A + LE KE+H + +N L +GNAL+ MY K G
Sbjct: 313 REG--FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGS 370
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ +AR +FD M +++ WT M I G Q
Sbjct: 371 IDDARVVFDGMTERDIFSWTVM-------------------------------IGGLAQH 399
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALL--TGCAQLGALEQGKWIHGYINENRITVDAV 357
R EA +LF +MQ P+ +++L + A ALE K +H + E D
Sbjct: 400 GRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLR 459
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ALI MYAKCG I+ A +F + ++D SW +++ GLA NG ++A +F QM G
Sbjct: 460 IGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEG 519
Query: 418 AKPDDITFIGVLSACSHG 435
PD T++ +L+ +HG
Sbjct: 520 LVPDSTTYLSLLN--THG 535
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 189/358 (52%), Gaps = 34/358 (9%)
Query: 78 KLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL 136
K+R ++G++ D+F+Y + + ++ ++VH ++K+G+E + YV N ++ +Y
Sbjct: 107 KIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRC 166
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVST 196
G++ +++FD++ K++ W I G+ + EDA+ V+ +MRQ C P+E T +S
Sbjct: 167 GRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-QPNEITYLSI 225
Query: 197 LSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L AC NL+ GK+IH +I Q + + AL++MY KCG + +A+ +FD+M +NV
Sbjct: 226 LKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNV 285
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
I WT M+ G + G R EA LF +MQ
Sbjct: 286 ISWTVMIGGLAHYG-------------------------------RGQEAFHLFLQMQRE 314
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
P+ + V++L A GALE K +H + + +D V AL+ MYAK G I+ A
Sbjct: 315 GFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDA 374
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+F + E+D SWT +I GLA +G+ +A LF QM G P+ T++ +L+A +
Sbjct: 375 RVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASA 432
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 207/434 (47%), Gaps = 45/434 (10%)
Query: 5 KQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
K+I A I Q G Q + L + V C G++ A+ IF + ++++ ++I
Sbjct: 239 KKIHAHIIQSGFQSDVRVETALVNMYVKC-----GSIEDAQLIFDKMVERNVISWTVMIG 293
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A G +++ LF +++ G P+++TY + A G ++ ++VH + V GL
Sbjct: 294 GLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLAL 353
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
D V N+++ MY G I + + +FD M ++D+ SW V I G + R ++A +F +M
Sbjct: 354 DLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQ 413
Query: 181 RQGCNLMPDEGTVVSTL--SACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKC 237
R GC +P+ T +S L SA + LE K +H++ + + + +GNAL+ MY KC
Sbjct: 414 RNGC--LPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKC 471
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G ++ AR +FD RD++ W AM+ G
Sbjct: 472 -------------------------------GSIDDARLVFDGMCDRDVISWNAMMGGLA 500
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q EA +F +MQ L PD ++LL ALE +H + E + D
Sbjct: 501 QNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFR 560
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V +A I MY +CG I+ A +F +L + +W ++I G A +AL LF QM G
Sbjct: 561 VGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREG 620
Query: 418 AKPDDITFIGVLSA 431
PD TFI +LSA
Sbjct: 621 FIPDATTFINILSA 634
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 152/310 (49%), Gaps = 36/310 (11%)
Query: 171 EDAVDVFR-RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGN 228
+DAV + + R++QG + D + V+ L C +++ L K++H I +E + N
Sbjct: 100 KDAVAMLKIRVQQGIAI--DSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVAN 157
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
LL +Y + CG+L+ AR +FD+ ++I +
Sbjct: 158 KLLRVY-------------------------------IRCGRLQCARQVFDKLLKKNIYI 186
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
WT MI GY ++ ++A+ ++ +M+ +P++ +++L C L+ GK IH +I
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHII 246
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
++ D V TAL+ MY KCG IE A IF ++ E++ SWT +I GLA G+ +A
Sbjct: 247 QSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 306
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF QM G P+ T++ +L+A + G ++ + + + L L+ +
Sbjct: 307 LFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA-GLALDLRVGNALVHMY 365
Query: 469 GRAGLLDEAE 478
++G +D+A
Sbjct: 366 AKSGSIDDAR 375
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 4/247 (1%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
T+ GN+ YA+++F + + + ++I A+ G + F ++ G+ PD T
Sbjct: 668 TYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATT 727
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
Y + A G ++ ++VH + V GL D V N+++ MY G I + + +FD+M
Sbjct: 728 YVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMV 787
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
++DV SW V I G + R +A+D F +M+ P+ + V+ L+AC+ ++ G+
Sbjct: 788 ERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSE-GFKPNGYSYVAVLTACSHAGLVDEGR 846
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVN 267
+ Q+ P M + ++D+ + G L EA MP + W +++ V
Sbjct: 847 RQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVT 906
Query: 268 CGQLEKA 274
G LE A
Sbjct: 907 YGNLEMA 913
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 299/543 (55%), Gaps = 48/543 (8%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N LI+ A S R +L F+ +R V PD +T+P V KA G + G VH V
Sbjct: 81 WNTLIRLHAP-ASPRNALAYFACMRRAAVEPDAYTFPAVLKACA-CGVL--GLPVHAEAV 136
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
+TG++ D + N+++ Y +G + +K+FD +D+VSWN ++G+V C E A +
Sbjct: 137 RTGMDGDLFTRNALVSFYCRIGDCRSGRKVFDHGA-RDLVSWNSMVAGYVACGELELAQE 195
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+F M + S T ++D Y
Sbjct: 196 LFDGM-----------PLRDAFSWAT----------------------------MIDAYG 216
Query: 236 K-CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
K G + ARELFDE PN++++CW SM+ GY G++++AR LF+ P R+++ W+ +++
Sbjct: 217 KRSGGVDRARELFDETPNRDLVCWCSMIDGYARQGRMDEARALFEEMPERNVISWSIVVD 276
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GYV+ EA+ LF+ M +KPD+ V T CAQLGALEQG+W+H Y+ + ++
Sbjct: 277 GYVRCGEPSEALELFQRMLRCGIKPDRVAAVGAFTACAQLGALEQGRWLHSYLEKKKVLF 336
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D VV TALI+MY KCG ++ IF + +K +W +I GL + A++LF QM
Sbjct: 337 DVVVQTALIDMYMKCGRLDLGKLIFESMPDKSVVTWNVMIIGLGTHSCGLHAVKLFYQME 396
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
+ GA DD++ + VL+AC+H GL+ EG F+ M + + + PK+EHYG L+DLLGRAG L
Sbjct: 397 AEGAPIDDLSVLAVLTACTHAGLISEGLGIFHRMRKDFGMDPKVEHYGALVDLLGRAGHL 456
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
D A I +P E L+G+LL+ACR + V++ E L + + D + LL+
Sbjct: 457 DHARHAIETMPMEPTP---ELWGSLLAACRSHRCVELAELSVERLASLGADDFGVYVLLS 513
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA W+ V +R+ M G++K G S IE++G HEF+ G SHS E++ ML
Sbjct: 514 NIYADEGMWDGVFRIRRLMSAEGMKKDIGRSVIEVDGQTHEFVNGGSSHSCKDEVHLMLQ 573
Query: 595 RMA 597
++
Sbjct: 574 NLS 576
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 296/540 (54%), Gaps = 40/540 (7%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTG 118
I+A + G L S L +P + T+PF K+ L + + G ++H +K
Sbjct: 50 IRALSSSGLHLHVLRFHSHLP----NPSHLTFPFAIKSASRLPDPLTAGAQLHARSLKLP 105
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEM-PDKDVVSWNVSISGHVKCMRFEDAVDVF 177
+ +V S++++Y G++ + +K FDEM VSW I+ ++ R +A+ V
Sbjct: 106 SHSNPHVLTSLLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVA 165
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
R + PD T V L+AC + +L G+E+ +E I GN
Sbjct: 166 RSAF-ASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKE----GIAGN--------- 211
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
V T+ V YV CG+++KAR +FD+ +D+V W AM+ GY
Sbjct: 212 -----------------VFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYA 254
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
EA+ LF MQ+ ++PD + + L+ C +LGAL+ G+ + G + + + + V
Sbjct: 255 SNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNPV 314
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ TALI+MYAKCG +A +F ++R +D W ++I GL M G A L QM G
Sbjct: 315 LGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQMKKSG 374
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+D TFIG+L +C+H GLV +GRR+F MT++Y I+P++EHYG ++DLL RAGLL EA
Sbjct: 375 MTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQEA 434
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
+LI+ +P E N ++ +GALL C+I+ N D+ E + L ++E +S + +L+NIY
Sbjct: 435 HQLIQDMPMEANAVV---WGALLGGCKIHRNADLAEHVLKQLIQLEPWNSGNYVVLSNIY 491
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+++ RWED +R +MK GV KVP S +E++G +HEF VGD SH +IY+ LD +
Sbjct: 492 SNSGRWEDAAKLRLEMKAKGVEKVPASSWVELDGKVHEFHVGDKSHPLSDQIYAKLDELG 551
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 192/418 (45%), Gaps = 38/418 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI-QSPCLLAYNLL 59
+T Q+ A+ ++ NP L L+ + G L A+K F + Q P +++ L
Sbjct: 91 LTAGAQLHARSLKLPSHSNPHVLTSLLNL--YARCGRLHDAQKAFDEMRQPPSTVSWTAL 148
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I A+ G +++ + GV PD+FT V A + ++ GE+V K G+
Sbjct: 149 ITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGI 208
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ +V + +D+Y G++ + +FD+M +KDVV+W + G+ +A+++F
Sbjct: 209 AGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFA 268
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCG 238
M Q + PD TV LSACT L L+LG+ + + E+ P++G AL+DMY KCG
Sbjct: 269 M-QVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCG 327
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
EA +F +M N+++I W +M+ G G EK
Sbjct: 328 STGEAWMVFQKMRNRDIIVWNAMILGLGMTGH-EKI------------------------ 362
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAV 357
A AL +M+ + + + LL C G ++ G ++ I
Sbjct: 363 ------AFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIE 416
Query: 358 VATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMI 414
++++ ++ GL+++A ++ ++ E +A W +++ G ++ + A + Q+I
Sbjct: 417 HYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVLKQLI 474
>gi|28558786|gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo subsp. melo]
Length = 565
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 326/571 (57%), Gaps = 28/571 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LKQI + + + + +N ++L+ FC + G++ YA +F + +N +I
Sbjct: 18 MKELKQIHSLMIKTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQTDQLTVYVWNSMI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K + G +L ++ +++ +G PD+FT+PFV K + + G+ VH +VKTG E
Sbjct: 78 KGYCNGGDKFGALFMYEEMQRKGFYPDHFTFPFVLKVCSAIDLLVYGQSVHNRIVKTGFE 137
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D Y + +++MY G + + K+F+ +P +VV+W I+G V + ++A+ +F+ M
Sbjct: 138 LDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNNDQPKEALRLFKDM 197
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
+ + P+E T+ + L+A +++ GK + RY ++L P N+
Sbjct: 198 -ENEGVEPNEITMTTALAAAARCRDIHTGKLV-RYRLRQLGLDPFHTNSRF--------- 246
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
NVI T+++ Y CG+L AR+LFD+ P R++V+W +MI+ + Q+
Sbjct: 247 -------------NVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQYG 293
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
R EA+ LF +M++ P+K ++++ C L G+ +H + + + T
Sbjct: 294 RGAEALRLFVDMELAGFVPNKATFLSVIRACTHLRFRSTGQSLHARVLKANFHEFVAIGT 353
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAK 419
AL++MYAK G + AL+IF +LR+KD +WT++I GLA+ GK +AL +F +M
Sbjct: 354 ALMDMYAKSGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVA 413
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD IT+I VL ACSH GLV+EG++ F +M EVY I+P +EHYGC+IDLL RAG +EAEE
Sbjct: 414 PDQITYIAVLWACSHLGLVEEGQKHFTSMMEVYGIEPTMEHYGCMIDLLSRAGHSEEAEE 473
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
L+ K+P + N I+ ++L+ C +YGNV + ++ + + ++++ S + LL+NI+A
Sbjct: 474 LLVKMPTQPNATIL---SSILNGCEMYGNVGLANRVKSHIVELKNSSSGVYVLLSNIHAK 530
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
A WE++ R +K + K G S +E+N
Sbjct: 531 ACNWEEMKLARDILKHKKIGKTLGNSFVEMN 561
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 303/558 (54%), Gaps = 37/558 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F +Q L+++ L+ +A+ G +++L L +++E G PD+ T + AV
Sbjct: 199 AYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVAD 258
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ ++ G +HGY ++G E V N+++DMY G + +F M K VVSWN
Sbjct: 259 MKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTM 318
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
I G + E+A F +M + P T++ L AC L +LE G +H+ +++ +
Sbjct: 319 IDGCAQNGESEEAFATFLKMLDEGEV-PTRVTMMGVLLACANLGDLERGWFVHKLLDKLK 377
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L+ + N+L+ MY KC + A +F+ + NV
Sbjct: 378 LDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVT----------------------- 414
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
W AMI GY Q EA+ LF MQ +K D F LV ++T A Q
Sbjct: 415 ---------WNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQ 465
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
KWIHG + + V+TAL++MYAKCG I+ A ++F ++E+ +W ++I G
Sbjct: 466 AKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGT 525
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G + L+LF++M G KP+DITF+ V+SACSH G V+EG F +M E Y ++P ++
Sbjct: 526 HGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMD 585
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY ++DLLGRAG LD+A I+++P + + + GA+L AC+I+ NV++GEK A L
Sbjct: 586 HYSAMVDLLGRAGQLDDAWNFIQEMPIKPG---ISVLGAMLGACKIHKNVELGEKAAQKL 642
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
K++ + +H LLANIYAS + W+ V VR M++ G+ K PGCS +E+ IH F G
Sbjct: 643 FKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSG 702
Query: 580 DPSHSEMKEIYSMLDRMA 597
+H E K+IY+ L+ +
Sbjct: 703 STNHPESKKIYAFLETLG 720
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 42/381 (11%)
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+++K G + ++ ++ G ++F+ + K V +++ + G+ K D
Sbjct: 69 FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128
Query: 173 AVDVFRRMRQGCNLMPDE-----GTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG 227
A+ F RM M DE G L C +L+ G+EIH I
Sbjct: 129 ALCFFLRM------MCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLI----------- 171
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
++ E N+ T+++S Y C Q++ A +F+R +D+V
Sbjct: 172 ------------ITNGFE-------SNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLV 212
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
WT ++ GY Q A+ L +MQ KPD LV++L A + AL G+ IHGY
Sbjct: 213 SWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYA 272
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ V AL++MY KCG A +F +R K SW ++I G A NG+ +A
Sbjct: 273 FRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAF 332
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
F +M+ G P +T +GVL AC++ G ++ G F + + + ++ + LI +
Sbjct: 333 ATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG-WFVHKLLDKLKLDSNVSVMNSLISM 391
Query: 468 LGRAGLLDEAEELIRKIPNEN 488
+ +D A + + N
Sbjct: 392 YSKCKRVDIAASIFNNLEKTN 412
>gi|326520249|dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 300/539 (55%), Gaps = 44/539 (8%)
Query: 101 LGEVKK-GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP--------- 150
LG+V+ G H ++KT L T + N ++++Y +L + F+++P
Sbjct: 44 LGDVRYLGRAAHALLLKTALNHHTLLSNRLIELYAMLNSPAASRTAFEDLPYRNAHSYNN 103
Query: 151 -------------------------DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
++VVS+N IS + R +A+ VF R+ +
Sbjct: 104 LLAALSRGSATLPDALHLLDAMPASSRNVVSYNTIISALARNGRQGEALRVFARLARDRC 163
Query: 186 LMP----DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCL 240
L P D VVS SAC + L +E+H + +E T IM NA++D Y K G +
Sbjct: 164 LGPEVALDRFAVVSVASACAGMGALRPLREMHGAVVVSGVEVTVIMANAMVDAYSKAGRM 223
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR LF++M ++ + WTSM++GY +L++A +F P +D + WTA+I+G+ Q
Sbjct: 224 EDARTLFNQMSIQDTVSWTSMIAGYCRAKRLDEAIRVFHMMPEQDTIAWTALISGHEQNG 283
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV--- 357
D A+ LF++M + + P F LV+ L CA+LG + +G+ +HG+I RI +D
Sbjct: 284 EEDAALDLFQQMLVEGMAPTPFALVSSLGACAKLGLVTRGREVHGFILRRRIGLDPFNIF 343
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ALI+MY+KCG + A+ +F + E+D SW S++ G + NG+ ++L +F +M+
Sbjct: 344 IHNALIDMYSKCGDMATAMLVFARMSERDFISWNSMVTGFSHNGQGKQSLAMFKRMLDAE 403
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P +TF+ VL+ACSH GLV +GRR +M + + ++P+ EHY ID LGR L+EA
Sbjct: 404 VQPTYVTFLAVLTACSHAGLVTDGRRILESM-QYHGVEPRAEHYASFIDALGRNHQLEEA 462
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
E I+ + + +GALL ACR++GN ++ EK+A L ++E +S + +L+NIY
Sbjct: 463 SEFIKGLSSRIGPGTTGSWGALLGACRVHGNTEIAEKVAESLFQLEPGNSGRYVMLSNIY 522
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
A+A +W+D +R MKE G+RK CS IE+ H F+ D SH E EIY MLDR+
Sbjct: 523 AAAGQWDDARRIRAIMKEKGLRKDQACSWIEVRSAKHMFVADDTSHCEANEIYGMLDRL 581
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 193/444 (43%), Gaps = 81/444 (18%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSP----DNFTYPFVFKAVGWLGEVKKG 107
+++YN +I A A+ G ++L +F++L R+R + P D F V A +G ++
Sbjct: 132 VVSYNTIISALARNGRQGEALRVFARLARDRCLGPEVALDRFAVVSVASACAGMGALRPL 191
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
++HG VV +G+E + N+++D Y G++ + + LF++M +D VSW I+G+ +
Sbjct: 192 REMHGAVVVSGVEVTVIMANAMVDAYSKAGRMEDARTLFNQMSIQDTVSWTSMIAGYCRA 251
Query: 168 MRFEDAVDVFRRMRQGCN------------------------------LMPDEGTVVSTL 197
R ++A+ VF M + + P +VS+L
Sbjct: 252 KRLDEAIRVFHMMPEQDTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSL 311
Query: 198 SACTALKNLELGKEIHRYINQEL----EFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
AC L + G+E+H +I + F + NAL+DMY KCG ++ A +F M +
Sbjct: 312 GACAKLGLVTRGREVHGFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSER 371
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+ I W SMV+G+ + GQ + +++A+F+ M
Sbjct: 372 DFISWNSMVTGFSHNGQGK-------------------------------QSLAMFKRML 400
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
++P +A+LT C+ G + G+ I + + + A + I+ + +E
Sbjct: 401 DAEVQPTYVTFLAVLTACSHAGLVTDGRRILESMQYHGVEPRAEHYASFIDALGRNHQLE 460
Query: 374 KALEIFYELREK----DAASWTSIICGLAMNGKI---NKALELFSQMISGGAKPDDITFI 426
+A E L + SW +++ ++G K E Q+ G + ++
Sbjct: 461 EASEFIKGLSSRIGPGTTGSWGALLGACRVHGNTEIAEKVAESLFQLEPGNSG----RYV 516
Query: 427 GVLSACSHGGLVDEGRRFFNTMTE 450
+ + + G D+ RR M E
Sbjct: 517 MLSNIYAAAGQWDDARRIRAIMKE 540
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + +A+ LI + G +L LF ++ G++P F A
Sbjct: 257 AIRVFHMMPEQDTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLGACAK 316
Query: 101 LGEVKKGEKVHGYVV--KTGLE-FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
LG V +G +VHG+++ + GL+ F+ ++ N+++DMY G + +F M ++D +SW
Sbjct: 317 LGLVTRGREVHGFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERDFISW 376
Query: 158 NVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
N ++G + + ++ +F+RM + P T ++ L+AC+ + G+ I
Sbjct: 377 NSMVTGFSHNGQGKQSLAMFKRMLDA-EVQPTYVTFLAVLTACSHAGLVTDGRRI 430
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 343/643 (53%), Gaps = 53/643 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNK-LMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
K I Q+ G + + K LM++ +L YA K+F + L A+N +I A+
Sbjct: 91 KSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAY 150
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
A+ + ++ +F ++ + GV PDNFT+ + G L G++VH ++ G + DT
Sbjct: 151 ARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDT 210
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N+++DMY + K+FDEM +++ V+WN IS + F DA+ +F RM++
Sbjct: 211 FVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQES 270
Query: 184 CN-LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLS 241
+ + PD+ T + L+ C +N G++IH + I + I+ L+ MY +CG L+
Sbjct: 271 EDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLN 330
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR----DIVLWTAMINGYV 297
A+E+F+ M +N W SM+ GY G+ ++A LF + + D ++M++ V
Sbjct: 331 YAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 390
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH------------- 344
+ + L + ++ + + V L+ A+ G+++ ++
Sbjct: 391 SLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALW 450
Query: 345 -----GYIN---------------ENRITVDA----------VVATALIEMYAKCGLIEK 374
GY N E+ I D V+ TAL++MY+KCG I K
Sbjct: 451 NSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITK 510
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
A +F + K+ SW ++I G + +G +AL L+ +M G P+++TF+ +LSACSH
Sbjct: 511 ARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSH 570
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP 494
GLV+EG R F +M E Y I+ K EHY C++DLLGRAG L++A+E + K+P E V
Sbjct: 571 TGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPE---VS 627
Query: 495 LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMK 554
+GALL ACR++ ++DMG A L +++ ++ + +++NIYA+A RW++V ++RQ MK
Sbjct: 628 TWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMK 687
Query: 555 EMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
GV+K PG S IEIN I F G +H + +EIY+ L +
Sbjct: 688 MKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLT 730
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 210/435 (48%), Gaps = 61/435 (14%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSWNVSI 161
++G+ +H ++ G D Y+ I+ +Y G L +C +KLF+EMP++++ +WN I
Sbjct: 88 QRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMI 147
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQEL 220
+ + + +A +F RM + + PD T S L C AL++ + GK++H + I
Sbjct: 148 LAYARVDDYMEAWGIFDRMLK-IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGF 206
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ +GNAL+DMY KC ++FDEM +N + W S++S
Sbjct: 207 KGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS----------------- 249
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR--LKPDKFILVALLTGCAQLGALE 338
QF F++A+ LF MQ ++PD+F LLT CA
Sbjct: 250 --------------AEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDN 295
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
QG+ IH ++ IT + +V T L+ MY++CG + A EIF + E++A SW S+I G
Sbjct: 296 QGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQ 355
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
NG+ +AL LF QM G KPD + +LS+C +GR N + ++ +
Sbjct: 356 QNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHN-----FIVRNTM 410
Query: 459 EHYG----CLIDLLGRAGLLDEA----EELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
E G L+D+ + G +D A ++ I+K N L+ ++L+ Y N
Sbjct: 411 EEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRN------TALWNSILAG---YANKG 461
Query: 511 M-GEKLAALLEKIES 524
+ E LE +ES
Sbjct: 462 LKKESFNHFLEMLES 476
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK---ALEIFYEL 382
+L+ C + ++GK IH + N DA + T ++ +YA+ G ++ A ++F E+
Sbjct: 76 SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
E++ +W ++I A +A +F +M+ G PD+ TF L C D G+
Sbjct: 136 PERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 195
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD-----EAEELIRKIPNENNEIIVPLYG 497
Q+ KL G D L+D + EE K+ +E E +
Sbjct: 196 ----------QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWN 245
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDS------SFHTLLA 534
+++SA +G+ + + L L ES+D +F TLL
Sbjct: 246 SIISAEAQFGHFN--DALVLFLRMQESEDGIQPDQFTFTTLLT 286
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/460 (38%), Positives = 276/460 (60%), Gaps = 9/460 (1%)
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
++ + VSW I+ + R +A F MR + P+ T ++ LS C + +
Sbjct: 22 LNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLA-GVEPNHITFIALLSGCGDVSS 80
Query: 206 LE--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
LG +H Y + L+ T +M G A+L MY K G +AR +FD M +KN + W +M
Sbjct: 81 GSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTM 140
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ GY+ GQ+ A LFD P RD++ WTAMING+V+ +EA+A FREMQI +KPD
Sbjct: 141 IDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDY 200
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
++A L C LGAL G W+H Y+ + V+ +LI++Y +CG +E A E+F +
Sbjct: 201 VAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDK 260
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ ++ SW S+I G A NG +++L F +M G KPD +TF G L+ACSH GLV+EG
Sbjct: 261 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 320
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
R+F TM ++I P++EHYGCL+DL RAG L++A +++ +P + NE+++ G+LL+
Sbjct: 321 LRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVI---GSLLA 377
Query: 502 ACRIYG-NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
ACR +G N + E+L L + K S + +L+N+YA+ WE + +R+KMK +G++K
Sbjct: 378 ACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGIWEGASKMRRKMKGLGLKK 437
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PG SS+EI+ H F+ GD +H E I +L+ ++ L
Sbjct: 438 QPGFSSVEIDDCTHVFMAGDSAHVETAYIREVLELISSDL 477
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 171/365 (46%), Gaps = 68/365 (18%)
Query: 50 SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL--GEVKKG 107
S +++ I ++ G ++ FS +R GV P++ T+ + G + G G
Sbjct: 27 SETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEALG 86
Query: 108 EKVHGYVVKTGLE--------------------------FD------TYVCNSIMDMYGV 135
+ +HGY K GL+ FD + N+++D Y
Sbjct: 87 DLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMR 146
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
G++ N KLFDEMP++D++SW I+G VK E+A+ FR M Q + PD +++
Sbjct: 147 SGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREM-QISGVKPDYVAIIA 205
Query: 196 TLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L+ACT L L G +HRY+ NQ+ + + N+L+D+YC+CGC+ ARE+FD+M +
Sbjct: 206 ALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRT 265
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
V+ W S++ G+ G E++ FR+MQ
Sbjct: 266 VVSWNSVIVGFAANGNAH-------------------------------ESLVYFRKMQE 294
Query: 315 IRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
KPD LT C+ +G +E+G ++ ++RI+ L+++Y++ G +E
Sbjct: 295 EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLE 354
Query: 374 KALEI 378
AL +
Sbjct: 355 DALNV 359
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 4/238 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + L+++ +I F KKG ++L F +++ GV PD
Sbjct: 148 GQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAAL 207
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G VH YV+ + + V NS++D+Y G + +++FD+M + VV
Sbjct: 208 AACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVV 267
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G +++ FR+M++ PD T L+AC+ + +E G +
Sbjct: 268 SWNSVIVGFAANGNAHESLVYFRKMQEE-GFKPDAVTFTGALTACSHVGLVEEGLRYFQT 326
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQ 270
+ ++ +P + + L+D+Y + G L +A + MP K N + S+++ N G
Sbjct: 327 MKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRNHGN 384
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/567 (33%), Positives = 318/567 (56%), Gaps = 14/567 (2%)
Query: 28 VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPD 87
+ + +G+L A F ++ ++ +I AFA+ G ++ L+ ++ E+ V+
Sbjct: 402 ILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA-- 459
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD 147
T + A +G ++K + + L + N+I+ Y G + K LF
Sbjct: 460 --TKTAMMTAYAQVGRIQKARLIFDEI----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQ 513
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+MP K+ SW I+G V+ +A+++ + + ++ P + + S LSAC + ++E
Sbjct: 514 KMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV-PSDSSFTSALSACANIGDVE 572
Query: 208 LGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
+G+ IH I +F + N L+ MY KCG + + +F + K+ + W S++SG
Sbjct: 573 IGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLS 632
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
L+ AR +F++ P RD+V WTA+I+ YVQ + A+ LF +M +KP++ + +
Sbjct: 633 ENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTS 692
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LL+ C LGA++ G+ H I + V +LI MY KCG E +F E+ E D
Sbjct: 693 LLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY-EDGFCVFEEMPEHD 751
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+W +++ G A NG +A+++F QM G PD ++F+GVL ACSH GLVDEG FN
Sbjct: 752 LITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFN 811
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+MT+ Y I P + HY C++DLLGRAG L EAE LI +P + + +I + ALL ACRI+
Sbjct: 812 SMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVI---WEALLGACRIH 868
Query: 507 GNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
NV++G+++A L ++ S+ + LL+N++AS W+ V +R+ MK+ G+ K PG S
Sbjct: 869 RNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISW 928
Query: 567 IEINGIIHEFLVGDPSHSEMKEIYSML 593
I++ +H F+ GD +H +++EIYS L
Sbjct: 929 IQVKNKLHCFVTGDRTHDQIEEIYSAL 955
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 194/435 (44%), Gaps = 70/435 (16%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + +++ ++I + + ++ +F K+ PD + V A+
Sbjct: 314 ARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITG 373
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L +++ + +KTG E D V ++I++ Y G + F+ MP+++ SW
Sbjct: 374 LDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTM 433
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I+ +C R +DA+ ++ R +P++ T
Sbjct: 434 IAAFAQCGRLDDAIQLYER-------VPEQTVATKT------------------------ 462
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
A++ Y + G + +AR +FDE+ N NV+ W ++++GY G L++A+DLF +
Sbjct: 463 --------AMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQK 514
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
PV++ W AMI G+VQ EA+ L E+ P + L+ CA +G +E G
Sbjct: 515 MPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+ IH + ++ V LI MYAKCG +E +F +R KD SW S+I GL+ N
Sbjct: 575 RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSEN 634
Query: 401 -------------------------------GKINKALELFSQMISGGAKPDDITFIGVL 429
G AL+LF M++ G KP+ +T +L
Sbjct: 635 YMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLL 694
Query: 430 SACSHGGLVDEGRRF 444
SAC + G + G +F
Sbjct: 695 SACGNLGAIKLGEQF 709
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 246/491 (50%), Gaps = 57/491 (11%)
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+ CN+ + G LG++ +++F+EM +DVVSWN I+G+ + + ++A +F G
Sbjct: 172 FQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF-VG 230
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
N+ T L+ +E +E+ + E + NA++ Y + G L A
Sbjct: 231 KNIR----TWTILLTGYAKEGRIEEAREVFESMT---ERNVVSWNAMISGYVQNGDLKNA 283
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R+LFDEMP KNV W S+V+GY +C ++ +AR+LFD+ P R+ V W MI+GYV + +
Sbjct: 284 RKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYW 343
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA +F +M +PD+ I V +L+ L LE + + D VV +A++
Sbjct: 344 EAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAIL 403
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
Y + G ++ A+ F + E++ SWT++I A G+++ A++L+ ++ P+
Sbjct: 404 NAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV------PEQT 457
Query: 424 --TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
T +++A + G + + R F+ + + P + + +I + G+L EA++L
Sbjct: 458 VATKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLF 512
Query: 482 RKIPNENN--------------------EIIVPL-----------YGALLSACRIYGNVD 510
+K+P +N+ E+++ L + + LSAC G+V+
Sbjct: 513 QKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVE 572
Query: 511 MGEKLAALLEKIESKDSSF-HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI 569
+G + +L K + +S+ L ++YA ED ++V + ++ V+ +S+ I
Sbjct: 573 IGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR---VKDTVSWNSL-I 628
Query: 570 NGIIHEFLVGD 580
+G+ +++ D
Sbjct: 629 SGLSENYMLDD 639
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 243/579 (41%), Gaps = 139/579 (24%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F + ++++N +I +++ G ++ LLF + + T+ +
Sbjct: 185 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWTILL 240
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
G +++ + V ++ E + N+++ Y G + N +KLFDEMP+K+V
Sbjct: 241 TGYAKEGRIEEARE----VFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA 296
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM--RQGCNLM-------------------------- 187
SWN ++G+ C R +A ++F +M R + M
Sbjct: 297 SWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTV 356
Query: 188 --PDEGTVVSTLSACTALKNLEL-GKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
PD+ V LSA T L +LEL G I E ++G+A+L+ Y + G L A
Sbjct: 357 ARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAM 416
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
F+ MP +N WT+M++ + CG+L+ A L++R P + + TAM+ Y Q R +
Sbjct: 417 HFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQK 476
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A +F E+ L P+ A++ G
Sbjct: 477 ARLIFDEI----LNPNVVAWNAIIAG---------------------------------- 498
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
Y + G++++A ++F ++ K++ASW ++I G N + +ALEL ++ G+ P D +
Sbjct: 499 -YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSS 557
Query: 425 FIGVLSACSHGGLVDEGR---------------RFFNTMTEVYQIQPKLE---------- 459
F LSAC++ G V+ GR N + +Y +E
Sbjct: 558 FTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR 617
Query: 460 -----HYGCLIDLLGRAGLLDEAEELIRKIPNEN----------------NEIIVPLY-- 496
+ LI L +LD+A + K+P + E+ + L+
Sbjct: 618 VKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLD 677
Query: 497 -------------GALLSACRIYGNVDMGEKLAALLEKI 522
+LLSAC G + +GE+ AL+ K+
Sbjct: 678 MLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKL 716
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 210/498 (42%), Gaps = 101/498 (20%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
NP + + + +G L A+ +F + ++ +I F + R++L L +
Sbjct: 486 NPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIE 545
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
L G P + ++ A +G+V+ G +H +KTG +F++YV N ++ MY G
Sbjct: 546 LHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGN 605
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ---------------- 182
+ + +F + KD VSWN ISG + +DA VF +M +
Sbjct: 606 VEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQA 665
Query: 183 --------------GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM-- 226
+ P++ TV S LSAC L ++LG++ H I + L F +
Sbjct: 666 GHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFK-LGFDTFLFV 724
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
GN+L+ MY KCG + +F+EMP ++I W +++ G C Q
Sbjct: 725 GNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVG---CAQ---------------- 764
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
NG + EA+ +F +M++ + PD+ + +L C+ G +++G W H
Sbjct: 765 -------NGLGK-----EAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEG-WAH-- 809
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
M K G+ + + Y +T ++ L G +++A
Sbjct: 810 ---------------FNSMTQKYGI----MPLVYH--------YTCMVDLLGRAGYLSEA 842
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L M KPD + + +L AC V+ G+R + ++ +PK Y L +
Sbjct: 843 EALIENM---PVKPDSVIWEALLGACRIHRNVELGQRVAERLFQM--TKPKSATYVLLSN 897
Query: 467 LLGRAGLLDEAEELIRKI 484
L G+ D+ E IRK+
Sbjct: 898 LFASQGMWDKVAE-IRKL 914
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 137/337 (40%), Gaps = 71/337 (21%)
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
E P ++ + + G++E+AR +F+ RD+V W +MINGY Q + DEA L
Sbjct: 165 ETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLL 224
Query: 309 FREMQIIRLKPDKFI------LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
F D F+ LLTG A+ G +E+ + + + E + V A+
Sbjct: 225 F----------DAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNV----VSWNAM 270
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ---------- 412
I Y + G ++ A ++F E+ EK+ ASW S++ G ++++A ELF Q
Sbjct: 271 ISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWM 330
Query: 413 -MISGG--------------------AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
MISG A+PD F+ VLSA + GL D + +
Sbjct: 331 VMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT--GLDD-----LELIGSL 383
Query: 452 YQIQPKLEHYG------CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
I K + G +++ R G LD A +P N + A R+
Sbjct: 384 RPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRL 443
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+ L E++ + + T + YA R
Sbjct: 444 -------DDAIQLYERVPEQTVATKTAMMTAYAQVGR 473
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/599 (33%), Positives = 328/599 (54%), Gaps = 44/599 (7%)
Query: 3 QLKQIQAQIFQ--IGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
LKQI + I + L++L+ C + YA ++ +Q+ + ++ LI
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAA-TQFRYARRLLCQLQTLSIQLWDSLI 74
Query: 61 KAFAKKGSF--RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
F+ + R S L + +R GV P T+P + KAV L + + H ++VK G
Sbjct: 75 GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFG 133
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
L+ D +V NS++ Y G +LFD DKDVV+W I G V+ +A+ F
Sbjct: 134 LDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFV 193
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQ-ELEFTPIMGNALLDMYCK 236
M++ + +E TVVS L A ++++ G+ +H Y+ ++ +G++L+DMY K
Sbjct: 194 EMKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C C + A+ +FD P R++V WTA+I GY
Sbjct: 253 CSCYDD-------------------------------AQKVFDEMPSRNVVTWTALIAGY 281
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ FD+ + +F EM + P++ L ++L+ CA +GAL +G+ +H Y+ +N I ++
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
T LI++Y KCG +E+A+ +F L EK+ +WT++I G A +G A +LF M+S
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS 401
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
P+++TF+ VLSAC+HGGLV+EGRR F +M + ++ K +HY C++DL GR GLL+E
Sbjct: 402 HVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEE 461
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A+ LI ++P E ++ +GAL +C ++ + ++G+ A+ + K++ S +TLLAN+
Sbjct: 462 AKALIERMPMEPTNVV---WGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANL 518
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS-EMKEIYSMLD 594
Y+ + W++V VR++MK+ V K PG S IE+ G + EF+ D E ++Y LD
Sbjct: 519 YSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLD 577
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/368 (43%), Positives = 245/368 (66%), Gaps = 4/368 (1%)
Query: 225 IMGNALLDMYCK-CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
++ NAL+ ++ G L++ L + + ++++ Y G+L AR LFD P
Sbjct: 112 LVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPA 171
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
R+ V W+AM+NGYVQ EA+ +F MQ ++PD +LV +L CAQ GALEQGKW+
Sbjct: 172 RNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWV 231
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
HGY+ + I ++ TAL++MY+KCG ++ A+++F ++ K+ +WT++I GLAM+G+
Sbjct: 232 HGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRG 291
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
++A+ LF+QM S G +PDDI FIGVL AC+H GLVD+GR F++M Y I+PK+EHYGC
Sbjct: 292 SEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGC 351
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLL R G L EA+E+I+K+P E + +I +GAL++ CR + NV+ E +A +E
Sbjct: 352 MVDLLARNGFLYEAKEMIQKMPMEPDALI---WGALMAGCRFHKNVEFAEYVAKHWILLE 408
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
S + LL+NIYA++ R +R M+E GV K PGCS++E+NG+IH+F+VGD SH
Sbjct: 409 PDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSH 468
Query: 584 SEMKEIYS 591
+K+I S
Sbjct: 469 PRIKDILS 476
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 71/380 (18%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGE----KVH 111
++ LI+A ++ +L L++ L G+ P T P + K++ V VH
Sbjct: 40 HDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVH 99
Query: 112 GYVVKTGLE--------------------------------FDTYVCNSIMDMYGVLGKI 139
+ VK GL+ D N+++ Y G++
Sbjct: 100 THAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRL 159
Query: 140 CNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSA 199
+ + LFDEMP ++ VSW+ ++G+V+ +A+ +F RM Q ++ PD+ +V L+A
Sbjct: 160 ADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARM-QAEDVRPDDTVLVGVLAA 218
Query: 200 CTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
C LE GK +H Y+ ++ G AL+DMY KCG + A ++F+ M KNV+ W
Sbjct: 219 CAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAW 278
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
T+M+ G G R EAV LF +M+ ++
Sbjct: 279 TTMIKGLAMHG-------------------------------RGSEAVMLFAQMESSGIR 307
Query: 319 PDKFILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
PD + +L C G +++G+ + + + I ++++ A+ G + +A E
Sbjct: 308 PDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKE 367
Query: 378 IFYEL-REKDAASWTSIICG 396
+ ++ E DA W +++ G
Sbjct: 368 MIQKMPMEPDALIWGALMAG 387
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 128/249 (51%), Gaps = 6/249 (2%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+ T N L+ + G L A +F + + ++++ ++ + + G R++L +F++
Sbjct: 142 DASTFNTLIT--AYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFAR 199
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
++ V PD+ V A G +++G+ VHGY+ G++ + + +++DMY G+
Sbjct: 200 MQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGE 259
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
+ +F+ M K+V++W I G R +AV +F +M + + PD+ + L
Sbjct: 260 VQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQM-ESSGIRPDDIAFIGVLC 318
Query: 199 ACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNV 255
ACT ++ G+E+ + ++ P + + ++D+ + G L EA+E+ +MP +
Sbjct: 319 ACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDA 378
Query: 256 ICWTSMVSG 264
+ W ++++G
Sbjct: 379 LIWGALMAG 387
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 182/504 (36%), Positives = 289/504 (57%), Gaps = 29/504 (5%)
Query: 103 EVKKGEKVHGYVVKTGL----EFDTYVCNSIMDMYGVLGKICNVK------------KLF 146
+K+ +VH + + TGL + + +I+ + L N +F
Sbjct: 27 SLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALTGYALSVF 86
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
+ +P+ +N I H A+ +F RMR+ ++ PD T L AC+ L L
Sbjct: 87 NRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRR-LSVPPDTHTFPFCLKACSLLPAL 145
Query: 207 ELGKEIHRYINQELEF----TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
L + +H +Q +F + N L+ +Y L A ++F+E K+V+ + +++
Sbjct: 146 SLAQTLH---SQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNALI 202
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF-DEAVALFREMQIIRLKPDK 321
G++ G ++AR LFD+ P+RD V W ++ GY Q +A+ LF M I ++PD
Sbjct: 203 GGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVRPDN 262
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
LV+ L+ CAQLG LEQGK IH YI +NRI ++A ++T L+++YAKCG IE A EIF
Sbjct: 263 IALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETAREIFES 322
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+K+ +W +++ GL M+G+ + +L FS+MI G KPD ++F+G+L C H GLV E
Sbjct: 323 SPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCEA 382
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
R FF M VY++ +L+HYGC+ DLLGRAGL+ EA E+I ++P + V ++G +L
Sbjct: 383 RNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGD---VFVWGGVLG 439
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
CRI+GNV++ EK A + + +D ++++A+IYA+A RWEDV +R+ M V+K
Sbjct: 440 GCRIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVKKN 499
Query: 562 PGCSSIEI-NGIIHEFLVGDPSHS 584
PGCS +++ NG+ H F+ G S S
Sbjct: 500 PGCSLVQLNNGVFHGFVAGSASSS 523
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 176/408 (43%), Gaps = 79/408 (19%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
YA +F I +P YN +I+A S +L++F ++R V PD T+PF KA
Sbjct: 81 YALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKACS 140
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV---LGKICNV-------------- 142
L + + +H K G D +VCN+++ +Y V L C V
Sbjct: 141 LLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNA 200
Query: 143 --------------KKLFDEMPDKDVVSWNVSISGHVK----CMRFEDAVDVFRRMRQGC 184
++LFD+MP +D VSW ++G+ + CM DA+ +F RM
Sbjct: 201 LIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCM---DAIQLFNRMLIS- 256
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD +VS LSAC L LE GK IH YI Q + + L+D+Y KCGC+ A
Sbjct: 257 TVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETA 316
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
RE+F+ P+KN+ W +++ G G+ G++ + F
Sbjct: 317 REIFESSPDKNLFTWNALLVGLGMHGR------------------------GHLSLHYFS 352
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE----NRITVDAVVA 359
+ +KPD + +L GC G + + + + E R+ +
Sbjct: 353 RMIE-------AGIKPDGVSFLGILVGCGHAGLVCEAR---NFFQEMEVVYRVPRELKHY 402
Query: 360 TALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKA 406
+ ++ + GLI +A+E+ + D W ++ G ++G + A
Sbjct: 403 GCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVLGGCRIHGNVEIA 450
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 140/339 (41%), Gaps = 58/339 (17%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
D T+V+T A T ++ + K++H ++ I L ++ L+ F
Sbjct: 8 DGNTIVNTSEAITVIRQCKSLKQLH-----QVHAHTITTGLLWGLHHSSLLLTNILTAFT 62
Query: 249 E-MPNKNVICWT-SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
+P N T + ++GY A +F+R P + MI + + A+
Sbjct: 63 ALLPTTNASPTTPAALTGY--------ALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAAL 114
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG--------------------- 345
+F M+ + + PD L C+ L AL + +H
Sbjct: 115 VIFVRMRRLSVPPDTHTFPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVY 174
Query: 346 -----------YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
NE + D V ALI + K G ++A +F ++ +DA SW +++
Sbjct: 175 SVNKHLHHACQVFNETSLK-DVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLL 233
Query: 395 CGLAMNGKI-NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
G A +G + A++LF++M+ +PD+I + LSAC+ G +++G+ VY
Sbjct: 234 AGYAQSGDLCMDAIQLFNRMLISTVRPDNIALVSALSACAQLGELEQGKSI-----HVYI 288
Query: 454 IQPKLEHYG----CLIDLLGRAGLLDEAEELIRKIPNEN 488
Q ++ L+DL + G ++ A E+ P++N
Sbjct: 289 KQNRIPINAFLSTGLVDLYAKCGCIETAREIFESSPDKN 327
>gi|297844718|ref|XP_002890240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336082|gb|EFH66499.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 206/646 (31%), Positives = 338/646 (52%), Gaps = 52/646 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQ---SPCLLAYNLL 59
Q KQ+ AQ+ +L V + G LL A +F ++ L +N +
Sbjct: 71 QCKQVHAQVLVSDYIYRSGSLAANFV-SVYSRLGLLLDARNVFETVSLVLWSDLRLWNSI 129
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+KA G + + L+ +RERG++ D F P + +A +LG H V++ GL
Sbjct: 130 LKANVSHGLYENAFELYRGMRERGLTGDGFILPLILRACRYLGRFGLCRAFHSQVIQIGL 189
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG---------------- 163
+ + +V N ++ +Y +I + LF EMP ++ +SWNV I G
Sbjct: 190 KENLHVANELLTLYPKAARIGDAYNLFVEMPVRNRMSWNVMIKGFSQEFDCESAVKIFEW 249
Query: 164 -------------------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
H +C +FED + F MR + + E V S C L
Sbjct: 250 MQREDFKPDEVTWTSLLSCHSQCGKFEDVIKYFHVMRMSASAVSGEALAV-FFSVCAELG 308
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
L + ++H + I E NAL+ +Y K G + +A +LF ++ NK + W S+++
Sbjct: 309 ALSIADKVHGFVIKGGFEECLPSRNALIHVYGKQGKVKDAEQLFRQIRNKGIESWNSLIT 368
Query: 264 GYVNCGQLEKARDLF-------DRSPVR-DIVLWTAMINGYVQFNRFDEAVALFREMQII 315
+V+ G+L++A LF D V+ ++V WT++I G R D ++ FR MQ
Sbjct: 369 SFVDAGKLDEALSLFTELEEMDDVCNVKANVVTWTSVIKGCNVQGRGDYSLEYFRRMQFS 428
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
++ + + +L+ CA+L AL G+ IHG++ ++ + +V AL+ MY KCGL+ +
Sbjct: 429 KVLSNSVTICCILSICAELPALNLGREIHGHVIRTSMSDNILVQNALVNMYTKCGLLREG 488
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F +R+KD SW SII G M+G KAL +F +MI G PD I + VLSACSH
Sbjct: 489 SLVFEAIRDKDLISWNSIIKGYGMHGFGEKALSMFDRMIKSGCHPDGIALVAVLSACSHA 548
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
GLV++GR+ F +M++ + ++P+ EHY C++DLLGR G L EA E+++ +P E V +
Sbjct: 549 GLVEKGRKIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPK---VCV 605
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
GALL++CR++ N+D+ E +A+ L +E + + + LL+NIY++ RWE+ VR K+
Sbjct: 606 LGALLNSCRMHKNMDIAEIIASQLRVLEPERTGSYMLLSNIYSAGGRWEESAKVRALAKK 665
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
++KV G S IE+ I++F G SE IY +L+ + ++
Sbjct: 666 KDLKKVSGSSWIELKKKIYKFSSGSIVQSEFASIYPVLEDLVSHMV 711
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 310/601 (51%), Gaps = 87/601 (14%)
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
LR R V+P+N+T+PF KA L + G +H + + GL+ D +V +++DMY
Sbjct: 2 LRHR-VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTL 197
+ + +F MP +D+V+WN ++G+ + AV M+ Q L P+ T+V+ L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 198 SACTALKNLELGKEIHRYI---------NQELEFTP--IMGNALLDMYCKCGCLSEAREL 246
L G +H Y N + + T ++G ALLDMY KCG L AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR---------SPVR------------- 284
FD MP +N + W++++ G+V C ++ +A LF SP
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 285 ------------------DIVLWTAMINGYVQFNRFDEAVALFRE--------------- 311
D+ ++++ Y + D+A+ALF E
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300
Query: 312 ----------------MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
MQ ++PD +V+L+ C+ L AL+ G+ HG + + +
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ ALI+MYAKCG I+ + ++F + +D SW ++I G ++G +A LF +M +
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G PD +TFI +LSACSH GLV EG+ +F+ M Y + P++EHY C++DLL R G LD
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA E I+ +P + V ++ ALL ACR+Y N+D+G+K++ +++++ + + LL+N
Sbjct: 481 EAYEFIQSMPLRAD---VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 537
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IY++A R+++ VR K G +K PGCS IEING +H F+ GD SH + EIY LD
Sbjct: 538 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 597
Query: 596 M 596
+
Sbjct: 598 I 598
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 183/365 (50%), Gaps = 40/365 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG---VSPDNFTYP 92
G+LLYA ++F ++ + + ++ LI F ++ LLF + +G +SP +
Sbjct: 172 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS- 230
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
+A L ++ GE++H + K+G+ D NS++ MY G I LFDEM K
Sbjct: 231 -ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK 289
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
D VS++ +SG+V+ R E+A VF++M Q CN+ PD T+VS + AC+ L L+ G+
Sbjct: 290 DTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRCS 348
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H I + L + NAL+DMY KCG + +R++F+ MP+++++ W +M++GY
Sbjct: 349 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY------ 402
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
I+G + EA ALF EM + PD + LL+ C
Sbjct: 403 --------------------GIHGLGK-----EATALFLEMNNLGFPPDGVTFICLLSAC 437
Query: 332 AQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAAS 389
+ G + +GK W H + +T ++++ ++ G +++A E + D
Sbjct: 438 SHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRV 497
Query: 390 WTSII 394
W +++
Sbjct: 498 WVALL 502
>gi|242059435|ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 300/548 (54%), Gaps = 31/548 (5%)
Query: 34 SHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPF 93
S L+A + S P A+ L++ +A + R++ L++++ R P
Sbjct: 3 SRARQLHAIYMTTSSHDPDKWAH--LVREYASQSLLREAALVYARNVPRRTHHQPL-LPI 59
Query: 94 VFKAVGWLGEVKKG--EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ KA + G + +H +K+ D V +I+ MY G + + ++ FDEMPD
Sbjct: 60 LLKAAATASPAEPGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEMPD 119
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
++V+S+N ++G+ + A+ +F MR T V+ + E
Sbjct: 120 RNVISYNALLAGYAAAGDMDGALALFGGMRS--------WTYVTWATLIRGFAKKGDMAE 171
Query: 212 IHRYINQELEFTP------IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
R+ E TP + L+ Y G + ARE+FD MP +N W+SMV+GY
Sbjct: 172 ARRW----FETTPPGMRTVVTWTVLVHGYVSAGDMEAAREVFDRMPARNAFVWSSMVTGY 227
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G E+A+ +F R P R++V W A+I GY Q ++A+ F M R+KPD+F +
Sbjct: 228 FKAGNAEEAQAVFHRIPTRNLVNWNALIAGYAQIGCSEKALEAFDSMLQERVKPDEFTMA 287
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
+LL+ CAQLG+LEQGK +H +IN I + V LI+MYAKCG + A IF +R K
Sbjct: 288 SLLSACAQLGSLEQGKKVHDFINREHIRKNHFVLNGLIDMYAKCGDLVYARYIFDGMRWK 347
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ W ++I LA +G+ ++AL LF QM G P+ IT + VL AC+HGG VDEG R F
Sbjct: 348 NTECWNTMISALASHGRSDEALHLFFQMEHSGQTPNTITVLAVLGACTHGGFVDEGLRIF 407
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
N + + Y ++ +EHYGCL+DLLGRAG L EA E+++ +P E NE+I +G+LL ACR+
Sbjct: 408 NKL-DAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVKNMPEEPNEVI---WGSLLGACRV 463
Query: 506 YGNVDMGEKLAALLEKIESKDSSF----HTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
+G+ +M + + ++ S +S + +L+NI A++ RWE +R+KM GV K
Sbjct: 464 HGDAEMSRLVTDEIHRLHSVHASSNDAEYIMLSNIMAASKRWEQAEQIRRKMARHGVEKT 523
Query: 562 PGCSSIEI 569
P CSS+E+
Sbjct: 524 PACSSLEL 531
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 163/414 (39%), Positives = 267/414 (64%), Gaps = 6/414 (1%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSE 242
+++PD T L AC L ++ GK IH Q+L F + N +L++Y CG + +
Sbjct: 5 DVLPDTFTCSFVLKACLKLSDVVNGKTIHGLF-QKLGFGSNLFLQNMILNLYGLCGEMGD 63
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A LF++MP ++ + W +++ G ++ A F R P +++ WT+MI+G+VQ +
Sbjct: 64 AMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKP 123
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+EA+ LF +++ ++P++ +V++L CA LG L+ G+ +H Y ++ + V L
Sbjct: 124 NEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTL 183
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MY KCG +E A +FYE+ E+ SW+++I GLAM+G+ +AL LFS+MI G KP+
Sbjct: 184 IDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+TFIG+L ACSH GL+DEGRRFF +MT Y + P++EHYGC++DL RAGLL+EA E I
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFIL 303
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + N ++ +GALL C+++ N+D+ E+ L +++ + ++ +++NIYA A R
Sbjct: 304 SMPIKPNGVV---WGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAER 360
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
WED VR+ MK+ GV+K G SSI +NG++HEF+ GD +H + ++I + D++
Sbjct: 361 WEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKL 414
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 174/369 (47%), Gaps = 66/369 (17%)
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK 138
+R V PD FT FV KA L +V G+ +HG K G + ++ N I+++YG+ G+
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 139 ICNVKKLFDEMPDKD-------------------------------VVSWNVSISGHVKC 167
+ + LF++MP +D V SW ISG V+C
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIM 226
+ +A+D+F ++ + P+E TVVS L+AC L +L+LG+ +H Y + + +
Sbjct: 121 GKPNEAIDLFMKLEDEA-VRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHV 179
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
N L+DMY KCGCL AR +F EM + V+ W++M++G GQ E
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAE-------------- 225
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
EA+ LF EM + +KP+ + LL C+ +G +++G+
Sbjct: 226 -----------------EALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFAS 268
Query: 347 INENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKIN 404
+ + + + +++++++ GL+E+A E + K + W +++ G ++ I+
Sbjct: 269 MTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNID 328
Query: 405 KALELFSQM 413
A E +
Sbjct: 329 LAEEAIKHL 337
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 155/310 (50%), Gaps = 11/310 (3%)
Query: 11 IFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFR 70
+F+ Q++ T N +V G++ A F + + + ++ +I F + G
Sbjct: 67 LFEKMPQRDAVTWN--IVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPN 124
Query: 71 KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
+++ LF KL + V P+ T V A LG++ G VH Y K+G + + +VCN+++
Sbjct: 125 EAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLI 184
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
DMY G + N +++F EM ++ VVSW+ I+G + E+A+ +F M + + P+
Sbjct: 185 DMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIK-LGVKPNG 243
Query: 191 GTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFD 248
T + L AC+ + ++ G+ + + P + + ++D++ + G L EA E
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFIL 303
Query: 249 EMPNK-NVICWTSMVSG---YVNCGQLEKA-RDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
MP K N + W +++ G + N E+A + L + P+ D + + N Y + R++
Sbjct: 304 SMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLND-GYYVVISNIYAEAERWE 362
Query: 304 EAVALFREMQ 313
+A + + M+
Sbjct: 363 DAARVRKLMK 372
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M++ + PD F +L C +L + GK IHG + + + ++ +Y CG
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 372 IEKALEIFYELREKDAAS-------------------------------WTSIICGLAMN 400
+ A+ +F ++ ++DA + WTS+I G
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
GK N+A++LF ++ +P+++T + VL+AC+ G +D GR T+ + +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTK-SGFKRNVHV 179
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
LID+ + G L+ A R++ E E V + A+++ ++G +
Sbjct: 180 CNTLIDMYVKCGCLENA----RRVFYEMEERTVVSWSAMIAGLAMHGQAE 225
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 210/641 (32%), Positives = 328/641 (51%), Gaps = 91/641 (14%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTH------PSHGNLLYAEKIFGSIQSPCLLAY 56
L QI AQ GL + ++L++F T P H +L ++ + P +
Sbjct: 19 HLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSL----RLLHVVHRPNAFSC 74
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV------ 110
N+++KA + G L L++ + +PD +T+ + A +++G +V
Sbjct: 75 NMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRAIEEGRQVHCHAVR 131
Query: 111 HGY-------------------------VVKTGLEFDTYVCNSIM--------------- 130
HG+ V G +D N+I+
Sbjct: 132 HGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGV 191
Query: 131 ----------------DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
++G G + +K+FD + KDV +W IS + +F +A+
Sbjct: 192 FARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEAL 251
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG------N 228
+F MR G DE +V ++AC L+ G+ H L F +G N
Sbjct: 252 ALFSDMR-GEGWPVDEAVMVCVVAACARLEVTRNGEMCH-----GLAFRAGLGSRLNVQN 305
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
AL+ MY + AR LFD + W SM++GY+ G ++ A++LF P +D V
Sbjct: 306 ALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVS 365
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
WT MI+G VQ ++ EA+ +F MQ +KPD+ LV++++ C + +LEQGK +H YI
Sbjct: 366 WTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIR 425
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
E++ T+ ++ T+LI+MY KCG +E ALE+F + E+ W ++I GLAMNG + K+L+
Sbjct: 426 EHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLD 485
Query: 409 LFSQMISGG-AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+FS+M S A P++ITF GVLSAC H GLV+EG+ FF M Y I P + HYGC++DL
Sbjct: 486 MFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDL 545
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG + EAE LI +P + VP +GALL +C +G+ ++GE++ L ++
Sbjct: 546 LGRAGYVKEAENLIESMPMSPD---VPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHD 602
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
FHT+L+NIYAS W+ V ++R MK+ V K+PG S +E
Sbjct: 603 GFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
>gi|357501421|ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365545|gb|ABN09779.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496014|gb|AES77217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 601
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 199/548 (36%), Positives = 306/548 (55%), Gaps = 47/548 (8%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
N +I A F L+++ ++ P ++T+ + K ++G ++HG V+
Sbjct: 91 NTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFTLILKGCSVSDAKRQGFQIHGVVL 150
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K D YV S++DMY G + +K+FDEM + +VSW I G+ +C +A
Sbjct: 151 KNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARK 210
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+F +G V ++A N ++D Y
Sbjct: 211 LF------------DGMVDRDVAAF---------------------------NVMIDGYV 231
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G + AR+LFD+M KNVI WTSMV GY G +++AR LFD P ++++ W AMI G
Sbjct: 232 KMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRG 291
Query: 296 YVQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
Y Q R +A+ LF EM+ + ++ ++ +V++L A L AL+ G W+HG++ N++
Sbjct: 292 YCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDG 351
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
V AL++MYAKCG I KA +F E+ EKD SW ++I G +NG +ALE+F+ M+
Sbjct: 352 SVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMML 411
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
G +P+ IT VLSAC+H GLV+EGRR F M E + I P++EHYGC+IDLLGRAG L
Sbjct: 412 REGFEPNQITMTSVLSACNHCGLVEEGRRCFEAM-ERFGIVPQIEHYGCMIDLLGRAGRL 470
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
DEAE+LI+ +P + NEII+ + L AC + +V E++ + K+E + + + +L
Sbjct: 471 DEAEKLIQAMPYDPNEIILT---SFLFACCYFEDVSRAERILKVAVKMEKEGAGDYVMLR 527
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG--DPSHSEMKEIYSM 592
N+YA+ RW DV +V++ MK+ G K S IE++G EF+ G SHS ++ I S
Sbjct: 528 NLYATERRWADVEDVKEMMKKRGSNKEVAWSVIEVDGRFREFVAGYYSHSHSHLEAIQST 587
Query: 593 LDRMAKTL 600
L ++ K +
Sbjct: 588 LGQLWKHM 595
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 140/307 (45%), Gaps = 71/307 (23%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+++ A K+F + + A+N++I + K G + LF K+R + V
Sbjct: 203 GDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNV----------- 251
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ W VHGY G + + LFD MP+K+V+
Sbjct: 252 --ISWTS------MVHGYSED--------------------GDVDEARFLFDCMPEKNVL 283
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G+ + R DA+ +F MR ++ +E TVVS L A L L+LG +H +
Sbjct: 284 SWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGF 343
Query: 216 INQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + +L+ + + NAL+DMY KCG + +A+ +F+EM K+ W ++++GY
Sbjct: 344 VQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGY--------- 394
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+NG + EA+ +F M +P++ + ++L+ C
Sbjct: 395 -----------------GVNGCAK-----EALEVFAMMLREGFEPNQITMTSVLSACNHC 432
Query: 335 GALEQGK 341
G +E+G+
Sbjct: 433 GLVEEGR 439
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 192/575 (33%), Positives = 314/575 (54%), Gaps = 40/575 (6%)
Query: 1 MTQLKQIQAQIFQIGL---QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q KQIQ+ I GL Q N ++ C S +F +I +P N
Sbjct: 21 LEQCKQIQSIIVTSGLYSTQDNNTLFLTKLLQCVPFSQNQNTCLLLLFDTINTPNTRLLN 80
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+I A + SLL ++KLR++GV PD T+P + K + ++ + K
Sbjct: 81 KMIAACSHP---HISLLCYAKLRQKGVQPDKHTFPLLLKTFS-KSIAQNPFMIYAQIFKL 136
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G + D ++ N+++ + G + + +++FDE P +D V+W I+G+VK +A+ F
Sbjct: 137 GFDLDLFIGNALIPAFANSGFVESARQVFDESPFQDTVAWTALINGYVKNDCPGEALKCF 196
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
+MR + D TV S L A + + + G+ +H + + G LD Y
Sbjct: 197 VKMRLR-DRSVDAVTVASILRAAALVGDADFGRWVHGFYVEA-------GRVQLDGYV-- 246
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
+++++ Y CG E A +F+ P RD+V WT ++ GYV
Sbjct: 247 --------------------FSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYV 286
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q N+F +A+ F +M + P+ F L ++L+ CAQ+GAL+QG+ +H YI N+I ++
Sbjct: 287 QSNKFQDALRAFWDMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYIECNKINMNVT 346
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ TAL++MYAKCG I++AL +F + K+ +WT II GLA++G AL +F M+ G
Sbjct: 347 LGTALVDMYAKCGSIDEALRVFENMPVKNVYTWTVIINGLAVHGDALGALNIFCCMLKSG 406
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P+++TF+GVL+ACSHGG V+EG+R F M Y ++P+++HYGC++D+LGRAG L++A
Sbjct: 407 IQPNEVTFVGVLAACSHGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRAGYLEDA 466
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
+++I +P + + ++ GAL AC ++ +MGE + LL + S + LLAN+Y
Sbjct: 467 KQIIDNMPMKPSPGVL---GALFGACLVHKAFEMGEHIGNLLVNQQPNHSGSYALLANLY 523
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGI 572
WE VR+ MK + V K PG S IE++G
Sbjct: 524 KMCQNWEAAAQVRKLMKGLRVVKAPGYSRIEVDGF 558
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 327/594 (55%), Gaps = 12/594 (2%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
+K + AQ+ ++ + NP+ K ++ ++ G+ A +F L +N ++ F
Sbjct: 439 IKMMHAQMIKLPQKWNPDAAAKNLI-SSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEF 497
Query: 64 -AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ GS L +F +L +GV D+ Y K + ++ G ++HG ++K G + D
Sbjct: 498 KSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLD 557
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
Y+ ++M+ YG + ++F EMP+ + + WN +I +++ + + V++FR+M Q
Sbjct: 558 VYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM-Q 616
Query: 183 GCNLMPDEGTVVSTLSAC-TALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCL 240
L + T+V L A + L L +GKE H Y+ + +G +L+DMY K L
Sbjct: 617 FSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSL 676
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR----DIVLWTAMINGY 296
+ A+ +FD M N+N+ W S+VSGY G E A L ++ D+V W MI+GY
Sbjct: 677 TSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGY 736
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+ EA+A F +MQ + P+ + LL CA L L++GK IH N D
Sbjct: 737 AMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDV 796
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
VATALI+MY+K ++ A ++F ++ K ASW +I G A+ G +A+ +F++M
Sbjct: 797 FVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKV 856
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD ITF +LSAC + GL+ EG ++F++M Y+I P+LEHY C++DLLGRAG LDE
Sbjct: 857 GVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDE 916
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A +LI +P + + I +GALL +CRI+ N+ E A L K+E +S+ + L+ N+
Sbjct: 917 AWDLIHTMPLKPDATI---WGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNL 973
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
Y+ NRWED+ ++R+ M GVR S I+IN +H F + H + +IY
Sbjct: 974 YSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIY 1027
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 210/641 (32%), Positives = 328/641 (51%), Gaps = 91/641 (14%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTH------PSHGNLLYAEKIFGSIQSPCLLAY 56
L QI AQ GL + ++L++F T P H +L ++ + P +
Sbjct: 19 HLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSL----RLLHVVHRPNAFSC 74
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV------ 110
N+++KA + G L L++ + +PD +T+ + A +++G +V
Sbjct: 75 NMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRAIEEGRQVHCHAVR 131
Query: 111 HGY-------------------------VVKTGLEFDTYVCNSIM--------------- 130
HG+ V G +D N+I+
Sbjct: 132 HGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGV 191
Query: 131 ----------------DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
++G G + +K+FD + KDV +W IS + +F +A+
Sbjct: 192 FARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEAL 251
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG------N 228
+F MR G DE +V ++AC L+ G+ H L F +G N
Sbjct: 252 ALFSDMR-GEGWPVDEAVMVCVVAACARLEVTRNGEMCH-----GLAFRAGLGSRLNVQN 305
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
AL+ MY + AR LFD + W SM++GY+ G ++ A++LF P +D V
Sbjct: 306 ALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVS 365
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
WT MI+G VQ ++ EA+ +F MQ +KPD+ LV++++ C + +LEQGK +H YI
Sbjct: 366 WTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIR 425
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
E++ T+ ++ T+LI+MY KCG +E ALE+F + E+ W ++I GLAMNG + K+L+
Sbjct: 426 EHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLD 485
Query: 409 LFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+FS+M S A P++ITF GVLSAC H GLV+EG+ FF M Y I P + HYGC++DL
Sbjct: 486 MFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDL 545
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG + EAE LI +P + VP +GALL +C +G+ ++GE++ L ++
Sbjct: 546 LGRAGYVKEAENLIESMPMSPD---VPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHD 602
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
FHT+L+NIYAS W+ V ++R MK+ V K+PG S +E
Sbjct: 603 GFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 211/607 (34%), Positives = 327/607 (53%), Gaps = 51/607 (8%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPD-----NFTY 91
NL A +F S L+ YN ++ +A+ ++ L F E +PD FT
Sbjct: 492 NLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGF--FMEMQTAPDMIRIDEFTL 549
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY---GVLGKICNV------ 142
+ L + G+++H +++KT + + +S++DMY G + C V
Sbjct: 550 ITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGE 609
Query: 143 ------------------------KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ E+ DVV+WN ISG V+ E+++ +F
Sbjct: 610 VVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFV 669
Query: 179 RM---RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMY 234
RM + G N E T S LSAC+ L++L+LGKE+H Y+ L P + + L+D+Y
Sbjct: 670 RMADEKVGWN----EHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVY 725
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
CKC + A + E+ +NV TSM+ GY + G + +AR LFD ++ V+WTA+
Sbjct: 726 CKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFF 785
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GYV+ + + L E + PD IL++++ CA AL GK IH Y+ I +
Sbjct: 786 GYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKL 845
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D + ++L++MY+KCG I A IF E+ +KD+ + +I G A +G N+A++LF +M+
Sbjct: 846 DTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMV 905
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
G KPD ITF+ +LSAC HGGLV+ G FF++M+ Y I P+++HY C+IDL GRA L
Sbjct: 906 KHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQL 965
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
D+A E +RKIP + + +I +GA L+ACRI GN ++ K L IE ++ S + LA
Sbjct: 966 DKALEFMRKIPIQLDAVI---WGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLA 1022
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
N+YA+ WE++ +R+KMK V+K GCS + + H F+ GD HS+ + IYS L
Sbjct: 1023 NVYAAEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLA 1082
Query: 595 RMAKTLL 601
+ LL
Sbjct: 1083 SLTDELL 1089
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 225/514 (43%), Gaps = 101/514 (19%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ +K G H +K+G ++ N ++ Y G + + +KLFDEMP+++V SWN
Sbjct: 424 MKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAI 483
Query: 161 ISGHVKCMR-------FEDAV-------------------------DVFRRMRQGCNLMP 188
I+ +VK F+ AV F M+ +++
Sbjct: 484 IAAYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIR 543
Query: 189 -DEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDMYCKCGCLSEA-RE 245
DE T+++ L+ L + GK++H ++ + + T ++L+DMY KCG EA R
Sbjct: 544 IDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRV 603
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS-PVRDIVLWTAMINGYVQFNRFDE 304
+ + + +MV+ G+++ A DLF + D+V W MI+G+VQ +E
Sbjct: 604 YYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEE 663
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
++ LF M ++ ++ ++L+ C+ L +L+ GK +H Y+ +NR+ + + + L++
Sbjct: 664 SLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVD 723
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA------------------ 406
+Y KC + A + ELR ++ S TS+I G + G + +A
Sbjct: 724 VYCKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTAL 783
Query: 407 -------------LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-Y 452
EL S+ PD + I ++ AC+ + G++ + M
Sbjct: 784 FFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGI 843
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN---EIIVPLYG------------ 497
++ KL L+D+ + G + AE + R++ ++++ I++ Y
Sbjct: 844 KLDTKLT--SSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLF 901
Query: 498 ----------------ALLSACRIYGNVDMGEKL 515
ALLSACR G V++GE
Sbjct: 902 KEMVKHGFKPDAITFVALLSACRHGGLVELGEHF 935
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 14/304 (4%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
QN ++ ++V + S GN+ A K+F S+ + + L + K L S
Sbjct: 744 QNVYSITSMIV--GYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCEAVFELLS 801
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
+ R+ PD + A + G+++H Y+++ G++ DT + +S++DMY G
Sbjct: 802 EYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCG 861
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
I +++F E+ DKD + +N+ I+G+ +AV +F+ M + PD T V+ L
Sbjct: 862 SIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKH-GFKPDAITFVALL 920
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-N 254
SAC +ELG+ ++ + P + + ++D+Y + L +A E ++P + +
Sbjct: 921 SACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLD 980
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING--YVQFNRFDEAVALFREM 312
+ W + ++ G E AR D +L NG YVQ A + EM
Sbjct: 981 AVIWGAFLNACRINGNAELARK------AEDELLVIEGENGSRYVQLANVYAAEGNWEEM 1034
Query: 313 QIIR 316
IR
Sbjct: 1035 GRIR 1038
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 187/501 (37%), Positives = 286/501 (57%), Gaps = 20/501 (3%)
Query: 109 KVHGYVVKTGL-EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
++HG + K GL ++ +++ Y LG+ + + LFDEMPD +VS H
Sbjct: 32 EIHGLLFKEGLLHAGAHLPTALLSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAAS 91
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL---------GKEIHRYI-N 217
+ A+ VFR M ++PD + L+AC +L GK +H I
Sbjct: 92 GQAAQALAVFRDMIAD-GVLPDNVALAVALAACHTTASLPAAGMAAARRPGKMVHAIIVT 150
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+ + L+ +Y + G L+ +R LFD MP ++ + W +MV Y+ + A +L
Sbjct: 151 SGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGDAYEL 210
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM---QIIRLKPDKFILVALLTGCAQL 334
F P RD+V W MI GY RF EA+ L R+M + P+ + +L CA
Sbjct: 211 FLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAACAGA 270
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE-KDAASWTSI 393
G LE G W+H +++ NR+ D + +LI+MY KCG IEKAL++F + E +D SWT++
Sbjct: 271 GCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEKAPEARDLYSWTTM 330
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
ICGLAM+G+ AL++F M G PDD+T +GVL+AC+H GLVDEG R F ++ E Y
Sbjct: 331 ICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACAHCGLVDEGLRHFYSL-EKYA 389
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I PK+EHYGC+IDLLGR G L EA +IR + + N +I +GA L+AC+++ NV++GE
Sbjct: 390 ITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVI---WGAFLNACKVHSNVELGE 446
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
AA L +++ D +L+++YA W + R++M + ++K PGCSSIE++G +
Sbjct: 447 IAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREMNNLQIKKTPGCSSIELDGEV 506
Query: 574 HEFLVGDPSHSEMKEIYSMLD 594
HEF+ G H + EI ++L+
Sbjct: 507 HEFVAGGFQHPQHGEICTVLE 527
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 189/448 (42%), Gaps = 79/448 (17%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
+I +F+ GL L + + + G +A +F + P L++ + +A A
Sbjct: 32 EIHGLLFKEGLLHAGAHLPTAL-LSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAA 90
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFV---------FKAVGWLGEVKKGEKVHGYVVK 116
G ++L +F + GV PDN A G + G+ VH +V
Sbjct: 91 SGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAAGMAAARRPGKMVHAIIVT 150
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV---------------------- 154
+G+ D +V ++ +YG G++ ++LFD MP +
Sbjct: 151 SGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGDAYEL 210
Query: 155 ---------VSWNVSISGHVKCMRFEDAVDVFRRM--RQGCNLMPDEGTVVSTLSACTAL 203
VSWN I+G+ RF +A+++ R+M C + P+ T+ + L+AC
Sbjct: 211 FLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAACAGA 270
Query: 204 KNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
LE G +H ++++ + + +L+DMY KCG + +A ++F++ P
Sbjct: 271 GCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEKAP----------- 319
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
+ARDL+ WT MI G R +A+ +F MQ + PD
Sbjct: 320 ----------EARDLYS---------WTTMICGLAMHGRAADALKMFGMMQDNGIHPDDV 360
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
LV +L CA G +++G + + IT +I++ + G +++A I +
Sbjct: 361 TLVGVLNACAHCGLVDEGLRHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTM 420
Query: 383 REKDAASWTSIICGLAMNG-KINKALEL 409
R K A +I G +N K++ +EL
Sbjct: 421 RMKPNA----VIWGAFLNACKVHSNVEL 444
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 284/470 (60%), Gaps = 16/470 (3%)
Query: 140 CNVKKLFDEMPDKDVVSWN----VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
C L P+ + WN S V+ F A+ ++ RMR ++PD T
Sbjct: 10 CTHPSLHLSHPNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHA-VLPDLHTFPF 68
Query: 196 TLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L + + G+++H I L P + +L++MY CG + AR+ FDE+ +
Sbjct: 69 LLQS---INTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPD 125
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
+ W +++ G + AR LFD+ P ++++ W+ MI+GYV + A++LFR +Q
Sbjct: 126 LPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQT 185
Query: 315 I---RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
+ +L+P++F + ++L+ CA+LGAL+ GKW+H YI++ + +D V+ T+LI+MYAKCG
Sbjct: 186 LEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGS 245
Query: 372 IEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
IE+A IF L EKD +W+++I +M+G + LELF++M++ G +P+ +TF+ VL
Sbjct: 246 IERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLC 305
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
AC HGGLV EG +F M Y + P ++HYGC++DL RAG +++A +++ +P E +
Sbjct: 306 ACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDV 365
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+I +GALL+ RI+G+V+ E L +++ +SS + LL+N+YA RW +V ++R
Sbjct: 366 MI---WGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLR 422
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
M+ G++K+PGCS +E++G+I EF GD SH E+ +Y MLD + K L
Sbjct: 423 DLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRL 472
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 202/432 (46%), Gaps = 99/432 (22%)
Query: 30 CTHPS----HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK----GSFRKSLLLFSKLRE 81
CTHPS H N I+S +N LI+A + +F +L L+ ++R
Sbjct: 10 CTHPSLHLSHPN----------IES---FVWNNLIRASTRSRVQNPAFPPALSLYLRMRL 56
Query: 82 RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK--- 138
V PD T+PF+ +++ +G ++H ++ GL D +V S+++MY G
Sbjct: 57 HAVLPDLHTFPFLLQSIN---TPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTF 113
Query: 139 ----------------------------ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
I +KLFD+MP+K+V+SW+ I G+V C +
Sbjct: 114 ARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEY 173
Query: 171 EDAVDVFRRMR--QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMG 227
+ A+ +FR ++ +G L P+E T+ S LSAC L L+ GK +H YI++ ++ ++G
Sbjct: 174 KAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLG 233
Query: 228 NALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
+L+DMY KCG + A+ +FD + P K+V+ W++M++ + G E+ +LF R
Sbjct: 234 TSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFAR------ 287
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHG 345
M+N V +P+ VA+L C G + +G ++
Sbjct: 288 -----MVNDGV--------------------RPNAVTFVAVLCACVHGGLVSEGNEYFKR 322
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNG--- 401
+NE ++ ++++Y++ G IE A + + E D W +++ G ++G
Sbjct: 323 MMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVE 382
Query: 402 ----KINKALEL 409
I K LEL
Sbjct: 383 TCEIAITKLLEL 394
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 157/356 (44%), Gaps = 46/356 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ AQI +GL +P L+ + S G +A + F I P L ++N +I A A
Sbjct: 80 RQLHAQILLLGLANDPFVQTSLINM--YSSCGTPTFARQAFDEITQPDLPSWNAIIHANA 137
Query: 65 KKGSFRKSLLLFSKLRERGV----------------------------------SPDNFT 90
K G + LF ++ E+ V P+ FT
Sbjct: 138 KAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFT 197
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM- 149
V A LG ++ G+ VH Y+ KTG++ D + S++DMY G I K +FD +
Sbjct: 198 MSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLG 257
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P+KDV++W+ I+ E+ +++F RM + P+ T V+ L AC + G
Sbjct: 258 PEKDVMAWSAMITAFSMHGLSEECLELFARMVND-GVRPNAVTFVAVLCACVHGGLVSEG 316
Query: 210 KEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYV 266
E + + E +P++ + ++D+Y + G + +A + MP +V+ W ++++G
Sbjct: 317 NEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGAR 376
Query: 267 NCGQLEKAR----DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
G +E L + P + + N Y + R+ E L M++ +K
Sbjct: 377 IHGDVETCEIAITKLLELDPANSSA-YVLLSNVYAKLGRWREVRHLRDLMEVRGIK 431
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 308/545 (56%), Gaps = 13/545 (2%)
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+F ++ S KS+ L L R + D Y + + G + ++H +++
Sbjct: 37 SFGERESLHKSIQL---LESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSN 93
Query: 122 D--TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
++ N +++MYG G++ ++LF+ MP ++V +W V+++ +A+ FRR
Sbjct: 94 SQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRR 153
Query: 180 MRQGCNLMPDEGT--VVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCK 236
M Q PD T V+ A ++ G+EIHRY L ++G A++ MY K
Sbjct: 154 MYQSGE-RPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGK 212
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG L +AR F+E+ KN + W +M++ Y G+ +A +LF D V W AMI Y
Sbjct: 213 CGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAY 272
Query: 297 VQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Q R +A+ L+R M L P + V ++ CA+L AL+QG+ IH + +
Sbjct: 273 AQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDAN 332
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+V+ AL+ MY KCG +++AL++F+ ++ KD SW +II A +G ++AL L+ +M
Sbjct: 333 LLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDL 392
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G KP ++TF+G+LSACSHGGLV +G +F M + ++I+P + H+GC+IDLLGR G L
Sbjct: 393 QGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLA 452
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EAE +++ +P + N + + +LL AC+ +G++ G + A + S + LL+N
Sbjct: 453 EAELVLKSMPIQANAV---QWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSN 509
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYA+A RW+DV +R+ M GV+K PG S IEI ++HEF+ GD SH + +EIY L +
Sbjct: 510 IYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGK 569
Query: 596 MAKTL 600
M + +
Sbjct: 570 MVEEM 574
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 183/415 (44%), Gaps = 67/415 (16%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L YA ++F S+ S + + + + AF+ G ++L+ F ++ + G PD T+ +
Sbjct: 111 GRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVIL 170
Query: 96 --KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK---------- 143
A + +G ++H Y +GL + V +++ MYG G++ + +
Sbjct: 171 AAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKN 230
Query: 144 ---------------------KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+LF EM D D V WN I+ + + R + A+D++R M
Sbjct: 231 SVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHD 290
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLS 241
+L P +GT V+ + C L L+ G+ IH R + ++ NAL+ MY KCGCL
Sbjct: 291 TTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLD 350
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
EA ++F M K+ I W +++S Y G
Sbjct: 351 EALDVFHSMKLKDEISWNTIISSYAYHGH------------------------------- 379
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVAT 360
D+A+ L++EM + +KP + V LL+ C+ G + G + + +++RI
Sbjct: 380 SDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFG 439
Query: 361 ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMI 414
+I++ + G + +A + + + +A W S++ +G + + + Q++
Sbjct: 440 CIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVV 494
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 311/556 (55%), Gaps = 19/556 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + ++++N L+ +A+ G ++ +F + E+ ++ ++ + A
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVH 185
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G +++ + ++ ++D N +M + K+ + + LFD+MP +D +SWN
Sbjct: 186 NGRIEEA----CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
ISG+ + A +F + P T ++N L E + ++
Sbjct: 242 ISGYAQGGGLSQARRLF-------DESPTRDVFTWTAMVSGYVQNGML-DEAKTFFDEMP 293
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
E + NA++ Y + + ARELF+ MP +N+ W +M++GY G + +AR FD
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P RD V W A+I GY Q ++EA+ +F E++ ++ L+ CA + ALE G
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K IHG + V AL+ MY KCG I++A + F + EKD SW +++ G A +
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G +AL +F M + G KPD+IT +GVLSACSH GL+D G +F +MT+ Y + P +H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C+IDLLGRAG L+EA++LIR +P + +GALL A RI+GN ++GEK A ++
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPG---AASWGALLGASRIHGNTELGEKAAEMVF 590
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
K+E ++S + LL+N+YA++ RW D +R KM+++GV+KVPG S +E+ IH F VGD
Sbjct: 591 KMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGD 650
Query: 581 PSHSEMKEIYSMLDRM 596
SH E + IY+ L+ +
Sbjct: 651 CSHPEKERIYAYLEEL 666
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 199/426 (46%), Gaps = 55/426 (12%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
++P+ L TH +G+ A +F ++ ++YN +I + + F + LF
Sbjct: 45 KDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFD 104
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
++ ER D F++ V+ TG YV N
Sbjct: 105 QMPER----DLFSWN---------------------VMLTG-----YVRNC--------- 125
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
++ + ++LFD MP+KDVVSWN +SG+ + ++A +VF + MP++ ++
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF-------DNMPEKNSISWNG 178
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
+ N + +E + ++ I N L+ + + L +AR LFD+MP ++ I
Sbjct: 179 LLAAYVHNGRI-EEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS 237
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W +M+SGY G L +AR LFD SP RD+ WTAM++GYVQ DEA F EM
Sbjct: 238 WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP---- 293
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+ ++ A++ G Q ++ I + E+ + +I Y + G I +A +
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMD----IARELFESMPCRNISSWNTMITGYGQIGDIAQARK 349
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
F + ++D SW +II G A +G +AL +F ++ G + TF LS C+
Sbjct: 350 FFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAA 409
Query: 438 VDEGRR 443
++ G++
Sbjct: 410 LELGKQ 415
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 179/371 (48%), Gaps = 25/371 (6%)
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+F+ MP + VS+N ISG+++ +F A ++F + MP+ + ++
Sbjct: 71 VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF-------DQMPERDLFSWNVMLTGYVR 123
Query: 205 NLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
N LG + R + E + N+LL Y + G + EARE+FD MP KN I W +++
Sbjct: 124 NCRLG-DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAA 182
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
YV+ G++E+A LF+ D++ W ++ G+V+ + +A LF +M + D
Sbjct: 183 YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPV----RDAISW 238
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+++G AQ G L Q + + + T D TA++ Y + G++++A F E+ E
Sbjct: 239 NTMISGYAQGGGLSQAR----RLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
K+ S+ ++I G K++ A ELF M ++ +++ G + + R+F
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS----SWNTMITGYGQIGDIAQARKF 350
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
F+ M Q + +I ++G +EA + +I + + +G LS C
Sbjct: 351 FDMMP-----QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 505 IYGNVDMGEKL 515
+++G+++
Sbjct: 406 DIAALELGKQI 416
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 152/320 (47%), Gaps = 9/320 (2%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
T+ I ++F+ +N + N ++ + G++ A K F + +++ +I
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMIT--GYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A+ G + ++L +F ++++ G S + T+ + ++ G+++HG VK G
Sbjct: 368 GYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT 427
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+V N+++ MY G I F+ + +KDVVSWN ++G+ + A+ VF M+
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMK 487
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGC 239
+ PDE T+V LSAC+ L+ G E + ++ P + ++D+ + G
Sbjct: 488 T-AGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546
Query: 240 LSEARELFDEMP-NKNVICWTSMVSG---YVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
L EA++L MP W +++ + N EKA ++ + ++ ++ + N
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL 606
Query: 296 YVQFNRFDEAVALFREMQII 315
Y R+ +A + +M+ I
Sbjct: 607 YAASGRWVDADKMRSKMRDI 626
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 196/548 (35%), Positives = 306/548 (55%), Gaps = 69/548 (12%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
DT++ N ++ +Y G + + + LFD+M +DV SWN +S + K ED VF +M
Sbjct: 57 DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMS 116
Query: 182 ----------------QGCN--------LMPDEG------TVVSTLSACTALKNLELGKE 211
GC+ M +EG T VS L AC+ L +++ GK+
Sbjct: 117 VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQ 176
Query: 212 IH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH R + L + + NAL +MY KCG L +AR LFD M NKNV+ W SM+SGY+ GQ
Sbjct: 177 IHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQ 236
Query: 271 LEKARDLF----------DRSPV-------------------------RDIVLWTAMING 295
E LF D+ + +D V WT M+ G
Sbjct: 237 PETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVG 296
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Q + ++A+ LFREM + ++PD F + ++++ CA+L +L QG+ +HG + D
Sbjct: 297 CAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHD 356
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+V++AL++MY+KCG A +F + ++ SW S+I G A NGK +AL L+ +M+
Sbjct: 357 LLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLH 416
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
KPD+ITF+GVLSAC H GLV+ G+ +F ++++++ + P +HY C+I+LLGRAG +D
Sbjct: 417 ENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMD 476
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
+A +LI+ + E N +I + LLS CRI +V+ GE A L +++ ++ + +L+N
Sbjct: 477 KAVDLIKSMTFEPNCLI---WSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSN 533
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
IYA+ RW+DV VR MK ++K S IEI+ +H+F+ D +HSE ++IY L+R
Sbjct: 534 IYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNR 593
Query: 596 MAKTLLDS 603
+ K L +S
Sbjct: 594 LIKKLQES 601
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 161/336 (47%), Gaps = 11/336 (3%)
Query: 179 RMRQGCNLMPDEGTVVST-----LSACTALKNLELGKEIHRYINQELEFTP---IMGNAL 230
R+R+ + + GT S L C ++ K + +++ L + P + N L
Sbjct: 6 RLREAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHL-YQPTDTFLQNRL 64
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
L +Y K G LS+AR+LFD+M ++V W +M+S Y G +E R +FD+ V D V +
Sbjct: 65 LHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYN 124
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
+I G+ +A+ F MQ + + V++L C+QL +++GK IHG I
Sbjct: 125 TVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVAT 184
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ V AL MYAKCG +++A +F + K+ SW S+I G NG+ +LF
Sbjct: 185 SLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLF 244
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M S G PD +T +LSA G +DE + F + E ++ GC +
Sbjct: 245 CEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEE 304
Query: 471 AGLLDEAEELIRKIPNENNEI--IVPLYGALLSACR 504
LL E L+ + +N I +V L S C+
Sbjct: 305 DALLLFREMLLENVRPDNFTISSVVSSCARLASLCQ 340
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 196/623 (31%), Positives = 333/623 (53%), Gaps = 27/623 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQ+ A +G + + + KL+ F + S + + I +P L +NLLI
Sbjct: 57 LPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNP--LPWNLLI 114
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV-VKTGL 119
++ G ++L + ++ +GV PDNFTYP V KA G ++ G +VH + G
Sbjct: 115 SSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGH 174
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
++ YV NS++ MYG G++ ++LF++MP++D VSWN IS + +++A ++F
Sbjct: 175 RWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEE 234
Query: 180 MRQGCNLMPDEGTVVS---TLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYC 235
MR L E +++ C +N + E+ + + +++ P+ L
Sbjct: 235 MR----LAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACS 290
Query: 236 KCGCL--------SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
G + S R FD N ++++ Y C L A LF + +
Sbjct: 291 HIGAIKLGTVIHASAIRSCFDGFDNVR----NALITMYSRCKDLRHADILFKSIKTKSLT 346
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W +M++GY +R +EA LFREM ++P+ + ++L CA++ L+QGK H YI
Sbjct: 347 TWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYI 406
Query: 348 NENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
D ++ +L+EMYA+ G + A +F LR +D ++TS+I G + G+ A
Sbjct: 407 MRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTA 466
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L+LF +MI KPD +T + VLSACSH GLV EG F M+ +Y I P +EH+ C++D
Sbjct: 467 LKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVD 526
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
L GRAGLL++A+++I +P ++ L+ ACRI+GN ++GE A L +++ ++
Sbjct: 527 LFGRAGLLNKAKKVITSMPYRPT---TAMWATLVGACRIHGNTEIGEWAAEKLLEMKPEN 583
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
++ L+AN++A+A RW + VR M+++GVRK PGC+ +++ F+VGD S
Sbjct: 584 PGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWVDVGSGFSPFVVGDTSKHNS 643
Query: 587 KEIYSMLDRMAKTLLDSKQNAME 609
++Y +L+ + + D+ A E
Sbjct: 644 NDLYELLEGLTDLMKDAGYVAGE 666
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 195/425 (45%), Gaps = 15/425 (3%)
Query: 60 IKAFAKKGSFRKSLLLFS--KLRERGVSPDNFTYPF--VFKAVGWLGEVKKGEKVHGYVV 115
+K A+KG K+ FS KL + D + + + L + +G+++H + +
Sbjct: 9 LKDLARKGHLLKAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTI 68
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
G E + ++ Y + + + + + WN+ IS +V +A+
Sbjct: 69 SLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALS 128
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL--EFTPIMGNALLDM 233
+R M + PD T S L AC +L+ G+E+H IN + + N+L+ M
Sbjct: 129 AYREMVHK-GVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSM 187
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR----DIVLW 289
Y K G L AR LF++MP ++ + W ++S Y + G ++A +LF+ + +I+ W
Sbjct: 188 YGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITW 247
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
+ G VQ F A+ L +M+ + D ++ L C+ +GA++ G IH +
Sbjct: 248 NTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHA--SA 305
Query: 350 NRITVDAV--VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
R D V ALI MY++C + A +F ++ K +W S++ G + +A
Sbjct: 306 IRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEAS 365
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LF +M+ G +P+ +T +L C+ + +G+ F + + L + L+++
Sbjct: 366 FLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEM 425
Query: 468 LGRAG 472
R+G
Sbjct: 426 YARSG 430
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%)
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ +LL C L +L QGK +H + V+ L+ Y+ L+ A I
Sbjct: 44 ISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSD 103
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ W +I NG +AL + +M+ G +PD+ T+ VL AC +D GR
Sbjct: 104 IVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGRE 163
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
++ Y + L + L+ + G+ G LD A L ++P +
Sbjct: 164 VHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERD 208
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 208/637 (32%), Positives = 334/637 (52%), Gaps = 83/637 (13%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC---LLAYNLLIKA 62
+ A +F G + N N L+ + G A ++F ++ L+++N ++ A
Sbjct: 166 SVHAVVFASGFEWNVFVGNGLV--SMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAA 223
Query: 63 FAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + G +++ +F ++ E G+ PD + V A +G +G++VHGY +++GL
Sbjct: 224 YMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFE 283
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D +V N+++DMY G + K+F+ M KDVVSWN ++G+ + RF+DA+ +F ++R
Sbjct: 284 DVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIR 343
Query: 182 QG----------------------------------CNLMPDEGTVVSTLSACTALKNLE 207
+ C P+ T+VS LS C + L
Sbjct: 344 EEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLL 403
Query: 208 LGKEIH----RYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMP--NKNVIC 257
GKE H ++I E P ++ NAL+DMY KC AR +FD +P +++V+
Sbjct: 404 HGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVT 463
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
WT ++ G G+ +A +LF + +Q + F +
Sbjct: 464 WTVLIGGNAQHGEANEALELFSQ---------------MLQPDNF--------------V 494
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRI-TVDAVVATALIEMYAKCGLIEKAL 376
P+ F + L CA+LGAL G+ IH Y+ NR + VA LI+MY+K G ++ A
Sbjct: 495 MPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAAR 554
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F + +++ SWTS++ G M+G+ +AL++F +M PD +TF+ VL ACSH G
Sbjct: 555 VVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSG 614
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
+VD+G +FN M + + + P EHY C++DLL RAG LDEA ELIR +P + + +
Sbjct: 615 MVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAV---W 671
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
ALLSACR+Y NV++GE A L ++ES + +TLL+NIYA+A W+DV +R MK
Sbjct: 672 VALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNT 731
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
G++K PGCS ++ F GD SH ++IY +L
Sbjct: 732 GIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLL 768
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 266/505 (52%), Gaps = 36/505 (7%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
Q+ GL +P + + + P+ L ++ S S + +N LI+ G
Sbjct: 70 QLLVQGLPHDPTHIISMYLTFNSPAKA-LSVLRRLHPS--SHTVFWWNQLIRRSVHLGFL 126
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
L L+ +++ G PD++T+PFV KA G + + G VH V +G E++ +V N +
Sbjct: 127 EDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGL 186
Query: 130 MDMYGVLGKICNVKKLFDEMPDK---DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
+ MYG G N +++FDEM ++ D+VSWN ++ +++ A+ +F RM + +
Sbjct: 187 VSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGI 246
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARE 245
PD ++V+ L AC ++ GK++H Y + F + +GNA++DMY KCG + EA +
Sbjct: 247 RPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANK 306
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD------IVLWTAMINGYVQF 299
+F+ M K+V+ W +MV+GY G+ + A LF++ +R+ +V W+A+I GY Q
Sbjct: 307 VFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEK--IREEKIELNVVTWSAVIAGYAQR 364
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY-------INENRI 352
EA+ +FR+M + +P+ LV+LL+GCA G L GK H + ++EN
Sbjct: 365 GLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDP 424
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA--SWTSIICGLAMNGKINKALELF 410
D +V ALI+MY+KC + A +F + KD + +WT +I G A +G+ N+ALELF
Sbjct: 425 GDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELF 484
Query: 411 SQMISGG--AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH-----YGC 463
SQM+ P+ T L AC+ G + GR+ Y ++ + E C
Sbjct: 485 SQMLQPDNFVMPNAFTISCALMACARLGALRFGRQI-----HAYVLRNRFESAMLFVANC 539
Query: 464 LIDLLGRAGLLDEAEELIRKIPNEN 488
LID+ ++G +D A + + N
Sbjct: 540 LIDMYSKSGDVDAARVVFDNMHQRN 564
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 304/580 (52%), Gaps = 40/580 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +F + + ++N ++ FA+ G + L +R G+ PD T +
Sbjct: 102 GRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLI 161
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD--KD 153
++ + + V+ + ++ G+ D V N+++ Y G +C+ + LFDE+ +
Sbjct: 162 DSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRS 221
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
VVSWN I+ + + AV+ ++ M G PD T+++ LS+C K L G +H
Sbjct: 222 VVSWNSMIAAYANFEKHVKAVNCYKGMLDG-GFSPDISTILNLLSSCMQPKALFHGLLVH 280
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
+ K GC + +V +++ Y CG +
Sbjct: 281 SH------------------GVKLGC------------DSDVCVVNTLICMYSKCGDVHS 310
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
AR LF+ + V WT MI+ Y + EA+ LF M+ KPD ++AL++GC Q
Sbjct: 311 ARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQ 370
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
GALE GKWI Y N + + VV ALI+MYAKCG A E+FY + + SWT++
Sbjct: 371 TGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTM 430
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I A+NG + ALELF M+ G KP+ ITF+ VL AC+HGGLV+ G FN MT+ Y
Sbjct: 431 ITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYG 490
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I P ++HY C++DLLGR G L EA E+I+ +P E + I + ALLSAC+++G ++MG+
Sbjct: 491 INPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGI---WSALLSACKLHGKMEMGK 547
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
++ L ++E + + + +ANIYASA WE V +R+ MK + VRK PG S I++NG
Sbjct: 548 YVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKP 607
Query: 574 HEFLVGDPSHSEMKEIYSMLD----RMAKTLLDSKQNAME 609
F V D H E IY MLD R K LL + E
Sbjct: 608 TIFTVEDRDHPETLYIYDMLDGLTSRSKKGLLAYSEEIFE 647
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 237/505 (46%), Gaps = 55/505 (10%)
Query: 50 SPC------LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+PC L +N + +G + +L+LF ++++ G++P+N T+PFV KA L
Sbjct: 9 TPCINRFSTLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSH 68
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
++ + +H +V+K+ + + +V + +DMY G++ + +F EMP +D+ SWN + G
Sbjct: 69 LRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLG 128
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL-ELGKEIHRYINQELEF 222
+ + + R MR + PD TV+ + + +K+L LG I +
Sbjct: 129 FAQSGFLDRLSCLLRHMRLS-GIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHM 187
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPN--KNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ N L+ Y KCG L A LFDE+ + ++V+ W SM++ Y N
Sbjct: 188 DVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYAN------------- 234
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
F + +AV ++ M PD ++ LL+ C Q AL G
Sbjct: 235 ------------------FEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHG 276
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+H + + D V LI MY+KCG + A +F + +K SWT +I A
Sbjct: 277 LLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEK 336
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G +++A+ LF+ M + G KPD +T + ++S C G ++ G+ N Y I L+
Sbjct: 337 GYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDN-----YSINNGLKD 391
Query: 461 Y----GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA 516
LID+ + G ++A+EL + N V + +++AC + G+V +L
Sbjct: 392 NVVVCNALIDMYAKCGGFNDAKELFYTMANRT----VVSWTTMITACALNGDVKDALELF 447
Query: 517 ALLEKIESKDSSFHTLLANIYASAN 541
++ ++ K + T LA + A A+
Sbjct: 448 FMMLEMGMKPNHI-TFLAVLQACAH 471
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 11/319 (3%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ + ++G + +N L+ C + G++ A +F + +++ ++I A+A+K
Sbjct: 279 VHSHGVKLGCDSDVCVVNTLI--CMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEK 336
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G +++ LF+ + G PD T + G G ++ G+ + Y + GL+ + VC
Sbjct: 337 GYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVC 396
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++DMY G + K+LF M ++ VVSW I+ +DA+++F M + +
Sbjct: 397 NALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLE-MGM 455
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEAR 244
P+ T ++ L AC +E G E + Q+ P + + ++D+ + G L EA
Sbjct: 456 KPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREAL 515
Query: 245 ELFDEMP-NKNVICWTSMVSGYVNCGQLEKAR----DLFDRSPVRDIVLWTAMINGYVQF 299
E+ MP + W++++S G++E + LF+ P + V + M N Y
Sbjct: 516 EIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEP-QVAVPYVEMANIYASA 574
Query: 300 NRFDEAVALFREMQIIRLK 318
++ A+ R M+ ++++
Sbjct: 575 EMWEGVAAIRRNMKYLQVR 593
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 321/598 (53%), Gaps = 47/598 (7%)
Query: 5 KQIQAQIFQIGLQQNP---ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+ + AQ+ G+ L + C P+ A ++F + +A+N L+
Sbjct: 79 RAVHAQLAARGIDSEALAATALANMYAKCRRPAD-----ARRVFDRMPVRDRVAWNALVA 133
Query: 62 AFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ G R ++ + +++ E G PD+ T V A + + H + +++GLE
Sbjct: 134 GYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLE 193
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
V +I+D Y G I + +FD MP K+ VSWN I G+ + +A+ +F RM
Sbjct: 194 ELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRM 253
Query: 181 -RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
+G ++ + +V++ L AC L L+ G +H + + L+ + NAL+ MY KC
Sbjct: 254 VEEGVDVT--DVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK 311
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A +FDE+ + + W +M+ G C Q NG +
Sbjct: 312 RVDLASHVFDELDRRTQVSWNAMILG---CAQ-----------------------NGCSE 345
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+AV LF MQ+ +KPD F LV+++ A + Q +WIHGY + D V
Sbjct: 346 -----DAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYV 400
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
TALI+MYAKCG + A +F RE+ +W ++I G +G A+ELF +M S G
Sbjct: 401 LTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGI 460
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P++ TF+ VLSACSH GLVDEGR +F +M E Y ++P +EHYG ++DLLGRAG LDEA
Sbjct: 461 VPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAW 520
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
I+K+P + + +YGA+L AC+++ NV++ E+ A + ++ ++ +H LLANIYA
Sbjct: 521 AFIQKMPMDPG---LSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYA 577
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+A+ W+DV VR M++ G++K PG S I++ IH F G +H + KEIYS L ++
Sbjct: 578 NASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 5/229 (2%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNV----ICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+LL + G L+ R + ++ + + + T++ + Y C + AR +FDR PV
Sbjct: 63 TSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPV 122
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKW 342
RD V W A++ GY + A+ + MQ +PD LV++L CA AL +
Sbjct: 123 RDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACRE 182
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
H + + + VATA+++ Y KCG I A +F + K++ SW ++I G A NG
Sbjct: 183 AHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGD 242
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+AL LF++M+ G D++ + L AC G +DEG R + +
Sbjct: 243 SREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI 291
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 324/607 (53%), Gaps = 45/607 (7%)
Query: 42 EKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL 101
E + S P ++ ++ +I F+ +S+ LF+++ GV+PD T V A +
Sbjct: 224 ENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRM 283
Query: 102 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY---------------------------- 133
+ G+++HGY+V+ L + +V N+++ MY
Sbjct: 284 KWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMI 343
Query: 134 -GVL--GKICNVKKLFDEMP----DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
G L G + K+LF +M ++D +SWN ISGHV F+DA+ +FR + +
Sbjct: 344 VGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLME-GI 402
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARE 245
PD T+ S L+ + + GKEIH I + L+ +G AL++MYCKC + A+
Sbjct: 403 EPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQM 462
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR----DIVLWTAMINGYVQFNR 301
FDE+ ++ W +++SGY C Q+ K R+L +R ++ W +++ G V+ +
Sbjct: 463 AFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQ 522
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+D A+ LF EMQ+ L+PD + + +L C++L + +GK +H Y DA +
Sbjct: 523 YDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGAT 582
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MYAKCG I+ +++ ++ + +++ AM+G + + +F +M+ +PD
Sbjct: 583 LVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPD 642
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+TF+ VLS+C H G + G F M E Y I P L+HY C++DLL RAG LDEA +LI
Sbjct: 643 HVTFLSVLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLI 701
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
+ +P E + + + ALL C I+ V +GE A L ++E ++ + LLAN+YASA
Sbjct: 702 KNMPMEADSVT---WSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAG 758
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
RW D+ R+ M + G++K PGCS IE +H FL D SH ++EIY MLD + K +
Sbjct: 759 RWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIR 818
Query: 602 DSKQNAM 608
+ +M
Sbjct: 819 IKEHKSM 825
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/506 (29%), Positives = 241/506 (47%), Gaps = 44/506 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+T KQ+ + + G + KL+ + + + A +F + L ++ ++
Sbjct: 47 LTLGKQLHSHSIKTGFYNHNFVQTKLLQM--YSINSSFEDAWHMFDKMTLKNLHSWTAVL 104
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSP--DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ G F K +LF + G+ D F +P V LG+++ G +VHG V+K G
Sbjct: 105 RLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHG 164
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
+ YV N+++DMYG G + KK+ + M KD VSWN I+ V +A+D+
Sbjct: 165 FVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLE 224
Query: 179 RM----------------------------------RQGCNLMPDEGTVVSTLSACTALK 204
M G + PD T+ S L AC+ +K
Sbjct: 225 NMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMK 284
Query: 205 NLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
L +GKE+H YI EL + NAL+ MY +CG + A ++F + K + +M+
Sbjct: 285 WLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIV 344
Query: 264 GYVNCGQLEKARDLF----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
GY+ G + KA++LF RD + W MI+G+V FD+A+ LFR++ + ++P
Sbjct: 345 GYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEP 404
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D F L ++LTG A + + QGK IH + ++ V AL+EMY KC I A F
Sbjct: 405 DSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAF 464
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
E+ E+D ++W ++I G A +I K EL +M S G +P+ T+ +L+ D
Sbjct: 465 DEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYD 524
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLI 465
+ FN M +V ++P + G ++
Sbjct: 525 LAMQLFNEM-QVSSLRPDIYTVGIIL 549
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 222/458 (48%), Gaps = 12/458 (2%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G+++H + +KTG +V ++ MY + + +FD+M K++ SW + H+
Sbjct: 50 GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLN 109
Query: 167 CMRFEDAVDVFRR-MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI 225
F +F + G D L+ C L +LELG+++H + + T +
Sbjct: 110 MGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNV 169
Query: 226 -MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+GNAL+DMY KCG L EA+++ + M K+ + W S+++ V G + +A DL + +
Sbjct: 170 YVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLS 229
Query: 285 D----IVLWTAMINGYVQFNRFD-EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
+ +V W+A+I G+ N +D E+V LF M + PD L ++L C+++ L
Sbjct: 230 ELEPNVVTWSAVIGGFSS-NAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFV 288
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK +HGYI + + + VA AL+ MY +CG ++ A +IF + K AAS+ ++I G
Sbjct: 289 GKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLE 348
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
NG + KA ELF QM G + D I++ ++S + D+ F + + I+P
Sbjct: 349 NGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLL-MEGIEPDSF 407
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
G ++ + + +E I I G L N + ++A
Sbjct: 408 TLGSILTGFADMTCIRQGKE-IHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMA--F 464
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
++I +D+S L + YA N+ + + ++MK G
Sbjct: 465 DEISERDTSTWNALISGYARCNQIGKIRELVERMKSDG 502
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 180/401 (44%), Gaps = 71/401 (17%)
Query: 36 GNLLYAEKIFGSIQSPCL----LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
GN+ A+++F ++ + +++N +I F +L+LF L G+ PD+FT
Sbjct: 350 GNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTL 409
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ + +++G+++H + GL+ +++V ++++MY I + FDE+ +
Sbjct: 410 GSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISE 469
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMR------------------------------ 181
+D +WN ISG+ +C + ++ RM+
Sbjct: 470 RDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQL 529
Query: 182 ----QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
Q +L PD TV L+AC+ L + GK++H Y I + +G L+DMY K
Sbjct: 530 FNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAK 589
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG + ++++++ N N++C +M++ Y G E
Sbjct: 590 CGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGE------------------------ 625
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
E + +FR M R++PD +++L+ C G+++ G + IT
Sbjct: 626 -------EGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTL 678
Query: 357 VVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICG 396
T ++++ ++ G +++A ++ + E D+ +W++++ G
Sbjct: 679 KHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGG 719
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
+L GK +H + + V T L++MY+ E A +F ++ K+ SWT+++
Sbjct: 46 SLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVL- 104
Query: 396 GLAMN-GKINKALELFSQMISG--GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
L +N G K LF + + G K D F VL+ C G ++ GR+ + M +
Sbjct: 105 RLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQ-VHGMVLKH 163
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC----RIYGN 508
+ LID+ G+ G LDEA++++ + ++ + ++++AC +Y
Sbjct: 164 GFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKD----CVSWNSIITACVANGVVYEA 219
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+D+ E + LL ++E ++ ++ ++A DV +V + +G P ++
Sbjct: 220 LDLLENM--LLSELEPNVVTWSAVIGGFSSNA---YDVESVELFARMVGAGVAPDARTL 273
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 184/513 (35%), Positives = 310/513 (60%), Gaps = 16/513 (3%)
Query: 108 EKVHGYVVKTGL---EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
++H ++KT L +F + + GV G + +F + + + I G
Sbjct: 23 RQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGF 82
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPD-EGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
+++ ++ RM N E ++ S L AC L + G+++H + + L F
Sbjct: 83 SDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWF 142
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
P +GN+++ MY G + AR +FD MPN++V+ W SM++GY+ G++E A+ +F+
Sbjct: 143 DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMS 202
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+D+V WT+MI+ YVQ +A+ LFREM + L+PD +V++L+ A LG +E+GKW
Sbjct: 203 DKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKW 262
Query: 343 IHGYINENRITVDA-VVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMN 400
+H Y++ N+I + + + +ALI+MY+KCG IE A +F + ++ W S+I GLA++
Sbjct: 263 LHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIH 322
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G +AL++F +M +P++ITF+G+LS CSHGGLV+EG+ +F +M E Y+I P+++H
Sbjct: 323 GLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQH 382
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC+IDL GRAG L++A +I+ +P E + + + A+LSA +G++++G+ A
Sbjct: 383 YGCMIDLFGRAGRLEDALGVIQNMPFEADLLA---WKAILSASMKHGHIEIGKSAALRAI 439
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++ DSS + LL+NIYA A RW+DV +R M++ GV+K+ GCSS+ +NG +HEFL+G
Sbjct: 440 ELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLG- 498
Query: 581 PSHSEMKEIYS--MLDRMAKTLLDSKQNAMEGD 611
E+ YS +L ++A+ + K E D
Sbjct: 499 ---KELDSSYSGQVLAKIAEVVSRLKLQGYEPD 528
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 229/476 (48%), Gaps = 87/476 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPS-HGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L+QI AQ+ + L + T+++L+ FC+ G L YA +F IQ P + L
Sbjct: 19 LCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFAL 78
Query: 60 IKAFAKKGSFRKSLLLFSKLRE--RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
IK F+ + +SL+L++++ S F+ P V KA G L +G +VHG V+KT
Sbjct: 79 IKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKT 138
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE------ 171
L FD +V NS++ MY G+I +++FD MP++DVVSWN I+G++K E
Sbjct: 139 HLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVF 198
Query: 172 -------------------------DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
A+D+FR M L PD +VS LSA L +
Sbjct: 199 ETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLS-LGLRPDGPAIVSVLSAIADLGFV 257
Query: 207 ELGKEIHRYIN-QELEFTP-IMGNALLDMYCKCGCLSEARELFDEMPN-KNVICWTSMVS 263
E GK +H Y++ ++E + +G+AL+DMY KCG + A +F + + +N+ W SM+S
Sbjct: 258 EEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMIS 317
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G I+G + EA+ +F EM+ + ++P++
Sbjct: 318 GLA--------------------------IHGLAR-----EALDIFVEMERMDIEPNEIT 346
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYEL 382
+ LL+ C+ G +E+G++ ++E V + +I+++ + G +E AL + +
Sbjct: 347 FLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNM 406
Query: 383 R-EKDAASWTSIICGLAMNGKIN-------KALELFSQMISGGAKPDDITFIGVLS 430
E D +W +I+ +G I +A+EL PDD + +LS
Sbjct: 407 PFEADLLAWKAILSASMKHGHIEIGKSAALRAIEL---------APDDSSSYVLLS 453
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 212/610 (34%), Positives = 329/610 (53%), Gaps = 52/610 (8%)
Query: 34 SHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPD-----N 88
SH NL A +F S L+ YN ++ +A+ ++ L F E +PD
Sbjct: 490 SH-NLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGF--FMEMQTAPDMIRIDE 546
Query: 89 FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY---GVLGKICNV--- 142
FT + L + G+++H +++KT + + +S++DMY G + C V
Sbjct: 547 FTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYG 606
Query: 143 ---------------------------KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
+ E+ DVV+WN ISG V+ E+++
Sbjct: 607 CGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLK 666
Query: 176 VFRRM---RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALL 231
+F RM + G N E T S LSAC+ L++L+LGKE+H Y+ L P + + L+
Sbjct: 667 LFVRMADEKVGWN----EHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLV 722
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
D+YCKC + A+ + E+ +NV TSM+ GY + G + +AR LFD ++ +WTA
Sbjct: 723 DVYCKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTA 782
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+ GYV+ + + L E + PD IL++++ CA AL GK IH Y+
Sbjct: 783 LFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAG 842
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
I +D + ++L++MY+KCG I A IF E+ +KD+ + +I G A +G N+A++LF
Sbjct: 843 IKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFK 902
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+M+ G KPD ITF+ +LSAC HGGLV+ G FF++M+ Y I P+++HY C+IDL GRA
Sbjct: 903 EMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRA 962
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
LD+A E +RKIP + + +I +GA L+ACRI GN ++ K L IE ++ S +
Sbjct: 963 NQLDKALEFMRKIPIQLDAVI---WGAFLNACRINGNAELARKAEDELLVIEGENGSRYV 1019
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LAN+YA+ WE++ +R+KMK V+K GCS + + H F+ GD HS+ + IYS
Sbjct: 1020 QLANVYAAEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYS 1079
Query: 592 MLDRMAKTLL 601
L + LL
Sbjct: 1080 TLASLTDELL 1089
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 225/514 (43%), Gaps = 101/514 (19%)
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ +K G H +K+G ++ N ++ Y G + + +KLFDEMP+++V SWN
Sbjct: 424 MKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAI 483
Query: 161 ISGHVKCMR-------FEDAV-------------------------DVFRRMRQGCNLMP 188
I+ +VK F+ AV F M+ +++
Sbjct: 484 IAAYVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIR 543
Query: 189 -DEGTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLDMYCKCGCLSEA-RE 245
DE T+++ L+ L + GK++H ++ + + T ++L+DMY KCG EA R
Sbjct: 544 IDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRV 603
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS-PVRDIVLWTAMINGYVQFNRFDE 304
+ + + +MV+ G+++ A DLF + D+V W MI+G+VQ +E
Sbjct: 604 YYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEE 663
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
++ LF M ++ ++ ++L+ C+ L +L+ GK +H Y+ +NR+ + + + L++
Sbjct: 664 SLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVD 723
Query: 365 MYAKC-------------------------------GLIEKALEIFYELREKDAASWTSI 393
+Y KC G + +A ++F L EK++A WT++
Sbjct: 724 VYCKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTAL 783
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-Y 452
G + EL S+ PD + I ++ AC+ + G++ + M
Sbjct: 784 FFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGI 843
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN---EIIVPLYG------------ 497
++ KL L+D+ + G + AE + R++ ++++ I++ Y
Sbjct: 844 KLDTKLT--SSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLF 901
Query: 498 ----------------ALLSACRIYGNVDMGEKL 515
ALLSACR G V++GE
Sbjct: 902 KEMVKHGFKPDAITFVALLSACRHGGLVELGEHF 935
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 14/304 (4%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
QN ++ ++V + S GN+ A K+F S+ + L + K L S
Sbjct: 744 QNVYSITSMIV--GYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVFELLS 801
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
+ R+ PD + A + G+++H Y+++ G++ DT + +S++DMY G
Sbjct: 802 EYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCG 861
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
I +++F E+ DKD + +N+ I+G+ +AV +F+ M + PD T V+ L
Sbjct: 862 SIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKH-GFKPDAITFVALL 920
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-N 254
SAC +ELG+ ++ + P + + ++D+Y + L +A E ++P + +
Sbjct: 921 SACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLD 980
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING--YVQFNRFDEAVALFREM 312
+ W + ++ G E AR D +L NG YVQ A + EM
Sbjct: 981 AVIWGAFLNACRINGNAELARK------AEDELLVIEGENGSRYVQLANVYAAEGNWEEM 1034
Query: 313 QIIR 316
IR
Sbjct: 1035 GRIR 1038
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 316/587 (53%), Gaps = 38/587 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ + + GL P N L+ + L A K+F + L+ +N +I +
Sbjct: 131 RQLHGLVVRSGLDFVPLVGNTLVT--VYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYV 188
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + +LF+++ G+ PD+ T+ ++ +K+ +++HGY+V+ G+ D Y
Sbjct: 189 QNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVY 248
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++++D+Y K+F+ D+V + ISG+V +DA+++FR + Q
Sbjct: 249 LNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQK- 307
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
++P+ T S L AC L ++LG+E+H YI ELE +G+A+++MY KC
Sbjct: 308 KMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKC------ 361
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
G+L+ A +F R ++D + W ++I + Q + +
Sbjct: 362 -------------------------GRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPE 396
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ LFR+M + +K D + A L+ CA + AL GK IHG++ + D +ALI
Sbjct: 397 EAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALI 456
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKCG + A +F ++EK+ +W SII +G + +L LF M+ G +PD I
Sbjct: 457 NMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHI 516
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF+ +LS+C H G V++G R+F MTE Y I ++EHY C+ DL GRAG LDEA E+I
Sbjct: 517 TFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITS 576
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P ++G LL ACR++GNV++ E + L +E K+S ++ LL ++ A A +W
Sbjct: 577 MPFPPA---ASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKW 633
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
V ++ MKE GV+KVPGCS IE+N F D SH E +IY
Sbjct: 634 RSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIY 680
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/551 (27%), Positives = 259/551 (47%), Gaps = 83/551 (15%)
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV 142
GV PD +T+P V K L V+ G+ + +++ G + D +V +S++ +Y G I +
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
++ FD+M DKD V WNV I+G+V+C + A+ +F+ M PD T LS +
Sbjct: 65 RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSS-EAKPDSVTFACVLSISCS 123
Query: 203 LKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKC------------------------ 237
+E G+++H + + L+F P++GN L+ +Y K
Sbjct: 124 EAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRM 183
Query: 238 -------GCLSEARELFDEMPNKNV----ICWTSMVSG---------------------- 264
G + +A LF+EM + + I +TS +
Sbjct: 184 IGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGV 243
Query: 265 ----YVNCGQLE---KARD------LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
Y+N ++ K RD +F+ S DIV++TAMI+GYV +A+ +FR
Sbjct: 244 ILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRW 303
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
+ ++ P+ ++L CA L A++ G+ +HGYI +N + V +A++ MYAKCG
Sbjct: 304 LLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGR 363
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
++ A IF + KDA W SII + +GK +A+ LF QM G K D +T LSA
Sbjct: 364 LDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSA 423
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
C++ + G+ M + + L LI++ + G L+ A L+ + E NE+
Sbjct: 424 CANIPALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEV 481
Query: 492 IVPLYGALLSACRIYGNVDMGEKLA----ALLEKIESKDSSFHTLLANIYASANRWEDVT 547
+ ++++A +G + + LA L E I+ +F T+L++ + + V
Sbjct: 482 A---WNSIIAAYGYHGY--LADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVR 536
Query: 548 NVRQKMKEMGV 558
R +E G+
Sbjct: 537 YFRCMTEEYGI 547
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 156/346 (45%), Gaps = 48/346 (13%)
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLS 241
GC + PD+ T + CT L N+ LGK I I + + ++L+ +Y GC+
Sbjct: 3 GCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIE 62
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+AR FD+M +K+ + W M++GYV CG+
Sbjct: 63 DARRFFDKMIDKDCVLWNVMINGYVQCGES------------------------------ 92
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
D A+ LF++M KPD +L+ +E G+ +HG + + + +V
Sbjct: 93 -DSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNT 151
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L+ +Y+K + A ++F + + D W +I G NG ++ A LF++MIS G KPD
Sbjct: 152 LVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPD 211
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD-----E 476
ITF L + + +++ ++ +I + +G ++D+ + L+D
Sbjct: 212 SITFTSFLPSLAES----------SSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCR 261
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYG-NVDMGEKLAALLEK 521
+ K+ N + + + +Y A++S + G N D E LL+K
Sbjct: 262 DAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQK 307
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 198/638 (31%), Positives = 332/638 (52%), Gaps = 77/638 (12%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLL---------------- 75
H G+++ A ++F + +++Y ++ A K+GS R ++ L
Sbjct: 158 HVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMI 217
Query: 76 ---------------FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL- 119
F ++ GVSP+ T V KA GE + G +K+ L
Sbjct: 218 AGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLL 277
Query: 120 -------------------------------EFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
D +++D+Y LG + +++ DE
Sbjct: 278 DKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDE 337
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLE 207
MP+++ VSW ++ H + ++AV ++ +M GC P+ S L AC +L++L
Sbjct: 338 MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCR--PNISCFSSVLGACASLQDLR 395
Query: 208 LGKEIHRYINQELEFT----PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
G++IH NQ L+ + +AL+DMYCKC L +A+ +F +P KN++CW S++S
Sbjct: 396 SGRKIH---NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLIS 452
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
GY N ++ +A +LF + P R++ W ++I+GY Q +F +A+ F M P +
Sbjct: 453 GYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEIT 512
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
++L CA L +LE GK +H I + I V TAL +MYAK G ++ + +FYE+
Sbjct: 513 FSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMP 572
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+++ +WT++I GLA NG +++ LF MIS G P++ TF+ +L ACSH GLV+
Sbjct: 573 KRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMH 632
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+F M + I PK +HY C++D+L RAG L EAE+L+ KI +++ + ALLSAC
Sbjct: 633 YFE-MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSE---ANSWAALLSAC 688
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
IY N +MGE+ A L++++ +++ + LL+N+YAS +W+D +R MK + ++K G
Sbjct: 689 NIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGG 748
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
CS ++I G F + H + ++Y MLD + L+
Sbjct: 749 CSWVQIRGQYQAFFSWETKHPLLPDVYEMLDLLTWELI 786
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 311/556 (55%), Gaps = 19/556 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + ++++N L+ +A+ G ++ +F + E+ ++ ++ + A
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVH 185
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G +++ + ++ ++D N +M + K+ + + LFD+MP +D +SWN
Sbjct: 186 NGRIEEA----CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
ISG+ + A +F + P T ++N L E + ++
Sbjct: 242 ISGYAQGGGLSQARRLF-------DESPTRDVFTWTAMVSGYVQNGML-DEAKTFFDEMP 293
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
E + NA++ Y + + ARELF+ MP +N+ W +M++GY G + +AR FD
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
P RD V W A+I GY Q ++EA+ +F E++ ++ L+ CA + ALE G
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K IHG + V AL+ MY KCG I++A + F + EKD SW +++ G A +
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G +AL +F M + G KPD+IT +GVLSACSH GL+D G +F +MT+ Y + P +H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C+IDLLGRAG L+EA++LIR +P + +GALL A RI+GN ++GEK A ++
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPG---AASWGALLGASRIHGNTELGEKAAEMVF 590
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
K+E ++S + LL+N+YA++ RW D +R KM+++GV+KVPG S +E+ IH F VGD
Sbjct: 591 KMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGD 650
Query: 581 PSHSEMKEIYSMLDRM 596
SH E + IY+ L+ +
Sbjct: 651 CSHPEKERIYAYLEEL 666
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 199/426 (46%), Gaps = 55/426 (12%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
++P+ L TH +G+ A +F ++ ++YN +I + + F + LF
Sbjct: 45 KDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFD 104
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
++ ER D F++ V+ TG YV N
Sbjct: 105 QMPER----DLFSWN---------------------VMLTG-----YVRNC--------- 125
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
++ + ++LFD MP+KDVVSWN +SG+ + ++A +VF + MP++ ++
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF-------DNMPEKNSISWNG 178
Query: 198 SACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
+ N + +E + ++ I N L+ + + L +AR LFD+MP ++ I
Sbjct: 179 LLAAYVHNGRI-EEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS 237
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W +M+SGY G L +AR LFD SP RD+ WTAM++GYVQ DEA F EM
Sbjct: 238 WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP---- 293
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+ ++ A++ G Q ++ I + E+ + +I Y + G I +A +
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMD----IARELFESMPCRNISSWNTMITGYGQIGDIAQARK 349
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
F + ++D SW +II G A +G +AL +F ++ G + TF LS C+
Sbjct: 350 FFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAA 409
Query: 438 VDEGRR 443
++ G++
Sbjct: 410 LELGKQ 415
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 179/371 (48%), Gaps = 25/371 (6%)
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+F+ MP + VS+N ISG+++ +F A ++F + MP+ + ++
Sbjct: 71 VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF-------DQMPERDLFSWNVMLTGYVR 123
Query: 205 NLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
N LG + R + E + N+LL Y + G + EARE+FD MP KN I W +++
Sbjct: 124 NCRLG-DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAA 182
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
YV+ G++E+A LF+ D++ W ++ G+V+ + +A LF +M + D
Sbjct: 183 YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPV----RDAISW 238
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+++G AQ G L Q + + + T D TA++ Y + G++++A F E+ E
Sbjct: 239 NTMISGYAQGGGLSQARRLF----DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
K+ S+ ++I G K++ A ELF M ++ +++ G + + R+F
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS----SWNTMITGYGQIGDIAQARKF 350
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
F+ M Q + +I ++G +EA + +I + + +G LS C
Sbjct: 351 FDMMP-----QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 505 IYGNVDMGEKL 515
+++G+++
Sbjct: 406 DIAALELGKQI 416
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 152/320 (47%), Gaps = 9/320 (2%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
T+ I ++F+ +N + N ++ + G++ A K F + +++ +I
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMIT--GYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A+ G + ++L +F ++++ G S + T+ + ++ G+++HG VK G
Sbjct: 368 GYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT 427
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+V N+++ MY G I F+ + +KDVVSWN ++G+ + A+ VF M+
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMK 487
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGC 239
+ PDE T+V LSAC+ L+ G E + ++ P + ++D+ + G
Sbjct: 488 TA-GVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546
Query: 240 LSEARELFDEMP-NKNVICWTSMVSG---YVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
L EA++L MP W +++ + N EKA ++ + ++ ++ + N
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL 606
Query: 296 YVQFNRFDEAVALFREMQII 315
Y R+ +A + +M+ I
Sbjct: 607 YAASGRWVDADKMRSKMRDI 626
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 41/144 (28%)
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
GL+D G +F M E Y + P +HY C+IDLLGR L+E
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE------------------- 818
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
GALL A RI+GN ++GEK A + K+ ++S KM++
Sbjct: 819 -GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRD 856
Query: 556 MGVRKVPGCSSIEINGIIHEFLVG 579
+GV+KVPG S E+ IH F VG
Sbjct: 857 VGVQKVPGYSWFEVQNKIHTFSVG 880
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 214/613 (34%), Positives = 322/613 (52%), Gaps = 85/613 (13%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFV 94
G+L A K+F + ++++N +I+++AK G + +L +FSK+ E G PD+ T V
Sbjct: 176 GSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNV 235
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
+G G++ HG+ V + + + +V N ++DMY G + +F MP KDV
Sbjct: 236 LPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDV 295
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQ-------------------------------- 182
VSWN ++G+ + RFEDAV +F +M++
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 183 --GCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP-------IMGNALLD 232
+ P+E T++S LS C ++ L GKEIH Y I ++ ++ N L+D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLID 415
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR-SPV-RDIVLWT 290
MY KC +++ AR +FD SP RD+V WT
Sbjct: 416 MYAKCK-------------------------------KVDIARAMFDSLSPKERDVVTWT 444
Query: 291 AMINGYVQFNRFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
MI GY Q ++A+ L EM + + +P+ F + L CA L AL GK IH Y
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYAL 504
Query: 349 ENRI-TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
N+ V V+ LI+MYAKCG I A +F + EK+ +WTS++ G M+G +AL
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+F +M G K D +T + VL ACSH G++D+G +FN M + + P EHY CL+DL
Sbjct: 565 GIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDL 624
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG L+ A LI ++P E ++ + ALLS CRI+G V++GE A + ++ S +
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVV---WVALLSCCRIHGKVELGEYAAKKITELASNND 681
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE-INGIIHEFLVGDPSHSEM 586
+TLL+N+YA+A RW+DVT +R M+ G++K PGCS +E I G F VGD +H
Sbjct: 682 GSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTT-TFFVGDKTHPHA 740
Query: 587 KEIYSML-DRMAK 598
KEIY +L D M +
Sbjct: 741 KEIYQVLSDHMQR 753
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/562 (31%), Positives = 286/562 (50%), Gaps = 32/562 (5%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLN-KLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYN 57
++Q+K I ++ G+ TLN + T+ S G L +A + + +N
Sbjct: 41 ISQVKLIHQKLLSFGIL----TLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+++ G K L F + +PDN+T+PFVFKA G + V+ G+ H T
Sbjct: 97 SLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVT 156
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G + +V N+++ MY G + + +K+FDEMP DVVSWN I + K + + A+++F
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
+M PD+ T+V+ L C ++ LGK+ H + + E+ +GN L+DMY K
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR----DIVLWTAM 292
G + EA +F MP K+V+ W +MV+GY G+ E A LF++ D+V W+A
Sbjct: 277 FGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAA 336
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY------ 346
I+GY Q EA+ + R+M +KP++ L+++L+GCA +GAL GK IH Y
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396
Query: 347 -INENRITVDAVVATALIEMYAKCGLIEKALEIFYEL--REKDAASWTSIICGLAMNGKI 403
+ +N + +V LI+MYAKC ++ A +F L +E+D +WT +I G + +G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 404 NKALELFSQMISGG--AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
NKALEL S+M +P+ T L AC+ + G++ Q L
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVS 516
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
CLID+ + G + +A L+ E NE+ + +L++ YG GE+ + E+
Sbjct: 517 NCLIDMYAKCGDIGDA-RLVFDNMMEKNEVT---WTSLMTG---YGMHGYGEEALGIFEE 569
Query: 522 IESKDSSFH--TLLANIYASAN 541
+ TLL +YA ++
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSH 591
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 316/587 (53%), Gaps = 75/587 (12%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLF---SKLRE------RGVSPDNFTYPFVFKAVGWLGEVK 105
A + L+K K +F++++ + +LRE P TY + + L +
Sbjct: 47 AKDELVKRLCKDNNFKEAIDILCEQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALD 106
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
+G KVH + +G + N I+DMY + N K+LFDEM ++D+ SWN+ ISG+
Sbjct: 107 EGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYA 166
Query: 166 KCMRF-------------------------------EDAVDVFRRMRQGCNLMPDEGTVV 194
K R E+A+++FR M++ N ++ T+
Sbjct: 167 KAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMS 226
Query: 195 STLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
S L+A A+++L LGKEIH +I + L+ ++ +AL DMY K
Sbjct: 227 SALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGK----------------- 269
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
CG + +AR +FD++ RD+V WTAMI+ Y + R +E ALF ++
Sbjct: 270 --------------CGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLL 315
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+ P++F +L CA A E GK +HGY+ + A+ L+ MY KCG I+
Sbjct: 316 KSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIK 375
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A +F + D SWTS+I G A NG+ ++AL+ F ++ G +PD ITF+GVLSAC+
Sbjct: 376 NARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACT 435
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H GLVD+G +F+++ E + + +HY CLIDLL R+G L EAE++I K+P E ++
Sbjct: 436 HAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKF-- 493
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
L+ +LL CRI+GN+ + ++ A L +IE ++ + +T LANIYA+A W V VR+ M
Sbjct: 494 -LWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVM 552
Query: 554 KEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
GV K PG S IEI +H FLVGD SH++ KEI+ L +++K +
Sbjct: 553 DARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRM 599
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 146/303 (48%), Gaps = 17/303 (5%)
Query: 5 KQIQAQIFQIGLQQNP---ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
K+I I +IGL + L+ + C G++ A IF ++++ +I
Sbjct: 242 KEIHGHILRIGLDLDGVVWSALSDMYGKC-----GSIGEARHIFDKTVDRDVVSWTAMID 296
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ K+G + LFS L + G+ P+ FT+ V A + G++VHGY+ + G +
Sbjct: 297 RYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDP 356
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
++ ++++ MY G I N +++F+ MP D+VSW ISG+ + + ++A+ F +
Sbjct: 357 SSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLL 416
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGC 239
+ PD T V LSACT ++ G E I ++ L T L+D+ + G
Sbjct: 417 KS-GTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGR 475
Query: 240 LSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEKARD----LFDRSPVRDIVLWTAMIN 294
L EA ++ D+MP + W S++ G G L+ A+ LF+ P + +T + N
Sbjct: 476 LQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEP-ENPATYTTLAN 534
Query: 295 GYV 297
Y
Sbjct: 535 IYA 537
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 96/250 (38%), Gaps = 45/250 (18%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ + +IG +P + + + GN+ A ++F + P L+++ LI +A
Sbjct: 343 KQVHGYMTRIGF--DPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYA 400
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG-EKVHGYVVKTGLEF-- 121
+ G ++L F L + G PD+ T+ V A G V KG E K GL
Sbjct: 401 QNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTA 460
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D Y C ++D+ G++ + + D+MP
Sbjct: 461 DHYAC--LIDLLSRSGRLQEAEDIIDKMP------------------------------- 487
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC-- 239
+ PD+ S L C NL+L K + + P L ++Y G
Sbjct: 488 ----IEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWG 543
Query: 240 -LSEARELFD 248
++E R++ D
Sbjct: 544 GVAEVRKVMD 553
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 181/466 (38%), Positives = 275/466 (59%), Gaps = 23/466 (4%)
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
I GH + V+++ RM + P+E T + C + L G+++H R +
Sbjct: 2 IRGHSQSETPHKLVELYNRMVEA-EAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 220 LEFTPIMGNALLDMYCKCGC---LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
+ +L+++Y G + +AR +FDE+ ++N++ W S+++GYV CG ++ AR
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
+FD P R++V WT MI G Q R +A+ LF EM+ +K D+ LVA L+ CA+LG
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 337 LEQGKWIHGYINENRITVD----AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
L+ G WIH YI+E + + +LI MYA CG+I+KA ++F ++++ SWTS
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTS 240
Query: 393 IICGLAMNGKINKALELFSQMISGG---AKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
+I G A G +AL +F M G +PD ITFIGVL ACSH G VD+GR FF M
Sbjct: 241 MITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMN 300
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+ + I P++EHYGC++DLL RAG LDEA LI +P + N+ + +GALL CRI+ N
Sbjct: 301 KKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAV---WGALLGGCRIHKNA 357
Query: 510 DMGEKLAA--LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
++ +A LE + + + LL+N+YA+A RW+DV VRQKM E+GVRK G S +
Sbjct: 358 ELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWV 417
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDNL 613
+ING++H+F+ GD +H +Y ML ++ ++Q +EG L
Sbjct: 418 QINGVVHDFVAGDWTHKHASSVYEMLSKI------TRQAKLEGYKL 457
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 188/407 (46%), Gaps = 77/407 (18%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+I+ ++ + K + L++++ E P+ FTY F+ +++GE+VHG VV G
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKK---------------------------------- 144
+ +V S++++Y + G V+K
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+FDEMP+++VVSW I+G + R + A+ +F MR+ + D+ +V+ LSAC L
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRA-GVKLDQVALVAALSACAELG 179
Query: 205 NLELGKEIHRYINQELEF--TPI---MGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
+L+LG IH YI++ L P+ + N+L+ MY CG + +A ++F M ++ I WT
Sbjct: 180 DLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWT 239
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
SM++G+ G E+A +F ++Q DE +P
Sbjct: 240 SMITGFAKQGHAEEALGVFQ----------------WMQRLGTDEG------------RP 271
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEI 378
D + +L C+ G ++QG+ +N+ V + ++++ ++ G +++A +
Sbjct: 272 DGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRL 331
Query: 379 FYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGGA---KPD 421
+ K + A W +++ G +I+K EL S + A KPD
Sbjct: 332 IESMPMKPNDAVWGALLGGC----RIHKNAELASHVAQKLALELKPD 374
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +IF + ++++ +I A+ G +++L LF ++R GV D
Sbjct: 113 GDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAAL 172
Query: 96 KAVGWLGEVKKGEKVHGYV---VKTGLE-FDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A LG++K G +H Y+ + G + + NS++ MY G I K+F M
Sbjct: 173 SACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQ 232
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNL-MPDEGTVVSTLSACTALKNLELG 209
+ +SW I+G K E+A+ VF+ M R G + PD T + L AC+ ++ G
Sbjct: 233 RSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQG 292
Query: 210 KEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG 264
+ +N++ P + + ++D+ + G L EA L + MP K N W +++ G
Sbjct: 293 RHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGG 350
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 37/223 (16%)
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI G+ Q + V L+ M +P++F L+ GCA+ L +G+ +HG + N
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 352 ITVDAVVATALIEMYA----------------------------------KCGLIEKALE 377
+ V T+L+ +YA +CG ++ A
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
IF E+ E++ SWT++I G A G+ +AL LF +M G K D + + LSAC+ G
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 438 VDEGRRFFNTMTEVYQI--QPKLEHY-GCLIDLLGRAGLLDEA 477
+ G + + E QP L LI + G++D+A
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKA 223
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 314/591 (53%), Gaps = 34/591 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F + +A+N ++ ++++ G +++L LF +R PD FT+
Sbjct: 19 GRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATL 78
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM------ 149
A LGE+++G K+H VV +G + V NS++DMYG + +++F+EM
Sbjct: 79 SACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEV 138
Query: 150 -------------------------PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
P K ++WN+ ISG+ +C E + +F++MR+
Sbjct: 139 SWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMRED- 197
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEA 243
+L PD+ T + ++A L+ G +H +I + + + N++L Y K GC +
Sbjct: 198 SLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDV 257
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++F+ + + W +M+ ++ G +A +F +P +++V WT+MI GY + +
Sbjct: 258 MKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGE 317
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
+A++ F +M ++PD F A+L C+ L L GK IHG I V L+
Sbjct: 318 QALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLV 377
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
MYAKCG I+ + F E+ KD SW +++ GL M+G +ALEL+ +M++ G KPD +
Sbjct: 378 NMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKV 437
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFIG+L CSH GL+++G+ F +M VY + + EH C++DLLGR G L +A EL+ +
Sbjct: 438 TFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDE 497
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+ L ALL AC + V MG L L+ E + + LL+N+Y + +W
Sbjct: 498 Y-SRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQW 556
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
++ VR+ M + GV+K+PGCS IE+ + F+ G+ SH M+E+ +L+
Sbjct: 557 KEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILN 607
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 186/381 (48%), Gaps = 34/381 (8%)
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
LG+I + ++LFDEMP KD V+WN ++ + + + A+ +F MR N PD T +
Sbjct: 18 LGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIA-NSRPDRFTFTA 76
Query: 196 TLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
TLSAC L L G +IH + + + + +GN+L+DMY KC + AR +F+EM N
Sbjct: 77 TLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMN 136
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
+ W S++ Y + G + AR +FD P + + W MI+GY Q + + LF++M+
Sbjct: 137 EVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMRE 196
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
L+PD++ AL+ +L G +HG+I ++ V+ +++ Y+K G +
Sbjct: 197 DSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDD 256
Query: 375 ALEIFYEL-------------------------------REKDAASWTSIICGLAMNGKI 403
+++F + EK+ SWTS+I G A NG
Sbjct: 257 VMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHG 316
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
+AL F +M+ +PDD TF VL ACS + G+ ++ Y ++
Sbjct: 317 EQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIH-YGFHAYVDVGNG 375
Query: 464 LIDLLGRAGLLDEAEELIRKI 484
L+++ + G + + ++I
Sbjct: 376 LVNMYAKCGDIQGSNTAFKEI 396
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 164/390 (42%), Gaps = 63/390 (16%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
+ S G A +F + +A+N++I + + G L LF K+RE + PD +T
Sbjct: 146 AYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWT 205
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
+ + A+ L E G +HG+++K+G V NSI+ Y LG +V K+F+ +
Sbjct: 206 FSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIG 265
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFR----------------RMRQGC---------- 184
VSWN I H+K +A VF+ R G
Sbjct: 266 ILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVK 325
Query: 185 ----NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGC 239
++ PD+ T + L AC++L L GK IH I+ +GN L++MY KCG
Sbjct: 326 MMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGD 385
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ + F E+ K+++ W +M+ G G +A +L++
Sbjct: 386 IQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYE-------------------- 425
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI-HGYINENRITVDAVV 358
EM +KPDK + LL C+ G +E+G+ + ++ ++ +
Sbjct: 426 -----------EMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEH 474
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAA 388
++++ + G + +A E+ E A
Sbjct: 475 VVCMVDLLGRGGYLAQARELVDEYSRTGRA 504
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 5/210 (2%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
TS + G++ AR LFD P +D V W AM+ Y Q +A+ LF M+I +
Sbjct: 9 TSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSR 68
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
PD+F A L+ CA LG L +G IH + + V +LI+MY KC A +
Sbjct: 69 PDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
F E+ + SW S++ +G + A +F M K +I + ++S G V
Sbjct: 129 FEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGM----PKKVEIAWNIMISGYGQCGDV 184
Query: 439 DEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
+ F M E +QP + L++ L
Sbjct: 185 ELCLGLFKKMRED-SLQPDQWTFSALVNAL 213
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/460 (38%), Positives = 276/460 (60%), Gaps = 9/460 (1%)
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
++ ++ VSW I+ + R +A F MR + P+ T ++ LS C +
Sbjct: 28 LNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLA-GVEPNHITFIAILSGCGDFPS 86
Query: 206 LE--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
LG +H Y + L+ +M G A++ MY K G + +AR +FD M +KN + W +M
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTM 146
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ GY+ GQ++ A +FD+ P RD++ WTAMING+V +EA+A FREMQI +KPD
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDY 206
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
++A L C LGAL G W+H Y+ + V+ +LI++Y +CG +E A ++F +
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDK 266
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ ++ SW S+I G A NG +++L F +M KPD +TF G L+ACSH GLV+EG
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEG 326
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
R+F M Y+I P++EHYGCL+DL RAG L++A +L++ +P + NE+++ G+LL+
Sbjct: 327 LRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI---GSLLA 383
Query: 502 ACRIYG-NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
ACR +G N + EKL L + K S + +L+N+YA+ +WE + +R+KMK +G++K
Sbjct: 384 ACRNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PG SSIEI+ H F+ GD +H E I +L ++ L
Sbjct: 444 QPGFSSIEIDDCTHVFMAGDSAHVETTNICEVLKLISSNL 483
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 172/368 (46%), Gaps = 68/368 (18%)
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL--GEVKKGEKVH 111
+++ I + G ++ FS +R GV P++ T+ + G G G+ +H
Sbjct: 37 VSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALGDLLH 96
Query: 112 GYVVKTGLE--------------------------FD------TYVCNSIMDMYGVLGKI 139
GY K GL+ FD + N+++D Y G++
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 140 CNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSA 199
N K+FD+MP++D++SW I+G V E+A+ FR M Q + PD +++ L+A
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREM-QISGVKPDYVAIIAALNA 215
Query: 200 CTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
CT L L G +HRY+ +Q+ + + N+L+D+YC+CGC+ AR++FD+M + V+ W
Sbjct: 216 CTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSW 275
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
S++ G+ G E++ FR+MQ R K
Sbjct: 276 NSVIVGFAANGNAH-------------------------------ESLVYFRKMQEERFK 304
Query: 319 PDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
PD LT C+ +G +E+G ++ I++ RI+ L+++Y++ G +E AL+
Sbjct: 305 PDAVTFTGALTACSHVGLVEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 378 IFYELREK 385
+ + K
Sbjct: 365 LVQSMPMK 372
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 8/290 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + L+++ +I F KG ++L F +++ GV PD
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAAL 213
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G VH YV+ + + V NS++D+Y G + +++FD+M + VV
Sbjct: 214 NACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVV 273
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G +++ FR+M++ PD T L+AC+ + +E G +
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEE-RFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQ-- 270
+ + +P + + L+D+Y + G L +A +L MP K N + S+++ N G
Sbjct: 333 MISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNHGNNT 392
Query: 271 --LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
EK V+ + + N Y +++ A + R+M+ + LK
Sbjct: 393 VLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 442
>gi|242082329|ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
gi|241942283|gb|EES15428.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
Length = 498
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/479 (38%), Positives = 281/479 (58%), Gaps = 19/479 (3%)
Query: 16 LQQNPETLNKLMVFCTHPSHGNLLYA--EKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSL 73
++Q+P+ L ++ PSH NL A F S +NLLI A A S R S
Sbjct: 20 IRQSPDHLR--LIIPHLPSHPNLAAALSSLYFPLFPSSATFLHNLLIHASAASPSPRLSF 77
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK-GEKVHGYVVKTGLEFDTYVCNSIMDM 132
FS L G PD+FT+P + K+ L + G +V+ + G DT+V NS++ M
Sbjct: 78 AAFSSLLRSGYLPDHFTFPPLVKSASRLSSFPRTGAQVYAQAARRGFLADTFVVNSLLAM 137
Query: 133 YGVLGKICNVKKLFDEMPD-KDVVSWNVSISGHVKCMRFEDAVDVFRRM--RQGCNLMPD 189
Y +++ +F+ + DVVSWN + G+ KC +A VF M R G +
Sbjct: 138 YAAFRDTASMRAVFESCAEVADVVSWNTVVFGYAKCGEIGNARRVFDEMPHRNGVSWSVM 197
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
G + A + + I R I I N ++ + + G L AR++FDE
Sbjct: 198 VGAYAAAGELDVAREMFDRMPAIGRNI--------ITWNLMVTGFGRHGLLPLARKMFDE 249
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
MP +N++ W +M+ GY G+++ AR+LFD P +D+V WT MI+GY Q R+ + + LF
Sbjct: 250 MPIRNIVSWNAMLRGYAMNGEMDVARELFDVMPEKDVVSWTCMISGYAQAGRYAQTLELF 309
Query: 310 REMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV--VATALIEMY 366
R MQ ++P++ +V++L+ CA L ALE+G+W H +I+++++ +D + ALI+MY
Sbjct: 310 RTMQSHGDIRPNEVTMVSVLSACAHLTALEEGRWAHVFIDKHKMVLDNEFNLGAALIDMY 369
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKCG + A +IF+ L +K+ ++W ++I GLA+N + +++F QM KPDDITF+
Sbjct: 370 AKCGRTDLATKIFHSLDQKNVSAWNALITGLAVNSDARRCIDVFEQMKMSEEKPDDITFV 429
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
VL+AC+H GLVDEGR++F +M+ +QP+L+HYGC++DLLGRAGLLDEAEELIR +P
Sbjct: 430 SVLTACAHAGLVDEGRQYFQSMSSACGVQPELKHYGCMVDLLGRAGLLDEAEELIRGMP 488
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 322/609 (52%), Gaps = 19/609 (3%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ A+I ++ + +KL+ F T A +F I +YN L+ A+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTR--QDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 66 KGSFRKSLLLF------SKLRERGVSPDNFTYPFVFKAVG-----WLGEVKKGEKVHGYV 114
+ + + LF S PD+ + V KA+ WLG + + +VHG+V
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLAR--QVHGFV 158
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
++ G + D +V N ++ Y I + +K+FDEM ++DVVSWN ISG+ + FED
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDM 233
+++ M + P+ TV+S AC +L G E+H+ I ++ + NA++
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG L AR LFDEM K+ + + +++SGY+ G +++A LF + W AMI
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMI 338
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+G +Q N +E + FREM +P+ L +LL L+ GK IH + N
Sbjct: 339 SGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD 398
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ V T++I+ YAK G + A +F +++ +WT+II A++G + A LF QM
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G KPDD+T VLSA +H G D + F++M Y I+P +EHY C++ +L RAG
Sbjct: 459 QCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGK 518
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L +A E I K+P + I ++GALL+ + G++++ L ++E +++ +T++
Sbjct: 519 LSDAMEFISKMPIDP---IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIM 575
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
AN+Y A RWE+ VR KMK +G++K+PG S IE + F+ D S KE+Y ++
Sbjct: 576 ANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEII 635
Query: 594 DRMAKTLLD 602
+ + +++ D
Sbjct: 636 EGLVESMSD 644
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 328/601 (54%), Gaps = 46/601 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ A ++GL + + +V + G + A + F ++ + A+N ++ +
Sbjct: 89 QLHACALRLGLLRGDAFASGALVH-AYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCR 147
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+++ LF ++ GV+ D T V LG+ +H Y VK GL+ + +V
Sbjct: 148 NARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFV 207
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
CN+++D+YG LG + V+K+FD M +D+V+WN ISGH + + AV++F MR
Sbjct: 208 CNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRD-SG 266
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIM-GNALLDMYCKCGCLSEA 243
+ PD T++S SA ++ G+ +H Y + + + I+ GNA++DMY K
Sbjct: 267 VSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLS----- 321
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++E A+ +FD PVRD V W +I GY+Q
Sbjct: 322 --------------------------KIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLAS 355
Query: 304 EAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ ++ MQ LKP + V++L + LGAL+QG +H + + +D V T +
Sbjct: 356 EAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCV 415
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I++YAKCG +++A+ +F + + W ++I G+ ++G KAL LFSQM G PD
Sbjct: 416 IDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDH 475
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+TF+ +L+ACSH GLVD+GR FFN M Y I+P +HY C++D+ GRAG LD+A + IR
Sbjct: 476 VTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIR 535
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + + I +GALL ACRI+GNV+MG+ + L +++ K+ ++ L++N+YA +
Sbjct: 536 NMPIKPDSAI---WGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGK 592
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD-----PSHSEMKEIYSMLDRMA 597
W+ V VR ++ ++K PG SSIE+ ++ F G+ P H E++ +LD +A
Sbjct: 593 WDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQR--ELLDLLA 650
Query: 598 K 598
K
Sbjct: 651 K 651
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 298/521 (57%), Gaps = 43/521 (8%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
+ PD Y + K LG++K+G+ VH +V+ + + D + NS++ MY G + +
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
+LFDEMP +D+VSW I+G+ + R DA+ +F RM P+E T+ S + C +
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSD-GAEPNEFTLSSLVKCCGYM 188
Query: 204 KNLELGKEIH----RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
+ G++IH +Y F +G++L+DMY +CG L EA +FD++ KN + W
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVF---VGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWN 245
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
++++GY G+ E EA+ALF MQ +P
Sbjct: 246 ALIAGYARKGEGE-------------------------------EALALFVRMQREGYRP 274
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+F ALL+ C+ +G LEQGKW+H ++ ++ + V L+ MYAK G I A ++F
Sbjct: 275 TEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVF 334
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
+L + D S S++ G A +G +A + F +MI G +P+DITF+ VL+ACSH L+D
Sbjct: 335 DKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLD 394
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG+ +F M + Y I+PK+ HY ++DLLGRAGLLD+A+ I ++P E V ++GAL
Sbjct: 395 EGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPT---VAIWGAL 450
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
L A +++ N +MG A + +++ HTLLANIYASA RWEDV VR+ MK+ GV+
Sbjct: 451 LGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVK 510
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
K P CS +E+ +H F+ D +H + ++I+ M +++ + +
Sbjct: 511 KEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKI 551
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 174/368 (47%), Gaps = 36/368 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F + ++++ +I +A+ +LLLF ++ G P+ FT +
Sbjct: 123 GSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLV 182
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
K G++ G ++H K G + +V +S++DMY G + +FD++ K+ V
Sbjct: 183 KCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEV 242
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
SWN I+G+ + E+A+ +F RM R+G P E T + LS+C+++ LE GK +H
Sbjct: 243 SWNALIAGYARKGEGEEALALFVRMQREG--YRPTEFTYSALLSSCSSMGCLEQGKWLHA 300
Query: 215 YI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
++ + +GN LL MY K G + +A ++FD++ +V+ SM+ GY G ++
Sbjct: 301 HLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKE 360
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
A FD EM ++P+ +++LT C+
Sbjct: 361 AAQQFD-------------------------------EMIRFGIEPNDITFLSVLTACSH 389
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTS 392
L++GK G + + I ++++ + GL+++A E+ E A W +
Sbjct: 390 ARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGA 449
Query: 393 IICGLAMN 400
++ M+
Sbjct: 450 LLGASKMH 457
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 296/564 (52%), Gaps = 77/564 (13%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ L Q A + GL +P T+ +L+ PS +L +A+ IF +P +N +I
Sbjct: 25 SHLHQAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHAKTIFLHTHNPSPFMFNTII 84
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A ++ S+ + + G PDNFT+PF+ K+ G ++H +VVK GL+
Sbjct: 85 MASSRT---LDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLD 141
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +V N N+ L+ FR +
Sbjct: 142 RDVFVVN-------------NMIALYSS----------------------------FREL 160
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
R + + ++V +S T L+ + G +
Sbjct: 161 RSARKVFDESYSLVDVVSWTT----------------------------LITGFSNSGQI 192
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
EAR++FD MP KN + W +M+SGY ++ +AR LFD P RD W+AM++GY Q
Sbjct: 193 DEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLG 252
Query: 301 RFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+EA+ LF EM ++ P++ LV+ ++ CAQL ALE+G+W+H YI E ++ ++ +
Sbjct: 253 MCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLG 312
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
T L++MY KCG I A +F + E++ SW S+I GLA+NG +AL LF +M G
Sbjct: 313 TVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPS 372
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P+ ITFI +L+ CSH GL+ EGR F+ MT+VY I+P+L+HYGC++DLLGRAGL+ EA +
Sbjct: 373 PNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALD 432
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+ K+P + + L+GAL+ ACRI+G V++GE+L L +E + LL NI+A+
Sbjct: 433 FVEKMPMKPHS---ELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAA 489
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPG 563
A RW+DV VR K V K PG
Sbjct: 490 AQRWDDVAMVRDLEKGRKVLKNPG 513
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 323/595 (54%), Gaps = 40/595 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI A I + G +++ +N L+ ++ G + A K+F + + ++++ L+ +
Sbjct: 269 KQIHAHILRYGHEKDASLMNVLID--SYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYK 326
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ ++++ LF+ + + G+ PD F + + L ++ G +VH Y +K L D+Y
Sbjct: 327 QNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSY 386
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC---MRFEDAVDVFRRMR 181
V NS++DMY + +K+FD DVV +N I G+ + DA+++F MR
Sbjct: 387 VTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMR 446
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+ P T VS L A +L +L L K+IH
Sbjct: 447 FRL-IRPSLLTFVSLLRASASLTSLGLSKQIHGL-------------------------- 479
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+F N ++ +++++ Y NC L+ +R +FD V+D+V+W +M +GYVQ +
Sbjct: 480 ----MFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSE 535
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+EA+ LF E+Q+ R +PD+F V ++T L +L+ G+ H + + + + + A
Sbjct: 536 NEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNA 595
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
L++MYAKCG E A + F +D W S+I A +G+ KAL++ +M+ G +P+
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPN 655
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
ITF+GVLSACSH GLV++G + F M + I+P+ EHY C++ LLGRAG L+EA ELI
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELI 714
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
K+P + I+ + +LLS C GNV++ E A + + KDS TLL+NIYAS
Sbjct: 715 EKMPTKPAAIV---WRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKG 771
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
W D VR++MK GV K PG S IEIN +H FL D SH + +IY +LD +
Sbjct: 772 MWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 212/434 (48%), Gaps = 41/434 (9%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ QI GL+ + N LM + G ++YA K+F + L+ ++ ++ A
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRA--GGMVYARKVFEKMPERNLVTWSTMVSACNHH 123
Query: 67 GSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGE--KVHGYVVKTGLEFDT 123
G + +SL++F R R SP+ + +A L + ++ ++VK+ + D
Sbjct: 124 GFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDV 183
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YV ++D Y G I + +FD +P+K V+W ISG VK R ++ +F ++ +G
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
N++PD + + LSAC+ L LE GK+IH +I E + N L+D Y KCG +
Sbjct: 244 -NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRA 302
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +LFD MPNKN+I WT+++SG Y Q +
Sbjct: 303 AHKLFDGMPNKNIISWTTLLSG-------------------------------YKQNSLH 331
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ LF M LKPD F ++LT CA L ALE G +H Y + + D+ V +L
Sbjct: 332 KEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSL 391
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICG---LAMNGKINKALELFSQMISGGAK 419
I+MYAKC + +A ++F D + ++I G L +++ AL +F M +
Sbjct: 392 IDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIR 451
Query: 420 PDDITFIGVLSACS 433
P +TF+ +L A +
Sbjct: 452 PSLLTFVSLLRASA 465
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 184/379 (48%), Gaps = 43/379 (11%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
VHG ++ +GLE DTY+ N +M++Y G + +K+F++MP++++V+W+ +S
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL--KNLELGKEIHRY-INQELEFTPIM 226
+E+++ VF + P+E + S + AC+ L + ++ + + + +
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
G L+D Y K G + AR +FD +P K+ + WT+M+SG V G+
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR---------------- 229
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
YV ++ LF ++ + PD +IL +L+ C+ L LE GK IH +
Sbjct: 230 --------SYV-------SLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I DA + LI+ Y KCG + A ++F + K+ SWT+++ G N +A
Sbjct: 275 ILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEA 334
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL--EHY--G 462
+ELF+ M G KPD +L++C+ ++ F T Y I+ L + Y
Sbjct: 335 MELFTSMPKFGLKPDMFACSSILTSCASLHALE-----FGTQVHAYTIKANLGNDSYVTN 389
Query: 463 CLIDLLGRAGLLDEAEELI 481
LID+ + L EA ++
Sbjct: 390 SLIDMYAKCDCLTEARKVF 408
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 127/277 (45%), Gaps = 40/277 (14%)
Query: 240 LSEARELFDEMPNKNVICWTSMVSG--------------YVNCGQLEKARDLFDRSPVRD 285
L + R L D + NV+ +VSG Y G + AR +F++ P R+
Sbjct: 50 LLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERN 109
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRL-KPDKFILVALLTGCAQLGALEQGKW-- 342
+V W+ M++ ++E++ +F + R P+++IL + + C+ L G+W
Sbjct: 110 LVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDG--SGRWMV 167
Query: 343 --IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+ ++ ++R D V T LI+ Y K G I+ A +F L EK +WT++I G
Sbjct: 168 FQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ +L+LF Q++ G PD VLSACS ++ G+ QI +
Sbjct: 228 GRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGK----------QIHAHILR 277
Query: 461 YG---------CLIDLLGRAGLLDEAEELIRKIPNEN 488
YG LID + G + A +L +PN+N
Sbjct: 278 YGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKN 314
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/617 (33%), Positives = 334/617 (54%), Gaps = 51/617 (8%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I A + + N N L+ + G + A IF ++ +++N ++ F +
Sbjct: 304 IHATVLKSSYYINVFVANALIAM--YARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQN 361
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G + ++L + ++R+ G PD + A G G ++H Y +K GL+ D V
Sbjct: 362 GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVG 421
Query: 127 NSIMDMYGVLGKICNVKKL---FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-Q 182
NS++DMY K C++K + FD+MPDKDVVSW I+GH + A+++FR ++ +
Sbjct: 422 NSLVDMYA---KFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLE 478
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
G +L D + S L AC+ LK + KEIH YI ++ ++ N ++D+Y +CG
Sbjct: 479 GIDL--DVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECG---- 532
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
++ A +F+ +D+V WT+MI+ YV
Sbjct: 533 ---------------------------NVDYAARMFELIEFKDVVSWTSMISCYVHNGLA 565
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+EA+ LF M+ ++PD LV++L+ A L AL++GK IHG++ ++ +A+ L
Sbjct: 566 NEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTL 625
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++MYA+CG +EK+ +F +R KD WTS+I M+G A++LF +M PD
Sbjct: 626 VDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDH 685
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
I F+ VL ACSH GL++EGRRF +M YQ++P EHY CL+DLLGRA L+EA + ++
Sbjct: 686 IAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVK 745
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+ E ++ ALL AC+I+ N ++GE A L +++ ++ + L++N+Y++ R
Sbjct: 746 GMEVEPT---AEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERR 802
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
W+DV VR +MK G++K PGCS IE+ +H F+ D SH + EIYS L ++ + L
Sbjct: 803 WKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKL-- 860
Query: 603 SKQNAMEGDNLVAINFL 619
A EG + F+
Sbjct: 861 ----AKEGGYVAQTKFV 873
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 257/562 (45%), Gaps = 79/562 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+++ +Q+ A + N L+ +VF + G L+ AEK+F + + +N +I
Sbjct: 94 LSEGQQVHAHMITSNALFNSVFLSTRLVF-MYGKCGCLVDAEKLFDGMPHKTIFTWNAMI 152
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A+ G SL L+ ++R G+ D T+P + KA G L + + G +VHG +K G
Sbjct: 153 GAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYV 212
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVKCMRFEDAVDVFRR 179
+V NSI+ MY + ++LFD MP+K DVVSWN IS + + +A+ +F
Sbjct: 213 SIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGE 272
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCG 238
M Q +L P+ T V+ L AC ++ G IH + + + + + NAL+ MY + G
Sbjct: 273 M-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFG 331
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ EA +F M + + I W SM+SG+V G
Sbjct: 332 KMGEAANIFYNMDDWDTISWNSMLSGFVQNG----------------------------- 362
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ EA+ + EM+ KPD +++++ A+ G G IH Y +N + D V
Sbjct: 363 --LYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQV 420
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+L++MYAK ++ IF ++ +KD SWT+II G A NG ++ALELF ++ G
Sbjct: 421 GNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGI 480
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV--YQIQPKLEHYGCLIDLLGRAGLLDE 476
D + +L ACS G + +++ E+ Y I+ L DL+ + G++D
Sbjct: 481 DLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKGLS------DLVLQNGIVD- 526
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
+YG GNVD A + E IE KD T + +
Sbjct: 527 ------------------VYGEC-------GNVDYA---ARMFELIEFKDVVSWTSMISC 558
Query: 537 YASANRWEDVTNVRQKMKEMGV 558
Y + + MKE GV
Sbjct: 559 YVHNGLANEALELFHLMKETGV 580
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 305/555 (54%), Gaps = 36/555 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
+ ++F S+ + L +YN +I +A+ ++L +F L++ G+ D + +A
Sbjct: 266 SNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAV 325
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ +G +VHG +K+ + + V N+I+DMYG G + +F+EM +D VSWN
Sbjct: 326 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 385
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
I+ H + E + +F M Q + PDE T S L AC + L G EIH R I
Sbjct: 386 IAAHEQNGNEEKTLSLFVWMLQS-GMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR 444
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ +G AL+DMY KCG +EKA L D
Sbjct: 445 MGLDSFVGIALIDMYSKCG-------------------------------MMEKAEKLHD 473
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
R + +V W A+I+G+ + +EA F +M + + PD F +L CA L +E
Sbjct: 474 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 533
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GK IH I + + DA +++ L++MY+KCG ++ IF + +D +W +++CG A
Sbjct: 534 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 593
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G +AL++F M KP+ TF+ VL AC H GLV++G +F++M Y + P+LE
Sbjct: 594 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 653
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY C++D++GR+G + +A ELI +P E + +I + LLS C+I+GNV++ EK A +
Sbjct: 654 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVI---WRTLLSXCKIHGNVEVAEKAAYSI 710
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E +DS+ + LL+NIYA+A W +VT +R+ M+ G++K PGCS IEI +H FLVG
Sbjct: 711 LQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVG 770
Query: 580 DPSHSEMKEIYSMLD 594
D +H KEIY LD
Sbjct: 771 DKAHPRSKEIYENLD 785
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 186/374 (49%), Gaps = 35/374 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L+ A +F + S +++N +I A + G+ K+L LF + + G+ PD FTY V
Sbjct: 362 GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVL 421
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA + G ++H ++K+ + D++V +++DMY G + +KL D + ++ VV
Sbjct: 422 KACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVV 481
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-R 214
SWN ISG + E+A F +M + + PD T + L C L +ELGK+IH +
Sbjct: 482 SWNAIISGFSLQKQSEEAQKTFSKMLE-MGVDPDNFTYATILDTCANLVTVELGKQIHAQ 540
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I +EL+ + + L+DMY KCG + + + +F++ PN++ + W +MV GY G E
Sbjct: 541 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGE-- 598
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
EA+ +F MQ+ +KP+ +A+L C +
Sbjct: 599 -----------------------------EALKIFEYMQLENVKPNHATFLAVLRACGHM 629
Query: 335 GALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTS 392
G +E+G + H ++ + + ++++ + G + KALE+ + E DA W +
Sbjct: 630 GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRT 689
Query: 393 IICGLAMNGKINKA 406
++ ++G + A
Sbjct: 690 LLSXCKIHGNVEVA 703
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 193/382 (50%), Gaps = 35/382 (9%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK-KLFDEMPDKDVVSWNVSISGHVKC 167
++HG+ +KT D + + +DMY + + +LF+ +P+ ++ S+N I G+ +
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARS 291
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-M 226
+ +A+ +FR + Q L DE ++ AC +K G ++H + L + I +
Sbjct: 292 DKGIEALGMFRLL-QKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICV 350
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
NA+LDMY KCG L EA +F+E MVS RD
Sbjct: 351 ANAILDMYGKCGALVEACLVFEE-----------MVS--------------------RDA 379
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V W A+I + Q ++ ++LF M ++PD+F ++L CA AL G IH
Sbjct: 380 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 439
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I ++R+ +D+ V ALI+MY+KCG++EKA ++ L E+ SW +II G ++ + +A
Sbjct: 440 IIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 499
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
+ FS+M+ G PD+ T+ +L C++ V+ G++ + + ++Q L+D
Sbjct: 500 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK-KELQSDAYISSTLVD 558
Query: 467 LLGRAGLLDEAEELIRKIPNEN 488
+ + G + + + + K PN +
Sbjct: 559 MYSKCGNMQDFQLIFEKAPNRD 580
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 131/535 (24%), Positives = 231/535 (43%), Gaps = 75/535 (14%)
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+ +F+ + G++ H ++ T + +V N ++ MY + K+FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMP-------------DEGTVVS 195
P +D VSWN + G+ A +F M GC ++ D T
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 196 TLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC----LSEARELFDEM 250
L +C++L++ G +IH + + + G+ALLDMY KC L ELF EM
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 251 P------------------NKNVICWTSMVSGYVNCGQLEK-ARDLFDRSPVRDIVLWTA 291
+V+ T+ + Y+ C L + LF+ P ++ + A
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+I GY + ++ EA+ +FR +Q L D+ L CA + +G +HG ++
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ VA A+++MY KCG + +A +F E+ +DA SW +II NG K L LF
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG--CLIDLLG 469
M+ G +PD+ T+ VL AC+ ++ G N + + + L+ + LID+
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHN---RIIKSRMGLDSFVGIALIDMYS 460
Query: 470 RAGLLDEAEELIRKIPNEN----NEIIVPL---------------------------YGA 498
+ G++++AE+L ++ + N II Y
Sbjct: 461 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 520
Query: 499 LLSACRIYGNVDMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQK 552
+L C V++G+++ A + K E D+ + L ++Y+ +D + +K
Sbjct: 521 ILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 575
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 145/292 (49%), Gaps = 9/292 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + AEK+ + ++++N +I F+ + ++ FSK+ E GV PDNFTY +
Sbjct: 463 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 522
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
L V+ G+++H ++K L+ D Y+ ++++DMY G + + + +F++ P++D V
Sbjct: 523 DTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 582
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN + G+ + E+A+ +F M Q N+ P+ T ++ L AC + +E G
Sbjct: 583 TWNAMVCGYAQHGLGEEALKIFEYM-QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHS 641
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE 272
+ P + + ++D+ + G +S+A EL + MP + + W +++S G +E
Sbjct: 642 MLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVE 701
Query: 273 ----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
A + P D + + N Y ++E L + M+ LK +
Sbjct: 702 VAEKAAYSILQLEP-EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKE 752
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 328/598 (54%), Gaps = 45/598 (7%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I A + + N N L+ + G + A IF ++ +++N ++ F +
Sbjct: 340 IHATVLKSSYYINVFVANALIAM--YARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQN 397
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G + ++L + ++R+ G PD + A G G ++H Y +K GL+ D V
Sbjct: 398 GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVG 457
Query: 127 NSIMDMYGVLGKICNVKKL---FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-Q 182
NS++DMY K C++K + FD+MPDKDVVSW I+GH + A+++FR ++ +
Sbjct: 458 NSLVDMYA---KFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLE 514
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
G +L D + S L AC+ LK + KEIH YI ++ ++ N ++D+Y +CG
Sbjct: 515 GIDL--DVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECG---- 568
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
++ A +F+ +D+V WT+MI+ YV
Sbjct: 569 ---------------------------NVDYAARMFELIEFKDVVSWTSMISCYVHNGLA 601
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+EA+ LF M+ ++PD LV++L+ A L AL++GK IHG++ ++ +A+ L
Sbjct: 602 NEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTL 661
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++MYA+CG +EK+ +F +R KD WTS+I M+G A++LF +M PD
Sbjct: 662 VDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDH 721
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
I F+ VL ACSH GL++EGRRF +M YQ++P EHY CL+DLLGRA L+EA + ++
Sbjct: 722 IAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVK 781
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+ E ++ ALL AC+I+ N ++GE A L +++ ++ + L++N+YA+ R
Sbjct: 782 GMEVEPT---AEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERR 838
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W+DV VR +MK G++K PGCS IE+ +H F+ D SH + EIYS L ++ + L
Sbjct: 839 WKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKL 896
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 257/562 (45%), Gaps = 79/562 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+++ +Q+ A + N L+ +VF + G L+ AEK+F + + +N +I
Sbjct: 130 LSEGQQVHAHMITSNALFNSVFLSTRLVF-MYGKCGCLVDAEKLFDGMPHKTIFTWNAMI 188
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A+ G SL L+ ++R G+ D T+P + KA G L + + G +VHG +K G
Sbjct: 189 GAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYV 248
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVKCMRFEDAVDVFRR 179
+V NSI+ MY + ++LFD MP+K DVVSWN IS + + +A+ +F
Sbjct: 249 SIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGE 308
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCG 238
M Q +L P+ T V+ L AC ++ G IH + + + + + NAL+ MY + G
Sbjct: 309 M-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFG 367
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ EA +F M + + I W SM+SG+V G
Sbjct: 368 KMGEAANIFYNMDDWDTISWNSMLSGFVQNG----------------------------- 398
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ EA+ + EM+ KPD +++++ A+ G G IH Y +N + D V
Sbjct: 399 --LYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQV 456
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+L++MYAK ++ IF ++ +KD SWT+II G A NG ++ALELF ++ G
Sbjct: 457 GNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGI 516
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV--YQIQPKLEHYGCLIDLLGRAGLLDE 476
D + +L ACS G + +++ E+ Y I+ L DL+ + G++D
Sbjct: 517 DLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKGLS------DLVLQNGIVD- 562
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
+YG GNVD A + E IE KD T + +
Sbjct: 563 ------------------VYGEC-------GNVDYA---ARMFELIEFKDVVSWTSMISC 594
Query: 537 YASANRWEDVTNVRQKMKEMGV 558
Y + + MKE GV
Sbjct: 595 YVHNGLANEALELFHLMKETGV 616
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 300/501 (59%), Gaps = 11/501 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD--VVSWNVSISGHV 165
+++H VV L + + S++ Y N + LFD P + WNV I +
Sbjct: 91 QQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLWNVMIRTYS 150
Query: 166 KCMRFEDAVDVFRRMRQ---GCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELE 221
K ++ + +F RM ++PDE T +++C+ +L G+ +H + E
Sbjct: 151 KIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFE 210
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+GN++++M + +AR++F++M ++V WTS++ GY G++++A +LF+
Sbjct: 211 SNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMM 270
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLGALEQG 340
PVR+ V W MI+G++ R+ EA+ F M R+ P++ +LV +L+ CA LGAL+QG
Sbjct: 271 PVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQG 330
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
WIH YI++ I + ++TALI+MYAKCG I+ A +F + ++D S+TS+I GL+ +
Sbjct: 331 NWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYH 390
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G AL +F QM+ P++IT +GVL+ CSH GLV+EG M ++ I PK+EH
Sbjct: 391 GLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGIAPKIEH 450
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC IDLLGRAG L+ A E+++ +P E + +I + ALLSA RI+ NV++GE++ + +
Sbjct: 451 YGCYIDLLGRAGYLERALEVVKTMPMEPDIVI---WRALLSASRIHHNVNLGEQIISHIG 507
Query: 521 KIESKD-SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+++S D + LL+N+YAS RWE VT +R+ M + PGCS IE+NG++HEF V
Sbjct: 508 QLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEFRVA 567
Query: 580 DPSHSEMKEIYSMLDRMAKTL 600
D H ++ EI + L+ + K L
Sbjct: 568 DQLHPQIVEIRNKLNEILKRL 588
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 216/482 (44%), Gaps = 98/482 (20%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFC-----THPSHGNLLYAEKIFGSIQSPC--L 53
++ L+QI AQ+ L N +L ++ C HP+ A +F SP +
Sbjct: 87 LSPLQQIHAQVVTQALSSN-ASLTASLIHCYLCAKNHPN------ARILFDHYPSPSPPI 139
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLR----ERGVSPDNFTYPFVFKAVGWLGEVKKGEK 109
+N++I+ ++K + ++ + LF ++ V PD +T+ FV + + GE
Sbjct: 140 KLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEI 199
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV--------------- 154
VHG VVK+G E + YV NS+++M V ++ + +K+F++M ++DV
Sbjct: 200 VHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGE 259
Query: 155 ----------------VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLS 198
VSW V ISG + C R+ +A+ F M + P+E +V LS
Sbjct: 260 MDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLS 319
Query: 199 ACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC L L+ G IH YI++ + + + AL+DMY KCG + A +F+ + ++V+
Sbjct: 320 ACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLS 379
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
+TSM+SG G + A +F + DE V
Sbjct: 380 FTSMISGLSYHGLGKDALRVF--------------------YQMLDENVM---------- 409
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKA 375
P++ ++ +L GC+ G +E+G I + E+ + + I++ + G +E+A
Sbjct: 410 -PNEITILGVLNGCSHSGLVEEGSSILANM-ESLWGIAPKIEHYGCYIDLLGRAGYLERA 467
Query: 376 LEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
LE+ + E D W +++ +I+ + L Q+IS IG L + H
Sbjct: 468 LEVVKTMPMEPDIVIWRALLSA----SRIHHNVNLGEQIIS---------HIGQLKSSDH 514
Query: 435 GG 436
G
Sbjct: 515 NG 516
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/469 (37%), Positives = 282/469 (60%), Gaps = 7/469 (1%)
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGH-VKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
L + KLFD++P D+ +N I H + + D++ VFR + + P+ + V
Sbjct: 223 LASLTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFV 282
Query: 195 STLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
AC + G+++ + + L+ + NAL+ M+ K G + +AR +FD ++
Sbjct: 283 FAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDR 342
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+ W +M+ YV G + A++LFD RD+V W+ +I GYVQ F EA+ F +M
Sbjct: 343 DFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKML 402
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+KP+++ +V+ L C+ L AL+QGKWIH YI + I ++ + +LI+MYAKCG I+
Sbjct: 403 QSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEID 462
Query: 374 KALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
A +F+E + ++ W ++I G AM+GK +A+ +F +M P+ +TFI +L+AC
Sbjct: 463 SASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNAC 522
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SHG +V EG+ +F M Y I P++EHYGC++DLL R+G L ++EE+I +P +
Sbjct: 523 SHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPD--- 579
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
V ++GALL+ACRIY +++ G ++ ++++I+ + LL NIY+++ RW + VR+K
Sbjct: 580 VAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREK 639
Query: 553 MKEMGVR-KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+ R K+PG SSIE+NG+ HEFLVGD SH + +EIYS LD M L
Sbjct: 640 NEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKL 688
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 178/376 (47%), Gaps = 70/376 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+KQ A + P NK F + + +L YA K+F I P L YN +I
Sbjct: 192 INQIKQTHANLITTAQITLPVIANK---FLKNVALASLTYAHKLFDQIPQPDLFIYNTMI 248
Query: 61 KAFA-KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
K+ + S+ S+ +F L R+ G P+ +++ F F A G V++GE+V + VK G
Sbjct: 249 KSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVG 308
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS------------------ 160
L+ + +V N+++ M+G G++ + + +FD D+D SWN
Sbjct: 309 LDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFD 368
Query: 161 -------------ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
I+G+V+ F +A+D F +M Q + P+E T+VS L+AC+ L L+
Sbjct: 369 EMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQS-EVKPNEYTMVSALAACSNLVALD 427
Query: 208 LGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGY 265
GK IH YI ++ ++ + +L+DMY KCG + A +F E + V W +M+ G+
Sbjct: 428 QGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGF 487
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G+ E EA+ +F +M++ ++ P+K +
Sbjct: 488 AMHGKPE-------------------------------EAINVFEKMKVEKVSPNKVTFI 516
Query: 326 ALLTGCAQLGALEQGK 341
ALL C+ +++GK
Sbjct: 517 ALLNACSHGYMVKEGK 532
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 46/195 (23%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N +I FA G +++ +F K++ VSP+ T+ + A HGY+V
Sbjct: 480 WNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACS-----------HGYMV 528
Query: 116 KTGLEF-----DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
K G + Y N ++ YG C V L S SGH+K
Sbjct: 529 KEGKSYFELMASDYGINPEIEHYG-----CMVDLL--------------SRSGHLK---- 565
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNAL 230
D+ ++ M + PD + L+AC K++E G I R I +E++ I N L
Sbjct: 566 -DSEEMILSM----PMAPDVAIWGALLNACRIYKDMERGYRIGRII-KEIDPNHIGCNVL 619
Query: 231 L-DMYCKCGCLSEAR 244
L ++Y G +EAR
Sbjct: 620 LGNIYSTSGRWNEAR 634
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 323/650 (49%), Gaps = 83/650 (12%)
Query: 26 LMVFCTHPSH-----GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR 80
LMV H +H A +F + + ++ ++I + G F F ++
Sbjct: 100 LMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML 159
Query: 81 ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKIC 140
G+ PD F Y + ++ L ++ G+ VH +V G +V S+++MY LG I
Sbjct: 160 NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE 219
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
+ +F+ M + + VSWN ISG +A D+F RM+ G P+ T+VS A
Sbjct: 220 DSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGA-CTPNMYTLVSVSKAV 278
Query: 201 TALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC---------------------- 237
L ++ +GKE+ ++ +E ++G AL+DMY KC
Sbjct: 279 GKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTP 338
Query: 238 -----------GCLSEARELFDEMPNK-------------NVICWT-------------- 259
GC EA EL+ +M N I +
Sbjct: 339 WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 398
Query: 260 -------------SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
++ Y CG LE R +FDR RDIV WT ++ Y Q + +EA+
Sbjct: 399 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 458
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
A F M+ P++F ++L CA L LE G+ +HG + + + + + +ALI+MY
Sbjct: 459 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 518
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKCG I +A ++F ++ D SWT+II G A +G + AL+LF +M G K + +T +
Sbjct: 519 AKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLL 578
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
VL ACSHGG+V+EG +F M + Y + P++EHY C+IDLLGR G LD+A E IRK+P
Sbjct: 579 CVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPM 638
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
E NE++ + LL CR++GNV++GE A + I + S+ + LL+N Y +ED
Sbjct: 639 EPNEMV---WQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDG 695
Query: 547 TNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
++R MK+ GV+K PG S I + G +H+F GD H + KEIY L+ +
Sbjct: 696 LSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEEL 745
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVD--AVVATALIEMYAKCGLIEKALEIFYE 381
L+ +L CA+ G++ + K +HG + ++ V+ +Y+KC A +F E
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+ +++ SWT +I G +G + F +M++ G PD + ++ +C
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC 177
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/613 (34%), Positives = 323/613 (52%), Gaps = 46/613 (7%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F +++ T N ++ + ++G L A +F +I P +YN L+ A A S
Sbjct: 59 RLFAAMPRRSTSTYNAML--AGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSL 116
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFK----------------------AVGWLG----E 103
+ LF ++ R D+ TY + AV W G
Sbjct: 117 ADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAY 172
Query: 104 VKKG--EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
V+ G E+ G + + E+D N++M Y GK+ ++LFD MP +DVVSWN+ +
Sbjct: 173 VRNGRVEEARG-LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMV 231
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
SG+ R D V+ RR+ + D T + +S LE E R + E
Sbjct: 232 SGYA---RRGDMVEA-RRLFDAAPVR-DVFTWTAVVSGYAQNGMLE---EARRVFDAMPE 283
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ NA++ Y + + EA+ELF+ MP +NV W +M++GY G LE+A+ +FD
Sbjct: 284 RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P +D V W AM+ Y Q +E + LF EM ++ +L+ CA + ALE G
Sbjct: 344 PQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGM 403
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+HG + V V AL+ MY KCG +E A F E+ E+D SW ++I G A +G
Sbjct: 404 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 463
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ALE+F M + KPDDIT +GVL+ACSH GLV++G +F +M + + K EHY
Sbjct: 464 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY 523
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C+IDLLGRAG L EA +L++ +P E + ++GALL A RI+ N ++G A + +
Sbjct: 524 TCMIDLLGRAGRLAEAHDLMKDMPFEPDST---MWGALLGASRIHRNPELGRSAAEKIFE 580
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+E +++ + LL+NIYAS+ +W D +R M+E GV+KVPG S IE+ +H F GD
Sbjct: 581 LEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDC 640
Query: 582 SHSEMKEIYSMLD 594
H E ++IY+ L+
Sbjct: 641 VHPEKEKIYAFLE 653
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 39/355 (10%)
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
LE + N + + G++ + ++LF MP + ++N ++G+ R A +FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 179 RMRQGCNLMPDEGTVVSTLSACTAL-------------------------KNLELGKEIH 213
+ + N T++ L+ ++L N L
Sbjct: 94 AIPRPDNY--SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLAR 151
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
Y + E + N +L Y + G + EAR LF+ +VI W +++SGYV G++ +
Sbjct: 152 HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSE 211
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
AR+LFDR P RD+V W M++GY + EA LF + D F A+++G AQ
Sbjct: 212 ARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPV----RDVFTWTAVVSGYAQ 267
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
G LE+ + + + E +AV A++ Y + ++++A E+F + ++ ASW ++
Sbjct: 268 NGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+ G A G + +A +F M + D +++ +L+A S GG +E + F M
Sbjct: 324 LTGYAQAGMLEEAKAVFDTM----PQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 148/349 (42%), Gaps = 60/349 (17%)
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE------- 272
LE I N + + + G +++A LF MP ++ + +M++GY G+L
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 273 ------------------------KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
AR LFD PVRD V + MI+ + V+L
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHG----LVSL 149
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
R + + D +L + G +E+ + G N +R D + AL+ Y +
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR---GLFN-SRTEWDVISWNALMSGYVQ 205
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP--DDITFI 426
G + +A E+F + +D SW ++ G A G + +A LF A P D T+
Sbjct: 206 WGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD------AAPVRDVFTWT 259
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
V+S + G+++E RR F+ M E + + ++ + ++DEA+EL +P
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS-SFHTLLA 534
N V + +L+ Y M E+ A+ + + KD+ S+ +LA
Sbjct: 315 RN----VASWNTMLTG---YAQAGMLEEAKAVFDTMPQKDAVSWAAMLA 356
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/641 (33%), Positives = 337/641 (52%), Gaps = 100/641 (15%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKS------LLLFSKLRERGVSPDNF 89
G++ + F I + A+N +I A+ G F ++ LLL S++R PD +
Sbjct: 165 GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIR-----PDFY 219
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+P V KA G L + G K+H + K G +++ +V S++ MY G + LFD+M
Sbjct: 220 TFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 276
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
P +D+ SWN ISG ++ A+DV MR +G + + TVVS L C L ++
Sbjct: 277 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM--NFVTVVSILPVCPQLGDIST 334
Query: 209 GKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY-- 265
IH Y I LEF + NAL++MY K G L +AR+ F +M +V+ W S+++ Y
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ 394
Query: 266 ---------------VNCGQ------------LEKARDLFDRSPVR-----------DIV 287
+N Q + ++RD + V D+V
Sbjct: 395 NDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV 454
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLK----------------------------- 318
+ A+++ Y + D A +F +II +K
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVF---EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME 511
Query: 319 ------PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
P++ V++L A +GAL+QG IHG + + + +D VAT LI++Y KCG +
Sbjct: 512 ECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 571
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
A+ +FY++ ++ + +W +II ++G K L+LF +M+ G KPD +TF+ +LSAC
Sbjct: 572 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 631
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SH G V+EG+ F M E Y I+P L+HYGC++DLLGRAG L+ A + I+ +P + + I
Sbjct: 632 SHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASI 690
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+GALL ACRI+GN+++G+ + L +++SK+ ++ LL+NIYA+ +WE V VR
Sbjct: 691 ---WGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+E G++K PG S+IE+N + F G+ SH + KEIY L
Sbjct: 748 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEEL 788
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/587 (24%), Positives = 254/587 (43%), Gaps = 98/587 (16%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER-------- 82
THP NL A + I +P L + K + R+ + LFS R
Sbjct: 58 THPFSTNLTLASARWRHILAPTLKS-RYTSKFLPPR---RRPIQLFSAARSSPQFSSYGL 113
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV 142
G + + F+F + + + +H +V G ++ ++++Y LG +
Sbjct: 114 GNQNEEIDFNFLFDSST---KTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLS 170
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
+ FD++P KDV +WN IS +V F +A+ F ++ + PD T L AC
Sbjct: 171 RCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT 230
Query: 203 LKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L + G++IH + ++ + +L+ MY + G AR LFD+MP +++ W +M
Sbjct: 231 LVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAM 287
Query: 262 VSGYVNCGQLEKARDLFDRS----------------PV---------------------- 283
+SG + G +A D+ D PV
Sbjct: 288 ISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL 347
Query: 284 -RDIVLWTAMINGYVQFNRFDEAVALFRE------------------------------- 311
D+ + A+IN Y +F ++A F++
Sbjct: 348 EFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVK 407
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCG 370
MQ+ +PD LV+L + AQ + + +HG+I + D V+ A+++MYAK G
Sbjct: 408 MQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLG 467
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVL 429
L++ A ++F + KD SW ++I G A NG ++A+E++ M P+ T++ +L
Sbjct: 468 LLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 527
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
A +H G + +G + + + + + CLID+ G+ G L +A L ++P E++
Sbjct: 528 PAYAHVGALQQGMKIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 586
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAA--LLEKIESKDSSFHTLLA 534
+ A++S I+G+ + KL L E ++ +F +LL+
Sbjct: 587 VT----WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLS 629
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 204/589 (34%), Positives = 326/589 (55%), Gaps = 26/589 (4%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIF----------GSIQSPCLL 54
++ A++ GL +NP ++++ L +A +F G + P L
Sbjct: 10 KMHARLITTGLIKNPNLTTRIVLAFVASRRSYLAEFARCVFYEYYLCSFSAGEGEDPYL- 68
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
+N +IK+++ R++LLLF + E GV D F+ V KA L +K+G ++HG++
Sbjct: 69 -WNAVIKSYSHGIDPRRALLLFCLMIENGVCVDKFSLSLVLKACSRLEFLKEGMQIHGFL 127
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
KTG+ D ++ N ++ +Y G + +++FD MP +D VS+N I G+VKC + A
Sbjct: 128 RKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKSAH 187
Query: 175 DVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EFTPIMGNALLD 232
+F +LMP E ++S S + G + E+ E I N++++
Sbjct: 188 KLF-------DLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDLISWNSMIN 240
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
K G + +A+ LFD MP ++V+ W +M+ GY G + A+ LFD+ RD+V +M
Sbjct: 241 GCVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNSM 300
Query: 293 INGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+ GYVQ EA+ +F +M+ L PD+ LV +L+ AQLG L + +H YI E R
Sbjct: 301 MAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEKR 360
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + ALI+M++KCG I+ A+ +F + K W ++I GLA++G A ++
Sbjct: 361 FPLGGKLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHGLGELAFDMLM 420
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
Q+ +PD ITFIGVL+ACSH GLV EG F M + I+P+L+HYGCL+D+L R+
Sbjct: 421 QIERCSIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHYGCLVDVLSRS 480
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G ++ A+ LI +P E N++I + + LSAC + + GE +A L + S +
Sbjct: 481 GSIELAKHLIEDMPMEPNDVI---WRSFLSACSTHEEFETGELVAKHLILQAGYNPSSYV 537
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
LL+N+YAS W+DV VR MK+ + K+PGCS IE++G +HEF V D
Sbjct: 538 LLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFFVQD 586
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 313/582 (53%), Gaps = 47/582 (8%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGE--VKKGEKVH 111
+N +I AFA+ ++ +F L + + PD++++ + AVG + + V ++H
Sbjct: 125 HNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLH 184
Query: 112 GYVVKTGLEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSW----------- 157
V K G V N+++ +Y G + +K+ DEMP+KD ++W
Sbjct: 185 CAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKG 244
Query: 158 --------------------NVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
N ISG+V+ +A ++FRRM + PDE T S L
Sbjct: 245 DVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSK-RIPPDEFTFTSLL 303
Query: 198 SACTALKNLELGKEIH-RYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPN 252
SAC GK +H ++I + +F P + NAL+ +Y K G ++ A ++FD M
Sbjct: 304 SACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTL 363
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+V+ W +++SGY+ G L+ A +F P + + W M++GYV ++A+ LF +M
Sbjct: 364 KDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQM 423
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ +KP + + C +LGAL+ GK +H ++ + AL+ MYA+CG +
Sbjct: 424 RSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAV 483
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+ A +F + D+ SW ++I L +G +ALELF QM++ G PD I+F+ +L+AC
Sbjct: 484 KDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTAC 543
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
+H GLVD+G ++F +M + I P +HY LIDLLGRAG + EA +LI+ +P E I
Sbjct: 544 NHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAI 603
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+ A+LS CRI G++++G A L K+ + + LL+N Y++A RW D VR+
Sbjct: 604 ---WEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKL 660
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
M++ GV+K PGCS IE+ +H FLVGD H + E+Y L+
Sbjct: 661 MRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLE 702
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 185/372 (49%), Gaps = 28/372 (7%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
S++ Y V G++ + FD +P +D V N IS + AV VFR +
Sbjct: 93 TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152
Query: 185 N-LMPDEGTVVSTLSACTALKNLELGK--EIHRYINQELEFTPIMG--NALLDMYCKC-- 237
+ L PD+ + S LSA + +L + ++H +++ L ++ NAL+ +Y KC
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHK-LGAGAVLSVSNALIALYMKCDA 211
Query: 238 -GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
G +AR++ DEMP K+ + WT++V G+V G + AR F+ V+W AMI+GY
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG--------YIN 348
VQ EA LFR M R+ PD+F +LL+ CA G GK +HG ++
Sbjct: 272 VQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVP 331
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
E + V+ AL+ +Y+K G I A +IF + KD SW +I+ G +G ++ A
Sbjct: 332 EAALPVN----NALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAAR 387
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
+F +M +++++ ++S HGGL ++ + FN M ++P Y +
Sbjct: 388 IFKEM----PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRS-EDVKPCDYTYAGAVAAC 442
Query: 469 GRAGLLDEAEEL 480
G G L ++L
Sbjct: 443 GELGALKHGKQL 454
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 182/428 (42%), Gaps = 72/428 (16%)
Query: 16 LQQNPET--LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSL 73
L + PE L + H G++ A F I + +N +I + + G ++
Sbjct: 222 LDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAF 281
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF----DTYVCNSI 129
LF ++ + + PD FT+ + A G G+ VHG ++ +F V N++
Sbjct: 282 ELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNAL 341
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWN------------------------------- 158
+ +Y GKI K+FD M KDVVSWN
Sbjct: 342 VTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWM 401
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
V +SG+V EDA+ +F +MR ++ P + T ++AC L L+ GK++H ++ Q
Sbjct: 402 VMVSGYVHGGLAEDALKLFNQMRSE-DVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQ 460
Query: 219 -ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
E + GNALL MY +CG + +AR +F MPN + + W +M+S GQ R
Sbjct: 461 CGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISAL---GQHGHGR-- 515
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
EA+ LF +M + PD+ + +LT C G +
Sbjct: 516 --------------------------EALELFDQMVAQGIYPDRISFLTILTACNHAGLV 549
Query: 338 EQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIIC 395
+ G ++ + I+ LI++ + G I +A ++ + E A W +I+
Sbjct: 550 DDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILS 609
Query: 396 GLAMNGKI 403
G +NG +
Sbjct: 610 GCRINGDM 617
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 158/338 (46%), Gaps = 22/338 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +IF + L++ +++ + G +L LF+++R V P ++TY
Sbjct: 380 GCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAV 439
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A G LG +K G+++H ++V+ G E N+++ MY G + + + +F MP+ D V
Sbjct: 440 AACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSV 499
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
SWN IS + +A+++F +M QG + PD + ++ L+AC ++ G +
Sbjct: 500 SWNAMISALGQHGHGREALELFDQMVAQG--IYPDRISFLTILTACNHAGLVDDGFQYFE 557
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+ ++ +P + L+D+ + G + EAR+L MP W +++SG G +
Sbjct: 558 SMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDM 617
Query: 272 E----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
E A LF P D + + N Y R+ +A + + M+ +K +
Sbjct: 618 ELGAYAADQLFKMVPEHDGT-YILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP------ 670
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
GC+ +E G +H ++ + DA +EM
Sbjct: 671 --GCSW---IEVGNKVHVFLVGDTKHPDAHEVYRFLEM 703
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 45/273 (16%)
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
P + LL +Y L+ LF P + TS+VS Y G+L + FD PV
Sbjct: 60 PHLTLRLLHLYTLSPDLATPAVLFRADPGP--VAATSLVSAYAVAGRLRDSAAFFDSVPV 117
Query: 284 --RDIVLWTAMINGYVQFNRFDEAVALFREMQII--RLKPDKFILVALLTGCAQLGALEQ 339
RD VL AMI+ + + + AV++FR + L+PD + +LL+ Q+ L
Sbjct: 118 ARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAV 177
Query: 340 GKWIHGYINENRITVDAV--VATALIEMYAKC---GLIEKALEIFYELREKDAASWTSII 394
+ +++ AV V+ ALI +Y KC G+ A ++ E+ EKD +WT+I+
Sbjct: 178 SHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIV 237
Query: 395 CGLAMNGKIN-------------------------------KALELFSQMISGGAKPDDI 423
G G ++ +A ELF +M+S PD+
Sbjct: 238 VGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEF 297
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
TF +LSAC++ G G+ + + ++QP
Sbjct: 298 TFTSLLSACANAGFFLHGK---SVHGQFIRLQP 327
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/560 (35%), Positives = 313/560 (55%), Gaps = 36/560 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F I S ++++ +I ++A+ F ++L FS++R G P+NFT+ V
Sbjct: 95 GCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVL 154
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA L G+ VH V+KT E D YV ++++Y G + + F +MP DV+
Sbjct: 155 KACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVI 214
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
W+ IS + + E A+++F +MR+ ++P++ T S L A +++L+L K IH +
Sbjct: 215 PWSFMISRFAQSGQSEKALEIFCQMRRAF-VIPNQFTFSSVLQASADIESLDLSKTIHGH 273
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ L + NAL+ Y KCGC +E++
Sbjct: 274 ALKAGLSTDVFVSNALMACYAKCGC-------------------------------IEQS 302
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+LF+ R+ V W +I YVQ + A++LF M +++ + ++L CA L
Sbjct: 303 MELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATL 362
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
ALE G +H + D V ALI+MYAKCG I+ A +F L +D SW +II
Sbjct: 363 AALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAII 422
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
CG +M+G +A+++F+ M KPD++TF+GVLSACS+ G +DEG+++F +M + Y I
Sbjct: 423 CGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGI 482
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
+P +EHY C++ L+GR+G LD+A + I IP E + V ++ ALL AC I+ +V++G
Sbjct: 483 EPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPS---VMIWRALLGACVIHNDVELGRI 539
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
A + ++E +D + H LL+NIYA A RW +V VR+ MK GV+K PG S IE G +H
Sbjct: 540 SAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVH 599
Query: 575 EFLVGDPSHSEMKEIYSMLD 594
F V D SH+++K I ML+
Sbjct: 600 CFTVADTSHADLKLINGMLE 619
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 194/391 (49%), Gaps = 33/391 (8%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F + +++ LI +A+ F ++ LF++L G + F + V K + +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+ G VHG V+K G +T++ +++D Y V G + +++FDE+ KD+VSW I+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
+ + F +A++ F +MR P+ T L AC L+N + GK +H + E
Sbjct: 122 YAENDCFSEALEFFSQMRVA-GFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+G LL++Y +CG +A F +MP +VI W+ M+S + GQ EK
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEK--------- 231
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
A+ +F +M+ + P++F ++L A + +L+ K
Sbjct: 232 ----------------------ALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKT 269
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IHG+ + ++ D V+ AL+ YAKCG IE+++E+F L +++ SW +II G
Sbjct: 270 IHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD 329
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACS 433
+AL LFS M+ + ++T+ +L AC+
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACA 360
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 184/435 (42%), Gaps = 68/435 (15%)
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTAL 203
+FDEMP+++ VS+ I G+ + +F +A ++F R+ +G L P T V L ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTV--LKLLVSM 59
Query: 204 KNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
+ ELG+ +H + + +G AL+D Y GC+S
Sbjct: 60 EWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVS--------------------- 98
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
AR++FD +D+V WT MI Y + + F EA+ F +M++ KP+ F
Sbjct: 99 ----------MAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNF 148
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+L C L + GK +H + + D V L+E+Y +CG + A F ++
Sbjct: 149 TFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDM 208
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
+ D W+ +I A +G+ KALE+F QM P+ TF VL A + +D +
Sbjct: 209 PKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSK 268
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPL--- 495
+ + + L+ + G ++++ EL + + N N IIV
Sbjct: 269 TIHGHALKA-GLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQL 327
Query: 496 ------------------------YGALLSACRIYGNVDMGEKLAALLEK-IESKDSSFH 530
Y ++L AC +++G ++ L K I +D +
Sbjct: 328 GDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVG 387
Query: 531 TLLANIYASANRWED 545
L ++YA +D
Sbjct: 388 NALIDMYAKCGSIKD 402
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 312/571 (54%), Gaps = 58/571 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L+ A +F + ++++ ++ + + +F ++L L +++ GV +
Sbjct: 137 GCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLI 196
Query: 96 KAVGWLGEVKKGEKVHGYVVKT-GLE-FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD 153
G L ++K G VHGY+V+ G E + + +++DMY G + + ++LFD + +
Sbjct: 197 AVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRS 256
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
VVSW V I+G ++ R ++ F RM + L P+E T++S ++ C + L+LGK H
Sbjct: 257 VVSWTVMIAGCIRSCRLDEGAKNFNRMLEE-KLFPNEITLLSLITECGFVGTLDLGKWFH 315
Query: 214 RYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
Y+ + + AL+DMY KC GQ+
Sbjct: 316 AYLLRNGFGMSLALVTALIDMYGKC-------------------------------GQVG 344
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
AR LF+ +D+ +W+ +I+ Y + D+ LF EM +KP+ +V+LL+ CA
Sbjct: 345 YARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCA 404
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
+ GAL+ GKW H YIN + + VD ++ TALI MYAKCG + A +F E ++D W +
Sbjct: 405 EAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNT 464
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
++ G +M+G +ALELFS+M S G +P+DITF+ + ACSH GL
Sbjct: 465 MMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL--------------- 509
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
+EHYGCL+DLLGRAG LDEA +I +P N II +GALL+AC+++ N+ +G
Sbjct: 510 -----MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTII---WGALLAACKLHKNLALG 561
Query: 513 EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGI 572
E A + +++ ++ + L +NIYASA RW DVT+VR+ M G++K PG S IE++G
Sbjct: 562 EVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGS 621
Query: 573 IHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+H F GD + ++ ++Y M+ M L +S
Sbjct: 622 VHHFKSGDKACTQTTKVYEMVTEMCIKLRES 652
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 235/480 (48%), Gaps = 58/480 (12%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSP-DNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
YNLLI ++ + S + +R + DNF P + KA G ++HG+
Sbjct: 55 YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
K G D +VCN++M+MY G + + + +FD+MP++DVVSW + +V+ F +A+
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEAL 174
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-----NQELEFTPIMGNA 229
+ R M Q + ++S ++ L +++ G+ +H YI ++++E + M A
Sbjct: 175 RLVREM-QFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVS--MTTA 231
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
L+DMYCK GCL+ A+ LFDR R +V W
Sbjct: 232 LIDMYCKGGCLASAQR-------------------------------LFDRLSKRSVVSW 260
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
T MI G ++ R DE F M +L P++ L++L+T C +G L+ GKW H Y+
Sbjct: 261 TVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLR 320
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
N + + TALI+MY KCG + A +F +++KD W+ +I A +++ L
Sbjct: 321 NGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNL 380
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
F +M++ KP+++T + +LS C+ G +D G+ T Y + +G +D++
Sbjct: 381 FVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK-----WTHAY-----INRHGLEVDVIL 430
Query: 470 RAGLLDEAEE-----LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
L++ + + R + NE + + ++ +++ ++G G++ L ++ES
Sbjct: 431 ETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHG---CGKEALELFSEMES 487
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 194/456 (42%), Gaps = 70/456 (15%)
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
N F + ++N+ IS + + + + + MR D + S L AC
Sbjct: 39 NPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKAC 98
Query: 201 TALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
+ +LG+E+H + + + NAL++MY KCGCL AR +FD+MP ++V+ WT
Sbjct: 99 AQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWT 158
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
+M+ YV RS F EA+ L REMQ + +K
Sbjct: 159 TMLGCYV-------------RSKA------------------FGEALRLVREMQFVGVKL 187
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYI--NENRITVDAVVATALIEMYAKCGLIEKALE 377
L++L+ L ++ G+ +HGYI N ++ + TALI+MY K G + A
Sbjct: 188 SGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQR 247
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F L ++ SWT +I G + ++++ + F++M+ P++IT + +++ C G
Sbjct: 248 LFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGT 307
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
+D G ++F+ L LID+ G+ G + A L + ++ +I L
Sbjct: 308 LDLG-KWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLIS 366
Query: 498 A-------------------------------LLSACRIYGNVDMGEKLAALLEKIESK- 525
A LLS C G +D+G+ A + + +
Sbjct: 367 AYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEV 426
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
D T L N+YA DVT R E R +
Sbjct: 427 DVILETALINMYAKCG---DVTIARSLFNEAMQRDI 459
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 298/506 (58%), Gaps = 12/506 (2%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI---CNVKKLFDEMPDKDVVSWNV 159
+ + ++VH + L+ +YV ++ + L + + LF ++ + +W
Sbjct: 20 SLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWTA 79
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
I + A+ + MR+ + P T + SAC A+++ LG ++H
Sbjct: 80 LIRAYALRGPLSQALSFYSSMRKR-RVSPISFTFSALFSACAAVRHSALGAQLHAQTLLL 138
Query: 220 LEFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
F+ + NA++DMY KCG L AR +FDEMP ++VI WT ++ Y G + ARDL
Sbjct: 139 GGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDL 198
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FD PV+D+V WTAM+ GY Q +A+ +FR ++ ++ D+ LV +++ CAQLGA
Sbjct: 199 FDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGAS 258
Query: 338 EQGKWIHGYINENRITV--DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
+ WI + V + +V +ALI+MY+KCG +E+A ++F +RE++ S++S+I
Sbjct: 259 KYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIV 318
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A++G+ A++LF M+ G KP+ +TF+GVL+ACSH GLVD+G++ F +M + Y +
Sbjct: 319 GFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVA 378
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P E Y C+ DLL RAG L++A +L+ +P E++ + +GALL A ++GN D+ E
Sbjct: 379 PTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAV---WGALLGASHVHGNPDVAEIA 435
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI-NGIIH 574
+ L ++E + + LL+N YASA RW+DV+ VR+ ++E ++K PG S +E NG+IH
Sbjct: 436 SKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIH 495
Query: 575 EFLVGDPSHSEMKEIYSMLDRMAKTL 600
+F+ GD SH ++ EI L+ + + L
Sbjct: 496 KFVAGDVSHPKINEIKKELNDLLERL 521
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 221/463 (47%), Gaps = 76/463 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNL-LYAEKIFGSIQSPCLLAYNLL 59
+ Q K++ AQI+ LQQ+ L KL+ T H L Y +F + +P A+ L
Sbjct: 21 LNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWTAL 80
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG-YVVKTG 118
I+A+A +G ++L +S +R+R VSP +FT+ +F A + G ++H ++ G
Sbjct: 81 IRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGG 140
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS---------------------- 156
D YV N+++DMY G + + +FDEMP++DV+S
Sbjct: 141 FSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFD 200
Query: 157 ---------WNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNL 206
W ++G+ + DA++VFRR+R +G + DE T+V +SAC L
Sbjct: 201 GLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEI--DEVTLVGVISACAQLGAS 258
Query: 207 ELGKEIHRYINQELEF----TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
+ I R I + F ++G+AL+DMY KCG + EA ++F M +NV ++SM+
Sbjct: 259 KYANWI-RDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMI 317
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
G+ I+G R A+ LF +M +KP+
Sbjct: 318 VGFA--------------------------IHG-----RARAAIKLFYDMLETGVKPNHV 346
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
V +LT C+ G ++QG+ + + + + A + + ++ ++ G +EKAL++
Sbjct: 347 TFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVET 406
Query: 382 L-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ E D A W +++ ++G + A E+ S+ + +PD+I
Sbjct: 407 MPMESDGAVWGALLGASHVHGNPDVA-EIASKRLF-ELEPDNI 447
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/613 (34%), Positives = 323/613 (52%), Gaps = 46/613 (7%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F +++ T N ++ + ++G L A +F +I P +YN L+ A A S
Sbjct: 59 RLFAAMPRRSTSTYNAMLA--GYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSL 116
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFK----------------------AVGWLG----E 103
+ LF ++ R D+ TY + AV W G
Sbjct: 117 ADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAY 172
Query: 104 VKKG--EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
V+ G E+ G + + E+D N++M Y GK+ ++LFD MP +DVVSWN+ +
Sbjct: 173 VRNGRVEEARG-LFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMV 231
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
SG+ R D V+ RR+ + D T + +S LE E R + E
Sbjct: 232 SGYA---RRGDMVEA-RRLFDAAPVR-DVFTWTAVVSGYAQNGMLE---EARRVFDAMPE 283
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ NA++ Y + + EA+ELF+ MP +NV W +M++GY G LE+A+ +FD
Sbjct: 284 RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P +D V W AM+ Y Q +E + LF EM ++ +L+ CA + ALE G
Sbjct: 344 PQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGM 403
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+HG + V V AL+ MY KCG +E A F E+ E+D SW ++I G A +G
Sbjct: 404 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 463
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ALE+F M + KPDDIT +GVL+ACSH GLV++G +F +M + + K EHY
Sbjct: 464 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY 523
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C+IDLLGRAG L EA +L++ +P E + ++GALL A RI+ N ++G A + +
Sbjct: 524 TCMIDLLGRAGRLAEAHDLMKDMPFEPDST---MWGALLGASRIHRNPELGRSAAEKIFE 580
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+E +++ + LL+NIYAS+ +W D +R M+E GV+KVPG S IE+ +H F GD
Sbjct: 581 LEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDC 640
Query: 582 SHSEMKEIYSMLD 594
H E ++IY+ L+
Sbjct: 641 VHPEKEKIYAFLE 653
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 191/436 (43%), Gaps = 72/436 (16%)
Query: 20 PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL 79
PE + H G + AE++F ++ YN ++ ++ G + LF +
Sbjct: 36 PEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI 95
Query: 80 RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI 139
PDN++Y N+++ V +
Sbjct: 96 PR----PDNYSY-----------------------------------NTLLHALAVSSSL 116
Query: 140 CNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSA 199
+ + LFDEMP +D V++NV IS H A F +L P++ V
Sbjct: 117 ADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF-------DLAPEKDAVSWNGML 169
Query: 200 CTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
++N + +E N E+ I NAL+ Y + G +SEARELFD MP ++V+ W
Sbjct: 170 AAYVRNGRV-EEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN 228
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
MVSGY G + +AR LFD +PVRD+ WTA+++GY Q +EA +F M P
Sbjct: 229 IMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM------P 282
Query: 320 DKFILV--ALLTGCAQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKAL 376
++ + A++ Q +++ K + N + V + ++ YA+ G++E+A
Sbjct: 283 ERNAVSWNAMVAAYIQRRMMDEAKELF-----NMMPCRNVASWNTMLTGYAQAGMLEEAK 337
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS--- 433
+F + +KDA SW +++ + G + L+LF +M G + F VLS C+
Sbjct: 338 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIA 397
Query: 434 --------HGGLVDEG 441
HG L+ G
Sbjct: 398 ALECGMQLHGRLIRAG 413
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 165/355 (46%), Gaps = 39/355 (10%)
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
LE + N + + G++ + ++LF MP + ++N ++G+ R A +FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 179 RMRQGCNLMPDEGTVVSTLSACTAL-------------------------KNLELGKEIH 213
+ + N T++ L+ ++L N L
Sbjct: 94 AIPRPDNY--SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLAR 151
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
Y + E + N +L Y + G + EAR LF+ + I W +++SGYV G++ +
Sbjct: 152 HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSE 211
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
AR+LFDR P RD+V W M++GY + EA LF + D F A+++G AQ
Sbjct: 212 ARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPV----RDVFTWTAVVSGYAQ 267
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
G LE+ + + + E +AV A++ Y + ++++A E+F + ++ ASW ++
Sbjct: 268 NGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+ G A G + +A +F M + D +++ +L+A S GG +E + F M
Sbjct: 324 LTGYAQAGMLEEAKAVFDTM----PQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 60/349 (17%)
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE------- 272
LE I N + + + G +++A LF MP ++ + +M++GY G+L
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 273 ------------------------KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
AR LFD PVRD V + MI+ + V+L
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHG----LVSL 149
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
R + + D +L + G +E+ + G N +R DA+ AL+ Y +
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR---GLFN-SRTEWDAISWNALMSGYVQ 205
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP--DDITFI 426
G + +A E+F + +D SW ++ G A G + +A LF A P D T+
Sbjct: 206 WGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD------AAPVRDVFTWT 259
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
V+S + G+++E RR F+ M E + + ++ + ++DEA+EL +P
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS-SFHTLLA 534
N V + +L+ Y M E+ A+ + + KD+ S+ +LA
Sbjct: 315 RN----VASWNTMLTG---YAQAGMLEEAKAVFDTMPQKDAVSWAAMLA 356
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/590 (32%), Positives = 317/590 (53%), Gaps = 56/590 (9%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
+ F S+ ++++ +I + R L LF ++++ GV T+ VF++ L
Sbjct: 230 QFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLS 289
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
++ G ++HG+ +KT D + + +DMY + + +KLF+ +P+ ++ S+N I
Sbjct: 290 ALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIV 349
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
G + R +G L DE ++ AC +K G ++H + L
Sbjct: 350 G-------------YARSDKGLGL--DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQ 394
Query: 223 TPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG----------------- 264
+ I + NA+LDMY KCG L EA +F+EM +++ + W ++++
Sbjct: 395 SNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHN 454
Query: 265 --------------------YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
Y CG +EKA L DR + +V W A+I+G+ + +E
Sbjct: 455 RIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEE 514
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A F +M + + PD F +L CA L +E GK IH I + + DA +++ L++
Sbjct: 515 AQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVD 574
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY+KCG ++ IF + +D +W +++CG A +G +AL++F M KP+ T
Sbjct: 575 MYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHAT 634
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ VL AC H GLV++G +F++M Y + P+LEHY C++D++GR+G + +A ELI +
Sbjct: 635 FLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGM 694
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P E + +I + LLS C+I+GNV++ EK A + ++E +DS+ + LL+NIYA+A W
Sbjct: 695 PFEADAVI---WRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWN 751
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+VT +R+ M+ G++K PGCS IEI +H FLVGD +H KEIY LD
Sbjct: 752 EVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLD 801
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 246/502 (49%), Gaps = 35/502 (6%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G+ Q M+F + G++ A+K+F ++ ++++N LI + G RK +
Sbjct: 102 GMPQRDTVSWNAMLF-GYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
+F ++ G D T+ V K+ L + G ++HG VK G + D ++++DMY
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
K+ + F MP+K+ VSW+ I+G V+ +++F+ M Q + + T
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEM-QKAGVGVSQSTFA 279
Query: 195 STLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
S +C L L LG ++H + + + ++G A LDMY KC LS+A++LF+ +PN
Sbjct: 280 SVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH 339
Query: 254 NVICWTSMVSGYVNC----------------------GQLE--KARDLFDRSPVR-DIVL 288
N+ + +++ GY G LE + L +S + +I +
Sbjct: 340 NLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICV 399
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ--GKWIHGY 346
A+++ Y + EA +F EM + D A++ Q G E+ +IH
Sbjct: 400 ANAILDMYGKCGALVEACLVFEEM----VSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNR 455
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I ++R+ +D+ V ALI+MY+KCG++EKA ++ L E+ SW +II G ++ + +A
Sbjct: 456 IIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 515
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
+ FS+M+ G PD+ T+ +L C++ V+ G++ + + ++Q L+D
Sbjct: 516 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK-KELQSDAYISSTLVD 574
Query: 467 LLGRAGLLDEAEELIRKIPNEN 488
+ + G + + + + K PN +
Sbjct: 575 MYSKCGNMQDFQLIFEKAPNRD 596
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 146/307 (47%), Gaps = 6/307 (1%)
Query: 192 TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T C+ K L GK+ H R I E + T + N L+ MY KC L A ++FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
P ++ + W +M+ GY G + A+ LFD P RD+V W ++I+GY+ + + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+M + D+ +L C+ L G IHG + D V +AL++MYAKC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
++ +++ F+ + EK+ SW++II G N + LELF +M G TF V
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN-- 488
+C+ + G + + + +D+ + L +A++L +PN N
Sbjct: 284 SCAGLSALRLGSQLHGHALKT-DFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342
Query: 489 --NEIIV 493
N IIV
Sbjct: 343 SYNAIIV 349
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 188/427 (44%), Gaps = 89/427 (20%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAK------------KGSFRKSLLL---FSKLRE 81
NL A+K+F S+ + L +YN +I +A+ G+FR ++ L+
Sbjct: 325 NLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQV 384
Query: 82 RGVSPDNFTYP----------------------FVFK------AVGWLGEVKKGEK---- 109
G+S + VF+ AV W + E+
Sbjct: 385 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 444
Query: 110 -------VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+H ++K+ L D++V +++DMY G + +KL D + ++ VVSWN IS
Sbjct: 445 EKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIIS 504
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELE 221
G + E+A F +M + + PD T + L C L +ELGK+IH + I +EL+
Sbjct: 505 GFSLQKQSEEAQKTFSKMLE-MGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 563
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ + L+DMY KCG + + + +F++ PN++ + W +MV GY G E
Sbjct: 564 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGE--------- 614
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG- 340
EA+ +F MQ+ +KP+ +A+L C +G +E+G
Sbjct: 615 ----------------------EALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGL 652
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAM 399
+ H ++ + + ++++ + G + KALE+ + E DA W +++ +
Sbjct: 653 HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKI 712
Query: 400 NGKINKA 406
+G + A
Sbjct: 713 HGNVEVA 719
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/555 (21%), Positives = 221/555 (39%), Gaps = 99/555 (17%)
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+ +F+ + G++ H ++ T + +V N ++ MY + K+FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 150 PDKDVVSWNVS-------------------------------ISGHVKCMRFEDAVDVFR 178
P +D VSWN ISG++ +DVF
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 179 RM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
+M R G D T L +C++L++ G +IH + + + G+ALLDMY K
Sbjct: 164 QMGRMGTVF--DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 221
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR---------------- 280
C L + + F MP KN + W+++++G V L +LF
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281
Query: 281 -------SPVR----------------DIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
S +R D+V+ TA ++ Y++ N +A LF + L
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNL 341
Query: 318 KP-----------------DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+ D+ L CA + +G +HG ++ + VA
Sbjct: 342 QSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN 401
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF--SQMISGGA 418
A+++MY KCG + +A +F E+ +DA SW +II NG K L LF +++I
Sbjct: 402 AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRL 461
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
D I ++ S G++++ + + + E + + +I +EA+
Sbjct: 462 GLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVS-----WNAIISGFSLQKQSEEAQ 516
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE-SKDSSFHTLLANIY 537
+ K+ + Y +L C V++G+++ A + K E D+ + L ++Y
Sbjct: 517 KTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMY 576
Query: 538 ASANRWEDVTNVRQK 552
+ +D + +K
Sbjct: 577 SKCGNMQDFQLIFEK 591
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 202/484 (41%), Gaps = 77/484 (15%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
DT N+++ Y G I +KLFD MP++DVVSWN ISG++ +DVF +M
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGC 239
R G D T L +C++L++ G +IH + + + G+ALLDMY KC
Sbjct: 167 RMGTVF--DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK- 223
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+L+ + F P ++ V W+A+I G VQ
Sbjct: 224 ------------------------------KLDCSIQFFHSMPEKNWVSWSAIIAGCVQN 253
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ + LF+EMQ + + ++ CA L AL G +HG+ + D V+
Sbjct: 254 DDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG 313
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TA ++MY KC + A ++F L + S+ +II G A + K G
Sbjct: 314 TATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDK--------------GLG 359
Query: 420 PDDITFIGVLSACS--HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
D+++ G AC+ G L EG + + ++ Q + ++D+ G+ G L EA
Sbjct: 360 LDEVSLSGAFRACAVIKGDL--EGLQ-VHGLSMKSLCQSNICVANAILDMYGKCGALVEA 416
Query: 478 ----EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK---DSSFH 530
EE++ + N II +A GN + L I+S+ DS
Sbjct: 417 CLVFEEMVSRDAVSWNAII--------AAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVG 468
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
L ++Y+ E + ++ E V + N II F + S K
Sbjct: 469 IALIDMYSKCGMMEKAEKLHDRLAEQTV--------VSWNAIISGFSLQKQSEEAQKTFS 520
Query: 591 SMLD 594
ML+
Sbjct: 521 KMLE 524
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 145/292 (49%), Gaps = 9/292 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + AEK+ + ++++N +I F+ + ++ FSK+ E GV PDNFTY +
Sbjct: 479 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 538
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
L V+ G+++H ++K L+ D Y+ ++++DMY G + + + +F++ P++D V
Sbjct: 539 DTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 598
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN + G+ + E+A+ +F M Q N+ P+ T ++ L AC + +E G
Sbjct: 599 TWNAMVCGYAQHGLGEEALKIFEYM-QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHS 657
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE 272
+ P + + ++D+ + G +S+A EL + MP + + W +++S G +E
Sbjct: 658 MLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVE 717
Query: 273 ----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
A + P D + + N Y ++E L + M+ LK +
Sbjct: 718 VAEKAAYSILQLEP-EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKE 768
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/654 (31%), Positives = 325/654 (49%), Gaps = 83/654 (12%)
Query: 26 LMVFCTHPSH-----GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR 80
LMV H +H A +F + + ++ ++I + G F F ++
Sbjct: 154 LMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML 213
Query: 81 ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKIC 140
G+ PD F Y + ++ L ++ G+ VH +V G +V S+++MY LG I
Sbjct: 214 NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE 273
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
+ +F+ M + + VSWN ISG +A D+F RM+ G P+ T+VS A
Sbjct: 274 DSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGA-CTPNMYTLVSVSKAV 332
Query: 201 TALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC---------------------- 237
L ++ +GKE+ ++ +E ++G AL+DMY KC
Sbjct: 333 GKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTP 392
Query: 238 -----------GCLSEARELFDEMPNK-------------NVICWT-------------- 259
GC EA EL+ +M N I +
Sbjct: 393 WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 452
Query: 260 -------------SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
++ Y CG LE R +FDR RDIV WT ++ Y Q + +EA+
Sbjct: 453 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 512
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
A F M+ P++F ++L CA L LE G+ +HG + + + + + +ALI+MY
Sbjct: 513 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 572
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKCG I +A ++F ++ D SWT+II G A +G + AL+LF +M G K + +T +
Sbjct: 573 AKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLL 632
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
VL ACSHGG+V+EG +F M + Y + P++EHY C+IDLLGR G LD+A E IRK+P
Sbjct: 633 CVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPM 692
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
E NE++ + LL CR++GNV++GE A + I + S+ + LL+N Y +ED
Sbjct: 693 EPNEMV---WQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDG 749
Query: 547 TNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++R MK+ GV+K PG S I + G +H+F GD H + KEIY L+ + + +
Sbjct: 750 LSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKI 803
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVD--AVVATALIEMYAKCGLIEKALEIFYE 381
L+ +L CA+ G++ + K +HG + ++ V+ +Y+KC A +F E
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+ +++ SWT +I G +G + F +M++ G PD + ++ +C
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC 231
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 200/582 (34%), Positives = 314/582 (53%), Gaps = 48/582 (8%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLG--EVKKGEKVHG 112
+N +I A+A+ ++ +F L G + PD++++ + A G L V+ ++H
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHC 183
Query: 113 YVVKTGLEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSW------------ 157
V+K+G VCN+++ +Y + +K+ DEMP+KD ++W
Sbjct: 184 SVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGD 243
Query: 158 -------------------NVSISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTL 197
N ISG+V +A ++FRRM +P DE T S L
Sbjct: 244 VGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMV--LERVPLDEFTFTSVL 301
Query: 198 SACTALKNLELGKEIH-RYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPN 252
SAC + GK +H + I + F P + NAL+ Y KCG ++ AR +FD M
Sbjct: 302 SACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTL 361
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+V+ W +++SGYV L+KA ++F+ P ++ + W M++GYV ++A+ LF +M
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKM 421
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ +KP + + C +LGAL+ GK +HG+I + ALI MYA+CG +
Sbjct: 422 RSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAV 481
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
++A +F + D+ SW ++I L +G +ALELF +M++ G PD I+F+ VL+AC
Sbjct: 482 KEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC 541
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
+H GLVDEG R+F +M + I P +HY LIDLLGRAG + EA +LI+ +P E I
Sbjct: 542 NHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI 601
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+ A+LS CR G++++G A L K+ + + LL+N Y++A W D VR+
Sbjct: 602 ---WEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKL 658
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
M++ GV+K PGCS IE +H FLVGD H E E+Y L+
Sbjct: 659 MRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLE 700
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 184/366 (50%), Gaps = 17/366 (4%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
S++ Y ++ FD +P +D V N IS + + AV VFR +
Sbjct: 92 TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 185 NLMPDEGTVVSTLSACTALKNLELGK--EIHRYINQELEFTPI-MGNALLDMYCKCG--- 238
+L PD+ + + LSA L N+ + ++H + + + + NAL+ +Y KC
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+AR++ DEMPNK+ + WT+MV GYV G + AR +F+ + V+W AMI+GYV
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI---NENRITVD 355
EA LFR M + R+ D+F ++L+ CA +G GK +HG I N +
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331
Query: 356 AV-VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
A+ V AL+ Y+KCG I A IF + KD SW +I+ G + ++KA+E+F +M
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM- 390
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
++++++ ++S HGG ++ + FN M ++P Y I G G L
Sbjct: 391 ---PYKNELSWMVMVSGYVHGGFAEDALKLFNKMRS-ENVKPCDYTYAGAIAACGELGAL 446
Query: 475 DEAEEL 480
++L
Sbjct: 447 KHGKQL 452
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 184/445 (41%), Gaps = 70/445 (15%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + + +N +I + G ++ LF ++ V D FT+ V
Sbjct: 242 GDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVL 301
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEF----DTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A +G G+ VHG +++ F V N+++ Y G I +++FD M
Sbjct: 302 SACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTL 361
Query: 152 KDVVSWNVSISGHVK--CMR-----------------------------FEDAVDVFRRM 180
KDVVSWN +SG+V+ C+ EDA+ +F +M
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKM 421
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
R N+ P + T ++AC L L+ GK++H +I Q E + GNAL+ MY +CG
Sbjct: 422 RSE-NVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGA 480
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ EA +F MPN + + W +M+S G +A +LFDR
Sbjct: 481 VKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDR------------------- 521
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
M + PD+ + +LT C G +++G ++ + I
Sbjct: 522 ------------MVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDH 569
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
T LI++ + G I +A ++ + E + W +I+ G +G + Q+
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629
Query: 418 AKPDDITFIGVLSACSHGGLVDEGR 442
+ D + + + G VD R
Sbjct: 630 PQHDGTYILLSNTYSAAGCWVDAAR 654
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 51/326 (15%)
Query: 5 KQIQAQIFQIGLQQNPETL----NKLMVFCTHPSHGNLLYAEKIF--------------- 45
K + QI ++ PE N L+ F + GN+ A +IF
Sbjct: 314 KSVHGQIIRLQPNFVPEAALPVNNALVTF--YSKCGNIAVARRIFDNMTLKDVVSWNTIL 371
Query: 46 -GSIQSPCL---------------LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNF 89
G ++S CL L++ +++ + G +L LF+K+R V P ++
Sbjct: 372 SGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDY 431
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
TY A G LG +K G+++HG++V+ G E N+++ MY G + +F M
Sbjct: 432 TYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVM 491
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P+ D VSWN IS + +A+++F RM + PD + ++ L+AC + L
Sbjct: 492 PNIDSVSWNAMISALGQHGHGREALELFDRMVAE-GIYPDRISFLTVLTAC---NHSGLV 547
Query: 210 KEIHRYI-NQELEFTPIMG----NALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVS 263
E RY + + +F I G L+D+ + G + EAR+L MP W +++S
Sbjct: 548 DEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607
Query: 264 GYVNCGQLE----KARDLFDRSPVRD 285
G G +E A LF +P D
Sbjct: 608 GCRTSGDMELGAHAADQLFKMTPQHD 633
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/613 (34%), Positives = 323/613 (52%), Gaps = 46/613 (7%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F +++ T N ++ + ++G L A +F +I P +YN L+ A A S
Sbjct: 59 RLFAAMPRRSTSTYNAMLA--GYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSL 116
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFK----------------------AVGWLG----E 103
+ LF ++ R D+ TY + AV W G
Sbjct: 117 ADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAY 172
Query: 104 VKKG--EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
V+ G E+ G + + E+D N++M Y GK+ ++LFD MP +DVVSWN+ +
Sbjct: 173 VRNGRVEEARG-LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMV 231
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
SG+ R D V+ RR+ + D T + +S LE E R + E
Sbjct: 232 SGYA---RRGDMVEA-RRLFDAAPVR-DVFTWTAVVSGYAQNGMLE---EARRVFDAMPE 283
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ NA++ Y + + EA+ELF+ MP +NV W +M++GY G LE+A+ +FD
Sbjct: 284 RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P +D V W AM+ Y Q +E + LF EM ++ +L+ CA + ALE G
Sbjct: 344 PQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGM 403
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+HG + V V AL+ MY KCG +E A F E+ E+D SW ++I G A +G
Sbjct: 404 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 463
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ALE+F M + KPDDIT +GVL+ACSH GLV++G +F +M + + K EHY
Sbjct: 464 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY 523
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C+IDLLGRAG L EA +L++ +P E + ++GALL A RI+ N ++G A + +
Sbjct: 524 TCMIDLLGRAGRLAEAHDLMKDMPFEPDST---MWGALLGASRIHRNPELGRSAAEKIFE 580
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+E +++ + LL+NIYAS+ +W D +R M+E GV+KVPG S IE+ +H F GD
Sbjct: 581 LEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDC 640
Query: 582 SHSEMKEIYSMLD 594
H E ++IY+ L+
Sbjct: 641 VHPEKEKIYAFLE 653
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 39/355 (10%)
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
LE + N + + G++ + ++LF MP + ++N ++G+ R A +FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 179 RMRQGCNLMPDEGTVVSTLSACTAL-------------------------KNLELGKEIH 213
+ + N T++ L+ ++L N L
Sbjct: 94 AIPRPDNY--SYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLAR 151
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
Y + E + N +L Y + G + EAR LF+ +VI W +++SGYV G++ +
Sbjct: 152 HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSE 211
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
AR+LFDR P RD+V W M++GY + EA LF + D F A+++G AQ
Sbjct: 212 ARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPV----RDVFTWTAVVSGYAQ 267
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
G LE+ + + + E +AV A++ Y + ++++A E+F + ++ ASW ++
Sbjct: 268 NGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+ G A G + +A +F M + D +++ +L+A S GG +E + F M
Sbjct: 324 LTGYAQAGMLEEAKAVFDTM----PQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 148/349 (42%), Gaps = 60/349 (17%)
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE------- 272
LE I N + + + G +++A LF MP ++ + +M++GY G+L
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 273 ------------------------KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
AR LFD PVRD V + MI+ + V+L
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHG----LVSL 149
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
R + + D +L + G +E+ + G N +R D + AL+ Y +
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR---GLFN-SRTEWDVISWNALMSGYVQ 205
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP--DDITFI 426
G + +A E+F + +D SW ++ G A G + +A LF A P D T+
Sbjct: 206 WGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD------AAPVRDVFTWT 259
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
V+S + G+++E RR F+ M E + + ++ + ++DEA+EL +P
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS-SFHTLLA 534
N V + +L+ Y M E+ A+ + + KD+ S+ +LA
Sbjct: 315 RN----VASWNTMLTG---YAQAGMLEEAKAVFDTMPQKDAVSWAAMLA 356
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 294/492 (59%), Gaps = 5/492 (1%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G+K+H +++KTG++ + N++++MYG G I + LF+++P +D +SW ++ + +
Sbjct: 22 GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQ 81
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
+ +F M + L PD + AC L ++ GK++H +I + +
Sbjct: 82 ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDV 141
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ ++L+DMY KCG R +FD + +KN I WT+M+SGY G+ A LF + PV++
Sbjct: 142 VKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKN 201
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLK-PDKFILVALLTGCAQLGALEQGKWIH 344
++ WTA+I+G VQ + ++ LF EM+ + D FIL +++ A L L GK IH
Sbjct: 202 LLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIH 261
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ V+ AL++MYAKC + A +IF + ++D SWTSII G A +G
Sbjct: 262 CLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAE 321
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+AL L+++M+S G KP+++TF+G++ ACSH GLV +GR FFN+M + Y I P L+HY CL
Sbjct: 322 EALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCL 381
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLL R+G L+EAE LI+ +P + +E + ALLSAC + N +G ++A L ++
Sbjct: 382 LDLLSRSGHLEEAENLIKAMPFKPDEAT---WAALLSACNHHRNTLIGIRVADHLLSLKP 438
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+D S + LL+NIYASA WE V+ VR+ M M V+K PG S I + FL G+ SH
Sbjct: 439 EDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHP 498
Query: 585 EMKEIYSMLDRM 596
+EI+ +L+ +
Sbjct: 499 AKEEIFGLLEEL 510
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 171/386 (44%), Gaps = 67/386 (17%)
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL-- 136
++ G+ PD++ + + KA LG +K+G++VH + + + D V +S++DMY
Sbjct: 96 FKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGL 155
Query: 137 -----------------------------GKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
G+ + +LF +MP K+++SW ISG V+
Sbjct: 156 PDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQS 215
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIM 226
+ D+ +F MR + D + S + A L L LGK+IH I E + +
Sbjct: 216 GNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFV 275
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
NAL+DMY KC + A+++F M ++++ WTS++ G G E
Sbjct: 276 SNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAE-------------- 321
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW-IHG 345
EA++L+ M LKP++ V L+ C+ +G + +G++ +
Sbjct: 322 -----------------EALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNS 364
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKIN 404
I + I T L+++ ++ G +E+A + + K D A+W +++ +
Sbjct: 365 MIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTL 424
Query: 405 KALELFSQMISGGAKPDDITFIGVLS 430
+ + ++S KP+D + +LS
Sbjct: 425 IGIRVADHLLS--LKPEDPSTYILLS 448
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 5/233 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFV 94
G L A ++F + LL++ LI + G++ S LF ++R +G+ D F +
Sbjct: 185 GRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSI 244
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A L + G+++H V+ G E +V N+++DMY + KK+F M +D+
Sbjct: 245 IGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDI 304
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSW I G + E+A+ ++ RM L P+E T V + AC+ + + G+
Sbjct: 305 VSWTSIIVGTAQHGLAEEALSLYNRML-STGLKPNEVTFVGLIYACSHVGLVSKGRYFFN 363
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG 264
+ ++ P + + LLD+ + G L EA L MP K + W +++S
Sbjct: 364 SMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSA 416
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 15/239 (6%)
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
LV L CA+ + GK +H +I + I ++ LI MY KCGLI+ AL +F +L
Sbjct: 6 LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGR 442
+D SW SI+ + L +F M G +PD F ++ AC+ G + +G+
Sbjct: 66 HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
+ T V + L+D+ + GL D + I ++N ++
Sbjct: 126 QVHATFI-VSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKN---------SISWT 175
Query: 503 CRIYGNVDMGEKLAA--LLEKIESKD-SSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
I G G KL A L +K+ K+ S+ L++ + S N W D + +M+ G+
Sbjct: 176 AMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGN-WVDSFYLFMEMRSKGI 233
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 315/582 (54%), Gaps = 48/582 (8%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLG--EVKKGEKVHG 112
+N +I A+A+ ++ +F L G + PD++++ + A G L V+ ++
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQC 183
Query: 113 YVVKTGLEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSW------------ 157
V+K+G V N+++ +Y L + +K+ DEMPDKD ++W
Sbjct: 184 SVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGD 243
Query: 158 -------------------NVSISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTL 197
N ISG+V +A ++FRRM +P DE T S L
Sbjct: 244 VGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMV--LERVPLDEFTFTSVL 301
Query: 198 SACTALKNLELGKEIHRYINQ-ELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPN 252
SAC GK +H I + + F P + NAL+ +Y KCG ++ AR +FD M +
Sbjct: 302 SACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKS 361
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+V+ W +++SGYV L+KA ++F+ P ++ + W M++GYV ++A+ LF M
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRM 421
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ +KP + ++ C +LG+L+ GK +HG++ + ALI MYA+CG +
Sbjct: 422 RAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAV 481
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
++A +F + D+ SW ++I L +G +ALELF +M++ G PD I+F+ VL+AC
Sbjct: 482 KEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC 541
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
+H GLVDEG ++F +M + I P +HY LIDLLGRAG + EA +LI+ +P E I
Sbjct: 542 NHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI 601
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+ A+LS CR G++++G A L K+ + + LL+N Y++A RW D VR+
Sbjct: 602 ---WEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKL 658
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
M++ GV+K PGCS IE +H F+VGD H E ++Y L+
Sbjct: 659 MRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLE 700
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 189/372 (50%), Gaps = 29/372 (7%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
S++ Y G++ FD +P +D V N IS + + AV VFR +
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI---------MGNALLDMYC 235
+L PD+ + + LSA L N+ + R+ Q L+ + + + NAL+ +Y
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISV-----RHCAQ-LQCSVLKSGAGGVLSVSNALVALYM 205
Query: 236 KCGCLS---EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
KC L +AR++ DEMP+K+ + WT+MV GYV G + AR +F+ V+ V+W AM
Sbjct: 206 KCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAM 265
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE--- 349
I+GYV EA LFR M + R+ D+F ++L+ CA G GK +HG I
Sbjct: 266 ISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQP 325
Query: 350 NRITVDAV-VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
N + A+ V AL+ +Y+KCG I A IF ++ KD SW +I+ G + ++KA+E
Sbjct: 326 NFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVE 385
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
+F +M ++++++ ++S HGG ++ + FN M ++P Y I
Sbjct: 386 VFEEM----PYKNELSWMVMVSGYVHGGFSEDALKLFNRM-RAEDVKPCDYTYAGAISAC 440
Query: 469 GRAGLLDEAEEL 480
G G L ++L
Sbjct: 441 GELGSLKHGKQL 452
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 184/445 (41%), Gaps = 70/445 (15%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + + +N +I + G ++ LF ++ V D FT+ V
Sbjct: 242 GDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVL 301
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEF----DTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A G G+ VHG + + F V N+++ +Y G I +++FD M
Sbjct: 302 SACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKS 361
Query: 152 KDVVSWNVSISGHVK--CMR-----------------------------FEDAVDVFRRM 180
KDVVSWN +SG+V+ C+ EDA+ +F RM
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRM 421
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
R ++ P + T +SAC L +L+ GK++H ++ Q E + GNAL+ MY +CG
Sbjct: 422 RAE-DVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGA 480
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ EA +F MPN + + W +M+S G +A +LFDR
Sbjct: 481 VKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDR------------------- 521
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
M + PD+ + +LT C G +++G ++ + I
Sbjct: 522 ------------MVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDH 569
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
T LI++ + G I +A ++ + E + W +I+ G +G + Q+
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629
Query: 418 AKPDDITFIGVLSACSHGGLVDEGR 442
+ D + + + G VD R
Sbjct: 630 PQHDGTYILLSNTYSAAGRWVDAAR 654
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 168/384 (43%), Gaps = 55/384 (14%)
Query: 5 KQIQAQIFQIGLQQNPET---LNKLMVFCTHPSHGNLLYAEKIF---------------- 45
K + QI ++ PE +N +V + GN+ A +IF
Sbjct: 314 KSVHGQITRLQPNFVPEAALPVNNALV-TLYSKCGNIAVARRIFDNMKSKDVVSWNTILS 372
Query: 46 GSIQSPCL---------------LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
G ++S CL L++ +++ + G +L LF+++R V P ++T
Sbjct: 373 GYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYT 432
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
Y A G LG +K G+++HG++V+ G E N+++ MY G + +F MP
Sbjct: 433 YAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMP 492
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+ D VSWN IS + +A+++F RM + PD + ++ L+AC ++ G
Sbjct: 493 NIDSVSWNAMISALGQHGHGREALELFDRM-VAEGIYPDRISFLTVLTACNHSGLVDEGF 551
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVN 267
+ + ++ P + L+D+ + G + EAR+L MP W +++SG
Sbjct: 552 QYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 611
Query: 268 CGQLE----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G +E A LF +P D + + N Y R+ +A + + M+ +K +
Sbjct: 612 SGDMELGAHAADQLFKMTPQHDGT-YILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP-- 668
Query: 324 LVALLTGCAQLGALEQGKWIHGYI 347
GC+ +E G +H ++
Sbjct: 669 ------GCSW---IEAGNKVHVFV 683
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 170/381 (44%), Gaps = 33/381 (8%)
Query: 182 QGCNLMPDEGTVV-STLSACTALKNLELGKEIH----RYINQELEFTPIMGN---ALLDM 233
QG +P + +V+ L+A +L + + + R + L P + L+ +
Sbjct: 9 QGVTSLPHQCSVLLRRLAASRSLTSSSFLRALRCLHARLLTSALLHAPPHPHLTLRLIHL 68
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RDIVLWTA 291
Y G L A LF P + TS+V+ Y G+L A FD P RD VL A
Sbjct: 69 YTLSGDLPAAATLFRADPCP--VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNA 126
Query: 292 MINGYVQFNRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLG--ALEQGKWIHGYIN 348
+I+ Y + + AVA+FR + L+PD + ALL+ L ++ + +
Sbjct: 127 VISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVL 186
Query: 349 ENRITVDAVVATALIEMYAKCGLIEK---ALEIFYELREKDAASWTSIICGLAMNGKINK 405
++ V+ AL+ +Y KC +E A ++ E+ +KDA +WT+++ G G +
Sbjct: 187 KSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGA 246
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH-YGCL 464
A +F ++ D+ + ++S H G+V E F M V + P E + +
Sbjct: 247 ARSVFEEV----DVKFDVVWNAMISGYVHSGMVVEAFELFRRM--VLERVPLDEFTFTSV 300
Query: 465 IDLLGRAGLLDEAE----ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
+ AG + ++ R PN E +P+ AL++ GN+ + + + +
Sbjct: 301 LSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARR---IFD 357
Query: 521 KIESKD-SSFHTLLANIYASA 540
++SKD S++T+L+ S+
Sbjct: 358 NMKSKDVVSWNTILSGYVESS 378
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/460 (38%), Positives = 275/460 (59%), Gaps = 9/460 (1%)
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
++ + VSW I+ + R +A F MR + P+ T ++ LS C +
Sbjct: 19 LNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLS-GVEPNHITFIALLSGCGDFPS 77
Query: 206 LE--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L +H Y + L+ T +M G A++ MY K G + +AR +FD M + N + W +M
Sbjct: 78 GSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTM 137
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ GY+ GQ++ A +FD+ P RD++ WTAMING+V+ +EA+ FREMQI ++PD
Sbjct: 138 IDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDY 197
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
++A L C LGAL G W+H Y+ + V+ +LI++Y +CG +E A E+F +
Sbjct: 198 VAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDK 257
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ ++ SW S+I G A NG +++L F +M G KPD +TF G L+ACSH GLV+EG
Sbjct: 258 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 317
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
R+F TM Y I P++EHYGCL+DL RAG L++A ++I +P + NE+++ G+LL+
Sbjct: 318 LRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVI---GSLLA 374
Query: 502 ACRIYG-NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
ACR +G N + E+L L + K S + +L+N+YA+ +WE + +R+KMK +G++K
Sbjct: 375 ACRTHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKK 434
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PG SSIEI+ H F+ GD +H E I +L+ ++ L
Sbjct: 435 QPGFSSIEIDDCTHVFMAGDSAHVETAIIREVLELVSSDL 474
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 166/365 (45%), Gaps = 68/365 (18%)
Query: 50 SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL--GEVKKG 107
S +++ I + G ++ FS +R GV P++ T+ + G G
Sbjct: 24 SETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLS 83
Query: 108 EKVHGYVVKTGLE--------------------------FD------TYVCNSIMDMYGV 135
+HGY K GL+ FD + N+++D Y
Sbjct: 84 NLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMR 143
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
G++ N K+FD+MP++D++SW I+G VK E+A+ FR M Q + PD +++
Sbjct: 144 SGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREM-QISGVRPDYVAIIA 202
Query: 196 TLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L+ACT L L G +HRY+ NQ+ + + N+L+D+YC+CGC+ ARE+FD+M +
Sbjct: 203 ALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRT 262
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
V+ W S++ G+ G E++ FR+MQ
Sbjct: 263 VVSWNSVIVGFAANGNAH-------------------------------ESLVYFRKMQE 291
Query: 315 IRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
KPD LT C+ +G +E+G ++ + I+ L+++Y++ G +E
Sbjct: 292 EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLE 351
Query: 374 KALEI 378
AL++
Sbjct: 352 DALKV 356
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + L+++ +I F KKG ++L+ F +++ GV PD
Sbjct: 145 GQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAAL 204
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G VH YV+ + + V NS++D+Y G + +++FD+M + VV
Sbjct: 205 NACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVV 264
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G +++ FR+M++ PD T L+AC+ + +E G +
Sbjct: 265 SWNSVIVGFAANGNAHESLVYFRKMQEE-GFKPDAVTFTGALTACSHVGLVEEGLRYFQT 323
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK 253
+ ++ +P + + L+D+Y + G L +A ++ + MP K
Sbjct: 324 MKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMK 363
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 184/504 (36%), Positives = 297/504 (58%), Gaps = 19/504 (3%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL--FDEMPDKDVVSWNVSISGHV 165
++VH ++ GL+ YV ++ L + L F+++ + +N I G++
Sbjct: 63 KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYL 122
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY------INQE 219
R +++ + + MR+ ++P T + AC A ++ LG++IH ++
Sbjct: 123 IEERLKESTEFYSLMRKE-GVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGED 181
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L +GN+++DMY KCG L R++FDEMPN++VI WT ++S YV G +E A +LFD
Sbjct: 182 LH----VGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFD 237
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
PV+D+V WT M++G+ Q + EA+ F +MQ ++ D+ L+ +++ CAQLGA +
Sbjct: 238 GLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKY 297
Query: 340 GKWIHGYINENRI--TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
WI ++ VV +ALI+MY+KCG + A +F ++E++ S++S+I G
Sbjct: 298 ADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGF 357
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
AM+G+++ A++LF +M+ KP+ +TFIGVL+ACSH G+V++G + F M + Y I+P
Sbjct: 358 AMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPS 417
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
+HY C++DLLGRAG L EA EL++ +P E + + +GALL ACRI+ + D+ A
Sbjct: 418 ADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGV---WGALLGACRIHKSPDIAAIAAN 474
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEI-NGIIHEF 576
L ++E + LLANIYAS RW DV+ VR+ M+ G+RK P S IE G++HEF
Sbjct: 475 HLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEF 534
Query: 577 LVGDPSHSEMKEIYSMLDRMAKTL 600
GD +H EI L+ + L
Sbjct: 535 FSGDMTHPRSGEIKQALEDLLDRL 558
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 198/431 (45%), Gaps = 69/431 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+TQ+KQ+ A+I GL Q+ L KL+ T + Y IF + P YN LI
Sbjct: 59 LTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALI 118
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT-GL 119
+ + + ++S +S +R+ GV P +FT+ +FKA G +V G ++HG + G
Sbjct: 119 RGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGF 178
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++DMY G + +K+FDEMP++DV+SW IS +VK E A ++F
Sbjct: 179 GEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDG 238
Query: 180 MR------------------------------QGCNLMPDEGTVVSTLSACTALKNLELG 209
+ Q + DE T++ +SAC L +
Sbjct: 239 LPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYA 298
Query: 210 KEIHRYINQELEF----TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
I R + ++ EF + ++G+AL+DMY KCG + +A +F M +NV ++SM+ G+
Sbjct: 299 DWI-RDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGF 357
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G++ A LFD EM +KP++ +
Sbjct: 358 AMHGRVHDAMKLFD-------------------------------EMVKTEIKPNRVTFI 386
Query: 326 ALLTGCAQLGALEQGKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELR- 383
+LT C+ G +EQG I + + I A T ++++ + G +++A E+ +
Sbjct: 387 GVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPI 446
Query: 384 EKDAASWTSII 394
E W +++
Sbjct: 447 EPHGGVWGALL 457
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 310/552 (56%), Gaps = 43/552 (7%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
++N +I A+ G ++L FS LR+ G+ P ++P K+ L ++ G H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
G E D +V ++++DMY G++ + + LFDE+P ++VVSW I+G+V+ + ++A+
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 1228
Query: 175 DVFR-------RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIM 226
+F+ + G N+ D +VS LSAC+ + + + +H ++ ++ + + +
Sbjct: 1229 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 1288
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
GN L+D Y KC GQ ++ +FD +D
Sbjct: 1289 GNTLMDAYAKC-------------------------------GQPLVSKKVFDWMEEKDD 1317
Query: 287 VLWTAMINGYVQFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+ W +MI Y Q EA+ +F M + + ++ + L A+L CA GAL GK IH
Sbjct: 1318 ISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHD 1377
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+ + + + V T++I+MY KCG +E A + F ++EK+ SWT+++ G M+G+ +
Sbjct: 1378 QVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKE 1437
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
AL++F +M+ G KP+ ITF+ VL+ACSH GLV+EG +FN M Y I+P +EHYGC++
Sbjct: 1438 ALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMV 1497
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DL GRAG L+EA LI+++ + + ++ +G+LL ACRI+ NVD+GE A L +++
Sbjct: 1498 DLFGRAGCLNEAYNLIKRMKMKPDFVV---WGSLLGACRIHKNVDLGEIAAQKLFELDPD 1554
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSE 585
+ ++ LL+N+YA A RW DV +R MK + K PG S +E+ G +H FLVGD H
Sbjct: 1555 NCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPH 1614
Query: 586 MKEIYSMLDRMA 597
+ IY L+++
Sbjct: 1615 HEMIYKYLEKLT 1626
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 223/382 (58%), Gaps = 4/382 (1%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K ++H ++++GL D + ++ +Y G+I LF ++ + +WN+ I +
Sbjct: 41 KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRAN 100
Query: 165 VKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
E A+ +++ M QG + D+ T + ACT +++LGK +H I
Sbjct: 101 TINGLSEQALMLYKNMVCQG--IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ N L+D Y KCG A ++F++M +NV+ WT+++SG ++CG L++AR +FD P
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+++V WTAMINGY++ + +EA+ LF+ MQ + P+++ +V+L+ C ++G L G+
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH Y +N I + + TALI+MY+KCG I+ A+E+F + K +W S+I L ++G
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+AL LFS+M KPD ITFIGVL AC H V EG +F MT+ Y I P EHY
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYE 398
Query: 463 CLIDLLGRAGLLDEAEELIRKI 484
C+ +L R+ LDEA + +++
Sbjct: 399 CMTELYARSNNLDEAFKSTKEV 420
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 191/370 (51%), Gaps = 66/370 (17%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L+QI A+I + GL + KL+ + +HG + YA +F IQ+PC +NL+I+A
Sbjct: 42 HLRQIHAKIIRSGLSNDQLLTRKLIHL--YSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
G ++L+L+ + +G++ D FT+PFV KA + G+ VHG ++K G D
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGD 159
Query: 123 TYVCNSIMDMY-----------------------------GVL--GKICNVKKLFDEMPD 151
+V N+++D Y G++ G + +++FDE+P
Sbjct: 160 VFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS 219
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K+VVSW I+G+++ + E+A+++F+RM Q N+ P+E T+VS + ACT + L LG+
Sbjct: 220 KNVVSWTAMINGYIRNQQPEEALELFKRM-QAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH Y I +E +G AL+DMY KCG + +A E+F+ MP K++ W SM++
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT------- 331
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+ ++G Q EA+ LF EM+ + +KPD + +L
Sbjct: 332 -------------------SLGVHGLGQ-----EALNLFSEMERVNVKPDAITFIGVLCA 367
Query: 331 CAQLGALEQG 340
C + +++G
Sbjct: 368 CVHIKNVKEG 377
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 317/572 (55%), Gaps = 45/572 (7%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
H NL A + + + ++N +I A+ G ++L FS LR+ G+ P ++P
Sbjct: 1964 HSNL--ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCT 2021
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
K+ L ++ G H G E D +V ++++DMY G++ + + LFDE+P ++V
Sbjct: 2022 IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNV 2081
Query: 155 VSWNVSISGHVKCMRFEDAVDVFR-------RMRQGCNLMPDEGTVVSTLSACTALKNLE 207
VSW I+G+V+ + ++A+ +F+ + G N+ D +VS LSAC+ +
Sbjct: 2082 VSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 2141
Query: 208 LGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
+ + +H ++ ++ + + +GN L+D Y KC
Sbjct: 2142 ITEGVHGFVVKKGFDGSIGVGNTLMDAYAKC----------------------------- 2172
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKPDKFILV 325
GQ ++ +FD +D + W +MI Y Q EA+ +F M + + ++ + L
Sbjct: 2173 --GQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLS 2230
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
A+L CA GAL GK IH + + + + V T++I+MY KCG +E A + F ++EK
Sbjct: 2231 AVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEK 2290
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ SWT+++ G M+G+ +AL++F +M+ G KP+ ITF+ VL+ACSH GLV+EG +F
Sbjct: 2291 NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF 2350
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
N M Y I+P +EHYGC++DL GRAG L+EA LI+++ + + ++ +G+LL ACRI
Sbjct: 2351 NAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV---WGSLLGACRI 2407
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ NVD+GE A L +++ + ++ LL+N+YA A RW DV +R MK + K PG S
Sbjct: 2408 HKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFS 2467
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+E+ G +H FLVGD H + IY L+++
Sbjct: 2468 LVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 2499
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 219/375 (58%), Gaps = 4/375 (1%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K ++H ++++GL D + ++ +Y G+I LF ++ + +WN+ I +
Sbjct: 41 KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRAN 100
Query: 165 VKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
E A+ +++ M QG + D+ T + ACT +++LGK +H I
Sbjct: 101 TINGLSEQALMLYKNMVCQG--IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ N L+D Y KCG A ++F++M +NV+ WT+++SG ++CG L++AR +FD P
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+++V WTAMINGY++ + +EA+ LF+ MQ + P+++ +V+L+ C ++G L G+
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH Y +N I + + TALI+MY+KCG I+ A+E+F + K +W S+I L ++G
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+AL LFS+M KPD ITFIGVL AC H V EG +F MT+ Y I P EHY
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYE 398
Query: 463 CLIDLLGRAGLLDEA 477
C+ +L R+ LDEA
Sbjct: 399 CMTELYARSNNLDEA 413
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 191/370 (51%), Gaps = 66/370 (17%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L+QI A+I + GL + KL+ + +HG + YA +F IQ+PC +NL+I+A
Sbjct: 42 HLRQIHAKIIRSGLSNDQLLTRKLIHL--YSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
G ++L+L+ + +G++ D FT+PFV KA + G+ VHG ++K G D
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGD 159
Query: 123 TYVCNSIMDMY-----------------------------GVL--GKICNVKKLFDEMPD 151
+V N+++D Y G++ G + +++FDE+P
Sbjct: 160 VFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS 219
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K+VVSW I+G+++ + E+A+++F+RM Q N+ P+E T+VS + ACT + L LG+
Sbjct: 220 KNVVSWTAMINGYIRNQQPEEALELFKRM-QAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH Y I +E +G AL+DMY KCG + +A E+F+ MP K++ W SM++
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT------- 331
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
+ ++G Q EA+ LF EM+ + +KPD + +L
Sbjct: 332 -------------------SLGVHGLGQ-----EALNLFSEMERVNVKPDAITFIGVLCA 367
Query: 331 CAQLGALEQG 340
C + +++G
Sbjct: 368 CVHIKNVKEG 377
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 330/660 (50%), Gaps = 78/660 (11%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ + + G Q+ L+ F + +GB+ A +F + + + +I + K
Sbjct: 58 QLHGFVVRSGFDQDVYVGTSLIDF--YSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTK 115
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G SL LF+++RE V PD + V A L ++ G+++H YV++ G E D V
Sbjct: 116 CGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSV 175
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N ++D Y ++ +KLFD+M K+++SW ISG+++ +A+ +F M +
Sbjct: 176 VNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR-LG 234
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCL---- 240
PD S L++C +L+ LE G+++H Y I LE + N L+DMY K L
Sbjct: 235 WKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAK 294
Query: 241 ---------------------------SEARELFDEMPNK-------------------- 253
SEA ELF EM +
Sbjct: 295 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLF 354
Query: 254 -------------------NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
++ ++++ Y C ++ AR +F+ +DIV+W AM
Sbjct: 355 ALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFF 414
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY Q +EA+ L+ +Q R KP++F AL+T + L +L G+ H + + +
Sbjct: 415 GYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDF 474
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
V AL++MYAKCG IE+A ++F +D W S+I A +G+ +AL +F +M+
Sbjct: 475 CPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMM 534
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
G +P+ +TF+ VLSACSH G V++G FN+M + I+P EHY C++ LLGR+G L
Sbjct: 535 KEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKL 593
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EA+E I K+P E I+ + +LLSACRI GNV++G+ A + + KDS + LL+
Sbjct: 594 FEAKEFIEKMPIEPAAIV---WRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLS 650
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NI+AS W DV VR +M V K PG S IE+N ++ F+ +H E I S+LD
Sbjct: 651 NIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLD 710
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 169/581 (29%), Positives = 282/581 (48%), Gaps = 91/581 (15%)
Query: 61 KAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
K +G ++L++F L R+ G P+ F V +A LG V+KG ++HG+VV++G
Sbjct: 9 KDMEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGF 68
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ D YV S++D Y G I + +FD++ +K V+W I+G+ KC R ++++F +
Sbjct: 69 DQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQ 128
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI---NQELEFTPIMGNALLDMYCK 236
MR+ N++PD V S LSAC+ L+ LE GK+IH Y+ E++ + + N L+D Y K
Sbjct: 129 MRE-TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV--NVLIDFYTK 185
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYV------------------------------ 266
C + R+LFD+M KN+I WT+M+SGY+
Sbjct: 186 CNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSV 245
Query: 267 --NCGQLE--------------------------------KARDLFDRSPVRD------I 286
+CG LE K+ L D V D +
Sbjct: 246 LTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNV 305
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
+ + AMI GY + EA+ LF EM++ P V+LL A L ALE K IHG
Sbjct: 306 ISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGL 365
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I + +++D +ALI++Y+KC ++ A +F E+ EKD W ++ G + + +A
Sbjct: 366 IIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEA 425
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQIQPKLEHYGCLI 465
L+L+S + KP++ TF +++A S+ + G++F N + ++ P + + L+
Sbjct: 426 LKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALV 483
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI-ES 524
D+ + G ++EA RK+ N + V + +++S +G + E L E + E
Sbjct: 484 DMYAKCGSIEEA----RKMFNSSIWRDVVCWNSMISTHAQHGEAE--EALGMFREMMKEG 537
Query: 525 KDSSFHTLLANIYA--SANRWEDVTNVRQKMKEMGVRKVPG 563
++ T +A + A A ED N M G++ PG
Sbjct: 538 IQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIK--PG 576
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/459 (38%), Positives = 274/459 (59%), Gaps = 9/459 (1%)
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
++ + +VSW I+ + +A F MR + P T ++ LS C +
Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLA-GVEPTHITFIALLSGCGDFPSG 62
Query: 207 E--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
LG +H Y + L+ +M G A+L MY K G + +AR +FD M +KN + W +M+
Sbjct: 63 SETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMI 122
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
GY+ GQ+ A LFD+ P D++ WTAM+NG+V+ +EA+ FREMQI +KPD
Sbjct: 123 DGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYV 182
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
++A L C LGAL G W+H Y+ + V+ +LI++Y +CG +E A E+F ++
Sbjct: 183 AIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKM 242
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
++ SW S+I G A NG +++L F +M G KP+ +TF G L+ACSH GLVDEG
Sbjct: 243 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGL 302
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
RFF +M Y I P++EHYGCL+DL RAG L++A ++++ +P + NE+++ G+LL+A
Sbjct: 303 RFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVI---GSLLAA 359
Query: 503 CRIYG-NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
CR +G N + E+L L + K S + +L+N+YA+ +WE + +R+KMK +G++K
Sbjct: 360 CRNHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQ 419
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PG SSIEI+ H F+ GD +H E I +L+ ++ L
Sbjct: 420 PGFSSIEIDDCTHVFMAGDSAHVETAYIREVLELISSDL 458
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 169/372 (45%), Gaps = 68/372 (18%)
Query: 50 SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL--GEVKKG 107
S ++++ I + ++ F+ +R GV P + T+ + G G G
Sbjct: 8 SETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLG 67
Query: 108 EKVHGYVVKTGLE--------------------------FD------TYVCNSIMDMYGV 135
+ +HGY K GL+ FD + N+++D Y
Sbjct: 68 DLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMR 127
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
G++ N KLFD+MP+ D++SW ++G VK E+A+ FR M Q + PD +++
Sbjct: 128 SGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREM-QISGVKPDYVAIIA 186
Query: 196 TLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L+ACT L L LG +HRY+ +Q+ + + N+L+D+YC+CGC+ ARE+FD+M +
Sbjct: 187 ALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRT 246
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
V+ W S++ G+ G E++ FR+MQ
Sbjct: 247 VVSWNSVIVGFAANGNAH-------------------------------ESLVYFRKMQE 275
Query: 315 IRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
KP+ LT C+ +G +++G ++ + I+ L+++Y++ G +E
Sbjct: 276 EGFKPNAVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLE 335
Query: 374 KALEIFYELREK 385
AL++ + K
Sbjct: 336 DALKVVQSMPMK 347
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 142/294 (48%), Gaps = 16/294 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + P L+++ ++ F KKG ++L+ F +++ GV PD
Sbjct: 129 GQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAAL 188
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G VH YV+ + + V NS++D+Y G + +++FD+M + VV
Sbjct: 189 NACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVV 248
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G +++ FR+M++ P+ T L+AC+ + ++ G +
Sbjct: 249 SWNSVIVGFAANGNAHESLVYFRKMQEE-GFKPNAVTFTGALTACSHVGLVDEGLRFFQS 307
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQ-- 270
+ ++ +P + + L+D+Y + G L +A ++ MP K N + S+++ N G
Sbjct: 308 MKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRNHGNNT 367
Query: 271 ------LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
++ DL +S ++L N Y +++ A + R+M+ + LK
Sbjct: 368 VLAERLMKHLSDLNVKSHSNYVIL----SNMYAADAKWEGASRMRRKMKGLGLK 417
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 294/522 (56%), Gaps = 20/522 (3%)
Query: 93 FVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
F+F + + K H +V +G Y+ N ++ +Y G + + +K+F+++
Sbjct: 29 FIFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAP 88
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
WN I GH + + ++++F+RM + + T LSAC + G++I
Sbjct: 89 STTVWNQIIKGHTRSKTSKKSIELFKRMTL-AGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 213 H-RYINQELEFTPIMGNALLDMYCKCGC-----LSEARELFDEMPNKNVICWTSMVSGYV 266
H R + + L+++Y G L A LFDEMP+ NV+ W S+++GYV
Sbjct: 148 HGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGYV 207
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G + AR +FD P R++ WT M+ G+ Q + A++LF +M+ ++ D+ LVA
Sbjct: 208 RRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVA 267
Query: 327 LLTGCAQLGALEQGKWIHGYINEN----RITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
L+ CA+LG L GKWIHGY+ + V + ALI MYA CG ++ A ++F E+
Sbjct: 268 ALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEI 327
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGG---AKPDDITFIGVLSACSHGGLVD 439
+++ SW+SII G A G +A+ +F M+ G +PD+ITFIG L+ACSH GL+
Sbjct: 328 PQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLIS 387
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
+G R F +M + + + P++EHYGC++DLL RAGLL EA LI +P + N + +GAL
Sbjct: 388 DGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAV---WGAL 444
Query: 500 LSACRIYGNVDMGEKLAALLE---KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
LS CR++ N ++ +A L ++ + + LLAN+YA+ RW+D VR+ M ++
Sbjct: 445 LSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDI 504
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
GV+K G S IEING++ F+VG+ +H ++ IY ML + +
Sbjct: 505 GVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEMLGNITR 546
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 202/442 (45%), Gaps = 86/442 (19%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L + AQI G Q LN L+ + S G+L A+K+F I +P +N +IK
Sbjct: 43 LAKTHAQIVVSGFSQKNYILNHLLSL--YISFGSLGSAQKVFEDITAPSTTVWNQIIKGH 100
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ + +KS+ LF ++ GV + FTY F+ A ++GE++HG V+ G +
Sbjct: 101 TRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNL 160
Query: 124 YVCNSIMDMY--GVLGKICNVKK---LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
YV +++++Y G G ++K+ LFDEMPD +VV WN ++G+V+ F+ A VF
Sbjct: 161 YVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFD 220
Query: 179 RM--------------------------------RQGCNLMPDEGTVVSTLSACTALKNL 206
M R G L D+ +V+ LSAC L +L
Sbjct: 221 EMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVEL--DQVALVAALSACAELGDL 278
Query: 207 ELGKEIHRYI-----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
LGK IH Y+ ++ L + NAL+ MY CG + A +LF+E+P +N + W+S+
Sbjct: 279 TLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQRNTVSWSSI 338
Query: 262 VSGYV--NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII---R 316
++G+ CG EA+ +F+ M
Sbjct: 339 ITGFAKQGCGV---------------------------------EAIRIFQLMLCSGQNE 365
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKA 375
++PD+ + LT C+ G + G + +++ + + ++++ ++ GL+ +A
Sbjct: 366 VRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEA 425
Query: 376 LEIFYELREK-DAASWTSIICG 396
L + + K + A W +++ G
Sbjct: 426 LSLIESMPMKPNNAVWGALLSG 447
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 307/544 (56%), Gaps = 56/544 (10%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+ NL++++ G S ++ +N +I+ +A G F++ + +F ++ +RG+ P NFTYP+V
Sbjct: 3 YSNLIFSQ--MGHDSSAEIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYV 60
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY---------GVLG--KICNVK 143
+ L +G++VH +VK+G E V NS+ +MY G+ K+ +
Sbjct: 61 INSCCELEWYGRGKRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYAR 120
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
K+FD+M + V WN I +V + A ++F ++MP+ V
Sbjct: 121 KIFDDMCVRPVELWNQMIGKYVNIGDVKSARELF-------DIMPERDIVS--------- 164
Query: 204 KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
N+++ Y K G ++ AR LF++MP KNVI WTSM+
Sbjct: 165 -----------------------WNSMILGYAKGGKVANARGLFEKMPEKNVISWTSMIG 201
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
Y + LE AR F+ P R++V W +MI+ Y + +F E++ LF +MQ + PD +
Sbjct: 202 AYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVTPDGYT 261
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
V++L+ C+ LG LE GK+IH Y++ + + +V TAL EMYA+CG ++KA +F ++
Sbjct: 262 FVSVLSACSNLGDLEFGKYIH-YLSGDLSQSEVMVGTALTEMYAQCGDVDKAFAVFIKIG 320
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
++D W II LA++G+ +A+++F M G KP+D TF L ACSHGGLV+EG
Sbjct: 321 KRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDFTFTSALFACSHGGLVEEGHI 380
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
FN+M + Y+I PK+ HYGCLID+L R G L+EA L+ +P + + V ++GALL C
Sbjct: 381 IFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMPFQPD---VAIWGALLGGC 437
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
R+ G++ + EK+ ++E+ +S + LL+NI+ASA +W + + R+KM E + K G
Sbjct: 438 RVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQWIEAADARKKMDEKKISKKTG 497
Query: 564 CSSI 567
S +
Sbjct: 498 SSVV 501
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 191/419 (45%), Gaps = 63/419 (15%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHP--------SHGNLLYAEKIFGSIQSPCLLA 55
K++ +I + G + + N L ++ P S+ L YA KIF + +
Sbjct: 74 KRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYARKIFDDMCVRPVEL 133
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW----LGEVKKGEKVH 111
+N +I + G + + LF + ER + V W LG K G+ +
Sbjct: 134 WNQMIGKYVNIGDVKSARELFDIMPERDI-------------VSWNSMILGYAKGGKVAN 180
Query: 112 GY-VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
+ + E + S++ Y + + F+ MP ++VVSWN IS + K +F
Sbjct: 181 ARGLFEKMPEKNVISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKF 240
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM-GNA 229
+++++F +M Q + PD T VS LSAC+ L +LE GK IH Y++ +L + +M G A
Sbjct: 241 VESLNLFVQM-QSEGVTPDGYTFVSVLSACSNLGDLEFGKYIH-YLSGDLSQSEVMVGTA 298
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
L +MY +CG + +A +F ++ ++V CW ++ KA L RS
Sbjct: 299 LTEMYAQCGDVDKAFAVFIKIGKRDVFCWNVII----------KALALHGRS-------- 340
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
+EA+ +F M+ LKP+ F + L C+ G +E+G I + +
Sbjct: 341 -------------EEAIKIFLLMRKTGLKPNDFTFTSALFACSHGGLVEEGHIIFNSMEK 387
Query: 350 NRITVDAVVATA-LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKA 406
+ + + LI+M + G +E+A+ + ++ + D A W +++ G + G + A
Sbjct: 388 DYKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMPFQPDVAIWGALLGGCRVTGDLKLA 446
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 293/491 (59%), Gaps = 27/491 (5%)
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC-----MRFEDAVDVFR 178
YVC+ YG NV F + + D+ ++N+ I ++ F A+ +++
Sbjct: 61 YVCS--FSYYGSFSYATNV---FHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYK 115
Query: 179 RMRQGC-NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI----MGNALLDM 233
+M C +++P+ T L CT + G+ IH Q ++F + + N+L+ +
Sbjct: 116 QMF--CKDIVPNCLTFPFLLKGCTQWLDGATGQAIH---TQVIKFGFLKDVYVANSLISL 170
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y G LS AR++FDEM +V+ W SMV G + G L+ A DLF + R+I+ W ++I
Sbjct: 171 YMAGGLLSNARKVFDEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSII 230
Query: 294 NGYVQFNRFDEAVALFREMQIIR---LKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
G Q E++ LF EMQI+ +KPDK + ++L+ CAQLGA++ GKW+HGY+ N
Sbjct: 231 TGLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRN 290
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
I D V+ TAL+ MY KCG ++KA EIF E+ EKDA++WT +I A++G KA F
Sbjct: 291 GIECDVVIGTALVNMYGKCGDVQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCF 350
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M G KP+ +TF+G+LSAC+H GLV++GR F+ M VY I+P++ HY C++D+L R
Sbjct: 351 LEMEKAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSR 410
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
A L DE+E LIR +P + + V ++GALL C+++GNV++GEK+ L +E + +F+
Sbjct: 411 ARLFDESEILIRSMPMKPD---VYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFY 467
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGV-RKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+IYA A ++ +R MKE + +K+PGCS IEING + EF G S MKE+
Sbjct: 468 VNWCDIYAKAGMFDAAKRIRNIMKEKRIEKKIPGCSMIEINGEVQEFSAGGSSELPMKEL 527
Query: 590 YSMLDRMAKTL 600
+L+ ++ +
Sbjct: 528 VLVLNGLSNEM 538
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 229/496 (46%), Gaps = 80/496 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPET---LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ +LK+ QI + + + +L+ C+ +G+ YA +F I++P L AYN
Sbjct: 31 LRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATNVFHMIKNPDLRAYN 90
Query: 58 LLIKAFAKKGS-----FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
++I+A+ S F K+L+L+ ++ + + P+ T+PF+ K + G+ +H
Sbjct: 91 IMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGATGQAIHT 150
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
V+K G D YV NS++ +Y G + N +K+FDEM DVV+WN + G ++ +
Sbjct: 151 QVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGCLRNGGLDM 210
Query: 173 AVDVFRRMRQGCNLM----------------------------------PDEGTVVSTLS 198
A+D+FR+M G N++ PD+ T+ S LS
Sbjct: 211 AMDLFRKM-NGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLS 269
Query: 199 ACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
AC L ++ GK +H Y+ + +E ++G AL++MY KCG + +A E+F+EMP K+
Sbjct: 270 ACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEMPEKDASA 329
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
WT M+S + G G+ FN F EM+ +
Sbjct: 330 WTVMISVFALHGL------------------------GWKAFN-------CFLEMEKAGV 358
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKAL 376
KP+ V LL+ CA G +EQG+W + V A ++++ ++ L +++
Sbjct: 359 KPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESE 418
Query: 377 EIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF-IGVLSACSH 434
+ + K D W +++ G M+G + ++ +I +P + F + +
Sbjct: 419 ILIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHLID--LEPHNHAFYVNWCDIYAK 476
Query: 435 GGLVDEGRRFFNTMTE 450
G+ D +R N M E
Sbjct: 477 AGMFDAAKRIRNIMKE 492
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 277/513 (53%), Gaps = 35/513 (6%)
Query: 85 SPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
+P + T P K+ L ++ GE++H +K + +V S++ +Y G + +
Sbjct: 522 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 581
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++FDEMP V W I+ ++ +AV V R + PD T V L+AC +
Sbjct: 582 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFAN-GMRPDSFTAVRVLTACARI 640
Query: 204 KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+L G+ + R QE G A ++V T+ V
Sbjct: 641 ADLATGETVWRAAEQE-------GVA-----------------------QSVFVATAAVD 670
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
YV CG++ KAR++FD+ +D V W AM+ GY EA+ LF MQ +KPD +
Sbjct: 671 LYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 730
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ L+ C +LGAL+ G+ ++ + + V+ TALI+MYAKCG +A +F ++R
Sbjct: 731 VAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR 790
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+KD W ++I GL M G A L QM G K +D TFIG+L +C+H GL+ +GRR
Sbjct: 791 KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 850
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+F+ MT++Y I P++EHYGC++DLL RAGLL EA +L+ +P N +I+ GALL C
Sbjct: 851 YFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL---GALLGGC 907
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
+I+ N ++ E + L +E +S + +L+NIY++ RWED +R MK GV KVP
Sbjct: 908 KIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPA 967
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
CS +E G +HEF VGD SH +IY LD +
Sbjct: 968 CSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDEL 1000
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 190/414 (45%), Gaps = 43/414 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A+ ++ NP L L+ + G L A+++F + P + + LI A+
Sbjct: 546 EQLHARSLKLPSHTNPHVLTSLLSL--YAKCGLLHRAQRVFDEMPHPSTVPWTALITAYM 603
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G R+++ + G+ PD+FT V A + ++ GE V + G+ +
Sbjct: 604 DAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVF 663
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V + +D+Y G++ +++FD+M KD V+W + G+ +A+D+F M Q
Sbjct: 664 VATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM-QAE 722
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMYCKCGCLSE 242
+ PD V LSACT L L+LG++ R ++ + EF P++G AL+DMY KCG E
Sbjct: 723 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWD-EFLDNPVLGTALIDMYAKCGSTVE 781
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F +M K++I W +M+ G G EK
Sbjct: 782 AWVVFQQMRKKDIIVWNAMILGLGMTGH-EKI---------------------------- 812
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATA 361
A AL +M+ +K + + LL C G ++ G ++ H I+
Sbjct: 813 --AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 870
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG-KINKALELFSQMI 414
++++ ++ GL+++A ++L + ++I G + G KI++ EL ++
Sbjct: 871 MVDLLSRAGLLQEA----HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVL 920
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/451 (39%), Positives = 275/451 (60%), Gaps = 24/451 (5%)
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT--ALKNLE 207
P +VSW SI+ H + + +A F RM Q + P+ T ++ LSACT L+ L
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRM-QIAGVRPNHITFLTLLSACTDFPLEGLR 108
Query: 208 LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
G IH Y+ + L+ +M G AL+DMY KCG L A +FDEM +N + W +M+ G
Sbjct: 109 FGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGC 168
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
+ G++ +A LFD+ RD + WT+MI G+V+ F++A+ FREMQ+ ++PD ++
Sbjct: 169 MRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTII 228
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L CA LGAL G WI+ ++ + + ++ +LI+MY++CG I A ++F ++ ++
Sbjct: 229 SVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR 288
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
SW S+I G A+NG +ALE F+ M G H GLVDEG +FF
Sbjct: 289 SLVSWNSMIVGFALNGHAEEALEFFNLMRKEG----------------HSGLVDEGLQFF 332
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+ M +I P++EHYGCL+DL RAG L++A +I +P + NE+++ G+LL+ACR
Sbjct: 333 DIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVL---GSLLAACRT 389
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+G+V + E+L L +++ S + LL+NIYA+ RW+ + VR+KMK +G+ K PG S
Sbjct: 390 HGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFS 449
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
SIE++G IHEF+ GD +H E + IY+MLD +
Sbjct: 450 SIEMDGSIHEFVAGDKTHVETQNIYAMLDHL 480
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 180/393 (45%), Gaps = 70/393 (17%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG--WLGEVKKGEKV 110
++++ I + G ++ FS+++ GV P++ T+ + A L ++ G +
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSI 113
Query: 111 HGYVVKTGLEFDTY-VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
H YV K GL+ + V +++DMY G++ +FDEM ++ VSWN I G CMR
Sbjct: 114 HAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDG---CMR 170
Query: 170 ----------------------------------FEDAVDVFRRMRQGCNLMPDEGTVVS 195
FE A++ FR M Q + PD T++S
Sbjct: 171 NGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREM-QLAGVEPDYVTIIS 229
Query: 196 TLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L+AC L L LG I+R++ Q+ + + N+L+DMY +CGC+ AR++F++MP ++
Sbjct: 230 VLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRS 289
Query: 255 VICWTSMVSGYVNCGQLEKARDLFD------------------------RSPVRDIVLWT 290
++ W SM+ G+ G E+A + F+ R I +
Sbjct: 290 LVSWNSMIVGFALNGHAEEALEFFNLMRKEGHSGLVDEGLQFFDIMKRTRKISPRIEHYG 349
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
+++ Y + R ++A+ + M +KP++ +L +LL C G + + + Y+ E
Sbjct: 350 CLVDLYSRAGRLEDALNVIANMP---MKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEV 406
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
D+ L +YA G + A ++ +++
Sbjct: 407 DPGSDSNYVL-LSNIYAAVGRWDGASKVRKKMK 438
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 147/325 (45%), Gaps = 52/325 (16%)
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ--LGAL 337
SP+ IV WT+ I + + + EA A F MQI ++P+ + LL+ C L L
Sbjct: 48 HSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGL 107
Query: 338 EQGKWIHGYINENRI-TVDAVVATALIEMYAKCGLIE----------------------- 373
G IH Y+ + + T + +V TAL++MY+KCG ++
Sbjct: 108 RFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDG 167
Query: 374 --------KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
+A+ +F ++ E+DA SWTS+I G G +ALE F +M G +PD +T
Sbjct: 168 CMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTI 227
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIP 485
I VL+AC++ G + G + N + ++ LID+ R G + A ++ ++P
Sbjct: 228 ISVLAACANLGALGLG-LWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMP 286
Query: 486 NEN----NEIIV--PLYGALLSACRIY---------GNVDMGEKLAALLEKIE--SKDSS 528
+ N +IV L G A + G VD G + ++++ S
Sbjct: 287 KRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGHSGLVDEGLQFFDIMKRTRKISPRIE 346
Query: 529 FHTLLANIYASANRWEDVTNVRQKM 553
+ L ++Y+ A R ED NV M
Sbjct: 347 HYGCLVDLYSRAGRLEDALNVIANM 371
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 161/373 (43%), Gaps = 60/373 (16%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
+F + +++ +I F KKG F ++L F +++ GV PD T V A LG
Sbjct: 180 LFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGA 239
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+ G ++ +V+K + + + NS++DMY G I +++F++MP + +VSWN I G
Sbjct: 240 LGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVG 299
Query: 164 HVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
E+A++ F MR +G + + DEG L+ ++ K R I+ +E
Sbjct: 300 FALNGHAEEALEFFNLMRKEGHSGLVDEG-----------LQFFDIMKRT-RKISPRIEH 347
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLF--- 278
L+D+Y + G L +A + MP K N + S+++ G + A L
Sbjct: 348 Y----GCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYL 403
Query: 279 -DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI--IRLKPDKFILVALLTGCAQLG 335
+ P D + + N Y R+D A + ++M+ I KP
Sbjct: 404 CEVDPGSD-SNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPG-------------FS 449
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
++E IH ++ ++ V+ A+++ +F ELR IC
Sbjct: 450 SIEMDGSIHEFVAGDKTHVETQNIYAMLD------------HLFLELR----------IC 487
Query: 396 GLAMNGKINKALE 408
G ++ K+ E
Sbjct: 488 GYVPEIEVGKSYE 500
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 277/513 (53%), Gaps = 35/513 (6%)
Query: 85 SPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
+P + T P K+ L ++ GE++H +K + +V S++ +Y G + +
Sbjct: 546 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 605
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++FDEMP V W I+ ++ +AV V R + PD T V L+AC +
Sbjct: 606 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFAN-GMRPDSFTAVRVLTACARI 664
Query: 204 KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+L G+ + R QE G A ++V T+ V
Sbjct: 665 ADLATGETVWRAAEQE-------GVA-----------------------QSVFVATAAVD 694
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
YV CG++ KAR++FD+ +D V W AM+ GY EA+ LF MQ +KPD +
Sbjct: 695 LYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 754
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ L+ C +LGAL+ G+ ++ + + V+ TALI+MYAKCG +A +F ++R
Sbjct: 755 VAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR 814
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+KD W ++I GL M G A L QM G K +D TFIG+L +C+H GL+ +GRR
Sbjct: 815 KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 874
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+F+ MT++Y I P++EHYGC++DLL RAGLL EA +L+ +P N +I+ GALL C
Sbjct: 875 YFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL---GALLGGC 931
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
+I+ N ++ E + L +E +S + +L+NIY++ RWED +R MK GV KVP
Sbjct: 932 KIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPA 991
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
CS +E G +HEF VGD SH +IY LD +
Sbjct: 992 CSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDEL 1024
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 190/414 (45%), Gaps = 43/414 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A+ ++ NP L L+ + G L A+++F + P + + LI A+
Sbjct: 570 EQLHARSLKLPSHTNPHVLTSLLSL--YAKCGLLHRAQRVFDEMPHPSTVPWTALITAYM 627
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G R+++ + G+ PD+FT V A + ++ GE V + G+ +
Sbjct: 628 DAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVF 687
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V + +D+Y G++ +++FD+M KD V+W + G+ +A+D+F M Q
Sbjct: 688 VATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM-QAE 746
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMYCKCGCLSE 242
+ PD V LSACT L L+LG++ R ++ + EF P++G AL+DMY KCG E
Sbjct: 747 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWD-EFLDNPVLGTALIDMYAKCGSTVE 805
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F +M K++I W +M+ G G EK
Sbjct: 806 AWVVFQQMRKKDIIVWNAMILGLGMTGH-EKI---------------------------- 836
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATA 361
A AL +M+ +K + + LL C G ++ G ++ H I+
Sbjct: 837 --AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 894
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG-KINKALELFSQMI 414
++++ ++ GL+++A ++L + ++I G + G KI++ EL ++
Sbjct: 895 MVDLLSRAGLLQEA----HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVL 944
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 277/513 (53%), Gaps = 35/513 (6%)
Query: 85 SPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
+P + T P K+ L ++ GE++H +K + +V S++ +Y G + +
Sbjct: 67 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 126
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++FDEMP V W I+ ++ +AV V R + PD T V L+AC +
Sbjct: 127 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFAN-GMRPDSFTAVRVLTACARI 185
Query: 204 KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+L G+ + R QE G A ++V T+ V
Sbjct: 186 ADLATGETVWRAAEQE-------GVA-----------------------QSVFVATAAVD 215
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
YV CG++ KAR++FD+ +D V W AM+ GY EA+ LF MQ +KPD +
Sbjct: 216 LYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYA 275
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+ L+ C +LGAL+ G+ ++ + + V+ TALI+MYAKCG +A +F ++R
Sbjct: 276 VAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR 335
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+KD W ++I GL M G A L QM G K +D TFIG+L +C+H GL+ +GRR
Sbjct: 336 KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 395
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+F+ MT++Y I P++EHYGC++DLL RAGLL EA +L+ +P N +I+ GALL C
Sbjct: 396 YFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL---GALLGGC 452
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
+I+ N ++ E + L +E +S + +L+NIY++ RWED +R MK GV KVP
Sbjct: 453 KIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPA 512
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
CS +E G +HEF VGD SH +IY LD +
Sbjct: 513 CSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDEL 545
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 190/414 (45%), Gaps = 43/414 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A+ ++ NP L L+ + G L A+++F + P + + LI A+
Sbjct: 91 EQLHARSLKLPSHTNPHVLTSLLSL--YAKCGLLHRAQRVFDEMPHPSTVPWTALITAYM 148
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G R+++ + G+ PD+FT V A + ++ GE V + G+ +
Sbjct: 149 DAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVF 208
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V + +D+Y G++ +++FD+M KD V+W + G+ +A+D+F M Q
Sbjct: 209 VATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM-QAE 267
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMYCKCGCLSE 242
+ PD V LSACT L L+LG++ R ++ + EF P++G AL+DMY KCG E
Sbjct: 268 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWD-EFLDNPVLGTALIDMYAKCGSTVE 326
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F +M K++I W +M+ G G EK
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGH-EKI---------------------------- 357
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATA 361
A AL +M+ +K + + LL C G ++ G ++ H I+
Sbjct: 358 --AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 415
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG-KINKALELFSQMI 414
++++ ++ GL+++A ++L + ++I G + G KI++ EL ++
Sbjct: 416 MVDLLSRAGLLQEA----HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVL 465
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 198/596 (33%), Positives = 315/596 (52%), Gaps = 71/596 (11%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVG 99
A +F + + L I A++G + + F+++ G +P+ F V +
Sbjct: 64 ARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCA 123
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK--------------- 144
+G+V+ G++VHG++++ G+ D +CN+++DMY G+ ++
Sbjct: 124 GMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNI 183
Query: 145 ----------------LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
LFDE P +D SWN ISG ++ DA+ RRM Q ++
Sbjct: 184 AIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQA-GVVF 242
Query: 189 DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
+ T + L +LG+++H R + LE + ++L+DMYCKC
Sbjct: 243 NHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKC---------- 292
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR-SPV-RDI-VLWTAMINGYVQFNRFDE 304
G LE A +FD SP+ RD+ W+ M+ GYVQ R +E
Sbjct: 293 ---------------------GLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEE 331
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
A+ LFR M + D+F L ++ CA +G +EQG+ +HG + + +DA +A+A+++
Sbjct: 332 ALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVD 391
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MYAKCG +E A IF K+ A WTS++C A +G+ A+ELF +M + P++IT
Sbjct: 392 MYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEIT 451
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
+GVLSACSH GLV EG +F M E Y I P +EHY C++DL GR+GLLD+A+ I +
Sbjct: 452 LVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEE- 510
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
N N+E IV + LLSACR++ + + + + L ++E D+ + +L+NIYA+ N+W
Sbjct: 511 NNINHEAIV--WKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWH 568
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
D +R M+E VRK PG S I + +H F+ GD SH + EIY+ L+++ + L
Sbjct: 569 DTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERL 624
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 193/409 (47%), Gaps = 13/409 (3%)
Query: 85 SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK 144
SP T+PF + +G G ++ L + S++ + + + +
Sbjct: 13 SPRASTHPFS------AALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARG 66
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+FDE P + W ++ISG + R+ D + F M P+ + + + C +
Sbjct: 67 VFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMG 126
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
++E GK +H + + + ++ NA+LDMY KCG AR +F M ++ + W +
Sbjct: 127 DVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIG 186
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
+ G + + LFD SP+RD W +I+G ++ +A++ R M + + +
Sbjct: 187 ACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYT 246
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF---Y 380
L + G+ +HG + + DA V ++L++MY KCGL+E A +F
Sbjct: 247 YSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWS 306
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
L +W++++ G NG+ +AL+LF +M+ G D T V +AC++ G+V++
Sbjct: 307 PLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQ 366
Query: 441 GRRFFNTMTEV-YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
GR+ + ++ Y++ L ++D+ + G L++A + + +N
Sbjct: 367 GRQVHGCVEKLWYKLDAPLA--SAIVDMYAKCGNLEDARSIFDRACTKN 413
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 173/352 (49%), Gaps = 45/352 (12%)
Query: 36 GNLLYAEKIFGSIQ----SPC--LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNF 89
G + + I GS+Q SP ++N +I + G +L ++ + GV +++
Sbjct: 186 GACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHY 245
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
TY F G L G ++HG V+ LE D +V +S+MDMY G + +FD
Sbjct: 246 TYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHW 305
Query: 150 P--DKDV-VSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKN 205
+D+ +W+ ++G+V+ R E+A+D+FRRM R+G + D T+ S +AC +
Sbjct: 306 SPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREG--VAADRFTLTSVAAACANVGM 363
Query: 206 LELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+E G+++H + + + + +A++DMY KCG L +AR +FD KN+ WTSM+
Sbjct: 364 VEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCS 423
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
Y + GQ A +LF+R M ++ P++ L
Sbjct: 424 YASHGQGRIAIELFER-------------------------------MTAEKMTPNEITL 452
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKA 375
V +L+ C+ +G + +G+ + E V ++ ++++Y + GL++KA
Sbjct: 453 VGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKA 504
>gi|302816163|ref|XP_002989761.1| hypothetical protein SELMODRAFT_20442 [Selaginella moellendorffii]
gi|300142538|gb|EFJ09238.1| hypothetical protein SELMODRAFT_20442 [Selaginella moellendorffii]
Length = 749
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 324/577 (56%), Gaps = 26/577 (4%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L++ + IF+ G + ET + ++ + G+L+ A K+F P + ++N+++ A
Sbjct: 182 HLEEAEELIFKTG--HDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAA 239
Query: 63 FAKKGSFRKSLLLFSKLRERG--VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A G ++L+L ++++ G V PD TY + A LG +++G +H V+ +G+E
Sbjct: 240 YAHNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHASVIVSGME 299
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+ V +I++MYG G + + K +FD+MP KDV+ WN IS + + A+D++ RM
Sbjct: 300 SNVVVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSMISAYALNGLGKSALDLYARM 359
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGC 239
R C + PD GT V+ L AC+ L +LE GK+IH I+ +LE+ ++ AL+ MY KCGC
Sbjct: 360 RHSC-VRPDAGTFVAALDACSVLNSLEDGKKIHAAISASKLEWNVMVATALVSMYGKCGC 418
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR--SPVRDIVLWTAMINGYV 297
L + +F M +N+I WT+M+ + G+ A +LF R R+ +LW A+I Y
Sbjct: 419 LERSIAVFRAMEVRNLISWTAMLGALAHNGRDAAALELFARMRDEGREALLWNALIAAYT 478
Query: 298 QFNRFDEAVALFREMQIIR------LKPDKFILVALLTGCAQLG--ALEQGKWIHGYINE 349
EA+ L+ EM + ++PD+ A+L C +G AL +G+ IH
Sbjct: 479 ARGHPREALRLYAEMILAERRGAPPVRPDRNTFAAVLEACGSIGTAALGEGRMIHTQAIA 538
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALE 408
D +VA+ALI MY+KCG + A+ IF EL R++ T++I +GK+ ALE
Sbjct: 539 RACDTDVIVASALIAMYSKCGSLGDAVAIFRELSRKRSVVLVTTMIAAYGHHGKLELALE 598
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +M G KP+ ITF+ +LS+CS + E +F M IQP EHY +IDLL
Sbjct: 599 LFWEMAQRGLKPNRITFVSLLSSCSAANSLREAVFYFQIMIHDCDIQPGAEHYHFVIDLL 658
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGA---LLSACRIYGNVDMGEKLAALLEKIESK 525
GR+G + +AEELI +P P GA LL+AC + V++G + A + ++E K
Sbjct: 659 GRSGKVAQAEELINSMP------FAPGCGAWMSLLAACERHSKVELGRRAADRVFEMEPK 712
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP 562
++ + +L IY +A W+++ +++ M++ G+++ P
Sbjct: 713 NALAYLMLGKIYVAAGMWDELLQLKKLMEDRGLKREP 749
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/551 (25%), Positives = 249/551 (45%), Gaps = 107/551 (19%)
Query: 18 QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFS 77
++P + ++ ++ S G L A KIF ++ ++++N ++ A A++G F ++ + +
Sbjct: 62 EHPNVFSFNILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRAKIFLA 121
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKKG------------------------------ 107
++ + + PD T+ + LG V +G
Sbjct: 122 RIPQHSL-PDGITFVTILTGCSHLGLVSRGREFFRSIESAFGMKPGVEHYCCMVDVLGRA 180
Query: 108 ---EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
E+ + KTG + +T + N ++ MYG G + + +K+FD PD ++ SWN+ ++ +
Sbjct: 181 KHLEEAEELIFKTGHDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAY 240
Query: 165 VKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
+A+ + +RM+ G ++PD T V L AC+ L L G+ IH I +E
Sbjct: 241 AHNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHASVIVSGMES 300
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
++ A+++MY KCG + +A+ +FD+MP K+VICW SM+S Y G + A DL+ R
Sbjct: 301 NVVVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSMISAYALNGLGKSALDLYAR-- 358
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
M+ ++PD VA L C+ L +LE GK
Sbjct: 359 -----------------------------MRHSCVRPDAGTFVAALDACSVLNSLEDGKK 389
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH I+ +++ + +VATAL+ MY KCG +E+++ +F + ++ SWT+++ LA NG+
Sbjct: 390 IHAAISASKLEWNVMVATALVSMYGKCGCLERSIAVFRAMEVRNLISWTAMLGALAHNGR 449
Query: 403 INKALELFSQMISGG---------------------------------------AKPDDI 423
ALELF++M G +PD
Sbjct: 450 DAAALELFARMRDEGREALLWNALIAAYTARGHPREALRLYAEMILAERRGAPPVRPDRN 509
Query: 424 TFIGVLSACSHGGLVDEGR-RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
TF VL AC G G R +T + LI + + G L +A + R
Sbjct: 510 TFAAVLEACGSIGTAALGEGRMIHTQAIARACDTDVIVASALIAMYSKCGSLGDAVAIFR 569
Query: 483 KIPNENNEIIV 493
++ + + ++V
Sbjct: 570 ELSRKRSVVLV 580
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 207/444 (46%), Gaps = 41/444 (9%)
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEF--DTYVCNSIMDMYGVLGKICNVKKLFDE--- 148
+ ++ G G++ G ++H V+ + D ++ N ++DMYG G + + +FD
Sbjct: 4 LLRSCGNSGDLSAGRRIHKRVLDLQRQHGQDVFLLNLVIDMYGKCGGLGEARAVFDAIEH 63
Query: 149 ----------------------------MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
MP ++VVSWN +S + + F A R+
Sbjct: 64 PNVFSFNILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRAKIFLARI 123
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCG 238
Q + +PD T V+ L+ C+ L + G+E R I P + + ++D+ +
Sbjct: 124 PQ--HSLPDGITFVTILTGCSHLGLVSRGREFFRSIESAFGMKPGVEHYCCMVDVLGRAK 181
Query: 239 CLSEAREL-FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
L EA EL F ++ ++ Y CG L AR +FDR+P +I W M+ Y
Sbjct: 182 HLEEAEELIFKTGHDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAYA 241
Query: 298 QFNRFDEAVALFREMQI--IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+EA+ L + M+ + PD+ V LL C+ LGAL +G+ IH + + + +
Sbjct: 242 HNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHASVIVSGMESN 301
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
VVATA++ MY KCG + A +F ++ KD W S+I A+NG AL+L+++M
Sbjct: 302 VVVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSMISAYALNGLGKSALDLYARMRH 361
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
+PD TF+ L ACS +++G++ ++ +++ + L+ + G+ G L+
Sbjct: 362 SCVRPDAGTFVAALDACSVLNSLEDGKKIHAAIS-ASKLEWNVMVATALVSMYGKCGCLE 420
Query: 476 EAEELIRKIPNENNEIIVPLYGAL 499
+ + R + N + GAL
Sbjct: 421 RSIAVFRAMEVRNLISWTAMLGAL 444
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 44/349 (12%)
Query: 197 LSACTALKNLELGKEIHRYI---NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
L +C +L G+ IH+ + ++ + N ++DMY KCG L EAR +FD + +
Sbjct: 5 LRSCGNSGDLSAGRRIHKRVLDLQRQHGQDVFLLNLVIDMYGKCGGLGEARAVFDAIEHP 64
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
NV + +++ Y + G LE+A +F P R++V W M++ Q F A +
Sbjct: 65 NVFSFNILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRAKIFLARIP 124
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN---------ENRITVDAVVATA--- 361
L PD V +LTGC+ LG + +G+ I E+ + V+ A
Sbjct: 125 QHSL-PDGITFVTILTGCSHLGLVSRGREFFRSIESAFGMKPGVEHYCCMVDVLGRAKHL 183
Query: 362 ---------------------LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
LI+MY +CG + A ++F + + SW ++ A N
Sbjct: 184 EEAEELIFKTGHDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAYAHN 243
Query: 401 GKINKALELFSQMISGGAK--PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
G N+AL L +M GA PD +T++ +L ACS+ G + EGR ++ V ++ +
Sbjct: 244 GHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHASVI-VSGMESNV 302
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
++++ G+ G + +A+ + K+P ++ V + +++SA + G
Sbjct: 303 VVATAIVNMYGKCGSMGDAKMVFDKMPAKD----VICWNSMISAYALNG 347
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 182/471 (38%), Positives = 285/471 (60%), Gaps = 11/471 (2%)
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y GKI + LF + D D+ + +I+ +D + + P+E T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 193 VVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
S L +C+ + GK IH ++ + L P + L+D+Y K G + A+++FD MP
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
++++ T+M++ Y G +E AR LFD RDIV W MI+GY Q ++A+ LF++
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 312 MQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+ + KPD+ +VA L+ C+Q+GALE G+WIH ++ +RI ++ V T LI+MY+KCG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVL 429
+E+A+ +F + KD +W ++I G AM+G AL LF++M G +P DITFIG L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
AC+H GLV+EG R F +M + Y I+PK+EHYGCL+ LLGRAG L A E I+ + + +
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
+ L+ ++L +C+++G+ +G+++A L + K+S + LL+NIYAS +E V V
Sbjct: 429 SV---LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKV 485
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
R MKE G+ K PG S+IEI +HEF GD HS+ KEIY+ML ++++ +
Sbjct: 486 RNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERI 536
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 196/433 (45%), Gaps = 73/433 (16%)
Query: 6 QIQAQIFQIGLQQNPE--TLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
QI A I + L +P LN L + + SHG + ++ +F P L + I
Sbjct: 47 QIHAAILRHNLLLHPRYPVLN-LKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTA 105
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G ++ LL+ +L ++P+ FT+ + K+ K G+ +H +V+K GL D
Sbjct: 106 SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDP 161
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDK------------------------------- 152
YV ++D+Y G + + +K+FD MP++
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
D+VSWNV I G+ + DA+ +F+++ PDE TVV+ LSAC+ + LE G+ I
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 213 HRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H ++ + + + L+DMY KCG L EA +F++ P K+++ W +M++GY
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA----- 336
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTG 330
++GY Q +A+ LF EMQ I L+P + L
Sbjct: 337 ---------------------MHGYSQ-----DALRLFNEMQGITGLQPTDITFIGTLQA 370
Query: 331 CAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAA 388
CA G + +G I + E I L+ + + G +++A E + + D+
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSV 430
Query: 389 SWTSIICGLAMNG 401
W+S++ ++G
Sbjct: 431 LWSSVLGSCKLHG 443
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 32/258 (12%)
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ L YA G I +L +F++ + D +T+ I ++NG ++A L+ Q++S
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 124
Query: 417 GAKPDDITFIGVLSACS--HGGLVDEGRRFFNTMTEVYQIQPKLEHYGC--LIDLLGRAG 472
P++ TF +L +CS G L+ T V + ++ Y L+D+ + G
Sbjct: 125 EINPNEFTFSSLLKSCSTKSGKLIH---------THVLKFGLGIDPYVATGLVDVYAKGG 175
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
+ A+++ ++P + + A+++ GNV E AL + + +D +
Sbjct: 176 DVVSAQKVFDRMPERS----LVSSTAMITCYAKQGNV---EAARALFDSMCERDIVSWNV 228
Query: 533 LANIYASANRWEDVTNVRQKMKEMG---------VRKVPGCSSI---EINGIIHEFLVGD 580
+ + YA D + QK+ G V + CS I E IH F+
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 581 PSHSEMKEIYSMLDRMAK 598
+K ++D +K
Sbjct: 289 RIRLNVKVCTGLIDMYSK 306
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 177/464 (38%), Positives = 283/464 (60%), Gaps = 10/464 (2%)
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
++KL ++ + +VSW I+ + R +AV F MR + P+ T ++ LSAC
Sbjct: 10 IQKL-NQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLA-GIEPNHITFIALLSACG 67
Query: 202 ALKNLE--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVIC 257
+ LG +H Y + LE + +M G A+L MY K G L +AR +FD + +KN +
Sbjct: 68 NFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVT 127
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W +M+ GY+ GQ++ A D+FD+ P RD++ WTAMI G+V+ +EA+A FREMQI +
Sbjct: 128 WNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGV 187
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
PD +++ + C LGAL G W+H Y+ + V+ +LI++Y +CG +E A +
Sbjct: 188 NPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQ 247
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F ++ ++ SW S+I G A NG N++L F +M G PD +TF G L+ACSH GL
Sbjct: 248 VFDKMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGL 307
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
V+EG ++F M Y+I P++EHYGCL+DL RAG L++A ++ +P + NE+++ G
Sbjct: 308 VEEGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVI---G 364
Query: 498 ALLSACRIYGN-VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
+LL+ACR +GN + E+L + ++ K S + +L+N+YA+ +WE + +R+KMK +
Sbjct: 365 SLLAACRNHGNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGL 424
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
G++K PG SSIEI+ H F+ GD +H E I +L+ ++ L
Sbjct: 425 GLKKQPGYSSIEIDDCTHVFMAGDSAHVETAYIREVLELISSDL 468
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 169/364 (46%), Gaps = 70/364 (19%)
Query: 50 SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL--GEVKKG 107
S ++++ I ++ G +++ FS +R G+ P++ T+ + A G G G
Sbjct: 18 SETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLG 77
Query: 108 EKVHGYVVKTGLE--------------------------FD------TYVCNSIMDMYGV 135
+HGY K GLE FD + N+++D Y
Sbjct: 78 YLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMR 137
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVV 194
G++ N +FD+MPD+D++SW I+G VK E+A+ FR M+ G N PD ++
Sbjct: 138 NGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVN--PDYVAII 195
Query: 195 STLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
S ++ACT L L G +HRY+ +Q+ + N+L+D+YC+CGC+ AR++FD+M +
Sbjct: 196 SAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKR 255
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
V+ W S++ G+ G +E++ FR+MQ
Sbjct: 256 TVVSWNSVIVGFAANGNA-------------------------------NESLVYFRKMQ 284
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLI 372
PD LT C+ +G +E+G ++ ++ RI+ L+++Y++ G +
Sbjct: 285 REGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRL 344
Query: 373 EKAL 376
E A
Sbjct: 345 EDAF 348
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G + A +F + L+++ +I F KKG ++L F +++ GV+PD
Sbjct: 138 NGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISA 197
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + G VH YV+ + V NS++D+Y G + +++FD+M + V
Sbjct: 198 VAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTV 257
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
VSWN I G +++ FR+M R+G PD T L+AC+ + +E G +
Sbjct: 258 VSWNSVIVGFAANGNANESLVYFRKMQREG--FTPDGVTFTGALTACSHVGLVEEGFQYF 315
Query: 214 RYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQ 270
+ + + +P + + L+D+Y + G L +A + + MP K N + S+++ N G
Sbjct: 316 QMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGN 375
Query: 271 ----LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
E+ V+ + + N Y +++ A + R+M+ + LK
Sbjct: 376 HTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 427
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/458 (37%), Positives = 279/458 (60%), Gaps = 26/458 (5%)
Query: 157 WNV---SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
WN+ +I +V + + V+ RMR + PD T L + +L LG+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNH-RVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
I L+ P + +LL+MY CG L A+ +FD+ +K++ W S+V+ Y G ++
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-----LKPDKFILVAL 327
AR LFD P R+++ W+ +INGYV ++ EA+ LFREMQ+ + ++P++F + +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKD 386
L+ C +LGALEQGKW+H YI++ + +D V+ TALI+MYAKCG +E+A +F L +KD
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 387 AASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+++++IC LAM G ++ +LFS+M S P+ +TF+G+L AC H GL++EG+ +F
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
M E + I P ++HYGC++DL GR+GL+ EAE I +P E + +I +G+LLS R+
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI---WGSLLSGSRM 382
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
G++ E L +++ +S + LL+N+YA RW + G+ KVPGCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME-----------GINKVPGCS 431
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+E+ G++HEF+VGD S E + IY+MLD + + L ++
Sbjct: 432 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREA 469
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 180/390 (46%), Gaps = 72/390 (18%)
Query: 56 YNLLIKAFAKKGSF---RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+N++I+A S + ++ ++R VSPD T+PF+ + + G++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGK-------------------------------ICN 141
++ GL+ D +V S+++MY G I +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR----QGCNLMPDEGTVVSTL 197
+KLFDEMP+++V+SW+ I+G+V C ++++A+D+FR M+ + P+E T+ + L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 198 SACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
SAC L LE GK +H YI++ +E ++G AL+DMY KCG L A+ +F+ + +K
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK--- 263
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII- 315
+D+ ++AMI + DE LF EM
Sbjct: 264 ---------------------------KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 316 RLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ P+ V +L C G + +GK + I E IT ++++Y + GLI++
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 375 ALEIFYELR-EKDAASWTSIICGLAMNGKI 403
A + E D W S++ G M G I
Sbjct: 357 AESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 42/316 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++ AQI GL ++P L+ + S G+L A+++F S L A+N ++ A+A
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNM--YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 65 KKGSFRKSLLLFSKLRERG------------------------------------VSPDN 88
K G + LF ++ ER V P+
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 89 FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
FT V A G LG +++G+ VH Y+ K +E D + +++DMY G + K++F+
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 149 M-PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+ KDV +++ I ++ +F M N+ P+ T V L AC +
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 208 LGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
GK + + +E TP + + ++D+Y + G + EA MP +V+ W S++SG
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 265 YVNCGQLEKARDLFDR 280
G ++ R
Sbjct: 380 SRMLGDIKTCEGALKR 395
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 339/668 (50%), Gaps = 80/668 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLA-------- 55
+ + I G Q LN+L+ V+C L YA ++F I P +A
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYC---KSSELNYARQLFDEISEPDKIARTTMVSGY 90
Query: 56 -------------------------YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
YN +I F+ ++ LF K++ G PDNFT
Sbjct: 91 CASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFT 150
Query: 91 YPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK----ICNVKKL 145
+ V + + + K+ + H +K+G + T V N+++ +Y + + +K+
Sbjct: 151 FASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210
Query: 146 FDEMPDKDVVSW--------------------------------NVSISGHVKCMRFEDA 173
FDE+ +KD SW N ISG+V +++A
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 174 VDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD 232
+++ RRM G L DE T S + AC L+LGK++H Y+ + +F+ N+L+
Sbjct: 271 LEMVRRMVSSGIEL--DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVS 328
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
+Y KCG EAR +F++MP K+++ W +++SGYV+ G + +A+ +F ++I+ W M
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I+G + +E + LF M+ +P + + CA LGA G+ H + +
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF 448
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
ALI MYAKCG++E+A ++F + D+ SW ++I L +G +A++++ +
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M+ G +PD IT + VL+ACSH GLVD+GR++F++M VY+I P +HY LIDLL R+G
Sbjct: 509 MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSG 568
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
+AE +I +P + ++ ALLS CR++GN+++G A L + + + L
Sbjct: 569 KFSDAESVIESLPFKPT---AEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYML 625
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+N++A+ +WE+V VR+ M++ GV+K CS IE+ +H FLV D SH E + +Y
Sbjct: 626 LSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIY 685
Query: 593 LDRMAKTL 600
L + K +
Sbjct: 686 LQDLGKEM 693
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 169/359 (47%), Gaps = 50/359 (13%)
Query: 194 VSTLSACTALK--NLELGKEIHRYINQELEFTPIMG--NALLDMYCKCGCLSEARELFDE 249
+ L C L+ +L+L + +H I F P N L+D+YCK L+ AR+LFDE
Sbjct: 16 AANLRLCLPLRRTSLQLARAVHGNI-ITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RDIVLWTAMINGYVQFNRFDEAVA 307
+ + I T+MVSGY G + AR +F+++PV RD V++ AMI G+ N A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALE-QGKWIHGYINENRITVDAVVATALIEMY 366
LF +M+ KPD F ++L G A + E Q H ++ V+ AL+ +Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 367 AKCG----LIEKALEIFYELREKDAASWTSIICGLAMNGKIN------------------ 404
+KC L+ A ++F E+ EKD SWT+++ G NG +
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 405 --------------KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+ALE+ +M+S G + D+ T+ V+ AC+ GL+ G++ +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
++ L+ L + G DEA + K+P ++ + + ALLS G++
Sbjct: 315 REDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAKD----LVSWNALLSGYVSSGHI 367
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 222/697 (31%), Positives = 349/697 (50%), Gaps = 109/697 (15%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+QI A + G + T+ +V + G + K+F I +++N I A
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVN-MYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALC 170
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG---EVKKGEKVHGYVVKTGLEF 121
+ + ++L F ++ + +FT V A LG ++ G+++HGY ++ G +
Sbjct: 171 RFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQ 229
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
T+ N++M MY LG++ + K LF+ D+D+VSWN IS + RF +A+ FR M
Sbjct: 230 KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMV 289
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI---NQELE---------------- 221
+G L D T+ S L AC+ L+ L++GKEIH Y+ N +E
Sbjct: 290 LEGVEL--DGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR 347
Query: 222 --------FTPIMG------NALLDMYCKCGCLSEARELFDEM-------PNKNVICWTS 260
F I+G NA++ Y + G +A LF EM PN + S
Sbjct: 348 QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTM--AS 405
Query: 261 MVSGYVNC-----------------------------------GQLEKARDLFDRSPVRD 285
++ V+C G+++ + +FD VRD
Sbjct: 406 VMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRD 465
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIR-----------------LKPDKFILVALL 328
V W MI GYV R+ A+ L EMQ + KP+ L+ +L
Sbjct: 466 RVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVL 525
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
GCA L A+ +GK IH Y N + D V +AL++MYAKCG + + +F E+ K+
Sbjct: 526 PGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVI 585
Query: 389 SWTSIICGLAMNGKINKALELFSQMIS-----GGAKPDDITFIGVLSACSHGGLVDEGRR 443
+W +I M+GK +ALELF M++ G AKP+++TFI V +ACSH GL+ EG
Sbjct: 586 TWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLN 645
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
F M + ++P +HY C++DLLGRAG L+EA EL+ +P E ++ V + +LL AC
Sbjct: 646 LFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDK--VGAWSSLLGAC 703
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
RI+ NV++GE A L +E +S + LL+NIY+SA W VR+ M++MGV+K PG
Sbjct: 704 RIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPG 763
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
CS IE +H+F+ GD SH + ++++ L+ +++ +
Sbjct: 764 CSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKM 800
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 212/434 (48%), Gaps = 51/434 (11%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+++ + FR+++ + ++ G PDNF +P V KAV L ++K GE++H VK G
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 120 -EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
V N++++MYG G I +V K+FD + D+D VSWN I+ + ++E A++ FR
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFR 183
Query: 179 RMRQGCNLMPDEGTVVSTLSACTAL---KNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
M Q N+ T+VS AC+ L L LGK++H Y + + NAL+ MY
Sbjct: 184 AM-QMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYA 242
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G + +++ LF+ +++++ W +M+S
Sbjct: 243 KLGRVDDSKALFESFVDRDMVSWNTMIS-------------------------------S 271
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITV 354
+ Q +RF EA+A FR M + ++ D + ++L C+ L L+ GK IH Y+ N +
Sbjct: 272 FSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIE 331
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
++ V +AL++MY C +E +F + + W ++I G A NG KAL LF +MI
Sbjct: 332 NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMI 391
Query: 415 S-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL----EHY--GCLIDL 467
G P+ T V+ AC H F+ ++ KL + Y L+D+
Sbjct: 392 KVAGLLPNTTTMASVMPACVHC-------EAFSNKESIHGYAVKLGFKEDRYVQNALMDM 444
Query: 468 LGRAGLLDEAEELI 481
R G +D +E +
Sbjct: 445 YSRMGKMDISETIF 458
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
SP R W + + N F EA++ + EM + +PD F A+L + L L+ G
Sbjct: 52 SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 341 KWIHGY-INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
+ IH + + VA L+ MY KCG I ++F + ++D SW S I L
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLV 438
K +ALE F M + T + V ACS+ G++
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM 210
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 205/670 (30%), Positives = 348/670 (51%), Gaps = 83/670 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+QI + ++G+ + +N L+ + G + A ++F + L+++N +I F
Sbjct: 129 RQIHGHVLKLGVLDDVSVVNSLLTM--YWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQ 186
Query: 65 KKGSFRKSLLLF-SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
K + +SL+ F S + E G+ P+ + L + G ++HG VVK+GL+ +
Sbjct: 187 KSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEE 246
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS-----WNVSISGHVKCMRFEDAVDVFR 178
Y+ +S+++MY G I N + +F+ + DKD V WNV ISG+V F A+ +F
Sbjct: 247 YLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFI 306
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKC 237
+M + PD T+VS S C+ ++ GK+IH I + L+ + ALLDMY KC
Sbjct: 307 KMMVW-GIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKC 365
Query: 238 -------------------------------GCLSEARELFDEMPNKN------------ 254
GC ++A ELF E ++
Sbjct: 366 GDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVL 425
Query: 255 ---------------------------VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
V +++V Y C + ++ +F R +D+V
Sbjct: 426 RACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLV 485
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W A+I+GY Q DEA+ FR+MQ+ ++P+ + +L+ CA L + K +HGY+
Sbjct: 486 SWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYL 545
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ +V+ +LI YAKCG I +L F ++ E++ SW SII G+ M+ + ++ +
Sbjct: 546 IRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMI 605
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LF +M++ G KPD +TF +LSACSH G VDEG ++F +M E + ++P+LE Y C++DL
Sbjct: 606 VLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDL 665
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG L++A +LI +P ++ I +G+LL +C+ +G+ + E +A + K+
Sbjct: 666 LGRAGHLNQAYDLIMAMPCTPDDRI---WGSLLGSCKNHGDEILAEIVANHIFKLVPSSV 722
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ LLAN+Y + + + + VR ++K+MG++K PGCS IE++ H F+ GD SHS+
Sbjct: 723 GYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSD 782
Query: 588 EIYSMLDRMA 597
EIY+ ++ +
Sbjct: 783 EIYAAVESLT 792
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 208/402 (51%), Gaps = 38/402 (9%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY-PFVFKAVGWLGEVKKGEKVHGYVV 115
N +I+ + + G F ++ ++ K+ + GV + F Y P + KA G L +V KG ++HG+V+
Sbjct: 77 NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVL 136
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K G+ D V NS++ MY G + + ++F++MP+ D+VSWN ISG K M + ++
Sbjct: 137 KLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLM 196
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMY 234
FR M + P+ VS++ +C++L++L G+EIH + + L+ + ++L++MY
Sbjct: 197 FFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMY 256
Query: 235 CKCGCLSEARELFDEMPNK-----NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
KCG + A +F+ + +K N + W M+SGYV+ G
Sbjct: 257 MKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGC------------------- 297
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
F +A+ LF +M + +KPD +V+L + C++ + GK IHG I +
Sbjct: 298 ------------FSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFK 345
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
+ + V TAL++MY KCG + L+IF + + W+++I A +G KALEL
Sbjct: 346 FGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALEL 405
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
F + D + VL ACS L EG + T++
Sbjct: 406 FYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKM 447
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 99/202 (49%), Gaps = 7/202 (3%)
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKF-ILVALLTGCAQLGALEQGKWIHGYINEN 350
+I Y + FD+A+ ++ +M +K ++F L+ L + +G+ IHG++ +
Sbjct: 79 VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ D V +L+ MY KCG++E A+++F ++ E D SW ++I G + ++L F
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198
Query: 411 SQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDL 467
M+ G P+ + + + +CS + GR V + +E Y LI++
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGV---VVKSGLDVEEYLVSSLIEM 255
Query: 468 LGRAGLLDEAEELIRKIPNENN 489
+ G + AE + I ++++
Sbjct: 256 YMKCGSIKNAENIFNSILDKDS 277
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 276/459 (60%), Gaps = 9/459 (1%)
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
++ + VSW I+ + R +A F M + P+ T ++ LS C +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLA-GVEPNHITFIALLSGCGDFTSG 87
Query: 207 E--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
LG +H Y + L+ +M G A++ MY K G +AR +FD M +KN + W +M+
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
GY+ GQ++ A +FD+ P RD++ WTAMING+V+ +EA+ FREMQI +KPD
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
++A L C LGAL G W+H Y+ + V+ +LI++Y +CG +E A ++FY +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
++ SW S+I G A NG +++L F +M G KPD +TF G L+ACSH GLV+EG
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
R+F M Y+I P++EHYGCL+DL RAG L++A +L++ +P + NE+++ G+LL+A
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI---GSLLAA 384
Query: 503 CRIYG-NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
C +G N+ + E+L L + K S + +L+N+YA+ +WE + +R+KMK +G++K
Sbjct: 385 CSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ 444
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PG SSIEI+ +H F+ GD +H E I +L+ ++ L
Sbjct: 445 PGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDL 483
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 176/393 (44%), Gaps = 74/393 (18%)
Query: 31 THPSHGNLLYAEKIFGSIQSP--CLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDN 88
TH +H N KI QS +++ I + G ++ FS + GV P++
Sbjct: 16 THKNHAN----PKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNH 71
Query: 89 FTYPFVFKAVGWL--GEVKKGEKVHGYVVKTGLE-------------------------- 120
T+ + G G G+ +HGY K GL+
Sbjct: 72 ITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLV 131
Query: 121 FD------TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
FD + N+++D Y G++ N K+FD+MP++D++SW I+G VK E+A+
Sbjct: 132 FDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEAL 191
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDM 233
FR M Q + PD +++ L+ACT L L G +HRY+ +Q+ + + N+L+D+
Sbjct: 192 LWFREM-QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDL 250
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
YC+CGC+ AR++F M + V+ W S++ G+ G
Sbjct: 251 YCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAH--------------------- 289
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRI 352
E++ FR+MQ KPD LT C+ +G +E+G ++ + RI
Sbjct: 290 ----------ESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRI 339
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
+ L+++Y++ G +E AL++ + K
Sbjct: 340 SPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 138/294 (46%), Gaps = 16/294 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + L+++ +I F KKG ++LL F +++ GV PD
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G VH YV+ + + V NS++D+Y G + +++F M + VV
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G +++ FR+M++ PD T L+AC+ + +E G +
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEK-GFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQ-- 270
+ + +P + + L+D+Y + G L +A +L MP K N + S+++ N G
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 271 ------LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
++ DL +S ++L N Y +++ A + R+M+ + LK
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVIL----SNMYAADGKWEGASKMRRKMKGLGLK 442
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 313/559 (55%), Gaps = 41/559 (7%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ ++N +I A+ G ++LL FS +R+ + P ++P KA L ++ G++ H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
G + D +V ++++ MY GK+ + +K+FDE+P +D+VSW I G+ D
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALD 160
Query: 173 AVDVFRRMRQGCN-----LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIM 226
AV +F+ + N + D +VS +SAC+ + L + IH + I + + +
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 227 GNALLDMYCKC--GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
GN LLD Y K G ++ AR++FD++ +K+ + + S++S Y G +A ++F R
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR---- 276
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ N V FN L +L + GAL GK IH
Sbjct: 277 ------LVKNKVVTFN--------------------AITLSTVLLAVSHSGALRIGKCIH 310
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ + D +V T++I+MY KCG +E A + F ++ K+ SWT++I G M+G
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
KALELF MI G +P+ ITF+ VL+ACSH GL EG R+FN M + ++P LEHYGC+
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCM 430
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAG L +A +LI+++ + + II + +LL+ACRI+ NV++ E A L +++S
Sbjct: 431 VDLLGRAGFLQKAYDLIQRMKMKPDSII---WSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+ ++ LL++IYA A RW+DV VR MK G+ K PG S +E+NG +H FL+GD H
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 585 EMKEIYSMLDRMAKTLLDS 603
+ ++IY L + + LL++
Sbjct: 548 QREKIYEFLAELNRKLLEA 566
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 11/267 (4%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ I + + + G + N L+ G + A KIF I ++YN ++ +A
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 65 KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G ++ +F +L + + V+ + T V AV G ++ G+ +H V++ GLE D
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V SI+DMY G++ +K FD M +K+V SW I+G+ A+++F M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ---ELEFTPIMGN--ALLDMYCKCG 238
+ P+ T VS L+AC+ + L E R+ N P + + ++D+ + G
Sbjct: 383 -GVRPNYITFVSVLAACS---HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 239 CLSEARELFDEMPNK-NVICWTSMVSG 264
L +A +L M K + I W+S+++
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 200/597 (33%), Positives = 328/597 (54%), Gaps = 14/597 (2%)
Query: 16 LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLL 75
L N + + + T + G+L A +F I P L + +LI + G +K++ +
Sbjct: 5 LPANLQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDI 64
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV 135
+S L R V PD F V KA G++ +K+H ++ G D + N+++DM+G
Sbjct: 65 YSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGK 124
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN-LMPDEGTVV 194
+ + +FD+M KDVVSW +V C + +FR M G N + + TV
Sbjct: 125 CKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREM--GLNGIRANSLTVS 182
Query: 195 STLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
S L AC ++LG+E+H +I E+E + +AL++MY L +AR +FD M ++
Sbjct: 183 SILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHR 240
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL----WTAMINGYVQFNRFDEAVALF 309
+++ W M++ Y + E+ LF + I L W A I+G +Q + + A+ +
Sbjct: 241 DIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGIL 300
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
+MQ +KP++ +V+ L GC L +L GK IHGY+ + D + TAL+ +YAKC
Sbjct: 301 CKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKC 360
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
G +E + +F + KD +W ++I +M+GK ++L LF++M+ G +P+ +TFIGVL
Sbjct: 361 GDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVL 420
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
S CSH L DEG FN+M+ + I P +HY C++D+L RAG L+EA + IRK+P E
Sbjct: 421 SGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPT 480
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
ALL ACR+Y NV++G A+ L +IE ++ + LL+NI +A +W + + +
Sbjct: 481 AAAWG---ALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEI 537
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM-AKTLLDSKQ 605
R+ M++ G+ K PG S +++ ++ F+ GD S+ + IY LD + K LD Q
Sbjct: 538 RKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQ 594
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/565 (33%), Positives = 311/565 (55%), Gaps = 51/565 (9%)
Query: 78 KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
++R+ G D FT+P V +A ++G G+ +HG+V++ G + +V N ++ MY LG
Sbjct: 32 RMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLG 91
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM----------------- 180
++ + + LFD M + +SWN +S + A+++F+RM
Sbjct: 92 RMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLIS 151
Query: 181 ---RQGCN--------LMPDEGTVVS------TLSACTALKNLELGKEIHRY-INQELEF 222
R G + LM +G VS +S C L K IH Y + E
Sbjct: 152 SYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEE 211
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG----------QLE 272
+ +AL+ +Y K G ++ A LF EM NK++ W ++++ + G QLE
Sbjct: 212 YSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLE 271
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
++ D P ++V W+A+I+G+ R EA+ LFR MQ ++ + + +L+ CA
Sbjct: 272 RSGDCPRLRP--NVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCA 329
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
+L AL G+ IHG++ + + +V L+ MYAKCG +++ IF + KD SW S
Sbjct: 330 ELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNS 389
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
+I G M+G ALE F QMI G KPD +TF+ VLS+CSH GLV EGRR F+ M + Y
Sbjct: 390 MITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKY 449
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
+I+P++EHY C++DLLGRAGLL EA E+++ +P N + +GALL++CR++ N ++
Sbjct: 450 RIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACV---WGALLNSCRMHNNTEIA 506
Query: 513 EKLAALLEKIESKDSS-FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
E+ A+ L + ++++ + LL+NIYA++ RWED VR K G++K PG S I++
Sbjct: 507 EETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEK 566
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRM 596
++ F G+ ++I+ +L+ +
Sbjct: 567 NVYTFSAGNNMQRGFEQIFEILEEL 591
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 190/434 (43%), Gaps = 82/434 (18%)
Query: 41 AEKIFGSIQS----PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
A +IF ++S P L+ + LI ++A+ G +++ LF +R +GV V
Sbjct: 127 ALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVIS 186
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
LG + + +H Y VK G E ++V ++++ +YG G + LF EM +K + S
Sbjct: 187 ICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLAS 246
Query: 157 WNVSISGHVK-------------------CMRF--------------------EDAVDVF 177
WN I+ H + C R ++A+++F
Sbjct: 247 WNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELF 306
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM-GNALLDMYCK 236
RRM Q ++ + T+ + LS C L L LG+EIH ++ + + I+ GN L++MY K
Sbjct: 307 RRM-QHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAK 365
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CGCL E +F++ K++I W SM++GY G A + FD
Sbjct: 366 CGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFD----------------- 408
Query: 297 VQFNRFDEAVALFREMQIIRL--KPDKFILVALLTGCAQLGALEQGKWIHG-YINENRIT 353
Q+I+L KPD VA+L+ C+ G + +G+ + + + RI
Sbjct: 409 ----------------QMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIE 452
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQ 412
++++ + GL+ +A EI + +A W +++ M+ A E S
Sbjct: 453 PQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETASH 512
Query: 413 MISGGAKPDDITFI 426
+ + + T++
Sbjct: 513 LFNLSHRETTGTYM 526
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 141/281 (50%), Gaps = 12/281 (4%)
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM--GNALLDMYC 235
RRMR+ + D T + AC + + LGK IH ++ E+ F + GN L+ MY
Sbjct: 31 RRMRK-IGTLGDGFTFPLVIRACAYMGSFILGKTIHGHV-LEMGFQSHLHVGNELIGMYA 88
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR----DIVLWTA 291
K G + +AR LFD M ++ I W +MVS Y A ++F R ++V WT+
Sbjct: 89 KLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTS 148
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
+I+ Y + +EA+ LF M++ ++ L +++ CA LGA + K IH Y +
Sbjct: 149 LISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGG 208
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ V +ALI +Y K G + A +F E++ K ASW ++I A G ++ALE+FS
Sbjct: 209 FEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFS 268
Query: 412 QMISGG----AKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
Q+ G +P+ +++ ++ + G E F M
Sbjct: 269 QLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRM 309
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 285/495 (57%), Gaps = 60/495 (12%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
++ H +++ GL D D G + K C + K SG+++
Sbjct: 37 KQYHSQIIRLGLSADN-------DAMGRVIKFCAISK-----------------SGYLRW 72
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG 227
+ + ++ RM ++ P++ T + AC +E GK+IH ++
Sbjct: 73 QLARNCIFMYSRMLHK-SVSPNKFTYPPLIRACCIDYAIEEGKQIHAHV----------- 120
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD-- 285
K G ++ L +++ YVN LE+AR +FD P RD
Sbjct: 121 -------LKFGFGADGFSL------------NNLIHMYVNFQSLEQARRVFDNMPQRDRN 161
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
V W AMI YVQ NR EA ALF M++ + DKF+ ++L+ C LGALEQGKWIHG
Sbjct: 162 SVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHG 221
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
YI ++ I +D+ +AT +I+MY KCG +EKA E+F EL +K +SW +I GLAM+GK
Sbjct: 222 YIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEA 281
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A+ELF +M PD ITF+ VLSAC+H GLV+EG+ +F MTEV ++P +EH+GC++
Sbjct: 282 AIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMV 341
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DLLGRAGLL+EA +LI ++P + ++ GAL+ ACRI+GN ++GE++ + ++E
Sbjct: 342 DLLGRAGLLEEARKLINEMPVNPDAGVL---GALVGACRIHGNTELGEQIGKKVIELEPH 398
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSE 585
+S + LLAN+YASA RWEDV VR+ M + GV+K PG S IE + EF+ G +H +
Sbjct: 399 NSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQ 458
Query: 586 MKEIYSMLDRMAKTL 600
KEIY+ LD + +T+
Sbjct: 459 AKEIYAKLDEILETI 473
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 62/386 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LKQ +QI ++GL + + + +++ FC G L + LA
Sbjct: 33 MAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGYLRWQ------------LA----- 75
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
R + ++S++ + VSP+ FTYP + +A +++G+++H +V+K G
Sbjct: 76 ---------RNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMRFEDAVDVFR 178
D + N+++ MY + +++FD MP D++ VSWN I+ +V+ R +A +F
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKC 237
RMR N++ D+ S LSACT L LE GK IH YI + +E + ++DMYCKC
Sbjct: 187 RMRLE-NVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKC 245
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
GCL +A E+F+E+P K + W M+ G G+ E
Sbjct: 246 GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEA------------------------ 281
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDA 356
A+ LF+EM+ + PD V +L+ CA G +E+GK Y+ E +
Sbjct: 282 -------AIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGM 334
Query: 357 VVATALIEMYAKCGLIEKALEIFYEL 382
++++ + GL+E+A ++ E+
Sbjct: 335 EHFGCMVDLLGRAGLLEEARKLINEM 360
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 135/251 (53%), Gaps = 7/251 (2%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYNLLIKA 62
KQI A + + G + +LN L+ + + +L A ++F ++ + +++N +I A
Sbjct: 114 KQIHAHVLKFGFGADGFSLNNLIHM--YVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAA 171
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ + ++ LF ++R V D F + A LG +++G+ +HGY+ K+G+E D
Sbjct: 172 YVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD 231
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+ + +++DMY G + ++F+E+P K + SWN I G + E A+++F+ M +
Sbjct: 232 SKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMER 291
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCL 240
+ PD T V+ LSAC +E GK +Y+ + L P M + ++D+ + G L
Sbjct: 292 EM-VAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLL 350
Query: 241 SEARELFDEMP 251
EAR+L +EMP
Sbjct: 351 EEARKLINEMP 361
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/608 (31%), Positives = 316/608 (51%), Gaps = 40/608 (6%)
Query: 17 QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLF 76
++N T N L+ + G L A +F + +++ +++ + G F ++ F
Sbjct: 94 RRNAFTWNSLLSM--YAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTF 151
Query: 77 SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL 136
+ G++P F V + G KVH +V+K GL V NS++ MYG
Sbjct: 152 LDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKC 211
Query: 137 GKICNVK-------------------------------KLFDEMPDKDVVSWNVSISGHV 165
G + +F+ M ++ +VSWN I+G+
Sbjct: 212 GDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYN 271
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
+ + A+ F RM ++ PDE TV S LSAC L+ L++GK++H YI + ++
Sbjct: 272 QNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSS 331
Query: 225 IMGNALLDMYCKCGCLSEARELFDE--MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ Y K G + AR + D+ + + NVI +T+++ GYV G ++AR++FD
Sbjct: 332 QIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMN 391
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RD++ WTAMI GY Q + DEA+ LFR M +P+ L A+L+ CA L L GK
Sbjct: 392 NRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQ 451
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNG 401
IH + V+ A+I +YA+ G + A +F ++ K+ +WTS+I LA +G
Sbjct: 452 IHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG 511
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+A+ LF +M+ G KPD +T+IGV SAC+H G +D+G+R++ M + I P++ HY
Sbjct: 512 LGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHY 571
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++DLL RAGLL EA E I+++P + ++ +G+LL+ACR+ N D+ E A L
Sbjct: 572 ACMVDLLARAGLLTEAHEFIQRMPVAPDTVV---WGSLLAACRVRKNADLAELAAEKLLS 628
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
I+ +S ++ LAN+Y++ RW D + + K+ V+K G S + +H F D
Sbjct: 629 IDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDV 688
Query: 582 SHSEMKEI 589
H + I
Sbjct: 689 LHPQRDAI 696
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 223/488 (45%), Gaps = 80/488 (16%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNS-------------------------------------I 129
G +H + VK GL Y+CN+ +
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+ MY G++ + + +F +MP++D VSW V + G + RF DAV F M G L P
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM-VGEGLAPS 162
Query: 190 EGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
+ + + LS+C A + +G+++H + I L + N++L MY KCG AR +F+
Sbjct: 163 QFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 222
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
M ++ W +MVS Y + G+++ A +F+ R IV W A+I GY Q D A+
Sbjct: 223 RMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKF 282
Query: 309 F-REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-------------------- 347
F R + ++PD+F + ++L+ CA L L+ GK +H YI
Sbjct: 283 FSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYA 342
Query: 348 ------NENRITVDAVVA-------TALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
RI AVVA TAL+E Y K G ++A E+F + +D +WT++I
Sbjct: 343 KSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMI 402
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
G NG+ ++A+ELF MI G +P+ T VLSAC+ + G++ Q
Sbjct: 403 VGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQE 462
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
Q + +I + R+G + A + +I + + +++ A +G +GE+
Sbjct: 463 Q-SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT---WTSMIVALAQHG---LGEQ 515
Query: 515 LAALLEKI 522
L E++
Sbjct: 516 AIVLFEEM 523
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 40/318 (12%)
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG----CLSEARELFDEMP--NKNVIC 257
N G+ IH + + L + + N LL Y + G C EAR LFD++P +N
Sbjct: 40 NPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFT 99
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W S++S Y G+L AR +F + P RD V WT M+ G + RF +AV F +M L
Sbjct: 100 WNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGL 159
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK--- 374
P +F+L +L+ CA A G+ +H ++ + ++ VA +++ MY KCG E
Sbjct: 160 APSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARA 219
Query: 375 ----------------------------ALEIFYELREKDAASWTSIICGLAMNGKINKA 406
AL +F + E+ SW +II G NG + A
Sbjct: 220 VFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMA 279
Query: 407 LELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
L+ FS+M++ + +PD+ T VLSAC++ ++ G++ + + + + LI
Sbjct: 280 LKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRT-GMPYSSQIMNALI 338
Query: 466 DLLGRAGLLDEAEELIRK 483
++G ++ A ++ K
Sbjct: 339 STYAKSGSVETARRIMDK 356
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 318/597 (53%), Gaps = 45/597 (7%)
Query: 5 KQIQAQIFQIGLQQNP---ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+ + AQ+ G+ L + C P+ A ++F + +A+N L+
Sbjct: 79 RAVHAQLAARGIDSEALAATALANMYAKCRRPAD-----ARRVFDRMPVRDRVAWNALVA 133
Query: 62 AFAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ G R ++ + +++E G PD+ T V A + + H + +++GLE
Sbjct: 134 GYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLE 193
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
V +I+D Y G I + +FD MP K+ VSWN I G+ + +A+ +F RM
Sbjct: 194 ELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRM 253
Query: 181 -RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
+G ++ + +V++ L AC L L+ G +H ++ + G
Sbjct: 254 VEEGVDVT--DVSVLAALQACGELGCLDEGMRVH------------------ELLVRIGL 293
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ NV ++++ Y C +++ A +FD R V W AMI G Q
Sbjct: 294 ------------DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
++AV LF MQ+ +KPD F LV+++ A + Q +WIHGY + D V
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
TALI+MYAKCG + A +F RE+ +W ++I G +G A+ELF +M S G
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
P++ TF+ VLSACSH GLVDEGR +F +M E Y ++P +EHYG ++DLLGRAG LDEA
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
I+K+P + + +YGA+L AC+++ NV++ E+ A + ++ ++ +H LLANIYA+
Sbjct: 522 FIQKMPMDPG---LSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYAN 578
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
A+ W+DV VR M++ G++K PG S I++ IH F G +H + KEIYS L ++
Sbjct: 579 ASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 5/229 (2%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNV----ICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+LL + G L+ R + ++ + + + T++ + Y C + AR +FDR PV
Sbjct: 63 TSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPV 122
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKW 342
RD V W A++ GY + A+ + MQ +PD LV++L CA AL +
Sbjct: 123 RDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACRE 182
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
H + + + VATA+++ Y KCG I A +F + K++ SW ++I G A NG
Sbjct: 183 AHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGD 242
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
+AL LF++M+ G D++ + L AC G +DEG R + +
Sbjct: 243 SREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI 291
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/457 (39%), Positives = 260/457 (56%), Gaps = 42/457 (9%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
+LF M ++DVVSWN I G +K +A +F M M D
Sbjct: 2 RLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMP-----MKD-------------- 42
Query: 204 KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+ N +LD Y K G +++A LF+ MP +NV+ W++MVS
Sbjct: 43 --------------------AVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVS 82
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
GY G +E AR LFDR PV+++V WT +++GY +A+ F +M+ LKPD
Sbjct: 83 GYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGT 142
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
++++L CA+ G L GK +H I R V+ AL++MYAKCG +++AL +F +
Sbjct: 143 VISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMS 202
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+KD SW ++ GLAM+G KAL+LFS M G +PD +T + VL AC H G VDEG R
Sbjct: 203 KKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIR 262
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+FN M Y I P +EHYGC++DLLGR G L EA L++ +P E N +I +G LL AC
Sbjct: 263 YFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVI---WGTLLGAC 319
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
R++ V + E++ L K+E D ++LL+NI+ASA W V NVR +MK G++K G
Sbjct: 320 RMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSG 379
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
SSIE++ +HEF V D SH + +IY M++R+ L
Sbjct: 380 ASSIEVDDEVHEFTVFDKSHPKSDKIYQMINRLGLDL 416
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 137/323 (42%), Gaps = 66/323 (20%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE---------- 171
D N+I+D Y G++ LF+ MP+++VVSW+ +SG+ K E
Sbjct: 42 DAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMP 101
Query: 172 ---------------------DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
DA+ F +M + L PD+GTV+S L++C L LGK
Sbjct: 102 VKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEA-GLKPDDGTVISILASCAESGLLGLGK 160
Query: 211 EIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
+H I + + + + NAL+DMY KCG + A +F+ M K+++ W M+ G G
Sbjct: 161 RVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHG 220
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
EK A+ LF M+ +PDK LVA+L
Sbjct: 221 HGEK-------------------------------ALQLFSIMRQEGFRPDKVTLVAVLC 249
Query: 330 GCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDA 387
C G +++G ++ + + I ++++ + G +++A + + E +
Sbjct: 250 ACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNV 309
Query: 388 ASWTSIICGLAMNGKINKALELF 410
W +++ M+ + A E+
Sbjct: 310 VIWGTLLGACRMHNAVGLAEEVL 332
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 4/230 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + L+++ +++ +A KG + ++ F ++ E G+ PD+ T +
Sbjct: 88 GDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISIL 147
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ G + G++VH + + + V N+++DMY G++ +F+ M KD+V
Sbjct: 148 ASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLV 207
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN + G E A+ +F MRQ PD+ T+V+ L AC ++ G
Sbjct: 208 SWNCMLQGLAMHGHGEKALQLFSIMRQE-GFRPDKVTLVAVLCACVHAGFVDEGIRYFNN 266
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMV 262
+ ++ P + + ++D+ + G L EA L MP NV+ W +++
Sbjct: 267 MERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLL 316
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/471 (38%), Positives = 283/471 (60%), Gaps = 11/471 (2%)
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y GKI + LF + D D+ + +I+ +D + + P+E T
Sbjct: 72 YASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 193 VVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
S L +C+ + GK IH ++ + L P + L+D+Y K G + A+++FD MP
Sbjct: 131 FSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMP 186
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
++++ T+M++ Y G +E AR LFDR RDIV W MI+GY Q +A+ LF++
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 312 MQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+ + KPD+ +VA L+ C+Q+GALE G+WIH ++N +RI ++ V TALI+MY+KCG
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCG 306
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVL 429
+E+A+ +F + KD +W ++I G AM+G AL LF +M G +P DITFIG L
Sbjct: 307 SLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTL 366
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
AC+H GLV+EG + F +M + Y I+PK+EHYGCL+ LLGRAG L A E+I+ + E +
Sbjct: 367 QACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEAD 426
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
+ L+ ++L +C+++G +G+++A L +S + LL+NIYA +E V V
Sbjct: 427 SV---LWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKV 483
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
R MKE G+ K PG S+IEI+ +HEF GD H + KEIY+ML +M++ +
Sbjct: 484 RNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERI 534
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 203/446 (45%), Gaps = 73/446 (16%)
Query: 6 QIQAQIFQIGLQQNPE--TLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
QI A I + L +P LN L + + SHG + ++ +F P L + I
Sbjct: 45 QIHAAILRHNLLIHPRYPVLN-LKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTA 103
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G ++ LL+ +L ++P+ FT+ + K+ K G+ +H +V+K GL D
Sbjct: 104 SINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSC----STKSGKLIHTHVLKFGLGLDP 159
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDK------------------------------- 152
YV ++D+Y G + + +K+FD MP++
Sbjct: 160 YVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCER 219
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
D+VSWNV I G+ + DA+ +F+++ PDE TVV+ LSAC+ + LE G+ I
Sbjct: 220 DIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWI 279
Query: 213 HRYIN-QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H ++N + + AL+DMY KCG L EA +F++ P K+++ W +M++GY
Sbjct: 280 HVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYA----- 334
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTG 330
++GY Q +A+ LF EMQ I L+P + L
Sbjct: 335 ---------------------MHGYSQ-----DALRLFDEMQGITGLQPTDITFIGTLQA 368
Query: 331 CAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAA 388
CA G + +G I + E I L+ + + G +++A EI + E D+
Sbjct: 369 CAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSV 428
Query: 389 SWTSIICGLAMNGKINKALELFSQMI 414
W+S++ ++G+ E+ +I
Sbjct: 429 LWSSVLGSCKLHGEFMLGKEIAEYLI 454
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 32/258 (12%)
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ L YA G I +L +F++ + D +T+ I ++NG ++A L+ Q++S
Sbjct: 63 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 122
Query: 417 GAKPDDITFIGVLSACS--HGGLVDEGRRFFNTMTEVYQIQPKLEHYGC--LIDLLGRAG 472
P++ TF +L +CS G L+ T V + L+ Y L+D+ + G
Sbjct: 123 QINPNEFTFSSILKSCSTKSGKLIH---------THVLKFGLGLDPYVATGLVDIYAKGG 173
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
+ A+++ ++P + + A+++ GNV E AL +++ +D +
Sbjct: 174 DVVSAQKVFDRMPERS----LVSSTAMITCYAKQGNV---EAARALFDRMCERDIVSWNV 226
Query: 533 LANIYASANRWEDVTNVRQKMKEMG---------VRKVPGCSSI---EINGIIHEFLVGD 580
+ + Y+ D + QK+ G V + CS I E IH F+
Sbjct: 227 MIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSS 286
Query: 581 PSHSEMKEIYSMLDRMAK 598
+K +++D +K
Sbjct: 287 RIRLNVKVCTALIDMYSK 304
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 213/598 (35%), Positives = 323/598 (54%), Gaps = 64/598 (10%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P + + + L A ++F I P L++YN LI A+A G +L LFS
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 79 LRERGVSPDNFTYPFVFKA----VGWLGEVKKGEKVHGYVVKTGLEFDTYVC--NSIMDM 132
+RE G+ D FT V A VG +G++ H V +G FD+YV N+++
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQL------HSVAVSSG--FDSYVSVNNALLTY 182
Query: 133 YGVLGKICNVKKLFDEMPD-KDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDE 190
YG G + + K++F M +D VSWN I + + A+ +F+ M R+G N+ D
Sbjct: 183 YGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNV--DM 240
Query: 191 GTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGC-LSEARELFD 248
T+ S L+A T L++L G + H + I +G+ L+D+Y KCG +S+ R++F+
Sbjct: 241 FTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFE 300
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF-DEAVA 307
E+ D+VLW M++GY Q F ++A+
Sbjct: 301 EITEP-------------------------------DLVLWNTMVSGYSQNEEFLEDALE 329
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY-----INENRITVDAVVATAL 362
FR+MQ I +P+ V +++ C+ L + QGK IH I NRI+VD AL
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVD----NAL 385
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I MY+KCG ++ A +F + E + S S+I G A +G ++L LF M+ P
Sbjct: 386 IAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTS 445
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITFI VLSAC+H G V+EG +FN M E + I+P+ EHY C+IDLLGRAG L EAE LI
Sbjct: 446 ITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIA 505
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P I + +LL ACR +GN+++ K A + ++E +++ + +L+N+YASA R
Sbjct: 506 RMPFNPGSI---GWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGR 562
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
WE+V VR+ M++ GV+K PGCS IE+ IH F+ D SH +KEIY L+ M+ +
Sbjct: 563 WEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKM 620
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 172/407 (42%), Gaps = 62/407 (15%)
Query: 197 LSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L C A ++L GK +H YI + + N + +Y KCG L+ AR+ F ++ + NV
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
+ ++++ Y + A LFD+ P D+V + +I+ Y A+ LF M+ +
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 316 RLKPDKFILVALLTGCA-QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
L D F L A++T C +G + Q +H + V AL+ Y K G ++
Sbjct: 135 GLDMDGFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 375 ALEIFYELRE-KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A +FY + +D SW S+I + + +KAL LF +M+ G D T VL+A +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 434 -----------HGGLVDEG-------------------------RRFFNTMTEVYQIQPK 457
HG L+ G R+ F +TE P
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE-----PD 306
Query: 458 LEHYGCLIDLLGR-AGLLDEAEELIRKI------PNENNEIIVPLYGALLSACRIYGNVD 510
L + ++ + L++A E R++ PN+ + + V +SAC +
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCV------ISACSNLSSPS 360
Query: 511 MGEKLAALLEK--IESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
G+++ +L K I S S L +Y+ +D + +M E
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LL C L GK +H ++ I + I +Y+KCG + A + F ++ + +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
S+ +II A + A +LF Q+ +PD +++ ++SA + G F+
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 447 TMTEV 451
M E+
Sbjct: 130 GMREM 134
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 324/621 (52%), Gaps = 50/621 (8%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC--LLAYNLLIKAFAKKGSFRKSLLLF 76
+P + + H + G L A F ++ + +N ++ AFA+ ++ +F
Sbjct: 91 DPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVF 150
Query: 77 SKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGE--KVHGYVVKTGLEFDTYVCNSIMDMY 133
L G + PD++++ + AVG + + ++H V+K+G V N+++ +Y
Sbjct: 151 HALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALY 210
Query: 134 ---GVLGKICNVKKLFDEMPDKDVVSW-------------------------------NV 159
+ +K+ DEMPDKD ++W N
Sbjct: 211 MKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNA 270
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIH-RYIN 217
ISG+V+ DA ++FRRM +P DE T S LSAC GK +H + I
Sbjct: 271 MISGYVQSGMCADAFELFRRMVS--EKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR 328
Query: 218 QELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
+ F P + NAL+ +Y K G + A+ +FD M K+V+ W +++SGY++ G L+K
Sbjct: 329 LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDK 388
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
A ++F P ++ + W M++GYV ++A+ LF +M+ +KP + + C +
Sbjct: 389 AVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGE 448
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
LGAL+ G+ +H ++ + AL+ MYAKCG + A +F + D+ SW ++
Sbjct: 449 LGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAM 508
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I L +G +ALELF QM++ G PD I+F+ +L+AC+H GLVDEG +F +M +
Sbjct: 509 ISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFG 568
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I P +HY LIDLLGR+G + EA +LI+ +P E I + A+LS CR G+++ G
Sbjct: 569 ISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI---WEAILSGCRTNGDMEFGA 625
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
A L ++ + + LL+N Y++A RW D VR+ M++ GV+K PGCS IE+ I
Sbjct: 626 YAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKI 685
Query: 574 HEFLVGDPSHSEMKEIYSMLD 594
H FLVGD H E +E+Y L+
Sbjct: 686 HVFLVGDTKHPEAQEVYQFLE 706
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
P + L+ +Y L+ LF P+ + TS+V+ + G+L A FD P
Sbjct: 63 PHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPP 122
Query: 284 --RDIVLWTAMINGYVQFNRFDEAVALFRE-MQIIRLKPDKFILVALLTGCAQLG--ALE 338
RD VL AM++ + + + AV++F + L+PD + AL++ Q+ A
Sbjct: 123 ARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAP 182
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK---ALEIFYELREKDAASWTSIIC 395
+H + ++ V+ ALI +Y KC E A ++ E+ +KD +WT+++
Sbjct: 183 HCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVV 242
Query: 396 GLAMNGKINK-------------------------------ALELFSQMISGGAKPDDIT 424
G G +N A ELF +M+S D+ T
Sbjct: 243 GYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFT 302
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
F VLSAC++ G G+ + ++ ++QP
Sbjct: 303 FTSVLSACANAGFFVHGK---SVHGQIIRLQPNF 333
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 318/592 (53%), Gaps = 38/592 (6%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
+I + + G+++N + ++ F G + A+++F + + ++ +N +I + +
Sbjct: 151 EIISSAVEKGMEKNRFVGSSMISFLV--KFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQ 208
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G F + LF ++ G+ P T + +A G +G +K G+ +HGYV+ GL D V
Sbjct: 209 AGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILV 268
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
S +DMY +G I + + +F +MP +++VSWN ISG V+ ++ D+F R+ +
Sbjct: 269 LTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSG 328
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
D T+VS L C+ +L GK +H + E I+ A++D+Y K
Sbjct: 329 GF-DLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSK--------- 378
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
CG L++A +F+R R+++ WTAM+ G Q ++A
Sbjct: 379 ----------------------CGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDA 416
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ LF +MQ + + V+L+ CA LG+L++G+ IHG++ D V TAL++M
Sbjct: 417 LRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDM 476
Query: 366 YAKCGLIEKALEIF-YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
YAKCG I A IF + KD W S+I G M+G +A+ ++ +MI G KP+ T
Sbjct: 477 YAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTT 536
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ +LSACSH LV++G FN+M + I+P +HY CL+DLL RAG +EA+ LI K+
Sbjct: 537 FLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKM 596
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P + ++ ALLS CR + N+++G + + L +++ + + +L+NIYA A RW+
Sbjct: 597 PFQPGTAVLE---ALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWD 653
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
V +R M+ G++K PG S +E +H F GD SH +EIY L+ +
Sbjct: 654 KVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESL 705
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 30/330 (9%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
T +V Y + LE AR +FD+ +L AM+ GY+Q R+ E + LF M+ L+
Sbjct: 68 TKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLE 127
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
D L CA E G I E + + V +++I K G I +A +
Sbjct: 128 VDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRV 187
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS----- 433
F + KD W SII G G + A +LF +M G KP IT ++ AC
Sbjct: 188 FDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNL 247
Query: 434 ------HGGLVDEG--------RRFFNTMTEVYQIQP-----------KLEHYGCLIDLL 468
HG ++ G F + +++ I+ L + +I
Sbjct: 248 KLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGC 307
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
R GL+ E+ +L ++ + + +LL C ++ G+ L + +
Sbjct: 308 VRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLI 367
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGV 558
T + ++Y+ + T V +MK+ V
Sbjct: 368 LSTAIVDLYSKCGSLKQATFVFNRMKDRNV 397
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 279/494 (56%), Gaps = 36/494 (7%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+VH G+ + V N ++ Y + + LFD M +D VSW+V + G K
Sbjct: 79 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIM 226
+ + FR + + C PD T+ + AC LKNL++G+ IH + + L+ +
Sbjct: 139 GDYINCFGTFRELIR-CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV 197
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
AL+DMY V C ++E AR LFD+ RD+
Sbjct: 198 CAALVDMY-------------------------------VKCREIEDARFLFDKMQERDL 226
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V WT MI GY + + +E++ LF +M+ + PDK +V ++ CA+LGA+ + + I Y
Sbjct: 227 VTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 286
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I + +D ++ TA+I+MYAKCG +E A EIF + EK+ SW+++I +G+ KA
Sbjct: 287 IQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 346
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L+LF M+S G PD IT +L ACSH GLV+EG RFF++M E Y ++ ++HY C++D
Sbjct: 347 LDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVD 406
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LLGRAG LDEA +LI+ + E +E L+GA L ACR + +V + EK A L +++S++
Sbjct: 407 LLGRAGRLDEALKLIKSMTIEKDE---GLWGAFLGACRTHKDVVLAEKAATSLLELQSQN 463
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
+ LL+NIYA+A RWEDV +R M + ++K PG + IE++ H+F VGD +H
Sbjct: 464 PGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRS 523
Query: 587 KEIYSMLDRMAKTL 600
KEIY ML ++ L
Sbjct: 524 KEIYEMLKSLSNKL 537
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/494 (36%), Positives = 275/494 (55%), Gaps = 36/494 (7%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+VH G+ + V N ++ Y + + LFD M +D VSW+V + G K
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIM 226
+ + FR + + C PD T+ + AC LKNL++G+ IH + + L+ +
Sbjct: 815 GDYMNCFGTFRELIR-CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV 873
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
AL+DMY KC ++E AR LFD+ RD+
Sbjct: 874 CAALVDMYGKCR-------------------------------EIEDARFLFDKMXERDL 902
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V WT MI GY + +E++ LF +M+ + PDK +V ++ CA+LGA+ + + I Y
Sbjct: 903 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 962
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I + +D ++ TA+I+M+AKCG +E A EIF + EK+ SW+++I +G+ KA
Sbjct: 963 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 1022
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
L+LF M+ G P+ IT + +L ACSH GLV+EG RFF+ M E Y ++ ++HY C++D
Sbjct: 1023 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVD 1082
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LLGRAG LDEA +LI + E +E L+GA L ACR + +V + EK A L +++ ++
Sbjct: 1083 LLGRAGRLDEALKLIXSMTXEKDE---GLWGAFLGACRTHKDVXLAEKAATSLLELQPQN 1139
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
+ LL+NIYA+A RWEDV +R M + ++K+PG + IE++ H+F VGD +H
Sbjct: 1140 PGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRS 1199
Query: 587 KEIYSMLDRMAKTL 600
KEIY ML + L
Sbjct: 1200 KEIYEMLKSLGNKL 1213
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 210/397 (52%), Gaps = 37/397 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+TQ++Q+ AQ G+ +N NKL+ F ++ + L A +F + +++++++
Sbjct: 75 LTQVRQVHAQASVHGMLENIVVANKLIYFYSY--YRALDDAYGLFDGMCVRDSVSWSVMV 132
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
FAK G + F +L G PDN+T PFV +A L ++ G +H V K GL+
Sbjct: 133 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 192
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +VC +++DMY +I + + LFD+M ++D+V+W V I G+ +C + +++ +F +M
Sbjct: 193 LDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 252
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGC 239
R+ ++PD+ +V+ + AC L + + I YI ++ + I+G A++DMY KCGC
Sbjct: 253 REE-GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 311
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ ARE+FD M KNVI W++M++ Y GQ KA DLF ++L + M+
Sbjct: 312 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF------PMMLSSGML------ 359
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
PDK L +LL C+ G +E+G ++ + + D
Sbjct: 360 -------------------PDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKH 400
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSII 394
T ++++ + G +++AL++ + EKD W + +
Sbjct: 401 YTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFL 437
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 210/397 (52%), Gaps = 37/397 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+TQ++Q+ Q G+ QN NKL+ F ++ + L A +F + +++++++
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSY--YRALDDAYGLFDGMCVRDSVSWSVMV 808
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
FAK G + F +L G PDN+T PFV +A L ++ G +H V K GL+
Sbjct: 809 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 868
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D +VC +++DMYG +I + + LFD+M ++D+V+W V I G+ +C +++ +F +M
Sbjct: 869 LDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM 928
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGC 239
R+ ++PD+ +V+ + AC L + + I YI ++ + I+G A++DM+ KCGC
Sbjct: 929 REE-GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ ARE+FD M KNVI W++M++ Y GQ KA DLF ++L + ++
Sbjct: 988 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF------PMMLRSGIL------ 1035
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
P+K LV+LL C+ G +E+G ++ + + D
Sbjct: 1036 -------------------PNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKH 1076
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSII 394
T ++++ + G +++AL++ + EKD W + +
Sbjct: 1077 YTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFL 1113
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P+ + + T + + +E + F +Q RL P KF + AL+ C L + Q
Sbjct: 27 PIVESXIETQFRQTSLNLHNREEESSKFHFLQ--RLNP-KFYISALVN-CRNLTQVRQ-- 80
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H + + + + VVA LI Y+ ++ A +F + +D+ SW+ ++ G A G
Sbjct: 81 -VHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 139
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
F ++I GA+PD+ T V+ AC + GR + VY+ L+H+
Sbjct: 140 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI---VYKFGLDLDHF 196
Query: 462 GC--LIDLLGRAGLLDEAEELIRKIPNEN 488
C L+D+ + +++A L K+ +
Sbjct: 197 VCAALVDMYVKCREIEDARFLFDKMQERD 225
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
L Q + +H + + + + +VA L+ Y+ ++ A +F + +D+ SW+ ++ G
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
A G F ++I GA+PD+ T V+ AC + GR + VY+
Sbjct: 811 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI---VYKFGL 867
Query: 457 KLEHYGC--LIDLLGRAGLLDEAEELIRKIPNEN 488
L+H+ C L+D+ G+ +++A L K+ +
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERD 901
>gi|218194384|gb|EEC76811.1| hypothetical protein OsI_14939 [Oryza sativa Indica Group]
Length = 540
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 295/530 (55%), Gaps = 34/530 (6%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGV-SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
I A + R +L F+ LR G+ +P P + +A+ HG + G
Sbjct: 40 ISAIRAATAPRLALAAFACLRRVGLPAPGRRALPSLLRAIALARFPGTAGAAHGLAFRVG 99
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
E D +V +++ Y G++ + +K+FD MPD+D+V+W V + + + +E+A+ +F
Sbjct: 100 AEVDGFVGTALVRAYAACGRVEDARKVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFH 159
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKC 237
M++ ++PD+ + + LS C +NL GK IH Y + + + AL++MY C
Sbjct: 160 SMKRS-RVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDALIDAQVSCALMNMYASC 218
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
+ A +L++ + K+++ T+MV GY G++E A +F+ P +D+V W+AMI GY
Sbjct: 219 ADMEMAEKLYNRVSEKDIVLSTTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIAGYA 278
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ ++ EA+ LF +MQ ++PD+ ++++L
Sbjct: 279 ESSKPMEALNLFHDMQRSGVQPDEITMLSILP---------------------------- 310
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ALI+M++KCG + AL++F + +K+ +WTSII AM+G AL LF M S G
Sbjct: 311 IGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEG 370
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P+ +TF+G+L AC H GLV+EGR F M + Y+I+P EHYGC++DLLGRA LL +A
Sbjct: 371 IQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQA 430
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
+LI+ + N +I +G+LL+ACR++G++++G A + +++ LL+NIY
Sbjct: 431 ADLIQSMHLRPNVVI---WGSLLAACRMHGDLELGAFAAKKILELDPNHGGAQVLLSNIY 487
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
A W DV VR MK G K GCS +E+NG +H+F VG EMK
Sbjct: 488 AEYGNWNDVKEVRGVMKVQGTWKKKGCSWMELNGSVHQFAVGGEKILEMK 537
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 167/375 (44%), Gaps = 40/375 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + L+A+ +++ + + ++ ++LLLF ++ V PD V
Sbjct: 118 GRVEDARKVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVL 177
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
++ G+ +H Y++ + D V ++M+MY + +KL++ + +KD+V
Sbjct: 178 STCAHTRNLRFGKAIHSYMLVSDALIDAQVSCALMNMYASCADMEMAEKLYNRVSEKDIV 237
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+ G+ K + E A +F M + +++ + + ++ L L ++ R
Sbjct: 238 LSTTMVYGYAKNGKVEIAHSIFNGMPEK-DVVSWSAMIAGYAESSKPMEALNLFHDMQRS 296
Query: 216 INQELEFT-----PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
Q E T PI GNAL+DM+ KCG L+ A ++F+ MP KNV+ WTS+++ G
Sbjct: 297 GVQPDEITMLSILPI-GNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGD 355
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
RS A+ LF M+ ++P+ + LL
Sbjct: 356 --------GRS-----------------------ALTLFENMKSEGIQPNGVTFLGLLYA 384
Query: 331 CAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAA 388
C G +E+G+ + + + RI ++++ + L+ +A ++ + +
Sbjct: 385 CCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVV 444
Query: 389 SWTSIICGLAMNGKI 403
W S++ M+G +
Sbjct: 445 IWGSLLAACRMHGDL 459
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
AEK++ + ++ ++ +AK G + +F+ + E+ V + G+
Sbjct: 224 AEKLYNRVSEKDIVLSTTMVYGYAKNGKVEIAHSIFNGMPEKDV------VSWSAMIAGY 277
Query: 101 LGEVKKGEKVHGY--VVKTGLEFDTY-------VCNSIMDMYGVLGKICNVKKLFDEMPD 151
K E ++ + + ++G++ D + N+++DM+ G + +F+ MP
Sbjct: 278 AESSKPMEALNLFHDMQRSGVQPDEITMLSILPIGNALIDMFSKCGSLTLALDVFNAMPQ 337
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K+VV+W I+ A+ +F M+ + P+ T + L AC +E G+
Sbjct: 338 KNVVTWTSIITASAMHGDGRSALTLFENMKSE-GIQPNGVTFLGLLYACCHAGLVEEGRL 396
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNC 268
+ + + Q+ P+ + ++D+ + L +A +L M NV+ W S+++
Sbjct: 397 LFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMH 456
Query: 269 GQLE 272
G LE
Sbjct: 457 GDLE 460
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/527 (35%), Positives = 293/527 (55%), Gaps = 38/527 (7%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV-------------------- 142
++ G +H +++KT L FD ++ N ++DMY + N
Sbjct: 26 HLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIRNIHSWNTILA 85
Query: 143 -----------KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP-DE 190
+K+FDEMP ++VS+N IS + +++++FR+M+Q +L+ DE
Sbjct: 86 SYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDE 145
Query: 191 GTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T+VS C L LE +++H I LEF I+ NA++D Y KCG + +F
Sbjct: 146 ITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSR 205
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
M ++V+ WTSMV Y +L+ A +F PV+++ WTA+IN V+ +EA+ LF
Sbjct: 206 MKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALINALVKNKYSNEALDLF 265
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD---AVVATALIEMY 366
++M + P+ F V +L+ CA L + +GK IHG I ++ V ALI++Y
Sbjct: 266 QQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALIDLY 325
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
+K G ++ A +F + EKD SW S+I G A NG +AL F +M G +P+ +TF+
Sbjct: 326 SKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNKVTFL 385
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
VLSACSH GL EG M + Y I+P LEHY +ID+ GR L EA +LI + PN
Sbjct: 386 AVLSACSHTGLSSEGLCILELMEKFYDIEPSLEHYAVMIDMFGRENRLAEALDLISRAPN 445
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
+ V ++GA+L ACRI+ N+D+ + A L ++E ++ + +L+N++A+A+RW D
Sbjct: 446 GSKH--VGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAGRYVMLSNVFAAASRWMDA 503
Query: 547 TNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
NVR+ M+E G +K S IEI I H+F+ D SHS+M EIY ++
Sbjct: 504 HNVRKLMEERGFKKEVAYSCIEIRNIRHKFVARDNSHSQMGEIYELM 550
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 157/336 (46%), Gaps = 36/336 (10%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
+L P S C K+L +G +H + I L F + N L+DMY KC + A
Sbjct: 6 DLFPSFDHCARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENA 65
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++ FD++P +N+ W ++++ Y G +AR +FD P +IV + +I+ + +
Sbjct: 66 QKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYV 125
Query: 304 EAVALFREMQ--IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
E++ +FR+MQ L D+ LV++ CA LGALE + +HG + + +V A
Sbjct: 126 ESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNA 185
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIIC-------------------------- 395
+++ Y KCG + + IF ++E+D +WTS++
Sbjct: 186 IVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTW 245
Query: 396 -----GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
L N N+AL+LF QM+ P+ TF+GVLSAC+ L+ +G+ +
Sbjct: 246 TALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIR 305
Query: 451 VYQIQPKLEHYGC--LIDLLGRAGLLDEAEELIRKI 484
Y C LIDL ++G + A L I
Sbjct: 306 RSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLI 341
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 67/349 (19%)
Query: 28 VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG--VS 85
+ ++ G A K+F + P +++YN LI +F G + +S+ +F ++++ ++
Sbjct: 83 ILASYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLA 142
Query: 86 PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL 145
D T + LG ++ +VHG + GLEF+ VCN+I+D YG G +
Sbjct: 143 LDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSI 202
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM---------------------RQGC 184
F M ++DVV+W + + + R +DA VF M +
Sbjct: 203 FSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALINALVKNKYSNEAL 262
Query: 185 NLM---------PDEGTVVSTLSACTALKNLELGKEIHRYI---NQELEFTPI-MGNALL 231
+L P+ T V LSAC L + GKEIH I + EL F + + NAL+
Sbjct: 263 DLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALI 322
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
D+Y K G + AR LF+ + K+V+ W S+++G+ G
Sbjct: 323 DLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNG---------------------- 360
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
R EA+ FR+M + ++P+K +A+L+ C+ G +G
Sbjct: 361 -------LGR--EALLAFRKMTEVGIRPNKVTFLAVLSACSHTGLSSEG 400
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 322/595 (54%), Gaps = 64/595 (10%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
+P + + + L A ++F I P L++YN LI A+A G +L LFS
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 79 LRERGVSPDNFTYPFVFKA----VGWLGEVKKGEKVHGYVVKTGLEFDTYVC--NSIMDM 132
+RE G+ D FT V A VG +G++ H V +G FD+YV N+++
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQL------HSVAVSSG--FDSYVSVNNALLTY 182
Query: 133 YGVLGKICNVKKLFDEMPD-KDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDE 190
YG G + + K++F M +D VSWN I + + A+ +F+ M R+G N+ D
Sbjct: 183 YGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNV--DM 240
Query: 191 GTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGC-LSEARELFD 248
T+ S L+A T L++L G + H + I +G+ L+D+Y KCG +S+ R++F+
Sbjct: 241 FTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFE 300
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF-DEAVA 307
E+ D+VLW M++GY Q F ++A+
Sbjct: 301 EITEP-------------------------------DLVLWNTMVSGYSQNEEFLEDALE 329
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY-----INENRITVDAVVATAL 362
FR+MQ I +P+ V +++ C+ L + QGK IH I NRI+VD AL
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVD----NAL 385
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I MY+KCG ++ A +F + E + S S+I G A +G ++L LF M+ P
Sbjct: 386 IAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTS 445
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITFI VLSAC+H G V+EG +FN M E + I+P+ EHY C+IDLLGRAG L EAE LI
Sbjct: 446 ITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIA 505
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P I + +LL ACR +GN+++ K A + ++E +++ + +L+N+YASA R
Sbjct: 506 RMPFNPGSI---GWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGR 562
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
WE+V VR+ M++ GV+K PGCS IE+ IH F+ D SH +KEIY L+ M+
Sbjct: 563 WEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMS 617
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 172/407 (42%), Gaps = 62/407 (15%)
Query: 197 LSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L C A ++L GK +H YI + + N + +Y KCG L+ AR+ F ++ + NV
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
+ ++++ Y + A LFD+ P D+V + +I+ Y A+ LF M+ +
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 316 RLKPDKFILVALLTGCA-QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
L D F L A++T C +G + Q +H + V AL+ Y K G ++
Sbjct: 135 GLDMDXFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 375 ALEIFYELRE-KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
A +FY + +D SW S+I + + +KAL LF +M+ G D T VL+A +
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 434 -----------HGGLVDEG-------------------------RRFFNTMTEVYQIQPK 457
HG L+ G R+ F +TE P
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE-----PD 306
Query: 458 LEHYGCLIDLLGR-AGLLDEAEELIRKI------PNENNEIIVPLYGALLSACRIYGNVD 510
L + ++ + L++A E R++ PN+ + + V +SAC +
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCV------ISACSNLSSPS 360
Query: 511 MGEKLAALLEK--IESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
G+++ +L K I S S L +Y+ +D + +M E
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LL C L GK +H ++ I + I +Y+KCG + A + F ++ + +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
S+ +II A + A +LF Q+ +PD +++ ++SA + G F+
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 447 TMTEV 451
M E+
Sbjct: 130 GMREM 134
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 284/482 (58%), Gaps = 12/482 (2%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV---FR 178
+ Y N ++ Y LG + N +KLFD M +KDVVSWN + + K F +A+ + FR
Sbjct: 128 NLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFR 187
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKC 237
R+ G N G ++ C LK L+L K++H + + ++ ++++D Y KC
Sbjct: 188 RLDMGFNAFSFAGVLI----LCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKC 243
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G + AR LFDEM K++ WT++VSGY G + A +LF + P ++ V W+A+I+GY
Sbjct: 244 GEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYA 303
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ + EA+ F +M + P+++ + L CA + AL+ GK +HGY+ + +
Sbjct: 304 RNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTI 363
Query: 358 VATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISG 416
V ++LI+MY+KCG++E + +F+ + K D W ++I LA NG KA+++F+ M+
Sbjct: 364 VVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVES 423
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G KPD ITFI +LSACSH GLV EG RFF MT + + P EHY CLIDLLGRAG
Sbjct: 424 GLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCF-- 481
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
EL+ ++ N + + ++ ALL CRI+ N+++G K+A + +++ + S+ + LA++
Sbjct: 482 -VELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASL 540
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YA +WE V VR+ M E +RK G S I++ H F+ D H +EIY +L+++
Sbjct: 541 YAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQL 600
Query: 597 AK 598
A+
Sbjct: 601 AR 602
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 178/379 (46%), Gaps = 41/379 (10%)
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIM 226
R +A+ R+ Q +P G V L C K + GK +H ++ T I+
Sbjct: 42 RLPEALSYLDRLAQRGVRLP-TGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIV 100
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
N L+ MY +CG EAR++FD+M +N+ W M++GY G + AR LFDR +D+
Sbjct: 101 ANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDV 160
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V W ++ Y + F+EA+ L+R+ + + + + F +L C +L L+ K +HG
Sbjct: 161 VSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQ 220
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
+ + V+++++++ YAKCG + A +F E+ KD +WT+I+ G A G +N A
Sbjct: 221 VLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSA 280
Query: 407 LELFSQM-----------ISG--------------------GAKPDDITFIGVLSACSHG 435
ELF QM ISG G P+ TF L AC+
Sbjct: 281 SELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASI 340
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
+ G++ + Y + LID+ + G+L+ + + + N+ + ++
Sbjct: 341 AALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVV--- 396
Query: 496 YGALLSACRIYGNVDMGEK 514
+ ++SA G+ GEK
Sbjct: 397 WNTMISALAQNGH---GEK 412
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 204/482 (42%), Gaps = 103/482 (21%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A K+F + ++++N ++ A+AK+G F +++ L+ R + + F++ V
Sbjct: 143 GDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVL 202
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM------ 149
L E++ ++VHG V+ G + + +SI+D Y G++ + LFDEM
Sbjct: 203 ILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIH 262
Query: 150 -------------------------PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ-G 183
P+K+ VSW+ ISG+ + +A+D F +M + G
Sbjct: 263 AWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFG 322
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
N P++ T S L AC ++ L+ GK++H Y I I+ ++L+DMY KCG L
Sbjct: 323 IN--PEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEA 380
Query: 243 ARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+ +F M NK +V+ W +M+S G EKA +F+
Sbjct: 381 SCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFN---------------------- 418
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVAT 360
+M LKPD+ + +L+ C+ G +++G ++ ++ + D +
Sbjct: 419 ---------DMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYS 469
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
LI++ + G +EL +++ + KP
Sbjct: 470 CLIDLLGRAGCF----------------------------------VELVNELENMSCKP 495
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVY-QIQPKLEHYGCLIDLLGRAGLLDEAEE 479
DD + +L C ++ GR+ + E+ Q L LG+ +++ E
Sbjct: 496 DDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRE 555
Query: 480 LI 481
L+
Sbjct: 556 LM 557
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 290/494 (58%), Gaps = 10/494 (2%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+++ +++HGY ++ G++ + +++ + + K+ P + +N I
Sbjct: 1 MRQVKQIHGYTLRNGIDQTKILIEKLLE----IPNLHYAHKVLHHSPKPTLFLYNKLIQA 56
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
+ + + + +P++ T SACT+L + LG+ +H +I E
Sbjct: 57 YSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEP 116
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
ALLDMY K G L AR+LFD+MP + V W +M++G+ G ++ A +LF P
Sbjct: 117 DLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMP 176
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGK 341
R++V WT MI+GY + ++ EA+ LF M+ + + P+ L ++ A LGALE G+
Sbjct: 177 SRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQ 236
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE-KDAASWTSIICGLAMN 400
+ Y +N + V+ A++EMYAKCG I+ A ++F E+ ++ SW S+I GLA++
Sbjct: 237 RVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVH 296
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ K L+L+ QM+ G PDD+TF+G+L AC+HGG+V++GR F +MT + I PKLEH
Sbjct: 297 GECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEH 356
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC++DLLGRAG L EA E+I+++P + + +I +GALL AC + NV++ E A L
Sbjct: 357 YGCMVDLLGRAGQLREAYEVIQRMPMKPDSVI---WGALLGACSFHDNVELAEIAAESLF 413
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+E + + +L+NIYASA +W+ V +R+ MK + K G S IE G +H+F+V D
Sbjct: 414 ALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVED 473
Query: 581 PSHSEMKEIYSMLD 594
SH E EI+++LD
Sbjct: 474 RSHPESNEIFALLD 487
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 191/442 (43%), Gaps = 73/442 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M Q+KQI + G+ Q + KL+ NL YA K+ P L YN LI
Sbjct: 1 MRQVKQIHGYTLRNGIDQTKILIEKLLEI------PNLHYAHKVLHHSPKPTLFLYNKLI 54
Query: 61 KAFAKKGSFRKSLL-LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+A++ + L+S++ P+ T+ F+F A L G+ +H + +K+G
Sbjct: 55 QAYSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGF 114
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEM------------------------------ 149
E D + +++DMY +G + +KLFD+M
Sbjct: 115 EPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRL 174
Query: 150 -PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
P ++VVSW ISG+ + ++ +A+ +F RM Q +MP+ T+ S A L LE+
Sbjct: 175 MPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEI 234
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPN-KNVICWTSMVSGYV 266
G+ + Y + F + + NA+L+MY KCG + A ++F+E+ + +N+ W SM+ G
Sbjct: 235 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLA 294
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G+ K L+D+ E + PD V
Sbjct: 295 VHGECCKTLKLYDQ--------------------MLGEGTS-----------PDDVTFVG 323
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELREK 385
LL C G +E+G+ I + + + + ++++ + G + +A E+ + K
Sbjct: 324 LLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMK 383
Query: 386 -DAASWTSIICGLAMNGKINKA 406
D+ W +++ + + + A
Sbjct: 384 PDSVIWGALLGACSFHDNVELA 405
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 316/600 (52%), Gaps = 42/600 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A + ++G ++ T N L+ + G + A IF + ++++N LI
Sbjct: 222 RQVHAMVVRMGYDKDVFTANALVDM--YMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G +++ L +++ G+ P+ FT + KA G G ++HG+++K + D Y
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++DMY + + +K+FD M +D++ N ISG R ++A+ +F +R+
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKE- 398
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
L + T+ + L + +L+ +++H + F + N L+D Y KC CLS+A
Sbjct: 399 GLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+ F+ DI+ T+MI Q + +
Sbjct: 459 NRV-------------------------------FEECSSGDIIACTSMITALSQCDHGE 487
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ LF EM L+PD F+L +LL CA L A EQGK +H ++ + + DA AL+
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
YAKCG IE A F L E+ SW+++I GLA +G +ALELF +M+ G P+ I
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T VL AC+H GLVDE +R+FN+M E++ I EHY C+IDLLGRAG LD+A EL+
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + N I +GALL A R++ + ++G+ A L +E + S H LLAN YASA W
Sbjct: 668 MPFQANASI---WGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMW 724
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML----DRMAKT 599
+V VR+ MK+ ++K P S IE+ +H F+VGD SH KEIY+ L D M+K
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKA 784
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 196/395 (49%), Gaps = 37/395 (9%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F I PC ++++ L+ A++ G R ++ F +R GV + F P V K V
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCV-- 113
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM-PDKDVVSWNV 159
+ + G +VH + TG D +V N+++ MYG G + + +++F+E +++ VSWN
Sbjct: 114 -PDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNG 172
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQ 218
+S +VK + DA+ VF M + P E ++ACT +N+E G+++H +
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRM 231
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
+ NAL+DMY K G + A +F++MP+ +V+ W +++SG V
Sbjct: 232 GYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV------------ 279
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+NG+ A+ L +M+ L P+ F L ++L C+ GA +
Sbjct: 280 --------------LNGHDH-----RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ IHG++ + D + L++MYAK ++ A ++F + +D ++I G +
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCS 380
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
G+ ++AL LF ++ G + T VL + +
Sbjct: 381 HGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 219/482 (45%), Gaps = 37/482 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP-CLLAYNLLIKAFA 64
Q+ A G + N L+ + G + A ++F S +++N L+ A+
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K ++ +F ++ G+ P F + V A ++ G +VH VV+ G + D +
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
N+++DMY +G++ +F++MPD DVVSWN ISG V A+++ +M+
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYS- 297
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
L+P+ T+ S L AC+ +LG++IH + I + +G L+DMY K L +A
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R++FD M + RD++L A+I+G R D
Sbjct: 358 RKVFDWMFH-------------------------------RDLILCNALISGCSHGGRHD 386
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA++LF E++ L ++ L A+L A L A + +H + DA V LI
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ Y KC + A +F E D + TS+I L+ A++LF +M+ G +PD
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+L+AC+ ++G++ + + Q L+ + G +++AE
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 484 IP 485
+P
Sbjct: 566 LP 567
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 192/449 (42%), Gaps = 50/449 (11%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G +H ++K+G ++ N ++ Y + C +++FDE+PD VSW+ ++ +
Sbjct: 23 GAHLHASLLKSG-SLASFR-NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK---NLELGKEIHRY-INQELEF 222
A+ F MR EG + + LK + LG ++H +
Sbjct: 81 NGLPRSAIQAFHGMRA-------EGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGS 133
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ MY G + +AR +F+E ++
Sbjct: 134 DVFVANALVAMYGGFGFMDDARRVFNEADSE----------------------------- 164
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R+ V W +++ YV+ ++ +A+ +F EM ++P +F ++ C +E G+
Sbjct: 165 -RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ 223
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H + D A AL++MY K G ++ A IF ++ + D SW ++I G +NG
Sbjct: 224 VHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 283
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
++A+EL QM G P+ T +L ACS G D GR+ M + G
Sbjct: 284 DHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG 343
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
L+D+ + LD+A ++ + + + + L AL+S C G D E L+ E
Sbjct: 344 -LVDMYAKNHFLDDARKVFDWMFHRD----LILCNALISGCSHGGRHD--EALSLFYELR 396
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQ 551
+ T LA + S E + RQ
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASTTRQ 425
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 211/608 (34%), Positives = 316/608 (51%), Gaps = 85/608 (13%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVG 99
A K+F + ++++N +I+++AK G + +L +FS++ E G PDN T V
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
LG G+++H + V + + + +V N ++DMY G + +F M KDVVSWN
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 160 SISGHVKCMRFEDAVDVFRRMRQ----------------------------------GCN 185
++G+ + RFEDAV +F +M++
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP-------IMGNALLDMYCKC 237
+ P+E T++S LS C ++ L GKEIH Y I ++ ++ N L+DMY KC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR-SPV-RDIVLWTAMING 295
+++ AR +FD SP RD+V WT MI G
Sbjct: 421 K-------------------------------KVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 296 YVQFNRFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI- 352
Y Q ++A+ L EM + + +P+ F + L CA L AL GK IH Y N+
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
V V+ LI+MYAKCG I A +F + K+ +WTS++ G M+G +AL +F +
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M G K D +T + VL ACSH G++D+G +FN M V+ + P EHY CL+DLLGRAG
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
L+ A LI ++P E ++ + A LS CRI+G V++GE A + ++ S +TL
Sbjct: 630 RLNAALRLIEEMPMEPPPVV---WVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE-INGIIHEFLVGDPSHSEMKEIYS 591
L+N+YA+A RW+DVT +R M+ GV+K PGCS +E I G F VGD +H KEIY
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQ 745
Query: 592 -MLDRMAK 598
+LD M +
Sbjct: 746 VLLDHMQR 753
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 258/497 (51%), Gaps = 23/497 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLN-KLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYN 57
++Q+K I ++ G+ TLN + T+ S G L +A + + +N
Sbjct: 41 ISQVKLIHQKLLSFGIL----TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+++ G K L LF + +PDN+T+PFVFKA G + V+ GE H + T
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G + +V N+++ MY + + +K+FDEM DVVSWN I + K + + A+++F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
RM PD T+V+ L C +L LGK++H + + E+ +GN L+DMY K
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR----DIVLWTAM 292
CG + EA +F M K+V+ W +MV+GY G+ E A LF++ D+V W+A
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY------ 346
I+GY Q EA+ + R+M +KP++ L+++L+GCA +GAL GK IH Y
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 347 -INENRITVDAVVATALIEMYAKCGLIEKALEIFYEL--REKDAASWTSIICGLAMNGKI 403
+ +N + +V LI+MYAKC ++ A +F L +E+D +WT +I G + +G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 404 NKALELFSQMISGG--AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
NKALEL S+M +P+ T L AC+ + G++ Q L
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 462 GCLIDLLGRAGLLDEAE 478
CLID+ + G + +A
Sbjct: 517 NCLIDMYAKCGSISDAR 533
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 322/587 (54%), Gaps = 44/587 (7%)
Query: 51 PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
P +++++ +I FA+ G +++ + +++ G+ P+ T V A L + G+++
Sbjct: 260 PNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQL 319
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKI-----------------CNV----------- 142
HGY+ + + V N+++D+Y G + CN
Sbjct: 320 HGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDV 379
Query: 143 ---KKLFDEMP----DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
K+LFD M ++ ++SWN ISG+V+ F++A +F+ M + PD T+ S
Sbjct: 380 SKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGS 439
Query: 196 TLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L+AC +L GKEIH + I + L+ +G AL++MY KC L+ A+ FDE+ K+
Sbjct: 440 VLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKD 499
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSP----VRDIVLWTAMINGYVQFNRFDEAVALFR 310
V W +++SGY Q+E+ + L ++ +I W +++ G V+ + D + LF
Sbjct: 500 VPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFS 559
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
EMQI +L+PD + + +L C++L LE+GK H + + D + AL++MYAKCG
Sbjct: 560 EMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCG 619
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
++ A + + + S +++ AM+G + + LF M++ G PD +TF+ VLS
Sbjct: 620 SLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLS 679
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
+C H G V+ G FF+ M Y ++P L+HY ++DLL R+G L EA ELI+K+P E +
Sbjct: 680 SCVHVGSVETGCEFFDLMG-YYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDS 738
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVR 550
+ L+GALL C +GN+++GE A L ++E +S + LLAN++A A RW D+ VR
Sbjct: 739 V---LWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVR 795
Query: 551 QKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
MK+ G+ K PGCS IE IH FL D SH +EIY+ LD +A
Sbjct: 796 GMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLA 842
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/592 (29%), Positives = 284/592 (47%), Gaps = 93/592 (15%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A + G + KL+ + G L A+ +F ++ L ++ ++ +
Sbjct: 79 KQVHAHTIKTGFDADGFIDTKLLQM--YARCGLLKDADFLFETMPMRNLHSWKAILSVYL 136
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G F ++ LLF L+ GV D F +P VFKA LG V+ G ++HG V+K + Y
Sbjct: 137 DHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIY 196
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKD------------------------------- 153
V N+++DMYG G + + KK+ +MP++D
Sbjct: 197 VSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLD 256
Query: 154 -----VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
VVSW+ I G + E+A+++ RM Q L+P+ T+ L AC L+ L+L
Sbjct: 257 YSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRM-QVEGLVPNAQTLAGVLPACARLQRLDL 315
Query: 209 GKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
GK++H YI + + P++ NAL+D+Y +CG + A ++F + KNV+ +M+ GY
Sbjct: 316 GKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCE 375
Query: 268 CGQLEKARDLFDRSPV----RDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKF 322
G + KA++LFD V R ++ W ++I+GYV+ FDEA ++F+ M + ++PD F
Sbjct: 376 SGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSF 435
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
L ++LT CA +L QGK IH + D V AL+EMY+KC + A F E+
Sbjct: 436 TLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEV 495
Query: 383 REKDAA-----------------------------------SWTSIICGLAMNGKINKAL 407
EKD +W SI+ GL N +++ +
Sbjct: 496 MEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTM 555
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE---HYG-C 463
+LFS+M +PD T +L ACS ++ G++ + I+ + H G
Sbjct: 556 QLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQ-----AHAHSIKCGYDTDVHIGAA 610
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
L+D+ + G L A+ +I N N + + A+L+AC ++G+ + G L
Sbjct: 611 LVDMYAKCGSLKYAQLAYDRISNPN----LVSHNAMLTACAMHGHGEEGISL 658
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 230/463 (49%), Gaps = 18/463 (3%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K G++VH + +KTG + D ++ ++ MY G + + LF+ MP +++ SW +S +
Sbjct: 76 KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVY 135
Query: 165 VKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEF 222
+ FE+A +F+ ++ G L D AC+ L ++ELG+++H I
Sbjct: 136 LDHGLFEEAFLLFQVLQFDGVEL--DFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCL 193
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+DMY KCG L +A+++ +MP ++ + W S+++ G + +A + ++
Sbjct: 194 NIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMK 253
Query: 283 VRD-----IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
D +V W+A+I G+ Q +EA+ + MQ+ L P+ L +L CA+L L
Sbjct: 254 SLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRL 313
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
+ GK +HGYI + + VV AL+++Y +CG + A +IF + K+ S ++I G
Sbjct: 314 DLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGY 373
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+G ++KA ELF M G + I++ ++S + DE F M I+P
Sbjct: 374 CESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPD 433
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL---SACRIYGNVDMGEK 514
G ++ L + +E+ + + + + GAL+ S C+ D+
Sbjct: 434 SFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQ-----DLTAA 488
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
A E +E +++ L++ Y +N+ E + + +KMK G
Sbjct: 489 QVAFDEVMEKDVPTWNALISG-YTRSNQIERIQYLLEKMKGDG 530
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 116/234 (49%), Gaps = 5/234 (2%)
Query: 42 EKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL 101
EK+ G P + +N ++ + ++ LFS+++ + PD +T + A L
Sbjct: 524 EKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRL 583
Query: 102 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
+++G++ H + +K G + D ++ +++DMY G + + +D + + ++VS N +
Sbjct: 584 ATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAML 643
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
+ E+ + +F+ M +PD T +S LS+C + ++E G E +
Sbjct: 644 TACAMHGHGEEGISLFQTML-ALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMGY-YN 701
Query: 222 FTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
P + + +++D+ + G L EA EL +MP + + + W +++ G V G +E
Sbjct: 702 VKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGNIE 755
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L YA+ + I +P L+++N ++ A A G + + LF + G PD+ T+ V
Sbjct: 619 GSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVL 678
Query: 96 KAVGWLGEVKKG----EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP- 150
+ +G V+ G + + Y VK L+ T S++D+ G++ +L +MP
Sbjct: 679 SSCVHVGSVETGCEFFDLMGYYNVKPTLKHYT----SMVDLLSRSGQLHEAYELIKKMPV 734
Query: 151 DKDVVSWNVSISGHV 165
+ D V W + G V
Sbjct: 735 ECDSVLWGALLGGCV 749
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 284/482 (58%), Gaps = 12/482 (2%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV---FR 178
+ Y N ++ Y LG + N +KLFD M +KDVVSWN + + K F +A+ + FR
Sbjct: 128 NLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFR 187
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKC 237
R+ G N G ++ C LK L+L K++H + + ++ ++++D Y KC
Sbjct: 188 RLDMGFNAFSFAGVLI----LCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKC 243
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G + AR LFDEM K++ WT++VSGY G + A +LF + P ++ V W+A+I+GY
Sbjct: 244 GEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYA 303
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ + EA+ F +M + P+++ + L CA + AL+ GK +HGY+ + +
Sbjct: 304 RNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTI 363
Query: 358 VATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISG 416
V ++LI+MY+KCG++E + +F+ + K D W ++I LA NG KA+++F+ M+
Sbjct: 364 VVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVES 423
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G KPD ITFI +LSACSH GLV EG RFF MT + + P EHY CLIDLLGRAG
Sbjct: 424 GLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCF-- 481
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
EL+ ++ N + + ++ ALL CRI+ N+++G K+A + +++ + S+ + LA++
Sbjct: 482 -VELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASL 540
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
YA +WE V VR+ M E +RK G S I++ H F+ D H +EIY +L+++
Sbjct: 541 YAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQL 600
Query: 597 AK 598
A+
Sbjct: 601 AR 602
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 41/379 (10%)
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIM 226
R +A+ R+ Q +P G V L C K + GK +H ++ T I+
Sbjct: 42 RLPEALSYLDRLAQRGIRLP-TGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIV 100
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
N L+ MY +CG EAR++FD+M +N+ W M++GY G + AR LFDR +D+
Sbjct: 101 ANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDV 160
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
V W ++ Y + F+EA+ L+R+ + + + + F +L C +L L+ K +HG
Sbjct: 161 VSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQ 220
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
+ + V+++++++ Y+KCG + A +F E+ KD +WT+I+ G A G +N A
Sbjct: 221 VLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSA 280
Query: 407 LELFSQM-----------ISG--------------------GAKPDDITFIGVLSACSHG 435
ELF QM ISG G P+ TF L AC+
Sbjct: 281 SELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASI 340
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
+ G++ + Y + LID+ + G+L+ + + + N+ + ++
Sbjct: 341 AALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVV--- 396
Query: 496 YGALLSACRIYGNVDMGEK 514
+ ++SA G+ GEK
Sbjct: 397 WNTMISALAQNGH---GEK 412
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 203/482 (42%), Gaps = 103/482 (21%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A K+F + ++++N ++ A+AK+G F +++ L+ R + + F++ V
Sbjct: 143 GDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVL 202
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM------ 149
L E++ ++VHG V+ G + + +SI+D Y G++ + LFDEM
Sbjct: 203 ILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIH 262
Query: 150 -------------------------PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ-G 183
P+K+ VSW+ ISG+ + +A+D F +M + G
Sbjct: 263 AWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFG 322
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
N P++ T S L AC ++ L+ GK++H Y I I+ ++L+DMY KCG L
Sbjct: 323 IN--PEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEA 380
Query: 243 ARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+ +F M NK +V+ W +M+S G EKA +F+
Sbjct: 381 SCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFN---------------------- 418
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVAT 360
+M LKPD+ + +L+ C+ G +++G ++ ++ + D
Sbjct: 419 ---------DMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYA 469
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
LI++ + G +EL +++ + KP
Sbjct: 470 CLIDLLGRAGCF----------------------------------VELVNELENMSCKP 495
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVY-QIQPKLEHYGCLIDLLGRAGLLDEAEE 479
DD + +L C ++ GR+ + E+ Q L LG+ +++ E
Sbjct: 496 DDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRE 555
Query: 480 LI 481
L+
Sbjct: 556 LM 557
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/601 (31%), Positives = 317/601 (52%), Gaps = 81/601 (13%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ +KQIQA IF+ L P KL++ C +L YA ++F I++P + YN LI
Sbjct: 18 LRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMYNTLI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ + + +L LF ++R + V+ PD+F++ F+ KA + G ++H V GL
Sbjct: 78 RGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGL 137
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ +V +++ MY + +K+FDEM + ++V+WN ++ +C +DA VFR
Sbjct: 138 DSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFR- 196
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
C ++NL N +L Y K G
Sbjct: 197 --------------------CMPIRNL------------------TSWNIMLAGYTKAGE 218
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L ARE+F +MP K+ + W++M+ G+ + G
Sbjct: 219 LQLAREVFMKMPLKDDVSWSTMIVGFAHNGN----------------------------- 249
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
F++A A FRE++ ++P++ L +L+ CAQ GA E G+ +HG++ ++ V
Sbjct: 250 --FNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVN 307
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI+ Y+KCG ++ A +F + + A SWT++I G+AM+G +A+ LF++M K
Sbjct: 308 NALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIK 367
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD ITFI +L ACSH GLVD G +F+ M Y I+P +EHYGC++DL GRAG L +A +
Sbjct: 368 PDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYD 427
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
+ ++P N+I+ + LL AC I+GN+ + ++ L +++ ++S H LL+NIYA
Sbjct: 428 FVCQMPISPNDIV---WRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAV 484
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP-------SHSEMKEIYSM 592
A +W+DV +R+ M ++K PG S IE+N II+ F+ G+ +H +++EI S
Sbjct: 485 AGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSR 544
Query: 593 L 593
L
Sbjct: 545 L 545
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 210/641 (32%), Positives = 335/641 (52%), Gaps = 100/641 (15%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKS------LLLFSKLRERGVSPDNF 89
G++ + F I + +N +I A+ G F ++ LLL S++R PD +
Sbjct: 165 GDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIR-----PDFY 219
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+P V KA G L + G ++H + K G +++ +V S++ MY G + LFD+M
Sbjct: 220 TFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 276
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
P +D+ SWN ISG ++ A+DV MR +G + + TVVS L C L ++
Sbjct: 277 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM--NFVTVVSILPVCPQLGDIST 334
Query: 209 GKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY-- 265
IH Y I LEF + NAL++MY K G L +AR+ F +M +V+ W S+++ Y
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ 394
Query: 266 ---------------VNCGQ------------LEKARDLFDRSPVR-----------DIV 287
+N Q + ++RD + V D+V
Sbjct: 395 NDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV 454
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLK----------------------------- 318
+ A+++ Y + D A +F +II +K
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVF---EIILVKDVISWNTLITGYAQNGLASEAIEVYKMME 511
Query: 319 ------PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
P++ V++L A +GAL+QG IHG + + + +D VAT LI++Y KCG +
Sbjct: 512 ECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 571
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
A+ +FY++ ++ + +W +II ++G K L+LF +M+ G KPD +TF+ +LSAC
Sbjct: 572 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 631
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SH G V+EG+ F M E Y I+P L+HYGC++DLLGRAG L+ A I+ +P + + I
Sbjct: 632 SHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASI 690
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+GALL ACRI+GN+++G+ + L +++SK+ ++ LL+NIYA+ +WE V VR
Sbjct: 691 ---WGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+E G++K PG S+IE+N + F G+ SH + KEIY L
Sbjct: 748 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEEL 788
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 254/587 (43%), Gaps = 98/587 (16%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER-------- 82
THP NL A + I +P L + + K + R+ + LFS R
Sbjct: 58 THPFSTNLTLASARWRHILAPTLKSRHT-SKFLPPR---RRPIQLFSAARSSPQFSSYGL 113
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV 142
G + + F+F + + + +H +V G ++ ++++Y LG +
Sbjct: 114 GNQNEEIDFNFLFDSST---KTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLS 170
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
+ FD++P KDV +WN IS +V F +A+ F ++ + PD T L AC
Sbjct: 171 RCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT 230
Query: 203 LKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L + G+ IH + ++ + +L+ MY + G AR LFD+MP +++ W +M
Sbjct: 231 LVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAM 287
Query: 262 VSGYVNCGQLEKARDLFDRS----------------PV---------------------- 283
+SG + G +A D+ D PV
Sbjct: 288 ISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL 347
Query: 284 -RDIVLWTAMINGYVQFNRFDEAVALFRE------------------------------- 311
D+ + A+IN Y +F ++A F++
Sbjct: 348 EFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVK 407
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCG 370
MQ+ +PD LV+L + AQ + + +HG+I + D V+ A+++MYAK G
Sbjct: 408 MQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLG 467
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVL 429
L++ A ++F + KD SW ++I G A NG ++A+E++ M P+ T++ +L
Sbjct: 468 LLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 527
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
A +H G + +G R + + + + CLID+ G+ G L +A L ++P E++
Sbjct: 528 PAYAHVGALQQGMRIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 586
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAA--LLEKIESKDSSFHTLLA 534
+ A++S I+G+ + KL L E ++ +F +LL+
Sbjct: 587 VT----WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLS 629
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/514 (36%), Positives = 277/514 (53%), Gaps = 38/514 (7%)
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK-LFDEMPDK---DVVSWNVSISGH 164
++H +++K GL + V + ++ LF D D +N I +
Sbjct: 47 QIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAY 106
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFT 223
+ +D + ++P++ T L AC L+ L LG+ +H + +
Sbjct: 107 AQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCD 166
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ N ++ MY C G + AR +FD P
Sbjct: 167 IHVQNTMVHMYSCCA------------------------------GGINSARKVFDEMPK 196
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
D V W+AMI GY + R EAVALFREMQ+ + PD+ +V++L+ C LGALE GKWI
Sbjct: 197 SDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWI 256
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
YI + I V+ ALI+M+AKCG I KAL++F + EK SWTS+I G+AM+G+
Sbjct: 257 EAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRG 316
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
+A LF +M S G PDD+ FIG+LSACSH GLV+ GR +F +M + Y++ PK+EHYGC
Sbjct: 317 QEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGC 376
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++D+ R GL+ EA E +R +P E N +I+ L+SACR +G +GEK+ LL K E
Sbjct: 377 MVDMYCRTGLVKEALEFVRNMPIEPNPVIL---RTLVSACRGHGEFKLGEKITKLLMKHE 433
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
S + LL+NIYA WE T +R+ M+ G++KVPG + IEI+ I+EF+ GD SH
Sbjct: 434 PLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSH 493
Query: 584 SEMKEIYSMLDRMAKTLLDSKQNAMEGDNLVAIN 617
+ KEIY M+D M + + S + L+ IN
Sbjct: 494 KQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDIN 527
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 196/387 (50%), Gaps = 46/387 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT--HPSHGNLLYAEKIFGSIQSPCLL---- 54
+ +L QI I ++GL NP L K + H + YA S ++ L
Sbjct: 42 LPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATD----YAASFLFSAEADTRLYDAF 97
Query: 55 AYNLLIKAFAKKGSFR-KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+N LI+A+A+ G + K+L L+ + + P+ FTYPFV KA L + G+ VHG
Sbjct: 98 LFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGS 157
Query: 114 VVKTGLEFDTYVCNSIMDMYG-VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
VVK G + D +V N+++ MY G I + +K+FDEMP D V+W+ I G+ + R +
Sbjct: 158 VVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTE 217
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALL 231
AV +FR M Q + PDE T+VS LSACT L LELGK I YI + P+ + NAL+
Sbjct: 218 AVALFREM-QMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALI 276
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
DM+ KCG +S+A +LF M K ++ WTS++ G G
Sbjct: 277 DMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHG---------------------- 314
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
R EA LF EM + PD + LL+ C+ G +E+G+ G + +
Sbjct: 315 ---------RGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKY 365
Query: 352 ITVDAVVATA-LIEMYAKCGLIEKALE 377
V + +++MY + GL+++ALE
Sbjct: 366 KLVPKIEHYGCMVDMYCRTGLVKEALE 392
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 4/240 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + + ++ +I +A+ G +++ LF +++ V PD T +
Sbjct: 182 GGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSML 241
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG ++ G+ + Y+ + + V N+++DM+ G I KLF M +K +V
Sbjct: 242 SACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIV 301
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW I G R ++A +F M + PD+ + LSAC+ +E G+E
Sbjct: 302 SWTSVIVGMAMHGRGQEATCLFEEMTSS-GVAPDDVAFIGLLSACSHSGLVERGREYFGS 360
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE 272
+ ++ + P + + ++DMYC+ G + EA E MP N + ++VS G+ +
Sbjct: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 317/545 (58%), Gaps = 39/545 (7%)
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG----K 138
G SP + +P + ++ ++H +K+G DT I+
Sbjct: 12 GNSPASSLFP----QINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRD 67
Query: 139 ICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED----AVDVFRRMRQGCNLMPDEGTVV 194
+ K+F++MP ++ SWN I G + ED A+ +F M + P+ T
Sbjct: 68 LDYAHKIFNQMPQRNCFSWNTIIRGFSES--DEDKALIAITLFCEMMSDEFIEPNRFTFP 125
Query: 195 STLSACTALKNLELGKEIH----RYINQELEFTPIMGNALLDMYCKCGCLSEARELF--- 247
S L AC ++ GK+IH +Y EF +M N L+ MY CG + +A LF
Sbjct: 126 SVLKACAKTGKIQQGKQIHGLALKYGFGGDEF--VMSN-LVRMYVICGLMKDACVLFYKN 182
Query: 248 ---DEM--------PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
EM + V+ W M+ GY+ G + AR LFD+ R +V W MI+GY
Sbjct: 183 IIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 242
Query: 297 VQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Q F +AV +FREM+ ++P+ LV++L ++LG+LE G+W+H Y ++ I +D
Sbjct: 243 SQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRID 302
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V+ +ALI+MY+KCG+IEKA+ +F L ++ +W+++I G A++G+ A++ F +M
Sbjct: 303 DVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 362
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G +P D+ +I +L+ACSH GLV+EGRR+F+ M V ++P++EHYGC++DLLGR GLLD
Sbjct: 363 AGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLD 422
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EAEE I +P + +++I + ALL ACR++ NV+MG+++A +L + DS + L+N
Sbjct: 423 EAEEFILNMPIKPDDVI---WKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSN 479
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
+YAS W +V+ +R +MKEM +RK PGCS I+I+G++HEFLV D SH KEI SML
Sbjct: 480 MYASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVE 539
Query: 596 MAKTL 600
++ L
Sbjct: 540 ISDKL 544
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 221/483 (45%), Gaps = 94/483 (19%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPS--HGNLLYAEKIFGSIQSPCLLAYNLLIK 61
L QI A + G ++ +++ FC H +L YA KIF + ++N +I+
Sbjct: 32 LSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 91
Query: 62 AFAKKGSFRK--SLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
F++ + ++ LF ++ + + P+ FT+P V KA G++++G+++HG +K G
Sbjct: 92 GFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYG 151
Query: 119 LEFDTYVCNSIMDMYGV------------------------------------------- 135
D +V ++++ MY +
Sbjct: 152 FGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGY 211
Query: 136 --LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
LG + LFD+M + VVSWN ISG+ + F+DAV+VFR M++G ++ P+ T+
Sbjct: 212 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTL 271
Query: 194 VSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
VS L A + L +LELG+ +H Y + ++G+AL+DMY KCG + +A +F+ +P
Sbjct: 272 VSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPR 331
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDR--------SPVRDIVLWTAMIN-GYVQFNR-- 301
+NVI W++M++G+ GQ A D F + S V I L TA + G V+ R
Sbjct: 332 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRY 391
Query: 302 FDEAVAL-FREMQI-------------------------IRLKPDKFILVALLTGCAQLG 335
F + V++ E +I + +KPD I ALL C
Sbjct: 392 FSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMHR 451
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD-----AASW 390
+E GK + I + + D+ AL MYA G + E+ ++E D SW
Sbjct: 452 NVEMGKRV-ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSW 510
Query: 391 TSI 393
I
Sbjct: 511 IDI 513
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 324/611 (53%), Gaps = 50/611 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q AQI G QN +L+ + + G L + +F S+++ + +N LI +
Sbjct: 48 QQSHAQILANGFAQNAFLATRLV--SAYATCGELATSRFVFESVEAKSVYLWNSLINGYV 105
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K FR++L LF ++ G+ PD++T VFK G L ++ G+ +HG ++ G D
Sbjct: 106 KNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVV 165
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG-----HVKCMRFEDAVDVFRR 179
V NS+M MY G+ + K+FDE P ++V S+NV ISG + +D + F R
Sbjct: 166 VGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALENCNFTSHDDLSNFFLR 225
Query: 180 MRQGCNLMPDEGTVVSTLSACTA-LKNLELGKEIHRYI-----NQELEFTPIMGNALLDM 233
M Q D TV S L C + G+E+H Y+ + +++ +G++L+DM
Sbjct: 226 M-QCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSDVHLGSSLIDM 284
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y + + R +FD+M N R++ +WTAMI
Sbjct: 285 YSRSKKVVLGRRVFDQMKN-------------------------------RNVYVWTAMI 313
Query: 294 NGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
NGYVQ D+A+ L R MQ+ ++P+K L++ L C L L GK IHG+ + +
Sbjct: 314 NGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMEL 373
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELRE-KDAASWTSIICGLAMNGKINKALELFS 411
D + ALI+MY+KCG ++ A F KDA +W+S+I ++G+ +A+ +
Sbjct: 374 NDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYY 433
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+M+ G KPD IT +GVLSACS GLVDEG + ++ Y+I+P +E C++D+LGR+
Sbjct: 434 KMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRS 493
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G LD+A E I+++P + + +G+LL+A I+GN + L ++E ++ S +
Sbjct: 494 GQLDQALEFIKEMPLDPGPSV---WGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYI 550
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
L+N YAS RW+ VT VR MKE G++KVPGCS I I+G H F V D +H IY
Sbjct: 551 SLSNTYASDRRWDVVTEVRTIMKERGLKKVPGCSWITISGKTHSFSVADKAHPSSSLIYE 610
Query: 592 MLDRMAKTLLD 602
ML + + D
Sbjct: 611 MLGDLVSIMTD 621
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 190/412 (46%), Gaps = 42/412 (10%)
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K ++ H ++ G + ++ ++ Y G++ + +F+ + K V WN I+G+
Sbjct: 45 KLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVEAKSVYLWNSLINGY 104
Query: 165 VKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
VK F A+ +FR M R G ++PD+ T+ + L++L GK IH + I
Sbjct: 105 VKNHDFRQALALFREMGRNG--MLPDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVS 162
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
++GN+L+ MYC+CG +A ++FDE P++NV + ++SG C LE
Sbjct: 163 DVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISG---CAALENC-------- 211
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL-TGCAQLGALEQGK 341
F D+ F MQ K D F + +LL C G + G+
Sbjct: 212 ---------------NFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGR 256
Query: 342 WIHGYINEN----RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
+H Y+ +N ++ D + ++LI+MY++ + +F +++ ++ WT++I G
Sbjct: 257 ELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGY 316
Query: 398 AMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACS-HGGLVDEGRRFFNTMTEVYQIQ 455
NG + AL L M + G +P+ ++ I L AC GL+ G + + + ++
Sbjct: 317 VQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLI--GGKQIHGFSIKMELN 374
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
+ LID+ + G LD A + I + +++SA ++G
Sbjct: 375 DDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAIT---WSSMISAYGLHG 423
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%)
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
L+ LL C L + + + H I N +A +AT L+ YA CG + + +F +
Sbjct: 31 LLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVE 90
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
K W S+I G N +AL LF +M G PDD T V
Sbjct: 91 AKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVF 136
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 316/600 (52%), Gaps = 42/600 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A + ++G ++ T N L+ + G + A IF + ++++N LI
Sbjct: 222 RQVHAMVVRMGYDKDVFTANALVDM--YMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
G +++ L +++ G+ P+ FT + KA G G ++HG+++K + D Y
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++DMY + + +K+FD M +D++ N ISG R ++A+ +F +R+
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKE- 398
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
L + T+ + L + +L+ +++H + F + N L+D Y KC CLS+A
Sbjct: 399 GLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+ F+ DI+ T+MI Q + +
Sbjct: 459 NRV-------------------------------FEECSSGDIIACTSMITALSQCDHGE 487
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ LF EM L+PD F+L +LL CA L A EQGK +H ++ + + DA AL+
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
YAKCG IE A F L E+ SW+++I GLA +G +ALELF +M+ G P+ I
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T VL AC+H GLVDE +R+FN+M E++ I EHY C+IDLLGRAG LD+A EL+
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + N I +GALL A R++ + ++G+ A L +E + S H LLAN YASA W
Sbjct: 668 MPFQANASI---WGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMW 724
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML----DRMAKT 599
+V VR+ MK+ ++K P S IE+ +H F+VGD SH KEIY+ L D M+K
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKA 784
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 195/395 (49%), Gaps = 37/395 (9%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A + F I PC ++++ L+ A++ G R ++ F +R GV + F P V K V
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP- 114
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM-PDKDVVSWNV 159
+ + G +VH + TG D +V N+++ MYG G + + +++F+E +++ VSWN
Sbjct: 115 --DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNG 172
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQ 218
+S +VK + DA+ VF M + P E ++ACT +N+E G+++H +
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRM 231
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
+ NAL+DMY K G + A +F++MP+ +V+ W +++SG V
Sbjct: 232 GYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV------------ 279
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
+NG+ A+ L +M+ L P+ F L ++L C+ GA +
Sbjct: 280 --------------LNGHDH-----RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ IHG++ + D + L++MYAK ++ A ++F + +D ++I G +
Sbjct: 321 LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCS 380
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
G+ ++AL LF ++ G + T VL + +
Sbjct: 381 HGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 219/482 (45%), Gaps = 37/482 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP-CLLAYNLLIKAFA 64
Q+ A G + N L+ + G + A ++F S +++N L+ A+
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K ++ +F ++ G+ P F + V A ++ G +VH VV+ G + D +
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
N+++DMY +G++ +F++MPD DVVSWN ISG V A+++ +M+
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYS- 297
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
L+P+ T+ S L AC+ +LG++IH + I + +G L+DMY K L +A
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R++FD M + RD++L A+I+G R D
Sbjct: 358 RKVFDWMFH-------------------------------RDLILCNALISGCSHGGRHD 386
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA++LF E++ L ++ L A+L A L A + +H + DA V LI
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ Y KC + A +F E D + TS+I L+ A++LF +M+ G +PD
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
+L+AC+ ++G++ + + Q L+ + G +++AE
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 484 IP 485
+P
Sbjct: 566 LP 567
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 190/449 (42%), Gaps = 50/449 (11%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G +H ++K+G ++ N ++ Y + C ++ FDE+PD VSW+ ++ +
Sbjct: 23 GAHLHASLLKSG-SLASFR-NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK---NLELGKEIHRY-INQELEF 222
A+ F MR EG + + LK + LG ++H +
Sbjct: 81 NGLPRSAIQAFHGMRA-------EGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGS 133
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NAL+ MY G + +AR +F+E ++
Sbjct: 134 DVFVANALVAMYGGFGFMDDARRVFNEADSE----------------------------- 164
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R+ V W +++ YV+ ++ +A+ +F EM ++P +F ++ C +E G+
Sbjct: 165 -RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ 223
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H + D A AL++MY K G ++ A IF ++ + D SW ++I G +NG
Sbjct: 224 VHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 283
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
++A+EL QM G P+ T +L ACS G D GR+ M + G
Sbjct: 284 DHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG 343
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
L+D+ + LD+A RK+ + + L AL+S C G D E L+ E
Sbjct: 344 -LVDMYAKNHFLDDA----RKVFDWMFHRDLILCNALISGCSHGGRHD--EALSLFYELR 396
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQ 551
+ T LA + S E + RQ
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASTTRQ 425
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 315/565 (55%), Gaps = 41/565 (7%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
Y + + +P ++N+ ++ FA R +L L ++ + PD +T PF+ A
Sbjct: 84 YVHLLLTAHPTPTAFSFNVALRFFAASRP-RTTLQLSLRMLRAALRPDAYTLPFLLLAAA 142
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
H + K GL + +S++ MY LG+ +++FD + +DVVSWN
Sbjct: 143 RCPAPAFAASAHALLQKLGLHNHDHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNS 202
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ- 218
I + +DA +FR M + P+ TV L+AC +L LG+ + ++
Sbjct: 203 MIKAYQAAGMKDDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSV 262
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
+E ++G+AL+ MY KCG ++EAR +FD + +K+ + W ++++GY G +
Sbjct: 263 GMEVGSLVGSALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSK------ 316
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
EA++LF M+ +PDK LV +L+ CA +GALE
Sbjct: 317 -------------------------EAISLFHSMRQAGARPDKITLVGVLSACAAVGALE 351
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G + Y + + V TAL++MY+KCG + +A+++F +L K+ ASW ++ICGLA
Sbjct: 352 LGTELDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPCKNEASWNALICGLA 411
Query: 399 MNGKINKALELFSQMISG-GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
NG+ +A+ F M G +PDDITFIGVLSAC H GL+ +GRR+F+++T +QI PK
Sbjct: 412 FNGRGQEAIRQFELMRKQEGLRPDDITFIGVLSACVHAGLLKDGRRWFDSLTSEFQIIPK 471
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
+EHY C++DLL RAG L+EA + I KIP + + +++ GALL+ACR NV++ ++
Sbjct: 472 IEHYSCMVDLLARAGHLEEAWDFIEKIPGKPDAVML---GALLAACRKCKNVEVSVRVIN 528
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
+ +E +S + + + IYAS++R +D +R M+E GV K+PGCS IE++G + EF
Sbjct: 529 KIMLLEPSNSWNYVVSSKIYASSDRLDDSARMRGLMRERGVSKIPGCSWIEVSGRVLEFY 588
Query: 578 VGDPSHSEMKEIYSMLDRMAKTLLD 602
GD ++++Y +LD TL+D
Sbjct: 589 AGDEPQHGVEDMYQLLD----TLVD 609
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 184/383 (48%), Gaps = 44/383 (11%)
Query: 13 QIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKS 72
++GL + T++ L+ + + G A ++F I ++++N +IKA+ G +
Sbjct: 159 KLGLHNHDHTVHSLVTM--YSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDA 216
Query: 73 LLLFSKLRERGVSPDNFTYPFVFKAVGW-LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMD 131
+F + G P N V A G++ G + +V G+E + V ++++
Sbjct: 217 ARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVG 276
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
MY G++ +++FD + KD V+WN I+G+ + ++A+ +F MRQ PD+
Sbjct: 277 MYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQA-GARPDKI 335
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEM 250
T+V LSAC A+ LELG E+ RY Q ++ + +G AL+DMY KCG L+ A ++F+++
Sbjct: 336 TLVGVLSACAAVGALELGTELDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQVFEKL 395
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
P KN W +++ G G+ ++A R
Sbjct: 396 PCKNEASWNALICGLAFNGRGQEA----------------------------------IR 421
Query: 311 EMQIIR----LKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEM 365
+ +++R L+PD + +L+ C G L+ G +W +E +I + ++++
Sbjct: 422 QFELMRKQEGLRPDDITFIGVLSACVHAGLLKDGRRWFDSLTSEFQIIPKIEHYSCMVDL 481
Query: 366 YAKCGLIEKALEIFYELREKDAA 388
A+ G +E+A + ++ K A
Sbjct: 482 LARAGHLEEAWDFIEKIPGKPDA 504
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/486 (36%), Positives = 287/486 (59%), Gaps = 40/486 (8%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H +++ G D ++ ++ I ++F + +V + I G V
Sbjct: 51 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGN 228
+ DA+ ++ RM +++PD + S L AC + L G+E+H R + L ++
Sbjct: 111 YFDAIQLYSRMLHD-SILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRL 169
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP----VR 284
++++Y KCG +L AR +F+ P +
Sbjct: 170 RIMELYGKCG-------------------------------ELGDARRVFEEMPEDVVAK 198
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
D V WTAMI+G+V+ + A+ FR MQ ++P++F +V +L+ C+QLGALE G+W+H
Sbjct: 199 DTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVH 258
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
Y+ + I ++ V ALI MY++CG I++A +F E++++D ++ ++I GL+MNGK
Sbjct: 259 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSR 318
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+A+ELF MI +P ++TF+GVL+ACSHGGLVD G + F++MT Y ++P++EHYGC+
Sbjct: 319 QAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCM 378
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGR G L+EA +LIR + + I++ G LLSAC+++ N+++GE++A +LE
Sbjct: 379 VDLLGRVGRLEEAYDLIRTMKMTPDHIML---GTLLSACKMHKNLELGEQVAKVLEDRGQ 435
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
DS + LL+++YAS+ +W++ VR KMKE G++K PGCSSIE+N IHEFL+GD H
Sbjct: 436 ADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHP 495
Query: 585 EMKEIY 590
+ IY
Sbjct: 496 RKERIY 501
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 216/429 (50%), Gaps = 52/429 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+ I AQ+ + G Q+P + +L+ C+ H + YA +IF +P + Y LI
Sbjct: 45 INQVLPIHAQLIRNGHSQDPFMVFELLRSCS-KCHA-IDYASRIFQYTHNPNVYLYTALI 102
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F G++ ++ L+S++ + PDN+ + KA G +++G +VH +K GL
Sbjct: 103 DGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLS 162
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPD----KDVVSWNVSISGHVKCMRFEDAVDV 176
+ V IM++YG G++ + +++F+EMP+ KD V W I G V+ A++
Sbjct: 163 SNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEA 222
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYC 235
FR M QG N+ P+E T+V LSAC+ L LE+G+ +H Y+ + E+E +GNAL++MY
Sbjct: 223 FRGM-QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 281
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD---------------- 279
+CG + EA+ +FDEM +++VI + +M+SG G+ +A +LF
Sbjct: 282 RCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVG 341
Query: 280 ------------------RSPVRD------IVLWTAMINGYVQFNRFDEAVALFREMQII 315
S RD I + M++ + R +EA L R M
Sbjct: 342 VLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM--- 398
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
++ PD +L LL+ C LE G+ + + E+R D+ L +YA G ++A
Sbjct: 399 KMTPDHIMLGTLLSACKMHKNLELGEQV-AKVLEDRGQADSGTYVLLSHVYASSGKWKEA 457
Query: 376 LEIFYELRE 384
++ +++E
Sbjct: 458 AQVRAKMKE 466
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
II L + IN+ L + +Q+I G D +L +CS +D R F Y
Sbjct: 35 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ-----Y 89
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNV 509
P + Y LID +G +A +L ++ +++ I+P L ++L AC +
Sbjct: 90 THNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDS---ILPDNYLMASILKACGSQLAL 146
Query: 510 DMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
G ++ + K+ S + + +Y D V ++M E V K C +
Sbjct: 147 REGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 206
Query: 569 INGII 573
I+G +
Sbjct: 207 IDGFV 211
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/449 (38%), Positives = 273/449 (60%), Gaps = 9/449 (2%)
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT---ALKNLELGK 210
VSW SIS H K F A F +M + + P+ T+++ LSAC + ++ G
Sbjct: 52 TVSWTSSISHHCKNNNFLKAASEFIQMLEA-EVEPNHITLITLLSACAHSPSKTSITFGA 110
Query: 211 EIHRY-INQELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+H + +M G AL+DMY KCG L AR +FD+M +N++ W +M+ GY+
Sbjct: 111 ALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKN 170
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G ++ A LFD+ PV+++V WT +I G+V+ ++EA+ FREMQ+ + PD ++A++
Sbjct: 171 GDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAII 230
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+ CA LGAL G W+H + + + V +LI+MYA+CG IE A ++F + +++
Sbjct: 231 SACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLV 290
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
SW SII G A+NG +KAL F M G +P+ +++ L+ACSH GL+DEG + F +
Sbjct: 291 SWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADI 350
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
++ P++EHYGCL+DL RAG L EA ++I+K+P NE+++ G+LL+ACR G+
Sbjct: 351 KRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVL---GSLLAACRTQGD 407
Query: 509 VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
V++ EK+ ++ S + L +NIYA+ +W+ + VR++MKE G++K SSIE
Sbjct: 408 VELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIE 467
Query: 569 INGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
I+ IH+F+ GD H E IYS L+ ++
Sbjct: 468 IDSGIHKFVSGDKYHEENDYIYSALELLS 496
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 137/258 (53%), Gaps = 34/258 (13%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++D Y G + + KLFD++P K+VVSW V I G VK +E+A++ FR M Q +
Sbjct: 161 NTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREM-QLAGV 219
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARE 245
+PD TV++ +SAC L L LG +HR + +E + N+L+DMY +CGC+ AR+
Sbjct: 220 VPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQ 279
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+FD M +N++ W S++ G+ +NG D+A
Sbjct: 280 VFDGMSQRNLVSWNSIIVGFA--------------------------VNGLA-----DKA 308
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN-ENRITVDAVVATALIE 364
++ FR M+ L+P+ + LT C+ G +++G I I ++R + L++
Sbjct: 309 LSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVD 368
Query: 365 MYAKCGLIEKALEIFYEL 382
+Y++ G +++A ++ ++
Sbjct: 369 LYSRAGRLKEAWDVIKKM 386
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 142/289 (49%), Gaps = 15/289 (5%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G++ A K+F + ++++ ++I F KK + ++L F +++ GV PD T +
Sbjct: 170 NGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAI 229
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + G VH V+K + V NS++DMY G I +++FD M +++
Sbjct: 230 ISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNL 289
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSWN I G + A+ FR M++ L P+ + S L+AC+ ++ G +I
Sbjct: 290 VSWNSIIVGFAVNGLADKALSFFRSMKKE-GLEPNGVSYTSALTACSHAGLIDEGLKIFA 348
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
I ++ +P + + L+D+Y + G L EA ++ +MP N + S+++ G +
Sbjct: 349 DIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDV 408
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFN-------RFDEAVALFREMQ 313
E A + + L+ + YV F+ ++D A + REM+
Sbjct: 409 ELAEKVMKYQ----VELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMK 453
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+ L + ++ SWTS I N KA F QM+ +P+ IT I +LSAC+
Sbjct: 39 QTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACA 98
Query: 434 H 434
H
Sbjct: 99 H 99
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 314/565 (55%), Gaps = 40/565 (7%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ A + +IG + ++ L+ F + + ++ A K+F + ++++ L+I AFA+
Sbjct: 144 VHALVQRIGFASDLFVMSGLINF--YGASKSVEDARKVFEEMHERDVVSWTLMISAFAQC 201
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G + L +++ G P+ T + A G + V KG V+ V + G+E D +
Sbjct: 202 GQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIR 261
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++ MY G + + K F MP ++ SWN I G V+ + ++A+ +F M +
Sbjct: 262 NALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSD-GV 320
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARE 245
+PD T+VS LS L +L+ G+ +H YI + E+ I+ N+L++MY KCG ++ A
Sbjct: 321 IPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEI 380
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+F+ M ++++ WT+MV GYV Q A +LFD VRD++
Sbjct: 381 IFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVM------------------ 422
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM 365
+ LV+LL+ C+QLGAL++G+ IH YI E + D + +AL++M
Sbjct: 423 -------------ASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDM 469
Query: 366 YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDIT 424
YAKCG I+ A EIF +R K +W ++I GLA G+ +A+ LF Q++ KPD IT
Sbjct: 470 YAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAIT 529
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
VL AC+H G+VDEG +FN M + I P EHYGC++DLLGRAGLLDEA I+K+
Sbjct: 530 LKVVLCACTHVGMVDEGLHYFNLMLTL-GIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKM 588
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
P + N +I +G+LL+ACR++ +++G+ + + + D H L++N++A +W+
Sbjct: 589 PIQPNPVI---WGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHVLISNLHAEEGQWD 645
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEI 569
DV VR M V K PG SSI++
Sbjct: 646 DVEQVRGMMGSRRVEKSPGHSSIQV 670
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 261/527 (49%), Gaps = 47/527 (8%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHP-SHGNLLYAEKIFGSIQSPCLLAYNLLI 60
L ++ ++ + L +P +L+ P S ++ YA K+F + P + +N +I
Sbjct: 32 ANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMI 91
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA----VGWLGEVKKGEKVHGYVVK 116
+ + + +L LF +R GVSPDN+T V ++ W G G+ VH V +
Sbjct: 92 RGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRAT-GDAVHALVQR 150
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G D +V + +++ YG + + +K+F+EM ++DVVSW + IS +C ++++ +
Sbjct: 151 IGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRS 210
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYC 235
M Q P++ T++S LSAC ++ ++ G ++ +++ +E + NAL+ MY
Sbjct: 211 LDEM-QSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYV 269
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCGC+S+A + F MP +N W +++ G+V G
Sbjct: 270 KCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNG-------------------------- 303
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+ EA+ +F EM + PD LV++L+ AQLG L+QG+++H YI ++ I D
Sbjct: 304 -----KHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCD 358
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
++ +LI MYAKCG + A IF + +D SWT+++CG + A LF M
Sbjct: 359 IILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKV 418
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
++ + +LSACS G +D+GR + + E ++ + L+D+ + G +D
Sbjct: 419 RDVMASEMALVSLLSACSQLGALDKGREIHSYIKE-KSVRTDMWLESALVDMYAKCGCID 477
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
A E+ ++ ++ + G L S + G++ AL E++
Sbjct: 478 AAAEIFSRMRHKQTLAWNAMIGGLASQGQ-------GKEAVALFEQL 517
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 295/543 (54%), Gaps = 38/543 (6%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
++N ++ A++ F+++L L+ ++ G SP+ FT+PF FK+ L G ++HG+V
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD--VVSWNVSISGHVKCMRFED 172
+KTG E + +V S++ MY I + +K+FDE V +N I+G+ RF D
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALL 231
AV +FR+MR+ + + T++ + C +L G +H + L+ +GN LL
Sbjct: 143 AVLLFRQMRKE-GVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
MY V CG ++ AR LFD P + ++ W A
Sbjct: 202 TMY-------------------------------VRCGSVDFARKLFDGMPEKGLITWNA 230
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
MI+GY Q + L+R+M+ + PD LV +L+ CA LGA G+ + I +
Sbjct: 231 MISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSG 290
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ + ALI MYA+CG + KA IF + EK+ SWT+II G M+G+ A++LF
Sbjct: 291 FGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFD 350
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
+MIS PD F+ VLSACSH GL ++G +F M Y +QP EHY C++DLLGRA
Sbjct: 351 EMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRA 410
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G L+EA +LI + E + + +GALL AC+I+ NV++ E + + E + ++
Sbjct: 411 GRLEEARKLIGSMSVEPDGAV---WGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYV 467
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LL+NI++ A E + VR M+E ++K PGCS +E G IH FL GD +H + +EIY
Sbjct: 468 LLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYH 527
Query: 592 MLD 594
MLD
Sbjct: 528 MLD 530
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 204/432 (47%), Gaps = 43/432 (9%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLA--YNLLIK 61
Q+ + + G + P L+ ++C + + A K+F LA YN LI
Sbjct: 76 SQLHGHVIKTGCEPEPFVQTSLISMYCKCST---IASARKVFDENHHSRNLAVCYNALIA 132
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
++ F ++LLF ++R+ GVS + T + + G +H V+ GL+
Sbjct: 133 GYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDG 192
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D V N ++ MY G + +KLFD MP+K +++WN ISG+ + +D++R+M
Sbjct: 193 DLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKM- 251
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCL 240
+ ++PD T+V LS+C L G+E+ + I F P + NAL++MY +CG L
Sbjct: 252 EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNL 311
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR +FD M KNVI WT++++GY GQ E A LFD MI+
Sbjct: 312 VKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDE-----------MISS----- 355
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVA 359
DE PD V++L+ C+ G E+G + + + +
Sbjct: 356 --DEL-------------PDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHY 400
Query: 360 TALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+ ++++ + G +E+A ++ + E D A W +++ ++ + A F ++I
Sbjct: 401 SCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIE--F 458
Query: 419 KPDDITFIGVLS 430
+P +I + +LS
Sbjct: 459 EPTNIGYYVLLS 470
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 206/631 (32%), Positives = 333/631 (52%), Gaps = 74/631 (11%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL---LAYNLLIKAFAKKGSFRK 71
G + N N L+ + G+L A IF I + +++N ++ A K +
Sbjct: 192 GFESNVFICNALVAM--YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT 249
Query: 72 SLLLFSKL------RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+L LFSK+ + D + + A G L V + ++VHG ++ G D +V
Sbjct: 250 ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFV 309
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ--- 182
N+++D Y G + N K+F+ M KDVVSWN ++G+ + FE A ++F+ MR+
Sbjct: 310 GNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENI 369
Query: 183 -----------------GC-----NL---------MPDEGTVVSTLSACTALKNLELGKE 211
GC NL +P+ T++S LSAC +L G E
Sbjct: 370 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 429
Query: 212 IHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
IH Y + N LL + G E +++ + +++ Y C
Sbjct: 430 IHAYS---------LKNCLLTLDNDFGGEDE-----------DLMVYNALIDMYSKCRSF 469
Query: 272 EKARDLFDRSPV--RDIVLWTAMINGYVQFNRFDEAVALFREM--QIIRLKPDKFILVAL 327
+ AR +FD P+ R++V WT MI G+ Q+ ++A+ LF EM + + P+ + + +
Sbjct: 470 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 529
Query: 328 LTGCAQLGALEQGKWIHGYI-NENRITVDA-VVATALIEMYAKCGLIEKALEIFYELREK 385
L CA L A+ GK IH Y+ +R A VA LI+MY+KCG ++ A +F + +K
Sbjct: 530 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 589
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
A SWTS++ G M+G+ ++AL++F +M G PDDITF+ VL ACSH G+VD+G +F
Sbjct: 590 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 649
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
++M+ Y + P+ EHY C IDLL R+G LD+A ++ +P E ++ + ALLSACR+
Sbjct: 650 DSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV---WVALLSACRV 706
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ NV++ E L ++ +++ +TL++NIYA+A RW+DV +R MK+ G++K PGCS
Sbjct: 707 HSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 766
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
++ F VGD SH +IY++L+ +
Sbjct: 767 WVQGQKGTASFFVGDRSHPLSPQIYALLESL 797
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 245/482 (50%), Gaps = 30/482 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G YA + + + +NLLI+ K+G ++ + ++ G PD+FT P V
Sbjct: 110 GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVL 169
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK--- 152
KA G L + G HG + G E + ++CN+++ MY G + +FDE+ +
Sbjct: 170 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 229
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRM-----RQGCNLMPDEGTVVSTLSACTALKNLE 207
DV+SWN +S HVK A+D+F +M + N D ++V+ L AC +LK +
Sbjct: 230 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 289
Query: 208 LGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
KE+H + F + +GNAL+D Y KCG + A ++F+ M K+V+ W +MV+GY
Sbjct: 290 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 349
Query: 267 NCGQLEKARDLF-----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
G E A +LF + P+ D+V WTA+I GY Q EA+ LFR+M P+
Sbjct: 350 QSGNFEAAFELFKNMRKENIPL-DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 408
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITV----------DAVVATALIEMYAKCGL 371
++++L+ CA LGA QG IH Y +N + D +V ALI+MY+KC
Sbjct: 409 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 468
Query: 372 IEKALEIFYE--LREKDAASWTSIICGLAMNGKINKALELFSQMISG--GAKPDDITFIG 427
+ A IF + L E++ +WT +I G A G N AL+LF +MIS G P+ T
Sbjct: 469 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 528
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAEELIRKIPN 486
+L AC+H + G++ + ++ + CLID+ + G +D A + +
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 588
Query: 487 EN 488
++
Sbjct: 589 KS 590
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
T +V+ Y+ CG + A + +R V W +I +++ R D A+ + M +
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
PD F L +L C +L + G HG I N + + AL+ MY++CG +E+A I
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 379 FYELREK---DAASWTSIICGLAMNGKINKALELFSQMI------SGGAKPDDITFIGVL 429
F E+ ++ D SW SI+ + AL+LFS+M + D I+ + +L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
AC V + + P + LID + GL++ A
Sbjct: 280 PACGSLKAVPQTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENA 326
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/197 (18%), Positives = 79/197 (40%), Gaps = 4/197 (2%)
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ T ++ Y CG + AL + + A W +I G+++ A+ + +M+ G
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+PD T VL AC G F + + + L+ + R G L+EA
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLIC-CNGFESNVFICNALVAMYSRCGSLEEA 216
Query: 478 EELIRKIPNENNEIIV---PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+ +I + ++ + A + + + +D+ K+ ++ + + + S +
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 276
Query: 535 NIYASANRWEDVTNVRQ 551
NI + + V ++
Sbjct: 277 NILPACGSLKAVPQTKE 293
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 321/573 (56%), Gaps = 40/573 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A ++F + A+N +I A++++G+ ++L L+ ++ GV PD+ TY V
Sbjct: 53 GHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVL 112
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA +++ GE+ V G D +V +++++Y GK+ ++FD+M +D+V
Sbjct: 113 KACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLV 172
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
W I+G + + +AVD++R+M + + D ++ + ACT L + ++G IH Y
Sbjct: 173 CWTTMITGLAQNGQAREAVDIYRQMHKK-RVEGDGVVMLGLIQACTTLGHSKMGLSIHGY 231
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ I + ++D VI TS+V Y G LE A
Sbjct: 232 M--------IRKDIIMD----------------------VIVQTSLVDMYAKNGHLELAS 261
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+F R ++++ W+A+I+G+ Q A+ L +MQ KPD LV++L C+Q+G
Sbjct: 262 CVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVG 321
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
L+ GK +HGYI R+ D V +TA+I+MY+KCG + A +F ++ +D+ SW +II
Sbjct: 322 FLKLGKSVHGYI-VRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIA 380
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
++G +AL LF QM KPD TF +LSA SH GLV++GR +F+ M Y+IQ
Sbjct: 381 SYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQ 440
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P +HY C++DLL RAG ++EA+ELI + E + ++ ALLS C +G +GE
Sbjct: 441 PSEKHYACMVDLLSRAGRVEEAQELIESMITEPG---IAIWVALLSGCLNHGKFLIGEMA 497
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A + ++ D ++L++N +A+A RW++V VR+ MK+ G++KVPG S +E+NG +H
Sbjct: 498 AKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHA 557
Query: 576 FLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAM 608
FL+ D SH + +EI +L + LD + AM
Sbjct: 558 FLMEDKSHHQYEEIMQVLGK-----LDYEMKAM 585
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 149/294 (50%), Gaps = 10/294 (3%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ +G+L A +F + +++++ LI FA+ G +L L ++ G PD+ +
Sbjct: 251 YAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSL 310
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V A +G +K G+ VHGY+V+ L FD +++DMY G + + +FD++
Sbjct: 311 VSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISF 369
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+D +SWN I+ + E+A+ +F +MR+ N+ PD T S LSA + +E G+
Sbjct: 370 RDSISWNAIIASYGIHGSGEEALSLFLQMRE-TNVKPDHATFASLLSAFSHSGLVEKGRY 428
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNC 268
+ E + P + ++D+ + G + EA+EL + M + + W +++SG +N
Sbjct: 429 WFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNH 488
Query: 269 GQL----EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
G+ A+ + + +P D +++ + N + R+DE + + M+ +K
Sbjct: 489 GKFLIGEMAAKKVLELNP-DDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMK 541
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/415 (40%), Positives = 257/415 (61%), Gaps = 35/415 (8%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEA 243
NL PDE T+VS + AC L NLE GK +H Y + L+ + NA+LDMYCKC
Sbjct: 6 NLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCD----- 60
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+E A+++F+R +D++ WT+M++G + F
Sbjct: 61 --------------------------DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQ 94
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
E++ALFR+MQ+ +++PD+ LV +L+ CAQ GAL+QGK+IH I++ I D V+ TAL+
Sbjct: 95 ESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALV 154
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MYAKCG I+ AL++F +R ++ +W ++I GLAM+G A+ LF QM PDD+
Sbjct: 155 DMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDV 214
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFI +L ACSH GLVDEG F M +QI+P++EHYGC++DLL RA +D+A I
Sbjct: 215 TFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIEN 274
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + N + L+ LL ACR G+ D+ EK+ + ++E + +L+N+YA ++W
Sbjct: 275 MPIKANSV---LWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQW 331
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
+ +R++MK G+ K PGCS IE+NG+IH+F+ GD SH + ++IY+M++ M +
Sbjct: 332 DHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTR 386
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 132/258 (51%), Gaps = 33/258 (12%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
+ PD T + A LG +++G+ +H Y + GL+ + V N+I+DMY I + +
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
++F+ + +KDV+SW +SG K F++++ +FR+M Q + PDE T+V LSAC
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKM-QLHKIEPDEITLVGVLSACAQT 125
Query: 204 KNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
L+ GK IH I++ E+ ++ AL+DMY KCG + A ++F M +NV W +M+
Sbjct: 126 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMI 185
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
G G E +A++LF +M+ +L PD
Sbjct: 186 GGLAMHGHGE-------------------------------DAISLFDQMEXDKLMPDDV 214
Query: 323 ILVALLTGCAQLGALEQG 340
+ALL C+ G +++G
Sbjct: 215 TFIALLCACSHAGLVDEG 232
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 152/312 (48%), Gaps = 19/312 (6%)
Query: 13 QIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRK 71
++GL +N N ++ ++C ++ A+++F I+ +L++ ++ AK G F++
Sbjct: 39 ELGLDENLSVNNAILDMYC---KCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQE 95
Query: 72 SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMD 131
SL LF K++ + PD T V A G + +G+ +H + K + D + +++D
Sbjct: 96 SLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVD 155
Query: 132 MYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
MY G I ++F M ++V +WN I G EDA+ +F +M LMPD+
Sbjct: 156 MYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXD-KLMPDDV 214
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDE 249
T ++ L AC+ ++ G + + + + + P M + ++D+ C+ + +A +
Sbjct: 215 TFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIEN 274
Query: 250 MPNK-NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL-------WTAMINGYVQFNR 301
MP K N + W +++ + G DL ++ R I L + + N Y ++
Sbjct: 275 MPIKANSVLWATLLGACRSGGHF----DLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQ 330
Query: 302 FDEAVALFREMQ 313
+D A+ L ++M+
Sbjct: 331 WDHALKLRKQMK 342
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/502 (36%), Positives = 279/502 (55%), Gaps = 44/502 (8%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIM--DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++VH +V G D ++ GV G + + +FD +P D +N I G
Sbjct: 25 KQVHALMVLRGFLSDPSALRELIFASSVGVRGGTAHARLVFDRIPHPDRFMYNTLIRGAA 84
Query: 166 KCMRFEDAVDVFRRMRQ---GCN--LMPDEGTVVSTLSACTALKNLELGKEIHRYINQE- 219
DAV ++ RM + GC + PD+ T L AC A+ E G ++H ++ +
Sbjct: 85 HSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQVHAHVVKAG 144
Query: 220 LEFTPIMGNALLDMYCKCGCLSEA-------------------------------RELFD 248
E + NAL+ M+ CG L A RELFD
Sbjct: 145 CESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFD 204
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
E P K+++ W M++ Y G + AR+LFD +P RD+V W AMI+GYV+ +A+ L
Sbjct: 205 ESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMEL 264
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMY 366
F +MQ + KPD +++LL+ CA G ++ G+ +H +++ +RI V+ ALI+MY
Sbjct: 265 FEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIGPSTVLGNALIDMY 324
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKCG + ALE+F+ +++K+ ++W SII GLA++G + +A+++F +M+ G KPD+ITF+
Sbjct: 325 AKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVKPDEITFV 384
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
VL ACSHGG+VD+G +FN M + Y I+P ++HYGC++D+L RAGLL EA E I +
Sbjct: 385 AVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEFIGTMKI 444
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
E N +I + LL ACRI+G +++ E L K S S LL+NIYAS W
Sbjct: 445 EPNPVI---WRTLLGACRIHGELELAEHANQELLKARSDASGDFVLLSNIYASVGEWLGS 501
Query: 547 TNVRQKMKEMGVRKVPGCSSIE 568
N+R+ M + GV K GC+ ++
Sbjct: 502 ENMRKLMDDSGVNKEAGCAVVD 523
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 218/482 (45%), Gaps = 111/482 (23%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+KQ+ A + G +P L +L+ + G +A +F I P YN LI
Sbjct: 21 LRQIKQVHALMVLRGFLSDPSALRELIFASSVGVRGGTAHARLVFDRIPHPDRFMYNTLI 80
Query: 61 KAFAKKGSFRKSLLLFSKLRER------GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
+ A + R ++ +++++ GV PD T+PFV +A +G + G +VH +V
Sbjct: 81 RGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQVHAHV 140
Query: 115 VKTGLEFDTYVCNSIMDMYGVL-------------------------------GKICNVK 143
VK G E D +V N+++ M+ G I +
Sbjct: 141 VKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAAR 200
Query: 144 KLFDEMPDKDVVSWNV-------------------------------SISGHVKCMRFED 172
+LFDE P KD+VSWNV ISG+V+C +
Sbjct: 201 ELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQ 260
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN---QELEFTPIMGNA 229
A+++F +M Q PD T++S LSAC +++ G+ +HR+++ + + ++GNA
Sbjct: 261 AMELFEQM-QAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIGPSTVLGNA 319
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLW 289
L+DMY KCG ++ A E+F M +KNV W S++ G G + +A D+F +
Sbjct: 320 LIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQK--------- 370
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN- 348
M+ G V KPD+ VA+L C+ G +++G H Y N
Sbjct: 371 --MLQGNV--------------------KPDEITFVAVLVACSHGGMVDKG---HEYFNL 405
Query: 349 -ENRITVDAVVA--TALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKIN 404
+ R ++ V +++M ++ GL+++A E ++ E + W +++ ++G++
Sbjct: 406 MQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELE 465
Query: 405 KA 406
A
Sbjct: 466 LA 467
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 344/669 (51%), Gaps = 79/669 (11%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ A+ ++GL N + L+ + + A K+F +++ + +N +I+ +A
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCE--KMEAAAKVFEALEERNDVLWNAMIRGYAHN 406
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G K + LF ++ G + D+FT+ + +++ G + H ++K L + +V
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVG 466
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++DMY G + + +++F+ M D+D VSWN I G+V+ +A D+F RM C +
Sbjct: 467 NALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRM-NSCGI 525
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARE 245
+ D + STL ACT + L GK++H + L+ G++L+DMY KCG + +AR+
Sbjct: 526 VSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARK 585
Query: 246 ------------------------------LFDEMPNKNV-------------------- 255
LF EM K V
Sbjct: 586 VFSSMPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESL 645
Query: 256 ----------ICW----------TSMVSGYVNCGQLEKARDLFDR-SPVRDIVLWTAMIN 294
I W S++ Y+N ++ +A LF S + IVLWT M++
Sbjct: 646 TLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMS 705
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
G+ Q ++EA+ ++EM+ PD+ V +L C+ L +L +G+ IH I +
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQM 413
D + + LI+MYAKCG ++ + ++F E+R + + SW S+I G A NG AL++F M
Sbjct: 766 DELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
PD+ITF+GVL+ACSH G V +GR+ F M Y I+ +++H C++DLLGR G
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA++ I +N + L+ +LL ACRI+G+ GE A L ++E ++SS + LL
Sbjct: 886 LQEADDFIEA---QNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLL 942
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYAS RWE+ +R+ M++ GV+KVPG S I++ H F GD SHS++ +I L
Sbjct: 943 SNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFL 1002
Query: 594 DRMAKTLLD 602
+ + + D
Sbjct: 1003 EDLYDLMKD 1011
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 222/459 (48%), Gaps = 43/459 (9%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G P+ L + V T+ S G L A +FG + SP ++A+N++I K+G ++
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIE 313
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
F +R+ V T V A+G + + G VH +K GL + YV +S++ MY
Sbjct: 314 YFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTV 193
K+ K+F+ + +++ V WN I G+ +++F M+ G N+ D+ T
Sbjct: 374 KCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNI--DDFTF 431
Query: 194 VSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
S LS C +LE+G + H I ++L +GNAL+DMY KCG L +AR++F+ M +
Sbjct: 432 TSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD 491
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
++ + W +++ GYV Q E + FD LF M
Sbjct: 492 RDNVSWNTIIGGYV---QDENESEAFD----------------------------LFMRM 520
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCG 370
+ D L + L C + L QGK +H + +D V+ T +LI+MY+KCG
Sbjct: 521 NSCGIVSDGACLASTLKACTNVHGLYQGKQVHCL--SVKCGLDRVLHTGSSLIDMYSKCG 578
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
+IE A ++F + E S ++I G + N + +A+ LF +M++ G P +ITF ++
Sbjct: 579 IIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVE 637
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
AC + G +F + + + + E+ G I LLG
Sbjct: 638 ACHKPESLTLGTQFHGQIIK-WGFSSEGEYLG--ISLLG 673
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 202/422 (47%), Gaps = 39/422 (9%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
++ G+ VH + G++ + + N+I+D+Y ++ +K F+ + +KDV +WN +S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSM 134
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEF 222
+ + + F + + + P++ T LS N+E G++IH I LE
Sbjct: 135 YSSIGQPGKVLRSFVSLFENL-IFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG------------- 269
G AL+DMY KC L +A+ +FD + + N +CWT + SGYV G
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 270 ----------------------QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
+L+ AR LF P D+V W MI+G+ + A+
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIE 313
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
F M+ +K + L ++L+ + L+ G +H + + + V ++L+ MY+
Sbjct: 314 YFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KC +E A ++F L E++ W ++I G A NG+ +K +ELF M S G DD TF
Sbjct: 374 KCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
+LS C+ ++ G +F + + + ++ L L+D+ + G L++A ++ + +
Sbjct: 434 LLSTCAVSHDLEMGSQFHSIIIK-KKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR 492
Query: 488 NN 489
+N
Sbjct: 493 DN 494
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 156/352 (44%), Gaps = 39/352 (11%)
Query: 206 LELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
L +GK +H + + ++ +GNA++D+Y KC +S A + F+ + K+V W SM+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSM 134
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
Y + GQ K F V+LF + + P+KF
Sbjct: 135 YSSIGQPGKVLRSF---------------------------VSLFENL----IFPNKFTF 163
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+L+ A+ +E G+ IH + + + ++ AL++MYAKC + A +F + +
Sbjct: 164 SIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVD 223
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
+ WT + G G +A+ +F +M G +PD + F+ V++ G + + R
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLL 283
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
F M P + + +I G+ G A E + + + G++LSA
Sbjct: 284 FGEMP-----SPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIG 338
Query: 505 IYGNVDMGEKLAALLEKIESKDSSF-HTLLANIYASANRWEDVTNVRQKMKE 555
I N+D+G + A K+ + + + L ++Y+ + E V + ++E
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 21/203 (10%)
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
E LF+ ++ P + L AL GK +H I + + A++
Sbjct: 54 EQCKLFKSRKVFDEMPHRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIV 102
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
++YAKC + A + F L EKD +W S++ + G+ K L F + P+
Sbjct: 103 DLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKF 161
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY----GCLIDLLGRAGLLDEAEE 479
TF VLS + V+ GR+ +M I+ LE G L+D+ + L +A+
Sbjct: 162 TFSIVLSTSARETNVEFGRQIHCSM-----IKMGLERNSYCGGALVDMYAKCDRLGDAQR 216
Query: 480 LIRKIPNENNEIIVPLYGALLSA 502
+ I + N L+ + A
Sbjct: 217 VFDGIVDPNTVCWTCLFSGYVKA 239
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 313/559 (55%), Gaps = 41/559 (7%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ ++N +I A+ G ++LL FS +R+ + P ++P KA L ++ G++ H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
G + D +V ++++ MY GK+ + +K+FDE+P +++VSW I G+ D
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 173 AVDVFRRMRQGCN-----LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIM 226
AV +F+ + N + D +VS +SAC+ + L + IH + I + + +
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 227 GNALLDMYCKC--GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
GN LLD Y K G ++ AR++FD++ +K+ + + S++S Y G +A ++F R
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR---- 276
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ N V FN L +L + GAL GK IH
Sbjct: 277 ------LVKNKVVTFN--------------------AITLSTVLLAVSHSGALRIGKCIH 310
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ + D +V T++I+MY KCG +E A + F ++ K+ SWT++I G M+G
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
KALELF MI G +P+ ITF+ VL+ACSH GL EG R+FN M + ++P LEHYGC+
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCM 430
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAG L +A +LI+++ + + II + +LL+ACRI+ NV++ E A L +++S
Sbjct: 431 VDLLGRAGFLQKAYDLIQRMKMKPDSII---WSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+ ++ LL++IYA A RW+DV VR MK G+ K PG S +E+NG +H FL+GD H
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 585 EMKEIYSMLDRMAKTLLDS 603
+ ++IY L + + LL++
Sbjct: 548 QREKIYEFLAELNRKLLEA 566
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 11/267 (4%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ I + + + G + N L+ G + A KIF I ++YN ++ +A
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 65 KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G ++ +F +L + + V+ + T V AV G ++ G+ +H V++ GLE D
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V SI+DMY G++ +K FD M +K+V SW I+G+ A+++F M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ---ELEFTPIMGN--ALLDMYCKCG 238
+ P+ T VS L+AC+ + L E R+ N P + + ++D+ + G
Sbjct: 383 -GVRPNYITFVSVLAACS---HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 239 CLSEARELFDEMPNK-NVICWTSMVSG 264
L +A +L M K + I W+S+++
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ D SW S+I LA +G +AL FS M P +F + ACS + G++
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ V+ Q + LI + G L++A ++ +IP N
Sbjct: 98 -THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/383 (43%), Positives = 250/383 (65%), Gaps = 3/383 (0%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N +L Y ++EAR++FD MP ++++ W +M+ GY G++ AR++FD + RD
Sbjct: 27 NVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAF 86
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W++MI+ Y + R EA+ L+REM + PD LV++++ C+ LGAL G +H ++
Sbjct: 87 SWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFV 146
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
NRI +D + TALI+MYAKCG IE A +F + EKD +W+S+I GLA +G +++L
Sbjct: 147 ESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESL 206
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LFS+MIS G KP+ +TF+GVL AC+H GLV EG+++F +M EV+ I+P +EHYGC++DL
Sbjct: 207 SLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDL 266
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGR+G ++EA +LIR + E + II + ALL ACRI+ NV++ E+ A L ++
Sbjct: 267 LGRSGHVEEARQLIRSMTFEPDTII---WRALLGACRIHKNVEIAEEAMAKLRVLDPLGD 323
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ LL+NIYA AN WE V +R+ ++ ++++PG SSIE + IHEF+ GD H K
Sbjct: 324 GHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSK 383
Query: 588 EIYSMLDRMAKTLLDSKQNAMEG 610
EIY +L+ M L + M G
Sbjct: 384 EIYRVLEEMMDRLKQAGYKPMTG 406
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 152/330 (46%), Gaps = 74/330 (22%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG------------------ 163
D ++CN ++ Y ++ +K+FD MP +D+VSWN I G
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81
Query: 164 -------------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+ K R ++A++++R M +++PD T+VS +SAC+ L L +G
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREM-HAASIIPDCITLVSVVSACSDLGALAVGA 140
Query: 211 EIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
E+HR++ + +E +G AL+DMY KCG + A+ +FD MP K+V W+SM+ G N G
Sbjct: 141 EVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHG 200
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
G+ E+++LF +M +KP+ V +L
Sbjct: 201 L------------------------GH-------ESLSLFSKMISEGMKPNGVTFVGVLI 229
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATA-----LIEMYAKCGLIEKALEIFYELR- 383
C +G + +GK +NE V + T ++++ + G +E+A ++ +
Sbjct: 230 ACTHVGLVSEGKKYFRSMNE----VHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTF 285
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQM 413
E D W +++ ++ + A E +++
Sbjct: 286 EPDTIIWRALLGACRIHKNVEIAEEAMAKL 315
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +IF + +++ +I A+AK +++L L+ ++ + PD T V
Sbjct: 68 GEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVV 127
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G +VH +V +E D + +++DMY G I + +++FD MP+KDV
Sbjct: 128 SACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQ 187
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
+W+ I G +++ +F +M +G + P+ T V L ACT + + GK+ R
Sbjct: 188 TWSSMIIGLANHGLGHESLSLFSKMISEG--MKPNGVTFVGVLIACTHVGLVSEGKKYFR 245
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+N+ P + + ++D+ + G + EAR+L M + I W +++ +
Sbjct: 246 SMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNV 305
Query: 272 EKARDLFDRSPVRDIV---LWTAMINGYVQFNRFDEAVALFRE 311
E A + + V D + + + N Y Q N + E VA R+
Sbjct: 306 EIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSW-EGVAEMRK 347
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 307/594 (51%), Gaps = 82/594 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI AQI + GL +P KL++ C L YA ++F +P +N LI++ +
Sbjct: 19 KQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPDTFMHNTLIRSLS 78
Query: 65 KKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ SL F +LR + +SPD+FT+ F KAV ++ G ++H + G +
Sbjct: 79 LSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHI 138
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V +++ MY G + +++FDEM + +VV+WN ++ +C E A DVF
Sbjct: 139 FVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVF------ 192
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
C ++NL N +L Y K G L A
Sbjct: 193 ---------------GCMPVRNL------------------TSWNGMLAGYAKAGELGLA 219
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R +F EMP ++ + W++M+ G+ + G FD
Sbjct: 220 RRVFYEMPLRDEVSWSTMIVGFAHNGC-------------------------------FD 248
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA FRE+ ++ ++ L +L+ CAQ GA E GK +HG++ + V ALI
Sbjct: 249 EAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALI 308
Query: 364 EMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
+ Y+KCG + A +F + + SWTSII GLAM+G +A++LF +M G +PD
Sbjct: 309 DTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDG 368
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITFI +L ACSH GLV+EG F+ M +Y I+P +EHYGC++DL GRA L +A E I
Sbjct: 369 ITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFIC 428
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P N II + LL AC I+GN++M E + A L +++ +S H LL+N+YA A +
Sbjct: 429 EMPVSPNAII---WRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGK 485
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP-------SHSEMKEI 589
W+DV+++R+ M E ++K PG S IEI+ +I+ F+ G+ +H +++EI
Sbjct: 486 WKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREI 539
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 275/442 (62%), Gaps = 29/442 (6%)
Query: 132 MYGVLGKICNVKKLFDEMPD-KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
MYG L +++++F DVVSWN I G+VKC E A VF M +
Sbjct: 1 MYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPR------RN 54
Query: 191 GTVVSTL-SACTALKNLELGKEIHRYINQELEFTPIMG------NALLDMYCKCGCLSEA 243
G ST+ A L++ +E+ + P +G N+++ + + G L A
Sbjct: 55 GVSWSTMVGGYAAAGELDVAREM-------FDRMPAIGRNVVTWNSMVTGFARHGLLPLA 107
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R++FDEMP +N++ W +M+ GY ++ AR+LFD P +D+V WT MI+GY Q R+
Sbjct: 108 RKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQ 167
Query: 304 EAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV--VAT 360
+ + LFR MQ ++P++ +V++L+ CA L ALE+G+W+H +I+++++ ++ +
Sbjct: 168 DTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGA 227
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MYAKCG + A++IF L K+ ++W ++I LAMNG +++ F QM G KP
Sbjct: 228 ALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKP 287
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
+DITF+GVL+ACSHGGLVDEGRR F +M +QP+++HYGC++D+LGRAGLL+EAEEL
Sbjct: 288 NDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEEL 347
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK--IESKDSSFHTLLANIYA 538
IR +P + V ++GALL ACR++ D+ E++ + + + ++ S H L+++IYA
Sbjct: 348 IRSMPMAPD---VMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYA 404
Query: 539 SANRWEDVTNVRQKMKEMGVRK 560
+A +W DV RQ ++ G+RK
Sbjct: 405 AAGKWFDVLEARQVVQRSGIRK 426
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 185/449 (41%), Gaps = 91/449 (20%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A+++F + ++++ ++ +A G + +F ++ P +
Sbjct: 38 GEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM------------PAIG 85
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC------NSIMDMYGVLGKICNVKKLFDEM 149
+ V + G HG + FD N+++ Y V + ++LFD M
Sbjct: 86 RNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVM 145
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
P+KDVVSW ISG+ + R++D +++FR M+ N+ P+E T+VS LSAC L LE G
Sbjct: 146 PEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEG 205
Query: 210 KEIHRYINQE---LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
+ +H +I++ L +G AL+DMY KCG A ++F+ + KNV W ++++
Sbjct: 206 RWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLA 265
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G ARD D F +M+ KP+ V
Sbjct: 266 MNGN---ARDSVD----------------------------AFEQMKRTGEKPNDITFVG 294
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
+LT C+ G +++G+ M + CG+ + +
Sbjct: 295 VLTACSHGGLVDEGR------------------RCFQSMASTCGV------------QPE 324
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+ ++ L G + +A EL M PD + F +L AC D R
Sbjct: 325 VKHYGCMVDMLGRAGLLEEAEELIRSMPMA---PDVMVFGALLGACRMHKRFDVAER--- 378
Query: 447 TMTEVYQIQPKLEHYGCLI---DLLGRAG 472
+E++ + + GC + D+ AG
Sbjct: 379 VQSEIHSLNLNAQQSGCHVLISDIYAAAG 407
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 187/519 (36%), Positives = 287/519 (55%), Gaps = 42/519 (8%)
Query: 85 SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM--DMYGVLGKICNV 142
SP ++++ +G +K+ +H ++ G +T ++ + G +
Sbjct: 10 SPSRQQRSQLWRSCTTIGTLKQ---IHASMIVKGFNSNTSALRELIYASSIAISGTMAYA 66
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
+LF + + D WN I G + +A+ ++ +M GC + PD+ T L ACT
Sbjct: 67 HQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGC-VRPDKFTFPFVLKACTR 125
Query: 203 LKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEAR----------------- 244
L +++G +H R E + N L+ + CG L+ AR
Sbjct: 126 LCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSAL 185
Query: 245 --------------ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+LFDEMP K+++ W M++GY G++E AR LFD P RD+V W
Sbjct: 186 TAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWN 245
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
AMI GYV +A+ +F EM+ + PD+ +++LL+ C LG L+ G+ IH I+E
Sbjct: 246 AMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEM 305
Query: 351 RIT-VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
+ ++ ALI+MYAKCG I +ALE+F +REKD ++W S++ GLA +G K++ L
Sbjct: 306 GFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHL 365
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
F++M +PD+ITF+GVL ACSH G V+EGR++F+ M + Y I+P + HYGC++DLLG
Sbjct: 366 FTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLG 425
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
RAGLL+EA + I + E N I+ + LL ACRI+GNV++G + L K+ +S
Sbjct: 426 RAGLLNEAFDFIDTMKIEPNAIV---WRTLLGACRIHGNVELGRRANMQLLKMRHDESGD 482
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+ LL+NIYAS W+ V VR+ M + GVRK GCS IE
Sbjct: 483 YVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 521
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 213/466 (45%), Gaps = 98/466 (21%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LKQI A + G N L +L+ + G + YA ++F I P +N +I+
Sbjct: 29 LKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGS 88
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
A+ S ++ L+S++ V PD FT+PFV KA L VK G VHG V + G E +T
Sbjct: 89 AQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNT 148
Query: 124 YVCNSIM-------DM------------------------YGVLGKICNVKKLFDEMPDK 152
+V N+++ D+ Y G++ ++LFDEMP K
Sbjct: 149 FVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK 208
Query: 153 DVVSWNVSISGHVK-------------------------------CMRFEDAVDVFRRMR 181
D+VSWNV I+G+ K C + A+++F MR
Sbjct: 209 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 268
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGC 239
L PDE T++S LSACT L +L+ G+ IH I++ + + ++GNAL+DMY KCG
Sbjct: 269 SVGEL-PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGS 327
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A E+F M K+V W S++ G G EK
Sbjct: 328 IVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEK-------------------------- 361
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVV 358
++ LF EM+ ++++PD+ V +L C+ G +E+G+ + +E I +
Sbjct: 362 -----SIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRH 416
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
++++ + GL+ +A + ++ E +A W +++ ++G +
Sbjct: 417 YGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNV 462
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 302/568 (53%), Gaps = 38/568 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GN+ Y+ K+F + L+++N LI A+A+ G+ + LLL +R +G T+ V
Sbjct: 208 GNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVL 267
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
GE+K G +HG +++ G D +V S++ +Y GKI ++F+ DKDVV
Sbjct: 268 SVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVV 327
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
W ISG V+ + A+ VFR+M + + P T+ S ++AC L + LG I Y
Sbjct: 328 LWTAMISGLVQNGSADKALAVFRQMLK-FGVKPSTATMASVITACAQLGSYNLGTSILGY 386
Query: 216 I-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I QEL N+L+ MY K CG L+++
Sbjct: 387 ILRQELPLDVATQNSLVTMYAK-------------------------------CGHLDQS 415
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+FD RD+V W AM+ GY Q EA+ LF EM+ PD +V+LL GCA
Sbjct: 416 SIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCAST 475
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
G L GKWIH ++ N + +V T+L++MY KCG ++ A F ++ D SW++II
Sbjct: 476 GQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAII 535
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
G +GK AL +S+ + G KP+ + F+ VLS+CSH GLV++G + +MT+ + I
Sbjct: 536 VGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGI 595
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELI-RKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
P LEH+ C++DLL RAG ++EA + +K P+ ++ + G +L ACR GN ++G+
Sbjct: 596 APDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDP----VLDVLGIILDACRANGNNELGD 651
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
+A + + D+ LA+ YAS N+WE+V M+ +G++K+PG S I+I+G I
Sbjct: 652 TIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTI 711
Query: 574 HEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
F SH + +EI L + K ++
Sbjct: 712 TTFFTDHNSHPQFQEIVCTLKILRKEMI 739
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/553 (25%), Positives = 256/553 (46%), Gaps = 84/553 (15%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + ++ + +I +++ G ++ LF ++R +G+ P + T + V
Sbjct: 115 ARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSE 174
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L V + +HG + G D + NS++++YG G I +KLFD M +D+VSWN
Sbjct: 175 LAHV---QCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSL 231
Query: 161 ISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHR----- 214
IS + + + + + + MR QG P T S LS + L+LG+ +H
Sbjct: 232 ISAYAQIGNICEVLLLLKTMRLQGFEAGPQ--TFGSVLSVAASRGELKLGRCLHGQILRA 289
Query: 215 --YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
Y++ +E +L+ +Y K G + A +F+ +K+V+ WT+M+SG V G
Sbjct: 290 GFYLDAHVE------TSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSA- 342
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
D+A+A+FR+M +KP + +++T CA
Sbjct: 343 ------------------------------DKALAVFRQMLKFGVKPSTATMASVITACA 372
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
QLG+ G I GYI + +D +L+ MYAKCG ++++ +F + +D SW +
Sbjct: 373 QLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNA 432
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
++ G A NG + +AL LF++M S PD IT + +L C+ G + G ++ ++
Sbjct: 433 MVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLG-KWIHSFVIRN 491
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVP-------------- 494
++P + L+D+ + G LD A+ ++P+ + + IIV
Sbjct: 492 GLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFY 551
Query: 495 -------------LYGALLSACRIYGNVDMGEKLAALLEKIE--SKDSSFHTLLANIYAS 539
++ ++LS+C G V+ G + + K + D H + ++ +
Sbjct: 552 SKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSR 611
Query: 540 ANRWEDVTNVRQK 552
A R E+ NV +K
Sbjct: 612 AGRVEEAYNVYKK 624
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 214/470 (45%), Gaps = 56/470 (11%)
Query: 11 IFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFR 70
+F +Q+P L + +V HP+ N + N I + +G+
Sbjct: 1 MFSYKPKQSPSGLKRCVVSLPHPATTN-----------------SVNATINHHSTQGAHH 43
Query: 71 KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
+ L ++ + + V D +T+P + KA +L G +H ++ +GL D Y+ +S++
Sbjct: 44 QVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLI 103
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
+ Y G +K+FD MP+++VV W I + + R +A +F MR+ + P
Sbjct: 104 NFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQ-GIQPSS 162
Query: 191 GTVVSTLSACTALKNLEL--GKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
TV+S L + L +++ G I ++ + N++L++Y KCG + +R+LFD
Sbjct: 163 VTVLSLLFGVSELAHVQCLHGCAILYGFMSDINLS----NSMLNVYGKCGNIEYSRKLFD 218
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
M +++++ W S++S Y G + E + L
Sbjct: 219 YMDHRDLVSWNSLISAYAQIGNI-------------------------------CEVLLL 247
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
+ M++ + ++L+ A G L+ G+ +HG I +DA V T+LI +Y K
Sbjct: 248 LKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLK 307
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
G I+ A +F +KD WT++I GL NG +KAL +F QM+ G KP T V
Sbjct: 308 GGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASV 367
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
++AC+ G + G + ++ + L+ + + G LD++
Sbjct: 368 ITACAQLGSYNLGTSILGYILR-QELPLDVATQNSLVTMYAKCGHLDQSS 416
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 27/252 (10%)
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
A IN + + +A + M + D + +LL C+ L G +H I +
Sbjct: 31 ATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVS 90
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+++DA +A++LI YAK G + A ++F + E++ WT+II + G++ +A LF
Sbjct: 91 GLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLF 150
Query: 411 SQMISGGAKPDDITFIGVLSA--------CSHGGLVDEGR----RFFNTMTEVYQIQPKL 458
+M G +P +T + +L C HG + G N+M VY +
Sbjct: 151 DEMRRQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNI 210
Query: 459 EH---------------YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
E+ + LI + G + E L++ + + E +G++LS
Sbjct: 211 EYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVA 270
Query: 504 RIYGNVDMGEKL 515
G + +G L
Sbjct: 271 ASRGELKLGRCL 282
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 206/631 (32%), Positives = 333/631 (52%), Gaps = 74/631 (11%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL---LAYNLLIKAFAKKGSFRK 71
G + N N L+ + G+L A IF I + +++N ++ A K +
Sbjct: 185 GFESNVFICNALVAM--YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWT 242
Query: 72 SLLLFSKL------RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+L LFSK+ + D + + A G L V + ++VHG ++ G D +V
Sbjct: 243 ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFV 302
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ--- 182
N+++D Y G + N K+F+ M KDVVSWN ++G+ + FE A ++F+ MR+
Sbjct: 303 GNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENI 362
Query: 183 -----------------GC-----NL---------MPDEGTVVSTLSACTALKNLELGKE 211
GC NL +P+ T++S LSAC +L G E
Sbjct: 363 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 422
Query: 212 IHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
IH Y + N LL + G E +++ + +++ Y C
Sbjct: 423 IHAYS---------LKNCLLTLDNDFGGEDE-----------DLMVYNALIDMYSKCRSF 462
Query: 272 EKARDLFDRSPV--RDIVLWTAMINGYVQFNRFDEAVALFREM--QIIRLKPDKFILVAL 327
+ AR +FD P+ R++V WT MI G+ Q+ ++A+ LF EM + + P+ + + +
Sbjct: 463 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 522
Query: 328 LTGCAQLGALEQGKWIHGYI-NENRITVDA-VVATALIEMYAKCGLIEKALEIFYELREK 385
L CA L A+ GK IH Y+ +R A VA LI+MY+KCG ++ A +F + +K
Sbjct: 523 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 582
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
A SWTS++ G M+G+ ++AL++F +M G PDDITF+ VL ACSH G+VD+G +F
Sbjct: 583 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYF 642
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
++M+ Y + P+ EHY C IDLL R+G LD+A ++ +P E ++ + ALLSACR+
Sbjct: 643 DSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV---WVALLSACRV 699
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ NV++ E L ++ +++ +TL++NIYA+A RW+DV +R MK+ G++K PGCS
Sbjct: 700 HSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 759
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
++ F VGD SH +IY++L+ +
Sbjct: 760 WVQGQKGTASFFVGDRSHPLSPQIYALLESL 790
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 245/482 (50%), Gaps = 30/482 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G YA + + + +NLLI+ K+G ++ + ++ G PD+FT P V
Sbjct: 103 GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVL 162
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK--- 152
KA G L + G HG + G E + ++CN+++ MY G + +FDE+ +
Sbjct: 163 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 222
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRM-----RQGCNLMPDEGTVVSTLSACTALKNLE 207
DV+SWN +S HVK A+D+F +M + N D ++V+ L AC +LK +
Sbjct: 223 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 282
Query: 208 LGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
KE+H + F + +GNAL+D Y KCG + A ++F+ M K+V+ W +MV+GY
Sbjct: 283 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 342
Query: 267 NCGQLEKARDLF-----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
G E A +LF + P+ D+V WTA+I GY Q EA+ LFR+M P+
Sbjct: 343 QSGNFEAAFELFKNMRKENIPL-DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 401
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITV----------DAVVATALIEMYAKCGL 371
++++L+ CA LGA QG IH Y +N + D +V ALI+MY+KC
Sbjct: 402 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 461
Query: 372 IEKALEIFYE--LREKDAASWTSIICGLAMNGKINKALELFSQMISG--GAKPDDITFIG 427
+ A IF + L E++ +WT +I G A G N AL+LF +MIS G P+ T
Sbjct: 462 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 521
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAEELIRKIPN 486
+L AC+H + G++ + ++ + CLID+ + G +D A + +
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 581
Query: 487 EN 488
++
Sbjct: 582 KS 583
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
T +V+ Y+ CG + A + +R V W +I +++ R D A+ + M +
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
PD F L +L C +L + G HG I N + + AL+ MY++CG +E+A I
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 379 FYELREK---DAASWTSIICGLAMNGKINKALELFSQMI------SGGAKPDDITFIGVL 429
F E+ ++ D SW SI+ + AL+LFS+M + D I+ + +L
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 272
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
AC V + + P + LID + GL++ A
Sbjct: 273 PACGSLKAVPQTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENA 319
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/197 (18%), Positives = 79/197 (40%), Gaps = 4/197 (2%)
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ T ++ Y CG + AL + + A W +I G+++ A+ + +M+ G
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+PD T VL AC G F + + + L+ + R G L+EA
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLIC-CNGFESNVFICNALVAMYSRCGSLEEA 209
Query: 478 EELIRKIPNENNEIIV---PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+ +I + ++ + A + + + +D+ K+ ++ + + + S +
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269
Query: 535 NIYASANRWEDVTNVRQ 551
NI + + V ++
Sbjct: 270 NILPACGSLKAVPQTKE 286
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 286/513 (55%), Gaps = 47/513 (9%)
Query: 102 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNV 159
E K+ +++H +++TGL FD + + ++ + + +++FD++P ++ +WN
Sbjct: 46 SETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNT 105
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
I + ++ +F RM PD+ T + A + L+ L GK H + +
Sbjct: 106 LIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV 165
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L +G+ +V S++ Y CG+L +F
Sbjct: 166 L-----LGS-------------------------DVFILNSLIHFYAKCGELGLGYRVFV 195
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P RD+V W +MI +VQ +EA+ LF+EM+ +KP+ +V +L+ CA+ E
Sbjct: 196 NXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEF 255
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC---- 395
G+W+H YI NRI ++ A+++MY KCG +E A +F ++ EKD SWT+++
Sbjct: 256 GRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAK 315
Query: 396 --------GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
GLAM+G A+ LFS+M KP+ +TF +L ACSH GLV+EGR FFN
Sbjct: 316 IGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ 375
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
M VY + P ++HY C++D+LGRAGLL+EA ELI K+P ++GALL AC I+
Sbjct: 376 MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAP---AASVWGALLGACTIHE 432
Query: 508 NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
NV + E+ + L ++E + + LL+NIYA A +W+ V+ +R+ M+++G++K PGCSSI
Sbjct: 433 NVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSI 492
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
E++GI+HEFLVGD SH K+IY+ LD + L
Sbjct: 493 EVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARL 525
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 231/419 (55%), Gaps = 30/419 (7%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
QLKQI AQ+ + GL +P + ++L+ +L YA+++F I P L +N LI+A
Sbjct: 50 QLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRA 109
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A + +SLL+F ++ + PD FT+PF+ KA L E+ G+ HG V+K L
Sbjct: 110 YASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D ++ NS++ Y G++ ++F P +DVVSWN I+ V+ E+A+++F+ M
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEM- 228
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCL 240
+ N+ P+ T+V LSAC + E G+ +H YI + + + + NA+LDMY KCG +
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSV 288
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+A+ LFD+MP K+++ WT+M+ GY G+ + A+ L ++G+ +
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGL--------------AMHGHGK-- 332
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA- 359
+A+ALF +MQ ++KP+ +L C+ +G +E+G+ + N+ + +
Sbjct: 333 ---DAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGR---TFFNQMELVYGVLPGV 386
Query: 360 ---TALIEMYAKCGLIEKALEIFYELREKDAAS-WTSIICGLAMNGKINKALELFSQMI 414
++++ + GL+E+A+E+ ++ AAS W +++ ++ + A + SQ+I
Sbjct: 387 KHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLI 445
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 307/560 (54%), Gaps = 38/560 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F + + ++N +I F++ GS + LF +R G PD T + +AV
Sbjct: 106 AYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVIS 165
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD--EMPDKDVVSWN 158
++ + VH ++TGL+ DT V N+ + Y G++ K +F + + VSWN
Sbjct: 166 AKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWN 225
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCN-LMPDEGTVVSTLSACTALKNLELGKEIHRYIN 217
I+ + ++ DAV ++ + C+ PD T++S LS+C + L G IH +
Sbjct: 226 SLIACYAHFGKYVDAVKSYKGLL--CDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGF 283
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
Q GC S+ + +++S Y CG + A L
Sbjct: 284 Q------------------LGCDSDISLI------------NTLISMYSRCGDISSATIL 313
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FD +R V WTAMI+GY + R D+A+ LF M+ KPD +++L++GC + GAL
Sbjct: 314 FDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGAL 373
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
G WI Y + + + D VV ALI+MYAKCG + A EIFY L + SWT++I
Sbjct: 374 GLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAAC 433
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
A+NG+ +AL+LFS + G +P++ITF+ VL AC HGG +++GR F MTE Y I P
Sbjct: 434 ALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPG 493
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
L+HY C+IDLLGR G L EA E+I+ +P + +E I +GALL AC+I+ N+++GE ++
Sbjct: 494 LDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGI---WGALLGACKIHNNMEIGEYVSR 550
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFL 577
L +++ + + +ANIYAS RW++V +R+ M+ +RK PG S +++NG+ H F
Sbjct: 551 YLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFF 610
Query: 578 VGDPSHSEMKEIYSMLDRMA 597
V D SH + IY L +A
Sbjct: 611 VEDRSHHDSLLIYEALGNLA 630
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 183/397 (46%), Gaps = 41/397 (10%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL--LAYNLLIK 61
LK + A + GL + N + + G L A+ +F IQ +++N LI
Sbjct: 172 LKAVHAIGIETGLDADTSVSNTWIA--AYSKCGELQLAKMVFHGIQKTARSSVSWNSLIA 229
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+A G + ++ + L G PD T + + + G +HG+ + G +
Sbjct: 230 CYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDS 289
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D + N+++ MY G I + LFD M + VSW ISG+ + R +DA+ +F M
Sbjct: 290 DISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAME 349
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCL 240
+ PD TV+S +S C L LG I Y + EL+ ++ NAL+DMY KCG L
Sbjct: 350 E-TGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSL 408
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
++ARE+F +PN+ V+ WT+M++ G+ +A DLF
Sbjct: 409 NDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLF---------------------- 446
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV-- 358
+L E I +P+ +A+L C G LE+G+ + E R ++ +
Sbjct: 447 ------SLLSESGI---EPNNITFLAVLQACCHGGYLEKGRECFMMMTE-RYGINPGLDH 496
Query: 359 ATALIEMYAKCGLIEKALEIFYELREK-DAASWTSII 394
+ +I++ + G + +ALE+ ++ K D W +++
Sbjct: 497 YSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALL 533
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 33/278 (11%)
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN SI G V A+ +F +++ L P+ T AC L +L + IH ++
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLN-GLQPNNFTFPFLSKACAKLSHLTNSQIIHTHV 78
Query: 217 NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
+ ++ D+Y + T+MV YV CG+++ A +
Sbjct: 79 VKSPFYS--------DIYVQ----------------------TAMVDMYVKCGKVDDAYN 108
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
LFD+ PVR+I W AMI G+ Q D LF M+++ +PD ++ L +
Sbjct: 109 LFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKS 168
Query: 337 LEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE--KDAASWTSII 394
L K +H E + D V+ I Y+KCG ++ A +F+ +++ + + SW S+I
Sbjct: 169 LRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLI 228
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
A GK A++ + ++ G KPD T I +LS+C
Sbjct: 229 ACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSC 266
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 152/327 (46%), Gaps = 13/327 (3%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
I FQ+G + +N L+ + G++ A +F + +++ +I +++
Sbjct: 278 IHGHGFQLGCDSDISLINTLISM--YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEV 335
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVC 126
G +L+LF+ + E G PD T + G G + G + Y L+ D VC
Sbjct: 336 GRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVC 395
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
N+++DMY G + + +++F +P++ VVSW I+ F +A+D+F + + +
Sbjct: 396 NALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSES-GI 454
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEAR 244
P+ T ++ L AC LE G+E + + P + + ++D+ + G L EA
Sbjct: 455 EPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEAL 514
Query: 245 ELFDEMPNK-NVICWTSMVSGYVNCGQLE----KARDLFDRSPVRDIVLWTAMINGYVQF 299
E+ +MP K + W +++ +E +R LF+ P R V + M N Y
Sbjct: 515 EVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQP-RVAVSFVEMANIYASV 573
Query: 300 NRFDEAVALFREMQI--IRLKPDKFIL 324
R+DE A+ + M+ +R P K ++
Sbjct: 574 GRWDEVAAMRKTMRSNQMRKSPGKSVV 600
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%)
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
S + + W + I G V +A+ALF ++++ L+P+ F L CA+L L
Sbjct: 12 SKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNS 71
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
+ IH ++ ++ D V TA+++MY KCG ++ A +F ++ ++ ASW ++I G +
Sbjct: 72 QIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQI 131
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSA 431
G +++ LF M G +PD T IG+ A
Sbjct: 132 GSLDRVFNLFMGMRLVGTRPDAATVIGLTRA 162
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W S I G G +KAL LF Q+ G +P++ TF + AC+ + + +T
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNS-QIIHTHV 78
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPLYGALLSACRI 505
+ ++D+ + G +D+A L K+P N N +I+ + + S R+
Sbjct: 79 VKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIG-FSQIGSLDRV 137
Query: 506 YGNVDMGEKL 515
+ N+ MG +L
Sbjct: 138 F-NLFMGMRL 146
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 274/472 (58%), Gaps = 14/472 (2%)
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
L + + +FD + +V + I+ + A+ ++R M + P+
Sbjct: 101 LSNLSYARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPH 160
Query: 196 TLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGC-LSEARELFDEMPNK 253
L +CT + + +H + + E P++ ALLD Y + + AR LFDEM +
Sbjct: 161 VLKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTER 220
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
NV+ WT+M+SGY GQ+ A LF+ P RD+ W A+I GY Q F EA++LFR M
Sbjct: 221 NVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMI 280
Query: 314 IIRL-------KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
+ +P++ V L+ C G L GKWIHGY+ N + +D+ V+ AL++MY
Sbjct: 281 AVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMY 340
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS--GGAKPDDIT 424
KCG +++A +F E+ SW S+I LA++G+ A+ +F +M++ G KPD++T
Sbjct: 341 GKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVT 400
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
FIG+L+AC+HGGLV++G +F MT+ Y I+P++EHYGCL+DLLGRAG +EA E++R +
Sbjct: 401 FIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGM 460
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
E +E+I +G+LL+ C+I+G+ D+ E L ++ + + +LANIY +W+
Sbjct: 461 RIEPDEVI---WGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWD 517
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+V VR+ +KE K PGCS IEI+ +H+F D +H +EIY+ L+ +
Sbjct: 518 EVRKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTLESL 569
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 224/497 (45%), Gaps = 83/497 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQ+QA + +G Q KL+ FCT + NL YA IF ++SP + Y +I
Sbjct: 68 LNHLKQLQAFLITLGHAQTHFYAFKLLRFCT-LALSNLSYARFIFDHVESPNVYLYTAMI 126
Query: 61 KAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
A+A +LLL+ + R R P++F YP V K+ + VH V+++G
Sbjct: 127 TAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMVHCQVLRSGF 186
Query: 120 EFDTYVCNSIMDMY--------------------------------GVLGKICNVKKLFD 147
E V +++D Y LG+I N LF+
Sbjct: 187 EQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLGQIGNAVLLFE 246
Query: 148 EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM------RQGCNLMPDEGTVVSTLSACT 201
EMP++DV SWN I+G+ + F +A+ +FRRM G P++ T V +LSAC
Sbjct: 247 EMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACG 306
Query: 202 ALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
L LGK IH Y+ + L + NAL+DMY KCGCL EAR +FD +++ W S
Sbjct: 307 HTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNS 366
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII--RLK 318
M +NC L + A+++F EM +K
Sbjct: 367 M----INCLALH---------------------------GQSQNAISVFEEMMTCGSGVK 395
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKAL 376
PD+ + LL C G +E+G W++ + ++ + L+++ + G E+A+
Sbjct: 396 PDEVTFIGLLNACTHGGLVEKG-WLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAM 454
Query: 377 EIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
E+ +R E D W S++ G ++G + A ++I P++ + G++ A +G
Sbjct: 455 EVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLID--MDPNNGGY-GIMLANIYG 511
Query: 436 --GLVDEGRRFFNTMTE 450
G DE R+ + E
Sbjct: 512 ELGKWDEVRKVRKVLKE 528
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 327/598 (54%), Gaps = 39/598 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ + GL + N L+ + G +A ++F ++ L+++N +I + A
Sbjct: 924 KQVHGIAVKSGLDSDVSVANSLVNM--YSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 981
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDT 123
+ +S+ LF L G+ PD+FT V +A L + + ++H + +KTG D+
Sbjct: 982 QSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADS 1041
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V +++D+Y GK+ + LF D D+ WN + G++ + A+++F + +
Sbjct: 1042 FVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKS 1101
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
D+ T+ + AC L L+ GK+IH + I + + + +LDMY KCG
Sbjct: 1102 GE-KSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG---- 1156
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
+M N ++ F+ D V WT+MI+G V
Sbjct: 1157 ------DMVNAGIV---------------------FNYISAPDDVAWTSMISGCVDNGNE 1189
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
D+A+ ++ M+ R+ PD++ L+ + + ALEQG+ +H + + D V T+L
Sbjct: 1190 DQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSL 1249
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++MYAKCG IE A +F ++ ++ A W +++ GLA +G +A+ LF M S G +PD
Sbjct: 1250 VDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDR 1309
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
++FIG+LSACSH GL E + ++M Y I+P++EHY CL+D LGRAGL+ EA+++I
Sbjct: 1310 VSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIE 1369
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + + I ALL ACRI G+V+ G+++AA L +E DS+ + LL+NIYA+ANR
Sbjct: 1370 TMPFKASASI---NRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANR 1426
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W+DVT+ R+ MK V+K PG S I++ ++H F+V D SH + IY ++ M KT+
Sbjct: 1427 WDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTI 1484
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 220/494 (44%), Gaps = 67/494 (13%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFA-----KKGSFRKSLLLFSKLRERGVSPDNFT 90
G+L A ++F + L+ +N ++ A+A G+ ++ L LF LR S T
Sbjct: 670 GSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMT 729
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
V K G + E VHGY +K GLE+D +V +++++Y G++ + + LFD M
Sbjct: 730 LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 789
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
++DVV WN+ + G+V+ ++A +F + L PDE +V L+ + + N + GK
Sbjct: 790 ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHR-SGLRPDEFSVQLILNGVSEV-NWDEGK 847
Query: 211 EIHRYINQELEFTPIMGNALLDMYCKCGCLSE---------ARELFDEMP---------- 251
+ + Q + + D++C LSE A E F M
Sbjct: 848 WLADQV-QAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVT 906
Query: 252 -----------------------------NKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ +V S+V+ Y G AR++F+
Sbjct: 907 LLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK 966
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL-GALEQGK 341
D++ W +MI+ Q + +E+V LF ++ LKPD F L ++L C+ L L +
Sbjct: 967 HLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISR 1026
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
IH + + D+ VAT LI++Y+K G +E+A +F + D A W +++ G +
Sbjct: 1027 QIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGN 1086
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
KALELFS + G K D IT AC L+D+G+ QI
Sbjct: 1087 DGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGK----------QIHAHAIKA 1136
Query: 462 GCLIDLLGRAGLLD 475
G DL +G+LD
Sbjct: 1137 GFDSDLHVNSGILD 1150
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 192/434 (44%), Gaps = 66/434 (15%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
G+ H +V +G D ++ N+++ MY G + + +++FD P++D+V+WN + +
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 167 CMRFEDA-----VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQEL 220
+ D + +FR +R T+ L C L + +H Y I L
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTT-RMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 758
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD- 279
E+ + AL+++Y KCG + +AR LFD M ++V+ W M+ GYV G ++A LF
Sbjct: 759 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 818
Query: 280 --RSPVR-DIVLWTAMINGYVQFNRFDE-------------------------------- 304
RS +R D ++NG + N +DE
Sbjct: 819 FHRSGLRPDEFSVQLILNGVSEVN-WDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLS 877
Query: 305 ----------AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
A+ F M + + D L+ +L A LE GK +HG ++ +
Sbjct: 878 ECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDS 937
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D VA +L+ MY+K G A E+F +++ D SW S+I A + +++ LF ++
Sbjct: 938 DVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLL 997
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG------CLIDLL 468
G KPD T VL ACS L+D N +++ K + LID+
Sbjct: 998 HEGLKPDHFTLASVLRACS--SLIDG----LNISRQIHVHALKTGNIADSFVATTLIDVY 1051
Query: 469 GRAGLLDEAEELIR 482
++G ++EAE L +
Sbjct: 1052 SKSGKMEEAEFLFQ 1065
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 157/334 (47%), Gaps = 25/334 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q KQI A + G + + ++ + C G+++ A +F I +P +A+
Sbjct: 1123 LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC-----GDMVNAGIVFNYISAPDDVAWT 1177
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+I G+ ++L ++ ++R+ V PD +T+ + KA + +++G ++H V+K
Sbjct: 1178 SMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKL 1237
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
D +V S++DMY G I + +LF +M +++ WN + G + E+AV++F
Sbjct: 1238 DCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLF 1297
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN---QELEFTPIMGN--ALLD 232
+ M+ + PD + + LSAC+ + L E + Y++ + P + + L+D
Sbjct: 1298 KSMKSH-GIEPDRVSFIGILSACS---HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVD 1353
Query: 233 MYCKCGCLSEARELFDEMPNK------NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
+ G + EA ++ + MP K + + G V G+ AR LF P D
Sbjct: 1354 ALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAAR-LFALEPF-DS 1411
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+ + N Y NR+D+ + M+ +K D
Sbjct: 1412 AAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKD 1445
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/466 (38%), Positives = 284/466 (60%), Gaps = 13/466 (2%)
Query: 141 NVKKLFDEMPDK-DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSA 199
N+ LF++ DK +V SWN I+ + +A+ F MR+ +L P+ T + +
Sbjct: 27 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRK-LSLKPNRSTFPCAIKS 85
Query: 200 CTALKNLELGKEIHRYINQEL--EFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
C+AL +L G++ H+ Q L F P + +AL+DMY KCG L +AR LFDE+ ++N+
Sbjct: 86 CSALLDLHSGRQAHQ---QALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNI 142
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QI 314
+ WTSM++GYV +A +FD RD++ W ++I Y Q E++ +F M +
Sbjct: 143 VSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 202
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ + L A+L CA G+ GK IH + + + + V T++I+MY KCG +E
Sbjct: 203 GEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEM 262
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
A + F +REK+ SW++++ G M+G +ALE+F +M G KP+ ITF+ VL+ACSH
Sbjct: 263 ARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSH 322
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP 494
GL++EG +F M+ + ++P +EHYGC++DLLGRAG L EA +LI+ + + ++
Sbjct: 323 AGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVV-- 380
Query: 495 LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMK 554
+GALL ACR++ NVD+GE A L +++ K+ ++ LL+NIYA A RWEDV +R MK
Sbjct: 381 -WGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMK 439
Query: 555 EMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
G+ K PG S ++I G +H FLVGD H + ++IY L++++ L
Sbjct: 440 NSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKL 485
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 177/386 (45%), Gaps = 65/386 (16%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ ++N +I A+ G ++L FS +R+ + P+ T+P K+ L ++ G + H
Sbjct: 41 VFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQ 100
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV------K 166
+ G E D +V ++++DMY G++ + + LFDE+ +++VSW I+G+V +
Sbjct: 101 QALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHR 160
Query: 167 CMRFED-------------------------AVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
+R D ++++F RM + + + T+ + L AC
Sbjct: 161 ALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACA 220
Query: 202 ALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
+ LGK IH + I LE +G +++DMYCKCG + AR+ FD M KNV W++
Sbjct: 221 HSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSA 280
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
MV+GY G + EA+ +F EM + +KP+
Sbjct: 281 MVAGYGMHGHAK-------------------------------EALEVFYEMNMAGVKPN 309
Query: 321 KFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
V++L C+ G LE+G W +E + ++++ + G +++A ++
Sbjct: 310 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLI 369
Query: 380 YELR-EKDAASWTSIICGLAMNGKIN 404
++ D W +++ M+ ++
Sbjct: 370 KGMKLRPDFVVWGALLGACRMHKNVD 395
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 312/556 (56%), Gaps = 41/556 (7%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ ++N +I A+ G ++L FS +R+ + P+ T+P K+ L ++ G + H
Sbjct: 117 VFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQ 176
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+ G E D +V ++++DMY G++ + + LFDE+ +++VSW I+G+V+
Sbjct: 177 QALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHR 236
Query: 173 AVDVFRRMRQGCNLMPDEGTV-------VSTLSACTALKNLELGKEIHRY-INQELEFTP 224
A+ +F+ + +G V VS LSAC+ + + + +H + I + E
Sbjct: 237 ALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDL 296
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+ N L+D Y KCG L +R +FD M ++VI W S+++ Y G ++ ++F R V+
Sbjct: 297 GVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM-VK 355
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
D G + +N L A+L CA G+ GK IH
Sbjct: 356 D---------GEINYN--------------------AVTLSAVLLACAHSGSQRLGKCIH 386
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ + + + V T++I+MY KCG +E A + F +REK+ SW++++ G M+G
Sbjct: 387 DQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAK 446
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+ALE+F +M G KP+ ITF+ VL+ACSH GL++EG +F M+ + ++P +EHYGC+
Sbjct: 447 EALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCM 506
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAG L EA +LI+ + + ++ +GALL ACR++ NVD+GE A L +++
Sbjct: 507 VDLLGRAGYLKEAFDLIKGMKLRPDFVV---WGALLGACRMHKNVDLGEISARKLFELDP 563
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
K+ ++ LL+NIYA A RWEDV +R MK G+ K PG S ++I G +H FLVGD H
Sbjct: 564 KNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHP 623
Query: 585 EMKEIYSMLDRMAKTL 600
+ ++IY L++++ L
Sbjct: 624 QHEKIYEYLEKLSMKL 639
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 133/321 (41%), Gaps = 52/321 (16%)
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
++ W ++I + EA+ F M+ + LKP++ + C+ L L G+ H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
D V++AL++MY+KCG + A +F E+ ++ SWTS+I G N +
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235
Query: 405 KALELFSQMI--------SGGAKPDDITFIGVLSACS-----------HGGLVDEG---- 441
+AL LF + + G D I + VLSACS HG L+ G
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295
Query: 442 --------------------RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
RR F+ M E I + +I + + G+ E+ E+
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVIS-----WNSIIAVYAQNGMSTESMEIF 350
Query: 482 RKI--PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF-HTLLANIYA 538
++ E N V L LL AC G+ +G+ + + K+ + + F T + ++Y
Sbjct: 351 HRMVKDGEINYNAVTLSAVLL-ACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYC 409
Query: 539 SANRWEDVTNVRQKMKEMGVR 559
+ E +M+E V+
Sbjct: 410 KCGKVEMARKAFDRMREKNVK 430
>gi|449446173|ref|XP_004140846.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 488
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 285/520 (54%), Gaps = 54/520 (10%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+I+ +A G +S+ L+ L +RG+ P +FTYPFV K+ LG G+KVH ++KTG
Sbjct: 1 MIRGYAFNGPAHQSVSLYGDLLQRGLKPHSFTYPFVLKSCADLGWFWDGKKVHCRILKTG 60
Query: 119 LEFDTYVCNSIMDMY-----------GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
++ V +++ +Y G + +K+FDEM + V WN I
Sbjct: 61 FSLNSSVSDALFHLYVNFSKFTGPKDAADGMASDARKVFDEMCVRSVEVWNRMI------ 114
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG 227
+R+ DV ++ N M D TV
Sbjct: 115 LRYTSTGDV-SGAQKLFNTMEDRDTVS--------------------------------W 141
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N ++ Y K G + +ARELF++MP KNV+ WTSM+S Y G L AR F++ P R++V
Sbjct: 142 NTMISGYIKVGEVMKARELFEKMPEKNVVSWTSMISAYAKAGDLATARMFFNKMPQRNVV 201
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W +MI+ YVQ F EA+ LF +M + PD + V++ + C+ LG L G IH Y
Sbjct: 202 SWNSMISSYVQHGDFQEALDLFNQMLSEGITPDGYTFVSVFSACSHLGNLMLGTKIH-YA 260
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
++ + + ATALIEMYAKCG I +A +F ++ +KD W ++ LA++G+ AL
Sbjct: 261 IDDFSQLGVIAATALIEMYAKCGDINRAFNLFIKIGKKDVFFWNVMLKSLALHGQAQDAL 320
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+LFS M G KP+D TF+G L ACSHGG+V+EG+ F+ M + Y+I+P++EH+GC++DL
Sbjct: 321 KLFSLMQKQGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEYKIRPRIEHFGCIVDL 380
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
L R G L+EA +++ K+P E + V ++GALL C++ G+ ++ K+ SK+
Sbjct: 381 LSRNGRLEEALDVVDKMPFEAD---VAIWGALLGGCKLRGDFKRAGEIVERARKLRSKEG 437
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
H +N+YAS +W + N R+KM+ + K G SS+
Sbjct: 438 GIHVSFSNMYASVEQWAEAVNAREKMENENILKKTGQSSV 477
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 177/391 (45%), Gaps = 75/391 (19%)
Query: 21 ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR 80
E N++++ + S G++ A+K+F +++ +++N +I + K G K+ LF K+
Sbjct: 108 EVWNRMIL--RYTSTGDVSGAQKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEKMP 165
Query: 81 ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKIC 140
E+ V V W S++ Y G +
Sbjct: 166 EKNV-------------VSW--------------------------TSMISAYAKAGDLA 186
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
+ F++MP ++VVSWN IS +V+ F++A+D+F +M + PD T VS SAC
Sbjct: 187 TARMFFNKMPQRNVVSWNSMISSYVQHGDFQEALDLFNQMLSE-GITPDGYTFVSVFSAC 245
Query: 201 TALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
+ L NL LG +IH I+ + I AL++MY KCG ++ A LF ++ K+V W
Sbjct: 246 SHLGNLMLGTKIHYAIDDFSQLGVIAATALIEMYAKCGDINRAFNLFIKIGKKDVFFWNV 305
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
M+ GQ + +A+ LF MQ LKP+
Sbjct: 306 MLKSLALHGQAQ-------------------------------DALKLFSLMQKQGLKPN 334
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIF 379
F + L C+ G +E+G+ I + E +I ++++ ++ G +E+AL++
Sbjct: 335 DFTFLGALFACSHGGMVEEGQTIFDMMEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVV 394
Query: 380 YELR-EKDAASWTSIICGLAMNGKINKALEL 409
++ E D A W +++ G + G +A E+
Sbjct: 395 DKMPFEADVAIWGALLGGCKLRGDFKRAGEI 425
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 143/284 (50%), Gaps = 8/284 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A F + ++++N +I ++ + G F+++L LF+++ G++PD +T+ VF
Sbjct: 183 GDLATARMFFNKMPQRNVVSWNSMISSYVQHGDFQEALDLFNQMLSEGITPDGYTFVSVF 242
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G K+H Y + + ++++MY G I LF ++ KDV
Sbjct: 243 SACSHLGNLMLGTKIH-YAIDDFSQLGVIAATALIEMYAKCGDINRAFNLFIKIGKKDVF 301
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
WNV + + +DA+ +F M Q L P++ T + L AC+ +E G+ I
Sbjct: 302 FWNVMLKSLALHGQAQDALKLFSLM-QKQGLKPNDFTFLGALFACSHGGMVEEGQTIFDM 360
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLE 272
+ +E + P + + ++D+ + G L EA ++ D+MP +V W +++ G G +
Sbjct: 361 MEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVVDKMPFEADVAIWGALLGGCKLRGDFK 420
Query: 273 KARDLFDRS---PVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
+A ++ +R+ ++ + + N Y ++ EAV +M+
Sbjct: 421 RAGEIVERARKLRSKEGGIHVSFSNMYASVEQWAEAVNAREKME 464
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/439 (39%), Positives = 259/439 (58%), Gaps = 36/439 (8%)
Query: 188 PDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEAREL 246
P T S + AC+ + L G+ +H +I + + AL+D Y G + EAR +
Sbjct: 8 PTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRV 67
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR---------------------- 284
FDEM ++V WT+M+S + G + AR LFD PVR
Sbjct: 68 FDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAE 127
Query: 285 ---------DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
DI+ WT MI Y Q +F EA+A+F EMQ + PD+ + +++ CA LG
Sbjct: 128 LLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLG 187
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
AL+ GK IH Y E +D + +ALI+MYAKCG ++K+L +F++LR+K+ W SII
Sbjct: 188 ALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIE 247
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
GLA++G +AL +FS+M KP+ +TFI VL AC+H GLV+EGR+ F +M+ + I
Sbjct: 248 GLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIP 307
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P++EHYGC++DLLG+AGLL++A EL+R + E N +I +GALL C+++ N+ + +
Sbjct: 308 PEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVI---WGALLGGCKLHRNLKIAQVA 364
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV-PGCSSIEINGIIH 574
+ +E +S ++TLL N+YA NRW +V N+R MKE+GV K PG S IE++ IH
Sbjct: 365 VNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEMDRKIH 424
Query: 575 EFLVGDPSHSEMKEIYSML 593
+F D SH EIY++L
Sbjct: 425 QFAASDKSHLASDEIYTLL 443
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 174/390 (44%), Gaps = 101/390 (25%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
VSP +FT+ + KA + E+ GE VHG++ K G + +V +++D YG GKI +
Sbjct: 6 VSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEAR 65
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDA------------------VDVFRRMR--QG 183
++FDEM ++DV +W IS H + A +D + R+R +
Sbjct: 66 RVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVES 125
Query: 184 CNL----MPDEGTVV-STLSACTA------------------------------------ 202
L MP+ + +T+ AC +
Sbjct: 126 AELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAH 185
Query: 203 LKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L L+LGKEIH Y + + +G+AL+DMY KCG L ++ +F ++ KN+ CW S+
Sbjct: 186 LGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSI 245
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ G ++GY + EA+A+F MQ ++KP+
Sbjct: 246 IEGLA--------------------------VHGYAE-----EALAMFSRMQREKIKPNG 274
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENR---ITVDAVVATALIEMYAKCGLIEKALEI 378
+++L C G +E+G+ +++ +R I + ++++ K GL+E ALE+
Sbjct: 275 VTFISVLGACTHAGLVEEGR--KRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALEL 332
Query: 379 FYELR-EKDAASWTSII--CGLAMNGKINK 405
+R E ++ W +++ C L N KI +
Sbjct: 333 VRSMRMEPNSVIWGALLGGCKLHRNLKIAQ 362
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 147/292 (50%), Gaps = 10/292 (3%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
N+ AE +F + + ++++ +I +++ FR++L +F++++ G+ PD T +
Sbjct: 122 NVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIIS 181
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A LG + G+++H Y ++ G + D Y+ ++++DMY G + +F ++ K++
Sbjct: 182 ACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFC 241
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN I G E+A+ +F RM Q + P+ T +S L ACT +E G++ +
Sbjct: 242 WNSIIEGLAVHGYAEEALAMFSRM-QREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSM 300
Query: 217 NQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEK 273
+++ P + + ++D+ K G L +A EL M N + W +++ G L+
Sbjct: 301 SRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKI 360
Query: 274 ARDLFDRSPV---RDIVLWTAMINGYVQFNRFDEAV---ALFREMQIIRLKP 319
A+ + S V + +T ++N Y + NR+ E A +E+ + + P
Sbjct: 361 AQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSP 412
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
++ P F +L+ C+ + L G+ +HG+I + V TAL++ Y G I +A
Sbjct: 5 QVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEA 64
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+F E+ E+D +WT++I A G ++ A +LF +M
Sbjct: 65 RRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEM 102
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 192/554 (34%), Positives = 301/554 (54%), Gaps = 44/554 (7%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ AYN LI F G + L + ++R+ GV PD +T+P + K + + EV + +K+HG
Sbjct: 25 VFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKYTFPCLIKGLCEVMEVFQVKKIHG 84
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
V K GL+ D YV +S++ Y + ++LFDE+PD+DVV WN ++G+ + RF++
Sbjct: 85 LVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNSMVNGYAQIGRFDE 144
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALL 231
A+ V R M Q LM + TV LS + + G+ +H + I + + NAL+
Sbjct: 145 ALGVCREMSQEGVLM-SKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMGFDSCVSVCNALI 203
Query: 232 DMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
DMY KC C+ +A E+F+ M K++ W S++S C + LFDR
Sbjct: 204 DMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLRLFDR----------- 252
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
M+ VQ D + +L C+ L AL G+ IHGY+ N
Sbjct: 253 MLGDGVQL--------------------DLVTITTILPACSHLAALVHGREIHGYMIVNG 292
Query: 352 ITVDA--------VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
D AL++MYAKCG + A +FY + +D ASW +I G M+G
Sbjct: 293 FVKDGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYG 352
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
N+AL +FS M G KP++ITF+GVL ACSH G + +G +F M + + P ++HY C
Sbjct: 353 NEALYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTC 412
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
+ID+LGRAG L+EA +L +P + N ++ + ALL+AC++YGNVD+ E A + ++
Sbjct: 413 VIDMLGRAGQLEEAYKLAVTMPIQTNPVV---WRALLAACQLYGNVDLAEVAAQKVFELN 469
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
+ L++N Y +A R+++V ++R M++ V+K PGCS IE+ ++ F+ GD +H
Sbjct: 470 PAHCGNYVLMSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGDRNH 529
Query: 584 SEMKEIYSMLDRMA 597
E + IY L +A
Sbjct: 530 PEARLIYPELHLLA 543
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 174/377 (46%), Gaps = 43/377 (11%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F I ++ +N ++ +A+ G F ++L + ++ + GV FT V
Sbjct: 114 ARELFDEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAG 173
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G+ G VHG+++K G + VCN+++DMYG + + ++F+ M +KD+ SWN
Sbjct: 174 RGDFDNGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSI 233
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI---- 216
+S + C + + +F RM G + D T+ + L AC+ L L G+EIH Y+
Sbjct: 234 LSANELCSDHDGTLRLFDRML-GDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNG 292
Query: 217 -----NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
E + NAL+DMY KCG + +A +F M N++ W M+ GY
Sbjct: 293 FVKDGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGY------ 346
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
++GY +EA+ +F +M LKP++ V +L C
Sbjct: 347 --------------------GMHGY-----GNEALYMFSDMCKSGLKPNEITFVGVLLAC 381
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELR-EKDAAS 389
+ G + QG G + V + T +I+M + G +E+A ++ + + +
Sbjct: 382 SHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVV 441
Query: 390 WTSIICGLAMNGKINKA 406
W +++ + G ++ A
Sbjct: 442 WRALLAACQLYGNVDLA 458
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 163/357 (45%), Gaps = 43/357 (12%)
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
++V ++N ISG V +D + + MRQ ++PD+ T + + + K+
Sbjct: 23 RNVFAYNALISGFVLNGLPQDGLGAYEEMRQA-GVLPDKYTFPCLIKGLCEVMEVFQVKK 81
Query: 212 IHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH + + L+ +G++L+ Y K + EARELFDE+P+++V+ W SMV+G
Sbjct: 82 IHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNSMVNG------ 135
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
Y Q RFDEA+ + REM + KF + +L+
Sbjct: 136 -------------------------YAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSV 170
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
A G + G+ +HG++ + V ALI+MY KC + ALEIF + EKD SW
Sbjct: 171 FAGRGDFDNGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSW 230
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
SI+ + + L LF +M+ G + D +T +L ACSH + GR M
Sbjct: 231 NSILSANELCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIV 290
Query: 451 VYQIQP-------KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN---EIIVPLYG 497
++ L+ L+D+ + G + +A + + N + I++ YG
Sbjct: 291 NGFVKDGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYG 347
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 7/240 (2%)
Query: 265 YVNCGQLEKARDLFDRSP--VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
Y C Q+ +A + +R+ R++ + A+I+G+V + + + EM+ + PDK+
Sbjct: 2 YAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKY 61
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
L+ G ++ + Q K IHG + + + +D V ++L+ Y K L+++A E+F E+
Sbjct: 62 TFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEI 121
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
++D W S++ G A G+ ++AL + +M G T GVLS + G D GR
Sbjct: 122 PDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGR 181
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
M ++ + LID+ G+ + +A E+ + NE + + ++LSA
Sbjct: 182 LVHGFMIKM-GFDSCVSVCNALIDMYGKCRCVVDALEIFETM----NEKDIFSWNSILSA 236
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 194/580 (33%), Positives = 325/580 (56%), Gaps = 44/580 (7%)
Query: 54 LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGY 113
+A+N +I + + G +++ +F ++RE GV P T A LG ++ G++ H
Sbjct: 166 VAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAI 225
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
V G+E T + +S+++ Y +G I + + +F M +KDVV+WN+ ISG+V+ + A
Sbjct: 226 AVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKA 285
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLD 232
+++ MR NL D T+ + +SA ++NL+LGKE H Y I LE ++ ++++D
Sbjct: 286 LNMCHLMRLE-NLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVD 344
Query: 233 MYCKCGCLSEARELFDEMPNK-----------------------------------NVIC 257
MY KC + AR +F+ K NVI
Sbjct: 345 MYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVIS 404
Query: 258 WTSMVSGYVNCGQLEKARDLF----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
W S++ G++N GQ+ +A+D+F ++V WT +I+G + EA+ F+ MQ
Sbjct: 405 WNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQ 464
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+KP+ ++ +L C L +L+ G+ +HGY+ + + + +AT+L++MYAKCG +
Sbjct: 465 EAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRD 524
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+A +F + +K+ + ++I G A++G+ +AL L+ + G KPD+ITF L ACS
Sbjct: 525 QAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACS 584
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H +V EG F M + I P +EHYGC++ LL R G LDEA LI +P + + V
Sbjct: 585 HAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPD---V 641
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+ G+LL+ACR + +++ E L+ L K++ +S + ++N YA+A RW++V VRQ M
Sbjct: 642 QILGSLLAACREHNKIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLM 701
Query: 554 KEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
KE G+RK+PGCS I++ ++ F+ GD SH E +EIY+ L
Sbjct: 702 KERGLRKIPGCSWIQVGEELNVFVAGDKSHPETEEIYTTL 741
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 245/527 (46%), Gaps = 70/527 (13%)
Query: 5 KQIQAQIFQIG--LQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+QI AQI + G N KL++F C +P N +F ++ + ++ +
Sbjct: 30 RQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASN-----SLFRRVRLKNVFSWAAV 84
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I +KG ++++LL F +++E G+ PDNF P V KA G L ++ G+ VHG V
Sbjct: 85 IGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVHGLV----- 139
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
C + M+ KK MP ++ V+WN I G+V+ E+A++VF
Sbjct: 140 -----SCGYVWKMW----GGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYE 190
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG 238
MR+ + P + T+ S LSA L L+ GK+ H + +E T +G++L++ Y K G
Sbjct: 191 MREE-GVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVG 249
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ +A +F M K+V+ W ++SGYV G+++KA ++
Sbjct: 250 LIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHL------------------ 291
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
M++ L+ D L L++ A + L+ GK H Y N + D VV
Sbjct: 292 -------------MRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVV 338
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+++++MYAKC I A +F KD W +++ A G +AL LF QM
Sbjct: 339 VSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESV 398
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P+ I++ ++ + G V+E + F M + +QP L + LI L R+G EA
Sbjct: 399 PPNVISWNSLILGFLNSGQVNEAKDMFLQMQSL-GVQPNLVTWTTLISGLARSGFGYEAI 457
Query: 479 ELIRKI------PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+++ PN +V + G LL AC ++ +G L L
Sbjct: 458 LTFQRMQEAGVKPN-----VVSIIGVLL-ACINLASLQIGRALHGYL 498
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 21/284 (7%)
Query: 36 GNLLYAEKIFGSIQS----PCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
G + A+ +F +QS P L+ + LI A+ G +++L F +++E GV P+ +
Sbjct: 416 GQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSI 475
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
V A L ++ G +HGY+++ L + S++DMY G K++FD +PD
Sbjct: 476 IGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPD 535
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K++ +N ISG + +A+ ++R +++ L PD T + L AC+ + G E
Sbjct: 536 KELPIYNAMISGFALHGQAVEALALYRCLKEE-GLKPDNITFTNALYACSHAMMVSEGLE 594
Query: 212 I------HRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG 264
+ + IN +E M + + +CG L EA L MP K +V S+++
Sbjct: 595 LFVDMVSNHNINPSIEHYGCM----VSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAA 650
Query: 265 YVNCGQLE----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
++E + L P + + AM N Y R+DE
Sbjct: 651 CREHNKIELEEYLSNQLLKLQP-DNSGNYVAMSNAYAAAGRWDE 693
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 145/353 (41%), Gaps = 67/353 (18%)
Query: 203 LKNLELGKEIHRYINQELEFTPIM--GNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
LKNL +G E++ + Q + + G + K G + E + T
Sbjct: 3 LKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIE----------TK 52
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+V Y C E + LF R ++++ W A+I + + EA+ F+EMQ L PD
Sbjct: 53 LVIFYAKCDNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPD 112
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRI-----------------TVDAVVATALI 363
F+L +L C L + GK +HG ++ + +AV ++I
Sbjct: 113 NFVLPNVLKACGGLEWIRIGKVVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMI 172
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
Y + GL E+A+E+FYE+RE+ G +P +
Sbjct: 173 VGYVQNGLNEEAIEVFYEMREE-------------------------------GVEPTQV 201
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
T LSA ++ G + +G++ + + + I+ LI+ + GL+++AE + +
Sbjct: 202 TLSSFLSASANLGALQDGKQ-GHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSR 260
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL--LEKIESKDSSFHTLLA 534
+ ++ V + L+S G VD + L LE + + TL++
Sbjct: 261 MLEKD----VVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMS 309
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR--ITVDAVVATALIEMYAK 368
E++ +R+ P+ + LL GC AL G+ IH I + ++ + T L+ YAK
Sbjct: 2 ELKNLRIGPE--VYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAK 59
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
C E + +F +R K+ SW ++I G +AL F +M G PD+ V
Sbjct: 60 CDNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNV 119
Query: 429 LSACSHGGL 437
L AC GGL
Sbjct: 120 LKAC--GGL 126
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 245/368 (66%), Gaps = 3/368 (0%)
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ ++L+ +YC CG +++AR +FDEM ++V+ W M++GYV G AR+LFD P R+
Sbjct: 115 VSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMPERN 174
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+V WT +I GY Q R ++AV +FR MQ+ ++ D L+++L C LGA++ G+W+H
Sbjct: 175 VVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEWVHR 234
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
++ + + + ++I+MY KCG IEKA+E+F + EK +WT++I G A++G +
Sbjct: 235 FVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQ 294
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A+E+F +M P+ +TF+ +LSACSH GL D GR +FN M Y+I+P++EHYGC++
Sbjct: 295 AVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMV 354
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DLLGRAG L EA++L++ +P + N I +GALL+A R +G+ +GE+ L ++E
Sbjct: 355 DLLGRAGCLKEAQDLVKNMPLKANAAI---WGALLAAARTHGDAGLGEQALLHLIELEPN 411
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSE 585
+S + LL+NI+A RW DV+ +R+ M+E G+R VPG SSIE++G++HEF D SH
Sbjct: 412 NSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHEFTSRDWSHPF 471
Query: 586 MKEIYSML 593
+ I +L
Sbjct: 472 IHTICEVL 479
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 152/315 (48%), Gaps = 68/315 (21%)
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC-------------- 167
D +V +S++ +Y G + + + +FDEM +DVV+WNV I+G+VK
Sbjct: 112 DAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMP 171
Query: 168 -----------------MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
R E AV+VFRRM Q + D ++S L+AC L ++LG+
Sbjct: 172 ERNVVSWTTVIGGYAQMKRPEKAVEVFRRM-QVEGIEADGVALLSVLAACGDLGAVDLGE 230
Query: 211 EIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+HR++ + + P+M N+++DMY KCGC+ +A E+F+ M K+V+ WT++++G+
Sbjct: 231 WVHRFVVRRGLCQEIPLM-NSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALH 289
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G +A ++F R M+ + P+ +A+L
Sbjct: 290 GLGLQAVEMFCR-------------------------------MERENMAPNAVTFLAIL 318
Query: 329 TGCAQLGALEQGKWIHG-YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-D 386
+ C+ +G + G+W +++ RI ++++ + G +++A ++ + K +
Sbjct: 319 SACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKAN 378
Query: 387 AASWTSIICGLAMNG 401
AA W +++ +G
Sbjct: 379 AAIWGALLAAARTHG 393
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 4/232 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ +A ++F ++ ++++ +I +A+ K++ +F +++ G+ D V
Sbjct: 158 GDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVL 217
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A G LG V GE VH +VV+ GL + + NSI+DMY G I ++F+ M +K VV
Sbjct: 218 AACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVV 277
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I+G AV++F RM + N+ P+ T ++ LSAC+ + +LG+
Sbjct: 278 TWTTLIAGFALHGLGLQAVEMFCRMERE-NMAPNAVTFLAILSACSHVGLTDLGRWYFNI 336
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSG 264
+ + P + + ++D+ + GCL EA++L MP K N W ++++
Sbjct: 337 MVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAA 388
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 61/222 (27%)
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELR---------------------------- 383
+ DA V+++L+++Y CG + A +F E+
Sbjct: 109 VASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFD 168
Query: 384 ---EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
E++ SWT++I G A + KA+E+F +M G + D + + VL+AC G VD
Sbjct: 169 AMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDL 228
Query: 441 G---RRF------------FNTMTEVYQ----IQPKLE-----------HYGCLIDLLGR 470
G RF N++ ++Y I+ +E + LI
Sbjct: 229 GEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFAL 288
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
GL +A E+ ++ EN + A+LSAC G D+G
Sbjct: 289 HGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLG 330
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/460 (37%), Positives = 272/460 (59%), Gaps = 17/460 (3%)
Query: 143 KKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV-DVFRRMRQGCNLMPDEGTVVSTLSACT 201
++LFD++PD ++ WN G+ + + + ++F R M + + + L +
Sbjct: 5 RQLFDQIPDPNIALWNSMFRGYAQSESYREIFCEMFERNVVAWTSMINGYILSADLVSAR 64
Query: 202 ALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L +L +++ ++ N ++ Y + G + EAR+LF EMPN++V+ W ++
Sbjct: 65 RLFDLAPERDV------------VLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTV 112
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKPD 320
+ GY G +E LF+ P R+I W A+I GY F E + F+ M + P+
Sbjct: 113 LKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPN 172
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
LV +L+ CA+LGAL+ GKW+H Y + + + V AL++MYAKCG+IE A+ +F
Sbjct: 173 DATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFR 232
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
+ KD SW ++I GLAM+ + AL LF QM + G KPD ITFIG+L AC+H GLV++
Sbjct: 233 GMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVED 292
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
G +F +M + Y I P++EHYGC++D+L RAG L++A +RK+P E + +I + LL
Sbjct: 293 GFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVI---WAGLL 349
Query: 501 SACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
ACRIY NV++ E L ++E K+ + + +L+NIY A RWEDV ++ M++ G +K
Sbjct: 350 GACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKK 409
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+PGCS IE+N + EF D H +++EIY +L + K L
Sbjct: 410 LPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVL 449
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 174/398 (43%), Gaps = 64/398 (16%)
Query: 38 LLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGV------------S 85
+ YA ++F I P + +N + + +A+ S+R+ +F ++ ER V S
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQSESYRE---IFCEMFERNVVAWTSMINGYILS 57
Query: 86 PDNFTYPFVFKAVGWLGEVKKGEKVHGYV-----VKTGLEF------DTYVCNSIMDMYG 134
D + +F V V GY+ V+ F D N+++ Y
Sbjct: 58 ADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYA 117
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
G + ++ LF+EMP++++ SWN I G+ F + + F+RM ++ P++ T+V
Sbjct: 118 TNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLV 177
Query: 195 STLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 253
+ LSAC L L+LGK +H Y L+ +GNAL+DMY KCG + A +F M K
Sbjct: 178 TVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTK 237
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
++I W + +I G +R +A+ LF +M+
Sbjct: 238 DLISWNT-------------------------------LIGGLAMHSRGADALNLFFQMK 266
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLI 372
KPD + +L C +G +E G + ++ I +++M A+ G +
Sbjct: 267 NAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRL 326
Query: 373 EKALEIFYELR-EKDAASWTSIICGLAMNGKINKALEL 409
E+A+ ++ E D W GL +I K +EL
Sbjct: 327 EQAMAFVRKMPVEADGVIWA----GLLGACRIYKNVEL 360
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 69/278 (24%)
Query: 240 LSEARELFDEMPN----------------------------KNVICWTSMVSGYVNCGQL 271
++ AR+LFD++P+ +NV+ WTSM++GY+ L
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQSESYREIFCEMFERNVVAWTSMINGYILSADL 60
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
AR LFD +P RD+VLW M++GY++ EA LF EM P++
Sbjct: 61 VSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEM------PNR---------- 104
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
D + +++ YA G +E +F E+ E++ SW
Sbjct: 105 -----------------------DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWN 141
Query: 392 SIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++I G A NG + L F +M+S P+D T + VLSAC+ G +D G ++ + E
Sbjct: 142 ALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLG-KWVHVYAE 200
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
++ + L+D+ + G+++ A + R + ++
Sbjct: 201 SSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKD 238
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 5/237 (2%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK-LRERGVSPDNFT 90
+ ++GN+ E +F + + ++N LI +A G F + L F + L E V P++ T
Sbjct: 116 YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDAT 175
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
V A LG + G+ VH Y +GL+ + YV N++MDMY G I N +F M
Sbjct: 176 LVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMD 235
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
KD++SWN I G R DA+++F +M+ PD T + L ACT + +E G
Sbjct: 236 TKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQ-KPDGITFIGILCACTHMGLVEDGF 294
Query: 211 EIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
+ + + P + + ++DM + G L +A +MP + + W ++
Sbjct: 295 AYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGA 351
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 287/488 (58%), Gaps = 11/488 (2%)
Query: 79 LRERGV-SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG 137
LR G+ +P P + +A+ + + HG + G E D +V +++ Y G
Sbjct: 59 LRRVGLPAPGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACG 118
Query: 138 KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTL 197
++ + +++FD MPD+D+V+W V + + + +E+A+ +F M++ ++PD+ + + L
Sbjct: 119 RVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRS-RVVPDQVIIATVL 177
Query: 198 SACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
S C +NL GK IH Y + + + AL++MY C + A +L++ + K ++
Sbjct: 178 STCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSEKEIV 237
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
T+MV GY G++E A +F+ P +D+V W+AMI GY + ++ EA+ LF +MQ
Sbjct: 238 LSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSG 297
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+KPD+ ++++++ CA +GALE+ + IH ++ + + + ALI+M++KCG + AL
Sbjct: 298 VKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKCGSLTLAL 357
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F + +K+ +WTSII AM+G AL LF M S G +P+ +TF+G+L AC H G
Sbjct: 358 DVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAG 417
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LV+EGR F M + Y+I+P EHYGC++DLLGRA LL +A +LI+ + N +I +
Sbjct: 418 LVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVI---W 474
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV-----TNVRQ 551
G+LL+ACR++G++++G A + +++ LL+NIYA W DV +
Sbjct: 475 GSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVKEGLSKKDYE 534
Query: 552 KMKEMGVR 559
K KE+ R
Sbjct: 535 KKKELAAR 542
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 181/403 (44%), Gaps = 68/403 (16%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F + L+A+ +++ + + ++ ++LLLF ++ V PD V
Sbjct: 118 GRVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVL 177
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG--------------------V 135
++ G+ +H Y++ + D V ++M+MY V
Sbjct: 178 STCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSEKEIV 237
Query: 136 L-----------GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
L GK+ +F+ MP KDVVSW+ I+G+ + + +A+++F M Q
Sbjct: 238 LSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDM-QRS 296
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSE 242
+ PDE T++S +SAC + LE + IH ++ + PI GNAL+DM+ KCG L+
Sbjct: 297 GVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPI-GNALIDMFSKCGSLTL 355
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A ++F+ MP KNV+ WTS+++ G RS
Sbjct: 356 ALDVFNAMPQKNVVTWTSIITASAMHGD--------GRS--------------------- 386
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG-YINENRITVDAVVATA 361
A+ LF M+ ++P+ + LL C G +E+G+ + + + RI
Sbjct: 387 --ALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGC 444
Query: 362 LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
++++ + L+ +A ++ + + W S++ M+G +
Sbjct: 445 MVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDL 487
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 119/254 (46%), Gaps = 5/254 (1%)
Query: 22 TLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRE 81
L+ MV+ + +G + A IF + + +++++ +I +A+ ++L LF ++
Sbjct: 237 VLSTTMVY-GYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQR 295
Query: 82 RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICN 141
GV PD T V A +G ++K +H +V + + N+++DM+ G +
Sbjct: 296 SGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKCGSLTL 355
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
+F+ MP K+VV+W I+ A+ +F M+ + P+ T + L AC
Sbjct: 356 ALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSE-GIQPNGVTFLGLLYACC 414
Query: 202 ALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICW 258
+E G+ + + + Q+ P+ + ++D+ + L +A +L M NV+ W
Sbjct: 415 HAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIW 474
Query: 259 TSMVSGYVNCGQLE 272
S+++ G LE
Sbjct: 475 GSLLAACRMHGDLE 488
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 311/598 (52%), Gaps = 40/598 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
+Q ++I ++ + +N L+ ++C L A K+F +++ L+++ +I +
Sbjct: 235 RQTHGYAYRIAVETDASVINALIDLYCKCS---RLSLARKLFDCMENRNLVSWTTMIAGY 291
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ +++ +F +L + G PD F + + G L + +G +VH + +K LE D
Sbjct: 292 MQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDE 351
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YV NS++DMY + + +F+ + + D +S+N I G+ + A+DVF +MR
Sbjct: 352 YVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRY- 410
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSE 242
C+L P T VS L ++ +EL K+IH I + G++L+D+Y K + +
Sbjct: 411 CSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVED 470
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A+ +F+ M N RD+V+W AMI G Q +
Sbjct: 471 AKAVFNLMHN-------------------------------RDMVIWNAMIFGLAQNEQG 499
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+EAV LF ++Q+ L P++F VAL+T + L ++ G+ H I + D V+ AL
Sbjct: 500 EEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNAL 559
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MYAKCG I++ +F KD W S+I A +G+ +AL +F M G +P+
Sbjct: 560 IDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNY 619
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+TF+GVLSAC+H GLVDEG R F+ M Y I+P EHY +++L GR+G L A+E I
Sbjct: 620 VTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIE 679
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
++P E + + +LLSAC ++GNV++G + + DS L++NIYAS
Sbjct: 680 RMPIEPAAAV---WRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGL 736
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
W D +RQ M GV K PG S IE+ +H F+ H E IYS+LD + L
Sbjct: 737 WSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSIL 794
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 230/459 (50%), Gaps = 42/459 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER--GVSPDNFTYPF 93
G + A ++F + L+++ I A+ G ++ LF+ + G +P+ F
Sbjct: 60 GRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLAS 119
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKD 153
+A V G++VHG V+ GL+ + YV +++++Y +G I +FD +P K+
Sbjct: 120 ALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKN 179
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
V+W I+G+ + + A+++F +M + PD + S +SAC+AL LE G++ H
Sbjct: 180 PVTWTAVITGYSQIGQGGVALELFGKMGLD-GVRPDRFVLASAVSACSALGFLEGGRQTH 238
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
Y + +E + NAL+D+YCKC LS AR+LFD M N+N++ WT+M++GY+
Sbjct: 239 GYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQ----- 293
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFD-EAVALFREMQIIRLKPDKFILVALLTGC 331
N D EA+A+F ++ +PD F ++L C
Sbjct: 294 ---------------------------NSCDAEAMAMFWQLSQEGWQPDVFACASILNSC 326
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
L A+ QG+ +H + + + D V +LI+MYAKC + +A +F L E DA S+
Sbjct: 327 GSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYN 386
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
++I G + G + A+++FS+M KP +TF+ +L S ++ ++ +
Sbjct: 387 AMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGL---I 443
Query: 452 YQIQPKLEHYG--CLIDLLGRAGLLDEAEELIRKIPNEN 488
+ L+ Y LID+ + L+++A+ + + N +
Sbjct: 444 VKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRD 482
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 187/385 (48%), Gaps = 42/385 (10%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
H V TG D ++ N ++ Y LG++ + ++LFD MP K++VSW +IS H +
Sbjct: 33 AHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGC 92
Query: 170 FEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMG 227
EDAV +F R P+E + S L AC + + G+++H + L+ +G
Sbjct: 93 EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVG 152
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
AL+++Y K GC+ A +FD +P KN + WT++++GY GQ
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQ----------------- 195
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
G V A+ LF +M + ++PD+F+L + ++ C+ LG LE G+ HGY
Sbjct: 196 -------GGV-------ALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYA 241
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ DA V ALI++Y KC + A ++F + ++ SWT++I G N +A+
Sbjct: 242 YRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAM 301
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----YGC 463
+F Q+ G +PD +L++C + +GR+ + I+ LE
Sbjct: 302 AMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQ-----VHAHAIKANLESDEYVKNS 356
Query: 464 LIDLLGRAGLLDEAEELIRKIPNEN 488
LID+ + L EA + + ++
Sbjct: 357 LIDMYAKCEHLTEARAVFEALAEDD 381
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 266/453 (58%), Gaps = 32/453 (7%)
Query: 150 PDKDVVSWNVSISGHVKCMRFE-DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
P D +N I + + A+ + MR+ + P++ T L AC + LEL
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHA-VSPNKFTFPFVLKACAGMMRLEL 245
Query: 209 GKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G +H + E P + N L+ MYC C C + SG V+
Sbjct: 246 GGAVHASMVKFGFEEDPHVRNTLVHMYC-CCCQDGS-------------------SGPVS 285
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
A+ +FD SPV+D V W+AMI GY + AV LFREMQ+ + PD+ +V++
Sbjct: 286 ------AKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSV 339
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+ CA LGALE GKW+ YI I + ALI+M+AKCG +++A+++F E++ +
Sbjct: 340 LSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTI 399
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SWTS+I GLAM+G+ +A+ +F +M+ G PDD+ FIGVLSACSH GLVD+G +FNT
Sbjct: 400 VSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNT 459
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
M ++ I PK+EHYGC++D+L RAG ++EA E +R +P E N++I + ++++AC G
Sbjct: 460 MENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVI---WRSIVTACHARG 516
Query: 508 NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+ +GE +A L + E S + LL+NIYA RWE T VR+ M G+RK+PG + I
Sbjct: 517 ELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMI 576
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
E+N I+EF+ GD SH + KEIY M++ M + +
Sbjct: 577 EMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREI 609
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 207/429 (48%), Gaps = 59/429 (13%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIF----GSIQSPCLLAY--NL 58
QI + I ++GL NP L K F SH N + YA + + P A+ N
Sbjct: 140 QIHSLILKLGLHHNPLVLTK---FAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNT 196
Query: 59 LIKAFAKKGSFR-KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+AFA+ + +L ++ +R VSP+ FT+PFV KA + ++ G VH +VK
Sbjct: 197 LIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKF 256
Query: 118 GLEFDTYVCNSIMDMY------GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE 171
G E D +V N+++ MY G G + + KK+FDE P KD V+W+ I G+ +
Sbjct: 257 GFEEDPHVRNTLVHMYCCCCQDGSSGPV-SAKKVFDESPVKDSVTWSAMIGGYARAGNSA 315
Query: 172 DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNAL 230
AV +FR M Q + PDE T+VS LSAC L LELGK + YI ++ + + NAL
Sbjct: 316 RAVTLFREM-QVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNAL 374
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+DM+ KCG + A ++F EM + ++ WTSM+ G G
Sbjct: 375 IDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHG--------------------- 413
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN-- 348
R EAV +F EM + PD + +L+ C+ G +++G H Y N
Sbjct: 414 ----------RGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKG---HYYFNTM 460
Query: 349 ENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINK 405
EN ++ + +++M ++ G + +ALE + E + W SI+ G++
Sbjct: 461 ENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKL 520
Query: 406 ALELFSQMI 414
+ ++I
Sbjct: 521 GESVAKELI 529
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 150/321 (46%), Gaps = 15/321 (4%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
+ A + + G +++P N L+ C + A+K+F + ++ +I +
Sbjct: 249 VHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGY 308
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
A+ G+ +++ LF +++ GV PD T V A LG ++ G+ + Y+ + +
Sbjct: 309 ARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSV 368
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR-MRQ 182
+CN+++DM+ G + K+F EM + +VSW I G R +AV VF M Q
Sbjct: 369 ELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQ 428
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCL 240
G + PD+ + LSAC+ ++ G + P + + ++DM + G +
Sbjct: 429 GVD--PDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRV 486
Query: 241 SEARELFDEMP-NKNVICWTSMVSGYVNCGQLE----KARDLFDRSPVRDIVLWTAMING 295
+EA E MP N + W S+V+ G+L+ A++L R P + + + N
Sbjct: 487 NEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHE-SNYVLLSNI 545
Query: 296 YVQFNRFDEAVALFREMQIIR 316
Y + R+++ + REM ++
Sbjct: 546 YAKLLRWEKKTKV-REMMDVK 565
>gi|357447289|ref|XP_003593920.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482968|gb|AES64171.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 801
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 199/561 (35%), Positives = 317/561 (56%), Gaps = 44/561 (7%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+T++ Q + + L P TL+KL+ S ++ YA IF IQ+P L YN ++
Sbjct: 26 ITEIHQFHCYMIKTSLTNVPFTLSKLLA----ASIFDMNYASTIFTCIQNPNLFMYNTML 81
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ S K+L +F+KLR G D F++ V KA G EV G VHG VVK+G
Sbjct: 82 RGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMKACGRSFEVGFGRGVHGIVVKSGNR 141
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVKCMRFEDAVDVFRR 179
F + N+I+ Y V G+I + +K+FDE P++ D+VSWN+ + G V + D+F
Sbjct: 142 FFVDLNNTILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSFVFDLF-- 199
Query: 180 MRQGCN-LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKC 237
+++GC+ + T +S LSA + + LGK +H Y I + AL+DMY K
Sbjct: 200 LKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKT 259
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
GC+ Y+ AR +FD +D+VLW +I Y
Sbjct: 260 GCI------------------------YL-------ARKVFDGVVEKDVVLWNCLIKNYA 288
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ +EAVAL + M+ +KP+ LV LL+ + G+++ +++ I E ++ +D +
Sbjct: 289 RSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIEEEKLELDVI 348
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ TAL+++YAKCG +++A+EIF + KD SWT++I G ++G+ A+ LF++M + G
Sbjct: 349 LGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHGIHGQAINAISLFNRMENEG 408
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P++ITF+ +L+ACSHGGLV EG FF M + + P +EHYGCLIDLLGRAG+L EA
Sbjct: 409 FRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLIDLLGRAGMLHEA 468
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
ELI+ +P + + + LLSACR++G+V +GE + +L + + L++ Y
Sbjct: 469 FELIKSLPIKGD---ATSWRTLLSACRVHGDVKLGECVKDVLSNFYTPHPTDSLLISGTY 525
Query: 538 ASANRWEDVTNVRQKMKEMGV 558
A+A R D+T + Q+MK+ V
Sbjct: 526 AAAGRISDLTRM-QEMKQTNV 545
>gi|359486281|ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g45350, chloroplastic-like [Vitis vinifera]
Length = 704
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 325/595 (54%), Gaps = 37/595 (6%)
Query: 18 QNPETLNKLMVFCTHPSHGN-------------------LLYAEKIFGSI--QSPCLLAY 56
++ E+L+ FC +P GN L+ + FG + +
Sbjct: 25 KSRESLSHFWSFCPNPVSGNSPFLNFSSSSHKPLVEFARYLFMSRHFGRKYRKQDNSFIW 84
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N +IK+F+ K R+ ++F+ + E GV D F++ V KA LG +K+G ++HG + K
Sbjct: 85 NAIIKSFSHKEDPREVFVIFNLMLESGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGK 144
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
+ D ++ N +M +Y G + V++LFD M KD VS+N I G+VK + A ++
Sbjct: 145 MEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRMMKKDSVSFNSMIDGYVKHGMVKSAWEL 204
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP----IMGNALLD 232
F ++MP E ++ +S + + +E + + E P I N++++
Sbjct: 205 F-------DVMPMEQKIL--ISWNSMISEYARSEERLKVAWELFEEMPKKDLISWNSMIN 255
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
KCG + LF+ MP + V+ +MV+G+ G+++ AR LF P D++ AM
Sbjct: 256 GCVKCGKMENDHHLFNRMPKRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVISCNAM 315
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
+ YVQ E++ F +M L D L+ L+ AQLG ++G +H YI +N
Sbjct: 316 MARYVQNGYLMESLKNFHDMLSKELFLDNATLLITLSAIAQLGHFDEGVALHCYIEDNGF 375
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
++ + ALI+ YAKCG I+ AL +F ++ K W +I+ GLA++G A ELF +
Sbjct: 376 SLSEKLGVALIDTYAKCGSIDNALSVFEDIDNKSIDHWNAILSGLAIHGLGEVAFELFME 435
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M KP+DITFIGVL+AC+H GLV EG F M V +++PKL+HY C++D+LG+AG
Sbjct: 436 MEKLFVKPNDITFIGVLNACNHAGLVKEGLMCFELMKRVDKVEPKLQHYVCMVDILGQAG 495
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
++E ++ + K+ E N+++ + LLSACR + N +GE +A L ++S + S + L
Sbjct: 496 HVEETKKFVEKMSIEPNDVV---WRTLLSACRNHENFTIGEPVAKHLISVDSYNLSSYVL 552
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
L+NIYA W DV +R MK+ ++K+PGCS IE+ G +H+F V D SH + K
Sbjct: 553 LSNIYAGFGIWNDVHRIRMMMKQRDLKKIPGCSQIELEGNVHKFFVRDKSHPQAK 607
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 307/555 (55%), Gaps = 40/555 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + L++++ +I + + G +L LFSKL + P+ + Y V A
Sbjct: 57 ARQVFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACAS 113
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L + +G+++HG +K GL+ ++V N+++ MY GK + ++E + + V++N
Sbjct: 114 LKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNAL 173
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQE 219
I+G V+ + + +V R M Q PD T V L C + +L+ G+ +H + I +
Sbjct: 174 ITGFVENQQPDKGFEVLRMMYQD-GFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLK 232
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L T +GN ++ MY K L EA + F + K
Sbjct: 233 LNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEK-------------------------- 266
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALE 338
D++ W I+ N ++A+ F+EM R++PD+F + L C+ L ++
Sbjct: 267 -----DLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMC 321
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
GK IHG++ R+ D ALI MYAKCG I KA IF ++ ++ SW ++I G
Sbjct: 322 NGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFG 381
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+G KA ELF++M + G KPD +TF+G+L+A +H GLVDEG +FN+M E Y I P++
Sbjct: 382 NHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEI 441
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
EH+ CLIDLLGRAG L+EA+E ++K P ++ +++ G+LLSACR++G+VD G+ A
Sbjct: 442 EHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVL---GSLLSACRLHGDVDTGKCFARQ 498
Query: 519 LEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
L K++ +S + LL+N+YAS W+ V + +K G++K PG S IE+NG +F V
Sbjct: 499 LLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTFEKFTV 558
Query: 579 GDPSHSEMKEIYSML 593
D SHS ++EI ML
Sbjct: 559 VDFSHSRIEEIMDML 573
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 311/582 (53%), Gaps = 48/582 (8%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGE--KVHG 112
+N ++ AFA+ ++ +F L G + PD++++ + AVG + + ++H
Sbjct: 128 HNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHC 187
Query: 113 YVVKTGLEFDTYVCNSIMDMY---GVLGKICNVKKLFDEMPDKDVVSW------------ 157
V+K+G V N+++ +Y + +K+ DEMPDKD ++W
Sbjct: 188 SVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGD 247
Query: 158 -------------------NVSISGHVKCMRFEDAVDVFRRMRQGCNLMP-DEGTVVSTL 197
N ISG+V+ DA ++FRRM +P DE T S L
Sbjct: 248 VNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVS--EKVPLDEFTFTSVL 305
Query: 198 SACTALKNLELGKEIH-RYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPN 252
SAC GK +H + I + F P + NAL+ +Y K G + A+ +FD M
Sbjct: 306 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 365
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+V+ W +++SGY++ G L+KA ++F P ++ + W M++GYV ++A+ LF +M
Sbjct: 366 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM 425
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ +KP + + C +LGAL+ G+ +H ++ + AL+ MYAKCG +
Sbjct: 426 RAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAV 485
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
A +F + D+ SW ++I L +G +ALELF QM++ G PD I+F+ +L+AC
Sbjct: 486 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 545
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
+H GLVDEG +F +M + I P +HY LIDLLGR+G + EA +LI+ +P E I
Sbjct: 546 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI 605
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+ A+LS CR G+++ G A L ++ + + LL+N Y++A RW D VR+
Sbjct: 606 ---WEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKL 662
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
M++ GV+K PGCS IE+ IH FLVGD H E +E+Y L+
Sbjct: 663 MRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLE 704
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 179/367 (48%), Gaps = 17/367 (4%)
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPD--KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
S++ G++ + FD +P +D V N +S + AV VF +
Sbjct: 95 ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGK--EIH-RYINQELEFTPIMGNALLDMYCKCGCL 240
+L PD+ + + +SA + NL ++H + + NAL+ +Y KC
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214
Query: 241 S---EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
+AR++ DEMP+K+ + WT+MV GYV G + AR +F+ + V+W AMI+GYV
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI---NENRITV 354
Q +A LFR M ++ D+F ++L+ CA G GK +HG I N +
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334
Query: 355 DAV-VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
A+ V AL+ +Y+K G I A IF + KD SW +I+ G +G ++KA+E+F M
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
+D++++ ++S HGGL ++ + FN M ++P Y I G G
Sbjct: 395 ----PYKNDLSWMVMVSGYVHGGLSEDALKLFNQM-RAEDVKPCDYTYAGAIAACGELGA 449
Query: 474 LDEAEEL 480
L +L
Sbjct: 450 LKHGRQL 456
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 178/408 (43%), Gaps = 74/408 (18%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + + +N +I + + G + LF ++ V D FT+ V
Sbjct: 246 GDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 305
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEF----DTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
A G G+ VHG +++ F V N+++ +Y GKI K++FD M
Sbjct: 306 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 365
Query: 152 KDVVSWNVSISGHV------------KCMRF-------------------EDAVDVFRRM 180
KDVVSWN +SG++ K M + EDA+ +F +M
Sbjct: 366 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM 425
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGC 239
R ++ P + T ++AC L L+ G+++H ++ Q E + GNALL MY KCG
Sbjct: 426 RAE-DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+++AR +F MPN + + W +M+S GQ R
Sbjct: 485 VNDARLVFLVMPNLDSVSWNAMISAL---GQHGHGR------------------------ 517
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR---ITVDA 356
EA+ LF +M + PD+ + +LT C G +++G H + + R I+
Sbjct: 518 ----EALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG--FHYFESMKRDFGISPGE 571
Query: 357 VVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
LI++ + G I +A ++ + E + W +I+ G NG +
Sbjct: 572 DHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDM 619
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 46/351 (13%)
Query: 5 KQIQAQIFQIGLQQNPET---LNKLMVFCTHPSHGNLLYAEKIF---------------- 45
K + QI ++ PE +N +V + G ++ A++IF
Sbjct: 318 KSVHGQIIRLQPNFVPEAALPVNNALV-TLYSKGGKIVIAKRIFDTMNLKDVVSWNTILS 376
Query: 46 GSIQSPCL---------------LAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
G I S CL L++ +++ + G +L LF+++R V P ++T
Sbjct: 377 GYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYT 436
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
Y A G LG +K G ++H ++V+ G E N+++ MY G + + + +F MP
Sbjct: 437 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP 496
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELG 209
+ D VSWN IS + +A+++F +M +G + PD + ++ L+AC ++ G
Sbjct: 497 NLDSVSWNAMISALGQHGHGREALELFDQMVAEGID--PDRISFLTILTACNHAGLVDEG 554
Query: 210 KEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYV 266
+ ++ +P + L+D+ + G + EAR+L MP W +++SG
Sbjct: 555 FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCR 614
Query: 267 NCGQLE----KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
G +E A LF P D + + N Y R+ +A + + M+
Sbjct: 615 TNGDMEFGAYAADQLFRMIPQHDGT-YILLSNTYSAAGRWVDAARVRKLMR 664
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 325/606 (53%), Gaps = 53/606 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP--CLLAYNLLIKA 62
+QI A + + N LM + G + AEK F I SP L+++N +I +
Sbjct: 914 EQIHALVIKSSFAPVVPVSNSLMNM--YSKAGVVYAAEKTF--INSPELDLISWNTMISS 969
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA--VGWLGE-VKKGEKVHGYVVKTGL 119
+A+ +++ F L G+ PD FT V +A G GE G +VH Y +K G+
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D++V +++D+Y GK+ + L D D+ SWN + G++K + A++ F
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-----INQELEFTPIMGNALLDMY 234
M + + DE T+ + + A L NL+ GK+I Y N +L + + +LDMY
Sbjct: 1090 MHE-MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL----WVSSGVLDMY 1144
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KCG +MPN A +LF D V WT MI+
Sbjct: 1145 IKCG----------DMPN---------------------ALELFGEISRPDEVAWTTMIS 1173
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY++ D A++++ M++ ++PD++ L+ + L ALEQGK IH + + ++
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D V T+L++MY KCG ++ A +F ++ + W +++ GLA +G +++AL LF M
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
S G +PD +TFIGVLSACSH GL E ++F+ M + Y I P++EHY CL+D LGRAG +
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EAE +I +P + + +Y ALL ACR G+ + +++A L ++ DSS + LL+
Sbjct: 1354 QEAENVIASMPFKAS---ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLS 1410
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA++ +W+DVT+ R MK V+K PG S I++ +H F+V D SH + IY ++
Sbjct: 1411 NIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIE 1470
Query: 595 RMAKTL 600
+ K +
Sbjct: 1471 DLMKRI 1476
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 219/477 (45%), Gaps = 45/477 (9%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
YA K+F Q + A+N + F G ++ F L + D+ T + A
Sbjct: 846 YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
++ GE++H V+K+ V NS+M+MY G + +K F P+ D++SWN
Sbjct: 906 GADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNT 965
Query: 160 SISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLE---LGKEIHRY 215
IS + + +A+ FR + R G L PD+ T+ S L AC+ E LG ++H Y
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDG--LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVY 1023
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
KCG ++++ T+++ Y G++++A
Sbjct: 1024 A------------------IKCGIINDS------------FVSTALIDLYSKGGKMDEAE 1053
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
L D+ W A++ GY++ N+ +A+ F M + + D+ L + L
Sbjct: 1054 FLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLI 1113
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
L+QGK I Y + D V++ +++MY KCG + ALE+F E+ D +WT++I
Sbjct: 1114 NLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS 1173
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G NG + AL ++ M G +PD+ TF ++ A S +++G++ V ++
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH---ANVVKLD 1230
Query: 456 PKLEHY--GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
L+H+ L+D+ + G + +A + RK+ V + A+L +G+VD
Sbjct: 1231 YSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK----VVFWNAMLLGLAQHGHVD 1283
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 224/504 (44%), Gaps = 68/504 (13%)
Query: 38 LLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA 97
L ++E G ++ LL +L + + + + SF LLF + S + + + ++
Sbjct: 563 LDFSEPQPGLLRVKMLLRAHLKVPSISSRTSFACPFLLFCRFSSLSSS--SSQWFSLLRS 620
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
+ ++K G++ H +V +G D Y+ N+++ MY G +C+ +++FD+ D+D+V+W
Sbjct: 621 AIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTW 680
Query: 158 NVSISGHVKCM--RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN------LELG 209
N ++ + + +E+ ++ FR L+ + G ++ L+ LK +++
Sbjct: 681 NSILAAYAQFADSSYENVLEGFRLF----GLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 210 KEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV-N 267
+ +H Y + E + AL+++YCK G + +AR LFD+MP ++ + W M+ YV N
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 268 CGQLEKAR--DLFDRSPV------------------------------------------ 283
Q E R F RS
Sbjct: 797 SFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQG 856
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+I W + ++ + A+ F+ + + D LV +L+ L+ G+ I
Sbjct: 857 SNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI 916
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H + ++ V+ +L+ MY+K G++ A + F E D SW ++I A N
Sbjct: 917 HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLE 976
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF-FNTMTEVYQIQPKLEH-- 460
+A+ F ++ G KPD T VL ACS G DEG F + VY I+ + +
Sbjct: 977 MEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDS 1033
Query: 461 --YGCLIDLLGRAGLLDEAEELIR 482
LIDL + G +DEAE L+
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLLH 1057
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 182/425 (42%), Gaps = 73/425 (17%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N+++KA+ + ++L FS G PD V V +V K H V
Sbjct: 786 WNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQV 843
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K Y + K+F ++ +WN ++ + + A+D
Sbjct: 844 KA---------------YAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAID 880
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI--MGNALLDM 233
F+ + + + D T+V LSA +L+LG++IH + + F P+ + N+L++M
Sbjct: 881 CFKTLLR-STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNM 938
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y K G + A + F P ++I W +M+S
Sbjct: 939 YSKAGVVYAAEKTFINSPELDLISWNTMIS------------------------------ 968
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ---GKWIHGYINEN 350
Y Q N EA+ FR++ LKPD+F L ++L C+ E G +H Y +
Sbjct: 969 -SYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKC 1027
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
I D+ V+TALI++Y+K G +++A + + + D ASW +I+ G + K KALE F
Sbjct: 1028 GIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHF 1087
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
S M G D+IT + A G L++ + + QIQ G DL
Sbjct: 1088 SLMHEMGIPIDEITLATAIKAS--GCLIN--------LKQGKQIQAYAIKLGFNNDLWVS 1137
Query: 471 AGLLD 475
+G+LD
Sbjct: 1138 SGVLD 1142
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 159/333 (47%), Gaps = 23/333 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q KQIQA ++G + + + + C G++ A ++FG I P +A+
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKC-----GDMPNALELFGEISRPDEVAWT 1169
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+I + + G +L ++ +R GV PD +T+ + KA L +++G+++H VVK
Sbjct: 1170 TMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKL 1229
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
D +V S++DMY G + + ++F +M + VV WN + G + ++A+++F
Sbjct: 1230 DYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLF 1289
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE---FTPIMGN--ALLD 232
R M Q + PD+ T + LSAC+ + L E ++Y + + TP + + L+D
Sbjct: 1290 RTM-QSNGIQPDKVTFIGVLSACS---HSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVD 1345
Query: 233 MYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDR----SPVRDIV 287
+ G + EA + MP K + + +++ G E A+ + D+ P D
Sbjct: 1346 ALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDP-SDSS 1404
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+ + N Y ++D+ M++ +K D
Sbjct: 1405 AYVLLSNIYAASRQWDDVTDARNMMKLKNVKKD 1437
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 6/160 (3%)
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
+ L+ GK H I + D + LI MY+KCG + A ++F + ++D +W SI
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 394 ICGLAM--NGKINKALE---LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+ A + LE LF + G +T +L C G V
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
++ + L G L+++ + GL+ +A L K+P +
Sbjct: 744 VKI-GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERD 782
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 231/347 (66%), Gaps = 3/347 (0%)
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
MP K+++ T+M++ Y G +++AR LFD RD + W MI+GY Q +E + LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
R+M +++P++ ++A+L+ C Q GALE G+W+H YI N I ++ V T+LI+MY+KC
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
G +E A +F + KD +W S++ G AM+G AL LF +M G +P DITFIGVL
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
+ACSH GLV EG +FF +M + Y I+PK+EHYGC+++LLGRAG L+EA EL++ + + +
Sbjct: 181 NACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQD 240
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
+ L+G LL ACR++GN+ +GE++A L +S + LL+NIYA+A WE V V
Sbjct: 241 PV---LWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARV 297
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
R MKE G K PGCSSIE+N +HEFL GD H + +EIY ML+ +
Sbjct: 298 RTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEI 344
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 141/292 (48%), Gaps = 35/292 (11%)
Query: 127 NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
+++ Y G I + LFD + ++D + WNV I G+ + + + +FR+M +
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNA-KV 68
Query: 187 MPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARE 245
P+E TV++ LSAC LE G+ +H YI N + +G +L+DMY KCG L +AR
Sbjct: 69 RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128
Query: 246 LFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+F+ + NK+V+ W SMV GY ++G+ Q +A
Sbjct: 129 VFERISNKDVVAWNSMVVGYA--------------------------MHGFSQ-----DA 157
Query: 306 VALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIE 364
+ LF+EM +I +P + +L C+ G + +G K+ + +E I ++
Sbjct: 158 LRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVN 217
Query: 365 MYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMIS 415
+ + G +E+A E+ + ++D W +++ ++G I ++ ++S
Sbjct: 218 LLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVS 269
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 118/239 (49%), Gaps = 5/239 (2%)
Query: 27 MVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSP 86
M+ C + +G + A +F ++ + +N++I +A+ G + LLLF ++ V P
Sbjct: 12 MITC-YAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRP 70
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
+ T V A G G ++ G VH Y+ G+ + V S++DMY G + + + +F
Sbjct: 71 NEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVF 130
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
+ + +KDVV+WN + G+ +DA+ +F+ M P + T + L+AC+ +
Sbjct: 131 ERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCM-IGYQPTDITFIGVLNACSHAGLV 189
Query: 207 ELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMV 262
G + + E P + + ++++ + G L EA EL M +++ + W +++
Sbjct: 190 SEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLL 248
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 312/587 (53%), Gaps = 38/587 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
Q+ + GL+ + N L+ + G+L A ++F + L+ +N +I +
Sbjct: 268 SQLHGLVVSSGLEMDSPVANTLLAM--YAKCGHLFDARRLFDMMPKTDLVTWNGMISGYV 325
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G ++ LF ++ + PD+ T+ + +++G+++H Y+++ G+ D +
Sbjct: 326 QNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVF 385
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++++D+Y + +K+FD+ D+V ISG+V +A+++FR + Q
Sbjct: 386 LKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQE- 444
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF-TPIMGNALLDMYCKCGCLSEA 243
+ + T+ S L AC L L LGKE+H +I + + +G+A++DMY KCG
Sbjct: 445 RMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCG----- 499
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+L+ A F +D V W +MI Q + +
Sbjct: 500 --------------------------RLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPE 533
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ LFR+M + K D + A L+ CA L AL GK IH ++ D +ALI
Sbjct: 534 EAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALI 593
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MY+KCG ++ A +F + EK+ SW SII +G++ +L LF M+ G +PD +
Sbjct: 594 DMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHV 653
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF+ ++SAC H G VDEG +F MTE I ++EHY C++DL GRAG L+EA +I
Sbjct: 654 TFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINS 713
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + ++G LL ACR++GNV++ E + L ++ ++S ++ LL+N++A+A +W
Sbjct: 714 MPFSPD---AGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQW 770
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
E V +R MKE GV+KVPGCS I++N H F+ D SH + +IY
Sbjct: 771 ESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 817
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/575 (29%), Positives = 265/575 (46%), Gaps = 86/575 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
++Q +Q AQ+ G+ N KL+ V C G L A+ IF ++ C +N
Sbjct: 62 LSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLC-----GAFLDAKNIFYQLRLWCSEPWN 116
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+I+ F G F +LL + K+ G PD +T+P+V KA G L V G VH +
Sbjct: 117 WMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFM 176
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G E D +V +S++ Y G I + + LFD MP KD V WNV ++G+VK +++A VF
Sbjct: 177 GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVF 236
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
MR+ P+ T LS C + + G ++H ++ LE + N LL MY K
Sbjct: 237 MEMRR-TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAK 295
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD----------------- 279
CG L +AR LFD MP +++ W M+SGYV G +++A LF
Sbjct: 296 CGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSF 355
Query: 280 ---------------------RSPVR-DIVLWTAMINGYVQFNRFDEAVALFRE------ 311
R+ V D+ L +A+I+ Y + + A +F +
Sbjct: 356 LPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDI 415
Query: 312 -------------------MQIIR------LKPDKFILVALLTGCAQLGALEQGKWIHGY 346
++I R ++ + L ++L CA L AL GK +HG+
Sbjct: 416 VVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGH 475
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I +N V +A+++MYAKCG ++ A + F + +KDA W S+I + NGK +A
Sbjct: 476 ILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEA 535
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
++LF QM G K D ++ LSAC++ + G+ M + L LID
Sbjct: 536 IDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESALID 594
Query: 467 LLGRAGLLDEAEELIRKIPNENNEI----IVPLYG 497
+ + G LD A + + E NE+ I+ YG
Sbjct: 595 MYSKCGNLDLACRVFDTM-EEKNEVSWNSIIAAYG 628
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 186/405 (45%), Gaps = 48/405 (11%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+ +G + H ++ G+ ++ + ++ MY + G + K +F ++ WN I G
Sbjct: 62 LSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRG 121
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEF 222
+F+ A+ + +M GC +PD+ T + AC L ++ LG+ +H I E
Sbjct: 122 FTMMGQFDFALLFYFKML-GCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFEL 180
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+G++L+ Y + GC+ +A R LFDR P
Sbjct: 181 DVFVGSSLIKFYSENGCIHDA-------------------------------RYLFDRMP 209
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+D VLW M+NGYV+ +D A +F EM+ P+ +L+ CA + G
Sbjct: 210 SKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQ 269
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+HG + + + +D+ VA L+ MYAKCG + A +F + + D +W +I G NG
Sbjct: 270 LHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGF 329
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+++A LF +MIS KPD ITF L S G + +G+ +I + G
Sbjct: 330 MDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGK----------EIHCYIIRNG 379
Query: 463 CLIDLLGRAGLLD-----EAEELIRKIPNENNEIIVPLYGALLSA 502
+D+ ++ L+D E+ RKI ++ + + + A++S
Sbjct: 380 VSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISG 424
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
LV++L C L QG+ H + N I + ++ T L+ MY CG A IFY+LR
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ W +I G M G+ + AL + +M+ G PD TF V+ AC GGL
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC--GGL------ 160
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
N++ + K++ G +D+ + L+ K +EN I Y
Sbjct: 161 --NSVALGRVVHDKIQFMGFELDVFVGSSLI--------KFYSENGCIHDARY------- 203
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
L +++ SKD ++ N Y W++ T V +M+
Sbjct: 204 --------------LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 253/417 (60%), Gaps = 4/417 (0%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
NL PD T + C L+ G +H I E P + L+ MY + GCLS
Sbjct: 107 NLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSC 166
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+FD +++ T+M++ CG ++ AR +FD P RD V W AMI GY Q R
Sbjct: 167 HNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSR 226
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ +F MQ+ +K ++ +V +L+ C L L+ G+W+H Y+ ++ + + TAL+
Sbjct: 227 EALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALV 286
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MYAKCG +++A+++F+ ++E++ +W+S I GLAMNG ++L+LF+ M G +P+ I
Sbjct: 287 DMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGI 346
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFI VL CS GLV+EGR+ F++M VY I P+LEHYG ++D+ GRAG L EA I
Sbjct: 347 TFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINS 406
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + V + ALL ACR+Y N ++GE + ++E K+ + LL+NIYA W
Sbjct: 407 MPMRPH---VGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNW 463
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
E V+++RQ MK GV+K+PGCS IE++G +HEF+VGD SH EI L+ ++K L
Sbjct: 464 ESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCL 520
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 207/437 (47%), Gaps = 71/437 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ ++KQI AQ+ G+ NP + + + NL YA K+ +P L N +I
Sbjct: 22 LKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNPTLFTLNSMI 81
Query: 61 KAFAKKGSFRKSLLLFSKL---RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+A++K + KS ++ + +SPDN+T+ F+ + L G VHG V+K
Sbjct: 82 RAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKH 141
Query: 118 GLEFDTYVCNSIMDMYGVLGKICN-------------------------------VKKLF 146
G E D +V ++ MY LG + + +K+F
Sbjct: 142 GFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMF 201
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKN 205
DEMP++D V+WN I+G+ +C R +A+DVF M+ +G L +E ++V LSACT L+
Sbjct: 202 DEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKL--NEVSMVLVLSACTHLQV 259
Query: 206 LELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
L+ G+ +H Y+ + ++ T +G AL+DMY KCG + A ++F M +NV W+S + G
Sbjct: 260 LDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGG 319
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
+NG+ + E++ LF +M+ ++P+
Sbjct: 320 LA--------------------------MNGFGE-----ESLDLFNDMKREGVQPNGITF 348
Query: 325 VALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
+++L GC+ +G +E+G K N I +++MY + G +++AL +
Sbjct: 349 ISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMP 408
Query: 384 EK-DAASWTSIICGLAM 399
+ +W++++ M
Sbjct: 409 MRPHVGAWSALLHACRM 425
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 208/639 (32%), Positives = 325/639 (50%), Gaps = 83/639 (12%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCT------HPSHGNLLYAEKIFGSIQSPCLLAY 56
L QI Q GL + ++L++F + P H ++ ++ ++ P +
Sbjct: 19 HLLQIHGQFIASGLLADAFAASRLLLFTSATRLLPFPIH----HSFRLLRLVRCPNAFSC 74
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV------ 110
N L+KA G L L++ L SPD +T+P + A +V +G +V
Sbjct: 75 NTLLKAALLAGMPHLCLPLYTSL---PASPDTYTHPILAAACAARRDVSEGRQVQSHAIR 131
Query: 111 HGY-------------------------VVKTGLEFDTYVCNSIM--------------- 130
HG+ V G +D N+I+
Sbjct: 132 HGFGDDLYLRNALMHMYSVCGCLWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVGV 191
Query: 131 ----------------DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
++G G + + +FDE +D+ +W IS + F +A+
Sbjct: 192 FARMPKRNATAVSSMVSLFGRRGMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEAL 251
Query: 175 DVFRRMRQGCNLMP-DEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLD 232
+F MR+ + P DE +VS ++AC + + G+ H I L + N L+
Sbjct: 252 HMFSCMRR--EMWPVDEALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIH 309
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
MY C + AR LFD + W SM++GY+ G +E A LF P +D V W+ M
Sbjct: 310 MYSCCLDVVAARRLFDSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTM 369
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I+G VQ N+ A+ +F M+ ++PD+ +V++++ C L ALE+GK +H Y+ +N+
Sbjct: 370 ISGCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKC 429
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
+ V+ T+LI+MY KCG +E A+++F + EK A W ++I GLAMNG + K+LE+FS+
Sbjct: 430 YITLVLGTSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSE 489
Query: 413 M-ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
M S A P++ITF GVLSAC H GLV+EGR FF M YQI P + HYGC++DLLGRA
Sbjct: 490 MEASSTAIPNEITFTGVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRA 549
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G + EAE+LI +P + VP +GALL AC +G ++GE++ L ++ + F T
Sbjct: 550 GYVKEAEDLIESMPMSPD---VPAWGALLGACWKHGENEVGERVGRKLVNLDPRHDGFQT 606
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+L+NIYA W+ V ++R MK+ V KV G S +E++
Sbjct: 607 MLSNIYAKEGMWQSVNDLRDSMKQRHVPKVSGYSVVEMS 645
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 325/606 (53%), Gaps = 53/606 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP--CLLAYNLLIKA 62
+QI A + + N LM + G + AEK F I SP L+++N +I +
Sbjct: 914 EQIHALVIKSSFAPVVPVSNSLMNM--YSKAGVVYAAEKTF--INSPELDLISWNTMISS 969
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA--VGWLGE-VKKGEKVHGYVVKTGL 119
+A+ +++ F L G+ PD FT V +A G GE G +VH Y +K G+
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D++V +++D+Y GK+ + L D D+ SWN + G++K + A++ F
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-----INQELEFTPIMGNALLDMY 234
M + + DE T+ + + A L NL+ GK+I Y N +L + + +LDMY
Sbjct: 1090 MHE-MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL----WVSSGVLDMY 1144
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
KCG +MPN A +LF D V WT MI+
Sbjct: 1145 IKCG----------DMPN---------------------ALELFGEISRPDEVAWTTMIS 1173
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
GY++ D A++++ M++ ++PD++ L+ + L ALEQGK IH + + ++
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D V T+L++MY KCG ++ A +F ++ + W +++ GLA +G +++AL LF M
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
S G +PD +TFIGVLSACSH GL E ++F+ M + Y I P++EHY CL+D LGRAG +
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EAE +I +P + + +Y ALL ACR G+ + +++A L ++ DSS + LL+
Sbjct: 1354 QEAENVIASMPFKAS---ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLS 1410
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA++ +W+DVT+ R MK V+K PG S I++ +H F+V D SH + IY ++
Sbjct: 1411 NIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIE 1470
Query: 595 RMAKTL 600
+ K +
Sbjct: 1471 DLMKRI 1476
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 219/477 (45%), Gaps = 45/477 (9%)
Query: 40 YAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVG 99
YA K+F Q + A+N + F G ++ F L + D+ T + A
Sbjct: 846 YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
++ GE++H V+K+ V NS+M+MY G + +K F P+ D++SWN
Sbjct: 906 GADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNT 965
Query: 160 SISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLE---LGKEIHRY 215
IS + + +A+ FR + R G L PD+ T+ S L AC+ E LG ++H Y
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDG--LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVY 1023
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
KCG ++++ T+++ Y G++++A
Sbjct: 1024 A------------------IKCGIINDS------------FVSTALIDLYSKGGKMDEAE 1053
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
L D+ W A++ GY++ N+ +A+ F M + + D+ L + L
Sbjct: 1054 FLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLI 1113
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
L+QGK I Y + D V++ +++MY KCG + ALE+F E+ D +WT++I
Sbjct: 1114 NLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS 1173
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G NG + AL ++ M G +PD+ TF ++ A S +++G++ V ++
Sbjct: 1174 GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH---ANVVKLD 1230
Query: 456 PKLEHY--GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
L+H+ L+D+ + G + +A + RK+ V + A+L +G+VD
Sbjct: 1231 YSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK----VVFWNAMLLGLAQHGHVD 1283
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 224/504 (44%), Gaps = 68/504 (13%)
Query: 38 LLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA 97
L ++E G ++ LL +L + + + + SF LLF + S + + + ++
Sbjct: 563 LDFSEPQPGLLRVKMLLRAHLKVPSISSRTSFACPFLLFCRFSSLSSS--SSQWFSLLRS 620
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
+ ++K G++ H +V +G D Y+ N+++ MY G +C+ +++FD+ D+D+V+W
Sbjct: 621 AIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTW 680
Query: 158 NVSISGHVKCM--RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN------LELG 209
N ++ + + +E+ ++ FR L+ + G ++ L+ LK +++
Sbjct: 681 NSILAAYAQFADSSYENVLEGFRLF----GLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 210 KEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV-N 267
+ +H Y + E + AL+++YCK G + +AR LFD+MP ++ + W M+ YV N
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 268 CGQLEKAR--DLFDRSPV------------------------------------------ 283
Q E R F RS
Sbjct: 797 SFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQG 856
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+I W + ++ + A+ F+ + + D LV +L+ L+ G+ I
Sbjct: 857 SNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI 916
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H + ++ V+ +L+ MY+K G++ A + F E D SW ++I A N
Sbjct: 917 HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLE 976
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF-FNTMTEVYQIQPKLEH-- 460
+A+ F ++ G KPD T VL ACS G DEG F + VY I+ + +
Sbjct: 977 MEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDS 1033
Query: 461 --YGCLIDLLGRAGLLDEAEELIR 482
LIDL + G +DEAE L+
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLLH 1057
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 182/425 (42%), Gaps = 73/425 (17%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N+++KA+ + ++L FS G PD V V +V K H V
Sbjct: 786 WNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQV 843
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K Y + K+F ++ +WN ++ + + A+D
Sbjct: 844 KA---------------YAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAID 880
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI--MGNALLDM 233
F+ + + + D T+V LSA +L+LG++IH + + F P+ + N+L++M
Sbjct: 881 CFKTLLR-STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNM 938
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y K G + A + F P ++I W +M+S
Sbjct: 939 YSKAGVVYAAEKTFINSPELDLISWNTMIS------------------------------ 968
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ---GKWIHGYINEN 350
Y Q N EA+ FR++ LKPD+F L ++L C+ E G +H Y +
Sbjct: 969 -SYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKC 1027
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
I D+ V+TALI++Y+K G +++A + + + D ASW +I+ G + K KALE F
Sbjct: 1028 GIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHF 1087
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
S M G D+IT + A G L++ + + QIQ G DL
Sbjct: 1088 SLMHEMGIPIDEITLATAIKAS--GCLIN--------LKQGKQIQAYAIKLGFNNDLWVS 1137
Query: 471 AGLLD 475
+G+LD
Sbjct: 1138 SGVLD 1142
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 159/333 (47%), Gaps = 23/333 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q KQIQA ++G + + + + C G++ A ++FG I P +A+
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKC-----GDMPNALELFGEISRPDEVAWT 1169
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+I + + G +L ++ +R GV PD +T+ + KA L +++G+++H VVK
Sbjct: 1170 TMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKL 1229
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
D +V S++DMY G + + ++F +M + VV WN + G + ++A+++F
Sbjct: 1230 DYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLF 1289
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE---FTPIMGN--ALLD 232
R M Q + PD+ T + LSAC+ + L E ++Y + + TP + + L+D
Sbjct: 1290 RTM-QSNGIQPDKVTFIGVLSACS---HSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVD 1345
Query: 233 MYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKARDLFDR----SPVRDIV 287
+ G + EA + MP K + + +++ G E A+ + D+ P D
Sbjct: 1346 ALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDP-SDSS 1404
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+ + N Y ++D+ M++ +K D
Sbjct: 1405 AYVLLSNIYAASRQWDDVTDARNMMKLKNVKKD 1437
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 6/160 (3%)
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
+ L+ GK H I + D + LI MY+KCG + A ++F + ++D +W SI
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 394 ICGLAM--NGKINKALE---LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+ A + LE LF + G +T +L C G V
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
++ + L G L+++ + GL+ +A L K+P +
Sbjct: 744 VKI-GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERD 782
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 301/558 (53%), Gaps = 34/558 (6%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
K+F + + + + +I + G L FS + V D++ Y KA G
Sbjct: 172 KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+ G +H +K G + +++V NS+ MY GK+ F +M DVVSW ++
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
+++ + + + F+RMR N++P+E T + +S C L+ G+++H ++
Sbjct: 292 AYIQMGKEDCGLQAFKRMR-ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHV------ 344
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
C A + + S+++ Y CG+L +F
Sbjct: 345 -------------LCVGFVNALSVAN-----------SIMTLYSKCGELASVSKVFCSMK 380
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RDI+ W+ +I Y Q +EA M+ KP++F L ++L+ C + LEQGK
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H ++ + ++V +ALI MYAKCG I +A +IF + + D SWT++I G A +G
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+A+ELF + G +PD +TFIGVL+ACSH G+VD G +FN+M++ Y I P EHYG
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C+IDLL RAG L +AE LIR +P + ++++ + LL ACRI+G+VD G++ AA + K+
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVV---WSTLLRACRIHGDVDCGQRAAAEVLKL 617
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
+ + H LANI+A+ +W++ N+R MK GV K PG SS+++ + F+ GD S
Sbjct: 618 DPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRS 677
Query: 583 HSEMKEIYSMLDRMAKTL 600
H + ++IY++L+ +A +
Sbjct: 678 HPQGEDIYNILEELASGM 695
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 190/403 (47%), Gaps = 37/403 (9%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ I Q + G +N N L + G L Y F +++ ++++ ++ A+
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTM--YNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYI 294
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G L F ++R V P+ +T+ V +K GE++H +V+ G
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NSIM +Y G++ +V K+F M +D+++W+ I+ + + E+A + RMR
Sbjct: 355 VANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSE- 413
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
P+E + S LS C ++ LE GK++H ++ + LE T ++ +AL+ MY KCG ++EA
Sbjct: 414 GPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++F + ++I WT+M+SGY G +
Sbjct: 474 SKIFMDSWKDDIISWTAMISGYAEHGHSQ------------------------------- 502
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATAL 362
EA+ LF +Q + L+PD + +LT C+ G ++ G + ++++ IT +
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCM 562
Query: 363 IEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKIN 404
I++ + G + A + + + D W++++ ++G ++
Sbjct: 563 IDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVD 605
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 197/442 (44%), Gaps = 35/442 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVG 99
A +F + +++ +I + ++L LFSK+R + + D F K G
Sbjct: 68 ARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG 127
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
G +HG+ VK GL +V ++++DMY +G+I K+FDEMP ++ V+W
Sbjct: 128 LGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTA 187
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQ 218
I+G V+ E + F M + + D L A L G+ IH + + +
Sbjct: 188 VITGLVRAGYSEAGLAYFSGMGRS-KVEYDSYAYAIALKASADSGALNHGRSIHTQTLKK 246
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
+ + N+L MY KCG L F +M +V+ WT++V+
Sbjct: 247 GFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT--------------- 291
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
Y+Q + D + F+ M+ + P+++ A+++ CA L+
Sbjct: 292 ----------------AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ +H ++ VA +++ +Y+KCG + ++F ++ +D +W++II +
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
G +A E S+M S G KP++ VLS C ++++G++ + V Q +
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 459 EHYGCLIDLLGRAGLLDEAEEL 480
LI + + G + EA ++
Sbjct: 456 V-CSALIIMYAKCGSIAEASKI 476
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 32/295 (10%)
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
+ + LFD++P +D VSW ISG+V +A+ +F +MR L D + L C
Sbjct: 67 DARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTC 126
Query: 201 TALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
N G +H + + L + +G+ALLDMY K G + + ++FDEMP +N + WT
Sbjct: 127 GLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWT 186
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
++++G V G E +A F M +++
Sbjct: 187 AVITGLVRAGYSEA-------------------------------GLAYFSGMGRSKVEY 215
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D + L A GAL G+ IH + ++ VA +L MY KCG ++ L F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
++R D SWT+I+ GK + L+ F +M + P++ TF V+S C++
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 141/281 (50%), Gaps = 11/281 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A + +G N +M + G L K+F S++ ++ ++ +I A++
Sbjct: 338 EQLHAHVLCVGFVNALSVANSIMTL--YSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G ++ S++R G P+ F V G + +++G+++H +V+ GLE +
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
VC++++ MY G I K+F + D++SW ISG+ + ++A+++F + Q
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENI-QKV 514
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
L PD T + L+AC+ ++LG ++++ TP + ++D+ C+ G L +
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHD 574
Query: 243 ARELFDEMPNK-NVICWTSM-----VSGYVNCGQLEKARDL 277
A L MP + + + W+++ + G V+CGQ A L
Sbjct: 575 AETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVL 615
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 37/286 (12%)
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFIL 324
V L+ ARDLFD+ P RD V WT +I+GYV + EA+ LF +M++ L+ D F+L
Sbjct: 60 VKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLL 119
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
L C G +HG+ + + V +AL++MY K G I ++ ++F E+
Sbjct: 120 SLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPT 179
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
++A +WT++I GL G L FS M + D + L A + G ++ GR
Sbjct: 180 RNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSI 239
Query: 445 F---------------NTMTEVYQIQPKLEH---------------YGCLIDLLGRAGLL 474
N++T +Y KL++ + ++ + G
Sbjct: 240 HTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKE 299
Query: 475 DEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAA 517
D + +++ N ++P + A++S C + + GE+L A
Sbjct: 300 DCGLQAFKRMRASN---VIPNEYTFSAVISCCANFARLKWGEQLHA 342
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQ+ A + +GL+Q + L++ + G++ A KIF ++++ +I
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIM--YAKCGSIAEASKIFMDSWKDDIISWTAMI 492
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ G ++++ LF +++ G+ PD+ T+ V A G V G+ +
Sbjct: 493 SGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDL-----GFYYFNSMS 547
Query: 121 FDTYVCNS------IMDMYGVLGKICNVKKLFDEMPDK-DVVSWNV-----SISGHVKC 167
D ++ S ++D+ G++ + + L MP + D V W+ I G V C
Sbjct: 548 KDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDC 606
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
VD A +++ K ++ A ++F +L ++D SWT+II G + ++AL LFS+M
Sbjct: 47 VDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM 106
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 326/607 (53%), Gaps = 43/607 (7%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL-LFSKLRERG--VSPDNFTYPF 93
NL A ++F S S L+ YN ++ + + + L LF +++ D F+
Sbjct: 69 NLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSLTR 128
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD------ 147
+ L G+++H Y+VKT + +S++DMY G V ++FD
Sbjct: 129 MLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCAGVL 188
Query: 148 ---------------------------EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
++ DVVSWN ISG+V+ EDA+ +F M
Sbjct: 189 DLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDALKLFVHM 248
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
+ + +E T+ LSAC L++L+LGKE+H ++ EL F P + + L+D+YCKCG
Sbjct: 249 EEN-EVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKCGN 307
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ A ++ + N TSM+ G+ + G + +AR LFD + ++WTA+ GYV+
Sbjct: 308 MKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKS 367
Query: 300 NRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ + L E ++ + PD IL+++L CA AL GK IH Y+ I +D +
Sbjct: 368 QQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIELDEKL 427
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
+A+++MY+K G I+ A +IF + +DA + + G A +G N+A++ F +M+ G
Sbjct: 428 VSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGV 487
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PD +TF+ +LSAC H GLV+ G ++F +MT+ Y I P+++HY C+IDL GRA L++A
Sbjct: 488 RPDAVTFVALLSACRHCGLVELGEKYFASMTD-YNILPEIDHYACMIDLYGRANQLEKAV 546
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
+++IP E + +I+ GA L+ACRI N + + + +IE + + + LAN+YA
Sbjct: 547 AFMKRIPIEPDAVIL---GAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANVYA 603
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
+ +W ++ +R+KM+E ++K GCS + + +H F GD SHS + IYS+L +
Sbjct: 604 AEGKWVEMGRIRRKMRENEIKKFAGCSWVYVENRVHIFTSGDSSHSSAEAIYSILLILTA 663
Query: 599 TLLDSKQ 605
L D+ +
Sbjct: 664 ELNDTAR 670
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 242/542 (44%), Gaps = 103/542 (19%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+K G + H + +K G+ + N ++ +Y G + KLFDEMP+++V +WN I
Sbjct: 4 IKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWA 63
Query: 164 HVKCMRFEDAVDVF-----------RRMRQG--------CNLMP--------------DE 190
++K + A ++F M G N + DE
Sbjct: 64 YIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDE 123
Query: 191 GTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
++ L+ L GK++H Y + + ++L+DMY KCGC E ++FD
Sbjct: 124 FSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDG 183
Query: 250 MPNK-NVICWTSMVSGYVNCGQLEKARDLFDRS-PVRDIVLWTAMINGYVQFNRFDEAVA 307
+++ +MV+ G+LE +LF R + D+V W +I+GYVQ ++A+
Sbjct: 184 CAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDALK 243
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
LF M+ ++ ++ + LL+ CA L +L+ GK +HG++ + + + +++ L+++Y
Sbjct: 244 LFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYC 303
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF-----------SQMISG 416
KCG ++ A ++ + +A S TS+I G + G + +A LF + + +G
Sbjct: 304 KCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTG 363
Query: 417 GAK---------------------PDDITFIGVLSACSHGGLVDEGRRFFNTMTEV-YQI 454
K PD + I VL AC+ ++ G++ + + ++
Sbjct: 364 YVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIEL 423
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN------------------ENNEI----- 491
KL ++D+ ++G + AE++ +++ N EN I
Sbjct: 424 DEKL--VSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEE 481
Query: 492 -----IVP---LYGALLSACRIYGNVDMGEK-LAALLEKIESKDSSFHTLLANIYASANR 542
+ P + ALLSACR G V++GEK A++ + + + + ++Y AN+
Sbjct: 482 MLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMTDYNILPEIDHYACMIDLYGRANQ 541
Query: 543 WE 544
E
Sbjct: 542 LE 543
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 37/268 (13%)
Query: 203 LKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+++++ G H + I + T N L+ +Y K G L+EA +LFDEMP +NV W ++
Sbjct: 1 MRSIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAI 60
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD-EAVALFREMQII--RLK 318
+ Y+ L++AR+LFD +P +D+V + +M++GY+ + ++ A+ LF EMQ + +
Sbjct: 61 IWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETR 120
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
D+F L +L A+L GK +H Y+ + + ++LI+MY+KCG + ++
Sbjct: 121 IDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQV 180
Query: 379 F---------------------------------YELREKDAASWTSIICGLAMNGKINK 405
F +L D SW ++I G NG
Sbjct: 181 FDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEED 240
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACS 433
AL+LF M + ++ T G+LSAC+
Sbjct: 241 ALKLFVHMEENEVRWNEHTIAGLLSACA 268
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 131/318 (41%), Gaps = 47/318 (14%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFT 90
H S GN+ A ++F S+ + + L + K L S+ R + + PD
Sbjct: 333 HSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKSQQCEAVFELLSEFRVKEAMVPDALI 392
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
V A + G+++H YV++ G+E D + ++++DMY G I +K+F +
Sbjct: 393 LISVLGACAIQAALNPGKQIHAYVLRIGIELDEKLVSAMVDMYSKSGNIKYAEKIFQRVT 452
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
++D V +N+ +G+ A+ F M + + PD T V+ LSAC
Sbjct: 453 NRDAVIYNIMTAGYAHHGHENQAIQQFEEMLER-GVRPDAVTFVALLSACR--------- 502
Query: 211 EIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI----CWTSMVSGYV 266
CG + + F M + N++ + M+ Y
Sbjct: 503 -------------------------HCGLVELGEKYFASMTDYNILPEIDHYACMIDLYG 537
Query: 267 NCGQLEKARDLFDRSPVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
QLEKA R P+ D V+ A +N + NR + +A E +I+R++ D
Sbjct: 538 RANQLEKAVAFMKRIPIEPDAVILGAFLNA-CRINR-NTKLAREAEEKILRIEGDN---G 592
Query: 326 ALLTGCAQLGALEQGKWI 343
A A + A E GKW+
Sbjct: 593 ARYVQLANVYAAE-GKWV 609
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 301/558 (53%), Gaps = 34/558 (6%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
K+F + + + + +I + G L FS + V D++ Y KA G
Sbjct: 172 KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+ G +H +K G + +++V NS+ MY GK+ F +M DVVSW ++
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
+++ + + + F+RMR N++P+E T + +S C L+ G+++H ++
Sbjct: 292 AYIQMGKEDCGLQAFKRMR-ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHV------ 344
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
C A + + S+++ Y CG+L +F
Sbjct: 345 -------------LCVGFVNALSVAN-----------SIMTLYSKCGELASVSKVFCSMK 380
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
RDI+ W+ +I Y Q +EA M+ KP++F L ++L+ C + LEQGK
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H ++ + ++V +ALI MYAKCG I +A +IF + + D SWT++I G A +G
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+A+ELF + G +PD +TFIGVL+ACSH G+VD G +FN+M++ Y I P EHYG
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C+IDLL RAG L +AE LIR +P + ++++ + LL ACRI+G+VD G++ AA + K+
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVV---WSTLLRACRIHGDVDCGQRAAAEVLKL 617
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
+ + H LANI+A+ +W++ N+R MK GV K PG SS+++ + F+ GD S
Sbjct: 618 DPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRS 677
Query: 583 HSEMKEIYSMLDRMAKTL 600
H + ++IY++L+ +A +
Sbjct: 678 HPQGEDIYNILEELASGM 695
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 198/442 (44%), Gaps = 35/442 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVG 99
A +F + +++ +I + ++L LFSK+R + + D F K G
Sbjct: 68 ARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG 127
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
G +HG+ VKTGL +V ++++DMY +G+I K+FDEMP ++ V+W
Sbjct: 128 LGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTA 187
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQ 218
I+G V+ E + F M + + D L A L G+ IH + + +
Sbjct: 188 VITGLVRAGYSEAGLAYFSGMGRS-KVEYDSYAYAIALKASADSGALNHGRSIHTQTLKK 246
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
+ + N+L MY KCG L F +M +V+ WT++V+
Sbjct: 247 GFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT--------------- 291
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
Y+Q + D + F+ M+ + P+++ A+++ CA L+
Sbjct: 292 ----------------AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ +H ++ VA +++ +Y+KCG + ++F ++ +D +W++II +
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
G +A E S+M S G KP++ VLS C ++++G++ + V Q +
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 459 EHYGCLIDLLGRAGLLDEAEEL 480
LI + + G + EA ++
Sbjct: 456 V-CSALIIMYAKCGSIAEASKI 476
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 190/403 (47%), Gaps = 37/403 (9%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ I Q + G +N N L + G L Y F +++ ++++ ++ A+
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTM--YNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYI 294
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G L F ++R V P+ +T+ V +K GE++H +V+ G
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NSIM +Y G++ +V K+F M +D+++W+ I+ + + E+A + RMR
Sbjct: 355 VANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSE- 413
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
P+E + S LS C ++ LE GK++H ++ + LE T ++ +AL+ MY KCG ++EA
Sbjct: 414 GPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++F + ++I WT+M+SGY G +
Sbjct: 474 SKIFMDSWKDDIISWTAMISGYAEHGHSQ------------------------------- 502
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATAL 362
EA+ LF +Q + L+PD + +LT C+ G ++ G + ++++ IT +
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCM 562
Query: 363 IEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKIN 404
I++ + G + A + + + D W++++ ++G ++
Sbjct: 563 IDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVD 605
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 32/295 (10%)
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
+ + LFD++P +D VSW ISG+V +A+ +F +MR L D + L C
Sbjct: 67 DARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTC 126
Query: 201 TALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
N G +H + + L + +G+ALLDMY K G + + ++FDEMP +N + WT
Sbjct: 127 GLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWT 186
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
++++G V G E +A F M +++
Sbjct: 187 AVITGLVRAGYSEA-------------------------------GLAYFSGMGRSKVEY 215
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D + L A GAL G+ IH + ++ VA +L MY KCG ++ L F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
++R D SWT+I+ GK + L+ F +M + P++ TF V+S C++
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 141/281 (50%), Gaps = 11/281 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A + +G N +M + G L K+F S++ ++ ++ +I A++
Sbjct: 338 EQLHAHVLCVGFVNALSVANSIMTL--YSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G ++ S++R G P+ F V G + +++G+++H +V+ GLE +
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
VC++++ MY G I K+F + D++SW ISG+ + ++A+++F + Q
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENI-QKV 514
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
L PD T + L+AC+ ++LG ++++ TP + ++D+ C+ G L +
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHD 574
Query: 243 ARELFDEMPNK-NVICWTSM-----VSGYVNCGQLEKARDL 277
A L MP + + + W+++ + G V+CGQ A L
Sbjct: 575 AETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVL 615
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 37/286 (12%)
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFIL 324
V L+ ARDLFD+ P RD V WT +I+GYV + EA+ LF +M++ L+ D F+L
Sbjct: 60 VKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLL 119
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
L C G +HG+ + + V +AL++MY K G I ++ ++F E+
Sbjct: 120 SLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPT 179
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
++A +WT++I GL G L FS M + D + L A + G ++ GR
Sbjct: 180 RNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSI 239
Query: 445 F---------------NTMTEVYQIQPKLEH---------------YGCLIDLLGRAGLL 474
N++T +Y KL++ + ++ + G
Sbjct: 240 HTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKE 299
Query: 475 DEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAA 517
D + +++ N ++P + A++S C + + GE+L A
Sbjct: 300 DCGLQAFKRMRASN---VIPNEYTFSAVISCCANFARLKWGEQLHA 342
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQ+ A + +GL+Q + L++ + G++ A KIF ++++ +I
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIM--YAKCGSIAEASKIFMDSWKDDIISWTAMI 492
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A+ G ++++ LF +++ G+ PD+ T+ V A G V G+ +
Sbjct: 493 SGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDL-----GFYYFNSMS 547
Query: 121 FDTYVCNS------IMDMYGVLGKICNVKKLFDEMPDK-DVVSWNV-----SISGHVKC 167
D ++ S ++D+ G++ + + L MP + D V W+ I G V C
Sbjct: 548 KDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDC 606
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
VD A +++ K ++ A ++F +L ++D SWT+II G + ++AL LFS+M
Sbjct: 47 VDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM 106
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/477 (37%), Positives = 289/477 (60%), Gaps = 13/477 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+++H Y ++ GL+ ++ ++ + L C LFD++P V +N I
Sbjct: 5 KQIHAYSLRNGLDHTKFLIEKLLQLPD-LPYACT---LFDQIPKPSVYLYNKFIQTFSSI 60
Query: 168 MRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM 226
++ +M QGC+ P++ + AC +L N+ G+ +H + + + +
Sbjct: 61 GHPHRCWLLYCQMCSQGCS--PNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMF 118
Query: 227 G-NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
ALLDMY K G L AR+LFDEMP +++ W S+++GY G +E A +LF++ PVR+
Sbjct: 119 AMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRN 178
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIH 344
++ WTA+I+GY Q ++ +A+ +F ++ + KP++ + ++L C+QLGAL+ GK I
Sbjct: 179 VISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIE 238
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKI 403
Y N +A V+ A++E++A+CG IE+A ++F E+ +++ SW ++I GLA++G+
Sbjct: 239 AYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRC 298
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
AL+L+ QM+ +PDD+TF+G+L AC+HGG+V EGR+ F +M +Q+ PKLEHYGC
Sbjct: 299 IDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGC 358
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
L+DLLGRAG L EA LI+ +P + +I +G LL AC +GNV++GE A L K+E
Sbjct: 359 LVDLLGRAGELQEAYNLIQNMPMAPDSVI---WGTLLGACSFHGNVELGEVAAESLFKLE 415
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
+ + +L+NIYA A W V +R+ MK + K G S IE+ IHEF+V D
Sbjct: 416 PWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVED 472
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 201/441 (45%), Gaps = 78/441 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQI A + GL + KL+ +L YA +F I P + YN I
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQL------PDLPYACTLFDQIPKPSVYLYNKFI 54
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ F+ G + LL+ ++ +G SP+ +++ F+F A L V G+ +H + K+G
Sbjct: 55 QTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFA 114
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D + +++DMY LG + + ++LFDEMP +D+ +WN I+G+ + E A+++F +M
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 181 ---------------------------------RQGCNLMPDEGTVVSTLSACTALKNLE 207
+G P+E ++ S L AC+ L L+
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTK--PNEVSIASVLPACSQLGALD 232
Query: 208 LGKEIHRYINQELEF-TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVIC-WTSMVSGY 265
+GK I Y F + NA+L+++ +CG + EA+++FDE+ +K +C W +M+ G
Sbjct: 233 IGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGL 292
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G R +A+ L+ +M I +++PD V
Sbjct: 293 AVHG-------------------------------RCIDALQLYDQMLIRKMRPDDVTFV 321
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELR 383
LL C G + +G+ + + E++ V + L+++ + G +++A + +
Sbjct: 322 GLLLACTHGGMVAEGRQLFESM-ESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMP 380
Query: 384 -EKDAASWTSIICGLAMNGKI 403
D+ W +++ + +G +
Sbjct: 381 MAPDSVIWGTLLGACSFHGNV 401
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 306/559 (54%), Gaps = 40/559 (7%)
Query: 44 IFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVGWLG 102
+ S +P YN+ I+ FA L S LR E V PD +T PF+ A
Sbjct: 72 LLSSHPAPTAFTYNVTIRLFASSRPDTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAARCP 131
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
H + K GL + +S++ MY L +++FD + +DVVSWN +
Sbjct: 132 APALARSAHALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISHRDVVSWNSMVK 191
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LE 221
+ + + + R M + P+ T+ L+AC NL LG+ + ++ +E
Sbjct: 192 AYERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGME 251
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
++G+AL+ MY KCG ++EAR +FD + +K+V+ W +M++GY G
Sbjct: 252 VDSLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGM----------- 300
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
+EA+ALF M+ L PDK LV +L+ CA +GAL+ G
Sbjct: 301 --------------------SNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGV 340
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+ Y + + V TAL++MYAKCG +EKA +F ++ K+ ASW ++ICGLA NG
Sbjct: 341 ELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLAFNG 400
Query: 402 KINKALELFSQMIS-GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
+ A++ F M G +PDDITFIGVLSAC H GL++ GR+ FN++T V++I P++EH
Sbjct: 401 RGYDAIQQFELMRDEKGLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEH 460
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y C++DLL RAG L+EA + I ++P + + +++ GALL+ACR N ++GE++ +
Sbjct: 461 YSCIVDLLARAGHLEEAWDFIEEMPGKVDAVML---GALLAACRKCKNTEVGERVINRIM 517
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG- 579
K+E +S + + + IYA++++ ++ + M+E GV K PGCS +E+NG + EF
Sbjct: 518 KLEPSNSWNYVVSSKIYATSDKMDESARMIGLMRERGVNKTPGCSWVEVNGKVLEFYAST 577
Query: 580 DPSHS--EMKEIYSMLDRM 596
+P H +M ++ +LD++
Sbjct: 578 EPQHGAEDMYQLMGVLDKV 596
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 187/384 (48%), Gaps = 36/384 (9%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ A + +IGL + T++ L+ + + L A ++F I ++++N ++KA+
Sbjct: 137 RSAHALLEKIGLGDHDHTVHSLITM--YSCLDDHLAARRVFDGISHRDVVSWNSMVKAYE 194
Query: 65 KKGSFRK-SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G + +L S + E V+P+ T V A G + G V +V G+E D+
Sbjct: 195 RAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDS 254
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+ ++++ MY G++ +++FD + KDVV+WN I+G+ + +A+ +F MR+
Sbjct: 255 LIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMREA 314
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSE 242
L PD+ T+V LS+C A+ L+LG E+ Y + + L +G AL+DMY KCG L +
Sbjct: 315 -GLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEK 373
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F +MP KN W +++ G G+ GY +F
Sbjct: 374 ATHVFGKMPFKNEASWNALICGLAFNGR------------------------GYDAIQQF 409
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATA 361
+ L R+ + L+PD + +L+ C G LE G+ + + +I +
Sbjct: 410 E----LMRDEK--GLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSC 463
Query: 362 LIEMYAKCGLIEKALEIFYELREK 385
++++ A+ G +E+A + E+ K
Sbjct: 464 IVDLLARAGHLEEAWDFIEEMPGK 487
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 15/288 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A ++F I+ ++A+N +I +A+ G +++ LF +RE G+ PD T V
Sbjct: 268 GEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVL 327
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ +G +K G ++ Y ++ GL + YV +++DMY G + +F +MP K+
Sbjct: 328 SSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEA 387
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G R DA+ F MR L PD+ T + LSAC LE G+++
Sbjct: 388 SWNALICGLAFNGRGYDAIQQFELMRDEKGLQPDDITFIGVLSACVHAGLLEYGRQLFNS 447
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ + P + + ++D+ + G L EA + +EMP K + + ++++ C E
Sbjct: 448 LTPVFKIIPRIEHYSCIVDLLARAGHLEEAWDFIEEMPGKVDAVMLGALLAACRKCKNTE 507
Query: 273 KARDLFDR----SPVRDIVLWTAMING--YVQFNRFDEA---VALFRE 311
+ +R P W +++ Y ++ DE+ + L RE
Sbjct: 508 VGERVINRIMKLEPSNS---WNYVVSSKIYATSDKMDESARMIGLMRE 552
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 208/638 (32%), Positives = 340/638 (53%), Gaps = 64/638 (10%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ A + ++GL + + L+ C H + ++ E GS+ ++++ LI A
Sbjct: 73 QVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVD---VVSWTALISA 129
Query: 63 FAKKGSFRKSLLLFSKLRER---------GVSPDNFTYPFVFKAVGWLGE-VKKGEKVHG 112
++ G ++ F ++R GV + AVG +++G VHG
Sbjct: 130 YSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHG 189
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMRF 170
VVK G T++ NS++ MY + ++F+ +P +DVVSWN ISG
Sbjct: 190 LVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEA 249
Query: 171 EDAVDVFRRM-RQGCNLM-PDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN 228
E A+ F M +G + + P+ TV++ L +C L +E +H YI+ +
Sbjct: 250 ERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVA-- 307
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
K+V+ T+++ + CG L AR++FD +++V
Sbjct: 308 ------------------------KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVC 343
Query: 289 WTAMINGYVQFNRFDEAVALFREMQI------IRLKPDKFILVALLTGCAQLGALEQGKW 342
W+AMI GY Q + +EA+ LFR+M + + +KP+ LV+++ C++LGA
Sbjct: 344 WSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASM 403
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE--KDAASWTSIICGLAMN 400
IH Y + DA +A+ALI+M AKCG IE ++F E+ E + SW+S+I ++
Sbjct: 404 IHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIH 463
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ +ALELFS+M +GG +P++IT+I VLSACSH GLV++G+ FN+M + Y + P +H
Sbjct: 464 GEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKH 523
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y CL+DLLGRAG LDEA +I +P + + + L+G+LL+AC ++GN +GE + +
Sbjct: 524 YACLVDLLGRAGHLDEAHNVILNMPIKAD---LALWGSLLAACHLHGNCKLGEIVEKKIL 580
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++S H LLAN+Y A RW+DV +R +++ G+RK+PG S IEI ++ F+ D
Sbjct: 581 SLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAED 640
Query: 581 PSHSEMKEIYSMLD-------RMAKTLLDSKQNAMEGD 611
SH E + IY LD + AK + ++ N +GD
Sbjct: 641 RSHPESEMIYKELDGLDERVRKAAKYVTETGLNVEDGD 678
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 227/489 (46%), Gaps = 64/489 (13%)
Query: 47 SIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
SI +N LI A + + +L F++++ V +NFT+P + KA L +
Sbjct: 12 SISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK--DVVSWNVSISGH 164
+VH Y+ + GL D + +++D YG G ++FDEMP+ DVVSW IS +
Sbjct: 71 TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130
Query: 165 VKCMRFEDAVDVFRRMR--------QGCNL-MPDEGTVVSTLSACTALKNLELGKEIHR- 214
++A F RMR + C + + G +VS + L G +H
Sbjct: 131 SSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVNCGQLE 272
+ + +GN+++ MY C + A +F+ +P ++V+ W S++SG+ G+ E
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAE 250
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+A F+ D+V E + ++P++ ++ALL CA
Sbjct: 251 RALRTFE-----DMV---------------SEGTSA--------VEPNRVTVIALLKSCA 282
Query: 333 QLGALEQGKWIHGYINENR----ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+LG +E W+H YI+ + D VV TAL++M+A+CG + A EIF + K+
Sbjct: 283 ELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVV 342
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGG------AKPDDITFIGVLSACSHGGLVDEGR 442
W+++I G +AL LF QM+ G KP+ +T + V++ACS G
Sbjct: 343 CWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSA- 401
Query: 443 RFFNTMTEVYQIQPKLEH----YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
+M Y + L+ LID+ + G ++ ++ ++ +E+ +V + +
Sbjct: 402 ----SMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEM-DESTRTVVS-WSS 455
Query: 499 LLSACRIYG 507
++ A I+G
Sbjct: 456 MIGAEGIHG 464
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 210/638 (32%), Positives = 343/638 (53%), Gaps = 64/638 (10%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVF---CTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q+ A + ++GL + + L+ C H + ++ E GS+ ++++ LI A
Sbjct: 73 QVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVD---VVSWTALISA 129
Query: 63 FAKKGSFRKSLLLFSKLRER---------GVSPDNFTYPFVFKAVGWLGE-VKKGEKVHG 112
++ G ++ F ++R GV + AVG +++G VHG
Sbjct: 130 YSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHG 189
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMRF 170
VVK G T++ NS++ MY + ++F+ +P +DVVSWN ISG
Sbjct: 190 LVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEA 249
Query: 171 EDAVDVFRRM-RQGCNLM-PDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN 228
E A+ F M +G + + P+ TV++ L +C L +E +H YI+ +
Sbjct: 250 ERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSR-------HS 302
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+LL K+V+ T+++ + CG L AR++FD +++V
Sbjct: 303 SLL-------------------VAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVC 343
Query: 289 WTAMINGYVQFNRFDEAVALFREMQI------IRLKPDKFILVALLTGCAQLGALEQGKW 342
W+AMI GY Q + +EA+ LFR+M + + +KP+ LV+++ C++LGA
Sbjct: 344 WSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASM 403
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE--KDAASWTSIICGLAMN 400
IH Y + DA +A+ALI+M AKCG IE ++F E+ E + SW+S+I ++
Sbjct: 404 IHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIH 463
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G+ +ALELFS+M +GG +P++IT+I VLSACSH GLV++G+ FN+M + Y + P +H
Sbjct: 464 GEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKH 523
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
Y CL+DLLGRAG LDEA +I +P + + + L+G+LL+AC ++GN +GE + +
Sbjct: 524 YACLVDLLGRAGHLDEAHNVILNMPIKAD---LALWGSLLAACHLHGNCKLGEIVEKKIL 580
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
++S H LLAN+Y A RW+DV +R +++ G+RK+PG S IEI ++ F+ D
Sbjct: 581 SLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAED 640
Query: 581 PSHSEMKEIYSMLD-------RMAKTLLDSKQNAMEGD 611
SH E + IY LD + AK + ++ N +GD
Sbjct: 641 RSHPESEMIYKELDGLDERVRKAAKYVTETGLNVEDGD 678
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 227/489 (46%), Gaps = 64/489 (13%)
Query: 47 SIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
SI +N LI A + + +L F++++ V +NFT+P + KA L +
Sbjct: 12 SISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK--DVVSWNVSISGH 164
+VH Y+ + GL D + +++D YG G ++FDEMP+ DVVSW IS +
Sbjct: 71 TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130
Query: 165 VKCMRFEDAVDVFRRMR--------QGCNL-MPDEGTVVSTLSACTALKNLELGKEIHR- 214
++A F RMR + C + + G +VS + L G +H
Sbjct: 131 SSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVNCGQLE 272
+ + +GN+++ MY C + A +F+ +P ++V+ W S++SG+ G+ E
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAE 250
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+A F+ D+V E + ++P++ ++ALL CA
Sbjct: 251 RALRTFE-----DMV---------------SEGTSA--------VEPNRVTVIALLKSCA 282
Query: 333 QLGALEQGKWIHGYINENR----ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+LG +E W+H YI+ + D VV TAL++M+A+CG + A EIF + K+
Sbjct: 283 ELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVV 342
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGG------AKPDDITFIGVLSACSHGGLVDEGR 442
W+++I G +AL LF QM+ G KP+ +T + V++ACS G
Sbjct: 343 CWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSA- 401
Query: 443 RFFNTMTEVYQIQPKLEH----YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
+M Y + L+ LID+ + G ++ ++ ++ +E+ +V + +
Sbjct: 402 ----SMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEM-DESTRTVVS-WSS 455
Query: 499 LLSACRIYG 507
++ A I+G
Sbjct: 456 MIGAEGIHG 464
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 311/551 (56%), Gaps = 46/551 (8%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE--VKKGEKVHGYVVKT 117
+ AF+ G ++L+ F ++ + G PD T+ + A+ +G + +G ++H Y +
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
GL + V +++ MYG G++ + + F+E+ K+ V+WN ++ + R +A+++F
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 178 RRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH---RYINQELEFTPIMGNALLDM 233
R M + + PD+ + + AC+ L++LE G+EIH R +EL ++G ALL+M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR---DIVLWT 290
Y K CG LE+AR +FD +R D V W
Sbjct: 181 YSK-------------------------------CGDLEEARKVFD--SIRHDADSVCWN 207
Query: 291 AMINGYVQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
AMI Y Q R +A+ L+R M L P + V ++ CA+L AL+QG+ IH +
Sbjct: 208 AMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRA 267
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
+ +V+ AL+ MY KCG +++AL++F+ ++ KD SW +II A +G ++AL L
Sbjct: 268 TNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLL 327
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
+ +M G KP ++TF+G+LSACSHGGLV +G +F M + ++I+P + H+GC+IDLLG
Sbjct: 328 YQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLG 387
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
R G L EAE +++ +P + N + + +LL AC+ +G++ G + A + S
Sbjct: 388 RGGRLAEAELVLKSMPIQANAV---QWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGG 444
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+ LL+NIYA+A RW+DV +R+ M GV+K PG S IEI ++HEF+ GD SH + +EI
Sbjct: 445 YVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEI 504
Query: 590 YSMLDRMAKTL 600
Y L +M + +
Sbjct: 505 YVELGKMVEEM 515
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 311/562 (55%), Gaps = 46/562 (8%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ ++N LI A+ G +SL FS +R+ + P+ T+P K+ L ++ G++ H
Sbjct: 47 VYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQ 106
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+ G E D +V ++++DMY GK+ N + LFDE+P +++V+W I+G+V+ +
Sbjct: 107 QALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHE 166
Query: 173 AVDVFRRM--------RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP 224
A+ VF+ + D ++S LSAC+ + N + + +H + ++
Sbjct: 167 ALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG-VAIKVGLDK 225
Query: 225 IMG--NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+MG N LLD Y KC G++ +R +FD
Sbjct: 226 VMGVENTLLDAYAKC-------------------------------GEVSLSRKVFDDMA 254
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGK 341
+D+V W +MI Y Q +A +F M + K ++ L LL CA GAL G
Sbjct: 255 EKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGM 314
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H + + + ++AT++I+MY KCG E A F ++EK+ SWT++I G M+G
Sbjct: 315 CLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHG 374
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+AL++F QMI G KP+ ITFI VL+ACSH G ++EG R+FN M+ Y ++P +EHY
Sbjct: 375 FAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHY 434
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++DLLGRAG + EA LI+ + + + L+G+LL+ACRI+ +V++ E A L K
Sbjct: 435 GCMVDLLGRAGYIKEAYNLIKSMKVRRDFV---LWGSLLAACRIHKDVELAEISARELFK 491
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
++ + ++ LLANIYA A RW+DV +R +K+ G+ K PG S +E+ G +H FLVGD
Sbjct: 492 LDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDK 551
Query: 582 SHSEMKEIYSMLDRMAKTLLDS 603
H + ++IY L+ ++ L ++
Sbjct: 552 EHPQHEKIYKYLEELSVKLQEA 573
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 183/417 (43%), Gaps = 49/417 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ Q G + + + L+ + G L A +F I ++ + LI +
Sbjct: 102 KQAHQQALVFGFESDLFVSSALIDM--YSKCGKLSNARVLFDEIPRRNIVTWTSLITGYV 159
Query: 65 KKGSFRKSLLLFSKL---------RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+ ++L++F + E G S D+ V A + E VHG +
Sbjct: 160 QNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAI 219
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K GL+ V N+++D Y G++ +K+FD+M +KDVVSWN I+ + + DA +
Sbjct: 220 KVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFE 279
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMY 234
VF M + +E T+ + L AC L +G +H + I IM +++DMY
Sbjct: 280 VFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMY 339
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
CKCG AR FD M KNV WT+M++GY
Sbjct: 340 CKCGQAEMARNAFDGMKEKNVRSWTAMIAGY----------------------------- 370
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRIT 353
G F R EA+ +F +M +KP+ +++L C+ G LE+G +W + +E +
Sbjct: 371 GMHGFAR--EALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVE 428
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALEL 409
++++ + G I++A + ++ +D W S++ +I+K +EL
Sbjct: 429 PGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAAC----RIHKDVEL 481
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FDR+ D+ W ++I + E++ F M+ + +KP++ + C+ L L
Sbjct: 42 FDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDL 98
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
GK H D V++ALI+MY+KCG + A +F E+ ++ +WTS+I G
Sbjct: 99 NSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGY 158
Query: 398 AMNGKINKALELFSQMI---------SGGAKPDDITFIGVLSACS 433
N ++AL +F + + G D + I VLSACS
Sbjct: 159 VQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACS 203
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/485 (38%), Positives = 276/485 (56%), Gaps = 25/485 (5%)
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
M + WN I G+ + AV+ + M PD T S LSAC ++
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSS-KAEPDGFTHSSLLSACARGGLVKE 59
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H + + + + + +L+ Y G + AR +FD MP ++V+ W SM++GYV
Sbjct: 60 GEQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVR 119
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
C + AR +FD P R++V WT M+ G + + +A+ LF EM+ ++ D+ LVA
Sbjct: 120 CADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAA 179
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVD-----AVVATALIEMYAKCGLIEKALEIFYEL 382
L+ CA+LG L+ G+WIH Y+ + + + + ALI MYA CG++ +A ++F ++
Sbjct: 180 LSACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKM 239
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAK-----PDDITFIGVLSACSHGGL 437
K SWTS+I A G +AL+LF M+S G K PD+ITFIGVL ACSH G
Sbjct: 240 PRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGF 299
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
VDEG + F +M + I P +EHYGC++DLL RAGLLDEA LI +P N+ I +G
Sbjct: 300 VDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAI---WG 356
Query: 498 ALLSACRIYGNVDMGEKLAALL--EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
ALL CRI+ N ++ ++ L E + + + LL+NIYA RW+DV VRQKM E
Sbjct: 357 ALLGGCRIHRNSELASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIE 416
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD-SKQNAMEGDNLV 614
MGV+K PG S I+ING++H F+ GD +H IY +TL D +KQ +EG +
Sbjct: 417 MGVKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIY-------ETLRDVTKQANLEGYDRE 469
Query: 615 AINFL 619
I FL
Sbjct: 470 IIVFL 474
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 187/405 (46%), Gaps = 70/405 (17%)
Query: 48 IQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG 107
+ +P +N +I+ +A+ + K++ ++ + PD FT+ + A G VK+G
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI---------------------------C 140
E+VH V+ G + +V S++ Y G + C
Sbjct: 61 EQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRC 120
Query: 141 ----NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVST 196
+++FD MP ++VVSW ++G + + A+ +F MR+ C + D+ +V+
Sbjct: 121 ADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVEL-DQVALVAA 179
Query: 197 LSACTALKNLELGKEIHRYINQEL------EFTPIMGNALLDMYCKCGCLSEARELFDEM 250
LSAC L +L+LG+ IH Y+ Q + + + NAL+ MY CG L EA ++F +M
Sbjct: 180 LSACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKM 239
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
P K+ + WTSM+ + G ++A DLF T + +G
Sbjct: 240 PRKSTVSWTSMIMAFAKQGLGKEALDLFK----------TMLSDG--------------- 274
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKC 369
+++ ++PD+ + +L C+ G +++G I + I+ ++++ ++
Sbjct: 275 -VKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRA 333
Query: 370 GLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQM 413
GL+++A + + + A W +++ G +I++ EL SQ+
Sbjct: 334 GLLDEARGLIETMPLNPNDAIWGALLGGC----RIHRNSELASQV 374
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 12/236 (5%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + ++++ ++ A+ G R++LLLF ++R V D A
Sbjct: 126 ARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALSACAE 185
Query: 101 LGEVKKGEKVHGY-----VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
LG++K G +H Y V + + + N+++ MY G + ++F +MP K V
Sbjct: 186 LGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTV 245
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGC----NLMPDEGTVVSTLSACTALKNLELGKE 211
SW I K ++A+D+F+ M + PDE T + L AC+ ++ G +
Sbjct: 246 SWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEGHQ 305
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
I + +P + + ++D+ + G L EAR L + MP N N W +++ G
Sbjct: 306 IFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGG 361
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+Q + QQ LN ++ + S G L A ++F + +++ +I AFAK+
Sbjct: 199 VQQRFVARNWQQPSVRLNNALIH-MYASCGILHEAYQVFVKMPRKSTVSWTSMIMAFAKQ 257
Query: 67 GSFRKSLLLFSKL-----RERGVSPDNFTYPFVFKAVGWLGEVKKGEKV-----HGYVVK 116
G +++L LF + + GV PD T+ V A G V +G ++ H + +
Sbjct: 258 GLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGIS 317
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
+E Y C ++D+ G + + L + MP
Sbjct: 318 PSIEH--YGC--MVDLLSRAGLLDEARGLIETMP 347
>gi|356555244|ref|XP_003545944.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 521
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 280/500 (56%), Gaps = 40/500 (8%)
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
L++++ S +++T+ +A K ++H ++VK+G D ++ NS++ Y
Sbjct: 43 LYNQILSHPFSHNHYTFTHALRACYSHHSRSKALEIHAHLVKSGHYLDLFLQNSLLHFYL 102
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLM-PDEGTV 193
+ + LF +P DVVSW +SG K A+ F M ++ P+ T+
Sbjct: 103 AHNDVVSASNLFRSIPSPDVVSWTSLVSGLAKSGFEAQALHHFTNMNAKPKIVRPNAATL 162
Query: 194 VSTLSACTALKNLELGKEIHRYINQELEF--TPIMGNALLDMYCKCGCLSEARELFDEMP 251
V+ L AC++L L LGK H Y + L F I NA+L++Y KC
Sbjct: 163 VAALCACSSLGALGLGKSAHAYGLRMLIFDGNVIFDNAVLELYAKC-------------- 208
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
G L+ A++LFD+ RD+V WT ++ GY + +EA A+F+
Sbjct: 209 -----------------GALKNAQNLFDKVFARDVVSWTTLLMGYARGGYCEEAFAVFKR 251
Query: 312 MQI-IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKC 369
M + +P++ +V +L+ A +GAL G+W+H YI+ + VD + AL+ MY KC
Sbjct: 252 MVLNAEAEPNEATVVTVLSASASIGALSLGQWVHSYIDSRYDLVVDGNIENALLNMYVKC 311
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
G ++ L +F + KDA SW ++ICGLAMNG K LELFS+M+ +PDD+TFIGVL
Sbjct: 312 GDMQMGLRVFDMIVHKDAISWGTVICGLAMNGYEKKTLELFSRMLVEVVEPDDVTFIGVL 371
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
SACSH GLV+EG FF M + Y I P++ HYGC++D+ GRAGLL+EAE +R +P E
Sbjct: 372 SACSHAGLVNEGVMFFKAMRDFYGIVPQMRHYGCMVDMYGRAGLLEEAEAFLRSMPVEAE 431
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
P++GALL AC+I+GN M E + L K +S LL+N+YAS+ RW+D V
Sbjct: 432 G---PIWGALLQACKIHGNEKMSEWIMGHL-KGKSVGVGTLALLSNMYASSERWDDANKV 487
Query: 550 RQKMKEMGVRKVPGCSSIEI 569
R+ M+ ++KV GCS +E+
Sbjct: 488 RKSMRGTRLKKVAGCSWVEL 507
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 202/436 (46%), Gaps = 48/436 (11%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
+I A + + G + N L+ F + +H +++ A +F SI SP ++++ L+ AK
Sbjct: 77 EIHAHLVKSGHYLDLFLQNSLLHF--YLAHNDVVSASNLFRSIPSPDVVSWTSLVSGLAK 134
Query: 66 KGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G ++L F+ + + + V P+ T A LG + G+ H Y ++ L FD
Sbjct: 135 SGFEAQALHHFTNMNAKPKIVRPNAATLVAALCACSSLGALGLGKSAHAYGLRM-LIFDG 193
Query: 124 YVC--NSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
V N+++++Y G + N + LFD++ +DVVSW + G+ + E+A VF+RM
Sbjct: 194 NVIFDNAVLELYAKCGALKNAQNLFDKVFARDVVSWTTLLMGYARGGYCEEAFAVFKRMV 253
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ--ELEFTPIMGNALLDMYCKCGC 239
P+E TVV+ LSA ++ L LG+ +H YI+ +L + NALL+MY KCG
Sbjct: 254 LNAEAEPNEATVVTVLSASASIGALSLGQWVHSYIDSRYDLVVDGNIENALLNMYVKCGD 313
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ +FD + +K+ I W +++ G G +K +LF R
Sbjct: 314 MQMGLRVFDMIVHKDAISWGTVICGLAMNGYEKKTLELFSR------------------- 354
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
M + ++PD + +L+ C+ G + +G + + V +
Sbjct: 355 ------------MLVEVVEPDDVTFIGVLSACSHAGLVNEGVMFFKAMRDFYGIVPQMRH 402
Query: 360 TA-LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+++MY + GL+E+A + E + W +++ ++G E S+ I G
Sbjct: 403 YGCMVDMYGRAGLLEEAEAFLRSMPVEAEGPIWGALLQACKIHGN-----EKMSEWIMGH 457
Query: 418 AKPDDITFIGVLSACS 433
K + +G L+ S
Sbjct: 458 LKGKSVG-VGTLALLS 472
>gi|255569325|ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535066|gb|EEF36748.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 765
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/451 (38%), Positives = 268/451 (59%), Gaps = 4/451 (0%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LK++ A I + GL +P +KL S +L YA K+F I P L +N LI
Sbjct: 44 LKHLKELHATILRSGLFFHPYNASKLFSVAALSSFSSLDYARKVFEEISQPNLYTWNTLI 103
Query: 61 KAFAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+AFA SLL+F + L + P+ FT+PFV KA + + + +HG +K L
Sbjct: 104 RAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVIKAAAGVASLPFSQAIHGMAIKASL 163
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D ++ NS++ Y G + + +F ++ +KDVVSWN I G V + A+++F+
Sbjct: 164 GSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGGCPDKALELFQL 223
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCG 238
M+ N+ P++ T+V LSAC +LE G+ + YI + + + NA+LDMY K G
Sbjct: 224 MK-AENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIERNGINVNLTVSNAMLDMYVKNG 282
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
L +AR LFD+M K++ WT+M+ GY + AR +FD P +DI W +I+ Y Q
Sbjct: 283 SLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNVLISAYEQ 342
Query: 299 FNRFDEAVALFREMQIIRL-KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ EA+A+F E+Q+ + KPD+ LV+ L+ CAQLGA++ G WIH YI + I ++
Sbjct: 343 DGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHVYIKKQDIKLNCH 402
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ T+LI+MY+KCG +EKAL+IFY + +D W+++I GLAM+G+ A++LF +M
Sbjct: 403 LTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMHGRGRAAIDLFFEMQETK 462
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+P+ +TF +L ACSH GLV+EGR FFN M
Sbjct: 463 VRPNAVTFTNLLCACSHTGLVNEGRMFFNQM 493
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 298/512 (58%), Gaps = 19/512 (3%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+K+H +VVK L +++ ++DM G+ LF + D + +N I +
Sbjct: 5 KKIHAHVVKFSLSXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRAYKHN 64
Query: 168 MRFEDAVDVFRRM---RQGCN-LMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT 223
+ A+ V ++M G N PD+ T + C L LGK++H +F
Sbjct: 65 KVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVH---GHAFKFG 121
Query: 224 P----IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
P ++ N+L++MY KC L +A +F+EM ++ + W +++SG+V GQ+ +AR +F+
Sbjct: 122 PKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFE 181
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
+ I WTA+++GY + A+ FR MQ++ ++ D+ LV++L CAQLGALE
Sbjct: 182 ELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALEL 241
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GKWIH Y ++ D V ALIE+YAK G +++ +F+++ E+D SW+++I GLA
Sbjct: 242 GKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGLAN 301
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G+ +A+ELF +M +P+ ITF+G+LSAC+H GL++EG +F +M I+P +E
Sbjct: 302 HGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIEPGVE 361
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HYGCL++LLG +G LD+A ELI+K+P + + I +G L S+CR +GN+++ L
Sbjct: 362 HYGCLVNLLGLSGRLDQALELIKKMPMKPDSDI---WGLLSSSCRSHGNLEIVAIAMEHL 418
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++E D+ + L+N+YA +W+ V+ +R+ M + K PGCSSIE++ ++ E+ G
Sbjct: 419 LELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQEYASG 478
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGD 611
D S K IY +L LL Q+ M+ D
Sbjct: 479 DDSKPFSKAIYRVL-----KLLVMHQSKMDDD 505
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 217/475 (45%), Gaps = 105/475 (22%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LK+I A + + L + + K++ C H HG YA +F + P YN +I
Sbjct: 1 MVELKKIHAHVVKFSLSXSSFLVTKMVDMCNH--HGETEYANLLFKRVADPNAFLYNAMI 58
Query: 61 KAFAKKGSFRKSLLLFSKLR-----ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+A+ + ++ + ++ E PD FT+PFV K L G++VHG+
Sbjct: 59 RAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAF 118
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC--MR---- 169
K G + +T + NS+++MY + + ++F+EM ++D VSWN ISGHV+ MR
Sbjct: 119 KFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARA 178
Query: 170 -FED------------------------AVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
FE+ A++ FRRM Q ++ DE ++VS L AC L
Sbjct: 179 IFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRM-QMVDIELDEISLVSVLPACAQLG 237
Query: 205 NLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
LELGK IH Y ++ I + NAL+++Y K G + E R LF +M ++VI W++M+
Sbjct: 238 ALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIV 297
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G N G R EA+ LF+EMQ +++P+
Sbjct: 298 GLANHG-------------------------------RAREAIELFQEMQKAKVEPNIIT 326
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
V LL+ CA G L +G GY E + IE +E
Sbjct: 327 FVGLLSACAHAGLLNEGL---GY----------------FESMERDDNIEPGVE------ 361
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC-SHGGL 437
+ ++ L ++G++++ALEL +M KPD + + S+C SHG L
Sbjct: 362 -----HYGCLVNLLGLSGRLDQALELIKKM---PMKPDSDIWGLLSSSCRSHGNL 408
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 6/266 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F+ +++ + N L+ H G + A IF +Q + ++ ++ +A+ G
Sbjct: 147 RVFEEMTERDAVSWNTLI--SGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCH 204
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+L F +++ + D + V A LG ++ G+ +H Y K G D VCN++
Sbjct: 205 AVALEFFRRMQMVDIELDEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNAL 264
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+++Y G + ++LF +M ++DV+SW+ I G R +A+++F+ M Q + P+
Sbjct: 265 IEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGLANHGRAREAIELFQEM-QKAKVEPN 323
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELF 247
T V LSAC L G + ++ P + + L+++ G L +A EL
Sbjct: 324 IITFVGLLSACAHAGLLNEGLGYFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELI 383
Query: 248 DEMPNK-NVICWTSMVSGYVNCGQLE 272
+MP K + W + S + G LE
Sbjct: 384 KKMPMKPDSDIWGLLSSSCRSHGNLE 409
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 240/368 (65%), Gaps = 3/368 (0%)
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
A++ + G + A++LFD MP K+++ T+M++ Y G+L+ AR LFD RD V
Sbjct: 98 AIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 157
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W MI+GY Q +EA+ LFR M + KP++ ++++L+ C QLGALE G+W+H YI
Sbjct: 158 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 217
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
N I + V TAL++MY+KCG +E A +F ++ +KD +W S+I G AM+G +AL+
Sbjct: 218 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 277
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF M G P +ITFIG+LSAC H G V EG FN M + Y I+PK+EHYGC+++LL
Sbjct: 278 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 337
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG +++A EL++ + E + + L+G LL ACR++G + +GEK+ LL +S
Sbjct: 338 GRAGHVEQAYELVKNMNIEPDPV---LWGTLLGACRLHGKIALGEKIVELLVDQNLANSG 394
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+ LL+NIYA+ W+ V +R MK+ GV+K PGCSSIE+N +HEFL G +H + KE
Sbjct: 395 TYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKE 454
Query: 589 IYSMLDRM 596
IY ML+ +
Sbjct: 455 IYMMLEEI 462
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 181/406 (44%), Gaps = 76/406 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
++ L QI A +F+ GL +P KL ++ S G L Y+ +FG Q+P + + +I
Sbjct: 43 ISHLLQIHAVLFRHGLDHHPILNFKLQR--SYASLGRLDYSVALFGRTQNPSVFFWTAII 100
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
A +G + LF + E+ +
Sbjct: 101 HGHALRGDVVSAQQLFDTMPEKSLVS---------------------------------- 126
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
+++ Y G++ + LFD M ++D V WNV I G+ + +A+ +FRRM
Sbjct: 127 -----LTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 181
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGC 239
+ P+E TV+S LSAC L LE G+ +H YI N ++F +G AL+DMY KCG
Sbjct: 182 LKA-KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 240
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L +AR +FD++ +K+V+ W SM+ GY ++G+ Q
Sbjct: 241 LEDARLVFDKIDDKDVVAWNSMIVGYA--------------------------MHGFSQ- 273
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVV 358
EA+ LF+ M + L P + +L+ C G + +G I + +E I
Sbjct: 274 ----EALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEH 329
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
++ + + G +E+A E+ + E D W +++ ++GKI
Sbjct: 330 YGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 375
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 19/238 (7%)
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
IH + + + ++ L YA G ++ ++ +F + WT+II G A+ G
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGD 108
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+ A +LF M + ++ +L+ + G +D R F+ M E + +
Sbjct: 109 VVSAQQLFDTM----PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC-----WN 159
Query: 463 CLIDLLGRAGLLDEAEELIR---KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
+ID + G+ +EA L R K + NE+ V ++LSAC G ++ G + + +
Sbjct: 160 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVL---SVLSACGQLGALESGRWVHSYI 216
Query: 520 EKIESK-DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEF 576
E + + T L ++Y+ ED V K+ + + V +S+ + +H F
Sbjct: 217 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD---KDVVAWNSMIVGYAMHGF 271
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 299/554 (53%), Gaps = 36/554 (6%)
Query: 55 AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYV 114
++N+ ++ A + F +S+ L+ + G SPD F++PF+ K+ L G+++H +V
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV--VSWNVSISGHVKCMRFED 172
++ G E + +V +++ MY G + + +K+F+E P V +N ISG+ + D
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 173 AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD 232
A +FRRM++ + D T++ + CT + L LG+ +H G +
Sbjct: 137 AAFMFRRMKE-TGVSVDSVTILGLVPLCTVPEYLWLGRSLH-------------GECV-- 180
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
K G SE V S ++ Y+ CG +E R LFD PV+ ++ W A+
Sbjct: 181 ---KGGTYSE------------VAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAV 225
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I+GY Q + + LF +M+ + PD F LV++L+ CA LGA + G+ + + N
Sbjct: 226 ISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGF 285
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
+ ++ ALI MYA+CG + KA +F + K SWT++I M+G L LF
Sbjct: 286 APNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDD 345
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
MI G +PD F+ VLSACSH GL D+G F M Y+++P EHY CL+DLLGRAG
Sbjct: 346 MIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 405
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
LDEA E I +P E + + +GALL AC+I+ NVDM E A + + E + ++ L
Sbjct: 406 RLDEAMEFIDSMPVEPDGAV---WGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVL 462
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
++NIY+ + E + +R M+E RK PG S +E G +H FL GD SH + +E++ M
Sbjct: 463 MSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRM 522
Query: 593 LDRMAKTLLDSKQN 606
LD + ++++ N
Sbjct: 523 LDELETSVMELAGN 536
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 43/417 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIF--GSIQSPCLLAYNLLIK 61
+Q+ + + G + P L L+ ++C G + A K+F S + YN LI
Sbjct: 70 QQLHCHVIRGGCEAEPFVLTALISMYC---KCGLVEDARKVFEENPHSSQLGVCYNALIS 126
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + +F +++E GVS D+ T + + G +HG VK G
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS 186
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ V NS + MY G + + ++LFDEMP K +++WN ISG+ + D +++F +M+
Sbjct: 187 EVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK 246
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGC 239
+ PD T+VS LS+C L ++G+E+ + F P + NAL+ MY +CG
Sbjct: 247 SS-GVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEAN-GFAPNVFLSNALISMYARCGN 304
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L++AR +FD MP K+++ WT+M+ Y G E LFD R I
Sbjct: 305 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGI------------- 351
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
+PD + V +L+ C+ G ++G + E ++
Sbjct: 352 ------------------RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 393
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMI 414
+ L+++ + G +++A+E + E D A W +++ ++ ++ A F+++I
Sbjct: 394 YSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI 450
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/597 (32%), Positives = 318/597 (53%), Gaps = 37/597 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI + + GL Q N L+ + G++ A +FG + L+++N +I
Sbjct: 955 KQIHGIVMRSGLDQVVSVGNCLINM--YVKAGSVSRARSVFGQMNEVDLISWNTMISGCT 1012
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL-GEVKKGEKVHGYVVKTGLEFDT 123
G S+ +F L + PD FT V +A L G ++H +K G+ D+
Sbjct: 1013 LSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDS 1072
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V +++D+Y GK+ + LF D+ SWN + G++ F A+ ++ M++
Sbjct: 1073 FVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQES 1132
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEA 243
D+ T+V+ A L L+ GK+IH + + LD++ G L
Sbjct: 1133 GE-RSDQITLVNAAKAAGGLVGLKQGKQIHAVV--------VKRGFNLDLFVTSGVLDM- 1182
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
Y+ CG++E AR +F P D V WT MI+G V+ + +
Sbjct: 1183 ---------------------YLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEE 1221
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ + +M++ +++PD++ L+ C+ L ALEQG+ IH I + D V T+L+
Sbjct: 1222 HALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLV 1281
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MYAKCG IE A +F + ASW ++I GLA +G +AL+ F M S G PD +
Sbjct: 1282 DMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRV 1341
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFIGVLSACSH GLV E F +M + Y I+P++EHY CL+D L RAG ++EAE++I
Sbjct: 1342 TFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISS 1401
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P E + +Y LL+ACR+ + + G+++A L +E DS+ + LL+N+YA+AN+W
Sbjct: 1402 MPFEAS---ASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQW 1458
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
E+V + R M+++ V+K PG S +++ +H F+ GD SH E IY+ ++ + K +
Sbjct: 1459 ENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRI 1515
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 223/472 (47%), Gaps = 38/472 (8%)
Query: 40 YAEKIF-GSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
YA K+F ++ +N + F ++G +++ F + V+ D T+ + V
Sbjct: 886 YATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVV 945
Query: 99 GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
L ++ G+++HG V+++GL+ V N +++MY G + + +F +M + D++SWN
Sbjct: 946 AGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWN 1005
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
ISG E +V +F + + +L+PD+ TV S L AC++L E Y+
Sbjct: 1006 TMISGCTLSGLEECSVGMFVHLLRD-SLLPDQFTVASVLRACSSL-------EGGYYLAT 1057
Query: 219 ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
++ + +LD + T+++ Y G++E+A LF
Sbjct: 1058 QIHACAMKAGVVLDSFVS----------------------TALIDVYSKRGKMEEAEFLF 1095
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE 338
D+ W A+++GY+ F +A+ L+ MQ + D+ LV L L+
Sbjct: 1096 VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLK 1155
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
QGK IH + + +D V + +++MY KCG +E A +F E+ D +WT++I G
Sbjct: 1156 QGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCV 1215
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY-QIQPK 457
NG+ AL + QM +PD+ TF ++ ACS +++GR+ + ++ P
Sbjct: 1216 ENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPF 1275
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
+ L+D+ + G +++A L ++ N + + A++ +GN
Sbjct: 1276 V--MTSLVDMYAKCGNIEDARGLFKR----TNTRRIASWNAMIVGLAQHGNA 1321
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 151/594 (25%), Positives = 250/594 (42%), Gaps = 88/594 (14%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC--LLAYNLLIKA 62
K+ A+I G + N L+ + G+L A K+F + L+ +N ++ A
Sbjct: 676 KRAHARILTSGHHPDRFVTNNLITM--YAKCGSLSSARKLFDTTPDTNRDLVTWNAILSA 733
Query: 63 FAKKGS-FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
A LF LR VS T VFK E +HGY VK GL++
Sbjct: 734 LAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQW 793
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV-KCMRFEDAVDVFRRM 180
D +V +++++Y G I + LFD M +DVV WNV + +V C+ +E +
Sbjct: 794 DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP-----IMGNALLDMYC 235
R G PD+ T+ + KN+ K+ Y + + I+ N L +
Sbjct: 854 RTG--FRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFL 911
Query: 236 KCGCLSEARELFDEMPNKNVIC-------WTSMVSG------------------------ 264
+ G EA + F +M N V C ++V+G
Sbjct: 912 QRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVS 971
Query: 265 --------YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
YV G + +AR +F + D++ W MI+G + +V +F +
Sbjct: 972 VGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDS 1031
Query: 317 LKPDKFILVALLTGCAQL-GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
L PD+F + ++L C+ L G IH + + +D+ V+TALI++Y+K G +E+A
Sbjct: 1032 LLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEA 1091
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F D ASW +I+ G ++G KAL L+ M G + D IT + A G
Sbjct: 1092 EFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAA--G 1149
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD---------EAEELIRKIPN 486
GLV + + QI + G +DL +G+LD A + +IP+
Sbjct: 1150 GLVG--------LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPS 1201
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAAL-------LEKIESKDSSFHTLL 533
++ + ++S C V+ G++ AL L K++ + +F TL+
Sbjct: 1202 PDD----VAWTTMISGC-----VENGQEEHALFTYHQMRLSKVQPDEYTFATLV 1246
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 56/426 (13%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD--KDVVSWNVSISG- 163
G++ H ++ +G D +V N+++ MY G + + +KLFD PD +D+V+WN +S
Sbjct: 675 GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEF 222
+ D +FR +R+ + T+ C + + +H Y + L++
Sbjct: 735 AAHADKSHDGFHLFRLLRRSV-VSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQW 793
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN-CGQLE--------- 272
+ AL+++Y K G + EAR LFD M ++V+ W M+ YV+ C + E
Sbjct: 794 DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853
Query: 273 ----KARDLFDRSPVR-----------------------------DIVLWTAMINGYVQF 299
+ D+ R+ R D+++W ++ ++Q
Sbjct: 854 RTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQR 913
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
EAV F +M R+ D V +LT A L LE GK IHG + + + V
Sbjct: 914 GEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVG 973
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
LI MY K G + +A +F ++ E D SW ++I G ++G ++ +F ++
Sbjct: 974 NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLL 1033
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK--LEHY--GCLIDLLGRAGLLD 475
PD T VL ACS EG + T ++ L+ + LID+ + G ++
Sbjct: 1034 PDQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKME 1089
Query: 476 EAEELI 481
EAE L
Sbjct: 1090 EAEFLF 1095
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/503 (35%), Positives = 298/503 (59%), Gaps = 18/503 (3%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
+K ++ H +++ TGL D ++ G + +F P + N I
Sbjct: 28 LKTLKQSHCFMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPFPNTYLHNTMI-- 85
Query: 164 HVKCMRFED-------AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RY 215
+ + D A+ V+R+ C PD T L + ++ G+++H +
Sbjct: 86 --RALSLVDERNAHSIAITVYRKFWAFC-AKPDTFTFPFVLKIVVRVSDVWFGRQVHGQA 142
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ + + + L+ MY CG L +AR++FDEM ++V W ++++GY G++++AR
Sbjct: 143 VVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEAR 202
Query: 276 DLFDRSP--VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
L + P VR+ V WT +I+GY + R EA+ +F+ M + + PD+ L+A+L+ CA
Sbjct: 203 GLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACAD 262
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
LG+LE G+ I Y++ + + A+I+MYAK G I KALE+F + E++ +WT+I
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTI 322
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I GLA +G +AL +F +M+ G KP+D+TFI +LSACSH G VD G RFFN+M Y
Sbjct: 323 ITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYG 382
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I P +EHYGC+IDLLGRAG L EAEE+I+ +P E+N I +G+LL+A ++ ++D+GE
Sbjct: 383 INPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAI---WGSLLAASNVHHDIDVGE 439
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
+ L K+E +S + LLAN+Y++ RW++ +R+ MK +GV+K+ G SSIE+ +
Sbjct: 440 RALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIEVENRV 499
Query: 574 HEFLVGDPSHSEMKEIYSMLDRM 596
++F+ GD SH ++++I+ +L M
Sbjct: 500 YKFISGDLSHPQVEKIHELLQEM 522
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 209/453 (46%), Gaps = 73/453 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQ + GL ++ + K + C++ H L YA +F P +N +I
Sbjct: 28 LKTLKQSHCFMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPFPNTYLHNTMI 85
Query: 61 KAFA---KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+A + ++ + ++ ++ K PD FT+PFV K V + +V G +VHG V
Sbjct: 86 RALSLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVF 145
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV----------------------- 154
G + +V ++ MY G + + +K+FDEM +DV
Sbjct: 146 GFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARGLL 205
Query: 155 ----------VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
VSW ISG+ + R +A++VF+RM N+ PDE T+++ LSAC L
Sbjct: 206 EMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLME-NVDPDEVTLLAVLSACADLG 264
Query: 205 NLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+LELG+ I Y++ + + NA++DMY K G +++A E+F+ + +NV+ WT++++
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIIT 324
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G G +A +FDR M+ V KP+
Sbjct: 325 GLATHGHGAEALVMFDR-----------MVKAGV--------------------KPNDVT 353
Query: 324 LVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
+A+L+ C+ +G ++ G ++ + ++ I + +I++ + G + +A E+ +
Sbjct: 354 FIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSM 413
Query: 383 R-EKDAASWTSIICGLAMNGKINKALELFSQMI 414
E +AA W S++ ++ I+ Q+I
Sbjct: 414 PFESNAAIWGSLLAASNVHHDIDVGERALYQLI 446
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 135/282 (47%), Gaps = 19/282 (6%)
Query: 51 PCLL----AYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK 106
PC + ++ +I +A+ G +++ +F ++ V PD T V A LG ++
Sbjct: 209 PCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLEL 268
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
GE++ YV G+ + N+++DMY G I ++F+ + +++VV+W I+G
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLAT 328
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM 226
+A+ +F RM + + P++ T ++ LSAC+ + ++LG + + P +
Sbjct: 329 HGHGAEALVMFDRMVK-AGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNI 387
Query: 227 GN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ ++D+ + G L EA E+ MP N W S+++ + D+ +R+
Sbjct: 388 EHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLA----ASNVHHDIDVGERALY 443
Query: 284 RDIVL-------WTAMINGYVQFNRFDEAVALFREMQIIRLK 318
+ I L + + N Y R+DE+ + + M+ I +K
Sbjct: 444 QLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVK 485
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 279/455 (61%), Gaps = 6/455 (1%)
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP +D ++W ++ + + VF + L PD+ + + AC L +++L
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKL 60
Query: 209 GKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
GK++H +I E ++ ++L+DMY KC L A+ +FD + KN I WT+MVSGY
Sbjct: 61 GKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAK 120
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP-DKFILVA 326
G+ E+A +LF R PV+++ WTA+I+G+VQ + EA ++F EM+ R+ D +L +
Sbjct: 121 SGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 180
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
++ CA L A G+ +HG + ++ ALI+MYAKC + A +IF +R +D
Sbjct: 181 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 240
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
SWTS+I G+A +G+ KAL L+ +M+S G KP+++TF+G++ ACSH G V +GR F
Sbjct: 241 VVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQ 300
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
+MT+ Y I+P L+HY CL+DLLGR+GLLDEAE LI +P +E P + ALLSAC+
Sbjct: 301 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE---PTWAALLSACKRQ 357
Query: 507 GNVDMGEKLA-ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
G MG ++A L+ + KD S + LL+NIYASA+ W V+ R+K+ +M VRK PG S
Sbjct: 358 GQGQMGVRIADHLVSSFKPKDPSTYILLSNIYASASLWGKVSEARRKLGDMEVRKDPGYS 417
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
S+E+ F G+ SH+ ++I+ +L ++ + +
Sbjct: 418 SVEVRKETEVFYAGETSHALKEDIFRLLKKLEEEM 452
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 173/400 (43%), Gaps = 68/400 (17%)
Query: 86 PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG----------- 134
PD+F + + KA LG +K G++VH + + + D V +S++DMY
Sbjct: 40 PDDFVFSALVKACANLGSIKLGKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAV 99
Query: 135 ---------------VLGKICNVKK-----LFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
V G + +K LF +P K++ SW ISG V+ + +A
Sbjct: 100 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAF 159
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDM 233
VF MR+ + D + S + AC L G+++H I + + NAL+DM
Sbjct: 160 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 219
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KC + A+++F M +++V+ WTS++ G GQ EK
Sbjct: 220 YAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEK-------------------- 259
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR-I 352
A+AL+ EM +KP++ V L+ C+ +G + +G+ + + ++ I
Sbjct: 260 -----------ALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQSMTKDYGI 308
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFS 411
T L+++ + GL+++A + + + D +W +++ G+ + +
Sbjct: 309 RPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIAD 368
Query: 412 QMISGGAKPDDITFI---GVLSACSHGGLVDEGRRFFNTM 448
++S D T+I + ++ S G V E RR M
Sbjct: 369 HLVSSFKPKDPSTYILLSNIYASASLWGKVSEARRKLGDM 408
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLR-ERGVSPDNFTYPFVFKAVG 99
A ++F + L ++ LI F + G ++ +F+++R ER D + A
Sbjct: 127 ALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 186
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L G +VHG V+ G + ++ N+++DMY + K +F M +DVVSW
Sbjct: 187 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 246
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
I G + + E A+ ++ M + P+E T V + AC+ + + G+E+ + + ++
Sbjct: 247 LIVGMAQHGQAEKALALYDEMVSH-GVKPNEVTFVGLIYACSHVGFVAKGRELFQSMTKD 305
Query: 220 LEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQ 270
P + + LLD+ + G L EA L MP + W +++S GQ
Sbjct: 306 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQ 359
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
+++ A+ IF ++ ++++ LI A+ G K+L L+ ++ GV P+ T+ +
Sbjct: 225 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIY 284
Query: 97 AVGWLGEVKKGEKV-----HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP- 150
A +G V KG ++ Y ++ L+ Y C ++D+ G G + + L MP
Sbjct: 285 ACSHVGFVAKGRELFQSMTKDYGIRPSLQH--YTC--LLDLLGRSGLLDEAENLIHTMPF 340
Query: 151 DKDVVSWNVSISG 163
D +W +S
Sbjct: 341 PPDEPTWAALLSA 353
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/561 (33%), Positives = 304/561 (54%), Gaps = 44/561 (7%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F ++N+++ K + L F K+R V PDNFTY +
Sbjct: 100 AIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC-- 157
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
++ G++VH +VK + D ++ +++ MY +G+I + +K+FD MP + +V+WN
Sbjct: 158 --DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAM 215
Query: 161 ISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
IS + K R + ++ +FR++ R+G + DE T L+ A + ++H I +
Sbjct: 216 ISCYSKYGRGDKSIGLFRQLXREG--ISADEYTYAIVLNEFAARWQVFEAMQVHSLIIER 273
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+C D N ++V+ Y CG + A LF+
Sbjct: 274 -------------GFCS-----------DRFTN------NALVNLYSKCGYVASASRLFE 303
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P +D+V WT +I G++Q +EA+ LF +MQ+ ++P+ F LL CA A ++
Sbjct: 304 EIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQK 363
Query: 340 GKWIHGYINE-NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
G+ HG + + + D VV +A+++MY+KCG + AL F E+ E+D ASW IICG A
Sbjct: 364 GRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYA 423
Query: 399 MNGKINKALELFSQMI---SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
NG KAL+L+++M+ G P+++TF+GVL ACSH GL+ EG +F M + + I+
Sbjct: 424 QNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIK 483
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P EHY C++DLLGRAGLL EAE LI +P + + + ++GALL AC+++G+V M +
Sbjct: 484 PTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNV---MWGALLGACKLHGDVQMTRRT 540
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A L E ++SS + LLAN Y W + +R+ M+ GV K GCS +EI +H
Sbjct: 541 AEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHS 600
Query: 576 FLVGDPSHSEMKEIYSMLDRM 596
FL GD H +++ +L R+
Sbjct: 601 FLAGDXLHPQIEVASQVLPRL 621
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 182/394 (46%), Gaps = 18/394 (4%)
Query: 102 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
G + K +H +VK GL Y CN ++ Y + + KL MP VVS+N +
Sbjct: 29 GHMYKAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTIL 88
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
SG+ K +A+ +F + D + LS C +KN +LG+ + ++
Sbjct: 89 SGYFKFGLVSEAIKLFDGTSK-----RDCHSWNIVLSGC--VKNHKLGEGLTHFMKMRCS 141
Query: 222 ------FTPIMGNALLDMYCKCGCLSEAR-ELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
FT A++ C G + ++ + + T+++ Y G++ A
Sbjct: 142 SVRPDNFT----YAIIIPCCDLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDA 197
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
R +FD P R +V W AMI+ Y ++ R D+++ LFR++ + D++ +L A
Sbjct: 198 RKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAAR 257
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
+ + +H I E D AL+ +Y+KCG + A +F E+ ++D SWT II
Sbjct: 258 WQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVII 317
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
G +G + +A+ LF QM G +P+ TF G+L AC+ +GR F + + +
Sbjct: 318 VGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLL 377
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ ++D+ + G + +A +++P +
Sbjct: 378 GADVVVGSAVVDMYSKCGEMGDALRAFQEMPERD 411
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/609 (33%), Positives = 328/609 (53%), Gaps = 81/609 (13%)
Query: 1 MTQLKQIQAQIFQIG-LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS--------IQSP 51
+T LK I + + G L P L +L++ + G+L A +F Q+P
Sbjct: 38 LTTLKLIHSSLSTRGFLLHTPHFLARLIIL--YSKLGDLHSARTLFDHRHHHHHGHTQAP 95
Query: 52 CLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA-VGWLGEVKKGEKV 110
N +++A+A G +++ L+ ++ GV +NFTYPFV K LG V GE V
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVF-GEVV 154
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
HG VV+TG D +V +++DMY G+I + ++FD M +DVV W I+ + + R
Sbjct: 155 HGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERP 214
Query: 171 EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNAL 230
A+ +FR+M++ + DE T +S SA L + +
Sbjct: 215 LKALMLFRKMQEE-GFLGDEITAISVASAVGQLGDGRMA--------------------- 252
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+S AR +FD M +N I W SM+SGY G
Sbjct: 253 ---------ISRARLVFDRMEERNGISWNSMLSGYTQNG--------------------- 282
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
R +A++LF +MQ P+ + +++ C+ LG+ G+ +H ++ +
Sbjct: 283 ----------RPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISS 332
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFY--ELREKDAASWTSIICGLAMNGKINKALE 408
++ +D + A+++MY KCG ++ A+E+F EL E+D +SW +I G ++G +ALE
Sbjct: 333 KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALE 392
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LFS+M G +P+DITF +LSACSH GL+DEGR+ F MT++ ++P+++HY C++D+L
Sbjct: 393 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDML 451
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG L+EA LI+KIP+ ++ ++GALL ACRI+GN ++GE A L ++E + +
Sbjct: 452 GRAGFLNEAFRLIKKIPSRPSD---EVWGALLLACRIHGNTELGEIAANNLFQLEPEHTG 508
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
++ L++NIYA++N+W++V VRQ MK G++K S IE +H F D S +E
Sbjct: 509 YYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 568
Query: 589 IYSMLDRMA 597
+Y ++ +A
Sbjct: 569 VYRKVESLA 577
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 306/563 (54%), Gaps = 38/563 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GNL+ A + F + + N ++ + G +++ LF + GV D + VF
Sbjct: 301 GNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVF 360
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A + +G +VH VK+G + D V N+I+D+YG + +F EM +D V
Sbjct: 361 SACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSV 420
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIH- 213
SWN I+ + +ED + M R G + PD+ T S L AC L++LE G +H
Sbjct: 421 SWNAIIAALEQNECYEDTIAHLNEMLRSG--MEPDDFTYGSVLKACAGLQSLEYGLVVHG 478
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
+ I L + + ++DMYCKC G + +
Sbjct: 479 KAIKSGLGLDAFVSSTVVDMYCKC-------------------------------GAITE 507
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
A+ L DR +++V W ++I+G+ + +EA F EM + +KPD F +L CA
Sbjct: 508 AQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCAN 567
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
L +E GK IHG I + + D +++ L++MYAKCG + +L +F + R+ D SW ++
Sbjct: 568 LATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAM 627
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
ICG A++G+ +ALE+F +M P+ TF+ VL ACSH GL+D+G ++F+ MT Y+
Sbjct: 628 ICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYK 687
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
+ P+LEH+ C++D+LGR+ EA E IR +P E + ++ + LLS C+I +V++ E
Sbjct: 688 LVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVV---WKTLLSICKIRQDVEVAE 744
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
A+ + +++ D+S + LL+N+YA + +W DV+ R+ M++ +RK PGCS IE+ +
Sbjct: 745 TAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEM 804
Query: 574 HEFLVGDPSHSEMKEIYSMLDRM 596
H FLVGD H KE+Y ML+ +
Sbjct: 805 HGFLVGDKVHPRSKEVYEMLNSL 827
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 142/629 (22%), Positives = 267/629 (42%), Gaps = 94/629 (14%)
Query: 11 IFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFR 70
+F ++ + N ++ H G+ A +FG++ P ++++N LI + + G FR
Sbjct: 76 VFDTMPHRDTVSWNTMLTAYVHA--GDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFR 133
Query: 71 KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
S+ L ++ RGV+ D T + K+ G L ++ G ++H VKTGLE D ++++
Sbjct: 134 NSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALV 193
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
DMYG + + + F M +++ VSW +I+G V+ ++ +++F +M Q L +
Sbjct: 194 DMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQM-QRLGLGVSQ 252
Query: 191 GTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
S +C A+ L +++H + I ++G A++D+
Sbjct: 253 PAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDV---------------- 296
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
Y G L AR F P ++ AM+ G V+ EA+ LF
Sbjct: 297 ---------------YAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLF 341
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
+ M + D L + + CA++ QG +H ++ VD V A++++Y KC
Sbjct: 342 QFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKC 401
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
+ +A +F E+ ++D+ SW +II L N + ++M+ G +PDD T+ VL
Sbjct: 402 KALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVL 461
Query: 430 SACS-----HGGLVDEGRRFFNTMTEVYQIQPKLEHY--GCLIDLLGRAGLLDEAEELIR 482
AC+ GLV G+ + + L+ + ++D+ + G + EA++L
Sbjct: 462 KACAGLQSLEYGLVVHGKAIKSGL--------GLDAFVSSTVVDMYCKCGAITEAQKLHD 513
Query: 483 KIPNEN----NEIIVPL---------------------------YGALLSACRIYGNVDM 511
+I + N II Y +L C +++
Sbjct: 514 RIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIEL 573
Query: 512 GEKLAALLEKIES-KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
G+++ + K E D + L ++YA D + +K +++ + N
Sbjct: 574 GKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDF--------VSWN 625
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRMAKT 599
+I G H + E M +RM +
Sbjct: 626 AMI----CGYALHGQGLEALEMFERMQRA 650
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 197 LSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L A L G+ H R + T + N LL MY +CG + A +FD MP+++
Sbjct: 26 LCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDT 85
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
+ W +M++ YV+ G + A LF P D+V W +I+GY Q F +V L EM
Sbjct: 86 VSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRR 145
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
+ D+ L LL C L L G IH + + D +AL++MY KC ++ A
Sbjct: 146 GVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDA 205
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
L F+ + E+++ SW + I G N + + +ELF QM G + +C+
Sbjct: 206 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAM 265
Query: 436 GLVDEGRRFF-NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
+ R+ + + V+ + ++D+ +AG L +A +P+ N E
Sbjct: 266 PCLSTARQLHAHAIKNVFSSDRVVG--TAIVDVYAKAGNLVDARRAFIGLPHHNVE 319
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 155/383 (40%), Gaps = 66/383 (17%)
Query: 84 VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK 143
V+ F++ + A + G+ H ++ +G T+V N ++ MY G +
Sbjct: 15 VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM----------------------- 180
+FD MP +D VSWN ++ +V + A +F M
Sbjct: 75 GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134
Query: 181 ---------RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNAL 230
R+G L D T+ L +C L +L LG +IH + LE G+AL
Sbjct: 135 SVGLSMEMSRRGVAL--DRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSAL 192
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+DMY KC L +A F M +N + W
Sbjct: 193 VDMYGKCRSLDDALRFFHGMGERNSVSW-------------------------------G 221
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
A I G VQ ++ + LF +MQ + L + + CA + L + +H + +N
Sbjct: 222 AAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKN 281
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ D VV TA++++YAK G + A F L + + +++ GL G +A++LF
Sbjct: 282 VFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLF 341
Query: 411 SQMISGGAKPDDITFIGVLSACS 433
M G D I+ GV SAC+
Sbjct: 342 QFMTRSGVGFDVISLSGVFSACA 364
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/595 (32%), Positives = 317/595 (53%), Gaps = 36/595 (6%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ G AEK+F + L++YN ++ + + G ++ F ++ ER V N
Sbjct: 152 YAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMV 211
Query: 92 P-FVFK-----------------AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
FV AV W+ + G HG +V+ FD C +++
Sbjct: 212 AGFVNNCDLGSAWELFEKIPDPNAVSWVTMLC-GFARHGKIVEARKLFDRMPCKNVVSWN 270
Query: 134 GVLG------KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLM 187
++ +I KLF E P KD VSW I+G+V+ + ++A +V+ N M
Sbjct: 271 AMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVY-------NQM 323
Query: 188 PDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELF 247
P + T ++N + E + +Q + I N+++ YC+ G +SEA LF
Sbjct: 324 PYKDVAAKTALMSGLIQNGRI-DEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLF 382
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
+MP KN + W +M+SGY G++++A ++F+ VR+++ W ++I G++Q + +A+
Sbjct: 383 RQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALK 442
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
M KPD+ L+ CA L AL+ GK +H I ++ D V+ ALI MYA
Sbjct: 443 SLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYA 502
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG ++ A ++F ++ D SW S+I G A+NG N+A F QM S G PD++TFIG
Sbjct: 503 KCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIG 562
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
+LSACSH GL ++G F M E + I+P EHY CL+DLLGR G L+EA ++R + +
Sbjct: 563 MLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVK 622
Query: 488 NNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVT 547
N L+G+LL+ACR++ N+++G+ A L ++E ++S + L+N++A A RWEDV
Sbjct: 623 AN---AGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVE 679
Query: 548 NVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
+R M+E K+PGCS IE+ I F+ DP + I +L+ ++ + D
Sbjct: 680 RLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMRD 734
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 235/527 (44%), Gaps = 78/527 (14%)
Query: 16 LQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLL 75
L+Q+ N+ G + A+++F ++ YN ++ FAK G + L
Sbjct: 11 LEQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQL 70
Query: 76 FSKLRERGV---------------------------SPDNFTYPFVFKAVGWLGEVKKGE 108
F K+ +R + DNF++ + G ++K
Sbjct: 71 FDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKAR 130
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
++ V + DT N+++ Y G+ + +K+F++MP KD+VS+N ++G+ +
Sbjct: 131 ELFELVPD---KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNG 187
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN 228
+ A+ F R M + V L + N +LG + + + +
Sbjct: 188 KMGLAMKFFER-------MAERNVVSWNLMVAGFVNNCDLGSAWELF-EKIPDPNAVSWV 239
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
+L + + G + EAR+LFD MP KNV+ W +M++ YV Q+++A LF +P +D V
Sbjct: 240 TMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVS 299
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
WT MINGYV+ + DEA ++ +M D AL++G Q G +++ + +N
Sbjct: 300 WTTMINGYVRVGKLDEAREVYNQMPY----KDVAAKTALMSGLIQNGRIDEASQVFSQLN 355
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ DA+ ++I Y + G + +AL +F ++ K+A SW ++I G A G++++A E
Sbjct: 356 KR----DAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATE 411
Query: 409 LFSQM-----------ISG--------------------GAKPDDITFIGVLSACSHGGL 437
+F M I+G G KPD TF LS+C++
Sbjct: 412 IFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAA 471
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
+ G++ + + I L LI + + G + AE++ + I
Sbjct: 472 LQVGKQLHELILKSGYIN-DLFVSNALIAMYAKCGGVQSAEKVFKDI 517
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 196/392 (50%), Gaps = 30/392 (7%)
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
+G G++ + ++V V+ TY NS++ ++ G++ + ++LFD+M +++VSW
Sbjct: 27 LGKQGKIDEAKRVFSNVIHK--NHATY--NSMVTVFAKNGRVSDARQLFDKMSQRNLVSW 82
Query: 158 NVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN 217
N I+G++ E+A +F M + D + ++ T LE +E+ +
Sbjct: 83 NTMIAGYLHNNMVEEAHKLFDLMAE-----RDNFSWALMITCYTRKGMLEKARELFELVP 137
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+L+ NA++ Y K G +A ++F++MP K+++ + SM++GY G++ A
Sbjct: 138 DKLD--TACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKF 195
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
F+R R++V W M+ G+V A LF ++ P+ V +L G A+ G +
Sbjct: 196 FERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIP----DPNAVSWVTMLCGFARHGKI 251
Query: 338 EQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 396
+ + + +R+ VV+ A+I Y + I++A+++F E KD SWT++I G
Sbjct: 252 VEARKLF-----DRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMING 306
Query: 397 LAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQP 456
GK+++A E+++QM D ++S G +DE + F+ + + I
Sbjct: 307 YVRVGKLDEAREVYNQM----PYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAI-- 360
Query: 457 KLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ +I ++G + EA L R++P +N
Sbjct: 361 ---CWNSMIAGYCQSGRMSEALNLFRQMPVKN 389
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 167/362 (46%), Gaps = 36/362 (9%)
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G + EA+ +F + +KN + SMV+ + G++ AR LFD+ R++V W MI G
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAG 88
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Y+ N +EA LF M + D F ++T + G LE+ + + + + +D
Sbjct: 89 YLHNNMVEEAHKLFDLMA----ERDNFSWALMITCYTRKGMLEKARELFELVPDK---LD 141
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
A+I YAK G + A ++F ++ KD S+ S++ G NGK+ A++ F +M
Sbjct: 142 TACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAE 201
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG--RAGL 473
++ G ++ C G + E+++ P + L G R G
Sbjct: 202 RNVVSWNLMVAGFVNNCDLG-----------SAWELFEKIPDPNAVSWVTMLCGFARHGK 250
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
+ EA +L ++P +N V + A+++A +D K L ++ KD T +
Sbjct: 251 IVEARKLFDRMPCKN----VVSWNAMIAAYVQDLQIDEAVK---LFKETPYKDCVSWTTM 303
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
N Y + ++ R+ +M + V +++ ++G+I + + S +++S L
Sbjct: 304 INGYVRVGKLDE---AREVYNQMPYKDVAAKTAL-MSGLIQNGRIDEAS-----QVFSQL 354
Query: 594 DR 595
++
Sbjct: 355 NK 356
>gi|147828480|emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
Length = 841
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 311/558 (55%), Gaps = 18/558 (3%)
Query: 3 QLKQIQAQIFQIGLQQ-NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q KQ+ A I GL P ++++ ++ S Y + +SP ++ I+
Sbjct: 15 QAKQVHALILIHGLSHLEPILARQILJSASNYSATVAQYVHSVLHHSKSPDSFSWACAIR 74
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ G F+++ L+ +++ G+ P F KA + G +HG V K G
Sbjct: 75 FSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFGFSG 134
Query: 122 D---TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
YV +++D Y LG + +K+FDEM +++VVSWN ++G++K A VF
Sbjct: 135 GGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFD 194
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCG 238
+ Q D + S +S ++E + Q E NA++ Y + G
Sbjct: 195 EIPQ-----KDVISWNSMISGYARAGDMEKALSL---FQQMPERNFASWNAMISGYVEFG 246
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ AR FD MP N + W +M+SGY CG ++ A +LFD+ +D++L+ AMI Y Q
Sbjct: 247 DIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQ 306
Query: 299 FNRFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+R EA+ LF M + ++PD+ L ++++ C+QLG L G WI Y+ I +D
Sbjct: 307 NSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDG 366
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ATAL+++YAKCG I+KA E+F+ LR+KD ++T++I G +NGK A++LF +M+
Sbjct: 367 HLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDA 426
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
P+ ITFIG+L+A +H GLV+EG R F +M + Y + P ++HYG ++DLLGRAG L E
Sbjct: 427 QIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLLGRAGRLQE 485
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A ELI+ +P + + + +GALL ACR++ NV+ GE A ++E + + +LL+NI
Sbjct: 486 ALELIKSMPMQPHAGV---WGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYXSLLSNI 542
Query: 537 YASANRWEDVTNVRQKMK 554
YAS RW+DV +R+ K
Sbjct: 543 YASGERWDDVKRLRKSPK 560
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 316/570 (55%), Gaps = 30/570 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G ++ A K+F ++ ++ + L+ + + ++ +F + E G P NFT
Sbjct: 29 GVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIAL 88
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A L + G++ H +++K + D+ + N++ +Y G + + K F E +KDV+
Sbjct: 89 NACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVI 148
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW IS R + +F M N+ P++ T+ S LS C+ +++ +LG ++H
Sbjct: 149 SWTTIISACGDNGRAGMGLRLFIEMLFE-NVEPNDFTLTSVLSLCSTIQSSDLGMQVHS- 206
Query: 216 INQEL--EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
++ +L E + N+L+ +Y KCGC+ EA+ LF+ M KN+I W +M++G+ L
Sbjct: 207 LSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDL-- 264
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
A+D F T + Y++ NR KPD F L ++LT C++
Sbjct: 265 AKDNFSAQQT-----GTEALGMYLKLNRSGR-------------KPDLFTLSSILTVCSR 306
Query: 334 LGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSI 393
L ALEQG+ IH ++ D VV TAL++MY KCG IE+A + F ++ + SWTS+
Sbjct: 307 LAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSM 366
Query: 394 ICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
I A +G+ AL+LF M G +P+ ITF+GVL+ACSH G+VDE +F M + Y+
Sbjct: 367 ITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYK 426
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
I+P ++HYGCL+D+ R G LDEA ++I+++ E NE I L L++ CR +GN ++G
Sbjct: 427 IKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLL---LIAGCRNHGNEELGF 483
Query: 514 KLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
A L K++ + + + +L N+Y SA RWEDV+ VR+ MKE V K+ S I I G +
Sbjct: 484 YAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEV 543
Query: 574 HEFLVGDPSHSEMKEIYSMLDRM---AKTL 600
H F + H+ E++++L+ + AK+L
Sbjct: 544 HSFKTNNRLHNHNAELHTLLNDLVDRAKSL 573
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 181/378 (47%), Gaps = 54/378 (14%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
VH +V+KTG + +V + ++++Y G + N +K+FD +P ++VV W ++G+V+ +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGN 228
E AV+VF M + + P T+ L+AC++L+++ LGK+ H + I + +GN
Sbjct: 62 PEVAVEVFGDMLESGSF-PSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
AL +Y K G L + + F E K+VI WT+++S CG
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISA---CGD------------------ 159
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
NG R + LF EM ++P+ F L ++L+ C+ + + + G +H
Sbjct: 160 -----NG-----RAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLST 209
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK--- 405
+ + + +L+ +Y KCG I++A +F + K+ +W ++I G A + K
Sbjct: 210 KLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNF 269
Query: 406 --------ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
AL ++ ++ G KPD T +L+ CS +++G QI +
Sbjct: 270 SAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGE----------QIHAQ 319
Query: 458 LEHYGCLIDLLGRAGLLD 475
G L D++ L+D
Sbjct: 320 TIKSGFLSDVVVGTALVD 337
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 1/228 (0%)
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+V+ Y CG + AR +FD P R++V+WT ++ GYVQ ++ + AV +F +M P
Sbjct: 21 LVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPS 80
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
F L L C+ L ++ GK H +I + RI+ D+ + AL +Y+K G ++ +++ F
Sbjct: 81 NFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFR 140
Query: 381 ELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
E EKD SWT+II NG+ L LF +M+ +P+D T VLS CS D
Sbjct: 141 ETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDL 200
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
G + + T++ + L L+ L + G +DEA+ L ++ +N
Sbjct: 201 GMQVHSLSTKLGH-ESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKN 247
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H ++ + + V + L+ +YAKCG++ A ++F L ++ WT+++ G N +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
A+E+F M+ G+ P + T L+ACS + G++F + + Y+I
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIK-YRISHDSSIGN 120
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL--AALLE 520
L L + G LD + + R E E V + ++SAC G MG +L L E
Sbjct: 121 ALCSLYSKFGSLDSSVKAFR----ETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFE 176
Query: 521 KIESKDSSFHTLLA 534
+E D + ++L+
Sbjct: 177 NVEPNDFTLTSVLS 190
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/484 (36%), Positives = 283/484 (58%), Gaps = 6/484 (1%)
Query: 109 KVHGYVVKTGLEFDTYVCNS-IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
++H V +GL +C +++ Y + +I + +F+ +P DV +N I G +
Sbjct: 6 QLHAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLG 65
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIM 226
R D++ +F + GC L PD T L AC+ K L GK++H + I + +
Sbjct: 66 KRPYDSLLLFNELLLGC-LKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHI 124
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
++L+ MY G + EA + E +N + SM+SGY++ G ++KAR +FD+ +D+
Sbjct: 125 HSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDV 184
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
W+A+I G + EA+ALF +M + P++ LV+LL+ CA LGAL QG+WIH Y
Sbjct: 185 ASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAY 244
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I+ + ++TALI+MYAKCG I+ + F ++ +D +W +II G A+ G+ K
Sbjct: 245 IDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQAKKC 304
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLID 466
ELF +M++ G P+ + F+ +LSACSH G V+EG+ +FN M I+P +EHYGC++D
Sbjct: 305 FELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYGCMVD 364
Query: 467 LLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKD 526
LLGRAG L EAEE I +P + N +I +G++LSACR + +++ G L ++E +
Sbjct: 365 LLGRAGRLKEAEEFIISMPEKPNSVI---WGSMLSACRTHNDLNRGSWAFRHLIELEPRS 421
Query: 527 SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEM 586
+ L ++ +A ++ T +R+ +++ G+ G S IE++G IHEFLVGD H+E
Sbjct: 422 GDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDTIHNEA 481
Query: 587 KEIY 590
EIY
Sbjct: 482 AEIY 485
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 207/453 (45%), Gaps = 77/453 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +++Q+ AQ GL N +L + ++ + + YA IF I + YN +I
Sbjct: 1 MHEVRQLHAQFVVSGLL-NHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMI 59
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ SLLLF++L + PDN+TY FV KA + +G++VH ++K G+
Sbjct: 60 RGLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGIS 119
Query: 121 FDTYVCNSIMDMYGVLGKIC-------------------------------NVKKLFDEM 149
+T++ +S++ MY G I + +FD+M
Sbjct: 120 PNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQM 179
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
KDV SW+ I+G K +A+ +F M + +P+E +VS LSAC L L G
Sbjct: 180 KAKDVASWSAIITGCTKNGMHTEALALFEDMMVS-HTLPNESALVSLLSACAHLGALHQG 238
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ IH YI++ + + + AL+DMY KCG + + F +MP ++++ W +++SG+
Sbjct: 239 RWIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIY 298
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
GQ +K +LF+ EM + P+ I VA+L
Sbjct: 299 GQAKKCFELFE-------------------------------EMLADGIYPNGVIFVAIL 327
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATA------LIEMYAKCGLIEKALEIFYEL 382
+ C+ G +E+GK + N++ VD + + ++++ + G +++A E +
Sbjct: 328 SACSHAGYVEEGK-----LYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISM 382
Query: 383 REK-DAASWTSIICGLAMNGKINKALELFSQMI 414
EK ++ W S++ + +N+ F +I
Sbjct: 383 PEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLI 415
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 327/599 (54%), Gaps = 10/599 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q KQ+ A++ + + + +KL++F + +H + +A K+F + +N ++
Sbjct: 50 LRQGKQLHARLILLSVTPDNFLASKLILFYSKSNHAH--FARKVFDTTPHRNTFTWNAML 107
Query: 61 KAFAKKGSFRKSLLLFSKLR---ERGVSPDNFTYPFVFKAVGW-LGEVKKGEKVHGYVVK 116
++ FR +L LF SPDNFT V KA+ + ++VH +++
Sbjct: 108 LGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTISCVLKALASSFCSPELAKEVHCLILR 167
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
GL D +V N+++ Y ++ + +FD M ++D+V+WN I G+ + +++ +
Sbjct: 168 RGLYSDIFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGGYSQRRLYDECKRL 227
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYC 235
+ M + P+ T VS + AC +L G E+HR++ + +E + NA++ MY
Sbjct: 228 YLEMLNVSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIEIDVSLSNAVVAMYA 287
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG L ARE+F+ M K+ + + +++SGY++ G ++ A +F + +W A+I+G
Sbjct: 288 KCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVENPGLNMWNAVISG 347
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
VQ +F+ L R+MQ L P+ L ++L + L GK +HGY +
Sbjct: 348 MVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRGGKEVHGYAIRRGYEQN 407
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
V+T++I+ Y K G I A +F + + WTSII A +G AL L++QM+
Sbjct: 408 VYVSTSIIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAYAAHGDAGLALGLYAQMLD 467
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G +PD +T VL+AC+H GLVDE FN+M Y IQP +EHY C++ +L RAG L
Sbjct: 468 KGIRPDPVTLTSVLTACAHSGLVDEAWNIFNSMPSKYGIQPLVEHYACMVGVLSRAGKLS 527
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA + I ++P E + ++G LL ++G+V++G+ L +IE +++ + ++AN
Sbjct: 528 EAVQFISEMPIEPS---AKVWGPLLHGASVFGDVEIGKFACDHLFEIEPENTGNYIIMAN 584
Query: 536 IYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+YA A +WE VR++MK +G++K+ G S IE +G + F+ D S+ EIY++L+
Sbjct: 585 LYAHAGKWEQAGEVRERMKVIGLQKIRGSSWIETSGGLLSFIAKDVSNGRSDEIYALLE 643
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 316 RLKPDKFILVAL---LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
RL P A L C+ L QGK +H + +T D +A+ LI Y+K
Sbjct: 26 RLSPPGVDFAAYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSKSNHA 85
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM---ISGGAKPDDITFIGVL 429
A ++F ++ +W +++ G + N AL LF + A PD+ T VL
Sbjct: 86 HFARKVFDTTPHRNTFTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTISCVL 145
Query: 430 SA 431
A
Sbjct: 146 KA 147
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 317/600 (52%), Gaps = 84/600 (14%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRER---GVSPDNFTYPFVFKAVGWLGEVKKGEK 109
++++N ++ A+ + G R +L + ++ + PD T + A + ++ G++
Sbjct: 196 IVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQ 255
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH----- 164
VHG+ V+ GL D +V N+++ MY K+ K+F+ + KDVVSWN ++G+
Sbjct: 256 VHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGS 315
Query: 165 -------VKCMRFED-----------------------AVDVFRRMRQGCNLMPDEGTVV 194
K M+ ED A+DVFR+M Q L P+ T+
Sbjct: 316 FDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGLEPNVVTLA 374
Query: 195 STLSACTALKNLELGKEIHRYINQEL--------EFTPIMGNALLDMYCKCGCLSEAREL 246
S LS C ++ L GK+ H Y+ + + E ++ N L+DMY KC AR +
Sbjct: 375 SLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSI 434
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
FD + K+ +++V WT MI GY Q ++A+
Sbjct: 435 FDSIEGKD-----------------------------KNVVTWTVMIGGYAQHGEANDAL 465
Query: 307 ALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI--NENRITVDAVVATAL 362
LF ++ Q LKP+ F L L CA+LG L G+ +H Y NEN V V L
Sbjct: 466 KLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEV-LYVGNCL 524
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I+MY+K G I+ A +F ++ ++ SWTS++ G M+G+ +AL LF QM G D
Sbjct: 525 IDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDG 584
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
ITF+ VL ACSH G+VD+G +F+ M + + I P EHY C++DLLGRAG L+EA ELI+
Sbjct: 585 ITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIK 644
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+ E ++ + ALLSA RI+ N+++GE A+ L ++ +++ +TLL+N+YA+A R
Sbjct: 645 NMSMEPTAVV---WVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARR 701
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
W+DV +R MK G+RK PGCS I+ F VGD SH E ++IY++L + K + D
Sbjct: 702 WKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKD 761
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 260/489 (53%), Gaps = 28/489 (5%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N LI+ K G +L + +++ G PD++T+PFV KA G + ++ G VH V
Sbjct: 95 WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK---DVVSWNVSISGHVKCMRFED 172
GL + ++CNSI+ MYG G + + ++FDE+ ++ D+VSWN ++ +V+ +
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214
Query: 173 AVDVFRRM--RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNA 229
A+ + RM L PD T+V+ L AC ++ L+ GK++H + + L +GNA
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF----DRSPVRD 285
L+ MY KC ++EA ++F+ + K+V+ W +MV+GY G + A LF + D
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
++ W+A+I GY Q EA+ +FR+MQ+ L+P+ L +LL+GCA +GAL GK H
Sbjct: 335 VITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHA 394
Query: 346 YINENRITV-------DAVVATALIEMYAKCGLIEKALEIF--YELREKDAASWTSIICG 396
Y+ +N + + D +V LI+MYAKC A IF E ++K+ +WT +I G
Sbjct: 395 YVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGG 454
Query: 397 LAMNGKINKALELFSQMI--SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
A +G+ N AL+LF+Q+ KP+ T L AC+ G + GR+
Sbjct: 455 YAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENE 514
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
L CLID+ ++G +D A + + N V + +L++ YG GE+
Sbjct: 515 SEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRN----VVSWTSLMTG---YGMHGRGEE 567
Query: 515 LAALLEKIE 523
L ++++
Sbjct: 568 ALHLFDQMQ 576
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 186/430 (43%), Gaps = 80/430 (18%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER------------------ 82
A K+F I+ ++++N ++ +++ GSF +L LF ++E
Sbjct: 288 ANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQ 347
Query: 83 -----------------GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL------ 119
G+ P+ T + +G + G++ H YV+K L
Sbjct: 348 KGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWND 407
Query: 120 -EFDTYVCNSIMDMYGVLGKICNVKKLFD--EMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
E D V N ++DMY + +FD E DK+VV+W V I G+ + DA+ +
Sbjct: 408 KEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKL 467
Query: 177 FRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDM 233
F ++ +Q +L P+ T+ L AC L L LG+++H Y N+ +GN L+DM
Sbjct: 468 FAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDM 527
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y K G + AR +FD M +NV+ WTS+++GY G
Sbjct: 528 YSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHG------------------------ 563
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRI 352
R +EA+ LF +MQ + D + +L C+ G ++QG + H + I
Sbjct: 564 -------RGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGI 616
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFS 411
T A ++++ + G + +A+E+ + E A W +++ ++ I S
Sbjct: 617 TPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAAS 676
Query: 412 QMISGGAKPD 421
++ GA+ D
Sbjct: 677 KLTELGAEND 686
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 315/612 (51%), Gaps = 44/612 (7%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F +++ T N ++ + ++G L A F SI P +YN L+ A S
Sbjct: 128 RLFAAMPRRSTSTYNTMLA--GYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSL 185
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFK----------------------AVGWLG----E 103
LF ++ + D+ +Y + AV W G
Sbjct: 186 ADVRALFDEMPVK----DSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAY 241
Query: 104 VKKGEKVHGY-VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
V+ G + + E+D N++M Y +I +K+F++MP +DVVSWN +S
Sbjct: 242 VRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVS 301
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF 222
G+ + +A +F ++ P T +N L +E R + +
Sbjct: 302 GYARRGDMAEARRLF-------DVAPIRDVFTWTAIVSGYAQNGML-EEAKRVFDAMPDK 353
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
+ NA++ Y + + EA+ELFD MP +NV W +M++GY G L++AR +F P
Sbjct: 354 NAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMP 413
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
+D V W AM+ Y Q +E + LF+EM ++ +L+ CA + ALE G
Sbjct: 414 QKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 473
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H + + V V AL+ MY KCG +E+A F E+ E+D SW ++I G A +G
Sbjct: 474 LHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGF 533
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+ALE+F M KPDDIT +GVL+ACSH GLV++G +F +M + + K EHY
Sbjct: 534 GKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYT 593
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C+IDLLGRAG LDEA L++ +P E + ++GALL A RI+ N ++G A + ++
Sbjct: 594 CMIDLLGRAGRLDEAVNLMKDMPFEPDST---MWGALLGASRIHRNSELGRNAAEKIFEL 650
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E +++ + LL+NIYAS+ +W DV +R M E GV+KVPG S IE+ +H F VGD
Sbjct: 651 EPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSV 710
Query: 583 HSEMKEIYSMLD 594
H E ++IY+ L+
Sbjct: 711 HPEREDIYAFLE 722
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 162/335 (48%), Gaps = 35/335 (10%)
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ----GCNLMPDEGT 192
G++ + ++LF MP + ++N ++G+ R A+ FR + + N +
Sbjct: 121 GRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALG 180
Query: 193 VVSTLSACTAL-------------------KNLELGKEIHRYINQELEFTPIMGNALLDM 233
V S+L+ AL N L Y + E + N +L
Sbjct: 181 VSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAA 240
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y + G + EARELFD + I W ++++GYV Q+E+A+ +F++ P RD+V W M+
Sbjct: 241 YVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMV 300
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+GY + EA LF ++ IR D F A+++G AQ G LE+ K + + +
Sbjct: 301 SGYARRGDMAEARRLF-DVAPIR---DVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK--- 353
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+AV A++ Y + ++E+A E+F + ++ ASW +++ G A G +++A +F M
Sbjct: 354 -NAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMM 412
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
+ D +++ +L+A S G +E + F M
Sbjct: 413 ----PQKDAVSWAAMLAAYSQIGFSEETLQLFKEM 443
>gi|297805312|ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 194/568 (34%), Positives = 318/568 (55%), Gaps = 50/568 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L QI A+I + GL+Q+ L+ S +L Y+ +F + P +N LIK
Sbjct: 25 HLNQIHARIIRKGLEQD----QNLISIFISSSSSSLSYSSSVFERVPYPGTYLWNHLIKG 80
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
++ K F +++ L ++ G + PD +T+P V K E + G VHG V++ G +
Sbjct: 81 YSNKFLFFETVSLLMRMMRTGFARPDEYTFPLVMKVCSNNAEFRVGSTVHGLVLRIGFDK 140
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D + S +D YG +C+ +K+F EMP+++VVSW I +VK E+A +F
Sbjct: 141 DVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALIVAYVKSGELEEAKRMF---- 196
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+LMP+ +NL NAL+D K G L
Sbjct: 197 ---DLMPE--------------RNLG------------------TWNALVDGLVKSGDLV 221
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
AR+LFDEMP +++I +TSM+ GY G + ARDLF+ + D+ W+A+I GY Q +
Sbjct: 222 NARKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNGQ 281
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE--NRITVDAVVA 359
+EA +F EM +KPD+FI+V L++ C+Q+G E + + Y+++ N+ + V+
Sbjct: 282 PNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVI- 340
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI+M AKCG +++A ++F E+ ++D S+ S++ G+A++G ++A+ LF +M+ G
Sbjct: 341 PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAVRLFEKMVDEGIV 400
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD++ F +L CS LV+EG R+F M + Y I +HY C+++LL R G L EA E
Sbjct: 401 PDEVAFTVILKVCSQSRLVEEGLRYFELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYE 460
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI+ +P E + +G+LL C ++GN ++ E +A L ++E + + + LL+NIYA+
Sbjct: 461 LIKSMPFEAH---ASAWGSLLGGCSLHGNTEIAEVVARQLFELEPQSAGSYVLLSNIYAA 517
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+RW D+ ++R KM E G++K+ G S I
Sbjct: 518 LDRWADLAHLRDKMNENGIKKICGRSWI 545
>gi|356564579|ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 321/571 (56%), Gaps = 28/571 (4%)
Query: 3 QLKQIQAQIFQIGLQ-QNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q KQI A I G P +++++++ YA + + P ++ +I+
Sbjct: 18 QAKQIHAHILINGFTFLRPLLIHRMLLWDVTNYRTMANYAYSMLHHLHIPDSFSWGCVIR 77
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
F++K F +++ L+ ++ + P + K+ + ++ G +HG V G
Sbjct: 78 FFSQKCLFTEAVSLYVQMHRTSLCPTSHAVSSALKSCARIHDMLCGMSIHGQVHVFGFNT 137
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
YV +++D+Y +G + +K+FDEM +K VVSWN +SG+VK ++A +F +
Sbjct: 138 CVYVQTALLDLYSKIGDMGTARKVFDEMANKSVVSWNSLLSGYVKAGNLDEAQYLFSEIP 197
Query: 182 -----QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCK 236
+++ + ACT + + E NA++ +
Sbjct: 198 GKDVISWNSMISGYAKAGNVGQACTLFQRMP-------------ERNLSSWNAMIAGFID 244
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG L ARE FD MP +N + W +M++GY G ++ AR LFD+ +D++ + AMI Y
Sbjct: 245 CGSLVSAREFFDTMPRRNCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLLSYNAMIACY 304
Query: 297 VQFNRFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITV 354
Q ++ EA+ LF +M Q I + PDK L ++++ C+QLG LE WI ++N+ I +
Sbjct: 305 AQNSKPKEALELFNDMLKQDIYVHPDKMTLASVISACSQLGDLEHWWWIESHMNDFGIVL 364
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
D +ATALI++YAKCG I+KA E+F+ LR++D +++++I G +NGK + A++LF QM+
Sbjct: 365 DDHLATALIDLYAKCGSIDKAYELFHNLRKRDLVAYSAMIYGCGINGKASDAIKLFEQML 424
Query: 415 SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLL 474
+ P+ +T+ G+L+A +H GLV++G + FN+M + Y + P ++HYG ++DL GRAG L
Sbjct: 425 AECIGPNLVTYTGLLTAYNHAGLVEKGYQCFNSMKD-YGLVPSIDHYGIMVDLFGRAGYL 483
Query: 475 DEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
DEA +LI +P + N ++GALL ACR++ NV++GE K+E+ + + +LL+
Sbjct: 484 DEAYKLILNMPMQPN---AGVWGALLLACRLHNNVELGEIAVQHCIKLETDTTGYCSLLS 540
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+IYA+ +W+D +R+ M+ + GCS
Sbjct: 541 SIYATVEKWDDAKKLRKGMEG---KDFTGCS 568
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 219/477 (45%), Gaps = 26/477 (5%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG--KICNVK-KLFDEMPDKDVVSWNVS 160
VK+ +++H +++ G F + M ++ V + N + + D SW
Sbjct: 16 VKQAKQIHAHILINGFTFLRPLLIHRMLLWDVTNYRTMANYAYSMLHHLHIPDSFSWGCV 75
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
I + F +AV ++ +M + +L P V S L +C + ++ G IH ++
Sbjct: 76 IRFFSQKCLFTEAVSLYVQMHR-TSLCPTSHAVSSALKSCARIHDMLCGMSIHGQVHVFG 134
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ ALLD+Y K G + AR++FDEM NK+V+ W S++SGYV G L++A+ LF
Sbjct: 135 FNTCVYVQTALLDLYSKIGDMGTARKVFDEMANKSVVSWNSLLSGYVKAGNLDEAQYLFS 194
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
P +D++ W +MI+GY + +A LF+ M L A++ G G+L
Sbjct: 195 EIPGKDVISWNSMISGYAKAGNVGQACTLFQRMPERNLSSWN----AMIAGFIDCGSLVS 250
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
+ + + V +I Y+K G ++ A ++F ++ KD S+ ++I A
Sbjct: 251 AREFFDTMPRR----NCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLLSYNAMIACYAQ 306
Query: 400 NGKINKALELFSQMISGG--AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
N K +ALELF+ M+ PD +T V+SACS G ++ + M + + I
Sbjct: 307 NSKPKEALELFNDMLKQDIYVHPDKMTLASVISACSQLGDLEHWWWIESHMND-FGIVLD 365
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL-A 516
LIDL + G +D+A EL + + + Y A++ C I G KL
Sbjct: 366 DHLATALIDLYAKCGSIDKAYELFHNLRKRD----LVAYSAMIYGCGINGKASDAIKLFE 421
Query: 517 ALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGII 573
+L + + +T L Y A E MK+ G+ VP SI+ GI+
Sbjct: 422 QMLAECIGPNLVTYTGLLTAYNHAGLVEKGYQCFNSMKDYGL--VP---SIDHYGIM 473
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/381 (41%), Positives = 255/381 (66%), Gaps = 3/381 (0%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N +L Y G ++EAR++FD M ++++ W +M+ GY G + AR++FD + RD
Sbjct: 120 NVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAF 179
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W++MI+ Y + EA+ L+REM++ + PD +V++L+ C+ +GAL G +H ++
Sbjct: 180 SWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFV 239
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
NR+ VD + TAL++MYAKCG IE +L++F+ + KD +W+S+I GLA +G + AL
Sbjct: 240 ESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDAL 299
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LFS+MIS G +P++ITFIGVL AC+H GLV++G+++F++M++V+ + P++EHYGC++DL
Sbjct: 300 SLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDL 359
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG ++EA ELIR + + + II + LL ACRI+ NV++ E+ A L+ ++
Sbjct: 360 LGRAGHVEEAMELIRSMTFKPDPII---WRTLLGACRIHKNVEIAEEAMAKLKVLDPLAD 416
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ LL+NIYA AN WE V +R+ ++ +++VPG SSIE +HEF+ GD SH ++
Sbjct: 417 GHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIE 476
Query: 588 EIYSMLDRMAKTLLDSKQNAM 608
EIY ML+ M L + M
Sbjct: 477 EIYKMLEEMMDRLRQAGYRPM 497
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 180/385 (46%), Gaps = 49/385 (12%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L+A + + L L++ +AK + + L + D F +
Sbjct: 66 GASLHARALRSGFAAADLFVRTALVEMYAKTAA--GEIALARAAFDEAPRRDVFLCNVML 123
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A GEV + KV + +G + ++ N+++ Y V G + +++FD D+D
Sbjct: 124 AAYVARGEVAEARKV--FDGMSGRDLVSW--NTMIHGYAVRGDVGMAREIFDGTRDRDAF 179
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SW+ IS + K ++A++++R MR + PD ++VS LSAC+A+ L +G E+HR+
Sbjct: 180 SWSSMISAYAKGRCSKEALELWREMRVA-GVAPDCISMVSVLSACSAMGALAIGAEVHRF 238
Query: 216 I-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
+ + +E +G AL+DMY KCG + + ++F MP K+V+ W+SM+ G N G
Sbjct: 239 VESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGL---- 294
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
G+ +A++LF EM L+P++ + +L C +
Sbjct: 295 --------------------GH-------DALSLFSEMISQGLQPNEITFIGVLIACTHV 327
Query: 335 GALEQGKWIHGYINENRITVDAVVAT-----ALIEMYAKCGLIEKALEIFYELREK-DAA 388
G + GK +++ V VV ++++ + G +E+A+E+ + K D
Sbjct: 328 GLVNDGKKYFSSMSD----VHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPI 383
Query: 389 SWTSIICGLAMNGKINKALELFSQM 413
W +++ ++ + A E +++
Sbjct: 384 IWRTLLGACRIHKNVEIAEEAMAKL 408
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +IF + +++ +I A+AK +++L L+ ++R GV+PD + V
Sbjct: 161 GDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVL 220
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +G + G +VH +V +E D + +++DMY G I N K+F MP KDV+
Sbjct: 221 SACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVL 280
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
+W+ I G DA+ +F M QG L P+E T + L ACT + + GK+
Sbjct: 281 TWSSMIIGLANHGLGHDALSLFSEMISQG--LQPNEITFIGVLIACTHVGLVNDGKKYFS 338
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQL 271
++ P M + ++D+ + G + EA EL M K + I W +++ +
Sbjct: 339 SMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNV 398
Query: 272 EKARDLFDRSPVRDIVL---WTAMINGYVQFNRFDEAVALFRE 311
E A + + V D + + + N Y Q N + E VA R+
Sbjct: 399 EIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSW-EGVAEMRK 440
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 327/632 (51%), Gaps = 76/632 (12%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L +A F ++ ++A+N +++ G F K++ + + + GV+PDN+TYP V
Sbjct: 81 GSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVL 140
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA L ++ G VH + + + YV +++DM+ G + + +++F+EMPD+D+
Sbjct: 141 KACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLA 199
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR- 214
SW I G + +A+ +FR+MR LMPD V S L AC L+ ++LG +
Sbjct: 200 SWTALICGTMWNGECLEALLLFRKMRSE-GLMPDSVIVASILPACGRLEAVKLGMALQVC 258
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV-NC----- 268
+ E + NA++DMYCKCG EA +F M +V+ W+++++GY NC
Sbjct: 259 AVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQES 318
Query: 269 --------------------------GQLEKARD-------LFDRSPVRDIVLWTAMING 295
G+LE + + + D+V+ +A+I
Sbjct: 319 YKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVM 378
Query: 296 YVQFNRFDEAVAL-------------------------------FREMQIIRLKPDKFIL 324
Y EA ++ FR + +P+ +
Sbjct: 379 YANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITV 438
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
V++L C Q+GAL QGK IHGY+ ++ + ++ V +LI+MY+KCG +E ++F ++
Sbjct: 439 VSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMV 498
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
++ ++ ++I +G+ K L + QM G +P+ +TFI +LSACSH GL+D G
Sbjct: 499 RNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLL 558
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
+N+M Y I+P +EHY C++DL+GRAG LD A + I ++P + + +G+LL ACR
Sbjct: 559 YNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANV---FGSLLGACR 615
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGC 564
++ V++ E LA + ++++ DS + LL+N+YAS RWED++ VR +K+ G+ K PG
Sbjct: 616 LHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGS 675
Query: 565 SSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
S I++ I+ F H +I L+ +
Sbjct: 676 SWIQVGHCIYVFHATSAFHPAFAKIEETLNSL 707
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 172/389 (44%), Gaps = 38/389 (9%)
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL--- 119
F K + +L + R++ P +FT F + + + +H ++ G
Sbjct: 3 FGTKVNAHAIAMLITFTRQQHSLPIHFTVT-SFHRLKSPPNLHEARTLHALLLVLGFFQP 61
Query: 120 --EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
+ + ++++Y G + + F +P K +++WN + G V F A+ +
Sbjct: 62 TCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFY 121
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
M Q + PD T L AC++L L+LG+ +H ++ + + + A++DM+ KC
Sbjct: 122 HSMLQH-GVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKC 180
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
G +E AR +F+ P RD+ WTA+I G +
Sbjct: 181 G-------------------------------SVEDARRMFEEMPDRDLASWTALICGTM 209
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
EA+ LFR+M+ L PD I+ ++L C +L A++ G + + D
Sbjct: 210 WNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLY 269
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V+ A+I+MY KCG +A +F + D SW+++I G + N ++ +L+ MI+ G
Sbjct: 270 VSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVG 329
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+ I VL A L+ +G+ N
Sbjct: 330 LATNAIVATSVLPALGKLELLKQGKEMHN 358
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 20/194 (10%)
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
A+ L+ +Y G ++ A F L K +W +I+ GL G KA+ + M+ G
Sbjct: 70 ASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGV 129
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
PD+ T+ VL ACS + GR TM + ++ +ID+ + G +++A
Sbjct: 130 TPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQ--CAVIDMFAKCGSVEDAR 187
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL--EKIESK----DSSFHTL 532
+ ++P+ + + + AL I G + GE L ALL K+ S+ DS +
Sbjct: 188 RMFEEMPDRD----LASWTAL-----ICGTMWNGECLEALLLFRKMRSEGLMPDS---VI 235
Query: 533 LANIYASANRWEDV 546
+A+I + R E V
Sbjct: 236 VASILPACGRLEAV 249
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/599 (32%), Positives = 315/599 (52%), Gaps = 56/599 (9%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F ++ + L+++N ++ + + G R L F ++ ER V N F VG
Sbjct: 159 ARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVD-GFVEVGD 217
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L E + + T +C + GKI ++LFD+MP ++VV+WN
Sbjct: 218 LNS--SWEFFEKIPNPNTVSWVTMLCG-----FARFGKIAEARRLFDQMPIRNVVAWNAM 270
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN-LELGK--EIHRYIN 217
I+ +V+ ++A+ +F M P++ ++ S T + + +GK E + +N
Sbjct: 271 IAAYVQNCHVDEAISLFMEM-------PEKNSI----SWTTVINGYVRMGKLDEARQLLN 319
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
Q A++ Y + + +AR++F+++ ++V+CW +M++GY CG++++A L
Sbjct: 320 QMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHL 379
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL-------------------- 317
F + +DIV W M+ Y Q + D A+ +F EM+ +
Sbjct: 380 FKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDAL 439
Query: 318 -----------KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
KPD+ L+ CA L AL+ GK +H + ++ D V+ ALI MY
Sbjct: 440 KSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMY 499
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
AKCG I A +F ++ D SW S+I A+NG +AL+LF +M G PD++TF+
Sbjct: 500 AKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFV 559
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
G+LSACSH GL+D+G + F M + Y I+P EHY C++DLLGRAG L+EA +L+R +
Sbjct: 560 GILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKI 619
Query: 487 ENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDV 546
N I +GALL ACRI+GN+++ + A L + E +S + LL+N+ A A RW++V
Sbjct: 620 NANAGI---WGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEV 676
Query: 547 TNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQ 605
VR+ MKE G K PG S IE+ +H FL DP+H E+ +L + + ++ +
Sbjct: 677 ARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTAK 735
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 242/539 (44%), Gaps = 71/539 (13%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGV----------- 84
G + A K+F + + +N +I AFAK G + LF + +R +
Sbjct: 29 GQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYL 88
Query: 85 ----------------SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
+ D +++ + GE+ K + + +++ CN+
Sbjct: 89 HNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNA 145
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ----GC 184
++ Y + ++LFD MP KD+VSWN ++G+ + + F M +
Sbjct: 146 MVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSW 205
Query: 185 NLMPDEGTVV----------------STLSACTALKNL-ELGK--EIHRYINQELEFTPI 225
NLM D V +T+S T L GK E R +Q +
Sbjct: 206 NLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVV 265
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
NA++ Y + + EA LF EMP KN I WT++++GYV G+L++AR L ++ P R+
Sbjct: 266 AWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN 325
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
+ TAMI+GYVQ R D+A +F ++ I D ++ G +Q G +++ +H
Sbjct: 326 VAAQTAMISGYVQNKRMDDARQIFNQISI----RDVVCWNTMIAGYSQCGRMDEA--LHL 379
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+ + + D V ++ YA+ G ++ A++IF E++EK+ SW S+I GL NG
Sbjct: 380 F--KQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLD 437
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN-TMTEVYQIQPKLEHYGCL 464
AL+ F M G KPD TF LS+C+H + G++ M Y L L
Sbjct: 438 ALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATD--LFVSNAL 495
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
I + + G + AE L + I + V + +L++A + GN G + L K+E
Sbjct: 496 ITMYAKCGSISSAELLFKDI----DHFDVVSWNSLIAAYALNGN---GREALKLFHKME 547
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 193/398 (48%), Gaps = 32/398 (8%)
Query: 89 FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
F + +G G++ + KV ++ +T NS++ + G+I + ++LFD
Sbjct: 16 FRHNLKITQLGKSGQIDEAIKVFQHMTHK----NTVTHNSMISAFAKNGRISDARQLFDG 71
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP +++VSWN I+ ++ R E+A +F +M P TL +N EL
Sbjct: 72 MPQRNIVSWNSMIAAYLHNDRVEEARQLFDKM-------PTRDLYSWTLMITCYTRNGEL 124
Query: 209 GKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
K + + ++ P+ NA++ Y K EAR LFD MP K+++ W SM++GY
Sbjct: 125 AKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRN 184
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G++ F+ RD+V W M++G+V+ + + F ++ P+ V +L
Sbjct: 185 GEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP----NPNTVSWVTML 240
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELREKDA 387
G A+ G + + + + +++ + VVA A+I Y + +++A+ +F E+ EK++
Sbjct: 241 CGFARFGKIAEARRLF-----DQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNS 295
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
SWT++I G GK+++A +L +QM ++S +D+ R+ FN
Sbjct: 296 ISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQ----TAMISGYVQNKRMDDARQIFN- 350
Query: 448 MTEVYQIQPK-LEHYGCLIDLLGRAGLLDEAEELIRKI 484
QI + + + +I + G +DEA L +++
Sbjct: 351 -----QISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM 383
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 162/339 (47%), Gaps = 30/339 (8%)
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+ N+++ + K G +S+AR+LFD MP +N++ W SM++ Y++ ++E+AR LFD+ P R
Sbjct: 47 VTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTR 106
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
D+ WT MI Y + +A LF ++ K + A++ G A+ ++ + +
Sbjct: 107 DLYSWTLMITCYTRNGELAKARNLF---NLLPYKWNPVCCNAMVAGYAKNRQFDEARRLF 163
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ D V +++ Y + G + L+ F E+ E+D SW ++ G G +N
Sbjct: 164 DAMPAK----DLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLN 219
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
+ E F ++ P+ ++++ +L + G + E RR F+ M + + +
Sbjct: 220 SSWEFFEKI----PNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVA-----WNAM 270
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG--EKLAALLEKI 522
I + +DEA L ++P +N ++ I G V MG ++ LL ++
Sbjct: 271 IAAYVQNCHVDEAISLFMEMPEKN---------SISWTTVINGYVRMGKLDEARQLLNQM 321
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
++ + T + + Y R +D RQ ++ +R V
Sbjct: 322 PYRNVAAQTAMISGYVQNKRMDD---ARQIFNQISIRDV 357
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 192/448 (42%), Gaps = 95/448 (21%)
Query: 19 NPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK 78
NP T++ + + C G + A ++F + ++A+N +I A+ + +++ LF +
Sbjct: 230 NPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFME 289
Query: 79 LRERGVSPDNFTYPFVFKAVGWLGEVKKGEK----------------VHGYVVKTGLE-- 120
+ E+ ++ ++ V +G++ + + + GYV ++
Sbjct: 290 MPEK----NSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDA 345
Query: 121 ---------FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFE 171
D N+++ Y G++ LF +M KD+VSWN ++ + + + +
Sbjct: 346 RQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMD 405
Query: 172 DAVDVFRRMRQ----------------GCNL--------------MPDEGTVVSTLSACT 201
A+ +F M++ G L PD+ T LS+C
Sbjct: 406 AAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCA 465
Query: 202 ALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTS 260
L L++GK++H+ + + T + + NAL+ MY KCG +S A LF ++ + +V+ W S
Sbjct: 466 HLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNS 525
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+++ Y G NG EA+ LF +M++ + PD
Sbjct: 526 LIAAYALNG------------------------NG-------REALKLFHKMEVEGVAPD 554
Query: 321 KFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+ V +L+ C+ +G ++QG K + I A ++++ + G +E+A ++
Sbjct: 555 EVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLV 614
Query: 380 YELR-EKDAASWTSIICGLAMNGKINKA 406
++ +A W +++ ++G + A
Sbjct: 615 RGMKINANAGIWGALLGACRIHGNLELA 642
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 15/288 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A KIF ++ ++++N LI + GS+ +L F + G PD T+
Sbjct: 402 GQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGL 461
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+ L ++ G+++H V+K+G D +V N+++ MY G I + + LF ++ DVV
Sbjct: 462 SSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVV 521
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
SWN I+ + +A+ +F +M +G + PDE T V LSAC+ + ++ G ++ +
Sbjct: 522 SWNSLIAAYALNGNGREALKLFHKMEVEG--VAPDEVTFVGILSACSHVGLIDQGLKLFK 579
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+ Q P+ + ++D+ + G L EA +L M N N W +++ G L
Sbjct: 580 CMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNL 639
Query: 272 EKARDL------FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
E A+ F+ + VL + N + R+DE + R M+
Sbjct: 640 ELAKFAAEKLLEFEPHKTSNYVL---LSNMQAEAGRWDEVARVRRLMK 684
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/468 (38%), Positives = 267/468 (57%), Gaps = 37/468 (7%)
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
+ G + +LF + + D WN I G + +A+ ++ +M GC + PD+ T
Sbjct: 23 AISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGC-VRPDKFTF 81
Query: 194 VSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEAR-------- 244
L ACT L +++G +H R E + N L+ + CG L+ AR
Sbjct: 82 PFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAK 141
Query: 245 -----------------------ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+LFDEMP K+++ W M++GY G++E AR LFD
Sbjct: 142 RDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEV 201
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P RD+V W AMI GYV +A+ +F EM+ + PD+ +++LL+ C LG L+ G+
Sbjct: 202 PKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQ 261
Query: 342 WIHGYINENRI-TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
IH I+E + ++ ALI+MYAKCG I +ALE+F +REKD ++W S++ GLA +
Sbjct: 262 RIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFH 321
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G K++ LF++M +PD+ITF+GVL ACSH G V+EGR++F+ M + Y I+P + H
Sbjct: 322 GHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRH 381
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLE 520
YGC++DLLGRAGLL+EA + I + E N I+ + LL ACRI+GNV++G + L
Sbjct: 382 YGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIV---WRTLLGACRIHGNVELGRRANMQLL 438
Query: 521 KIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
K+ +S + LL+NIYAS W+ V VR+ M + GVRK GCS IE
Sbjct: 439 KMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 486
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 207/455 (45%), Gaps = 98/455 (21%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLL 74
G N L +L+ + G + YA ++F I P +N +I+ A+ S ++
Sbjct: 5 GFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAIS 64
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM---- 130
L+S++ V PD FT+PFV KA L VK G VHG V + G E +T+V N+++
Sbjct: 65 LYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHA 124
Query: 131 ---DM------------------------YGVLGKICNVKKLFDEMPDKDVVSWNVSISG 163
D+ Y G++ ++LFDEMP KD+VSWNV I+G
Sbjct: 125 NCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITG 184
Query: 164 HVK-------------------------------CMRFEDAVDVFRRMRQGCNLMPDEGT 192
+ K C + A+++F MR L PDE T
Sbjct: 185 YAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL-PDEVT 243
Query: 193 VVSTLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
++S LSACT L +L+ G+ IH I++ + + ++GNAL+DMY KCG + A E+F M
Sbjct: 244 MLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGM 303
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
K+V W S++ G G EK ++ LF
Sbjct: 304 REKDVSTWNSVLGGLAFHGHAEK-------------------------------SIHLFT 332
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKC 369
EM+ ++++PD+ V +L C+ G +E+G+ + +E I + ++++ +
Sbjct: 333 EMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRA 392
Query: 370 GLIEKALEIFYELR-EKDAASWTSIICGLAMNGKI 403
GL+ +A + ++ E +A W +++ ++G +
Sbjct: 393 GLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNV 427
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 301/552 (54%), Gaps = 35/552 (6%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
++F + + ++N +I F + G K+L LF ++ G P++ + A L
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+++G+++H VK G E D YV ++++DMYG + +++F +MP K +V+WN I
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 163 GHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
G+V + V++ RM +G P + T+ S L AC+ +NL GK IH Y+ + +
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTR--PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVV 340
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
NA D+Y C S++ Y CG+ A +F ++
Sbjct: 341 ------NA--DIYVNC----------------------SLIDLYFKCGEANLAETVFSKT 370
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
W MI+ Y+ + +AV ++ +M + +KPD ++L C+QL ALE+GK
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
IH I+E+R+ D ++ +AL++MY+KCG ++A IF + +KD SWT +I +G
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ +AL F +M G KPD +T + VLSAC H GL+DEG +FF+ M Y I+P +EHY
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY 550
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C+ID+LGRAG L EA E+I++ P ++ L L SAC ++ +G+++A LL +
Sbjct: 551 SCMIDILGRAGRLLEAYEIIQQTPETSDN--AELLSTLFSACCLHLEHSLGDRIARLLVE 608
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
D+S + +L N+YAS W+ VR KMKEMG+RK PGCS IE++ + F D
Sbjct: 609 NYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDR 668
Query: 582 SHSEMKEIYSML 593
SH + +Y L
Sbjct: 669 SHLRAENVYECL 680
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/504 (30%), Positives = 256/504 (50%), Gaps = 41/504 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ ++K + +I +GL+++ L+ V+ T H + + + F I+S + +N L
Sbjct: 20 LRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF-DIRSDVYI-WNSL 77
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ ++K F +L +F +L + PD+FT+P V KA G LG G +H VVK+G
Sbjct: 78 MSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSG 137
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
D V +S++ MY N ++FDEMP++DV SWN IS + E A+++F
Sbjct: 138 YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFG 197
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKC 237
RM + P+ ++ +SAC+ L LE GKEIHR + + E + +AL+DMY KC
Sbjct: 198 RM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
CL ARE+F +MP K+++ W SM+ GYV G + ++ +R
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR----------------- 299
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
M I +P + L ++L C++ L GK+IHGY+ + + D
Sbjct: 300 --------------MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V +LI++Y KCG A +F + ++ A SW +I G KA+E++ QM+S G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
KPD +TF VL ACS +++G++ +++E +++ L+D+ + G EA
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEA 464
Query: 478 EELIRKIPNENN---EIIVPLYGA 498
+ IP ++ +++ YG+
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGS 488
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 195/418 (46%), Gaps = 43/418 (10%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + L+A+N +IK + KG + + + +++ G P T + A
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ G+ +HGYV+++ + D YV S++D+Y G+ + +F + SWNV
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
IS ++ + AV+V+ +M + PD T S L AC+ L LE GK+IH I++
Sbjct: 382 ISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
LE ++ +ALLDMY KCG EA +F+ +P K+V+ WT M+S Y + GQ
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR------- 493
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
EA+ F EMQ LKPD L+A+L+ C G +++
Sbjct: 494 ------------------------EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDE 529
Query: 340 GKWIHGYINENRITVDAVVA--TALIEMYAKCGLIEKALEIFYELRE-KDAASWTSII-- 394
G + ++ ++ ++ + +I++ + G + +A EI + E D A S +
Sbjct: 530 GLKFFSQM-RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFS 588
Query: 395 -CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
C L + + + ++++ D T++ + + + G D RR M E+
Sbjct: 589 ACCLHLEHSLGDRI---ARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEM 643
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 184/410 (44%), Gaps = 32/410 (7%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVKCM 168
VH ++ GL D +C S++++Y C+ + +F+ + DV WN +SG+ K
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN 228
F D ++VF+R+ +PD T + + A AL LG+ IH +
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV------------ 133
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
K G + +V+ +S+V Y E + +FD P RD+
Sbjct: 134 ------VKSGYVC------------DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVAS 175
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W +I+ + Q ++A+ LF M+ +P+ L ++ C++L LE+GK IH
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ +D V +AL++MY KC +E A E+F ++ K +W S+I G G +E
Sbjct: 236 KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
+ ++MI G +P T +L ACS + G +F + + + LIDL
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
+ G + AE + K + E + + +S + V++ +++ ++
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV 404
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 16/291 (5%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
AE +F Q ++N++I ++ G++ K++ ++ ++ GV PD T+ V A
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L ++KG+++H + ++ LE D + ++++DMY G ++F+ +P KDVVSW V
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVM 482
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
IS + + +A+ F M Q L PD T+++ LSAC ++ G + + +
Sbjct: 483 ISAYGSHGQPREALYQFDEM-QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVNCGQLEK--- 273
PI+ + ++D+ + G L EA E+ + P + N +++ S C LE
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSA--CCLHLEHSLG 599
Query: 274 ---ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI--IRLKP 319
AR L + P D + + N Y +D A + +M+ +R KP
Sbjct: 600 DRIARLLVENYP-DDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKP 649
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 270/421 (64%), Gaps = 19/421 (4%)
Query: 186 LMPDEGTVVSTLSACTALK-NLELGKEIHRYINQELEF----TPIMGNALLDMYCKCGCL 240
++P+ T + C+ L+ +G+ IH ++ L+F +GN+L+ ++ G
Sbjct: 124 IVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHV---LKFGFLNDVFVGNSLISLFMNFGLS 180
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
AR++FDEM ++V+ W SMV GY+ G++E A +LF + R+I+ W ++I G VQ
Sbjct: 181 KNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAG 240
Query: 301 RFDEAVALFREMQIIR----LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
E++ +F EMQ + +KPDK + ++L+ CA LG+++ GKW+H Y+ +N I D
Sbjct: 241 HAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDV 300
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ TAL+ MY KCG +++A+EIF ++ EKDA++WT++I A++G KA + F +M
Sbjct: 301 VIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKA 360
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G KP+ +TF+G+LSACSH GLV++GR F+ M VY I+P++ HY C++D+L RA L DE
Sbjct: 361 GVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDE 420
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A LIR +P + + V ++GALL C+++GN+ +GEK+A L +E + +F+ L +I
Sbjct: 421 ALFLIRSMPMKPD---VYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDI 477
Query: 537 YASANRWEDVTNVRQKMKEMGVR-KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
Y A +++ +R MKE G+ K+PGCS IEING++ EF VG+ MKE+ +LDR
Sbjct: 478 YVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVGEIP---MKELPLVLDR 534
Query: 596 M 596
+
Sbjct: 535 L 535
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 251/537 (46%), Gaps = 91/537 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPET---LNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ ++K I I + + + +L+ FC+ ++ + YA +F I+ P L YN
Sbjct: 32 LKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHMIKYPELRVYN 91
Query: 58 LLIKAFA------KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL---GEVKKGE 108
++I+++ K+L+L+ ++ +G+ P+N T+PF+ K L G V GE
Sbjct: 92 IMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGGTV--GE 149
Query: 109 KVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCM 168
+H +V+K G D +V NS++ ++ G N +K+FDEM +DVVSWN + G+++
Sbjct: 150 VIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNG 209
Query: 169 RFEDAVDVFRRMRQGCNLM-----------------------------------PDEGTV 193
E A+++FR+M G N++ PD+ T+
Sbjct: 210 EVEMALNLFRKM-NGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITI 268
Query: 194 VSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
S LSAC L +++ GK +H Y+ + ++E ++G AL++MY KCG + +A E+F++MP
Sbjct: 269 ASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPE 328
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+ WT+M+S + G +KA D F EM
Sbjct: 329 KDASAWTAMISVFALHGFGKKAFD-------------------------------CFLEM 357
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGL 371
+ +KP+ V LL+ C+ G +EQG+ + + A ++++ ++ L
Sbjct: 358 EKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARL 417
Query: 372 IEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF-IGVL 429
++AL + + K D W +++ G M+G I ++ +I +P + F I +
Sbjct: 418 FDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLID--LEPHNHAFYINLC 475
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC-LIDLLGRAGLLDEAEELIRKIP 485
G D +R N+M E I+ K+ GC +I++ G E ++++P
Sbjct: 476 DIYVKAGKYDAAKRIRNSMKE-RGIETKIP--GCSIIEINGVVQEFSVGEIPMKELP 529
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 272/460 (59%), Gaps = 43/460 (9%)
Query: 150 PDKDVVSWNVSISGHVKCMR-----FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
P + WN I HV+ + +F RMR + PD T L + +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFH-GVQPDFHTFPFLLQSFASPS 78
Query: 205 NLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
L LG+ +H I L F +D + + TS++S
Sbjct: 79 LLHLGRSVHAQI---LRF-----GLAIDPFVQ----------------------TSLISM 108
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII---RLKPDK 321
Y + G ++ AR+LF P R+++ W+ MINGYV+ ++ EA+ALFREMQ++ ++P++
Sbjct: 109 YSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 168
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
F + +L C +LGALE GKW H YI++ + VD V+ TALI+MYAKCG +EKA +F
Sbjct: 169 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 228
Query: 382 L-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
L KD +W+++I GLAM+G + + LFS+MI+ G +P+ +TF+ V AC HGGLV E
Sbjct: 229 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 288
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALL 500
G+ + MTE Y I P ++HYGC++DL GRAG + EA +++ +P E + ++ +GALL
Sbjct: 289 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLV---WGALL 345
Query: 501 SACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRK 560
S R++G+++ E L ++E +S + LL+N+YA RWEDV +VR M+ MG++K
Sbjct: 346 SGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKK 405
Query: 561 VPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
VPGCS IE+ G++HEF VGD SH E ++I+ ML+ + + L
Sbjct: 406 VPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERL 445
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 184/364 (50%), Gaps = 52/364 (14%)
Query: 56 YNLLIKAFAK-----KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV 110
+N LI+A + G + +F ++R GV PD T+PF+ ++ + G V
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 111 HGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRF 170
H +++ GL D +V S++ MY G + + LF MP+++V+SW+ I+G+V+C ++
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146
Query: 171 EDAVDVFRRMRQ-GCN-LMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMG 227
++A+ +FR M+ G N + P+E T+ L+AC L LE GK H YI++ + ++G
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLG 206
Query: 228 NALLDMYCKCGCLSEARELFDEM-PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
AL+DMY KCG + +A +F + PNK+V+ W++M+SG G E
Sbjct: 207 TALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAE-------------- 252
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
E V LF +M ++P+ +A+ C G + +GK Y
Sbjct: 253 -----------------ECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGK---DY 292
Query: 347 INENRITVD-AVVAT-----ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAM 399
+ R+T D +++ T ++++Y + G I++A + + E D W +++ G M
Sbjct: 293 L--RRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRM 350
Query: 400 NGKI 403
+G I
Sbjct: 351 HGDI 354
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
++A++ +I A G + + LFSK+ +GV P+ T+ VF A G V +G+
Sbjct: 235 VMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD--- 291
Query: 113 YVVKTGLEFDT------YVCNSIMDMYGVLGKICNVKKLFDEMP-DKDVVSWNVSISG 163
Y+ + ++ Y C ++D+YG G+I + MP + DV+ W +SG
Sbjct: 292 YLRRMTEDYSIIPTIQHYGC--MVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 347
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 298/509 (58%), Gaps = 13/509 (2%)
Query: 96 KAVGWL----GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
K V WL +K + H +++ L+ D + + + LG LF +
Sbjct: 12 KQVIWLLNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTH 71
Query: 152 K-DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
++ +N I + ++ +F R+ Q L PD + L A L + G
Sbjct: 72 PPNIFLYNTIIRALSLSPQPSLSIFLFNRI-QSARLRPDSYSFPFALKAVIRLSATKTGL 130
Query: 211 EIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVN 267
+ H + I L + +L+ MY +S+AR+LFD +P +NV W +M++ Y
Sbjct: 131 QFHSQAIRFGLHSHLHVLVSLIRMYSSSH-ISDARKLFDGIPLTARNVALWNAMLTSYAK 189
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+ A+ LFD P R+++ WTA+I+GY NR +A+A+FR MQ+ + PD+ L+A+
Sbjct: 190 ICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAV 249
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+ CAQLGALE G+WI YI+ + + + + ALI+MYAK G I++AL IF ++ K
Sbjct: 250 LSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTI 309
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
+WT++I GLA++G +ALE+FS+M KP++ITFI VLSACSH GLV R FF
Sbjct: 310 VTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTN 369
Query: 448 MTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
M Y IQPK+EHYGC+IDLLGRAG L EA++L++++P E N I +G+LL+A +G
Sbjct: 370 MRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAI---WGSLLAASYTHG 426
Query: 508 NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+ +GE+ L ++E +S + LL+NIYAS RW+ VR+ M++ GV+K+PG S I
Sbjct: 427 DAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFI 486
Query: 568 EINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
E+N ++EF+ G+ SH + EIY ++ ++
Sbjct: 487 EVNNRVNEFIAGETSHPQFDEIYEVIYKI 515
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 191/404 (47%), Gaps = 72/404 (17%)
Query: 36 GNLLYAEKIFGSI-QSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
G LYA +F S+ P + YN +I+A + S+ LF++++ + PD++++PF
Sbjct: 57 GFSLYAYSLFTSLTHPPNIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFA 116
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG-------------------- 134
KAV L K G + H ++ GL +V S++ MY
Sbjct: 117 LKAVIRLSATKTGLQFHSQAIRFGLHSHLHVLVSLIRMYSSSHISDARKLFDGIPLTARN 176
Query: 135 ---------VLGKIC---NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
KIC N + LFD MP ++++SW ISG+ R A+ +FR M Q
Sbjct: 177 VALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTM-Q 235
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGCLS 241
N++PDE T+++ LSAC L LELG+ I YI+ L + NAL+DMY K G +
Sbjct: 236 LQNVVPDEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIK 295
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
A +F+ M +K ++ WT+M++G G +A ++F R
Sbjct: 296 RALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSR--------------------- 334
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN-ENRITVDAVVAT 360
M+ R+KP++ +A+L+ C+ +G ++ + + N +R T+ +
Sbjct: 335 ----------MERDRVKPNEITFIAVLSACSHVGLVQLARSF--FTNMRSRYTIQPKIEH 382
Query: 361 --ALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNG 401
+I++ + G +++A ++ ++ E +AA W S++ +G
Sbjct: 383 YGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHG 426
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 333/631 (52%), Gaps = 72/631 (11%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL---LAYNLLIKAFAKKGSFRK 71
G + N N L+ + G+L A +F I + +++N ++ A K + R
Sbjct: 179 GFESNVFVCNALVAM--YSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRT 236
Query: 72 SLLLFSKL----RERGVS--PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+L LFS++ E+ + D + + A L + + +++H Y ++ G D +V
Sbjct: 237 ALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFV 296
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ--- 182
CN+++D Y G + + K+F+ M KDVVSWN ++G+ + F A ++F MR+
Sbjct: 297 CNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENI 356
Query: 183 -----------------GCNLM--------------PDEGTVVSTLSACTALKNLELGKE 211
GC+ P+ T++S LSAC +L L G E
Sbjct: 357 PLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGME 416
Query: 212 IHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
IH Y + KC LS + + ++++ + +++ Y C
Sbjct: 417 IHAYSLK-----------------KC-LLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSF 458
Query: 272 EKARDLFDRSPVRD--IVLWTAMINGYVQFNRFDEAVALFREM--QIIRLKPDKFILVAL 327
+ AR +FD P R+ +V WT MI GY Q+ ++A+ +F EM + + P+ + + +
Sbjct: 459 KAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCI 518
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAV--VATALIEMYAKCGLIEKALEIFYELREK 385
L CA L AL GK IH Y+ + +V VA LI+MY+KCG ++ A +F + ++
Sbjct: 519 LMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR 578
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ SWTS++ G M+G+ +AL++F +M G PDDI+F+ +L ACSH G+VD+G +F
Sbjct: 579 NEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYF 638
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
+ M Y + EHY C+IDLL R G LD+A + I+++P E + +I + ALLSACR+
Sbjct: 639 DIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVI---WVALLSACRV 695
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+ NV++ E L +++++ +TL++NIYA+A RW+DV +RQ MK+ G++K PGCS
Sbjct: 696 HSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCS 755
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
++ F VGD SH EIYS+L+R+
Sbjct: 756 WVQGKKGTASFFVGDRSHPLSPEIYSLLERL 786
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 150/464 (32%), Positives = 243/464 (52%), Gaps = 32/464 (6%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+NLL++ K+G +++ + ++ G PD+FT P+ KA G L G +HG +
Sbjct: 117 WNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLIC 176
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK---DVVSWNVSISGHVKCMRFED 172
G E + +VCN+++ MY G + + +FDE+ K DV+SWN ++ HVK
Sbjct: 177 CNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRT 236
Query: 173 AVDVFRRM-----RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT-PIM 226
A+++F M + N D ++V+ L AC +LK L KEIH Y + F +
Sbjct: 237 ALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFV 296
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS----- 281
NAL+D Y KCG +++A ++F+ M K+V+ W +MV+GY G A +LF+
Sbjct: 297 CNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENI 356
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P+ D++ W+A+I GY Q EA+ F++M + +P+ +++LL+ CA LGAL QG
Sbjct: 357 PL-DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGM 415
Query: 342 WIHGY------------INENRITVDAVVATALIEMYAKCGLIEKALEIFYEL--REKDA 387
IH Y + D +V ALI+MY+KC + A IF + RE++
Sbjct: 416 EIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNV 475
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISG--GAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+WT +I G A G N AL++FS+MIS P+ T +L AC+H + G++
Sbjct: 476 VTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIH 535
Query: 446 NTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAEELIRKIPNEN 488
+T ++ +P + CLID+ + G +D A + +P N
Sbjct: 536 AYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRN 579
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 171/438 (39%), Gaps = 92/438 (21%)
Query: 111 HGYV----VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
H YV + TG+ C + D VL ++ V WN+ + H+K
Sbjct: 77 HSYVSPKSLGTGVVASYLACGATKDALSVLERV----------TPSPAVWWNLLVREHIK 126
Query: 167 CMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
+ A+ V RM R G PD T+ L AC L + G+ +H I E
Sbjct: 127 EGHLDRAIGVSCRMLRAGTK--PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNV 184
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNK---NVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ NAL+ MY +CG L +A +FDE+ K +VI W S+V+ +V A +LF
Sbjct: 185 FVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSE- 243
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
+++ + + D +V +L CA L AL Q K
Sbjct: 244 ------------------------MSMIVHEKATNERSDIISIVNILPACASLKALPQIK 279
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF---------------------- 379
IH Y N DA V ALI+ YAKCG + A+++F
Sbjct: 280 EIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSG 339
Query: 380 -----YELREK--------DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
+EL E D +W+++I G A G +AL+ F QMI G++P+ +T I
Sbjct: 340 NFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTII 399
Query: 427 GVLSACSHGGLVDEGRRF-----------FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
+LSAC+ G + +G + L Y LID+ +
Sbjct: 400 SLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFK 459
Query: 476 EAEELIRKIPNENNEIIV 493
A + IP ++
Sbjct: 460 AARSIFDSIPRRERNVVT 477
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 297/539 (55%), Gaps = 45/539 (8%)
Query: 102 GEVKK-GEKVHGYVVKTGLEFDTYVCNSIMDMYGVL------------------------ 136
G+V++ G VH +VKT L T + N ++ +Y +L
Sbjct: 42 GDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSL 101
Query: 137 --------GKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
G + + +L D MP ++VVS+N IS + R +A+ VF ++ + L
Sbjct: 102 LAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGL 161
Query: 187 -----MPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCL 240
D TVVS SAC L++ +E+H + +E T IM NA++D Y K G +
Sbjct: 162 GQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRV 221
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR LFD+M ++ + WTSM++GY L+ A +FD P +D + WTA+I+G+ Q
Sbjct: 222 EDARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNG 281
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD---AV 357
+ A+ LF M + P F LV+ L CA++G + +GK +HG+I I D
Sbjct: 282 EEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVF 341
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ALI+MY+KCG + A+ +F + E+D SW S++ G + NG+ ++L +F +M+
Sbjct: 342 IHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDE 401
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P +TF+ VL+ACSH GLV +GRR +M + + ++P+ EHY ID LGR L+EA
Sbjct: 402 VQPTYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNHQLEEA 460
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
E I+ + ++ +GALL AC ++GN+++ E++A L ++E ++S + +L+NIY
Sbjct: 461 SEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIY 520
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
++A +W+D VR MK G+RK S IE+ H F+ D SH E EIY MLD++
Sbjct: 521 SAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKL 579
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 193/439 (43%), Gaps = 78/439 (17%)
Query: 17 QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYNLLIKAFAKKGSFRKSLL 74
+N + N L+ G L A ++ + S +++YN +I + A+ G ++L
Sbjct: 92 HKNAHSYNSLLAALAR-GRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALR 150
Query: 75 LFSKL-RERG-----VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
+F++L R+RG V+ D FT A L + + ++HG VV +G+E + N+
Sbjct: 151 VFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANA 210
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-------- 180
++D Y G++ + + LFD+M +D VSW I+G+ + +DAV VF M
Sbjct: 211 MVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAW 270
Query: 181 ----------------------RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
G ++P +VS L AC + + GKE+H +I +
Sbjct: 271 TALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILR 330
Query: 219 EL----EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
F + NAL+DMY KCG + A +FD M +++I W SMV+G+ + GQ +++
Sbjct: 331 RSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQS 390
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+F+R M+ VQ P +A+LT C+
Sbjct: 391 LAVFER-----------MLKDEVQ--------------------PTYVTFLAVLTACSHA 419
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK----DAASW 390
G + G+ I + ++ + A A I+ + +E+A E L K SW
Sbjct: 420 GLVSDGRRILESMQDHGVEPRAEHYAAFIDALGRNHQLEEASEFIKGLSSKIGLGTTGSW 479
Query: 391 TSIICGLAMNGKINKALEL 409
+++ ++G I A E+
Sbjct: 480 GALLGACHVHGNIEIAEEV 498
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 320/568 (56%), Gaps = 47/568 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L QI A+I + GL+Q+ + L + + + S +L Y+ +F + SP +N LIK
Sbjct: 25 HLNQIHARIIRKGLEQD-QNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKG 83
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
++ K F +++ + ++ G++ PD +T+P V K G+V+ G VHG V++ G +
Sbjct: 84 YSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDK 143
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D V S +D YG + + +K+F EMP+++ VSW + +VK E+A +F
Sbjct: 144 DVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF---- 199
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+LMP+ LG NAL+D K G L
Sbjct: 200 ---DLMPERN----------------LGS----------------WNALVDGLVKSGDLV 224
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
A++LFDEMP +++I +TSM+ GY G + ARDLF+ + D+ W+A+I GY Q +
Sbjct: 225 NAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQ 284
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE--NRITVDAVVA 359
+EA +F EM +KPD+FI+V L++ C+Q+G E + + Y+++ N+ + VV
Sbjct: 285 PNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP 344
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI+M AKCG +++A ++F E+ ++D S+ S++ G+A++G ++A+ LF +M+ G
Sbjct: 345 -ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIV 403
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD++ F +L C LV+EG R+F M + Y I +HY C+++LL R G L EA E
Sbjct: 404 PDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYE 463
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI+ +P E + +G+LL C ++GN ++ E +A L ++E + + + LL+NIYA+
Sbjct: 464 LIKSMPFEAH---ASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAA 520
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+RW DV ++R KM E G+ K+ G S I
Sbjct: 521 LDRWTDVAHLRDKMNENGITKICGRSWI 548
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 290/524 (55%), Gaps = 39/524 (7%)
Query: 109 KVHGY---VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++HG ++KT D ++ + + L + F +M + +V +N I G V
Sbjct: 54 ELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFV 113
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
C A+ + M + N++P T S + ACT + +ELG+ +H +I + E
Sbjct: 114 YCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHL 173
Query: 225 IMGNALLDMYCKCGCLSEARELFDEM-------------------------------PNK 253
+ AL+D Y K LSEAR++FDEM P +
Sbjct: 174 FVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPER 233
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
N W +M+ GY G +E A LF++ P +DI+ WT MI Y Q ++ +A+A++ EM+
Sbjct: 234 NTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMR 293
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+ + PD+ + + + CA +GALE GK IH Y+ + +D + +AL++MYAKCG ++
Sbjct: 294 LNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLD 353
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+L IF++L +K+ W ++I GLA++G KAL +F+ M P+ +TFI +LSAC+
Sbjct: 354 LSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACT 413
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H GLVDEGR F +MT Y I+P + HYGC++D+L ++G L+EA ELI+ + E N II
Sbjct: 414 HAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSII- 472
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+GALL+ C+++GN ++ E L +E +S + LL ++YA W +V ++R M
Sbjct: 473 --WGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMM 530
Query: 554 KEMGV-RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
KE GV +K PG S IE+ G IH+F SH + +IY +L +
Sbjct: 531 KEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFILTEL 574
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 191/438 (43%), Gaps = 102/438 (23%)
Query: 45 FGSIQSPCLLAYNLLIKAFAKKG-SFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
F +++P + YN +IK F G FR L E V P ++T+ + KA ++
Sbjct: 94 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 153
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE--------------- 148
V+ G+ VH ++ K G E +V +++D Y L + +K+FDE
Sbjct: 154 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSA 213
Query: 149 ----------------MPDKDVVSWNVSISGHVKCMRFE--------------------- 171
MP+++ +WN I G+ + E
Sbjct: 214 LARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMI 273
Query: 172 ----------DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQEL 220
DA+ ++ MR ++PDE T+ + SAC + LELGKEIH Y+ +Q L
Sbjct: 274 TCYSQNKQYQDALAIYSEMRLN-GIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGL 332
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+G+AL+DMY KCG L + +F ++ +KN+ CW +++ G
Sbjct: 333 NLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLA-------------- 378
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
++GY + +A+ +F M+ ++ P+ +++L+ C G +++G
Sbjct: 379 ------------VHGYAE-----KALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEG 421
Query: 341 KWIHGYINENR---ITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICG 396
+ +++ R I D +++M +K G + +ALE+ + E ++ W +++ G
Sbjct: 422 R--SRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNG 479
Query: 397 LAMNGKINKALELFSQMI 414
++G A + Q++
Sbjct: 480 CKLHGNCEIAEDAVEQLM 497
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 142/274 (51%), Gaps = 6/274 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F+ ++N T N ++ T GN+ AE +F + + ++++ +I +++ +
Sbjct: 225 KLFEEMPERNTATWNTMIDGYTRL--GNVESAELLFNQMPTKDIISWTTMITCYSQNKQY 282
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+ +L ++S++R G+ PD T V A +G ++ G+++H YV+ GL D Y+ +++
Sbjct: 283 QDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSAL 342
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY G + +F ++ DK++ WN I G E A+ +F M + +MP+
Sbjct: 343 VDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMERE-KIMPN 401
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELF 247
T +S LSACT ++ G+ + ++ + P + + ++DM K G L+EA EL
Sbjct: 402 GVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELI 461
Query: 248 DEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDR 280
M N I W ++++G G E A D ++
Sbjct: 462 KSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQ 495
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 314/559 (56%), Gaps = 18/559 (3%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
N+ A+ +F + ++ +YN +I ++++ K+LLLF +L G+ D + VF+
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A + + +G +++G +K+ L D V N+ +DMYG + ++FDEM +D VS
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 450
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN I+ H + + + + +F M + + PDE T S L ACT +L G EIH I
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 508
Query: 217 NQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ + +G +L+DMY KCG + EA ++ + + G +E+
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELE 557
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+ ++ V W ++I+GYV + ++A LF M + + PDKF +L CA L
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
+ GK IH + + + D + + L++MY+KCG + + +F + +D +W ++IC
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A +GK +A++LF +MI KP+ +TFI +L AC+H GL+D+G +F M Y +
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY-GNVDMGEK 514
P+L HY ++D+LG++G + A ELIR++P E +++I + LL C I+ NV++ E+
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVI---WRTLLGVCTIHRNNVEVAEE 794
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
A L +++ +DSS +TLL+N+YA A WE V+++R+ M+ ++K PGCS +E+ +H
Sbjct: 795 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELH 854
Query: 575 EFLVGDPSHSEMKEIYSML 593
FLVGD +H +EIY L
Sbjct: 855 VFLVGDKAHPRWEEIYEEL 873
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 242/529 (45%), Gaps = 55/529 (10%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ ++ A F + ++++N ++ + + G KS+ +F + G+ D T+
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ K +L + G ++HG VV+ G + D ++++DMY + ++F +P+
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K+ VSW+ I+G V+ A+ F+ M Q N + S L +C AL L LG +
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEM-QKVNAGVSQSIYASVLRSCAALSELRLGGQ 302
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H + + + I+ A LDMY KC
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCD-------------------------------N 331
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
++ A+ LFD S + + AMI GY Q +A+ LF + L D+ L +
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA + L +G I+G ++ +++D VA A I+MY KC + +A +F E+R +DA SW
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+II NGK + L LF M+ +PD+ TF +L AC+ GG + G +++
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-- 508
Query: 451 VYQIQPKLEHYGC-LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
V GC LID+ + G+++EAE++ + N + G +
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN---------------VSGTM 553
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+ EK+ ++++ S++++++ Y + ED + +M EMG+
Sbjct: 554 EELEKMHN--KRLQEMCVSWNSIISG-YVMKEQSEDAQMLFTRMMEMGI 599
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 203/477 (42%), Gaps = 81/477 (16%)
Query: 61 KAFAKKGSFRK--SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ +K S+R+ S F+ + S + FVFK G ++ G++ H +++ +G
Sbjct: 19 RCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISG 78
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC----------- 167
T+V N ++ +Y + +FD+MP +DVVSWN I+G+ K
Sbjct: 79 FRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFN 138
Query: 168 -MRFED-------------------AVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNL 206
M D +++VF M R+G D T L C+ L++
Sbjct: 139 MMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF--DGRTFAIILKVCSFLEDT 196
Query: 207 ELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
LG +IH + + + + +ALLDMY K E+ +F +P KN + W
Sbjct: 197 SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW------- 249
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
+A+I G VQ N A+ F+EMQ + + I
Sbjct: 250 ------------------------SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L CA L L G +H + ++ D +V TA ++MYAKC ++ A +F
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ S+ ++I G + KAL LF +++S G D+I+ GV AC+ + EG + +
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 446 NTMTEVYQIQPKLEHYGCL----IDLLGRAGLLDEA----EELIRKIPNENNEIIVP 494
I+ L C+ ID+ G+ L EA +E+ R+ N II
Sbjct: 406 GL-----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 314/559 (56%), Gaps = 18/559 (3%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
N+ A+ +F + ++ +YN +I ++++ K+LLLF +L G+ D + VF+
Sbjct: 289 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 348
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A + + +G +++G +K+ L D V N+ +DMYG + ++FDEM +D VS
Sbjct: 349 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 408
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN I+ H + + + + +F M + + PDE T S L ACT +L G EIH I
Sbjct: 409 WNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 466
Query: 217 NQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ + +G +L+DMY KCG + EA ++ + + G +E+
Sbjct: 467 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELE 515
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+ ++ V W ++I+GYV + ++A LF M + + PDKF +L CA L
Sbjct: 516 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 575
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
+ GK IH + + + D + + L++MY+KCG + + +F + +D +W ++IC
Sbjct: 576 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 635
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A +GK +A++LF +MI KP+ +TFI +L AC+H GL+D+G +F M Y +
Sbjct: 636 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 695
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY-GNVDMGEK 514
P+L HY ++D+LG++G + A ELIR++P E +++I + LL C I+ NV++ E+
Sbjct: 696 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVI---WRTLLGVCTIHRNNVEVAEE 752
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
A L +++ +DSS +TLL+N+YA A WE V+++R+ M+ ++K PGCS +E+ +H
Sbjct: 753 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELH 812
Query: 575 EFLVGDPSHSEMKEIYSML 593
FLVGD +H +EIY L
Sbjct: 813 VFLVGDKAHPRWEEIYEEL 831
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 242/529 (45%), Gaps = 55/529 (10%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ ++ A F + ++++N ++ + + G KS+ +F + G+ D T+
Sbjct: 82 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 141
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ K +L + G ++HG VV+ G + D ++++DMY + ++F +P+
Sbjct: 142 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 201
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K+ VSW+ I+G V+ A+ F+ M Q N + S L +C AL L LG +
Sbjct: 202 KNSVSWSAIIAGCVQNNLLSLALKFFKEM-QKVNAGVSQSIYASVLRSCAALSELRLGGQ 260
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H + + + I+ A LDMY KC
Sbjct: 261 LHAHALKSDFAADGIVRTATLDMYAKCD-------------------------------N 289
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
++ A+ LFD S + + AMI GY Q +A+ LF + L D+ L +
Sbjct: 290 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 349
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA + L +G I+G ++ +++D VA A I+MY KC + +A +F E+R +DA SW
Sbjct: 350 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 409
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+II NGK + L LF M+ +PD+ TF +L AC+ GG + G +++
Sbjct: 410 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-- 466
Query: 451 VYQIQPKLEHYGC-LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
V GC LID+ + G+++EAE++ + N + G +
Sbjct: 467 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN---------------VSGTM 511
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+ EK+ ++++ S++++++ Y + ED + +M EMG+
Sbjct: 512 EELEKMHN--KRLQEMCVSWNSIISG-YVMKEQSEDAQMLFTRMMEMGI 557
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 186/434 (42%), Gaps = 79/434 (18%)
Query: 102 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
G ++ G++ H +++ +G T+V N ++ +Y + +FD+MP +DVVSWN I
Sbjct: 20 GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMI 79
Query: 162 SGHVKC------------MRFED-------------------AVDVFRRM-RQGCNLMPD 189
+G+ K M D +++VF M R+G D
Sbjct: 80 NGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF--D 137
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFD 248
T L C+ L++ LG +IH + + + + +ALLDMY K E+ +F
Sbjct: 138 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 197
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+P KN + W +A+I G VQ N A+
Sbjct: 198 GIPEKNSVSW-------------------------------SAIIAGCVQNNLLSLALKF 226
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F+EMQ + + I ++L CA L L G +H + ++ D +V TA ++MYAK
Sbjct: 227 FKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK 286
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
C ++ A +F + S+ ++I G + KAL LF +++S G D+I+ GV
Sbjct: 287 CDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 346
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL----IDLLGRAGLLDEA----EEL 480
AC+ + EG + + I+ L C+ ID+ G+ L EA +E+
Sbjct: 347 FRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 401
Query: 481 IRKIPNENNEIIVP 494
R+ N II
Sbjct: 402 RRRDAVSWNAIIAA 415
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Query: 200 CTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
C LELGK+ H + I T + N LL +Y A +FD+MP ++V+ W
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
M++GY + KA F+ PVRD+V W +M++GY+Q +++ +F +M ++
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
D +L C+ L G IHG + D V A+AL++MYAK ++L +
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
F + EK++ SW++II G N ++ AL+ F +M A + VL +C+
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/514 (35%), Positives = 293/514 (57%), Gaps = 39/514 (7%)
Query: 79 LRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDMYGVL 136
L +RG + PD Y + K LG+V++G VH ++V + L+ + N I++MY
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVST 196
G + + +++FDEMP KD+V+W I+G + R DA+ +F +M + P+ T+ S
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR-LGFQPNHFTLSSL 195
Query: 197 LSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L A + L+ G ++H + + + + +G+AL+DMY +CG + A+ FD MP K+
Sbjct: 196 LKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE 255
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
+ W +++SG+ G+ E A L LW +MQ
Sbjct: 256 VSWNALISGHARKGEGEHALHL----------LW---------------------KMQRK 284
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
+P F ++L+ CA +GALEQGKW+H ++ ++ + + A + L++MYAK G I+ A
Sbjct: 285 NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F L + D SW +++ G A +G + L+ F QM+ G +P++I+F+ VL+ACSH
Sbjct: 345 KRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHS 404
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
GL+DEG +F M + Y+++P + HY +DLLGR GLLD AE IR++P E +
Sbjct: 405 GLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAV--- 460
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
+GALL ACR++ N+++G A +++ DS LL+NIYASA RW DV VR+ MKE
Sbjct: 461 WGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKE 520
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
GV+K P CS +EI +H F+ D +H +KEI
Sbjct: 521 SGVKKQPACSWVEIENAVHLFVANDETHPRIKEI 554
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 175/362 (48%), Gaps = 34/362 (9%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + + ++ + LI F++ R +LLLF ++ G P++FT + KA G
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS 201
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ G ++H + +K G + YV ++++DMY G + + FD MP K VSWN
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNAL 261
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
ISGH + E A+ + +M Q N P T S LSAC ++ LE GK +H + I
Sbjct: 262 ISGHARKGEGEHALHLLWKM-QRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSG 320
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
L+ +GN LLDMY K G + +A+ +FD + +V+ W +M++G C Q ++ D
Sbjct: 321 LKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTG---CAQHGLGKETLD 377
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
R F +M I ++P++ + +LT C+ G L++
Sbjct: 378 R----------------------------FEQMLRIGIEPNEISFLCVLTACSHSGLLDE 409
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLA 398
G + + + ++ D +++ + GL+++A E+ E AA W +++
Sbjct: 410 GLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACR 469
Query: 399 MN 400
M+
Sbjct: 470 MH 471
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 116/218 (53%), Gaps = 4/218 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A+ F + + +++N LI A+KG +L L K++ + P +FTY V
Sbjct: 238 GHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVL 297
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +G +++G+ VH +++K+GL+ ++ N+++DMY G I + K++FD + DVV
Sbjct: 298 SACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVV 357
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN ++G + ++ +D F +M + + P+E + + L+AC+ L+ G
Sbjct: 358 SWNTMLTGCAQHGLGKETLDRFEQMLR-IGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
+ ++ + P + + +D+ + G L A EMP
Sbjct: 417 M-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP 453
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/514 (35%), Positives = 294/514 (57%), Gaps = 39/514 (7%)
Query: 79 LRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDMYGVL 136
L +RG + PD Y + K LG+V++G VH ++V + L+ + N I++MY
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVST 196
G + + +++FDEMP KD+V+W I+G + R DA+ +F +M + L P+ T+ S
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR-LGLQPNHFTLSSL 195
Query: 197 LSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
L A + L+ G ++H + + + + +G+AL+DMY +CG + A+ FD MP K+
Sbjct: 196 LKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE 255
Query: 256 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
+ W +++SG+ G+ E A L LW +MQ
Sbjct: 256 VSWNALISGHARKGEGEHALHL----------LW---------------------KMQRK 284
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
+P F ++ + CA +GALEQGKW+H ++ ++ + + A + L++MYAK G I+ A
Sbjct: 285 NFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F L + D SW +++ G A +G + L+ F QM+ G +P++I+F+ VL+ACSH
Sbjct: 345 KRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHS 404
Query: 436 GLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPL 495
GL+DEG +F M + Y+++P + HY +DLLGR GLLD AE IR++P E +
Sbjct: 405 GLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAV--- 460
Query: 496 YGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
+GALL ACR++ N+++G A +++ DS LL+NIYASA RW DV VR+ MKE
Sbjct: 461 WGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKE 520
Query: 556 MGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
GV+K P CS +EI +H F+ D +H ++KEI
Sbjct: 521 SGVKKQPACSWVEIENAVHLFVANDETHPQIKEI 554
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 178/367 (48%), Gaps = 34/367 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A ++F + + ++ + LI F++ R +LLLF ++ G+ P++FT +
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA G + G ++H + +K G + YV ++++DMY G + + FD MP K V
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN ISGH + E A+ + +M++ N P T S SAC ++ LE GK +H +
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRK-NFQPTHFTYSSVFSACASIGALEQGKWVHAH 315
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I L+ +GN LLDMY K G + +A+ +FD + +V+ W +M++G C Q
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTG---CAQHGLG 372
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
++ DR F +M I ++P++ + +LT C+
Sbjct: 373 KETLDR----------------------------FEQMLRIGIEPNEISFLCVLTACSHS 404
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSI 393
G L++G + + + ++ D +++ + GL+++A E+ E AA W ++
Sbjct: 405 GLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL 464
Query: 394 ICGLAMN 400
+ M+
Sbjct: 465 LGACRMH 471
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/489 (35%), Positives = 283/489 (57%), Gaps = 40/489 (8%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK---ICNVKKLFDEMPDKDVVSWNVSISGH 164
++ H +++KTGL DT+ + ++ + + + + + + + N I +
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH----------- 213
E A+ VFR M G + PD+ + L AC A E G++IH
Sbjct: 116 ANSSTPEVALTVFREMLLG-PVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTD 174
Query: 214 -----------------RYINQELEFTPIMG----NALLDMYCKCGCLSEARELFDEMPN 252
+ L+ P+ N+LL Y + G + EAR LFDEM
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEE 234
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
+NV W M+SGY G +++A+++FD PVRD+V W AM+ Y ++E + +F +M
Sbjct: 235 RNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Query: 313 -QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
KPD F LV++L+ CA LG+L QG+W+H YI+++ I ++ +ATAL++MY+KCG
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGK 354
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
I+KALE+F ++D ++W SII L+++G ALE+FS+M+ G KP+ ITFIGVLSA
Sbjct: 355 IDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
C+H G++D+ R+ F M+ VY+++P +EHYGC++DLLGR G ++EAEEL+ +IP + I
Sbjct: 415 CNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASI 474
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
++ +LL AC+ +G ++ E++A L ++ +DSS + ++N+YAS RWE V + R+
Sbjct: 475 LLE---SLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRR 531
Query: 552 KMKEMGVRK 560
M+ V +
Sbjct: 532 NMRAERVNR 540
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 214/515 (41%), Gaps = 128/515 (24%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFC-THPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+T+++Q A + + GL + + +KL+ F T+P + YA I I SP +N +
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+A+A + +L +F ++ V PD +++ FV KA ++G ++HG +K+GL
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV------------------------ 155
D +V N+++++YG G +K+ D MP +D V
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 156 -------SWNVSISGHVKCMRFEDAVDVFRRM----------------RQGC-------- 184
SWN ISG+ ++A +VF M GC
Sbjct: 232 MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Query: 185 NLMPDEG-------TVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCK 236
N M D+ T+VS LSAC +L +L G+ +H YI++ +E + AL+DMY K
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK 351
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG + +A E+F ++V W S++S DL +D
Sbjct: 352 CGKIDKALEVFRATSKRDVSTWNSIIS------------DLSVHGLGKD----------- 388
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
A+ +F EM KP+ + +L+ C +G L+Q
Sbjct: 389 --------ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQ----------------- 423
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
A L EM + +E +E + ++ L GKI +A EL +++ +
Sbjct: 424 --ARKLFEMMSSVYRVEPTIE-----------HYGCMVDLLGRMGKIEEAEELVNEIPAD 470
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
A I +L AC G +++ R N + E+
Sbjct: 471 EAS---ILLESLLGACKRFGQLEQAERIANRLLEL 502
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/467 (38%), Positives = 280/467 (59%), Gaps = 16/467 (3%)
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
++KL ++ + +VSW I+ + R +A F MR + P+ T +S LSAC
Sbjct: 22 IQKL-NQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLA-GIEPNHITFISLLSAC- 78
Query: 202 ALKNLELGKE-----IHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKN 254
N G E +H Y + L+ + +M G A+L MY K G + +AR +FD M +KN
Sbjct: 79 --GNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKN 136
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
+ W +M+ GY+ GQ++ A +FD P RD++ WTAMI G+V+ +EA+A FREMQI
Sbjct: 137 SVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQI 196
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ PD ++A L C LGAL G W H Y+ + V+ +LI++Y +CG +E
Sbjct: 197 SGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEF 256
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
A ++F + ++ SW S+I G A NG N++L F +M G KPD +TF G L+ACSH
Sbjct: 257 ARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSH 316
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP 494
GLV+EG ++F M Y+I P++EH+GCL+DL RAG L++A +++ +P + NE+++
Sbjct: 317 VGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVI- 375
Query: 495 LYGALLSACRIYGN-VDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
G+LL+ACR +GN + E+L + ++ K S + +L+N+YA+ +WE + +R+KM
Sbjct: 376 --GSLLAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKM 433
Query: 554 KEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
K +G++K PG SSIEI+ H F+ GD +H E I +L+ ++ L
Sbjct: 434 KGLGLKKQPGYSSIEIDDYTHVFMAGDNAHVETAYIREVLEVISYDL 480
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 68/365 (18%)
Query: 50 SPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWL--GEVKKG 107
S ++++ I ++ ++ FS +R G+ P++ T+ + A G G
Sbjct: 30 SETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGSEALS 89
Query: 108 EKVHGYVVKTGLE--------------------------FD------TYVCNSIMDMYGV 135
+ +HGY K GL+ FD + N+++D Y
Sbjct: 90 DLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMR 149
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
G++ N K+FDEMP++D++SW I+G VK E+A+ FR M Q + PD +++
Sbjct: 150 NGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREM-QISGVNPDYVAIIA 208
Query: 196 TLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKN 254
L+ACT L L G HRY ++Q+ + N+L+D+YC+CGC+ AR++FD M +
Sbjct: 209 ALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRT 268
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
V+ W S++ G+ G +E++ FR+MQ
Sbjct: 269 VVSWNSVIVGFAANGNA-------------------------------NESLVYFRKMQE 297
Query: 315 IRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
KPD LT C+ +G +E+G ++ + RI+ L+++Y++ G +E
Sbjct: 298 EGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLE 357
Query: 374 KALEI 378
A+++
Sbjct: 358 DAIKV 362
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G + A K+F + L+++ +I F KKG ++L F +++ GV+PD
Sbjct: 150 NGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAA 209
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A LG + G H YVV + V NS++D+Y G + +++FD M + V
Sbjct: 210 LAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTV 269
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
VSWN I G +++ FR+M++ PD T L+AC+ + +E G + +
Sbjct: 270 VSWNSVIVGFAANGNANESLVYFRKMQEE-GFKPDAVTFTGALTACSHVGLVEEGFQYFQ 328
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQ- 270
+ + +P + + L+D+Y + G L +A ++ + MP K N + S+++ N G
Sbjct: 329 MMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLLAACRNHGNH 388
Query: 271 ---LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
E+ V+ + + N Y +++ A + R+M+ + LK
Sbjct: 389 TILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 439
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 299/504 (59%), Gaps = 22/504 (4%)
Query: 104 VKKGEKVHGYVVKTGLEFD--TYVCNSIMDMYGVLGKICNVKKLFDEMPD--KDVVSWNV 159
V+ GE++H +GL F +++ N+++ +Y + +KLFD +P KD V +
Sbjct: 28 VRPGEQLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLFDRIPHSHKDSVDYTA 87
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQ 218
I +C DA+ + +MRQ +P +G ++ L AC+ L + L ++H + +
Sbjct: 88 LI----RCSHPLDALRFYLQMRQ--RALPLDGVALICALGACSKLGDSNLVPQMHVGVVK 141
Query: 219 E--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
L T ++ N ++D Y KCG + EAR +F+E+ +V+ WT ++ G V C +E +
Sbjct: 142 FGFLRHTKVL-NGVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKCEGVESGKV 200
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI---IRLKPDKFILVALLTGCAQ 333
+FD P R+ V WT +I GYV EA L +EM + L ++L+ C+Q
Sbjct: 201 VFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQ 260
Query: 334 LGALEQGKWIHGY-INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
G + G+W+H Y + + +V T+L++MYAKCG I AL +F + ++ +W +
Sbjct: 261 SGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMPRRNVVAWNA 320
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
++CGLAM+G +E+F+ M+ KPD +TF+ +LS+CSH GLV++G ++F+ + Y
Sbjct: 321 MLCGLAMHGMGKVVVEMFACMVEE-VKPDAVTFMALLSSCSHSGLVEQGWQYFHDLERAY 379
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
I+P++EHY C++DLLGRAG L+EAE+L++K+P NE+++ G+LL AC +G + +G
Sbjct: 380 GIRPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPPNEVVL---GSLLGACYAHGKLRLG 436
Query: 513 EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGI 572
EK+ L +++ ++ +H LL+N+YA + + ++R+ +K G+RKVPG SSI ++G
Sbjct: 437 EKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRKVLKNRGIRKVPGMSSIYVDGQ 496
Query: 573 IHEFLVGDPSHSEMKEIYSMLDRM 596
+H F+ GD SH +IY LD M
Sbjct: 497 LHRFIAGDKSHPRTADIYMKLDDM 520
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 125/534 (23%), Positives = 215/534 (40%), Gaps = 124/534 (23%)
Query: 5 KQIQAQIFQIGLQQNPET--LNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+Q+ A GL +P + LN L+ C PSH L+ ++I S + + Y L
Sbjct: 32 EQLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLF-DRIPHSHKDS--VDYTAL 88
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ + R + ++R+R + D A LG+ ++H VVK G
Sbjct: 89 IRCSHPLDALR----FYLQMRQRALPLDGVALICALGACSKLGDSNLVPQMHVGVVKFGF 144
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
T V N +MD Y G + +++F+E+ + VVSW V + G VKC E VF
Sbjct: 145 LRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKCEGVESGKVVFDE 204
Query: 180 MRQ-------------------------------GC--NLMPDEGTVVSTLSACTALKNL 206
M + GC + T+ S LSAC+ ++
Sbjct: 205 MPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDV 264
Query: 207 ELGKEIHRYINQEL--EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+G+ +H Y + + + ++G +L+DMY KCG +S A +F MP +NV+ W +M+ G
Sbjct: 265 SVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMPRRNVVAWNAMLCG 324
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
G + ++F M+ +KPD
Sbjct: 325 LAMHGMGKVVVEMF-----------ACMVE---------------------EVKPDAVTF 352
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+ALL+ C+ G +EQG W Y ++ +E+A I E+
Sbjct: 353 MALLSSCSHSGLVEQG-W--QYFHD----------------------LERAYGIRPEIEH 387
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
+ ++ L G++ +A +L ++ P+++ +L AC G + G +
Sbjct: 388 -----YACMVDLLGRAGRLEEAEDLVKKL---PIPPNEVVLGSLLGACYAHGKLRLGEKI 439
Query: 445 FNTMTEVYQIQP-KLEHYGCLIDLLGRAGLLDEAEEL--------IRKIPNENN 489
M E+ Q+ P E++ L ++ G D+A L IRK+P ++
Sbjct: 440 ---MRELVQMDPLNTEYHILLSNMYALCGKADKANSLRKVLKNRGIRKVPGMSS 490
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 277/491 (56%), Gaps = 8/491 (1%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+K+H ++K GL + N++++ YG G I + +LFD +P +D V+W ++
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL--GKEIH-RYINQELEFT 223
R A+ + R + PD S + AC L L + GK++H R+
Sbjct: 82 SNRPHRALSISRSL-LSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
++ ++L+DMY K G R +FD + + N I WT+M+SGY G+ +A LF ++P
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK-PDKFILVALLTGCAQLGALEQGKW 342
R++ WTA+I+G VQ +A LF EM+ + D +L +++ CA L E GK
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQ 260
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+HG + ++ ALI+MYAKC + A IF E+ KD SWTSII G A +G+
Sbjct: 261 MHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+AL L+ +M+ G KP+++TF+G++ ACSH GLV +GR F TM E + I P L+HY
Sbjct: 321 AEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYT 380
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
CL+DL R+G LDEAE LIR +P +E P + ALLS+C+ +GN M ++A L +
Sbjct: 381 CLLDLFSRSGHLDEAENLIRTMPVNPDE---PTWAALLSSCKRHGNTQMAVRIADHLLNL 437
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
+ +D S + LL+NIYA A WEDV+ VR+ M + +K PG S I++ H F G+ S
Sbjct: 438 KPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETS 497
Query: 583 HSEMKEIYSML 593
H EI ++
Sbjct: 498 HPMRDEIIGLM 508
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 201/462 (43%), Gaps = 71/462 (15%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ AQI + GL Q+ N L+ + G + A ++F ++ +A+ L+ A
Sbjct: 23 KKLHAQIIKAGLNQHEPIPNTLL--NAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG--EVKKGEKVHGYVVKTGLEFD 122
++L + L G PD+F + + KA LG VK+G++VH + D
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR-FE---------- 171
V +S++DMY G + +FD + + +SW ISG+ + R FE
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200
Query: 172 --------------------DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
DA +F MR + D + S + AC L ELGK+
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQ 260
Query: 212 IHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H I E + NAL+DMY KC L A+ +F EM K+V+ WTS++ G GQ
Sbjct: 261 MHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
E EA+AL+ EM + +KP++ V L+
Sbjct: 321 AE-------------------------------EALALYDEMVLAGVKPNEVTFVGLIHA 349
Query: 331 CAQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAA 388
C+ G + +G+ + + ++ I+ T L++++++ G +++A + + D
Sbjct: 350 CSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEP 409
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
+W +++ +G A+ + +++ KP+D + +LS
Sbjct: 410 TWAALLSSCKRHGNTQMAVRIADHLLN--LKPEDPSSYILLS 449
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 199/586 (33%), Positives = 318/586 (54%), Gaps = 45/586 (7%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ F+K F + +FS + +G+ PD+ P V K L ++ G+++H + + +GL
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV------------------------ 155
D+ V +S++ MY + + + +FD++P VV
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 156 -----------SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
SWN ISG + + DAV +F+ M L PD +V S L A L
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLE-GLKPDGTSVSSVLPAVGDLD 224
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+G +IH Y I Q L + +AL+DMY KC C SE +F+EM +V ++V+
Sbjct: 225 MPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVT 284
Query: 264 GYVNCGQLEKARDLFDRSPVRD--IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
G G ++ A ++F + D +V WT+MI Q + EA+ LFREMQI +KP+
Sbjct: 285 GLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNS 344
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
+ LL C + AL GK H + N I D V +ALI+MYAKCG + + F
Sbjct: 345 VTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDM 404
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ ++ SW S++ G AM+GK +A+ +F M G KPD ++F VLSAC+ GGL +EG
Sbjct: 405 MPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEG 464
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
+F++M+ + ++ ++EHY C++ LLGR+G L+EA +I+++P E + + +GALLS
Sbjct: 465 WFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCV---WGALLS 521
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
+CR++ VD+GE A + ++E ++ + LL+NIYAS W +V VR M+ G++K
Sbjct: 522 SCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKN 581
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNA 607
PG S IEI +H L GD SH +M +I ++++AK ++ K++
Sbjct: 582 PGYSWIEIKNKVHMLLAGDSSHPQMPQI---IEKLAKLTVEMKKSG 624
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 178/388 (45%), Gaps = 68/388 (17%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
L+++N +I F + GS+ ++L+F + G+ PD + V AVG L G ++H
Sbjct: 175 LVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHC 234
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
YV+K GL D +V ++++DMYG + +F+EM + DV + N ++G + ++
Sbjct: 235 YVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDN 294
Query: 173 AVDVFRR-------------MRQGCN-------------------LMPDEGTVVSTLSAC 200
A++VF++ M C+ + P+ T+ L AC
Sbjct: 295 ALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPAC 354
Query: 201 TALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWT 259
+ L GK H + + F + +G+AL+DMY KCG + +R FD MPN+N++ W
Sbjct: 355 GNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWN 414
Query: 260 SMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP 319
S+++GY G+ EA+ +F MQ KP
Sbjct: 415 SLMAGYAMHGKTF-------------------------------EAINIFELMQRCGQKP 443
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA--TALIEMYAKCGLIEKALE 377
D +L+ C Q G E+G + ++ N V+A + + ++ + + G +E+A
Sbjct: 444 DHVSFTCVLSACTQGGLTEEGWFYFDSMSRNH-GVEARMEHYSCMVTLLGRSGRLEEAYA 502
Query: 378 IFYELR-EKDAASWTSIICGLAMNGKIN 404
+ ++ E D+ W +++ ++ +++
Sbjct: 503 MIKQMPFEPDSCVWGALLSSCRVHNRVD 530
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 290/524 (55%), Gaps = 39/524 (7%)
Query: 109 KVHGY---VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++HG ++KT D ++ + + L + F +M + +V +N I G V
Sbjct: 151 ELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFV 210
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
C A+ + M + N++P T S + ACT + +ELG+ +H +I + E
Sbjct: 211 YCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHL 270
Query: 225 IMGNALLDMYCKCGCLSEARELFDEM-------------------------------PNK 253
+ AL+D Y K LSEAR++FDEM P +
Sbjct: 271 FVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPER 330
Query: 254 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
N W +M+ GY G +E A LF++ P +DI+ WT MI Y Q ++ +A+A++ EM+
Sbjct: 331 NTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMR 390
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
+ + PD+ + + + CA +GALE GK IH Y+ + +D + +AL++MYAKCG ++
Sbjct: 391 LNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLD 450
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+L IF++L +K+ W ++I GLA++G KAL +F+ M P+ +TFI +LSAC+
Sbjct: 451 LSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACT 510
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H GLVDEGR F +MT Y I+P + HYGC++D+L ++G L+EA ELI+ + E N II
Sbjct: 511 HAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSII- 569
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+GALL+ C+++GN ++ E L +E +S + LL ++YA W +V ++R M
Sbjct: 570 --WGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMM 627
Query: 554 KEMGV-RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
KE GV +K PG S IE+ G IH+F SH + +IY +L +
Sbjct: 628 KEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVLTEL 671
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 191/438 (43%), Gaps = 102/438 (23%)
Query: 45 FGSIQSPCLLAYNLLIKAFAKKG-SFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGE 103
F +++P + YN +IK F G FR L E V P ++T+ + KA ++
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 250
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE--------------- 148
V+ G+ VH ++ K G E +V +++D Y L + +K+FDE
Sbjct: 251 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSA 310
Query: 149 ----------------MPDKDVVSWNVSISGHVKCMRFE--------------------- 171
MP+++ +WN I G+ + E
Sbjct: 311 LARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMI 370
Query: 172 ----------DAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQEL 220
DA+ ++ MR ++PDE T+ + SAC + LELGKEIH Y+ +Q L
Sbjct: 371 TCYSQNKQYQDALAIYSEMRLN-GIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGL 429
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+G+AL+DMY KCG L + +F ++ +KN+ CW +++ G
Sbjct: 430 NLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLA-------------- 475
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
++GY + +A+ +F M+ ++ P+ +++L+ C G +++G
Sbjct: 476 ------------VHGYAE-----KALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEG 518
Query: 341 KWIHGYINENR---ITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICG 396
+ +++ R I D +++M +K G + +ALE+ + E ++ W +++ G
Sbjct: 519 R--SRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNG 576
Query: 397 LAMNGKINKALELFSQMI 414
++G A + Q++
Sbjct: 577 CKLHGNCEIAEDAVEQLM 594
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 142/274 (51%), Gaps = 6/274 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
++F+ ++N T N ++ + GN+ AE +F + + ++++ +I +++ +
Sbjct: 322 KLFEEMPERNTATWNTMID--GYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQY 379
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
+ +L ++S++R G+ PD T V A +G ++ G+++H YV+ GL D Y+ +++
Sbjct: 380 QDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSAL 439
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY G + +F ++ DK++ WN I G E A+ +F M + +MP+
Sbjct: 440 VDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMERE-KIMPN 498
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELF 247
T +S LSACT ++ G+ + ++ + P + + ++DM K G L+EA EL
Sbjct: 499 GVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELI 558
Query: 248 DEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDR 280
M N I W ++++G G E A D ++
Sbjct: 559 KSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQ 592
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 198/642 (30%), Positives = 330/642 (51%), Gaps = 94/642 (14%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL---LAYNLLIKAFAKKGSFRK 71
G + N N L+ + G+L A +F I + +++N ++ A K + R
Sbjct: 179 GFESNVFVCNALVAM--YSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRT 236
Query: 72 SLLLFSKL----RERGVS--PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
+L LFS++ E+ + D + + A L + + +++H Y ++ G D +V
Sbjct: 237 ALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFV 296
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ--- 182
CN+++D Y G + + +F+ M KDVVSWN ++G+ + +F A ++F+ MR+
Sbjct: 297 CNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENI 356
Query: 183 -------------------GCNLM------------PDEGTVVSTLSACTALKNLELGKE 211
G + P+ T++S LSAC +L L G E
Sbjct: 357 PLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGME 416
Query: 212 IHRYINQELEFTP-------------IMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
H Y ++ + ++ NAL+DMY KC AR +F+ +P +
Sbjct: 417 THAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRE---- 472
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM--QIIR 316
R++V WT MI GY Q+ ++A+ LF EM +
Sbjct: 473 -------------------------RNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYA 507
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV--VATALIEMYAKCGLIEK 374
+ P+ + + +L CA L +L GK IH Y+ + +V VA LI+MY+KCG ++
Sbjct: 508 VAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDT 567
Query: 375 ALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSH 434
A +F + +++ SWTS++ G M+G+ +AL++F +M G PDDI+F+ +L ACSH
Sbjct: 568 ARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627
Query: 435 GGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP 494
G+VD+G +F+ M Y + +HY C+IDLL R+G LD+A + I+++P E + I
Sbjct: 628 SGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAI-- 685
Query: 495 LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMK 554
+ ALLSACR++ NV++ E L +++++ +TL++NIYA+A RW+DV +RQ MK
Sbjct: 686 -WVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMK 744
Query: 555 EMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+ G++K PGCS ++ F VGD SH EIYS+L+R+
Sbjct: 745 KSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERL 786
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 245/472 (51%), Gaps = 33/472 (6%)
Query: 48 IQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG 107
+ SP + +NLL++A ++G +++ + ++ G PD+FT P+ KA G L + G
Sbjct: 110 VPSPAVW-WNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSG 168
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK---DVVSWNVSISGH 164
HG + G E + +VCN+++ MY G + + +FDE+ K DV+SWN ++ H
Sbjct: 169 SAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAH 228
Query: 165 VKCMRFEDAVDVFRRM-----RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
VK A+D+F M + N D ++V+ L AC +LK L KEIH Y +
Sbjct: 229 VKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRN 288
Query: 220 LEFT-PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
F + NAL+D Y KCG + +A +F+ M K+V+ W +MV+GY G+ A +LF
Sbjct: 289 GTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELF 348
Query: 279 -----DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQ 333
+ P+ D++ W+A+I GY Q EA+ F++M + +P+ +++LL+ CA
Sbjct: 349 KNMRKENIPL-DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACAS 407
Query: 334 LGALEQGKWIHGY------------INENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
LGAL QG H Y + D VV ALI+MY+KC + A IF
Sbjct: 408 LGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNS 467
Query: 382 L--REKDAASWTSIICGLAMNGKINKALELFSQMISG--GAKPDDITFIGVLSACSHGGL 437
+ RE++ +WT +I G A G N AL+LFS+MIS P+ T +L AC+H
Sbjct: 468 IPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSS 527
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAEELIRKIPNEN 488
+ G++ +T ++ + + CLID+ + G +D A + +P N
Sbjct: 528 LRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRN 579
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 180/465 (38%), Gaps = 104/465 (22%)
Query: 111 HGYV----VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
H YV + TG+ C + D VL ++ +P V WN+ + H++
Sbjct: 77 HSYVSPKSLGTGVVASYLACGATSDALSVLERV---------VPSP-AVWWNLLVRAHIE 126
Query: 167 CMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTP 224
R + A+ V RM R G PD T+ L AC L + G H I E
Sbjct: 127 EGRLDRAIGVSCRMLRAGTK--PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNV 184
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNK---NVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ NAL+ MY + G L +A +FDE+ K +VI W S+V+ +V A DL
Sbjct: 185 FVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDL---- 240
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
F E + E + + D +V +L CA L AL Q K
Sbjct: 241 --------------------FSEMTTIVHE-KATNERSDIISIVNILPACASLKALPQTK 279
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
IH Y N DA V ALI+ YAKCG ++ A+ +F + KD SW +++ G +G
Sbjct: 280 EIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSG 339
Query: 402 KINKALEL-----------------------------------FSQMISGGAKPDDITFI 426
K A EL F QMI G++P+ +T I
Sbjct: 340 KFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTII 399
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQP----------------KLEHYGCLIDLLGR 470
+LSAC+ G + +G T Y ++ L + LID+ +
Sbjct: 400 SLLSACASLGALSQGME-----THAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSK 454
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
A + IP ++ + ++ YG+ + KL
Sbjct: 455 CRSFKAARTIFNSIPRRERNVVT--WTVMIGGYAQYGDSNDALKL 497
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 66/182 (36%), Gaps = 22/182 (12%)
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKW-IHGYINENRITVDAVVATALIEMYAK 368
R + +R K I LL+ A L ++ H Y++ + T ++ Y
Sbjct: 42 RSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSL------GTGVVASYLA 95
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
CG AL + + A W ++ G++++A+ + +M+ G KPD T
Sbjct: 96 CGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYA 155
Query: 429 LSACSHGGLVDEGRRFF---------------NTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
L AC G F N + +Y LE + D + R G+
Sbjct: 156 LKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGI 215
Query: 474 LD 475
D
Sbjct: 216 DD 217
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 299/559 (53%), Gaps = 36/559 (6%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
N+ A K+F + L +YN +I +A+ ++ LF +L++ S D +
Sbjct: 308 NMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALS 367
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A + +G ++HG +K+ L + V N+I+DMYG G + LFDEM +D VS
Sbjct: 368 AAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVS 427
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RY 215
WN I+ + + F M + + PDE T S L AC + G E+H R
Sbjct: 428 WNAIITACEQNESEGKTLSHFGAMLRS-KMEPDEFTYGSVLKACAGQRAFSNGMEVHGRI 486
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
I + +G+AL+DMY KC G +E+A
Sbjct: 487 IKSGMGLKMFVGSALVDMYSKC-------------------------------GMMEEAE 515
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+ R + +V W A+I+G+ + +++ F M + ++PD F +L CA L
Sbjct: 516 KIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLA 575
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
+ GK IH + + + D + + L++MY+KCG + +L +F + ++D+ +W ++IC
Sbjct: 576 TVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMIC 635
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A +G +ALELF M+ KP+ TF+ VL ACSH G +G +F M +Y ++
Sbjct: 636 GFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALE 695
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P+LEHY C++D+LGR+G ++EA LI+ +P E + II + LLS C+I GNV++ EK
Sbjct: 696 PQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAII---WRTLLSICKIQGNVEVAEKA 752
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A+ L K++ +DSS +TLL+NIYA A W+ V+ +RQ M+ ++K PGCS IE+ +H
Sbjct: 753 ASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHT 812
Query: 576 FLVGDPSHSEMKEIYSMLD 594
FLV D +H + + IYS+LD
Sbjct: 813 FLVCDKAHPKCEMIYSLLD 831
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 144/610 (23%), Positives = 270/610 (44%), Gaps = 95/610 (15%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI-QSPCLLAYNLLIKAFAKKGS 68
++F+ Q++ + N ++ C G + A+ +F S+ ++++N LI + + G
Sbjct: 80 KVFEEMPQRDIVSWNTMVFGCA--GAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGD 137
Query: 69 FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
+KS+ +F K+R+ GV D+ T K L + G ++HG V+ G ++D ++
Sbjct: 138 IQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSA 197
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLM 187
++DMY + + +F E+PDK+ +SW+ +I+G V+ + + +F+ M R+G +
Sbjct: 198 LVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGV- 256
Query: 188 PDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEAREL 246
+ T S +C L LG ++H + + + I+G A LDMY K
Sbjct: 257 -SQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAK---------- 305
Query: 247 FDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAV 306
C + A LF P ++ + AMI GY + + +A
Sbjct: 306 ---------------------CDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAF 344
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
LF ++Q D+ L L+ A + +G +HG ++ ++ + VA A+++MY
Sbjct: 345 KLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMY 404
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
KCG + +A +F E+ +D SW +II N K L F M+ +PD+ T+
Sbjct: 405 GKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYG 464
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVY------QIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
VL AC+ G+R F+ EV+ + K+ L+D+ + G+++EAE++
Sbjct: 465 SVLKACA-------GQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Query: 481 IRKIPNEN----NEIIVPL---------------------------YGALLSACRIYGNV 509
++ + N II Y +L C V
Sbjct: 518 HYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATV 577
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASA---NRWEDVTNVRQKMKEMGVRKVPGCSS 566
+G+++ A + K+E LL+++Y ++ + + N+ + + RK P S
Sbjct: 578 GLGKQIHAQMIKLE--------LLSDVYITSTLVDMYSKCGNMHDSL--LMFRKAPKRDS 627
Query: 567 IEINGIIHEF 576
+ N +I F
Sbjct: 628 VTWNAMICGF 637
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 132/245 (53%), Gaps = 4/245 (1%)
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELFDE 249
T C+ + L+ GKE H ++ FTP + N L+ MY KC L A ++F+E
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILS-GFTPTVFVTNCLIQMYVKCCALEYAYKVFEE 84
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR-DIVLWTAMINGYVQFNRFDEAVAL 308
MP ++++ W +MV G G++E A+ +F+ P D+V W ++I+GY+Q +++A+
Sbjct: 85 MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F +M+ + + D L L C+ L G IHG + D V +AL++MYAK
Sbjct: 145 FLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
C +E +L++F EL +K+ SW++ I G N ++ + L+LF +M G T+ V
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264
Query: 429 LSACS 433
+C+
Sbjct: 265 FRSCA 269
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 184/402 (45%), Gaps = 45/402 (11%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L+ A +F ++ +++N +I A + S K+L F + + PD FTY V
Sbjct: 408 GALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVL 467
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
KA G +VHG ++K+G+ +V ++++DMY G + +K+ + ++ +V
Sbjct: 468 KACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMV 527
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-R 214
SWN ISG + ED+ F M + + PD T + L C L + LGK+IH +
Sbjct: 528 SWNAIISGFSLQKKSEDSQRFFSHMLE-MGVEPDNFTYATVLDTCANLATVGLGKQIHAQ 586
Query: 215 YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
I EL + + L+DMY KCG + ++ +F + P ++ + W +M+ G+ G E
Sbjct: 587 MIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGE-- 644
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
EA+ LF M +KP+ V++L C+ +
Sbjct: 645 -----------------------------EALELFEHMLHENIKPNHATFVSVLRACSHV 675
Query: 335 GALEQG-----KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAA 388
G ++G K Y E ++ + ++++ + G +E+AL + ++ E DA
Sbjct: 676 GNAKKGLFYFQKMASIYALEPQLE----HYSCMVDILGRSGQVEEALRLIQDMPFEADAI 731
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
W +++ + G + A + S ++ P+D + +LS
Sbjct: 732 IWRTLLSICKIQGNVEVAEKAASSLLK--LDPEDSSAYTLLS 771
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 11/293 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + AEKI ++ ++++N +I F+ + S FS + E GV PDNFTY V
Sbjct: 509 GMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVL 568
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
L V G+++H ++K L D Y+ ++++DMY G + + +F + P +D V
Sbjct: 569 DTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSV 628
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN I G E+A+++F M N+ P+ T VS L AC+ + N + G +
Sbjct: 629 TWNAMICGFAYHGLGEEALELFEHMLHE-NIKPNHATFVSVLRACSHVGNAKKGLFYFQK 687
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVS-----GYVN 267
+ P + + ++D+ + G + EA L +MP + I W +++S G V
Sbjct: 688 MASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVE 747
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+ + A L P D +T + N Y + + + + M+ LK +
Sbjct: 748 VAE-KAASSLLKLDP-EDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKE 798
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
C+ AL+ GK H ++ + T V LI+MY KC +E A ++F E+ ++D SW
Sbjct: 34 CSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSW 93
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+++ G A G++ A +F+ M G D +++ ++S G + + F M +
Sbjct: 94 NTMVFGCAGAGRMELAQAVFNSMPHHG---DVVSWNSLISGYLQNGDIQKSIAVFLKMRD 150
Query: 451 V 451
+
Sbjct: 151 L 151
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 297/539 (55%), Gaps = 45/539 (8%)
Query: 102 GEVKK-GEKVHGYVVKTGLEFDTYVCNSIMDMYGVL------------------------ 136
G+V++ G VH +VKT L T + N ++ +Y +L
Sbjct: 42 GDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSL 101
Query: 137 --------GKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
G + + +L D MP ++VVS+N IS + R +A+ VF ++ + L
Sbjct: 102 LAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGL 161
Query: 187 -----MPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCL 240
D TVVS SAC L++ +E+H + +E T IM NA++D Y K G +
Sbjct: 162 GQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRV 221
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR +FD+M ++ + WTSM++GY L+ A +FD P +D + WTA+I+G+ Q
Sbjct: 222 EDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNG 281
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD---AV 357
+ A+ LF M + P F LV+ L CA++G + +GK +HG+I I D
Sbjct: 282 EEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVF 341
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ALI+MY+KCG + A+ +F + E+D SW S++ G + NG+ ++L +F +M+
Sbjct: 342 IHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDE 401
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P +TF+ VL+ACSH GLV +GRR +M + + ++P+ EHY ID LGR L+EA
Sbjct: 402 VQPTYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNRQLEEA 460
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
E I+ + ++ +GALL AC ++GN+++ E++A L ++E ++S + +L+NIY
Sbjct: 461 SEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIY 520
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
++A +W+D VR MK G+RK S IE+ H F+ D SH E EIY MLD++
Sbjct: 521 SAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKL 579
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 193/439 (43%), Gaps = 78/439 (17%)
Query: 17 QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYNLLIKAFAKKGSFRKSLL 74
+N + N L+ G L A ++ + S +++YN +I + A+ G ++L
Sbjct: 92 HKNAHSYNSLLAALAR-GRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALR 150
Query: 75 LFSKL-RERG-----VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
+F++L R+RG V+ D FT A L + + ++HG VV +G+E + N+
Sbjct: 151 VFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANA 210
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-------- 180
++D Y G++ + + +FD+M +D VSW I+G+ + +DAV VF M
Sbjct: 211 MVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAW 270
Query: 181 ----------------------RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
G ++P +VS L AC + + GKE+H +I +
Sbjct: 271 TALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILR 330
Query: 219 EL----EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
F + NAL+DMY KCG + A +FD M +++I W SMV+G+ + GQ +++
Sbjct: 331 RSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQS 390
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+F+R M+ VQ P +A+LT C+
Sbjct: 391 LAVFER-----------MLKDEVQ--------------------PTYVTFLAVLTACSHA 419
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK----DAASW 390
G + G+ I + ++ + A A I+ + +E+A E L K SW
Sbjct: 420 GLVSDGRRILESMQDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSW 479
Query: 391 TSIICGLAMNGKINKALEL 409
+++ ++G I A E+
Sbjct: 480 GALLGACHVHGNIEIAEEV 498
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 296/549 (53%), Gaps = 36/549 (6%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N ++ AK+ F ++L L+ ++ G P+ FT+PF K+ L G + HG +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE--MPDKDVVSWNVSISGHVKCMRFEDA 173
K G F+ +V ++ MY + N +K+F+E K V +N +SG+V + DA
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDM 233
V +FR+M + + + T++ + AC + NLELG +H
Sbjct: 128 VLLFRQMNEE-GVPVNSVTLLGLIPACVSPINLELGSSLH-------------------- 166
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
C L FD +V ++ Y+ CG + A+ LFD PV+ ++ W AM+
Sbjct: 167 ---CSTLKYG---FDS----DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMV 216
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+GY Q + L+R M + + PD LV +L+ CA LGA G + + + T
Sbjct: 217 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFT 276
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ + ALI MYA+CG + KA +F + E+ SWT+II G M+G A++LF +M
Sbjct: 277 SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEM 336
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
I G +PD F+ VLSACSH GL D+G +F M YQ++P EHY C++DLLGRAG
Sbjct: 337 IRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGR 396
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA+ LI +P + + + +GALL AC+I+ NV++ E + ++E ++ ++ LL
Sbjct: 397 LKEAQTLIESMPIKPDGAV---WGALLGACKIHKNVELAELAFERVIELEPENIGYYVLL 453
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIY++AN + V +R MKE ++K PGCS +E+ G +H F+VGD +H + EIY +L
Sbjct: 454 SNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVL 513
Query: 594 DRMAKTLLD 602
+ + ++
Sbjct: 514 EELEAIIMQ 522
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 202/433 (46%), Gaps = 47/433 (10%)
Query: 6 QIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLL-YAEKIFG-SIQSPCL-LAYNLLIK 61
Q QI ++G P L+ ++C G+L+ A K+F + S L + YN L+
Sbjct: 61 QFHGQITKVGCVFEPFVQTGLISMYCK----GSLVDNARKVFEENFHSRKLTVCYNALVS 116
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ ++LLF ++ E GV ++ T + A ++ G +H +K G +
Sbjct: 117 GYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDS 176
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D V N + MY G + +KLFDEMP K ++SWN +SG+ + + ++++R M
Sbjct: 177 DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD 236
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT--PIMGNALLDMYCKCGC 239
+ PD T+V LS+C L +G E+ + Q FT P + NAL++MY +CG
Sbjct: 237 MN-GVHPDPVTLVGVLSSCANLGAQSVGHEV-EFKMQASGFTSNPFLNNALINMYARCGN 294
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L++A+ +FD MP + ++ WT+++ GY G E
Sbjct: 295 LTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEI-------------------------- 328
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVV 358
AV LF+EM ++PD V +L+ C+ G +QG + N ++
Sbjct: 329 -----AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 383
Query: 359 ATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ++++ + G +++A + + K D A W +++ ++ + A F ++I
Sbjct: 384 YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE-- 441
Query: 418 AKPDDITFIGVLS 430
+P++I + +LS
Sbjct: 442 LEPENIGYYVLLS 454
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/648 (32%), Positives = 330/648 (50%), Gaps = 82/648 (12%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTH------PSHGNLLYAEKIFGSIQSPCLLAY 56
L QI AQ GL + ++L++F + P H +L ++ ++ P +
Sbjct: 19 HLLQIHAQFIASGLLADAFAASRLLLFTSASRLLPLPFHHSL----RLLRLVRYPNAFSC 74
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKV------ 110
N L+K+ G L L++ L PD++T+P + A +V +G +V
Sbjct: 75 NTLLKSALIGGMPHLCLPLYASL---PAPPDSYTHPILAAACASRKDVIEGRQVHAHAVS 131
Query: 111 HGY-------------------------VVKTGLEFDTYVCNSIM--------------- 130
HG+ V G +D N+I+
Sbjct: 132 HGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVEV 191
Query: 131 ----------------DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
++G G + +++FD +D+ +W IS + F +A+
Sbjct: 192 FAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEAL 251
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDM 233
VF MR+ DE +VS +SAC + ++ G+ H + + + + + NAL+ M
Sbjct: 252 HVFSCMRRE-RWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHM 310
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y C + AR LFD + W SM++GY+ G ++ A LF P +D V W+ +I
Sbjct: 311 YSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVI 370
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+G VQ N+ +A+ +F MQ ++PD+ +V++++ C L ALE+GK +H YI +N+
Sbjct: 371 SGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYY 430
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
V V+ T+LI MY KCG +E ALE F + EK W ++I GLAMNG + K+L++FS+M
Sbjct: 431 VSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEM 490
Query: 414 -ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
S A P++ITF GVLSAC H GLVDEGR FF M YQI P + HYGC++DLLGRAG
Sbjct: 491 EASDTATPNEITFTGVLSACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAG 550
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
+ EAE++I+ +P + VP +GALL AC +G ++GE++ L + F T+
Sbjct: 551 YVKEAEDMIQSMPMSPD---VPAWGALLGACWKHGEYEVGERVGRKLVNRDPLHDGFQTM 607
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD 580
L+NIYA W+ V ++R MK+ V+KV G S ++ + +E L GD
Sbjct: 608 LSNIYAKEGMWQSVDDLRGSMKQRHVQKVSGHSVVK-SSHSYEILAGD 654
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/529 (37%), Positives = 303/529 (57%), Gaps = 43/529 (8%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGV--LGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+H ++ GL +T ++ V G + +++FD++P + +N I G+
Sbjct: 7 LHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNS 66
Query: 168 MRFEDAVDVFRRMRQGCN-LMPDEGTVVSTLSACTA------------------------ 202
DAV +FRRM C+ L P+E T+ L AC
Sbjct: 67 DDPIDAVLLFRRMI--CSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVF 124
Query: 203 LKN-----------LELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
++N + +++ I + I+ NAL+DMY KCG L A+ +FD
Sbjct: 125 VQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIFDRTQ 184
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
KNV+ WTSM+S Y G +E AR +FD+ P +++V W +MI+ Y++ ++ EA+ LF +
Sbjct: 185 EKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNK 244
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M+ R+ PD+ LV++L C+QLG L GK IH YI N+ + +LI+MYAKCG
Sbjct: 245 MRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGP 304
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
+ AL+IF E+ K+ SW II LA++G +A++LF +M + G PD+IT G+LSA
Sbjct: 305 VVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSA 364
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
CSH GLVD G +F+ M +Y++ ++EHY C++DLLGR GLL EA ELI ++P + + +
Sbjct: 365 CSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVV 424
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
+ +GALL ACRI+GNV++G+++ L ++E + L++NIY A RWEDV +R+
Sbjct: 425 V---WGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRK 481
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
M + G++K SSIEI+G I+EF+V D H IY+MLD++ L
Sbjct: 482 LMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHL 530
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 216/519 (41%), Gaps = 135/519 (26%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LK + AQI GL TL KL+ FC G+L YA+++F I P YN LI
Sbjct: 1 MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ ++ ++LLF ++ G+SP+ FT PFV KA G + VHG +K G+
Sbjct: 61 RGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIG 120
Query: 121 ----------------------------------FDTYVCNSIMDMYGVLGKICNVKKLF 146
D V N+++DMY G + + + +F
Sbjct: 121 SLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIF 180
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFE-------------------------------DAVD 175
D +K+VVSW IS + + E +A+D
Sbjct: 181 DRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALD 240
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMY 234
+F +MR ++PDE T+VS L+AC+ L +L +GK+IH YI + + + + N+L+DMY
Sbjct: 241 LFNKMRNS-RVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMY 299
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYV--NCGQLEKARDLFDRSPVRDIVLWTAM 292
KCG + A ++F EMP KN++ W ++ CG
Sbjct: 300 AKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGL---------------------- 337
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
EA+ LF EMQ PD+ L LL+ C+ G ++ G +
Sbjct: 338 -----------EAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLY---------- 376
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
+ + G+I + ++ + ++ L G + +A+EL +
Sbjct: 377 ------------YFDRMGVIYRV--------PREIEHYACMVDLLGRGGLLGEAIELIGR 416
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
M KPD + + +L AC G V+ G++ + E+
Sbjct: 417 M---PMKPDVVVWGALLGACRIHGNVEIGKQILKQLLEL 452
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 267/456 (58%), Gaps = 4/456 (0%)
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALK 204
+F + +++ +N I G+V A+ + M L+ + T + ACT L
Sbjct: 68 IFQNLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLN-YGLLANNYTFPPLIKACTTLG 126
Query: 205 NLE--LGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+ +G +H ++ + P + +AL++ Y + AR LFD +PN++V+ WT+M
Sbjct: 127 SSSKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAM 186
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
+ GY G +E AR LF+ P R+ + W+A++ Y + F E + LFR MQ P++
Sbjct: 187 IDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNE 246
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
+LV++LT CA LGAL QG W+H Y + + ++ATAL++MY+KCG +E AL F
Sbjct: 247 SVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQG 306
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ KDA +W ++I G+AMNG K+LELF++MIS G +P + TF+ VL+AC+H LV EG
Sbjct: 307 IPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEG 366
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
+ F M+ Y ++P+LEHY CL+DL+ RAG+L EAE+ I + ++GA+L
Sbjct: 367 LKLFEQMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLG 426
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
ACR YGN+++G ++ L + D H L N+Y A + VR+ + E G++K
Sbjct: 427 ACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEAGMKKK 486
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
PGCS IE++G + EFL GD SHS+ +I LD ++
Sbjct: 487 PGCSIIEVDGTVEEFLAGDLSHSQAPQICKTLDSLS 522
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 204/443 (46%), Gaps = 72/443 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYNLL 59
++QLKQI A + Q L ++P + +L+ ++ + +A IF ++ + YN +
Sbjct: 24 LSQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPSFFSHACLIFQNLSLRNIFMYNSM 83
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK--GEKVHGYVVKT 117
I+ + S +++L + + G+ +N+T+P + KA LG K G VH +VV
Sbjct: 84 IRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKLIGCLVHAHVVTF 143
Query: 118 GLEFDTYVCNSIM-------------------------------DMYGVLGKICNVKKLF 146
G + D +V ++++ D YG +G + + + LF
Sbjct: 144 GFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEHARILF 203
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
++MP+++ +SW+ ++ + + F++ + +FRRM++ MP+E +VS L+AC L L
Sbjct: 204 EDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEA-GTMPNESVLVSVLTACAHLGAL 262
Query: 207 ELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
G +H Y Q + PI+ AL+DMY KCGC+ A F +PNK+ W +M+SG
Sbjct: 263 AQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISGV 322
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
G K+ +LF++ MI+ Q P + V
Sbjct: 323 AMNGDAWKSLELFNK-----------MISNGTQ--------------------PTETTFV 351
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYE--- 381
A+LT C +++G + ++ N + A L+++ A+ G++ +A + E
Sbjct: 352 AVLTACTHARLVKEGLKLFEQMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMG 411
Query: 382 -LREKDAASWTSIICGLAMNGKI 403
L DA W +++ G I
Sbjct: 412 GLGRGDANVWGAMLGACRTYGNI 434
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ +A +F + ++++ ++ A+++ G F++ L LF +++E G P+ V
Sbjct: 194 GDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVL 253
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + +G VH Y + + + + +++DMY G + + F +P+KD
Sbjct: 254 TACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAG 313
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+WN ISG ++++F +M P E T V+ L+ACT + ++ G ++
Sbjct: 314 AWNAMISGVAMNGDAWKSLELFNKMISN-GTQPTETTFVAVLTACTHARLVKEGLKLFEQ 372
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDE----MPNKNVICWTSMVSGYVNCG 269
++ P + + L+D+ + G L+EA + +E + + W +M+ G
Sbjct: 373 MSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTYG 432
Query: 270 QLEKARDLFDR 280
+E ++ +
Sbjct: 433 NIEVGNRVWKK 443
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 259/418 (61%), Gaps = 8/418 (1%)
Query: 188 PDEGTVVSTLSACTALKNLE--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEA 243
P+ T ++ LS C + LG +H Y + L+ T +M G A+L MY K G +A
Sbjct: 16 PNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFRKA 75
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
R +FD M +KN + W +M+ GY+ GQ+ A LFD RD++ WTAM+NG+V+ +
Sbjct: 76 RLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFHE 135
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA++ FREMQI +KPD ++A L C LGAL G WIH Y+ + V+ +LI
Sbjct: 136 EALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVSNSLI 195
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
++Y +CG +E A ++F ++ ++ SW S+I G A NG +++L F +M G KPD +
Sbjct: 196 DLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEEGFKPDAV 255
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TF G L+ACSH GLV+EG R+F TM Y+I P++EHYGC++DL RAG L++A ++++
Sbjct: 256 TFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKVVQS 315
Query: 484 IPNENNEIIVPLYGALLSACRIYG-NVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P + NE+++ G+LL+AC+ +G N + E+L L + K S + +L+N+YA+ +
Sbjct: 316 MPMKPNEVVI---GSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVILSNMYAADGK 372
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
WE + +R+KMK +G++K PG SSIEI+ H F+ GD +H E I +L M+ L
Sbjct: 373 WEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETANIREILGLMSSDL 430
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 158/339 (46%), Gaps = 68/339 (20%)
Query: 76 FSKLRERGVSPDNFTYPFVFKAVGWL--GEVKKGEKVHGYVVKTGLE------------- 120
FS +R GV P++ T+ + G G G+ +HGY K GL+
Sbjct: 6 FSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGM 65
Query: 121 -------------FD------TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
FD + N+++D Y G++ KLFDEM ++D++SW +
Sbjct: 66 YSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMV 125
Query: 162 SGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQEL 220
+G VK E+A+ FR M Q + PD +++ L+ACT L L G IHRY+ +Q+
Sbjct: 126 NGFVKKGFHEEALSWFREM-QISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDF 184
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ + N+L+D+YC+CGC+ AR++FD+M + V+ W S++ G+ G
Sbjct: 185 KNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAH-------- 236
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
E++ FR+MQ KPD LT C+ +G +E+G
Sbjct: 237 -----------------------ESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 273
Query: 341 -KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
++ + RI+ ++++Y++ G +E AL++
Sbjct: 274 LRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKV 312
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 147/315 (46%), Gaps = 10/315 (3%)
Query: 11 IFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFR 70
IF +N T N ++ + G + A K+F + + L+++ ++ F KKG
Sbjct: 78 IFDYMEDKNSVTWNTMID--GYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFHE 135
Query: 71 KSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIM 130
++L F +++ GV PD A LG + G +H YV+ + + V NS++
Sbjct: 136 EALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVSNSLI 195
Query: 131 DMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
D+Y G + +++FD+M + VVSWN I G +++ FR+M++ PD
Sbjct: 196 DLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEE-GFKPDA 254
Query: 191 GTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFD 248
T L+AC+ + +E G + + ++ +P + + ++D+Y + G L +A ++
Sbjct: 255 VTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKVVQ 314
Query: 249 EMPNK-NVICWTSMVSGYVNCGQ----LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
MP K N + S+++ N G E+ V+ + + N Y +++
Sbjct: 315 SMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWE 374
Query: 304 EAVALFREMQIIRLK 318
A + R+M+ + LK
Sbjct: 375 GASKMRRKMKGLGLK 389
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 294/553 (53%), Gaps = 36/553 (6%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N+ ++ A + F +S+ L+ + G SPD F++PF+ K+ L G+++H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS--WNVSISGHVKCMRFEDA 173
K G E + +V +++ MY G + + +K+F+E P +S +N ISG+ + DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDM 233
+FRRM++ + D T++ + CT + L LG+ +H
Sbjct: 141 AYMFRRMKE-TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ------------------ 181
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
C G L + V S ++ Y+ CG +E R LFD PV+ ++ W A+I
Sbjct: 182 -CVKGGL-----------DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+GY Q + + L+ +M+ + PD F LV++L+ CA LGA + G + + N
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ V+ A I MYA+CG + KA +F + K SWT++I M+G L LF M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
I G +PD F+ VLSACSH GL D+G F M Y+++P EHY CL+DLLGRAG
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
LDEA E I +P E + + +GALL AC+I+ NVDM E A + + E + ++ L+
Sbjct: 410 LDEAMEFIESMPVEPDGAV---WGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLM 466
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIY+ + E + +R M+E RK PG S +E G +H FL GD SH + +E++ ML
Sbjct: 467 SNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRML 526
Query: 594 DRMAKTLLDSKQN 606
D + ++++ N
Sbjct: 527 DELETSVMELAGN 539
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 202/433 (46%), Gaps = 45/433 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIF--GSIQSPCLLAYNLLIK 61
+Q+ + + G + P L L+ ++C G + A K+F S + YN LI
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYC---KCGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + +F +++E GVS D+ T + + G +HG VK GL+
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ V NS + MY G + ++LFDEMP K +++WN ISG+ + D ++++ +M+
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK 249
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGC 239
+ PD T+VS LS+C L ++G E+ + + F P + NA + MY +CG
Sbjct: 250 SS-GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGN 307
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L++AR +FD MP K+++ WT+M+ Y G E LFD R I
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI------------- 354
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
+PD + V +L+ C+ G ++G + E ++
Sbjct: 355 ------------------RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ L+++ + G +++A+E + E D A W +++ ++ ++ A F+++I
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE-- 454
Query: 418 AKPDDITFIGVLS 430
+P++I + ++S
Sbjct: 455 FEPNNIGYYVLMS 467
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 307/559 (54%), Gaps = 41/559 (7%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ ++N +I A+ G ++L FS +R+ + P ++P KA L ++ G++ H
Sbjct: 41 VFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQ 100
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
G + D +V ++++ MY GK+ + +K+FDE+P +++VSW I G+ D
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 173 AVDVFRRM-----RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIM 226
AV +F+ + + D +VS +SAC+ + L + IH + I + + +
Sbjct: 161 AVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSV 220
Query: 227 GNALLDMYCKC--GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
GN LLD Y K G ++ AR++FD++ +K+ + + S++S Y G +A D+F R
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKE 280
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+V + + L +L + GAL GK IH
Sbjct: 281 KVVTFNCI------------------------------TLSTVLLAVSHSGALRIGKCIH 310
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ + D +V T++I+MY KCG +E A F ++ K+ SWT++I G M+G
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
KALELF MI G +P+ ITF+ VL+ACSH GL D G +FN M + ++P LEHYGC+
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCM 430
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAG L +A +LI+K+ E + II + +LL+ACRI+ NV++ E A L +++
Sbjct: 431 VDLLGRAGFLQKAYDLIQKMKMEPDSII---WSSLLAACRIHKNVELAEISVARLFELDP 487
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+ ++ LL++IYA + RW+DV VR MK G+ K PG S +E+NG +H FL+GD H
Sbjct: 488 SNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 585 EMKEIYSMLDRMAKTLLDS 603
+ ++IY L + + LL++
Sbjct: 548 QREKIYEFLAELNRKLLEA 566
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 135/287 (47%), Gaps = 11/287 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ I + + + G + N L+ G + A KIF I ++YN ++ +A
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 65 KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G ++ +F +L +E+ V+ + T V AV G ++ G+ +H V++ GLE D
Sbjct: 263 QSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V SI+DMY G++ + FD M +K+V SW I+G+ A+++F M
Sbjct: 323 IVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLS 241
+ P+ T VS L+AC+ ++G + P + + ++D+ + G L
Sbjct: 383 -GVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Query: 242 EARELFDEMP-NKNVICWTSMVSG-----YVNCGQLEKARDLFDRSP 282
+A +L +M + I W+S+++ V ++ AR LF+ P
Sbjct: 442 KAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVAR-LFELDP 487
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ D SW S+I LA +G +AL FS M P +F + ACS + G++
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQ 97
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ V+ Q + LI + G L++A ++ +IP N
Sbjct: 98 -THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 251/419 (59%), Gaps = 37/419 (8%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
+++P + + L +C +LG+ H + + E+ I+ LLD Y K
Sbjct: 25 DVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAK------- 77
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI--VLWTAMINGYVQFNR 301
GYV E+AR+LFD R+ V W MI+ YVQ
Sbjct: 78 -------------------HGYV-----EEARNLFDNMTERNSNSVTWNTMISAYVQCGE 113
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
F A+++F++MQ +KP + +V+LL+ CA LGAL+ G+WIHGYI R+ +D V+ A
Sbjct: 114 FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 173
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MY KCG +E A+++F+ L K+ W SII GL MNG+ +A+ F M G KPD
Sbjct: 174 LIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 233
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
+TF+G+LS CSH GL+ G+R+F+ M VY ++P +EHYGC++DLLGRAG L EA ELI
Sbjct: 234 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 293
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
R +P + N +++ G+LL AC+I+ + +GE++ L +++ D + L+N+YAS +
Sbjct: 294 RAMPMKPNSMVL---GSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLS 350
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
RW+DV R+ M + GV K PGCSSIE+N I+HEF+ GD SH + +I + LD +AK L
Sbjct: 351 RWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKEL 409
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 36/324 (11%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+I+ + G L +S + V P ++ + ++ GE + GE H ++K G
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV--VSWNVSISGHVKCMRFEDAVDV 176
E+D + ++D Y G + + LFD M +++ V+WN IS +V+C F A+ +
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
F++M Q N+ P E T+VS LSAC L L++G+ IH YI + L+ ++GNAL+DMYC
Sbjct: 121 FQQM-QSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYC 179
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
KCG L A ++F + KN+ CW S++ G +NG
Sbjct: 180 KCGALEAAIDVFHGLSRKNIFCWNSIIVGL--------------------------GMNG 213
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITV 354
R +EA+A F M+ +KPD V +L+GC+ G L G ++ + +
Sbjct: 214 -----RGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEP 268
Query: 355 DAVVATALIEMYAKCGLIEKALEI 378
++++ + G +++ALE+
Sbjct: 269 GVEHYGCMVDLLGRAGYLKEALEL 292
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 26/327 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYNLLIKA 62
+ QI ++G + + L+ F + HG + A +F ++ ++ + +N +I A
Sbjct: 50 EAFHCQIMKMGFEYDMILQTGLLDF--YAKHGYVEEARNLFDNMTERNSNSVTWNTMISA 107
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ + G F ++ +F +++ V P T + A LG + GE +HGY+ L+ D
Sbjct: 108 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 167
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+ N+++DMY G + +F + K++ WN I G R E+A+ F M +
Sbjct: 168 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEK 227
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNA-----LLDMYCKC 237
+ PD T V LS C+ L G+ RY ++ L + ++D+ +
Sbjct: 228 E-GIKPDGVTFVGILSGCSHSGLLSAGQ---RYFSEMLGVYGLEPGVEHYGCMVDLLGRA 283
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSG-YVNCGQLEKARDLFDRSPVRDIVL-------W 289
G L EA EL MP K SMV G + Q+ K L ++ + + L +
Sbjct: 284 GYLKEALELIRAMPMKP----NSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNY 339
Query: 290 TAMINGYVQFNRFDEAVALFREMQIIR 316
+ N Y +R+D+ V R++ I R
Sbjct: 340 VFLSNLYASLSRWDD-VNTCRKLMIKR 365
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 300/568 (52%), Gaps = 37/568 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + + +N +I F++ F S+ +F + + G+S D+ T V AV
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L E + G + K GL D YV ++ +Y GK C + LFD++ D++S+N
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
ISG+ E AV +FR + + + T+V + +L+L + I +
Sbjct: 287 ISGYTFNHETESAVTLFRELLASGQRV-NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ P + AL +YC+ +++ AR LFD
Sbjct: 346 IILQPSVSTALTTVYCRLN-------------------------------EVQFARQLFD 374
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
SP + + W AMI+GY Q D A++LF+EM + +L P+ + ++L+ CAQLGAL
Sbjct: 375 ESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSI 433
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GKW+HG I R+ + V+TAL++MYAKCG I +A ++F + +K+ +W ++I G +
Sbjct: 434 GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGL 493
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G +AL+LF +M+ G P +TF+ +L ACSH GLV EG F++M Y QP E
Sbjct: 494 HGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSE 553
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY C++D+LGRAG L A E I ++P E + +GALL AC I+ N +M + L
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLEPGPAV---WGALLGACMIHKNTEMANVASKRL 610
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+++ ++ ++ LL+NIY++ + +VRQ +K+ + K PGC+ IEI+ + F G
Sbjct: 611 FQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSG 670
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDSKQNA 607
D SH + I+ ML+++ + ++ A
Sbjct: 671 DRSHPQATAIFEMLEKLTGKMREAGYQA 698
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 250/511 (48%), Gaps = 44/511 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHP--SHGNLLYAEKIFGSIQSPCLLAYNL 58
++QL QIQAQ+ G+ + ++ KL TH G + + ++F + P L +N+
Sbjct: 27 LSQLLQIQAQLILHGIHYDLSSITKL----THKFFDLGAVAHVRQLFNKVSKPDLFLFNV 82
Query: 59 LIKAFAKKGSFRKSLLLFSKLRE-RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+ F+ G + S+ L++ LR+ + PDNFTY F A L + + G +H + +
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G+ + +V ++I+D+Y + +K+FD MP++D V WN ISG + FED++ VF
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
M L D T+ + L+A L+ LG I
Sbjct: 203 VDMLD-VGLSFDSTTLATVLTAVAELQEYRLGMGIQ------------------------ 237
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
CL+ + L + +V T ++S Y CG+ K R LFD+ D++ + AMI+GY
Sbjct: 238 -CLASKKGL-----HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYT 291
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ + AV LFRE+ + + LV L+ L+ + I + I +
Sbjct: 292 FNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPS 351
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V+TAL +Y + ++ A ++F E EK ASW ++I G NG ++A+ LF +M+
Sbjct: 352 VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-Q 410
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
P+ +T +LSAC+ G + G ++ + + + +++ + L+D+ + G + EA
Sbjct: 411 LSPNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEA 469
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+L + ++N V + A+++ ++G+
Sbjct: 470 RQLFDLMVDKN----VVTWNAMITGYGLHGH 496
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 8/250 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
+ IQ +IG+ P L V+C + +A ++F L ++N +I +
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYC---RLNEVQFARQLFDESPEKSLASWNAMISGY 391
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G +++ LF ++ + +SP+ T + A LG + G+ VHG + LE +
Sbjct: 392 TQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNV 450
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YV +++DMY G I ++LFD M DK+VV+WN I+G+ ++A+ +F M Q
Sbjct: 451 YVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLS 241
+ P T +S L AC+ + G EI + F P+ + ++D+ + G L+
Sbjct: 511 -GIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569
Query: 242 EARELFDEMP 251
A E + MP
Sbjct: 570 NALEFIERMP 579
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 300/568 (52%), Gaps = 37/568 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + + +N +I F++ F S+ +F + + G+S D+ T V AV
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L E + G + K GL D YV ++ +Y GK C + LFD++ D++S+N
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
ISG+ E AV +FR + + + T+V + +L+L + I +
Sbjct: 287 ISGYTFNHETESAVTLFRELLASGQRV-NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ P + AL +YC+ +++ AR LFD
Sbjct: 346 IILQPSVSTALTTVYCRLN-------------------------------EVQFARQLFD 374
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
SP + + W AMI+GY Q D A++LF+EM + +L P+ + ++L+ CAQLGAL
Sbjct: 375 ESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSI 433
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
GKW+HG I R+ + V+TAL++MYAKCG I +A ++F + +K+ +W ++I G +
Sbjct: 434 GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGL 493
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G +AL+LF +M+ G P +TF+ +L ACSH GLV EG F++M Y QP E
Sbjct: 494 HGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSE 553
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY C++D+LGRAG L A E I ++P E + +GALL AC I+ N +M + L
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLEPGPAV---WGALLGACMIHKNTEMANVASKRL 610
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
+++ ++ ++ LL+NIY++ + +VRQ +K+ + K PGC+ IEI+ + F G
Sbjct: 611 FQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSG 670
Query: 580 DPSHSEMKEIYSMLDRMAKTLLDSKQNA 607
D SH + I+ ML+++ + ++ A
Sbjct: 671 DRSHPQATAIFEMLEKLTGKMREAGYQA 698
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 251/511 (49%), Gaps = 44/511 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHP--SHGNLLYAEKIFGSIQSPCLLAYNL 58
++QL QIQAQ+ G+ + ++ KL TH G + + ++F + P L +N+
Sbjct: 27 LSQLLQIQAQLILHGIHYDLSSITKL----THKFFDLGAVAHVRQLFNKVSKPDLFLFNV 82
Query: 59 LIKAFAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+ F+ G + S+ L++ LR++ + PDNFTY F A L + + G +H + +
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G+ + +V ++I+D+Y + +K+FD MP++D V WN ISG + FED++ VF
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
M L D T+ + L+A L+ LG I
Sbjct: 203 VDMLD-VGLSFDSTTLATVLTAVAELQEYRLGMGIQ------------------------ 237
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
CL+ + L + +V T ++S Y CG+ K R LFD+ D++ + AMI+GY
Sbjct: 238 -CLASKKGL-----HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYT 291
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ + AV LFRE+ + + LV L+ L+ + I + I +
Sbjct: 292 FNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPS 351
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V+TAL +Y + ++ A ++F E EK ASW ++I G NG ++A+ LF +M+
Sbjct: 352 VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-Q 410
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
P+ +T +LSAC+ G + G ++ + + + +++ + L+D+ + G + EA
Sbjct: 411 LSPNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEA 469
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGN 508
+L + ++N V + A+++ ++G+
Sbjct: 470 RQLFDLMVDKN----VVTWNAMITGYGLHGH 496
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 8/250 (3%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
+ IQ +IG+ P L V+C + +A ++F L ++N +I +
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYC---RLNEVQFARQLFDESPEKSLASWNAMISGY 391
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G +++ LF ++ + +SP+ T + A LG + G+ VHG + LE +
Sbjct: 392 TQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNV 450
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
YV +++DMY G I ++LFD M DK+VV+WN I+G+ ++A+ +F M Q
Sbjct: 451 YVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLS 241
+ P T +S L AC+ + G EI + F P+ + ++D+ + G L+
Sbjct: 511 -GIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569
Query: 242 EARELFDEMP 251
A E + MP
Sbjct: 570 NALEFIERMP 579
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 299/506 (59%), Gaps = 14/506 (2%)
Query: 104 VKKGEKVHGYVVKTGLEF---DTYVCNSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWN 158
+ G+K+H ++ +GL +T++ N++ +Y G + + LF ++P KDV W
Sbjct: 31 LSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIPRSHKDVTDWT 90
Query: 159 VSISGHVK-CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YI 216
++ V+ + + F+ MR+ ++ D+ ++S CT +++L +G++ +
Sbjct: 91 TLLTSLVQHGTKPSEGFFFFKEMRKE-GVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLV 149
Query: 217 NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARD 276
L + NA+++MY KCG + E R +F EM +NV+ W++++ G V +E R
Sbjct: 150 KMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRV 209
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLG 335
+FD P R+ V WT MI GYV E L EM + RL + L ++L+ CAQ G
Sbjct: 210 VFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSG 269
Query: 336 ALEQGKWIHGY-INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
+ G+W+H Y + + +V TAL++MYAKCG I+ A ++F L +++ +W +++
Sbjct: 270 DVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAML 329
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI 454
GLAM+G+ L++F +MI AKPDD+TF+ VLSACSH GLVD+G +F ++ Y
Sbjct: 330 GGLAMHGRGKFVLDIFPKMIEE-AKPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGT 388
Query: 455 QPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK 514
PK+EHY C++D+LGRAG L+EA LI+K+P NE+++ G+LL +C +G + +GE+
Sbjct: 389 TPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVL---GSLLGSCNAHGKLQLGER 445
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
+ L +++ ++ +H LL+N+Y + + ++RQ +K G+RKVPG SSI + G IH
Sbjct: 446 ILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIH 505
Query: 575 EFLVGDPSHSEMKEIYSMLDRMAKTL 600
+F GD SH KEIY L+ M + L
Sbjct: 506 QFSAGDKSHPLTKEIYHALNNMIQRL 531
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 72/411 (17%)
Query: 5 KQIQAQIFQIGL-QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC--LLAYNLLIK 61
K++ A I GL +P T + + S G A +F I + + L+
Sbjct: 35 KKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIPRSHKDVTDWTTLLT 94
Query: 62 AFAKKGSF-RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + G+ + F ++R+ GV D+ VF + ++ G + G +VK GL
Sbjct: 95 SLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLG 154
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
VCN+IM+MY G + V+++F EM +++VVSW+ + G VK E+ VF M
Sbjct: 155 LGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEM 214
Query: 181 ---------------------RQGCNLMPDEG-----------TVVSTLSACTALKNLEL 208
R+G L+ DE T+ S LSAC ++ +
Sbjct: 215 PERNEVGWTIMIAGYVGNGFSREGF-LLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLM 273
Query: 209 GKEIHRYINQEL--EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYV 266
G+ +H Y + + E ++G AL+DMY KCG + A ++F +P +NV+ W +M+ G
Sbjct: 274 GRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLA 333
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
G+ + D+F + MI +EA KPD +A
Sbjct: 334 MHGRGKFVLDIFPK-----------MI---------EEA------------KPDDLTFMA 361
Query: 327 LLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+L+ C+ G ++QG + +E T ++++ + G +E+A+
Sbjct: 362 VLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLEEAV 412
>gi|255562765|ref|XP_002522388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538466|gb|EEF40072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 472
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 270/472 (57%), Gaps = 5/472 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M Q KQI AQI L TL KL+ FC GNL YA +F I P YN LI
Sbjct: 1 MKQSKQIHAQIILNNLTDQTLTLGKLVSFCAVSDAGNLDYAHLVFNQISIPNKFMYNSLI 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+ + S KS+ L+ +L + G+SP+ FT+PFV KA VHG+ K G
Sbjct: 61 RGYCNSNSPIKSMFLYRQLIDSGLSPNEFTFPFVLKACASKSAHWMSMIVHGHAQKLGFA 120
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
V N +++ Y G I +K+FD+M ++ +VSWN I G+ K ++ +F+ M
Sbjct: 121 SLICVQNGLINAYIACGFIRYARKMFDDMSERSLVSWNSMIGGYSKLGWCKEVFLLFKEM 180
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYIN-QELEFTPIMGNALLDMYCKCGC 239
R+ D+ T+V+ L C+ ++ LG+ +H YI ++ + NAL+DMY KCG
Sbjct: 181 RE-IGTEADDFTLVNLLLVCSRRCDINLGRFVHLYIQITGMKIDLVARNALIDMYAKCGA 239
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L A +F +MPNKNV+ WTSM++ Y G +E AR FD+ P +++V W +MI+ YVQ
Sbjct: 240 LVLAERVFQQMPNKNVVSWTSMITAYAKQGLVEYARKSFDQMPEKNVVSWNSMISSYVQG 299
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
+ EA+ LF EM R+ P++ L+++L+ C Q+G L GK IH YI +
Sbjct: 300 GQCREALDLFHEMHSFRVVPNEATLLSVLSACGQIGDLVMGKKIHNYICGTSSMYSVTLC 359
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+LI+MYAKCG + A+++F E+ K+ SW II LA++G +A+ELF +M + G
Sbjct: 360 NSLIDMYAKCGALRIAIDVFNEMPNKNLVSWNVIIGALALHGYGVEAVELFRKMQAAGVW 419
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
PD+ITF+G+LSACSH GLVD G +F+ M+ +Y +++G L+ LG A
Sbjct: 420 PDEITFMGLLSACSHSGLVDSGLYYFDKMSSIY---VWFQNHGKLVGNLGVA 468
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 165/370 (44%), Gaps = 27/370 (7%)
Query: 267 NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA 326
+ G L+ A +F++ + + ++ ++I GY N +++ L+R++ L P++F
Sbjct: 34 DAGNLDYAHLVFNQISIPNKFMYNSLIRGYCNSNSPIKSMFLYRQLIDSGLSPNEFTFPF 93
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
+L CA A +HG+ + V LI Y CG I A ++F ++ E+
Sbjct: 94 VLKACASKSAHWMSMIVHGHAQKLGFASLICVQNGLINAYIACGFIRYARKMFDDMSERS 153
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
SW S+I G + G + LF +M G + DD T + +L CS ++ GR F +
Sbjct: 154 LVSWNSMIGGYSKLGWCKEVFLLFKEMREIGTEADDFTLVNLLLVCSRRCDINLGR-FVH 212
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
++ ++ L LID+ + G L AE + +++PN+N V + ++++A
Sbjct: 213 LYIQITGMKIDLVARNALIDMYAKCGALVLAERVFQQMPNKN----VVSWTSMITAYAKQ 268
Query: 507 GNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVP---- 562
G V+ K + + E S+++++++ Y + + ++ +M R VP
Sbjct: 269 GLVEYARK--SFDQMPEKNVVSWNSMISS-YVQGGQCREALDLFHEMHSF--RVVPNEAT 323
Query: 563 ------GCSSIE---INGIIHEFLVGDPSHSEMKEIYSMLDRMAKT----LLDSKQNAME 609
C I + IH ++ G S + S++D AK + N M
Sbjct: 324 LLSVLSACGQIGDLVMGKKIHNYICGTSSMYSVTLCNSLIDMYAKCGALRIAIDVFNEMP 383
Query: 610 GDNLVAINFL 619
NLV+ N +
Sbjct: 384 NKNLVSWNVI 393
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 286/491 (58%), Gaps = 8/491 (1%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
++H + +GL ++D Y + +I +F+ +P DV ++N I G
Sbjct: 42 RQIHAQFIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIPSPDVFAYNAMIRGLTLG 101
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIM 226
D++ ++ ++ G L PD T L C+ LK + GK++H + I + +
Sbjct: 102 NCPYDSLLLYNKLLLG-GLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHI 160
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
+L+ MY K CL+ A + E +NV+ SM+SGY++ G +EKAR +FD+ +D
Sbjct: 161 HTSLIHMYAKSDCLACAEGVLAECSQENVLAINSMISGYMSQGHVEKARAMFDKMGAKDA 220
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIR---LKPDKFILVALLTGCAQLGALEQGKWI 343
W+ MI GY + +EA+ +FREM ++ ++P++ LV+ L+ A LGAL+QG+WI
Sbjct: 221 ATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQGRWI 280
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H YI + + T L++MYAKCG I + ++F E++++D +W ++ G AM+G+
Sbjct: 281 HAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVTWGVMMSGFAMHGQA 340
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
K +LF +M++GG +P+++ F+ +LSACSH G ++ G +FN M + I+P +EHYGC
Sbjct: 341 RKCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYFNQMVTDFGIRPSVEHYGC 400
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLLGRAG L EAEELI +P E +I +GALLSACRI+ ++ G + L ++E
Sbjct: 401 MVDLLGRAGQLAEAEELIISMPEEPTAVI---WGALLSACRIHKDLRRGRRAFRQLMQLE 457
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
+ L +++SA E+ NV + +KE + G S IEING++HEF+VGD H
Sbjct: 458 PLRGDRYKLAGQMFSSAGEKEEADNVTRFIKENELETTRGSSFIEINGVVHEFVVGDADH 517
Query: 584 SEMKEIYSMLD 594
+ +E+Y M +
Sbjct: 518 HKAREMYRMWE 528
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 235/524 (44%), Gaps = 106/524 (20%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+++QI AQ GL P +L+ ++ S + YA +F I SP + AYN +I+
Sbjct: 40 EVRQIHAQFIVSGLLARPPNAGRLLD--SYVSMSQIYYALLVFNRIPSPDVFAYNAMIRG 97
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
SLLL++KL G++PDN+TY FV K L + +G++VH V+K G+ D
Sbjct: 98 LTLGNCPYDSLLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPD 157
Query: 123 TYVCNSIMDMY----------GVL---------------------GKICNVKKLFDEMPD 151
T++ S++ MY GVL G + + +FD+M
Sbjct: 158 THIHTSLIHMYAKSDCLACAEGVLAECSQENVLAINSMISGYMSQGHVEKARAMFDKMGA 217
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN--LMPDEGTVVSTLSACTALKNLELG 209
KD +W+ I+G+ K E+A+ +FR M N + P+E +VS+LSA L L+ G
Sbjct: 218 KDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQG 277
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ IH YI + + + +G L+DMY KCG + + +LF EM ++V+ W M+SG+
Sbjct: 278 RWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVTWGVMMSGFAMH 337
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
GQ K LFD EM +P++ I VA+L
Sbjct: 338 GQARKCFQLFD-------------------------------EMVAGGTRPNEVIFVAIL 366
Query: 329 TGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAA 388
+ C+ G LE G H Y N+ + D + + +E Y
Sbjct: 367 SACSHAGYLELG---HHYFNQ--MVTDFGIRPS-VEHYG--------------------- 399
Query: 389 SWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTM 448
C + + G+ + E +IS +P + + +LSAC + GRR F
Sbjct: 400 ------CMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKDLRRGRRAFR-- 451
Query: 449 TEVYQIQP-KLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
++ Q++P + + Y + AG +EA+ + R I + NE+
Sbjct: 452 -QLMQLEPLRGDRYKLAGQMFSSAGEKEEADNVTRFI--KENEL 492
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 294/547 (53%), Gaps = 43/547 (7%)
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
P + +A+ ++ G VH +VKT L T + N ++ +Y L FD++P
Sbjct: 40 PLLERAISTGDVLRLGRAVHARLVKTALTSHTLLSNRLVALYSRLPSSAAAVAAFDDLPH 99
Query: 152 KD----------------------------------VVSWNVSISGHVKCMRFEDAVDVF 177
K+ +VS+N +S V R +A+ V
Sbjct: 100 KNAHSYNTLLAALLRRPDTFPDALHLFDTMPADARNLVSYNTLMSSLVHHGRQAEALRVV 159
Query: 178 RRMRQ----GCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLD 232
R+ + G L D TVVS +AC ++ +E+H + +E T IM NA+++
Sbjct: 160 ARLARDRFLGPGLAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGMELTVIMANAMVN 219
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
Y K + EAR LFD++ ++ + WTSM+SGY +L++A +FD P +D V WTA+
Sbjct: 220 AYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPDKDRVAWTAL 279
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I+G+ Q D A+ LF M + P F LV++L CA+LG + +GK +H I I
Sbjct: 280 ISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACAKLGLVTRGKELHCSILRRSI 339
Query: 353 TVDAV---VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
D + AL++MY+KCG + A+ +F+ + E+D SW S++ G + NG ++L +
Sbjct: 340 GSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHNGLGKQSLAI 399
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLG 469
F +M+ G +P +TF+ VL+ACSH GLV GR +M E + ++P+ EHY ID LG
Sbjct: 400 FEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLILESM-EDHGVEPRAEHYAAFIDALG 458
Query: 470 RAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSF 529
R L+EA E I+ +P+ +GALL ACR++GN+++ E++A L K+E +S
Sbjct: 459 RNRQLEEAIEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFKLEPGNSGR 518
Query: 530 HTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+ +L+NIYA+A +W+D VR MKE G++K S IE+ + H F+ D SH E EI
Sbjct: 519 YVMLSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSLKHVFVADDMSHCEADEI 578
Query: 590 YSMLDRM 596
Y ML ++
Sbjct: 579 YEMLGKL 585
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 183/403 (45%), Gaps = 80/403 (19%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSP----DNFTYPFVFKAVGWLGEVKKG 107
L++YN L+ + G ++L + ++L R+R + P D FT V A + +
Sbjct: 136 LVSYNTLMSSLVHHGRQAEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIRAARPL 195
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMY-------------------------GVLGKICNV 142
++HG VV +G+E + N++++ Y ++ C V
Sbjct: 196 REMHGAVVVSGMELTVIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQV 255
Query: 143 KKL------FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVS 195
KKL FD MPDKD V+W ISGH + + A+++F RM +G + P +VS
Sbjct: 256 KKLDEALQVFDMMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGVS--PTTFALVS 313
Query: 196 TLSACTALKNLELGKEIH-----RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
L AC L + GKE+H R I + F + NAL+DMY KCG ++ A +F M
Sbjct: 314 VLGACAKLGLVTRGKELHCSILRRSIGSD-PFNIFIHNALVDMYSKCGDMTAAMAVFHRM 372
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
P ++ I W SMV+G+ + G L K +++A+F
Sbjct: 373 PERDFISWNSMVTGFSHNG-LGK------------------------------QSLAIFE 401
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
EM + ++P +A+LT C+ G + G+ I + ++ + A A I+ +
Sbjct: 402 EMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLILESMEDHGVEPRAEHYAAFIDALGRNR 461
Query: 371 LIEKALEIFYELREK----DAASWTSIICGLAMNGKINKALEL 409
+E+A+E +L + A SW +++ ++G I A E+
Sbjct: 462 QLEEAIEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEEV 504
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 297/539 (55%), Gaps = 45/539 (8%)
Query: 102 GEVKK-GEKVHGYVVKTGLEFDTYVCNSIMDMYGVL------------------------ 136
G+V++ G VH +VKT L T + N ++ +Y +L
Sbjct: 42 GDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSL 101
Query: 137 --------GKICNVKKLFDEMP--DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNL 186
G + + +L D MP ++VVS+N IS + R +A+ VF ++ + L
Sbjct: 102 LAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGL 161
Query: 187 -----MPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCL 240
D TVVS SAC L++ +E+H + +E T IM NA++D Y K G +
Sbjct: 162 GQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRV 221
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
+AR +FD+M ++ + WTSM++GY L+ A +FD P +D + WTA+I+G+ Q
Sbjct: 222 EDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNG 281
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD---AV 357
+ A+ LF M + P F LV+ L CA++G + +GK +HG+I I D
Sbjct: 282 EEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVF 341
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ALI+MY+KCG + A+ +F + E+D SW S++ G + NG+ ++L +F +M+
Sbjct: 342 IHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDE 401
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
+P +TF+ VL+ACSH GLV +GRR +M + + ++P+ EHY ID LGR L+EA
Sbjct: 402 VQPTYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNRQLEEA 460
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
E I+ + ++ +GALL AC ++GN+++ E++A L ++E ++S + +L+NIY
Sbjct: 461 SEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIY 520
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
++A +W+D VR MK G+RK S IE+ H F+ D SH E EIY MLD++
Sbjct: 521 SAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKL 579
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 193/439 (43%), Gaps = 78/439 (17%)
Query: 17 QQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYNLLIKAFAKKGSFRKSLL 74
+N + N L+ G L A ++ + S +++YN +I + A+ G ++L
Sbjct: 92 HKNAHSYNSLLAALAR-GRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALR 150
Query: 75 LFSKL-RERG-----VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
+F++L R+RG V+ D FT A L + + ++HG VV +G+E + N+
Sbjct: 151 VFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANA 210
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-------- 180
++D Y G++ + + +FD+M +D VSW I+G+ + +DAV VF M
Sbjct: 211 MVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAW 270
Query: 181 ----------------------RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
G ++P +VS L AC + + GKE+H +I +
Sbjct: 271 TALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILR 330
Query: 219 EL----EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
F + NAL+DMY KCG + A +FD M +++I W SMV+G+ + GQ +++
Sbjct: 331 RSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQS 390
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
+F+R M+ VQ P +A+LT C+
Sbjct: 391 LAVFER-----------MLKDEVQ--------------------PTYVTFLAVLTACSHA 419
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK----DAASW 390
G + G+ I + ++ + A A I+ + +E+A E L K SW
Sbjct: 420 GLVSDGRRILESMQDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSW 479
Query: 391 TSIICGLAMNGKINKALEL 409
+++ ++G I A E+
Sbjct: 480 GALLGACHVHGNIEIAEEV 498
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 313/559 (55%), Gaps = 18/559 (3%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
N+ A+ +F ++ +YN +I ++++ K+LLLF +L G+ D + VF+
Sbjct: 289 NMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 348
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A + + +G +++ +K+ L D V N+ +DMYG + ++FDEM +D VS
Sbjct: 349 ACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 408
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN I+ H + + + + +F M + + PDE T S L ACT +L G EIH I
Sbjct: 409 WNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSVLKACTG-GSLGYGMEIHSSI 466
Query: 217 NQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ + +G +L+DMY KCG + EA ++ + + G +E+
Sbjct: 467 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVS-----------GTMEELE 515
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+ ++ V W ++I+GYV + ++A LF M + + PDKF +L CA L
Sbjct: 516 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 575
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
+ GK IH + + + D +++ L++MY+KCG + + +F + +D +W ++IC
Sbjct: 576 SAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 635
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A +GK +A++LF +MI KP+ +TFI +L AC+H GL+D+G +F M Y +
Sbjct: 636 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 695
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY-GNVDMGEK 514
P+L HY ++D+LG++G + A ELIR++P E +++I + LL C I+ NV++ E+
Sbjct: 696 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVI---WRTLLGVCTIHRNNVEVAEE 752
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
A L +++ +DSS +TLL+N+YA A WE V+++R+ M+ ++K PGCS +E+ +H
Sbjct: 753 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELH 812
Query: 575 EFLVGDPSHSEMKEIYSML 593
FLVGD +H +EIY L
Sbjct: 813 VFLVGDKAHPRWEEIYEEL 831
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 241/529 (45%), Gaps = 55/529 (10%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ N++ A F + ++++N ++ + + G KS+ +F + G D T+
Sbjct: 82 YAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTF 141
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ K L + G ++HG VV+ G + D ++++DMY + ++F +P+
Sbjct: 142 AIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 201
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K+ VSW+ I+G V+ A+ F+ M Q N + S L +C AL L LG +
Sbjct: 202 KNSVSWSAIIAGCVQNNLLSLALKFFKEM-QKVNAGVSQSIYASVLRSCAALSELRLGGQ 260
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H + + + I+ A LDMY KC
Sbjct: 261 LHAHALKSDFAADGIVRTATLDMYAKCD-------------------------------N 289
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
++ A+ LFD+S + + AMI GY Q +A+ LF + L D+ L +
Sbjct: 290 MQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 349
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA + L +G I+ ++ +++D VA A I+MY KC + +A +F E+R +DA SW
Sbjct: 350 CALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 409
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+II NGK + L LF M+ +PD+ TF VL AC+ GG + G +++
Sbjct: 410 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSI-- 466
Query: 451 VYQIQPKLEHYGC-LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
V GC LID+ + G+++EAE++ + N + G +
Sbjct: 467 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTN---------------VSGTM 511
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+ EK+ ++++ S++++++ Y + ED + +M EMG+
Sbjct: 512 EELEKMHN--KRLQEMCVSWNSIISG-YVMKEQSEDAQMLFTRMMEMGI 557
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 186/434 (42%), Gaps = 79/434 (18%)
Query: 102 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 161
G ++ G++ H +++ +G T+V N ++ +Y + +FD MP +DVVSWN I
Sbjct: 20 GALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMI 79
Query: 162 SGHVKC------------MRFED-------------------AVDVFRRM-RQGCNLMPD 189
+G+ K M D +++VF M R G D
Sbjct: 80 NGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEF--D 137
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFD 248
T L C+ L++ LG +IH + + + + +ALLDMY K E+ +F
Sbjct: 138 GRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 197
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+P KN + W +A+I G VQ N A+
Sbjct: 198 GIPEKNSVSW-------------------------------SAIIAGCVQNNLLSLALKF 226
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F+EMQ + + I ++L CA L L G +H + ++ D +V TA ++MYAK
Sbjct: 227 FKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK 286
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
C ++ A +F + + S+ ++I G + KAL LF +++S G D+I+ GV
Sbjct: 287 CDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 346
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL----IDLLGRAGLLDEA----EEL 480
AC+ + EG + ++ I+ L C+ ID+ G+ L EA +E+
Sbjct: 347 FRACALVKGLSEGLQIYD-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 401
Query: 481 IRKIPNENNEIIVP 494
R+ N II
Sbjct: 402 RRRDAVSWNAIIAA 415
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 117/235 (49%), Gaps = 1/235 (0%)
Query: 200 CTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
C LELGK+ H + I T + N LL +Y A +FD MP ++V+ W
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
M++GY + KA F+ PVRD+V W +M++GY+Q +++ +F +M +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
D +L C+ L G IHG + D V A+AL++MYAK ++L +
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 379 FYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
F + EK++ SW++II G N ++ AL+ F +M A + VL +C+
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 64/289 (22%)
Query: 321 KFILVALLTGCAQLGALEQGKWIHG--------------------YINE----------N 350
+F+ + CA+ GALE GK H Y N +
Sbjct: 6 RFLRMNRAVECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFD 65
Query: 351 RITV-DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
R+ + D V +I YAK + KA F + +D SW S++ G NG+ K++E+
Sbjct: 66 RMPLRDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEV 125
Query: 410 FSQMISGGAKPDDITFIGVLSACS-----------HG---------------GLVD---E 440
F M G + D TF +L CS HG L+D +
Sbjct: 126 FVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAK 185
Query: 441 GRRFFNTMTEVYQIQPKLE--HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
G+RF ++ V+Q P+ + +I + LL A + +++ N + +Y +
Sbjct: 186 GKRFVESL-RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYAS 244
Query: 499 LLSACRIYGNVDMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDV 546
+L +C + +G +L A K + + D T ++YA + +D
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 293
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 275/490 (56%), Gaps = 19/490 (3%)
Query: 72 SLLLFSKLRERGVSP--DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
SLL S L R + NFT PF K ++H +++KT + + +
Sbjct: 6 SLLHVSPLHHRPSTHLLHNFTSPFELK------------QLHAHLLKTNSPLSSLPLSRV 53
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+ K +F + +V WN + + DA+ +F R+R+ ++ PD
Sbjct: 54 ASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLRE-FDISPD 112
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFD 248
T L AC+ L ++ GK +H Y+ + L+ + N ++ +Y CG + AR++FD
Sbjct: 113 HYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFD 172
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+MP ++VI W M++ V G E A LF P R++ WT+MI GY Q + EA+ L
Sbjct: 173 KMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDL 232
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F EM+ L P++ +VA+L CA +G L G+ IH + N + + V LI+MY K
Sbjct: 233 FLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVK 292
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
CG +E A IF + E+ SW+++I GLA +G+ AL LF++MI+ G KP+ +TFIG+
Sbjct: 293 CGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGI 352
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L ACSH G+V++GR++F +MT Y I P++EHYGC++DL RAGLL EA E I +P
Sbjct: 353 LHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAP 412
Query: 489 NEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTN 548
N ++ +GALL C+++ NV + E+ L K++ + ++ +L+NIYA A RWEDV
Sbjct: 413 NGVV---WGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVAR 469
Query: 549 VRQKMKEMGV 558
VR+ M++ G
Sbjct: 470 VRKLMRDRGT 479
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 220/440 (50%), Gaps = 68/440 (15%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+LKQ+ A + + + L+++ C S + YA+ IF + + + +N +++
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFNS--SFSYAKLIFQLLDASEVTHWNTCLRS 87
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
FA+ S ++ LF +LRE +SPD++T FV KA L +V+ G+ VHGYV K GL+ +
Sbjct: 88 FAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS-------------------- 162
++ N I+ +Y + G+I +K+FD+MP +DV++WN+ I+
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207
Query: 163 -----------GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
G+ +C + ++A+D+F M + L+P+E TVV+ L AC + NL LG+
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEM-EDAGLLPNEVTVVAVLVACADMGNLVLGRR 266
Query: 212 IHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH + N+ E + N L+DMY KCGCL +A +FD M + V+ W++M++G G
Sbjct: 267 IHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG- 325
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
R ++A+ALF +M +KP+ + +L
Sbjct: 326 ------------------------------RAEDALALFNKMINTGVKPNAVTFIGILHA 355
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELR-EKDAA 388
C+ +G +E+G+ + + V + +++++++ GL+++A E + +
Sbjct: 356 CSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGV 415
Query: 389 SWTSIICGLAMNGKINKALE 408
W +++ G ++ + A E
Sbjct: 416 VWGALLGGCKVHKNVKLAEE 435
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 305/542 (56%), Gaps = 42/542 (7%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNF---TYPFVFKAVGWLGEVKKGEKVHGY 113
N LI+ F+++G +S L + VSP F Y + E +G+ +H
Sbjct: 6 NFLIQ-FSRRGFSVQSAKLTQEFVGH-VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63
Query: 114 VVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDA 173
++K G D + N +++MY +C+ KLFDEMP+++ +S+ I G+ + +RF +A
Sbjct: 64 ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEA 123
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLD 232
+++F R+ + ++P++ T S L AC ++ L LG +IH I L + NAL+D
Sbjct: 124 IELFVRLHR--EVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 181
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
+Y KC G++E + +LF SP R+ V W +
Sbjct: 182 VYAKC-------------------------------GRMENSMELFAESPHRNDVTWNTV 210
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I G+VQ ++A+ LF M R++ + + L CA L ALE G IH +
Sbjct: 211 IVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTF 270
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
D VV ALI+MYAKCG I+ A +F + ++D SW ++I G +M+G +AL +F +
Sbjct: 271 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDK 330
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M KPD +TF+GVLSAC++ GL+D+G+ +F +M + + I+P +EHY C++ LLGR G
Sbjct: 331 MQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGG 390
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
LD+A +LI +IP + + V ++ ALL AC I+ ++++G A + ++E +D + H L
Sbjct: 391 HLDKAVKLIDEIPFQPS---VMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVL 447
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+N+YA+A RW++V +VR+ MK GV+K PG S IE G +H F VGD SH E++ I M
Sbjct: 448 LSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGM 507
Query: 593 LD 594
L+
Sbjct: 508 LE 509
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 174/344 (50%), Gaps = 35/344 (10%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + +++ LI+ +A+ F +++ LF +L R V P+ FT+ V +A
Sbjct: 92 ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACAT 150
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ + G ++H +V+K GL D +V N++MD+Y G++ N +LF E P ++ V+WN
Sbjct: 151 MEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTV 210
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQE 219
I GHV+ E A+ +F M + + E T S L AC +L LE G +IH +
Sbjct: 211 IVGHVQLGDGEKALRLFLNMLE-YRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTT 269
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+ ++ NAL+DMY KCG + +AR +FD M ++ + W +M+SGY G +A +FD
Sbjct: 270 FDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFD 329
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
+ MQ +KPDK V +L+ CA G L+Q
Sbjct: 330 K-------------------------------MQETEVKPDKLTFVGVLSACANAGLLDQ 358
Query: 340 GK-WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
G+ + I ++ I T ++ + + G ++KA+++ E+
Sbjct: 359 GQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI 402
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + +++N +I ++ G R++L +F K++E V PD T+ V
Sbjct: 288 GSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVL 347
Query: 96 KAVGWLGEVKKGEKVHGYVVKT-GLE--FDTYVCNSIMDMYGVLGKICNVKKLFDEMP-D 151
A G + +G+ +++ G+E + Y C ++ + G G + KL DE+P
Sbjct: 348 SACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTC--MVWLLGRGGHLDKAVKLIDEIPFQ 405
Query: 152 KDVVSW 157
V+ W
Sbjct: 406 PSVMVW 411
>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 299/504 (59%), Gaps = 19/504 (3%)
Query: 104 VKKGEKVHGYVVKTGLEF--DTYVCNSIMDMYGVLGKICNVKKLFDEMP--DKDVVSWNV 159
++ G+++H + +GL+ +Y+ N++ Y G++ +KLFDE+P +KD V W
Sbjct: 22 LRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTT 81
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE 219
+S + +++ +F MR+ + D+ +VV C L++L ++ H +
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRK-RVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM 140
Query: 220 LEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
T + + NAL+DMY KCG +SE + +F+E+ K+V+ WT ++ V LE+ R++F
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI-LVALLTGCAQLGAL 337
P R+ V WT M+ GY+ E + L EM F+ L ++L+ CAQ G L
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL 260
Query: 338 EQGKWIHGY-------INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
G+W+H Y + E D +V TAL++MYAKCG I+ ++ +F +R+++ +W
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
++ GLAM+GK +++F QMI KPDD+TF VLSACSH G+VDEG R F+++
Sbjct: 321 NALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-R 378
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
Y ++PK++HY C++DLLGRAGL++EAE L+R++P NE+++ G+LL +C ++G V+
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVL---GSLLGSCSVHGKVE 435
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
+ E++ L ++ ++ + L++N+Y + R + +R +++ G+RK+PG SSI +N
Sbjct: 436 IAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVN 495
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLD 594
+H F GD SH KEIY L+
Sbjct: 496 DSVHRFSSGDRSHPRTKEIYLKLN 519
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 205/457 (44%), Gaps = 84/457 (18%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYNLLIKA 62
K++ A + GL++ P + +F + S G ++ A+K+F I + + L+ +
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
F++ G S+ LF ++R + V D+ + +F L ++ ++ HG VK G+
Sbjct: 86 FSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTS 145
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-- 180
VCN++MDMYG G + VK++F+E+ +K VVSW V + VK E +VF M
Sbjct: 146 VKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPE 205
Query: 181 -------------------RQGCNLMPD------EG----TVVSTLSACTALKNLELGKE 211
R+ L+ + G T+ S LSAC NL +G+
Sbjct: 206 RNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRW 265
Query: 212 IHRY-------INQELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
+H Y + +E + +M G AL+DMY KCG + + +F M +NV+ W ++ S
Sbjct: 266 VHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFS 325
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKF 322
G G K R + D P Q+IR +KPD
Sbjct: 326 GLAMHG---KGRMVIDMFP------------------------------QMIREVKPDDL 352
Query: 323 ILVALLTGCAQLGALEQG-KWIHG---YINENRITVDAVVATALIEMYAKCGLIEKALEI 378
A+L+ C+ G +++G + H Y E ++ A ++++ + GLIE+A +
Sbjct: 353 TFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYA----CMVDLLGRAGLIEEAEIL 408
Query: 379 FYELR-EKDAASWTSIICGLAMNGKINKALELFSQMI 414
E+ + S++ +++GK+ A + ++I
Sbjct: 409 MREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELI 445
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 296/549 (53%), Gaps = 36/549 (6%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N ++ AK+ F ++L L+ ++ G P+ FT+PF K+ L G + HG +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE--MPDKDVVSWNVSISGHVKCMRFEDA 173
K G F+ +V ++ MY + N +K+F+E K V +N +SG+V + +A
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDM 233
V +FR+M + + + T++ + AC + NLELG +H
Sbjct: 137 VLLFRQMNEE-GVPVNSVTLLGLIPACVSPINLELGSSLH-------------------- 175
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
C L FD +V ++ Y+ CG + A+ LFD PV+ ++ W AM+
Sbjct: 176 ---CSTLKYG---FDS----DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMV 225
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+GY Q + L+R M + + PD LV +L+ CA LGA G + I + T
Sbjct: 226 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFT 285
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ + ALI MYA+CG + KA +F + E+ SWT+II G M+G A++LF +M
Sbjct: 286 SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEM 345
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
I G +PD F+ VLSACSH GL D+G +F M YQ++P EHY C++DLLGRAG
Sbjct: 346 IRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGR 405
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA+ LI +P + + + +GALL AC+I+ NV++ E + ++E ++ ++ LL
Sbjct: 406 LKEAQTLIESMPIKPDGAV---WGALLGACKIHKNVELAELAFERVIELEPENIGYYVLL 462
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIY++AN + V +R MKE ++K PGCS +E+ G +H F+VGD +H + EIY +L
Sbjct: 463 SNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVL 522
Query: 594 DRMAKTLLD 602
+ + ++
Sbjct: 523 EELEAIIMQ 531
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 203/433 (46%), Gaps = 47/433 (10%)
Query: 6 QIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLL-YAEKIFG-SIQSPCL-LAYNLLIK 61
Q QI ++G P L+ ++C G+L+ A K+F + S L + YN L+
Sbjct: 70 QFHGQITKVGCVFEPFVQTGLISMYCK----GSLVDNARKVFEENFHSRKLTVCYNALVS 125
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ +++LLF ++ E GV ++ T + A ++ G +H +K G +
Sbjct: 126 GYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDS 185
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D V N + MY G + +KLFDEMP K ++SWN +SG+ + + ++++R M
Sbjct: 186 DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD 245
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFT--PIMGNALLDMYCKCGC 239
+ PD T+V LS+C L +G E+ I Q FT P + NAL++MY +CG
Sbjct: 246 MN-GVHPDPVTLVGVLSSCANLGAQSVGHEVEFKI-QASGFTSNPFLNNALINMYARCGN 303
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L++A+ +FD MP + ++ WT+++ GY G E
Sbjct: 304 LTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEI-------------------------- 337
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVV 358
AV LF+EM ++PD V +L+ C+ G +QG + N ++
Sbjct: 338 -----AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 392
Query: 359 ATALIEMYAKCGLIEKALEIFYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ ++++ + G +++A + + K D A W +++ ++ + A F ++I
Sbjct: 393 YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE-- 450
Query: 418 AKPDDITFIGVLS 430
+P++I + +LS
Sbjct: 451 LEPENIGYYVLLS 463
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 324/605 (53%), Gaps = 49/605 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A + G + N +N L+ + G L ++ + GS + L+ +N ++ +
Sbjct: 218 KQVHAYGLRKG-ELNSFIINTLVAM--YGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLC 274
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDT 123
+ F ++L ++ GV PD FT V A L ++ G+++H Y +K G L+ ++
Sbjct: 275 QNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 334
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V ++++DMY ++ + ++FD M D+ + WN I+G+ + E+A+ +F M +
Sbjct: 335 FVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEES 394
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
L+ + T+ + AC + IH ++ + L+ + NAL+DMY + G +
Sbjct: 395 AGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDI 454
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A+ +F +M + RD+V W +I GYV R
Sbjct: 455 AKRIFGKMED-------------------------------RDLVTWNTIITGYVFSERH 483
Query: 303 DEAVALFREMQI-----------IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
++A+ + +MQI + LKP+ L+ +L CA L AL +GK IH Y +N
Sbjct: 484 EDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 543
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ D V +AL++MYAKCG ++ + ++F ++ ++ +W I+ M+G A+++
Sbjct: 544 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLR 603
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
M+ G KP+++TFI V +ACSH G+V+EG + F M + Y ++P +HY C++DLLGRA
Sbjct: 604 MMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRA 663
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G + EA +LI IP ++ + +LL ACRI+ N+++GE A L ++E +S +
Sbjct: 664 GRVKEAYQLINLIPRNFDK--AGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYV 721
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LLANIY+SA W T VR+ MK GVRK PGCS IE +H+F+ GD SH + +++
Sbjct: 722 LLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRG 781
Query: 592 MLDRM 596
L+ +
Sbjct: 782 YLETL 786
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 236/518 (45%), Gaps = 65/518 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI A +++ G + T+ +V + G+ K+F I +++N LI +
Sbjct: 113 KQIHAHVYKFGYGVDSVTVANTLV-NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 171
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKK---GEKVHGYVVKTGLEF 121
+ +L F + + V P +FT V A + G++VH Y ++ G E
Sbjct: 172 SFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-EL 230
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
++++ N+++ MYG +GK+ + K L +D+V+WN +S + +F +A++ R M
Sbjct: 231 NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMV 290
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCG 238
+G PD T+ S L AC+ L+ L GKE+H Y N L+ +G+AL+DMYC
Sbjct: 291 LEGVE--PDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC--- 345
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
NC Q+ +FD R I LW AMI GY Q
Sbjct: 346 ----------------------------NCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQ 377
Query: 299 FNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+EA+ LF EM+ L + + ++ C + GA + + IHG++ + + D
Sbjct: 378 NEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRF 437
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM---- 413
V AL++MY++ G I+ A IF ++ ++D +W +II G + + AL + +M
Sbjct: 438 VQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILE 497
Query: 414 -------ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----YG 462
KP+ IT + +L +C+ + +G+ Y I+ L
Sbjct: 498 RKASERASRVSLKPNSITLMTILPSCAALSALAKGKEI-----HAYAIKNNLATDVAVGS 552
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENN---EIIVPLYG 497
L+D+ + G L + ++ +IP N +IV YG
Sbjct: 553 ALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYG 590
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 208/436 (47%), Gaps = 39/436 (8%)
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
L+++ + R+++L + + G+ PDNF +P + KAV L ++ G+++H +V K G
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123
Query: 119 LEFDTY-VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
D+ V N+++++Y G V K+FD + +++ VSWN IS ++E A++ F
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTAL---KNLELGKEIHRYINQELEFTPIMGNALLDMY 234
R M ++ P T+VS AC+ + L +GK++H Y ++ E + N L+ MY
Sbjct: 184 RCMLDE-DVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVAMY 242
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMIN 294
K G L+ ++ L G E RD+V W +++
Sbjct: 243 GKMGKLASSKVLL---------------------GSFEG----------RDLVTWNTVLS 271
Query: 295 GYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RIT 353
Q +F EA+ REM + ++PD F + ++L C+ L L GK +H Y +N +
Sbjct: 272 SLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 331
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
++ V +AL++MY C + +F + ++ W ++I G A N +AL LF +M
Sbjct: 332 ENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEM 391
Query: 414 -ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
S G + T GV+ AC G + + + + + L+D+ R G
Sbjct: 392 EESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQ-NALMDMYSRLG 450
Query: 473 LLDEAEELIRKIPNEN 488
+D A+ + K+ + +
Sbjct: 451 KIDIAKRIFGKMEDRD 466
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W ++ V+ N EAV + +M ++ +KPD F ALL A L ++ GK IH ++
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 349 ENRITVDAV-VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ VD+V VA L+ +Y KCG ++F + E++ SW S+I L K AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSH 434
E F M+ +P T + V ACS+
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSN 207
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 205/659 (31%), Positives = 334/659 (50%), Gaps = 101/659 (15%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q+K++ +I I NPET + T+ G+L A +F I P L ++N L+
Sbjct: 22 AQVKKLHCRI--IRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLS 79
Query: 62 AFAKKGSFRKSLLLFSK--------------------------------LRERGVSPDNF 89
A++K G + +F L++ V+ +
Sbjct: 80 AYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRI 139
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+ + G V G ++HG + K G + +V + ++DMY G I + ++F+E+
Sbjct: 140 TFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEI 199
Query: 150 PDKDVVSWNVSISGHVKCM-------------------------------RFEDAVDVFR 178
P+K++V +N I+G ++C F++AVD F+
Sbjct: 200 PEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFK 259
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKC 237
M M D+ T S L+AC L+ GK+IH YI + + +G+ALLDMYCKC
Sbjct: 260 EMGIEGFCM-DQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKC 318
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
+ A +F +M +KN ++ WTAM+ GY
Sbjct: 319 RNVKYAEAVFRKMRHKN-------------------------------VISWTAMLVGYG 347
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
Q +EAV +F +MQ + PD F L ++++ CA L +LE+G HG + +
Sbjct: 348 QNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVT 407
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V+ ALI +Y KCG +E A ++F+E++ +D SWT+++ G A GK N+ + LF M++ G
Sbjct: 408 VSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHG 467
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
PD +TF+GVLSACS GLV++G +F M + ++I P +HY C+IDLL RAG L+EA
Sbjct: 468 IVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEA 527
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
+ I ++P + I + LLS+CR+ GN+++G+ A L K+E ++ + + LL++IY
Sbjct: 528 KNFINQMPFSPDAI---GWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIY 584
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
A+ +W+DV +R+ M+EMGV+K PG S I+ +H F D S +IY+ L+ +
Sbjct: 585 AAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESL 643
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 146/328 (44%), Gaps = 34/328 (10%)
Query: 194 VSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
+ L C +N K++H R I + N L++ Y K G L AR +FD +P
Sbjct: 9 TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
N+ W +++S Y G L+ + +FD P D+V W ++++GY E+V ++ M
Sbjct: 69 PNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMM 128
Query: 313 -QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
+ + ++ +L + G ++ G+ IHG I + V + L++MYAK G
Sbjct: 129 LKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGF 188
Query: 372 IEKALEIFYE-------------------------------LREKDAASWTSIICGLAMN 400
I A IF E + EKD+ SWT+II GL N
Sbjct: 189 INDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN 248
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH 460
G +A++ F +M G D TF VL+AC +DEG++ + Q +
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRT-DYQDNIFV 307
Query: 461 YGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L+D+ + + AE + RK+ ++N
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKN 335
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 311/595 (52%), Gaps = 75/595 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQ+ A + + GL +P KL++ L YA ++F +P + +N LI
Sbjct: 18 LKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLI 77
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSP-DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A+ + + SL+ F ++R R +P D+F++ F+ KA ++ G ++H + GL
Sbjct: 78 RGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGL 137
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ +V +++ MY G + KK+F+EM + +VV+WN ++ +C + A +F R
Sbjct: 138 DTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNR 197
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
M +NL N +L Y K G
Sbjct: 198 M---------------------PFRNL------------------TSWNVMLAGYTKAGE 218
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L AR+LF EMP K+ + W++M+ G+ + NG+
Sbjct: 219 LELARKLFLEMPVKDDVSWSTMIVGFAH--------------------------NGF--- 249
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
F EA FRE+Q + ++P++ L L+ CA GA+E GK +HG+I ++ V
Sbjct: 250 --FYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVN 307
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDA-ASWTSIICGLAMNGKINKALELFSQMISGGA 418
AL++ Y+KCG + A +F + EK + SWTS+I GLAM+G +A++LF +M G
Sbjct: 308 NALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGI 367
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PD I FI +L ACSH GL+++G +F M ++Y I+P +EHYGC++DL GRAG LD+A
Sbjct: 368 RPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAY 427
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E I +P II + LL AC I+GNV + E++ L +++ +S H LL+NIYA
Sbjct: 428 EFIIHMPVLPTAII---WRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYA 484
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
A +W+DV VR+ M + + K PG S IE++ I++ F+ G+ +S +E Y L
Sbjct: 485 VAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKL 539
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/493 (35%), Positives = 295/493 (59%), Gaps = 21/493 (4%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H +++T + D +V ++ + L I +F + + +V + I G V R
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSIDYAYDVFRYVSNPNVYLYTAMIDGFVSSGR 107
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMG 227
D V ++ RM +++PD + S L AC L+ +EIH + +L F + +G
Sbjct: 108 SADGVSLYHRMIHS-SVLPDNYVITSVLKAC----GLDECREIHSQV-LKLGFGSSRSVG 161
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
L+++Y K G L++A+++FDEMP+++ + T M++ Y CG +++A +LF ++D V
Sbjct: 162 LKLMEIYGKSGELADAKKVFDEMPDRDQVVATVMINCYSECGCIKEALELFQDVKIKDTV 221
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
WTAMI+G V+ ++A+ LFREMQ+ I V +G +H ++
Sbjct: 222 CWTAMIDGLVRNREMNKALELFREMQLSVFYLPARIWVRWSSGAG----------VHSFV 271
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
++ + V ALI MY++CG I A +F +R+KD S+ ++I GLAM+G +A+
Sbjct: 272 ENQKMELSNFVGNALINMYSRCGDINVAKRVFKGMRDKDVISYNTMISGLAMHGASVEAI 331
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+F M++ G +P+ +T + +L+ACSHGGL+D G FN+M V+ ++P++EHYGC++DL
Sbjct: 332 NVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVFSVEPQIEHYGCIVDL 391
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGR G L+EA I + E + I++ GALLSAC+I+GN+++GEK+A L + E+ DS
Sbjct: 392 LGRVGRLEEAYRFIENMLIEPDHIML---GALLSACKIHGNMELGEKIAKRLFESENPDS 448
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ LL++IYAS+ +W++ T +R+ M+E G+ K PGCS+IE++ IHEF VGD +H +
Sbjct: 449 GTYVLLSHIYASSGKWKESTEIRESMRESGIEKEPGCSTIEVDNQIHEFHVGDIAHPRKE 508
Query: 588 EIYSMLDRMAKTL 600
IY L + + L
Sbjct: 509 AIYQRLQELNRNL 521
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 203/445 (45%), Gaps = 73/445 (16%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
Q+ I A+I + Q+ + +L+ C+ + ++ YA +F + +P + Y +I
Sbjct: 43 AQVPSIHAKIIRTFHDQDAFVVFELIRVCS--TLDSIDYAYDVFRYVSNPNVYLYTAMID 100
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
F G + L+ ++ V PDN+ V KA G L E ++ +H V+K G
Sbjct: 101 GFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKACG-LDECRE---IHSQVLKLGFGS 156
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF---- 177
V +M++YG G++ + KK+FDEMPD+D V V I+ + +C ++A+++F
Sbjct: 157 SRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVATVMINCYSECGCIKEALELFQDVK 216
Query: 178 -----------------RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQE 219
R M + L + V L A ++ G +H ++ NQ+
Sbjct: 217 IKDTVCWTAMIDGLVRNREMNKALELFREMQLSVFYLPARIWVR-WSSGAGVHSFVENQK 275
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA----R 275
+E + +GNAL++MY +CG ++ A+ +F M +K+VI + +M+SG G +A R
Sbjct: 276 MELSNFVGNALINMYSRCGDINVAKRVFKGMRDKDVISYNTMISGLAMHGASVEAINVFR 335
Query: 276 DLFDRSPVRDIVLWTAMIN----------GYVQFN------------------------- 300
D+ +R + V A++N G FN
Sbjct: 336 DMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVFSVEPQIEHYGCIVDLLGRV 395
Query: 301 -RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
R +EA +R ++ + ++PD +L ALL+ C G +E G+ I + E+ D+
Sbjct: 396 GRLEEA---YRFIENMLIEPDHIMLGALLSACKIHGNMELGEKIAKRLFESE-NPDSGTY 451
Query: 360 TALIEMYAKCGLIEKALEIFYELRE 384
L +YA G +++ EI +RE
Sbjct: 452 VLLSHIYASSGKWKESTEIRESMRE 476
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 214/675 (31%), Positives = 343/675 (50%), Gaps = 83/675 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCL--LAYNLLIKA 62
+ + A+I + G + N + +H L +A +F SI +++N LI A
Sbjct: 31 RTLHARILKTGSISSIYVTNTFLNLYAKTNH--LSHALTLFDSINDNDKDDVSWNSLINA 88
Query: 63 FAKKGSFRK---SLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
F++ S ++ LF ++ R V P+ T VF A L +V G++ H VKTG
Sbjct: 89 FSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTG 148
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
D YV +S+++MY G + + +KLFD MP+++ VSW ISG+ + AV+VF
Sbjct: 149 CSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFE 208
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDM---- 233
MR+ + +E + S LSA T+ + G+++H I L + NAL+ M
Sbjct: 209 LMRREEEIQ-NEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKC 267
Query: 234 ---------------------------YCKCGCLSEARELFDEMPNKNVI---------- 256
Y + G +A +LF++M + V+
Sbjct: 268 GSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVI 327
Query: 257 -----------------------------CWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
+++V Y CG L AR F+ D+V
Sbjct: 328 NACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVV 387
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
LWT++I GYVQ ++ + L+ +MQ+ R+ P++ + ++L C+ L AL+QGK +H I
Sbjct: 388 LWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARI 447
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ ++ + +AL MY KCG ++ IF+ + +D SW ++I GL+ NG NKAL
Sbjct: 448 IKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKAL 507
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
ELF +M+ G KPD +TF+ +LSACSH GLVD G +F M + + I P +EHY C++D+
Sbjct: 508 ELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDI 567
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
L RAG L+EA+E I ++ + L+ LL AC+ + N ++G L ++ S +S
Sbjct: 568 LSRAGKLNEAKEFIESATVDHG---LCLWRILLGACKNHRNYELGVYAGEKLVELGSPES 624
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
S + LL++IY + E+V VR+ MK GV K PGCS IE+ G++H F+VGD H ++
Sbjct: 625 SAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVD 684
Query: 588 EIYSMLDRMAKTLLD 602
EI L+ + K ++D
Sbjct: 685 EIRLELELLTKLMID 699
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 190/384 (49%), Gaps = 42/384 (10%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD--KDVVSWNVSI 161
+ KG +H ++KTG YV N+ +++Y + + LFD + D KD VSWN I
Sbjct: 27 ILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLI 86
Query: 162 SGHVKCMRFED---AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-IN 217
+ + A+ +FRRM + N++P+ T+ SA + L ++ GK+ H +
Sbjct: 87 NAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVK 146
Query: 218 QELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+G++LL+MYCK G + FD AR L
Sbjct: 147 TGCSGDVYVGSSLLNMYCKTGFV------FD-------------------------ARKL 175
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
FDR P R+ V W MI+GY + D+AV +F M+ ++F L ++L+ +
Sbjct: 176 FDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFV 235
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
G+ +H +N + VA AL+ MYAKCG ++ A+ F +K++ +W++++ G
Sbjct: 236 YTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGY 295
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
A G +KAL+LF++M S G P + T +GV++ACS V EG++ + +++
Sbjct: 296 AQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSF---AFKLGFG 352
Query: 458 LEHY--GCLIDLLGRAGLLDEAEE 479
L+ Y ++D+ + G L +A +
Sbjct: 353 LQLYVLSAVVDMYAKCGSLADARK 376
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 311/566 (54%), Gaps = 42/566 (7%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFV 94
G + A K+F Q P + + ++ + + ++L LFS++ V D T V
Sbjct: 153 GQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSV 212
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A L VK G VHG V++ + D + NS++++Y G LF +MP+KDV
Sbjct: 213 VSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDV 272
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
+SW+ I+ + +A+++F M + P+ TVVS L AC +NLE GK+IH+
Sbjct: 273 ISWSTMIACYANNEAANEALNLFHEMIEK-RFEPNSVTVVSALQACAVSRNLEEGKKIHK 331
Query: 215 ---YINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
+ EL+F+ + AL+DMY KC C E
Sbjct: 332 IAVWKGFELDFS--VSTALIDMYMKCSCPDE----------------------------- 360
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
A DLF R P +D+V W A+++GY Q +++ +FR M ++PD +V +L
Sbjct: 361 --AVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAAS 418
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
++LG +Q +HGY+ + + V +LIE+Y+KCG + A+++F + +D W+
Sbjct: 419 SELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWS 478
Query: 392 SIICGLAMNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
S+I ++G+ +ALE+F QM+ +P+++TF+ +LSACSH GLV+EG + F+ M
Sbjct: 479 SMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVH 538
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVD 510
YQ++P EH+G ++DLLGR G L +A ++I ++P + +GALL ACRI+ N++
Sbjct: 539 DYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHV---WGALLGACRIHHNIE 595
Query: 511 MGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
MGE A L ++ + ++ LL+NIYA +W++V +R ++KE G++K+ G S +E+
Sbjct: 596 MGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVR 655
Query: 571 GIIHEFLVGDPSHSEMKEIYSMLDRM 596
G +H FL D H + ++IY +L ++
Sbjct: 656 GGVHSFLASDRFHPDSQKIYELLRKL 681
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 279/493 (56%), Gaps = 34/493 (6%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+K H + GL++D+ + MY +I +F+++P+ WNV I G
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG 227
RF +++++ +M + L PD+ L +C L +L+ GK IH++
Sbjct: 797 GRFLSSLELYSKMMEK-GLKPDKFAFPFALKSCAGLSDLQRGKVIHQH------------ 843
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
+ C CGC + +LF + ++V Y CG +E AR +FD+ VRD+V
Sbjct: 844 -----LVC-CGC---SNDLFVD---------AALVDMYAKCGDIEAARLVFDKMAVRDLV 885
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
WT+MI+GY E + F M+ + P++ ++++L C LGAL +G+W H Y+
Sbjct: 886 SWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYV 945
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
+ D +VATA+++MY+KCG ++ A +F E KD W+++I ++G KA+
Sbjct: 946 IQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAI 1005
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+LF QM+ G +P +TF VLSACSH GL++EG+ +F MTE + I KL +Y C++DL
Sbjct: 1006 DLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDL 1065
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG L EA +LI +P E + I +G+LL ACRI+ N+D+ EK+A L ++ +
Sbjct: 1066 LGRAGQLSEAVDLIENMPVEPDASI---WGSLLGACRIHNNLDLAEKIADHLFHLDPVHA 1122
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+H LL+NIYA+ +RW +V VR+ M G K+ G S +E + +H+F VGD SH + +
Sbjct: 1123 GYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWE 1182
Query: 588 EIYSMLDRMAKTL 600
++Y+ L+ +A +
Sbjct: 1183 KLYAKLEELAAPM 1195
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 251/519 (48%), Gaps = 63/519 (12%)
Query: 3 QLKQIQAQIFQIGLQQN---PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ Q+ +Q+F+ G+ + LN L C +L A K+F P + +N
Sbjct: 19 SVSQLHSQVFKTGILHDTFFATKLNSLYAKC-----ASLQAARKVFDETPHPNVHLWNST 73
Query: 60 IKAFAKKGSFRKSLLLFS-KLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
++++ ++ + ++L LF + G +PDNFT P KA L ++ G+ +HG+ K
Sbjct: 74 LRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKND 133
Query: 119 -LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
+ D +V ++++++Y G++ K+F+E D V W ++G+ + E+A+ +F
Sbjct: 134 EIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALF 193
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
+M ++ D T+VS +SAC L N++ G +H I +E + + N+LL++Y K
Sbjct: 194 SQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAK 253
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
GC A LF +M P +D++ W+ MI Y
Sbjct: 254 TGCEKIAANLFSKM-------------------------------PEKDVISWSTMIACY 282
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
+EA+ LF EM R +P+ +V+ L CA LE+GK IH +D
Sbjct: 283 ANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDF 342
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+TALI+MY KC ++A+++F L +KD SW +++ G A NG K++ +F M+S
Sbjct: 343 SVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSD 402
Query: 417 GAKPDDITFIGVLSACSHGGLVDEG--------RRFFNTMTEVYQIQPKLEHYGCLIDLL 468
G +PD + + +L+A S G+ + R FN+ V LI+L
Sbjct: 403 GIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFV---------GASLIELY 453
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYG 507
+ G L +A +L + + + V ++ ++++A I+G
Sbjct: 454 SKCGSLGDAVKLFKGMIVRD----VVIWSSMIAAYGIHG 488
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 203/406 (50%), Gaps = 37/406 (9%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
LK+ A+IF GLQ + L K + + S + A +F I +PC +N++I+ F
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIM--YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGF 793
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
A G F SL L+SK+ E+G+ PD F +PF K+ L ++++G+ +H ++V G D
Sbjct: 794 ATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDL 853
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V +++DMY G I + +FD+M +D+VSW ISG+ + + F MR
Sbjct: 854 FVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSS 913
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSE 242
++P+ +++S L AC L L G+ H Y+ Q EF ++ A++DMY KCG L
Sbjct: 914 -GVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDL 972
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
AR LFDE K+++CW++M++ Y G KA DLFD
Sbjct: 973 ARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFD----------------------- 1009
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA- 361
+M ++P +L+ C+ G LE+GK + E + + A
Sbjct: 1010 --------QMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYAC 1061
Query: 362 LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKA 406
++++ + G + +A+++ + E DA+ W S++ ++ ++ A
Sbjct: 1062 MVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLA 1107
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 199/432 (46%), Gaps = 22/432 (5%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A +F + +++++ +I +A + ++L LF ++ E+ P++ T +A
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+++G+K+H V G E D V +++DMY LF +P KDVVSW
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE- 219
+SG+ + ++ VFR M + PD VV L+A + L + +H Y+ +
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSD-GIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG 438
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
+G +L+++Y KCG L +A +LF M ++V+ W+SM++ Y G+ +A ++FD
Sbjct: 439 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFD 498
Query: 280 R----SPVR-DIVLWTAMINGYVQFNRFDEAVALF-REMQIIRLKPDK---FILVALLTG 330
+ S VR + V + ++++ +E + +F R + +L+PD I+V LL
Sbjct: 499 QMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGR 558
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALI---EMYAKCGLIEKALEIFYELREKDA 387
QLG IN I V AL+ ++ + E A + + L A
Sbjct: 559 IGQLGKAMD------IINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHA 612
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 447
+ + A++GK + EL +++ G K + + H L + RF
Sbjct: 613 GYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASD--RFHPD 670
Query: 448 MTEVYQIQPKLE 459
++Y++ KLE
Sbjct: 671 SQKIYELLRKLE 682
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Query: 307 ALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMY 366
A+ + Q I+ K+ + G + K H I + D+ + T MY
Sbjct: 703 AVLQFWQRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMY 762
Query: 367 AKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI 426
I+ A +F ++ + W +I G A +G+ +LEL+S+M+ G KPD F
Sbjct: 763 VSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFP 822
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
L +C+ GL D R I L GC DL A L+D
Sbjct: 823 FALKSCA--GLSDLQRG--------KVIHQHLVCCGCSNDLFVDAALVD 861
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 292/525 (55%), Gaps = 48/525 (9%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H +V G ++ ++++Y LG + + FD++P KDV +WN IS +V
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGN 228
F +A+ F ++ + PD T L AC L + G++IH + ++ +
Sbjct: 98 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAA 154
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG------------------------ 264
+L+ MY + G AR LFD+MP +++ W +M+SG
Sbjct: 155 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 214
Query: 265 ---------------YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
Y G L+ A +F+ PV+D++ W +I GY Q EA+ ++
Sbjct: 215 NFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY 274
Query: 310 REMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
+ M+ + + P++ V++L A +GAL+QG IHG + + + +D VAT LI++Y K
Sbjct: 275 KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGK 334
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
CG + A+ +FY++ ++ + +W +II ++G K L+LF +M+ G KPD +TF+ +
Sbjct: 335 CGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSL 394
Query: 429 LSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
LSACSH G V+EG+ F M E Y I+P L+HYGC++DLLGRAG L+ A + I+ +P +
Sbjct: 395 LSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQP 453
Query: 489 NEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTN 548
+ I +GALL ACRI+GN+++G+ + L +++SK+ ++ LL+NIYA+ +WE V
Sbjct: 454 DASI---WGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDK 510
Query: 549 VRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
VR +E G++K PG S+IE+N + F G+ SH + KEIY L
Sbjct: 511 VRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEEL 555
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 6/249 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRE-RGVSPDNFTYPFV 94
G L A K+F I ++++N LI +A+ G +++ ++ + E + + P+ T+ +
Sbjct: 234 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 293
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A +G +++G K+HG V+KT L D +V ++D+YG G++ + LF ++P +
Sbjct: 294 LPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 353
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
V+WN IS H E + +F M + PD T VS LSAC+ +E GK R
Sbjct: 354 VTWNAIISCHGIHGHAEKTLKLFGEMLDE-GVKPDHVTFVSLLSACSHSGFVEEGKWCFR 412
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+ QE P + + ++D+ + G L A + +MP + W +++ G +
Sbjct: 413 LM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNI 471
Query: 272 EKARDLFDR 280
E + DR
Sbjct: 472 ELGKFASDR 480
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/485 (36%), Positives = 285/485 (58%), Gaps = 38/485 (7%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H +++ G D ++ ++ I ++F + +V + I G V
Sbjct: 58 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNA 229
+ +A+ ++ RM +++PD + S L AC + L G+E+H A
Sbjct: 118 YLEAIQLYSRMLHE-SILPDNYLMASILKACGSQLALREGREVH-------------SRA 163
Query: 230 LLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP----VRD 285
L K G S N + ++ Y CG+L AR +F+ P +D
Sbjct: 164 L-----KLGFSS------------NRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKD 206
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
V WTAMI+G+V+ + A+ FR MQ ++P++F +V +L+ C+QLGALE G+W+H
Sbjct: 207 TVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHS 266
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
Y+ + I ++ V ALI MY++CG I++A +F E++++D ++ ++I GL+MNGK +
Sbjct: 267 YMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQ 326
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A+ELF M+ +P ++TF+GVL+ACSHGGLVD G F++M Y+++P++EHYGC++
Sbjct: 327 AIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMV 386
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DLLGR G L+EA +LIR + + I++ G LLSAC+++ N+++GE++A LE
Sbjct: 387 DLLGRVGRLEEAYDLIRTMKMTPDHIML---GTLLSACKMHKNLELGEQVAKELEDRGQA 443
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSE 585
DS + LL+++YAS+ +W++ VR KMKE G++K PGCSSIE+N IHEFL+GD H +
Sbjct: 444 DSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQ 503
Query: 586 MKEIY 590
+ IY
Sbjct: 504 KERIY 508
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 216/429 (50%), Gaps = 52/429 (12%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+ I AQ+ + G Q+P + +L+ C+ H + YA +IF +P + Y LI
Sbjct: 52 INQVLPIHAQLIRNGHSQDPFMVFELLRSCS-KCHA-IDYASRIFQYTHNPNVYLYTALI 109
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F G++ +++ L+S++ + PDN+ + KA G +++G +VH +K G
Sbjct: 110 DGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFS 169
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPD----KDVVSWNVSISGHVKCMRFEDAVDV 176
+ V IM++YG G++ + +++F+EMP+ KD V W I G V+ A++
Sbjct: 170 SNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEA 229
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYC 235
FR M QG N+ P+E T+V LSAC+ L LE+G+ +H Y+ + E+E +GNAL++MY
Sbjct: 230 FRGM-QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 288
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD---------------- 279
+CG + EA+ +FDEM +++VI + +M+SG G+ +A +LF
Sbjct: 289 RCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVG 348
Query: 280 ------------------RSPVRD------IVLWTAMINGYVQFNRFDEAVALFREMQII 315
S RD I + M++ + R +EA L R M
Sbjct: 349 VLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM--- 405
Query: 316 RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
++ PD +L LL+ C LE G+ + + E+R D+ L +YA G ++A
Sbjct: 406 KMTPDHIMLGTLLSACKMHKNLELGEQVAKEL-EDRGQADSGTYVLLSHVYASSGKWKEA 464
Query: 376 LEIFYELRE 384
++ +++E
Sbjct: 465 AQVRAKMKE 473
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
II L + IN+ L + +Q+I G D +L +CS +D R F Y
Sbjct: 42 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQ-----Y 96
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVP---LYGALLSACRIYGNV 509
P + Y LID +G EA +L ++ +E+ I+P L ++L AC +
Sbjct: 97 THNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHES---ILPDNYLMASILKACGSQLAL 153
Query: 510 DMGEKLAALLEKIE-SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
G ++ + K+ S + + +Y D V ++M E V K C +
Sbjct: 154 REGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 213
Query: 569 INGII 573
I+G +
Sbjct: 214 IDGFV 218
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 298/540 (55%), Gaps = 42/540 (7%)
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
F + +++ + GV D TY + K G V++G++VH ++ G E
Sbjct: 30 FCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
+V N++++MY + + LFDEMP+++VVSW IS + + + + R+
Sbjct: 90 MFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFRE 149
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLS 241
G + P+ T S L AC L NL +++H I LE + +AL+D+Y K
Sbjct: 150 G--VRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSK----- 199
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
W+ L+ A +FD P RD+V+W ++I G+ Q +
Sbjct: 200 ----------------WSD----------LDNALGVFDEMPTRDLVVWNSIIGGFAQNSD 233
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+EA+ LF+ M+ D+ L ++L C L LE G+ +H ++ + D ++ A
Sbjct: 234 GNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL--KFDQDLILNNA 291
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MY KCG +E A F + EKD SW++++ GLA NG +ALELF M G++P+
Sbjct: 292 LIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPN 351
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
IT +GVL ACSH GLV++G +F +M +++ + P EHYGCLIDLLGRAG LDEA +LI
Sbjct: 352 YITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLI 411
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
++ E + + + LL ACR++ NVD+ A + ++E +D+ + LL+NIYA+
Sbjct: 412 HEMECEPDSVT---WRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQ 468
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
RWEDV VR+ M G+RK PGCS IE++ IH F++GD SH +++EI L+ + + ++
Sbjct: 469 RWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVM 528
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 310/568 (54%), Gaps = 51/568 (8%)
Query: 9 AQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGS 68
A + + G ++ N ++ + +G + +A K+F + + +N++I + K G+
Sbjct: 123 AHVLKSGYDRDHYVRNGIL--GIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGN 180
Query: 69 FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNS 128
++ LF + ++ +S + T+ + G KKG +KT
Sbjct: 181 EEEASTLFHVMGDQEISRNVITWTTMIT-----GHAKKGN------LKTA---------- 219
Query: 129 IMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMP 188
+ FD+MP++ VVSWN +SG+ + E+ + +F M N+ P
Sbjct: 220 --------------RMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 265
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEAREL 246
DE T V+ +S+C++L + L + I R ++ + F P + ALLDM+ KCG L A ++
Sbjct: 266 DETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKI 325
Query: 247 FDEM---PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
F+++ ++ + W +M+S Y G L AR LFD+ P RD V W +MI GY Q
Sbjct: 326 FEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESV 385
Query: 304 EAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
+A+ LF EM KPD+ +V++ + C LG L G W + EN I + V +L
Sbjct: 386 KAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSL 445
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
I MY++CG ++ A+ IF E+ +D S+ ++I G A +G +++EL +M G +PD
Sbjct: 446 ISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDR 505
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
IT+I +L+ACSH GL+ EG+R F ++ P ++HY C+ID+LGRAG L+EA +LI+
Sbjct: 506 ITYIAILTACSHAGLLGEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQ 560
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P E + I YG+LL+A I+ V++GE AA L K+E +S + LL+NIYASA R
Sbjct: 561 SMPMEPHAGI---YGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGR 617
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEIN 570
W+D VR M++ GV+K G S +E N
Sbjct: 618 WKDGDKVRDTMRKQGVKKTTGLSWLEHN 645
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 157/596 (26%), Positives = 258/596 (43%), Gaps = 92/596 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTH---PSHGNLLYAEKIFGSIQSPCLLAYN 57
+ +L+Q+ AQ+ L + L+ CT PS Y IF + P + +
Sbjct: 16 LHRLRQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSS----YTCHIFHAATHPDVRVFT 71
Query: 58 LLIKAFAKKG-SFRKSLLLFSK-LRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
++K +++ G + + LF LR + P+ Y + K+ G + +V+
Sbjct: 72 FMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAG-----SESMLFLAHVL 126
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K+G + D YV N I+ +Y G I +KLFDEMPD+ V WNV ISG+ KC E+A
Sbjct: 127 KSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEAST 186
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+F M +QE+ I ++ +
Sbjct: 187 LFHVMG-----------------------------------DQEISRNVITWTTMITGHA 211
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR--SPVR---DIVLWT 290
K G L AR FD+MP ++V+ W +M+SGY G E+ LF+ SP D W
Sbjct: 212 KKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWV 271
Query: 291 AMINGYVQFNRFDEAVALFREM-QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE 349
+I+ + ++ R++ + +P+ F+ ALL A+ G LE I +
Sbjct: 272 TVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 331
Query: 350 NRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
+ +V A+I YA+ G + A +F ++ ++D SW S+I G NG+ KA++L
Sbjct: 332 YKYR-SSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKL 390
Query: 410 FSQMISG-GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
F +MIS +KPD++T + V SAC H G + G + + E + IQ + Y LI +
Sbjct: 391 FEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENH-IQISISVYNSLISMY 449
Query: 469 GRAGLLDEAE-------------------------------ELIRKIPNENNEIIVPLYG 497
R G + +A EL+ K+ + E Y
Sbjct: 450 SRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYI 509
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
A+L+AC G + G++ L E I+ D + + ++ A R E+ + Q M
Sbjct: 510 AILTACSHAGLLGEGQR---LFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM 562
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 290/528 (54%), Gaps = 64/528 (12%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV---- 159
+++G+KVH ++ +G ++ N +++MY + + +KLFDEMP++D+ SWN+
Sbjct: 86 LQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISG 145
Query: 160 ---------------------------SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
ISG+V+ R +A+++FR M++ N ++ T
Sbjct: 146 YAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFT 205
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
V S L+A A+ L +GKEIH YI M L +
Sbjct: 206 VSSALAAAAAVPCLRIGKEIHGYI---------MRTGL---------------------D 235
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
+ + W+++ Y CG +E+AR +FD+ RDIV WTAMI+ Y Q R E LF ++
Sbjct: 236 SDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADL 295
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
++P++F +L CA + E GK +HGY+ + A+AL+ MY+KCG +
Sbjct: 296 LRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNM 355
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
A +F E + D SWTS+I G A NG+ ++A+ F ++ G +PD ITF+GVLSAC
Sbjct: 356 VSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSAC 415
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
+H GLVD+G +F+++ E Y + +HY C+IDLL R+G DEAE +I K+ + ++
Sbjct: 416 AHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKF- 474
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
L+ +LL CRI+GN+ + ++ A L +IE ++ + + LANIYA+A W +V +R+
Sbjct: 475 --LWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKT 532
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
M + GV K PG S I I +H FLVGD SH + KEI L +++K +
Sbjct: 533 MDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRM 580
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 187/331 (56%), Gaps = 13/331 (3%)
Query: 169 RFEDAVDVF---RRMRQGCNLM-----PDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
RF++A+ + R+++ ++ P + + +C + L+ GK++H++I
Sbjct: 41 RFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLS- 99
Query: 221 EFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF 278
F P + N LL+MY KC L ++++LFDEMP +++ W ++SGY G L++A+ LF
Sbjct: 100 GFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLF 159
Query: 279 DRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILVALLTGCAQLGAL 337
D+ P RD WTAMI+GYV+ +R +EA+ LFR M+ K +KF + + L A + L
Sbjct: 160 DKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCL 219
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
GK IHGYI + D VV +AL +MY KCG IE+A IF ++ ++D +WT++I
Sbjct: 220 RIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRY 279
Query: 398 AMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+G+ + +LF+ ++ G +P++ TF GVL+AC++ + G++ MT V P
Sbjct: 280 FQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRV-GFDPF 338
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
L+ + + G + AE + ++ P +
Sbjct: 339 SFAASALVHMYSKCGNMVSAERVFKETPQPD 369
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 205/447 (45%), Gaps = 81/447 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q K++ I G LN+L+ + +L+ ++K+F + L ++N+LI
Sbjct: 86 LQQGKKVHQHIKLSGFVPGLFILNRLLEM--YAKCDSLMDSQKLFDEMPERDLCSWNILI 143
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF----------KAVGWLGEVKK---- 106
+AK G +++ LF K+ ER DNF++ + +A+ +K+
Sbjct: 144 SGYAKMGLLQEAKSLFDKMPER----DNFSWTAMISGYVRHDRPNEALELFRMMKRSDNS 199
Query: 107 ----------------------GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKK 144
G+++HGY+++TGL+ D V +++ DMYG G I +
Sbjct: 200 KSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARH 259
Query: 145 LFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR-MRQGCNLMPDEGTVVSTLSACTAL 203
+FD+M D+D+V+W I + + R ++ D+F +R G + P+E T L+AC
Sbjct: 260 IFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSG--IRPNEFTFSGVLNACANQ 317
Query: 204 KNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+ ELGK++H Y+ + + F P +AL+ MY KCG + A +F E P ++ WTS+
Sbjct: 318 TSEELGKKVHGYMTR-VGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSL 376
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
++GY GQ DEA+ F + +PD
Sbjct: 377 IAGYAQNGQP-------------------------------DEAIRYFELLVKSGTQPDH 405
Query: 322 FILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY 380
V +L+ CA G +++G + H + +T A +I++ A+ G ++A I
Sbjct: 406 ITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIIS 465
Query: 381 ELREK-DAASWTSIICGLAMNGKINKA 406
++ K D W S++ G ++G + A
Sbjct: 466 KMSMKPDKFLWASLLGGCRIHGNLKLA 492
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 141/318 (44%), Gaps = 17/318 (5%)
Query: 5 KQIQAQIFQIGLQQNP---ETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
K+I I + GL + L+ + C G++ A IF + ++ + +I
Sbjct: 223 KEIHGYIMRTGLDSDEVVWSALSDMYGKC-----GSIEEARHIFDKMVDRDIVTWTAMID 277
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + G ++ LF+ L G+ P+ FT+ V A + G+KVHGY+ + G +
Sbjct: 278 RYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDP 337
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
++ ++++ MY G + + +++F E P D+ SW I+G+ + + ++A+ F +
Sbjct: 338 FSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLV 397
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGC 239
+ PD T V LSAC ++ G + I ++ T + ++D+ + G
Sbjct: 398 KS-GTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQ 456
Query: 240 LSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE----KARDLFDRSPVRDIVLWTAMIN 294
EA + +M K + W S++ G G L+ A LF+ P + + + N
Sbjct: 457 FDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEP-ENPATYVTLAN 515
Query: 295 GYVQFNRFDEAVALFREM 312
Y + E + + M
Sbjct: 516 IYATAGMWSEVAKIRKTM 533
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 202/562 (35%), Positives = 307/562 (54%), Gaps = 36/562 (6%)
Query: 38 LLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKA 97
L +A +F + + ++N +I FA+ G + + LF ++ G+ D+ T + +
Sbjct: 105 LGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHS 164
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD--KDVV 155
L ++K E +H + +K G++ D V N+ + Y G+ + +FD + K V
Sbjct: 165 ALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGV 224
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I+G+ + AV F++M G D T++S LS+C + L GK IH +
Sbjct: 225 SWNSMIAGYAHFEQCSKAVGFFKKMLCG-GFRADLSTILSLLSSCVQPEVLFHGKLIHAH 283
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
Q GC S+ + + +++S Y CG + AR
Sbjct: 284 GIQ------------------VGCDSDIQVI------------NTLISMYSKCGDIGSAR 313
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
LFD + V WTAMI GY + DEA+ LF M+ + KPD +++L++GC Q G
Sbjct: 314 YLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTG 373
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
ALE GKWI Y N + + +V ALI++YAKCG ++ A E+FY + EK SWT++I
Sbjct: 374 ALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIA 433
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A+NG+ +AL LF QM+ G KP+ ITF+ VL AC+H G +++G FN MT+VY+I
Sbjct: 434 GCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKIN 493
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKL 515
P L+HY C+ DLLGR G L EA E I+ +P + + V ++ LLSAC+I+ NV +GE +
Sbjct: 494 PGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPD---VGIWSVLLSACKIHQNVVIGECV 550
Query: 516 AALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHE 575
A L ++E + + + +ANIYASA +W+ V +R MK K PG S +++NG HE
Sbjct: 551 AYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLVQVNGKTHE 610
Query: 576 FLVGDPSHSEMKEIYSMLDRMA 597
F V D H E IY L+ +A
Sbjct: 611 FTVEDRCHPEGLLIYETLENLA 632
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 223/472 (47%), Gaps = 44/472 (9%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N I +G K+LLLF ++++ G+ P+N T+P V KA L +K + VH +VV
Sbjct: 22 WNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVV 81
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
K+ + D +V S++DMY ++ LF MP +DV SWN I G + + V
Sbjct: 82 KSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVS 141
Query: 176 VFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDM 233
+F M +G + D TV+ + +LK+L++ + IH + I ++ + N +
Sbjct: 142 LFCEMGIEG--IRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAA 199
Query: 234 YCKCGCLSEARELFDEMPN--KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTA 291
Y KCG A +FD + K + W SM++GY +
Sbjct: 200 YAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAH------------------------ 235
Query: 292 MINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
F + +AV F++M + D +++LL+ C Q L GK IH + +
Sbjct: 236 -------FEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVG 288
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
D V LI MY+KCG I A +F + K SWT++I G A G +++A+ LFS
Sbjct: 289 CDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFS 348
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
M + G KPD +T I ++S C G ++ G ++ +T ++ L LID+ +
Sbjct: 349 AMEAVGEKPDLVTIISLMSGCGQTGALELG-KWIDTYATANGLKDNLMVCNALIDVYAKC 407
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
G +D A EL +P ++ + + L++ C + G + E L + +E
Sbjct: 408 GSMDNARELFYTMPEKS----LVSWTTLIAGCALNG--EFKEALGLFFQMVE 453
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 13/317 (4%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K I A Q+G + + +N L+ + G++ A +F ++ +++ +I +A
Sbjct: 278 KLIHAHGIQVGCDSDIQVINTLISM--YSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYA 335
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+KG +++ LFS + G PD T + G G ++ G+ + Y GL+ +
Sbjct: 336 EKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLM 395
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
VCN+++D+Y G + N ++LF MP+K +VSW I+G F++A+ +F +M +
Sbjct: 396 VCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVE-L 454
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
L P+ T ++ L AC LE G E + + + P + + + D+ + G L E
Sbjct: 455 GLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKE 514
Query: 243 ARELFDEMPNK-NVICWTSMVSG-----YVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
A E MP K +V W+ ++S V G+ A LF+ P + V + M N Y
Sbjct: 515 AFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGEC-VAYHLFELEP-QTAVPYVQMANIY 572
Query: 297 VQFNRFDEAVALFREMQ 313
++D A+ M+
Sbjct: 573 ASAGKWDRVAAIRTMMK 589
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 162/393 (41%), Gaps = 65/393 (16%)
Query: 154 VVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
V WN SI+ V A+ +FR+M+Q L P+ T S AC+ L NL+ + +H
Sbjct: 19 VAQWNSSITESVNQGYAHKALLLFRQMKQN-GLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 214 RY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+ + + + +++DMY KC L A LF MP ++V W SM
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSM----------- 126
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
I G+ Q D V+LF EM I ++ D ++ L
Sbjct: 127 --------------------ILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSAL 166
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE--KDAASW 390
L L+ + IH + + I D V+ I YAKCG A +F + + K SW
Sbjct: 167 SLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSW 226
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS------HGGLV------ 438
S+I G A + +KA+ F +M+ GG + D T + +LS+C HG L+
Sbjct: 227 NSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQ 286
Query: 439 ---DEGRRFFNTMTEVYQIQPKLEHYGCLID-LLGRA--------------GLLDEAEEL 480
D + NT+ +Y + L D +LG+ G LDEA L
Sbjct: 287 VGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTL 346
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGE 513
+ + + +L+S C G +++G+
Sbjct: 347 FSAMEAVGEKPDLVTIISLMSGCGQTGALELGK 379
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 274 ARDLFDR-SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
A F+R S + + W + I V +A+ LFR+M+ L+P+ ++ C+
Sbjct: 6 ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
+L L+ + +H ++ ++R D V T++++MY KC + A +F + ++D ASW S
Sbjct: 66 KLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNS 125
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
+I G A G +++ + LF +M G + D +T IG+
Sbjct: 126 MILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGL 161
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 308/566 (54%), Gaps = 38/566 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
GNL A K+F + ++Y +I F K + +++ ++ ++R GV P+ T V
Sbjct: 9 GNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPNEVTMASVI 68
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A +G + +HG V+K + V ++++MY + + LFDEM +K+VV
Sbjct: 69 SACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFDEMQEKNVV 128
Query: 156 SWNVS-------------------------------ISGHVKCMRFEDAVDVFRRMRQGC 184
SWNV I G+V+ R +A+ ++R M
Sbjct: 129 SWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMYRLM-VST 187
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEA 243
L P E T++ +SAC + G+++H + + + ++ Y CG ++EA
Sbjct: 188 GLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEA 247
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+ +V ++++G++ +++AR+LF+ P RD+ W+ MI+GY Q ++
Sbjct: 248 CFQLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPG 307
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
A+ LF M ++P++ +V++ + A LG L++G+W H Y++ N I ++ ++ ++I
Sbjct: 308 MALELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLSASII 367
Query: 364 EMYAKCGLIEKALEIFYELREKDA--ASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
+MYAKCG I ALE+FY++R+K + + W +IICGLA +G +LE++S + K
Sbjct: 368 DMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLEIYSDLQRRHIKLS 427
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
ITFIGVLSAC H GLV G+ +F +M Y I P + HYGC++DLLG+AG L+E EELI
Sbjct: 428 AITFIGVLSACCHAGLVGLGKSYFKSMKSKYNIDPDIRHYGCMVDLLGKAGRLEEVEELI 487
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
R +P + + +I +G LLSAC+ + N+ +GE+ A L K++ LL+N+YA
Sbjct: 488 RSMPMKADVVI---WGMLLSACKTHRNITIGERAAENLAKLDPSHGPSRILLSNLYADVG 544
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSI 567
RWED VR+ M+ + ++PG S +
Sbjct: 545 RWEDAFLVRRVMQSHRMHRLPGYSGV 570
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 199/430 (46%), Gaps = 65/430 (15%)
Query: 161 ISGHVKCMRFEDAVDVFRRMRQ-GC-----------------------------NLMPDE 190
ISG+VK +DA +F M Q GC ++P+E
Sbjct: 2 ISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPNE 61
Query: 191 GTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T+ S +SAC + + + +H I + ++ LL+MYC L EAR LFDE
Sbjct: 62 VTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFDE 121
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
M KNV+ W M++GY G A+++F+ P +DIV W +I+GYV+ R EA+ ++
Sbjct: 122 MQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMY 181
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
R M L P + ++ L++ C + A+ +G+ +H + + V +I Y+ C
Sbjct: 182 RLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSAC 241
Query: 370 G-------------------------------LIEKALEIFYELREKDAASWTSIICGLA 398
G +I++A E+F E+ E+D SW+++I G
Sbjct: 242 GRINEACFQLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYT 301
Query: 399 MNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL 458
+ + ALELF +M++ G +P+++T + V SA + G + EG R+ + I
Sbjct: 302 QSDQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEG-RWAHEYVHYNSIPLND 360
Query: 459 EHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
+ID+ + G ++ A E+ +I ++ + V + ++ +G+ + ++ +
Sbjct: 361 NLSASIIDMYAKCGSINTALEVFYQIRDKAST--VSPWNTIICGLATHGHAKLSLEIYSD 418
Query: 519 LEKIESKDSS 528
L++ K S+
Sbjct: 419 LQRRHIKLSA 428
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
M+SGYV G L+ AR LF+ P + V +T MI G+V+ + + EA+ +++EM+ + + P+
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 321 KFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEM--------------- 365
+ + ++++ C ++G + + +HG + + +V+T L+ M
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 366 ----------------YAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALEL 409
Y+K G A E+F + +KD SW +II G ++ +AL +
Sbjct: 121 EMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMM 180
Query: 410 FSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
+ M+S G P ++T I ++SAC + EG++
Sbjct: 181 YRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQL 215
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
+I Y K G ++ A ++F + +K S+T++I G N +A++++ +M S G P+
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEV-----YQIQPKLEHYGCLIDLLGRA-GLLD 475
++T V+SAC G + + R + ++ + L + C LG A L D
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 476 EAEE 479
E +E
Sbjct: 121 EMQE 124
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 252/383 (65%), Gaps = 3/383 (0%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N +L Y G ++EAR +FD M ++++ W +M+ GY G+++ AR++F+ RD
Sbjct: 110 NVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAF 169
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W++M++ Y + R +A+ L+REM+ + PD +V++L+ C+ +GAL G +H ++
Sbjct: 170 SWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFV 229
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
N + +D + TALI+MYAKCG IE ++ +F+ + KD +W+S+I GLA +G + AL
Sbjct: 230 ESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDAL 289
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
LFS+M+S G +P+++TFIGVL +C+H GLV +G+++F++M+ V+ + PK++HYGC++DL
Sbjct: 290 SLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDL 349
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGR+G ++EA++LIR +P E + +I + ALL ACRIY NV++ E+ A L ++
Sbjct: 350 LGRSGHIEEAKQLIRDMPFEPDAVI---WRALLGACRIYKNVEVAEEAMAKLRVLDPHAD 406
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ LL+NIYA AN WE V +R+ ++ ++++PG SSIE IHEF+ GD SH K
Sbjct: 407 GHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSK 466
Query: 588 EIYSMLDRMAKTLLDSKQNAMEG 610
EIY ML M L + M G
Sbjct: 467 EIYKMLGEMMDRLRQAGYKPMTG 489
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 176/384 (45%), Gaps = 55/384 (14%)
Query: 39 LYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV 98
L+A + + L L++A+AK G + F + R D F + A
Sbjct: 61 LHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRR----DVFLCNVMLAAY 116
Query: 99 GWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWN 158
GEV + +V + E D N+++ Y V G++ +++F+ M D+D SW+
Sbjct: 117 VTRGEVAEARRVFDGM----RERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWS 172
Query: 159 VSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ 218
+S + K R +DA++++R MR C + PD T+VS LSAC+ + L +G E+H+++
Sbjct: 173 SMMSAYTKGRRSKDALELWREMRAAC-VNPDCTTMVSVLSACSDMGALAVGAEVHQFVES 231
Query: 219 E-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDL 277
+E +G AL+DMY KCG + + +F MP K+V+ W+SM+ G N G
Sbjct: 232 NGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHG-------- 283
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
F +A++LF M L+P++ + +L C LG +
Sbjct: 284 ---------------------FGH--DALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLV 320
Query: 338 EQGK-------WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAAS 389
GK +HG +T ++++ + G IE+A ++ ++ E DA
Sbjct: 321 SDGKKYFSSMSVVHG------VTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVI 374
Query: 390 WTSIICGLAMNGKINKALELFSQM 413
W +++ + + A E +++
Sbjct: 375 WRALLGACRIYKNVEVAEEAMAKL 398
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 139/290 (47%), Gaps = 7/290 (2%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFV 94
+G + A ++F + +++ ++ A+ K + +L L+ ++R V+PD T V
Sbjct: 150 NGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSV 209
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A +G + G +VH +V G+E D + +++DMY G I N ++F MP KDV
Sbjct: 210 LSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDV 269
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
++W+ I G DA+ +F RM L P+E T + L +CT L + GK+
Sbjct: 270 LTWSSMIIGLANHGFGHDALSLFSRMLSE-GLQPNEVTFIGVLISCTHLGLVSDGKKYFS 328
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
++ TP + + ++D+ + G + EA++L +MP + + W +++ +
Sbjct: 329 SMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNV 388
Query: 272 EKARDLFDRSPVRDIVL---WTAMINGYVQFNRFDEAVALFREMQIIRLK 318
E A + + V D + + N Y Q N ++ + R ++ R++
Sbjct: 389 EVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQ 438
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 63/195 (32%)
Query: 353 TVDAVVATALIEMYAKCGL-------------------------------IEKALEIFYE 381
D V TAL+E YAK G + +A +F
Sbjct: 72 AADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDG 131
Query: 382 LREKDAASWTSIICGLAMNGKIN-------------------------------KALELF 410
+RE+D SW ++I G A+NG+++ ALEL+
Sbjct: 132 MRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELW 191
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
+M + PD T + VLSACS G + G + E ++ ++ LID+ +
Sbjct: 192 REMRAACVNPDCTTMVSVLSACSDMGALAVGAE-VHQFVESNGVELDVKLGTALIDMYAK 250
Query: 471 AGLLDEAEELIRKIP 485
G ++ + + +P
Sbjct: 251 CGDIENSVRVFHSMP 265
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 323/566 (57%), Gaps = 38/566 (6%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L+ A K+F + + + L+I + G +++ LF + G PD FT V
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVI 278
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG---VLGKICNVKKLFDEMPDK 152
A + + G+++H ++ GL D V +++MY V G +C +K+FD++ D
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338
Query: 153 DVVSWNVSISGHVKCMRF-EDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
+V SW I+G+V+ + E+A+D+FR M +++P+ T STL AC L L +G++
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMIL-THVIPNHFTFSSTLKACANLAALRIGEQ 397
Query: 212 IHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
+ + +L F+ + C++ S++S Y G++
Sbjct: 398 VFTHA-VKLGFSSV------------NCVA-----------------NSLISMYARSGRI 427
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+ AR FD ++++ + +I+ Y + +EA+ LF E++ + F +LL+G
Sbjct: 428 DDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGA 487
Query: 332 AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWT 391
A +G + +G+ IH + ++ + ++ V ALI MY++CG IE A ++F ++ +++ SWT
Sbjct: 488 ASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWT 547
Query: 392 SIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
SII G A +G +ALELF +M+ G +P+++T+I VLSACSH GLV+EG + F +M
Sbjct: 548 SIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTE 607
Query: 452 YQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
+ + P++EHY C++D+LGR+G L EA + I +P + + ++ + L ACR++GN+++
Sbjct: 608 HGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALV---WRTFLGACRVHGNLEL 664
Query: 512 GEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEING 571
G+ A ++ + E D + + LL+N+YAS ++W++V+N+R+ MKE + K GCS +E+
Sbjct: 665 GKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVEN 724
Query: 572 IIHEFLVGDPSHSEMKEIYSMLDRMA 597
+H+F VGD SH + EIY L ++
Sbjct: 725 KVHKFYVGDTSHPKAAEIYDELQNLS 750
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 235/491 (47%), Gaps = 45/491 (9%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI-QSPCLLAYNLLIKAFAK 65
+ ++ Q LQ + TLN L+ + G A IF + S L++++ ++ FA
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISL--YSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFAN 145
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDTY 124
++LL F + E G P+ + + +A V G+ + G+V+KTG L+ D
Sbjct: 146 NNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVC 205
Query: 125 VCNSIMDMY-GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V ++DM+ G + + K+F++MP+++ V+W + I+ ++ +A+D+F M
Sbjct: 206 VGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFS 265
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKC---GC 239
PD T+ +SAC ++ L LG+++H + I L +G L++MY KC G
Sbjct: 266 -GYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGS 324
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+ AR++FD++ + NV WT+M++GYV G GY +
Sbjct: 325 MCAARKIFDQILDHNVFSWTAMITGYVQKG-------------------------GYDE- 358
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVA 359
EA+ LFR M + + P+ F + L CA L AL G+ + + + + VA
Sbjct: 359 ----EALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVA 414
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+LI MYA+ G I+ A + F L EK+ S+ ++I A N +ALELF+++ G
Sbjct: 415 NSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMG 474
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC--LIDLLGRAGLLDEA 477
TF +LS + G + +G + V + KL C LI + R G ++ A
Sbjct: 475 ASAFTFASLLSGAASIGTIGKGEQIH---ARVIKSGLKLNQSVCNALISMYSRCGNIESA 531
Query: 478 EELIRKIPNEN 488
++ + + N
Sbjct: 532 FQVFEDMEDRN 542
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
R +A++ M PD L C + + + G +H + ++ + +D+V
Sbjct: 46 RLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLN 105
Query: 361 ALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
+LI +Y+KCG EKA IF + +D SW++++ A N +AL F MI G
Sbjct: 106 SLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYY 165
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC-LIDLL--GRAGLLDE 476
P++ F ACS V G F + + +Q + GC LID+ GR L+
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDV-CVGCGLIDMFVKGRGDLVS- 223
Query: 477 AEELIRKIPNEN 488
A ++ K+P N
Sbjct: 224 AFKVFEKMPERN 235
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/497 (36%), Positives = 278/497 (55%), Gaps = 32/497 (6%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
+++H V+K L +++V ++ + + ++ +F+++ D DV+ +N I HV+
Sbjct: 34 KQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRN 93
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE---LE-FT 223
A VF M Q + D T L AC+ + + + IH + + L+ F
Sbjct: 94 SEPLLAFSVFFEM-QDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFV 152
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
P N+L+D Y K G L EAR LFDEMP ++ + W +++ GYV G++ A +LF++ P
Sbjct: 153 P---NSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPA 209
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
R++V W+ M G LK D ++++L+ CA G L GK +
Sbjct: 210 RNVVSWSTMEAG---------------------LKFDDGTVISILSACAVSGLLGLGKRV 248
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKI 403
H I R V+ ALI+MYAKCG +E AL IF+ + KD SW +II GLAM+G
Sbjct: 249 HASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHG 308
Query: 404 NKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGC 463
KAL+LFS+M G PD +TF+GVL AC+H G VDEG +F+ M Y + P++EHYGC
Sbjct: 309 EKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGC 368
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIE 523
++DLLGR G L EA L+ +P E N II +G LL ACR++ + E++ L K E
Sbjct: 369 MVDLLGRGGRLKEAFRLVHSMPLEPNAII---WGTLLGACRMHSATGLAEEVFDRLVKSE 425
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
DS ++L+NIYA+A W++ N+R +MK ++K G SSIE++ +HEF V D SH
Sbjct: 426 LSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSH 485
Query: 584 SEMKEIYSMLDRMAKTL 600
+ IY +D + + +
Sbjct: 486 PKSDRIYKTIDGLGQHI 502
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 199/429 (46%), Gaps = 51/429 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMV---FCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ Q+KQI AQ+ + L + KL+ C + A +F IQ P +L YN
Sbjct: 30 LNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQ-----MTLAVNVFNQIQDPDVLLYN 84
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+A + + +F ++++ GV DNFTYPF+ KA V+ E +H V K
Sbjct: 85 TLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKM 144
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G D +V NS++D Y LG++ ++LFDEMP++D VSWN + G+VK A ++F
Sbjct: 145 GFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELF 204
Query: 178 RRM---------RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMG 227
+M L D+GTV+S LSAC L LGK +H I + + + +
Sbjct: 205 EKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVS 264
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NAL+DMY KCG L A +F M K+V+ W +++ G G EKA LF R V
Sbjct: 265 NALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFV 324
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGY 346
PDK V +L C G +++G + H
Sbjct: 325 -------------------------------PDKVTFVGVLCACTHAGFVDEGLHYFHAM 353
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINK 405
+ + + ++++ + G +++A + + + E +A W +++ M+
Sbjct: 354 ERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGL 413
Query: 406 ALELFSQMI 414
A E+F +++
Sbjct: 414 AEEVFDRLV 422
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/616 (32%), Positives = 315/616 (51%), Gaps = 105/616 (17%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L ++F +++ + +N ++ +AK G F++S+ LF + E+G+
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI----------- 196
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
E K+ E + +LFD++ D+DV+
Sbjct: 197 -------EGKRPE--------------------------------SASELFDKLCDRDVI 217
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN ISG+V E ++++++M + D T++S L C L LGK +H
Sbjct: 218 SWNSMISGYVSNGLTERGLEIYKQMMY-LGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 216 -INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN------- 267
I E N LLDMY KCG L A +F++M +NV+ WTSM++GY
Sbjct: 277 AIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336
Query: 268 ----------------------------CGQLEKARDLFDRSPVRD----IVLWTAMING 295
G L+ +D+ D + + + A+++
Sbjct: 337 IRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDM 396
Query: 296 YVQFNRFDEAVALFREM----------QIIRLKPDKFILVALLTGCAQLGALEQGKWIHG 345
Y + D A ++F M I LKPD + +L CA L ALE+GK IHG
Sbjct: 397 YTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHG 456
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
YI N + D VA AL+++Y KCG++ A +F + KD SWT +I G M+G N+
Sbjct: 457 YILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNE 516
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
A+ F++M G +PD+++FI +L ACSH GL+++G RFF M + I+PKLEHY C++
Sbjct: 517 AIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 576
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
DLL R G L +A E I +P + I +GALL CRIY ++++ EK+A + ++E +
Sbjct: 577 DLLSRTGNLSKAYEFIETLPIAPDATI---WGALLCGCRIYHDIELAEKVAERVFELEPE 633
Query: 526 DSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG-DPSHS 584
++ ++ LLANIYA A +WE+V +R+K+ + G+RK PGCS IEI G ++ F+ G + SH
Sbjct: 634 NTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHP 693
Query: 585 EMKEIYSMLDRMAKTL 600
K+I S+L +M + +
Sbjct: 694 HSKKIESLLKKMRRKM 709
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 169/352 (48%), Gaps = 25/352 (7%)
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
D+ V +N I + E+A+++ M Q L + T S L C K+L GK
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMELVC-MCQKSEL--ETKTYSSVLQLCAGSKSLTDGK 119
Query: 211 EIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
++H I + + ++G L+ +Y CG L E R +FD M KNV W MVS Y G
Sbjct: 120 KVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 270 QL--------------------EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALF 309
E A +LFD+ RD++ W +MI+GYV + + ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIY 239
Query: 310 REMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKC 369
++M + + D ++++L GCA G L GK +H ++ + L++MY+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC 299
Query: 370 GLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVL 429
G ++ AL +F ++ E++ SWTS+I G +G+ + A+ L QM G K D + +L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSIL 359
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
AC+ G +D G+ + + + ++ L L+D+ + G +D A +
Sbjct: 360 HACARSGSLDNGKDVHDYI-KANNMESNLFVCNALMDMYTKCGSMDGANSVF 410
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/601 (32%), Positives = 309/601 (51%), Gaps = 48/601 (7%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ G A+K+F + + L++YN ++ + + G +L F + ER V N
Sbjct: 152 YAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMV 211
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVV------KTGLEFDTYVCNSIMDMYGVLGKICNVKKL 145
G VK G+ + + + + T +C GK+ ++L
Sbjct: 212 A---------GYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCG-----LAKYGKMAEAREL 257
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM------------------------R 181
FD MP K+VVSWN I+ +V+ ++ ++AV +F++M R
Sbjct: 258 FDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEAR 317
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
Q N MP + T ++N + E + ++ + N+++ Y + G +
Sbjct: 318 QVYNQMPCKDITAQTALMSGLIQNGRI-DEADQMFSRIGAHDVVCWNSMIAGYSRSGRMD 376
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
EA LF +MP KN + W +M+SGY GQ+++A ++F ++IV W ++I G++Q N
Sbjct: 377 EALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNL 436
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+ +A+ M KPD+ L+ CA L AL+ G +H YI ++ D V A
Sbjct: 437 YLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNA 496
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI MYAKCG ++ A ++F ++ D SW S+I G A+NG NKA + F QM S PD
Sbjct: 497 LIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPD 556
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
++TFIG+LSACSH GL ++G F M E + I+P EHY CL+DLLGR G L+EA +
Sbjct: 557 EVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTV 616
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
R + + N L+G+LL ACR++ N+++G A L ++E ++S + L+N++A A
Sbjct: 617 RGMKVKAN---AGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAG 673
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL 601
RWE+V VR M+ K PGCS IE+ I FL DP+ K I +L+ +A +
Sbjct: 674 RWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMR 733
Query: 602 D 602
D
Sbjct: 734 D 734
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 223/477 (46%), Gaps = 59/477 (12%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + L+++N +I + ++ LF + ER DNF++ +
Sbjct: 67 ARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPER----DNFSWALMITCYTR 122
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
G+++K ++ V + DT N+++ Y G+ + KK+F++MP KD+VS+N
Sbjct: 123 KGKLEKARELLELVPD---KLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSM 179
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS-TLSACTALKNLELGKEIHRYINQE 219
++G+ + + A+ F M E VVS L +K+ +L Q
Sbjct: 180 LAGYTQNGKMHLALQFFESM--------TERNVVSWNLMVAGYVKSGDLSSAW-----QL 226
Query: 220 LEFTPIMGNAL--LDMYC---KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKA 274
E P NA+ + M C K G ++EARELFD MP+KNV+ W +M++ YV Q+++A
Sbjct: 227 FEKIP-NPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEA 285
Query: 275 RDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
LF + P +D V WT +INGY++ + DEA ++ +M D AL++G Q
Sbjct: 286 VKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPC----KDITAQTALMSGLIQN 341
Query: 335 GALEQGK-------------W---IHGYINENRI-----------TVDAVVATALIEMYA 367
G +++ W I GY R+ ++V +I YA
Sbjct: 342 GRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYA 401
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
+ G +++A EIF +REK+ SW S+I G N AL+ M G KPD TF
Sbjct: 402 QAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFAC 461
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
LSAC++ + G + + + + L LI + + G + AE++ R I
Sbjct: 462 TLSACANLAALQVGNQLHEYILKSGYMN-DLFVGNALIAMYAKCGRVQSAEQVFRDI 517
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 207/396 (52%), Gaps = 36/396 (9%)
Query: 98 VGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSW 157
+G LG+V+ E + + T TY NS++ + +I + ++LFD+M +++VSW
Sbjct: 27 LGKLGKVE--EAIRIFFNMTHKNLVTY--NSMISVLAKNARIRDARQLFDQMSLRNLVSW 82
Query: 158 NVSISGHVKCMRFEDAVDVFRRMRQGCNLMP--DEGTVVSTLSACTALKNLELGKEIHRY 215
N I+G++ E+A ++F ++MP D + ++ T LE +E+
Sbjct: 83 NTMIAGYLHNNMVEEASELF-------DVMPERDNFSWALMITCYTRKGKLEKARELLEL 135
Query: 216 INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ +L+ NA++ Y K G ++A+++F++MP K+++ + SM++GY G++ A
Sbjct: 136 VPDKLD--TACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLAL 193
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
F+ R++V W M+ GYV+ A LF ++ P+ V +L G A+ G
Sbjct: 194 QFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIP----NPNAVSWVTMLCGLAKYG 249
Query: 336 ALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSII 394
+ + + + + ++N ++ +A++AT Y + +++A+++F ++ KD+ SWT+II
Sbjct: 250 KMAEARELFDRMPSKNVVSWNAMIAT-----YVQDLQVDEAVKLFKKMPHKDSVSWTTII 304
Query: 395 CGLAMNGKINKALELFSQMISGGAKPDDITF-IGVLSACSHGGLVDEGRRFFNTMTEVYQ 453
G GK+++A ++++QM DIT ++S G +DE + F+ +
Sbjct: 305 NGYIRVGKLDEARQVYNQM-----PCKDITAQTALMSGLIQNGRIDEADQMFSRIGA--- 356
Query: 454 IQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
+ + +I R+G +DEA L R++P +N+
Sbjct: 357 --HDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNS 390
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 172/378 (45%), Gaps = 58/378 (15%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N+++ + K + +AR+LFD+M +N++ W +M++GY++ +E+A +LFD P RD
Sbjct: 52 NSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNF 111
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV---ALLTGCAQLGALEQGKWIH 344
W MI Y + + ++A +++ L PDK A++ G A+ G K
Sbjct: 112 SWALMITCYTRKGKLEKA------RELLELVPDKLDTACWNAMIAGYAKKGQFNDAK--- 162
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ E D V +++ Y + G + AL+ F + E++ SW ++ G +G ++
Sbjct: 163 -KVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLS 221
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT--------------- 449
A +LF ++ P+ ++++ +L + G + E R F+ M
Sbjct: 222 SAWQLFEKI----PNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYV 277
Query: 450 ------EVYQIQPKLEH-----YGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGA 498
E ++ K+ H + +I+ R G LDEA ++ ++P ++ + A
Sbjct: 278 QDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKD----ITAQTA 333
Query: 499 LLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
L+S G +D ++ + +I + D + Y+ + R ++ N+
Sbjct: 334 LMSGLIQNGRIDEADQ---MFSRIGAHDVVCWNSMIAGYSRSGRMDEALNL--------F 382
Query: 559 RKVPGCSSIEINGIIHEF 576
R++P +S+ N +I +
Sbjct: 383 RQMPIKNSVSWNTMISGY 400
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 146/318 (45%), Gaps = 23/318 (7%)
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMING 295
K G + EA +F M +KN++ + SM+S ++ AR LFD+ +R++V W MI G
Sbjct: 29 KLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAG 88
Query: 296 YVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
Y+ N +EA LF M + D F ++T + G LE+ + + + + +D
Sbjct: 89 YLHNNMVEEASELFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD---KLD 141
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
A+I YAK G A ++F ++ KD S+ S++ G NGK++ AL+ F M
Sbjct: 142 TACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTE 201
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
++ G + + G + + F + P + ++ L + G +
Sbjct: 202 RNVVSWNLMVAGYVKS----GDLSSAWQLFEKIP-----NPNAVSWVTMLCGLAKYGKMA 252
Query: 476 EAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLAN 535
EA EL ++P++N V + A+++ VD K L +K+ KDS T + N
Sbjct: 253 EARELFDRMPSKN----VVSWNAMIATYVQDLQVDEAVK---LFKKMPHKDSVSWTTIIN 305
Query: 536 IYASANRWEDVTNVRQKM 553
Y + ++ V +M
Sbjct: 306 GYIRVGKLDEARQVYNQM 323
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 307/557 (55%), Gaps = 35/557 (6%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A K+F + + +N +I + + G +SL F ++ GV PD T+ + +V
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
++ +++H Y+++ + D ++ ++++D Y + + +F + DVV +
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
ISG++ + D++++FR + + + P+E T+VS L L L+LG+E+H +I ++
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVK-VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
D C GC +++ Y CG++ A ++F+R
Sbjct: 472 ----------FDNRCNIGC--------------------AVIDMYAKCGRMNLAYEIFER 501
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
RDIV W +MI Q + A+ +FR+M + + D + A L+ CA L + G
Sbjct: 502 LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG 561
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K IHG++ ++ + D + LI+MYAKCG ++ A+ +F ++EK+ SW SII +
Sbjct: 562 KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Query: 401 GKINKALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
GK+ +L LF +M+ G +PD ITF+ ++S+C H G VDEG RFF +MTE Y IQP+ E
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE 681
Query: 460 HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALL 519
HY C++DL GRAG L EA E ++ +P + ++G LL ACR++ NV++ E ++ L
Sbjct: 682 HYACVVDLFGRAGRLTEAYETVKSMPFPPD---AGVWGTLLGACRLHKNVELAEVASSKL 738
Query: 520 EKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
++ +S ++ L++N +A+A WE VT VR MKE V+K+PG S IEIN H F+ G
Sbjct: 739 MDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSG 798
Query: 580 DPSHSEMKEIYSMLDRM 596
D +H E IYS+L+ +
Sbjct: 799 DVNHPESSHIYSLLNSL 815
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 235/525 (44%), Gaps = 77/525 (14%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N +I +F + G ++L + K+ GVSPD T+P + KA L K + + V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
G++ + +V +S++ Y GKI KLFD + KD V WNV ++G+ KC + +
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMY 234
F MR + P+ T LS C + ++LG ++H + ++F + N+LL MY
Sbjct: 226 GFSVMRMD-QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 235 CKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF---------------- 278
KCG +A +LF M + + W M+SGYV G +E++ F
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 344
Query: 279 -----------------------DRSPVRDIVLWTAMINGYV-------------QFNRF 302
S DI L +A+I+ Y Q N
Sbjct: 345 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 303 D------------------EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
D +++ +FR + +++ P++ LV++L L AL+ G+ +H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
G+I + + A+I+MYAKCG + A EIF L ++D SW S+I A + +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
A+++F QM G D ++ LSAC++ G+ M + + + + L
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTL 583
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
ID+ + G L A + + + +N + + ++++AC +G +
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKN----IVSWNSIIAACGNHGKL 624
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 178/408 (43%), Gaps = 52/408 (12%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFD--EMPDKDVVSWNVSI 161
+++G++VH +++ + D+Y I+ MY + G + K+F ++ + WN I
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSII 110
Query: 162 SGHVKCMRFEDAVDVFRRMRQGC-NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
S V+ A+ + +M C + PD T + AC ALKN + + ++
Sbjct: 111 SSFVRNGLLNQALAFYFKML--CFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
++ + ++L+ Y + G + +LFD + K+ + W M++GY CG L
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL-------- 220
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
D + F M++ ++ P+ +L+ CA ++
Sbjct: 221 -----------------------DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 340 GKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAM 399
G +HG + + + + + +L+ MY+KCG + A ++F + D +W +I G
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 400 NGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLE 459
+G + ++L F +MIS G PD ITF +L + S F + QI +
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK----------FENLEYCKQIHCYIM 367
Query: 460 HYGCLIDLLGRAGLLD-----EAEELIRKIPNENNEIIVPLYGALLSA 502
+ +D+ + L+D + + I ++ N + V ++ A++S
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 107/218 (49%), Gaps = 2/218 (0%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A +IF + ++++N +I A+ + ++ +F ++ G+ D +
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A L G+ +HG+++K L D Y ++++DMY G + +F M +K++V
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I+ + +D++ +F M + + PD+ T + +S+C + +++ G R
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP 251
+ ++ P + ++D++ + G L+EA E MP
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 301 RFDEAVALFREMQIIRLKPDKFI-------LVALLTGCAQLGALEQGKWIHGYINENRIT 353
RF A+A +++ +R +F+ L LL C+ L QGK +H ++ N I+
Sbjct: 9 RFAPAIAPYKKSLPLR-NSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSIS 67
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFY--ELREKDAASWTSIICGLAMNGKINKALELFS 411
D+ ++ MYA CG ++FY +LR W SII NG +N+AL +
Sbjct: 68 GDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYF 127
Query: 412 QMISGGAKPDDITFIGVLSAC 432
+M+ G PD TF ++ AC
Sbjct: 128 KMLCFGVSPDVSTFPCLVKAC 148
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 288/493 (58%), Gaps = 12/493 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVK---KLFDEMPDKDVVSWNVSISGH 164
+++H + G+ D + + ++ ++ L ++ KL +P+ +WN I
Sbjct: 30 KRIHALLFTLGISQDETIKSKLL-LFSALSPARDLDYSYKLILNVPNPTTFNWNTLIRAF 88
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFT 223
++ VF +M Q + PD T + A + L N ELG +H +I + E
Sbjct: 89 SNTKNPNPSITVFIKMLQN-GVSPDYLTYPFLVKATSKLLNQELGMAVHVHIVKSGHEID 147
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
+ N+L+ MY C ++ AR++FDEMP KN++ W +M+ GY CG L AR++F+ P
Sbjct: 148 KFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAKCGDLNMAREVFNLMPE 207
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
+D+V W+++I+GYV+ + EA+ALF M ++ LV+ L CA LGALE G+ +
Sbjct: 208 KDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSALCACAHLGALEHGRMM 267
Query: 344 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFY--ELREKDAASWTSIICGLAMNG 401
H YI EN + + V+ T+L++MYAKCG I +AL +F L+E D W +II GLA +G
Sbjct: 268 HRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLATHG 327
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
I +A+ LF +M G PD+IT++ +LS C+HGGLV+E FF+ + + + + PK+EHY
Sbjct: 328 LIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFDCLRK-HGMIPKVEHY 386
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C++D L RAG + EA + + ++P + + GALLS C +G +D+ + + L +
Sbjct: 387 ACMVDALSRAGQVSEAYQFLCQMPVQPTS---SMLGALLSGCMKHGKLDIAKVVGRRLVE 443
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
++ + L+NIYA+ RW+D N+R+ M+ GV+K PG S IE+ G++H F+ D
Sbjct: 444 LDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKKSPGFSFIEVYGVLHRFMAHDK 503
Query: 582 SHSEMKEIYSMLD 594
+H + ++I+ ML+
Sbjct: 504 THGDCEQIFMMLN 516
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 213/440 (48%), Gaps = 65/440 (14%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M +LK+I A +F +G+ Q+ +KL++F +L Y+ K+ ++ +P +N LI
Sbjct: 26 MFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILNVPNPTTFNWNTLI 85
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+AF+ + S+ +F K+ + GVSPD TYPF+ KA L + G VH ++VK+G E
Sbjct: 86 RAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQELGMAVHVHIVKSGHE 145
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D ++ NS++ MY I + +K+FDEMP K++V+WN + G+ KC A +VF M
Sbjct: 146 IDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAKCGDLNMAREVFNLM 205
Query: 181 RQGCNL------------------------------MPDEGTVVSTLSACTALKNLELGK 210
+ + M +E T+VS L AC L LE G+
Sbjct: 206 PEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSALCACAHLGALEHGR 265
Query: 211 EIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFD--EMPNKNVICWTSMVSGYVN 267
+HRYI EL T ++ +L+DMY KCG + EA +F + +V+ W +++ G
Sbjct: 266 MMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLAT 325
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
G ++ EA+ LF EM+++ + PD+ + L
Sbjct: 326 HGLIK-------------------------------EAMNLFCEMKMVGIVPDEITYLCL 354
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L+ CA G +E+ + + ++ + +++ ++ G + +A + ++ +
Sbjct: 355 LSCCAHGGLVEEAWYFFDCLRKHGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPT 414
Query: 388 ASWT-SIICGLAMNGKINKA 406
+S +++ G +GK++ A
Sbjct: 415 SSMLGALLSGCMKHGKLDIA 434
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 240/371 (64%), Gaps = 4/371 (1%)
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPN-KNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
P +L+ YC CG ++ AR +FDE +V+ W M+ GYV G L +AR+LFD P
Sbjct: 106 PHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKSGDLARARELFDVMP 165
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R++V WT +I Y Q + +EA+ +FR MQ+ ++PD L+++L+ C LG ++ G+W
Sbjct: 166 GRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEW 225
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H ++ + + + A+I+MY KCG ++KALE+F + +K +WT++I G A++G
Sbjct: 226 VHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGL 285
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
++A+ELF +M P+DITF+ VLS CSH GL D GR +F TM Y+I+P++EHYG
Sbjct: 286 GSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYG 345
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C+IDLLGRAG L EA LI+ +P + N I +GALL+A R +G+ ++GE+ L ++
Sbjct: 346 CMIDLLGRAGCLMEARGLIQDMPFKANAAI---WGALLAAARTHGDTELGEQALLHLIEL 402
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E +S + LL+NIYA RW+ V +R M++ G+R VPG SSI+++G++HEF D S
Sbjct: 403 EPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDGMVHEFTSRDGS 462
Query: 583 HSEMKEIYSML 593
H + +I +L
Sbjct: 463 HPSLHKIREVL 473
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 40/331 (12%)
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
L S L G + D + +A G V +V +T D N ++D Y
Sbjct: 93 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFD---ETAAYADVVSWNVMIDGYV 149
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
G + ++LFD MP ++VVSW + I + + + E+A++VFRRM Q + PD ++
Sbjct: 150 KSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRM-QVEGIEPDGVALL 208
Query: 195 STLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
S LSAC L ++LG+ +HR++ + + P+M NA++DMY KCG + +A E+F+ M
Sbjct: 209 SVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLM-NAIIDMYVKCGSVKKALEVFEGMEQ 267
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+++ WT+M++G+ G EAV LFR M
Sbjct: 268 KSIVTWTTMIAGFALHGL-------------------------------GSEAVELFRRM 296
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKW-IHGYINENRITVDAVVATALIEMYAKCGL 371
+ + P+ +A+L+ C+ +G + G+W +++ +I +I++ + G
Sbjct: 297 EKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGC 356
Query: 372 IEKALEIFYELREK-DAASWTSIICGLAMNG 401
+ +A + ++ K +AA W +++ +G
Sbjct: 357 LMEARGLIQDMPFKANAAIWGALLAAARTHG 387
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 129/240 (53%), Gaps = 4/240 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F + ++++ ++I A+A+ +++ +F +++ G+ PD V
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 211
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A G LG V GE VH +V++ GL + + N+I+DMY G + ++F+ M K +V
Sbjct: 212 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I+G +AV++FRRM + N+ P++ T ++ LS C+ + +LG+ +
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKE-NVSPNDITFLAVLSVCSHVGLTDLGRWYFKT 330
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ + + P + + ++D+ + GCL EAR L +MP K N W ++++ G E
Sbjct: 331 MVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTE 390
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 284/468 (60%), Gaps = 7/468 (1%)
Query: 136 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 195
+G + +++F+ + + WN I + E A +++M ++ + T
Sbjct: 35 VGDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSS-SVPHNSYTFPF 93
Query: 196 TLSACTALKNLELGKEIHRYINQELEFTPIMG-NALLDMYCKCGCLSEARELFDEMPNKN 254
L AC L + ++H + + + + NALL +Y CG + AR+LFD +P ++
Sbjct: 94 LLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERD 153
Query: 255 VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI 314
+ W M+ GY+ G ++ A +F P++++V WT++I+G V+ + EA++L EMQ
Sbjct: 154 AVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQN 213
Query: 315 IRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ D + +LLT CA LGAL+QG+W+H Y+ N + VD V+ AL+ MY KCG +E+
Sbjct: 214 AGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEE 273
Query: 375 ALEIFYELR--EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
AL +F +L+ +KD WT++I G A++G+ +ALE F++M G +P+ ITF VL AC
Sbjct: 274 ALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRAC 333
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
S+GGLV+EG+ F +M Y + P +EHYGC++DLLGR+G LDEA+ELI+K+P + + +I
Sbjct: 334 SYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVI 393
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+GALL AC I+ + +G ++ A L +++S S + LA I A+ +W++ VR K
Sbjct: 394 ---WGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLK 450
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
MK +GV PG SS+ +NGI+HEFL G H +M++I L ++A+ L
Sbjct: 451 MKSLGVPISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQLKLKQIAERL 498
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 211/465 (45%), Gaps = 97/465 (20%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M QLKQIQAQ+ + + P+ K + CT P G+LLYA+++F I SP +N +I
Sbjct: 1 MKQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAII 60
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
+A++ + L + ++ V +++T+PF+ +A L + + +VHG V+K G
Sbjct: 61 RAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFG 120
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
D + N+++ +Y + G+I ++LFD +P++D VSWN+ I G++K + A VF M
Sbjct: 121 SDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDM 180
Query: 181 ------------------------------RQGCNLMPDEGTVVSTLSACTALKNLELGK 210
Q D + S L+AC L L+ G+
Sbjct: 181 PLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGR 240
Query: 211 EIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVN 267
+H Y+ N ++ ++G AL++MY KCG + EA +F ++ K+V WT+M+ G+
Sbjct: 241 WLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFA- 299
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
I+G R EA+ F M+ ++P+ A+
Sbjct: 300 -------------------------IHG-----RGVEALEWFNRMRREGIRPNSITFTAV 329
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L C+ G +E+GK E++ K+++ FY +
Sbjct: 330 LRACSYGGLVEEGK----------------------ELF-------KSMKCFYNV-NPSI 359
Query: 388 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+ ++ L +G++++A EL +M KP + + +L AC
Sbjct: 360 EHYGCMVDLLGRSGRLDEAKELIKKM---PMKPSAVIWGALLKAC 401
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 290/475 (61%), Gaps = 19/475 (4%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
E+VH +++ GL D ++ + + + L +F+ + V WN I G+ +
Sbjct: 90 EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSEN 149
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIM 226
V +F RM++ + +PD+ T S + AC+ + ++ G H + + +
Sbjct: 150 YSVSLTVSLFIRMKRS-DAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFV 208
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
+L+D+Y KCG + AR++FDEM +NV+ WT+M++GY + L +AR LFD P ++
Sbjct: 209 MTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNA 268
Query: 287 VLWTAMINGYVQFNRFDEAVALFREM-----QII--------RLKPDKFILVALLTGCAQ 333
V W A+I+GYV+ A +F EM ++ +KPD+FI+V+L++ C+Q
Sbjct: 269 VSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSACSQ 328
Query: 334 LGALEQGKWIHGYINENRITVD-AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
+G+LE KW+ Y+ ++ I V A V ALI+M AKCG +++A ++F E+ ++D S+ S
Sbjct: 329 MGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCS 388
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
++ GL+++G +A+ LFS+M++ G PDD+ F +L+ACS GLVDEG +F +M Y
Sbjct: 389 MMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDY 448
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
I P +HY C++DLLGRAG L EA EL++ +P E + +GALL AC+++ ++++G
Sbjct: 449 SIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPH---AGAWGALLGACKLHCDIELG 505
Query: 513 EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
E +A L ++E +++ + LL+NIYA+A +W DV+ +R KM+E G+RK+PGCS I
Sbjct: 506 EVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 560
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 205/447 (45%), Gaps = 94/447 (21%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+ L+Q+ A+I + GL Q+ +++ + C S N Y +F + SP + +N IK
Sbjct: 87 STLEQVHARIIRKGLHQDHFIISQFLTLCN--SLSNFSYTTSVFNGVSSPSTVLWNTYIK 144
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ S ++ LF +++ PD FTYP + KA + VK+G HG V+ G+
Sbjct: 145 GYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGG 204
Query: 122 DTYVCNSIMDMYGVLGKI-------------------------------CNVKKLFDEMP 150
D +V S++D+YG G+I +KLFDEMP
Sbjct: 205 DVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMP 264
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ------------GCNLMPDEGTVVSTLS 198
+K+ VSWN ISG+VKC A +F M N+ PDE +VS +S
Sbjct: 265 EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMS 324
Query: 199 ACTALKNLELGKEIHRYINQ---ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
AC+ + +LEL K + Y+ + ++ ++ AL+DM KCG + A +LF+EMP +++
Sbjct: 325 ACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA-ALIDMNAKCGSMDRATKLFEEMPKRDL 383
Query: 256 ICWTSMVSGYV--NCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
I + SM+ G CG +AV+LF M
Sbjct: 384 ISYCSMMQGLSIHGCGP---------------------------------QAVSLFSRML 410
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT-----ALIEMYAK 368
L PD +LT C++ G +++G Y E+ T ++V + ++++ +
Sbjct: 411 NEGLTPDDVAFTVILTACSRAGLVDEG----CYYFESMKTDYSIVPSPDHYACMVDLLGR 466
Query: 369 CGLIEKALEIFYELR-EKDAASWTSII 394
G +++A E+ + E A +W +++
Sbjct: 467 AGRLKEAYELLKSMPVEPHAGAWGALL 493
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 304/523 (58%), Gaps = 12/523 (2%)
Query: 86 PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKL 145
P +Y +F+ + +K G++ H +V GL+ + ++ ++ MY G + + +
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 146 FDEMPDKDVVSWNVSISG---HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTA 202
FD + + + +N I H ++ + RM L+ D T+ L +C
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARM-HFLGLLGDNFTLPFVLKSCAD 193
Query: 203 LKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L + +G+ +H + + LE +G +L+DMY KCG + +AR+LFD+M +++ W ++
Sbjct: 194 LSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNAL 253
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM--QIIRLKP 319
++GY+ G++ A DLF+R R+IV WTAMI+GY Q ++A+ LF EM +KP
Sbjct: 254 IAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
+ +V++L CAQ ALE+G+ IH + N + +++ V TAL MYAKC + +A F
Sbjct: 314 NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCF 373
Query: 380 YELRE--KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+ + K+ +W ++I A +G +A+ +F M+ G +PD +TF+G+LS CSH GL
Sbjct: 374 DMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGL 433
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
+D G FN M ++ ++P++EHY C++DLLGRAG L EA+ELI ++P + + +G
Sbjct: 434 IDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSV---WG 490
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
ALL+ACR + N+++ E A L +E +S + LL+N+YA A WE+V +R +K G
Sbjct: 491 ALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQG 550
Query: 558 VRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
++K PGCS IEING H F+ D SH + KEIY L+ + + +
Sbjct: 551 MKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKI 593
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 167/376 (44%), Gaps = 75/376 (19%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q AQI GLQ N K++ + S G+L A +F I +P L YN +I+A+
Sbjct: 97 QQAHAQIVLHGLQPNAFLAAKMVAM--YASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154
Query: 65 KKGSFRKS---LLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ G L ++++ G+ DNFT PFV K+ L V G VHG ++ GLE
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG 214
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
D YV S++DMY G I + +KLFD+M +D+ SWN I+G++K A D+F RM
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME 274
Query: 181 -------------------------------RQGCNLMPDEGTVVSTLSACTALKNLELG 209
+ G + P+ T+VS L AC LE G
Sbjct: 275 HRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG 334
Query: 210 KEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN--KNVICWTSMVSGYV 266
+ IH + N L + AL MY KC L EAR FD + KN+I W +M++ Y
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394
Query: 267 N--CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
+ CG EAV++F M ++PD
Sbjct: 395 SHGCGV---------------------------------EAVSIFENMLRAGVQPDAVTF 421
Query: 325 VALLTGCAQLGALEQG 340
+ LL+GC+ G ++ G
Sbjct: 422 MGLLSGCSHSGLIDAG 437
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 115/258 (44%), Gaps = 12/258 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERG--VSPDNFTYPF 93
G + AE +F ++ ++++ +I + + G ++L LF ++ + G + P+ T
Sbjct: 261 GEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVS 320
Query: 94 VFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD-- 151
V A +++G ++H + GL ++ V ++ MY + + FD +
Sbjct: 321 VLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNG 380
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K++++WN I+ + +AV +F M + + PD T + LS C+ ++ G
Sbjct: 381 KNLIAWNTMITAYASHGCGVEAVSIFENMLRA-GVQPDAVTFMGLLSGCSHSGLIDAGLN 439
Query: 212 IHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNC 268
+ P + + ++D+ + G L EA+EL +MP W ++++ +
Sbjct: 440 HFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH 499
Query: 269 GQLE----KARDLFDRSP 282
LE AR LF P
Sbjct: 500 RNLEIAELAARRLFVLEP 517
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 281/473 (59%), Gaps = 19/473 (4%)
Query: 152 KDVVSWNVSISGHVKCMRFED----AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+DVVSW +I+ + R D A + + P++ T+++ LSAC +
Sbjct: 30 RDVVSWTSTIA---RAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSP 86
Query: 208 LGKEIHRYIN-QELEFTP---IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
L + + ++ + L+ P ++ L Y A +LFD MP ++V+ + +MVS
Sbjct: 87 LARPLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTYNTMVS 146
Query: 264 GYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFI 323
G + G ++ A ++FD P D V WTA+I+G+V+ R DEA+ FR M + ++PD
Sbjct: 147 GLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVT 206
Query: 324 LVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
L+A+++ CA++GAL G W+H + + + VA +LI+MYA+CG ++ A ++F+ +R
Sbjct: 207 LIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIR 266
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
++ SW S+I GLA NG +A+ELF +M G KPD +T GVL+ACSH GL + G R
Sbjct: 267 KRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLR 326
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSAC 503
+++ MT Y I ++EHYGC++DLLGRAG LDEA ++ +P NE+++ GALL+ C
Sbjct: 327 YYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVL---GALLAGC 383
Query: 504 RIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPG 563
R++G++DM E+L L +++ + + LL+NIYA+ +W+ VR MK GV+K PG
Sbjct: 384 RMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPG 443
Query: 564 CSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLL-----DSKQNAMEGD 611
S +EI+G +HEF+ D SH + +EI ML + + D ++++GD
Sbjct: 444 HSIVEIDGDVHEFVSSDRSHPQAEEIGQMLGLLRHEMAMYGCDDHGSSSLDGD 496
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + P +++ LI F K G +++ F + V PD T V A
Sbjct: 157 AFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLIAVVSACAE 216
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+G + G VH V++ GLE + V NS++DMY G++ ++F + + VVSWN
Sbjct: 217 VGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIRKRTVVSWNSM 276
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I G +A+++F MR+ PD T+ L+AC+ E G + + E
Sbjct: 277 IVGLAANGLCTEAIELFEEMRRQ-GFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEY 335
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKA--- 274
M + ++D+ + G L EA + + MP + N + ++++G G L+ A
Sbjct: 336 GIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHGDLDMAEQL 395
Query: 275 -RDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+ LF+ P D + + N Y ++D A
Sbjct: 396 MQHLFELDPGGD-ANYVLLSNIYAAVGKWDGA 426
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 325/629 (51%), Gaps = 70/629 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LK I A+ F+ L + L K+ F +G L YA+++F I P YN LI
Sbjct: 100 MQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLI 159
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW----LGEVKKGEKVHGYVVK 116
+ ++K S +S+ LF+++R V PD FT+ F+ K L + +++HG
Sbjct: 160 RGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHG---- 215
Query: 117 TGLEFD------TYVCNSIMDMYG-----------------------------------V 135
G+++D +Y+ N +M M V
Sbjct: 216 AGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALV 275
Query: 136 LGKICN------------VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
L KI +LF ++ + +N I G+ K +V +F +MR+
Sbjct: 276 LAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRN 335
Query: 184 CNLMPDEGTVVSTLSACTALK-NLEL---GKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
C + PD T L + ++ +L L EIH + F + NAL+ +Y G
Sbjct: 336 C-VDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARG 394
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A ++F+EM +V+ W+ +V +V G+LE AR +FD P RD+V WT M++GY Q
Sbjct: 395 VPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQ 454
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
R EA+ LFREM+ + ++PD+ +V +++ C LG LE G +H YI+EN +
Sbjct: 455 AKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSL 514
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI+MYAKCG ++ A ++F + K +W S+I A +G A +F+ M+ G
Sbjct: 515 CNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGI 574
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+PD +TF+ +L+A +H G VD+G F +M Y ++ +EHYGC++D+LGRAG L+EA
Sbjct: 575 RPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAY 634
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
+LI + N+++ +GALL+ACRIYG+V+MGE++ L +++ + ++ LL +IY
Sbjct: 635 KLITSMSMPCNDVV---WGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYV 691
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+A R + +R+ M G +K GCS +
Sbjct: 692 AAGRRAEAIELRRAMDVNGAKKTLGCSWV 720
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 33/321 (10%)
Query: 31 THPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
H G L A ++F + ++++ +++ +A+ R++L LF ++R+ GV PD
Sbjct: 420 AHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVA 479
Query: 91 YPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMP 150
V A LG+++ G +VH Y+ + G + +CN+++DMY G + ++F+ M
Sbjct: 480 MVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME 539
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
K +++WN IS EDA VF M + PD T ++ L+A T ++ G
Sbjct: 540 RKSLITWNSMISACANHGNAEDAFRVFTLMLXS-GIRPDGVTFLALLTAYTHKGWVDDGY 598
Query: 211 EIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVN 267
+ + ++ +E ++DM + G L EA +L M N + W ++++
Sbjct: 599 GLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRI 658
Query: 268 CGQLEKA----RDLFDRSP--------VRDIVLWTAMINGYVQFNRFDEAVALFREMQII 315
G +E + L + P +RDI YV R EA+ L R M +
Sbjct: 659 YGDVEMGERVLKKLIELKPDEGGYYILLRDI---------YVAAGRRAEAIELRRAMDVN 709
Query: 316 RLKPDKFILVALLTGCAQLGA 336
K GC+ +GA
Sbjct: 710 GAKKT--------LGCSWVGA 722
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 80/422 (18%), Positives = 170/422 (40%), Gaps = 76/422 (18%)
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI------NQELEFTPIMGNALLDMYCKCG 238
+++P ++ S AC A++ L+L IH N L I A + G
Sbjct: 82 HMLPTSQSLASMAEACLAMQALKL---IHARAFRANLHNHALVLAKIFRFAAVS---PNG 135
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD------------------- 279
CL A LF ++ N + +++ GY ++ LF+
Sbjct: 136 CLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLK 195
Query: 280 -RSPVR---DIVLWTAMINGY-VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQL 334
RS +R +++ + I+G V ++++ + + + +++ + P L ++ C +
Sbjct: 196 GRSRMRIDLPLIVASDEIHGAGVDYDKY-KTLKSYISNKVMHMLPTSQSLASMAEACLAM 254
Query: 335 GALEQGKWIHGYINENRITVDAVVATALIEMYAKC--GLIEKALEIFYELREKDAASWTS 392
AL K IH + A+V + A G + A +F ++ + + + +
Sbjct: 255 QAL---KLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNT 311
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS---------------HGGL 437
+I G + + +++++LF+QM PD TF +L S HG +
Sbjct: 312 LIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAV 371
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
+ G F L LI L G+ A ++ ++ + +V G
Sbjct: 372 LKLGFCF------------HLFVMNALIHLYAARGVPAAAHQVFNEMVGAD---VVSWSG 416
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
+++ R G +++ + + +++ +D T++ + YA A R + + ++M+++G
Sbjct: 417 LVVAHVRA-GELELARQ---VFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVG 472
Query: 558 VR 559
VR
Sbjct: 473 VR 474
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/605 (31%), Positives = 322/605 (53%), Gaps = 49/605 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A + G + N +N L+ + G L ++ + GS L+ +N ++ +
Sbjct: 135 KQVHAYGLRKG-ELNSFIINTLVAM--YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 191
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDT 123
+ ++L ++ GV PD FT V A L ++ G+++H Y +K G L+ ++
Sbjct: 192 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 251
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V ++++DMY ++ + +++FD M D+ + WN I+G+ + ++A+ +F M +
Sbjct: 252 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 311
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
L+ + T+ + AC + IH ++ + L+ + N L+DMY + G +
Sbjct: 312 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 371
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F +M + RD+V W MI GYV
Sbjct: 372 AMRIFGKMED-------------------------------RDLVTWNTMITGYVFSEHH 400
Query: 303 DEAVALFREMQ-----------IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
++A+ L +MQ + LKP+ L+ +L CA L AL +GK IH Y +N
Sbjct: 401 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 460
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ D V +AL++MYAKCG ++ + ++F ++ +K+ +W II M+G +A++L
Sbjct: 461 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 520
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
M+ G KP+++TFI V +ACSH G+VDEG R F M Y ++P +HY C++DLLGRA
Sbjct: 521 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 580
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G + EA +L+ +P + N+ + +LL A RI+ N+++GE A L ++E +S +
Sbjct: 581 GRIKEAYQLMNMMPRDFNK--AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 638
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LLANIY+SA W+ T VR+ MKE GVRK PGCS IE +H+F+ GD SH + +++
Sbjct: 639 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 698
Query: 592 MLDRM 596
L+ +
Sbjct: 699 YLETL 703
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 244/526 (46%), Gaps = 66/526 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI A +++ G + T+ +V + G+ K+F I +++N LI +
Sbjct: 30 KQIHAHVYKFGYGVDSVTVANTLV-NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 88
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG---EVKKGEKVHGYVVKTGLEF 121
+ +L F + + V P +FT V A L + G++VH Y ++ G E
Sbjct: 89 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 147
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
++++ N+++ MYG LGK+ + K L +D+V+WN +S + + +A++ R M
Sbjct: 148 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 207
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCG 238
+G PDE T+ S L AC+ L+ L GKE+H Y N L+ +G+AL+DMYC
Sbjct: 208 LEGVE--PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC--- 262
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
NC Q+ R +FD R I LW AMI GY Q
Sbjct: 263 ----------------------------NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 294
Query: 299 FNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
EA+ LF M+ L + + ++ C + GA + + IHG++ + + D
Sbjct: 295 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 354
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM---- 413
V L++MY++ G I+ A+ IF ++ ++D +W ++I G + AL L +M
Sbjct: 355 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 414
Query: 414 --ISGGA-----KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----YG 462
+S GA KP+ IT + +L +C+ + +G+ Y I+ L
Sbjct: 415 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-----HAYAIKNNLATDVAVGS 469
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
L+D+ + G L + ++ +IP +N V + ++ A ++GN
Sbjct: 470 ALVDMYAKCGCLQMSRKVFDQIPQKN----VITWNVIIMAYGMHGN 511
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 196/412 (47%), Gaps = 39/412 (9%)
Query: 83 GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY-VCNSIMDMYGVLGKICN 141
G+ PDN+ +P + KAV L +++ G+++H +V K G D+ V N+++++Y G
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACT 201
V K+FD + +++ VSWN IS ++E A++ FR M N+ P T+VS ++AC+
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE-NVEPSSFTLVSVVTACS 123
Query: 202 AL---KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
L + L +GK++H Y ++ E + N L+ MY K G L+ ++ L ++++ W
Sbjct: 124 NLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
+++S QL EA+ REM + ++
Sbjct: 184 NTVLSSLCQNEQLL-------------------------------EALEYLREMVLEGVE 212
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALE 377
PD+F + ++L C+ L L GK +H Y +N + ++ V +AL++MY C +
Sbjct: 213 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 272
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFIGVLSACSHGG 436
+F + ++ W ++I G + N +AL LF M S G + T GV+ AC G
Sbjct: 273 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 332
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ + + + L+D+ R G +D A + K+ + +
Sbjct: 333 AFSRKEAIHGFVVKRGLDRDRFVQ-NTLMDMYSRLGKIDIAMRIFGKMEDRD 383
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV-VATALIEMYAKCG 370
M ++ +KPD + ALL A L +E GK IH ++ + VD+V VA L+ +Y KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
++F + E++ SW S+I L K ALE F M+ +P T + V++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 431 ACSH 434
ACS+
Sbjct: 121 ACSN 124
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 195/550 (35%), Positives = 306/550 (55%), Gaps = 48/550 (8%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ AYN +I F G + ++R GV PD FT+P V +A EV+K +HG
Sbjct: 42 VFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEVRK---IHG 98
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
+ K GLE + +V +++++ Y + + +K+F+E+P++DVV WN I+G+ K
Sbjct: 99 CLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNK 158
Query: 173 AVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNAL 230
AV VF+RM +G +L T S LS T++ ++ G+ IH + + + + + NAL
Sbjct: 159 AVVVFKRMGEEGISL--SRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNAL 216
Query: 231 LDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWT 290
+DMY KC +A +F EM N+ +DLF W
Sbjct: 217 IDMYGKCKHTEDALMIF-EMINE---------------------KDLFS---------WN 245
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY---- 346
++I+ + Q + D + LF +M R+ PD + A+L C+ L AL G+ IHGY
Sbjct: 246 SIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVN 305
Query: 347 -INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+ +N D ++ A+++MYAKCG ++ A IF +R KD ASW +I G AM+G +
Sbjct: 306 GLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTE 365
Query: 406 ALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLI 465
AL++F +M KPD +TF+GVLSACSH G V +GR F M + + P +EHY C+I
Sbjct: 366 ALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCII 425
Query: 466 DLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESK 525
D+LGRAG L EA +L ++IP E+N I L+ ALL ACR++GN ++G + + ++E K
Sbjct: 426 DMLGRAGHLGEAYDLAQRIPLEDNLI---LWMALLGACRLHGNAELGNVVGEKITQLEPK 482
Query: 526 D--SSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
S + L++++Y R+E+ VR+ MKE V+K PGCS IE+ ++ F +GD +H
Sbjct: 483 HCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFSMGDRTH 542
Query: 584 SEMKEIYSML 593
E+ + + L
Sbjct: 543 HELNALINCL 552
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 222/496 (44%), Gaps = 81/496 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
++++I +F++GL+ N + L+ T+ AEK+F + ++ +N +I
Sbjct: 92 EVRKIHGCLFKMGLELNVFVGSALVN--TYLKVDGTEDAEKVFEELPERDVVLWNAMING 149
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+ K G K++++F ++ E G+S FT + + +G++ G +HG V K G
Sbjct: 150 YTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSC 209
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
V N+++DMYG + +F+ + +KD+ SWN IS H +C + + +F +M
Sbjct: 210 VAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKM-L 268
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI------NQELEFTPIMGNALLDMYCK 236
G ++PD T+ + L AC+ L L G+EIH Y+ E ++ NA++DMY K
Sbjct: 269 GSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAK 328
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CGC+ A +FD M NK+V W M+ GY G +A D+F R
Sbjct: 329 CGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHR---------------- 372
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
M ++KPD V +L+ C+ G + QG+
Sbjct: 373 ---------------MCEAQIKPDVVTFVGVLSACSHAGFVHQGR--------------- 402
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ L M + G+I +T II L G + +A +L +Q I
Sbjct: 403 ---SFLTRMELEFGVIPT------------IEHYTCIIDMLGRAGHLGEAYDL-AQRIP- 445
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE-VYQIQPKLEHYGCLI---DLLGRAG 472
+ + I ++ +L AC G + G N + E + Q++PK G I L G G
Sbjct: 446 -LEDNLILWMALLGACRLHGNAELG----NVVGEKITQLEPKHCGSGSYILMSSLYGVVG 500
Query: 473 LLDEAEELIRKIPNEN 488
+EA E+ R + +N
Sbjct: 501 RYEEALEVRRTMKEQN 516
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 148/324 (45%), Gaps = 37/324 (11%)
Query: 127 NSIMDMYGVLGKICNVKKLF-DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
S+++MY ++ +F D +++V ++N I+G V D ++RMR
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRS-VG 72
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEAR 244
+MPD+ T + AC + ++IH + LE +G+AL++ Y K +A
Sbjct: 73 VMPDKFTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAE 129
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
++F+E+P ++V+ W +M++GY G L KA +F R +E
Sbjct: 130 KVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMG--------------------EE 169
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
++L R F ++L+ +G + G+ IHG + + + V+ ALI+
Sbjct: 170 GISLSR-----------FTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALID 218
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MY KC E AL IF + EKD SW SII + L LF +M+ PD IT
Sbjct: 219 MYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVIT 278
Query: 425 FIGVLSACSHGGLVDEGRRFFNTM 448
VL ACSH + GR M
Sbjct: 279 ITAVLPACSHLAALMHGREIHGYM 302
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 19/227 (8%)
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPV--RDIVLWTAMINGYVQFNRFDEAVALFREMQIIR 316
TS+++ Y C Q+E+A +F R P R++ + A+I G+V + ++ M+ +
Sbjct: 14 TSLINMYSRCNQMEEAVLVF-RDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVG 72
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
+ PDKF ++ C + + + IHG + + + ++ V +AL+ Y K E A
Sbjct: 73 VMPDKFTFPCVVRACCEFMEVRK---IHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAE 129
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
++F EL E+D W ++I G G +NKA+ +F +M G T +LS + G
Sbjct: 130 KVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMG 189
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGC------LIDLLGRAGLLDEA 477
++ GR ++ I K+ + C LID+ G+ ++A
Sbjct: 190 DINNGR-------AIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDA 229
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 360 TALIEMYAKCGLIEKALEIFYE-LREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
T+LI MY++C +E+A+ +F + E++ ++ +II G NG + + +M S G
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGV 73
Query: 419 KPDDITFIGVLSACS--------HGGL--------VDEGRRFFNTM---------TEVYQ 453
PD TF V+ AC HG L V G NT +V++
Sbjct: 74 MPDKFTFPCVVRACCEFMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFE 133
Query: 454 IQPKLE--HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDM 511
P+ + + +I+ + G L++A + +++ E + ++LS G+++
Sbjct: 134 ELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINN 193
Query: 512 GEKLAALLEKI-ESKDSSFHTLLANIYASANRWEDVTNVRQKMKE 555
G + ++ K+ S + L ++Y ED + + + E
Sbjct: 194 GRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINE 238
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 303/512 (59%), Gaps = 28/512 (5%)
Query: 109 KVHGYVVKTGL---EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
++H ++KT L +F + + GV G + +F + + + I G
Sbjct: 24 QIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFS 83
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPD-EGTVVSTLSACTALKNLELGKEIH-RYINQELEFT 223
+++ ++ RM N E ++ S L AC L + G+++H + + L F
Sbjct: 84 DTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFD 143
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV 283
P +GN+++ MY G + AR +FD MPN++V+ W SM++GY+ G++E A +LFD P
Sbjct: 144 PFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPE 203
Query: 284 RDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWI 343
RD+V AMI+GY +EM + L+PD +V++L+ A LG +E+GKW+
Sbjct: 204 RDLVSCNAMIDGYG------------KEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWL 251
Query: 344 HGYINENRITVDA-VVATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNG 401
H Y++ N+I + + + +ALI+MY+KCG IE A +F + ++ W S+I GLA++G
Sbjct: 252 HAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG 311
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+AL++F +M +P++ITF+G+LS CSHGGLV+EG+ +F +M E Y+I P+++HY
Sbjct: 312 LAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHY 371
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC+IDL GRAG L++A +I+ +P E + + + A+LSA +G++++G+ A +
Sbjct: 372 GCMIDLFGRAGRLEDALGVIQNMPFEADLLA---WKAILSASMKHGHIEIGKSAALRAIE 428
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
+ DSS + LL+NIYA A RW+DV +R M++ GV+K+ GCSS+ +NG +HEFL+G
Sbjct: 429 LAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLG-- 486
Query: 582 SHSEMKEIYS--MLDRMAKTLLDSKQNAMEGD 611
E+ YS +L ++A+ + K E D
Sbjct: 487 --KELDSSYSGQVLAKIAEVVSRLKLQGYEPD 516
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 230/463 (49%), Gaps = 73/463 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPS-HGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L+QI AQ+ + L + T+++L+ FC+ G L YA +F IQ P + L
Sbjct: 19 LCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFAL 78
Query: 60 IKAFAKKGSFRKSLLLFSKLRE--RGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
IK F+ + +SL+L++++ S F+ P V KA G L +G +VHG V+KT
Sbjct: 79 IKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKT 138
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
L FD +V NS++ MY G+I +++FD MP++DVVSWN I+G++K E A ++F
Sbjct: 139 HLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELF 198
Query: 178 RRMRQ----GCNLM--------------PDEGTVVSTLSACTALKNLELGKEIHRYIN-Q 218
M + CN M PD +VS LSA L +E GK +H Y++
Sbjct: 199 DEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMN 258
Query: 219 ELEFTP-IMGNALLDMYCKCGCLSEARELFDEMPN-KNVICWTSMVSGYVNCGQLEKARD 276
++E + +G+AL+DMY KCG + A +F + + +N+ W SM+SG
Sbjct: 259 KIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLA---------- 308
Query: 277 LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGA 336
I+G + EA+ +F EM+ + ++P++ + LL+ C+ G
Sbjct: 309 ----------------IHGLAR-----EALDIFVEMERMDIEPNEITFLGLLSTCSHGGL 347
Query: 337 LEQGKWIHGYINENRITVDAVVATA-LIEMYAKCGLIEKALEIFYELR-EKDAASWTSII 394
+E+G++ ++E V + +I+++ + G +E AL + + E D +W +I+
Sbjct: 348 VEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAIL 407
Query: 395 CGLAMNGKIN-------KALELFSQMISGGAKPDDITFIGVLS 430
+G I +A+EL PDD + +LS
Sbjct: 408 SASMKHGHIEIGKSAALRAIEL---------APDDSSSYVLLS 441
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 199/587 (33%), Positives = 308/587 (52%), Gaps = 70/587 (11%)
Query: 42 EKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGW 100
E++F S+ ++YN LI F+ GS +S+ L+ L RE V P T +
Sbjct: 99 ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L + G VH V++ G +V + ++DMY +G I + +++F EM K VV +N
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218
Query: 161 ISGHVKCMRFEDA-------------------------------VDVFRRMR-QGCNLMP 188
I+G ++C EDA +DVFRRMR +G +
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGI-- 276
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELF 247
D+ T S L+AC AL LE GK+IH YI + E +G+AL+DMY K
Sbjct: 277 DQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSK----------- 325
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
C + A +F R R+I+ WTAMI GY Q +EAV
Sbjct: 326 --------------------CRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
F EMQ+ +KPD F L ++++ CA L +LE+G H + + V+ AL+ +Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG IE A +F E+ D SWT+++ G A GK + ++LF +M++ G KPD +TFIG
Sbjct: 426 KCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIG 485
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
VLSACS GLV++G +F++M + + I P +HY C+IDL R+G EAEE I+++P+
Sbjct: 486 VLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS 545
Query: 488 NNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVT 547
+ + LLS+CR+ GN+++G+ A L + + ++ + + LL +++A+ +W +V
Sbjct: 546 PDAFG---WATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVA 602
Query: 548 NVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
++R+ M++ V+K PGCS I+ +H F D SH IY L+
Sbjct: 603 HLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLE 649
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 215/447 (48%), Gaps = 34/447 (7%)
Query: 104 VKKGEKVHGYVVKTGLEFD-TYVCNSIMDMYGVLGKICNVKKLFDEMPD----------- 151
V+ VH ++KT L+ T++ N ++ Y G++ +++FDEMPD
Sbjct: 28 VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87
Query: 152 --------------------KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
+D VS+N I+G +V ++R + + ++ P
Sbjct: 88 ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147
Query: 192 TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T+ + + +AL + LG +H + + +G+ L+DMY K G + +AR +F EM
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
K V+ + ++++G + C +E A+ LF RD + WT M+ G Q EA+ +FR
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
M+ + D++ ++LT C L ALE+GK IH YI + V +AL++MY+KC
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCR 327
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
I A +F + ++ SWT++I G N +A+ FS+M G KPDD T V+S
Sbjct: 328 SIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVIS 387
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
+C++ ++EG + F+ + V + + L+ L G+ G +++A L ++ +
Sbjct: 388 SCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 446
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAA 517
L + +D+ EK+ A
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLA 473
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 124/249 (49%), Gaps = 8/249 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
AE +F + ++++ +I + + +++ FS+++ G+ PD+FT V +
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L +++G + H + +GL V N+++ +YG G I + +LFDEM D VSW
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
++G+ + + ++ +D+F +M L PD T + LSAC+ +E G + + ++
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLAN-GLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE----K 273
PI + ++D+Y + G EA E +MP+ + W +++S G +E
Sbjct: 511 GIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWA 570
Query: 274 ARDLFDRSP 282
A +L + P
Sbjct: 571 AENLLETDP 579
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A ++F + +++ L+ +A+ G ++++ LF K+ G+ PD T+ V
Sbjct: 428 GSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVL 487
Query: 96 KAVGWLGEVKKG-------EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
A G V+KG +K HG V D Y C ++D+Y G+ ++ +
Sbjct: 488 SACSRAGLVEKGCDYFDSMQKDHGIVPID----DHYTC--MIDLYSRSGRFKEAEEFIKQ 541
Query: 149 MP-DKDVVSWNVSIS 162
MP D W +S
Sbjct: 542 MPHSPDAFGWATLLS 556
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 301/504 (59%), Gaps = 19/504 (3%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNV--KKLFDEMPDKDVVSWNVSISGHV 165
+++HG+V++ GL+ Y+ ++ LG + +++ + + ++ W I G+
Sbjct: 67 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVIRGYT 126
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI 225
+F++A+ ++ MR+ + P T + L AC ++ +L LG++ H + F +
Sbjct: 127 IEGKFDEAIAMYGCMRKE-EITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFV 185
Query: 226 -MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
+GN ++DMY KCG + AR++FDEMP ++VI WT +++ Y G +E A DLF+ P +
Sbjct: 186 YVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTK 245
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALE------ 338
D+V WTAM+ G+ Q + EA+ F M+ ++ D+ + ++ CAQLGA +
Sbjct: 246 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 305
Query: 339 QGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLA 398
Q GY + + V+ +ALI+MY+KCG +E+A+ +F + K+ S++S+I GLA
Sbjct: 306 QIAQKSGYSPSDHV----VIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLA 361
Query: 399 MNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPK 457
+G+ +AL+LF M++ A KP+ +TF+G L+ACSH GLVD+GR+ F +M + + ++P
Sbjct: 362 THGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPT 421
Query: 458 LEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAA 517
+HY C++DLLGRAG L EA ELI+ + E + + +GALL ACRI+ N D+ E A
Sbjct: 422 RDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGV---WGALLGACRIHNNPDIAEIAAE 478
Query: 518 LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS-SIEINGIIHEF 576
L ++E + LL+N+Y+SA W V +VR+ +KE G++K P S ++ NG +H+F
Sbjct: 479 HLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKF 538
Query: 577 LVGDPSHSEMKEIYSMLDRMAKTL 600
G+ +H K+I L+ + + L
Sbjct: 539 FPGNLNHPMSKKIQDKLEELVERL 562
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 196/434 (45%), Gaps = 75/434 (17%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+KQI + + GL Q+ L KL+ T Y ++ +Q + +I
Sbjct: 63 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVI 122
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK-TGL 119
+ + +G F +++ ++ +R+ ++P +FT+ + KA G +G++ G + H + G
Sbjct: 123 RGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGF 182
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR- 178
F YV N+++DMY G I +K+FDEMP++DV+SW I+ + + E A D+F
Sbjct: 183 CF-VYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFES 241
Query: 179 ------------------------------RMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
RM + + DE TV +SAC L +
Sbjct: 242 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS-GIRADEVTVAGYISACAQLGASKY 300
Query: 209 GKEIHRYINQELEFTP----IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+ I Q+ ++P ++G+AL+DMY KCG + EA +F M NKNV ++SM+ G
Sbjct: 301 ADRAVQ-IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILG 359
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
G+ ++A DLF +V TA +KP+
Sbjct: 360 LATHGRAQEALDLFHY-----MVTQTA-------------------------IKPNTVTF 389
Query: 325 VALLTGCAQLGALEQGKWIHGYINEN---RITVDAVVATALIEMYAKCGLIEKALEIFYE 381
V LT C+ G ++QG+ + + + T D T ++++ + G +++ALE+
Sbjct: 390 VGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHY--TCMVDLLGRAGRLQEALELIKT 447
Query: 382 LR-EKDAASWTSII 394
+ E W +++
Sbjct: 448 MSVEPHGGVWGALL 461
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 302/547 (55%), Gaps = 46/547 (8%)
Query: 88 NFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDTYVCNSIMDMYGVLGKICNVKKLF 146
+FT + + ++ +K+HG V+ L ++ V +M +Y G+ + +F
Sbjct: 18 SFTEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIF 77
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKN 205
DE+ DK+VV +NV I +V ++DA+ V++ M QG +PD T L A + +
Sbjct: 78 DEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQG--FVPDMYTYPCVLKASSRSDS 135
Query: 206 LELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
L +G +IH + + L+ +GN L+ MY KC L EA+++ DE+P ++V+ W SMVS
Sbjct: 136 LWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSV 195
Query: 265 YVNCGQLEKA-------------------------------------RDLFDRSPVRDIV 287
Y G+ A +++F + + ++
Sbjct: 196 YAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVI 255
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W MI YV + EAV L+ +M+ ++PD +V++L L AL G+ +H +
Sbjct: 256 SWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFA 315
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
++ + ++ ALI+MYAKCG + A +F +++ +D SWTSII G+ A+
Sbjct: 316 ERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAV 375
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+F++M + G PD I F+ VL+ACSH GL+D+GR +FN M E I PKLEH+ C++DL
Sbjct: 376 AVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC-GITPKLEHFACVVDL 434
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGRAG +DEA IR++P E +E + +G LLSACR+Y N+++G A L + + S
Sbjct: 435 LGRAGKIDEAYGFIRQMPLEPDERV---WGPLLSACRVYSNMNIGILAADKLLMLNPEHS 491
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
++ LL+NIYA A RW DV +R M+ G++K+PG S++E+N +H FL GD SH + K
Sbjct: 492 GYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSK 551
Query: 588 EIYSMLD 594
+IY LD
Sbjct: 552 KIYEELD 558
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 240/532 (45%), Gaps = 78/532 (14%)
Query: 1 MTQLKQIQAQIFQIG-LQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAY 56
+ LK++ ++ L+ NP KLM C P A IF I ++ +
Sbjct: 34 INTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPG-----LARHIFDEITDKNVVFF 88
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N++I+++ ++ +LL++ + +G PD +TYP V KA + G ++HG V+K
Sbjct: 89 NVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLK 148
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
GL+ + YV N ++ MYG + +++ DE+P +DVVSWN +S + + RF DA+++
Sbjct: 149 IGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALEL 208
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKN----------LELGKE--------IHRYINQ 218
R M + NL P++ T+ S L A T + L+L K+ I Y+N
Sbjct: 209 CREM-EALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNN 267
Query: 219 ELE------FTPIMGN----------ALLDMYCKCGCLSEARELFDEMPNK----NVICW 258
+ ++ + N ++L Y LS R + K N++
Sbjct: 268 SMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLE 327
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
+++ Y CG L AR +F++ RD+V WT++I+ Y + + +AVA+F EM+ L
Sbjct: 328 NALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLN 387
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
PD V++L C+ G L+ G++ + E IT ++++ + G I++A
Sbjct: 388 PDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGF 447
Query: 379 FYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
++ E D W G + A ++S M IG+L+A L
Sbjct: 448 IRQMPLEPDERVW----------GPLLSACRVYSNM-----------NIGILAADKLLML 486
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
E ++ ++ +Y + + ++ R G I+K+P +N
Sbjct: 487 NPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKG--------IKKLPGISN 530
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 187/469 (39%), Positives = 278/469 (59%), Gaps = 21/469 (4%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK--ICNVKKLFDEMPDKDVVSWNVSISGHV 165
+++H ++KT D ++ V + +K+F M + S+N I
Sbjct: 5 KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALS 64
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP 224
+ DA+ VF M + C++ P+ T S AC + L G+++H + L+
Sbjct: 65 ESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDE 124
Query: 225 IMGNALLDMYCKCGCLSEARELF---------DEMPNK------NVICWTSMVSGYVNCG 269
+ + ++ MY CG + +A LF D + +K +V+ W M+ GYV G
Sbjct: 125 FVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIG 184
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLT 329
+LE AR+LFD P R +V W MI GY Q F EAV +FREMQ+ + P+ LV++L
Sbjct: 185 ELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLP 244
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
++LGALE GKW+H Y N I VD V+ +ALI+MYAKCG IEKAL++F L +++ +
Sbjct: 245 AMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVT 304
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMT 449
W++II GLAM+G+ L+ F M G P D+T+IG+LSACSH GLV+EGR FF+ M
Sbjct: 305 WSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMV 364
Query: 450 EVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
V ++P++EHYGC++DLLGRAGLL+E+EELI +P + +++I + ALL AC+++GNV
Sbjct: 365 RVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVI---WKALLGACKMHGNV 421
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+MG+++A L ++ DS + L+NIYAS WE V VR MKEM V
Sbjct: 422 EMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDV 470
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 228/499 (45%), Gaps = 113/499 (22%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
M LKQ+ AQ+ + ++P +L+ F H +L YA KIF S+ P +YN LI
Sbjct: 1 MQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLI 60
Query: 61 KAFAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+A ++ +LL+F ++ E V P+ FT+P VFKA G +++G +VHG VK GL
Sbjct: 61 RALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGL 120
Query: 120 EFDTYVCNSIMDMY---GVL---------------------------------------- 136
+ D +V ++++ MY GV+
Sbjct: 121 DSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGY 180
Query: 137 ---GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
G++ + LFDEMP + VVSWNV I+G+ + F++AV+VFR M Q + P+ T+
Sbjct: 181 VRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREM-QMAEVPPNYVTL 239
Query: 194 VSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
VS L A + L LELGK +H Y + + ++G+AL+DMY KCG + +A ++F+ +P
Sbjct: 240 VSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPK 299
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
+NV+ W+++++G G +A+D D F +M
Sbjct: 300 RNVVTWSTIIAGLAMHG---RAKDTLDH----------------------------FEDM 328
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ + P + LL+ C+ G + +G+W ++ + V + IE Y
Sbjct: 329 ERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHM----VRVSGL--EPRIEHYG----- 377
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
C + + G+ E +++ KPDD+ + +L AC
Sbjct: 378 ----------------------CMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGAC 415
Query: 433 SHGGLVDEGRRFFNTMTEV 451
G V+ G+R + E+
Sbjct: 416 KMHGNVEMGKRVAEHLMEL 434
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 142/284 (50%), Gaps = 10/284 (3%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G L A +F + ++++N++I +A+ G F++++ +F +++ V P+ T V
Sbjct: 184 GELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVL 243
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A+ LG ++ G+ VH Y V+ + D + ++++DMY G I ++F+ +P ++VV
Sbjct: 244 PAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVV 303
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W+ I+G R +D +D F M + +MP + T + LSAC+ + G+ +
Sbjct: 304 TWSTIIAGLAMHGRAKDTLDHFEDMERA-GVMPSDVTYIGLLSACSHAGLVNEGRWFFDH 362
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ + P + + ++D+ + G L E+ EL MP K + + W +++ G +E
Sbjct: 363 MVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVE 422
Query: 273 K----ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
A L + +P D + A+ N Y + E VA R M
Sbjct: 423 MGKRVAEHLMELAP-HDSGSYVALSNIYASLGNW-EGVAKVRLM 464
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 303/586 (51%), Gaps = 76/586 (12%)
Query: 90 TYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEM 149
T+ + K ++ G VH + GL ++ ++ +MY + + +++FD M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
P +D V+WN ++G+ + A++ RM+ + PD T+VS L AC + L
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 209 GKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
+E+H + + L+ + A+LD YCKCG + AR +FD MP +N + W +M+ GY +
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 268 CGQLEKARDLFDR--------------------------SPVR-------------DIVL 288
G +A LF R VR ++ +
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257
Query: 289 WTAMINGYVQFNRFDEAVALFRE--------------------------------MQIIR 316
A+I Y + R D A +F E MQ+
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317
Query: 317 LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKAL 376
++PD F LV+++ A + Q +WIHGY +++ D V TALI+MY+KCG + A
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIAR 377
Query: 377 EIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGG 436
+F R++ +W ++I G +G A+ELF +M G+ P++ TF+ VL+ACSH G
Sbjct: 378 RLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAG 437
Query: 437 LVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLY 496
LVDEG+++F +M + Y ++P +EHYG ++DLLGRAG LDEA I+ +P E + +Y
Sbjct: 438 LVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPG---ISVY 494
Query: 497 GALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEM 556
GA+L AC+++ NV++ E+ A ++ ++ ++ +H LLANIYA+A+ W+DV VR M++
Sbjct: 495 GAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKK 554
Query: 557 GVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
G++K PG S I++ +H F G +H K+IY+ L ++ + + D
Sbjct: 555 GLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKD 600
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSI-QSPCLLAYNLL 59
+ +++++ + ++GL N N L+ +L A ++F + +++N +
Sbjct: 236 LDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADL--AAQVFNELGNKKTRISWNAM 293
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I F + + LF++++ V PD+FT V AV + + + +HGY ++ L
Sbjct: 294 ILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQL 353
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ D YV +++DMY G++ ++LFD D+ V++WN I G+ + AV++F
Sbjct: 354 DQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEE 413
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKC 237
M+ G +P+E T +S L+AC+ ++ G++ + ++ P M + ++D+ +
Sbjct: 414 MK-GTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRA 472
Query: 238 GCLSEARELFDEMP 251
G L EA MP
Sbjct: 473 GKLDEAWSFIKNMP 486
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 189/605 (31%), Positives = 322/605 (53%), Gaps = 49/605 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A + G + N +N L+ + G L ++ + GS L+ +N ++ +
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAM--YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDT 123
+ ++L ++ GV PD FT V A L ++ G+++H Y +K G L+ ++
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V ++++DMY ++ + +++FD M D+ + WN I+G+ + ++A+ +F M +
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
L+ + T+ + AC + IH ++ + L+ + N L+DMY + G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F +M + RD+V W MI GYV
Sbjct: 459 AMRIFGKMED-------------------------------RDLVTWNTMITGYVFSEHH 487
Query: 303 DEAVALFREMQ-----------IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
++A+ L +MQ + LKP+ L+ +L CA L AL +GK IH Y +N
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ D V +AL++MYAKCG ++ + ++F ++ +K+ +W II M+G +A++L
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
M+ G KP+++TFI V +ACSH G+VDEG R F M Y ++P +HY C++DLLGRA
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G + EA +L+ +P + N+ + +LL A RI+ N+++GE A L ++E +S +
Sbjct: 668 GRIKEAYQLMNMMPRDFNK--AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LLANIY+SA W+ T VR+ MKE GVRK PGCS IE +H+F+ GD SH + +++
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785
Query: 592 MLDRM 596
L+ +
Sbjct: 786 YLETL 790
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 244/526 (46%), Gaps = 66/526 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI A +++ G + T+ +V + G+ K+F I +++N LI +
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLV-NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG---EVKKGEKVHGYVVKTGLEF 121
+ +L F + + V P +FT V A L + G++VH Y ++ G E
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 234
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
++++ N+++ MYG LGK+ + K L +D+V+WN +S + + +A++ R M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCG 238
+G PDE T+ S L AC+ L+ L GKE+H Y N L+ +G+AL+DMYC
Sbjct: 295 LEGVE--PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC--- 349
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
NC Q+ R +FD R I LW AMI GY Q
Sbjct: 350 ----------------------------NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 299 FNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
EA+ LF M+ L + + ++ C + GA + + IHG++ + + D
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM---- 413
V L++MY++ G I+ A+ IF ++ ++D +W ++I G + AL L +M
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 414 --ISGGA-----KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----YG 462
+S GA KP+ IT + +L +C+ + +G+ Y I+ L
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-----HAYAIKNNLATDVAVGS 556
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
L+D+ + G L + ++ +IP +N V + ++ A ++GN
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKN----VITWNVIIMAYGMHGN 598
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 225/488 (46%), Gaps = 40/488 (8%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ +Q+ ++P L T + A IF S QS + L+++ +
Sbjct: 17 LPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFIS-QSRSPEWWIDLLRSKVRS 75
Query: 67 GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY-V 125
R+++L + + G+ PDN+ +P + KAV L +++ G+++H +V K G D+ V
Sbjct: 76 NLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTV 135
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N+++++Y G V K+FD + +++ VSWN IS ++E A++ FR M N
Sbjct: 136 ANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE-N 194
Query: 186 LMPDEGTVVSTLSACTAL---KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSE 242
+ P T+VS ++AC+ L + L +GK++H Y ++ E + N L+ MY K G L+
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLAS 254
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
++ L ++++ W +++S QL
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLL------------------------------ 284
Query: 303 DEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATA 361
EA+ REM + ++PD+F + ++L C+ L L GK +H Y +N + ++ V +A
Sbjct: 285 -EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKP 420
L++MY C + +F + ++ W ++I G + N +AL LF M S G
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
+ T GV+ AC G + + + + L+D+ R G +D A +
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ-NTLMDMYSRLGKIDIAMRI 462
Query: 481 IRKIPNEN 488
K+ + +
Sbjct: 463 FGKMEDRD 470
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 199/587 (33%), Positives = 308/587 (52%), Gaps = 70/587 (11%)
Query: 42 EKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGW 100
E++F S+ ++YN LI F+ GS +S+ L+ L RE V P T +
Sbjct: 99 ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L + G VH V++ G +V + ++DMY +G I + +++F EM K VV +N
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218
Query: 161 ISGHVKCMRFEDA-------------------------------VDVFRRMR-QGCNLMP 188
I+G ++C EDA +DVFRRMR +G +
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGI-- 276
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELF 247
D+ T S L+AC AL LE GK+IH YI + E +G+AL+DMY K
Sbjct: 277 DQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSK----------- 325
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
C + A +F R R+I+ WTAMI GY Q +EAV
Sbjct: 326 --------------------CRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
F EMQ+ +KPD F L ++++ CA L +LE+G H + + V+ AL+ +Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIG 427
KCG IE A +F E+ D SWT+++ G A GK + ++LF +M++ G KPD +TFIG
Sbjct: 426 KCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIG 485
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
VLSACS GLV++G +F++M + + I P +HY C+IDL R+G EAEE I+++P+
Sbjct: 486 VLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS 545
Query: 488 NNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVT 547
+ + LLS+CR+ GN+++G+ A L + + ++ + + LL +++A+ +W +V
Sbjct: 546 PDAF---GWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVA 602
Query: 548 NVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
++R+ M++ V+K PGCS I+ +H F D SH IY L+
Sbjct: 603 HLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLE 649
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 215/447 (48%), Gaps = 34/447 (7%)
Query: 104 VKKGEKVHGYVVKTGLEFD-TYVCNSIMDMYGVLGKICNVKKLFDEMPD----------- 151
V+ VH ++KT L+ T++ N ++ Y G++ +++FDEMPD
Sbjct: 28 VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87
Query: 152 --------------------KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
+D VS+N I+G +V ++R + + ++ P
Sbjct: 88 ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147
Query: 192 TVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEM 250
T+ + + +AL + LG +H + + +G+ L+DMY K G + +AR +F EM
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207
Query: 251 PNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFR 310
K V+ + ++++G + C +E A+ LF RD + WT M+ G Q EA+ +FR
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267
Query: 311 EMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
M+ + D++ ++LT C L ALE+GK IH YI + V +AL++MY+KC
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCR 327
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLS 430
I A +F + ++ SWT++I G N +A+ FS+M G KPDD T V+S
Sbjct: 328 SIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVIS 387
Query: 431 ACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
+C++ ++EG + F+ + V + + L+ L G+ G +++A L ++ +
Sbjct: 388 SCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 446
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAA 517
L + +D+ EK+ A
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLA 473
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 124/249 (49%), Gaps = 8/249 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
AE +F + ++++ +I + + +++ FS+++ G+ PD+FT V +
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L +++G + H + +GL V N+++ +YG G I + +LFDEM D VSW
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
++G+ + + ++ +D+F +M L PD T + LSAC+ +E G + + ++
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLAN-GLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE----K 273
PI + ++D+Y + G EA E +MP+ + W +++S G +E
Sbjct: 511 GIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWA 570
Query: 274 ARDLFDRSP 282
A +L + P
Sbjct: 571 AENLLETDP 579
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A ++F + +++ L+ +A+ G ++++ LF K+ G+ PD T+ V
Sbjct: 428 GSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVL 487
Query: 96 KAVGWLGEVKKG-------EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
A G V+KG +K HG V D Y C ++D+Y G+ ++ +
Sbjct: 488 SACSRAGLVEKGCDYFDSMQKDHGIVPID----DHYTC--MIDLYSRSGRFKEAEEFIKQ 541
Query: 149 MP-DKDVVSWNVSIS 162
MP D W +S
Sbjct: 542 MPHSPDAFGWATLLS 556
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 271/461 (58%), Gaps = 17/461 (3%)
Query: 144 KLFDEMP---DKDVVSWNVSISGHVKCMRFED----AVDVFRRMRQGCNLMPDEGTVVST 196
K F P +DVVSW +IS + R D A + + P++ T+++
Sbjct: 19 KEFQRAPRHAPRDVVSWTSTIS---RAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTV 75
Query: 197 LSACTALKNLELGKEIHRYIN-QELEFTP---IMGNALLDMYCKCGCLSEARELFDEMPN 252
LSAC + L + ++ + L+ P ++ L Y A +LFD MP
Sbjct: 76 LSACADSPSSPLASPLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDSMPV 135
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
++V+ + +M+SG + G ++ A ++FD P D V WTA+I+G+V+ R DEA+ FR M
Sbjct: 136 RSVVTYNTMISGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAM 195
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
+ ++ D LVA+++ CA++GAL G W+H + R+ + VA +LI+MYA+CG +
Sbjct: 196 LLDGVETDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQV 255
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
A ++F +R++ SW S+I G A NG+ A+ELF +M G KPD +T GVL+AC
Sbjct: 256 NLAAQVFRSIRKRTVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTAC 315
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SH GL + G R+++ MT Y + ++EHYGC++DLLGRAG LDEA ++ +P NE++
Sbjct: 316 SHAGLTEHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVV 375
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+ GALL+ CR +GN+DM E++ L +++ + + + LL+NIYA+ +W+ VR
Sbjct: 376 L---GALLAGCRTHGNLDMAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSL 432
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
MK GV+K PG S++EI+G +HEF+ GD SH EI ML
Sbjct: 433 MKARGVKKRPGHSTVEIDGDVHEFVSGDQSHPLAGEIGQML 473
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + P +++ LI F K G +++ F + GV D T V A
Sbjct: 157 AFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLVAVVSACAE 216
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+G + G VH V++ LE + V NS++DMY G++ ++F + + VVSWN
Sbjct: 217 VGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFRSIRKRTVVSWNSM 276
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
I G R DA+++F MR+ PD T+ L+AC+ E G + + E
Sbjct: 277 IVGFAANGRCTDAIELFEEMRRQ-GFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEY 335
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLEKA--- 274
M + ++D+ + G L EA + + MP + N + ++++G G L+ A
Sbjct: 336 GVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRTHGNLDMAEQM 395
Query: 275 -RDLFDRSPVRDIVLWTAMINGYVQFNRFDEA 305
+ LF+ P D + + N Y ++D A
Sbjct: 396 MQHLFELDPQGD-ANYVLLSNIYAAVGKWDGA 426
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 303/553 (54%), Gaps = 44/553 (7%)
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
D F + + GE+ K+ + + D + N+++ +Y G + +++ +F
Sbjct: 57 DTFIHNRLLNLYAKSGEISHARKLFDEMTQR----DNFSWNAMLSLYAKSGLVEDLRVIF 112
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
D MP +D VS+N ISG R A+ VF RM Q L P E T VS L+ACT L +L
Sbjct: 113 DNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRM-QKEGLKPTEYTHVSVLNACTQLLDL 171
Query: 207 ELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
GK+IH R I L + NAL D+Y +CG + +AR LFD M +NV+ W M+SGY
Sbjct: 172 RRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGY 231
Query: 266 VNCGQLEKARDLFDRSPV-----------------------------------RDIVLWT 290
+ Q EK DLF V +D V WT
Sbjct: 232 LKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWT 291
Query: 291 AMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN 350
MI G Q + ++A+ LF EM + +PD + + ++++ CA+L +L G+ +HG
Sbjct: 292 IMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLM 351
Query: 351 RITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELF 410
+ D +V++AL++MY KCG+ A IF ++ ++ SW S+I G A+NG+ +AL L+
Sbjct: 352 GVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLY 411
Query: 411 SQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
M+ KPD +TF+GVLSAC H GLV+EG+ +F +M++ + ++P +HY C+++L GR
Sbjct: 412 ENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGR 471
Query: 471 AGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFH 530
+G +D+A +LI + E N +I + +LS C + G++ GE A L ++ ++ +
Sbjct: 472 SGHMDKAVDLISSMSQEPNSLI---WTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPY 528
Query: 531 TLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIY 590
+L+N+YA+ RW+DV ++R MK V+K S IEI+ +H+F+ D +H + K I+
Sbjct: 529 IMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIH 588
Query: 591 SMLDRMAKTLLDS 603
L+R+ + L ++
Sbjct: 589 VQLNRLIRKLQEA 601
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 173/406 (42%), Gaps = 80/406 (19%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI +I L N N L + G + A ++F + ++ +NL+I +
Sbjct: 175 KQIHGRIIICNLGGNVFVCNALTDL--YARCGEIDQARRLFDRMVIRNVVTWNLMISGYL 232
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
K K + LF +++ + PD T
Sbjct: 233 KNRQPEKCIDLFHEMQVSNLKPDQVT---------------------------------- 258
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+S++ Y G I +K+F E+ +KD V W + I G + + EDA+ +F M
Sbjct: 259 -ASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLE- 316
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-----INQELEFTPIMGNALLDMYCKCGC 239
N PD T+ S +S+C L +L G+ +H +N +L ++ +AL+DMYCKCG
Sbjct: 317 NARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDL----LVSSALVDMYCKCGV 372
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
+A +F M +NV+ W SM+ GY GQ DL
Sbjct: 373 TRDAWTIFSTMQTRNVVSWNSMIGGYALNGQ-----DL---------------------- 405
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVV 358
EA++L+ M LKPD V +L+ C G +E+GK + +++ +
Sbjct: 406 ----EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDH 461
Query: 359 ATALIEMYAKCGLIEKALEIFYEL-REKDAASWTSIICGLAMNGKI 403
++ ++ + G ++KA+++ + +E ++ WT+++ M G I
Sbjct: 462 YACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDI 507
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 161/346 (46%), Gaps = 20/346 (5%)
Query: 20 PETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL 79
P+ + V + G + A K+FG I+ + + ++I A+ G +LLLFS++
Sbjct: 254 PDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEM 313
Query: 80 RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKI 139
PD +T V + L + G+ VHG G+ D V ++++DMY G
Sbjct: 314 LLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVT 373
Query: 140 CNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSA 199
+ +F M ++VVSWN I G+ + +A+ ++ M + NL PD T V LSA
Sbjct: 374 RDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEE-NLKPDSVTFVGVLSA 432
Query: 200 CTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK-NVI 256
C +E GKE ++ + LE TP +++++ + G + +A +L M + N +
Sbjct: 433 CVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSL 492
Query: 257 CWTSMVSGYVNCGQLEK----ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
WT+++S V G ++ AR L + +P + V + + N Y R+ + ++ M
Sbjct: 493 IWTTVLSVCVMKGDIKHGEMAARCLIELNPF-NAVPYIMLSNMYAARGRWKDVASIRSLM 551
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ +K KF + +E +H ++ ++R DA +
Sbjct: 552 KSKHVK--KF---------SAYSWIEIDNEVHKFVADDRTHPDAKI 586
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 240/371 (64%), Gaps = 4/371 (1%)
Query: 224 PIMGNALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
P +L+ YC CG ++ AR +FDE + +V+ W M+ GYV G L +AR+LFD P
Sbjct: 110 PHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKSGDLARARELFDVMP 169
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKW 342
R++V WT +I Y Q + +EA+ +FR MQ+ ++PD L+++L+ C LG ++ G+W
Sbjct: 170 GRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEW 229
Query: 343 IHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGK 402
+H ++ + + + A+I+MY KCG ++KALE+F + +K +WT++I G A++G
Sbjct: 230 VHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGL 289
Query: 403 INKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG 462
+A+ELF +M P+DITF+ VLS CSH GL D GR +F TM Y+I+P++EHYG
Sbjct: 290 GLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYG 349
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKI 522
C+IDLLGRAG L EA LI+ +P + N I +GALL+A R +G+ ++GE+ L ++
Sbjct: 350 CMIDLLGRAGCLMEARGLIQDMPFKANAAI---WGALLAAARTHGDTELGEQALLHLIEL 406
Query: 523 ESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPS 582
E +S + LL+NIYA RW+ V +R M++ G+R VPG SSI+++G++HEF D S
Sbjct: 407 EPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDGMVHEFTSRDGS 466
Query: 583 HSEMKEIYSML 593
H + +I +L
Sbjct: 467 HPSLHKIREVL 477
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 161/331 (48%), Gaps = 40/331 (12%)
Query: 75 LFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYG 134
L S L G + D + +A G V +V +T D N ++D Y
Sbjct: 97 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFD---ETAASADVVSWNVMIDGYV 153
Query: 135 VLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVV 194
G + ++LFD MP ++VVSW + I + + + E+A++VFRRM Q + PD ++
Sbjct: 154 KSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRM-QVEGIEPDGVALL 212
Query: 195 STLSACTALKNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
S LSAC L ++LG+ +HR++ + + P+M NA++DMY KCG + +A E+F+ M
Sbjct: 213 SVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLM-NAIIDMYVKCGSVKKALEVFEGMEQ 271
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K+++ WT+M++G+ G G EAV LFR M
Sbjct: 272 KSIVTWTTMIAGFALHGL------------------------GL-------EAVELFRRM 300
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKW-IHGYINENRITVDAVVATALIEMYAKCGL 371
+ + P+ +A+L+ C+ +G + G+W +++ +I +I++ + G
Sbjct: 301 EKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGC 360
Query: 372 IEKALEIFYELREK-DAASWTSIICGLAMNG 401
+ +A + ++ K +AA W +++ +G
Sbjct: 361 LMEARGLIQDMPFKANAAIWGALLAAARTHG 391
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 129/240 (53%), Gaps = 4/240 (1%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F + ++++ ++I A+A+ +++ +F +++ G+ PD V
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 215
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A G LG V GE VH +V++ GL + + N+I+DMY G + ++F+ M K +V
Sbjct: 216 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W I+G +AV++FRRM + N+ P++ T ++ LS C+ + +LG+ +
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKE-NVSPNDITFLAVLSVCSHVGLTDLGRWYFKT 334
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQLE 272
+ + + P + + ++D+ + GCL EAR L +MP K N W ++++ G E
Sbjct: 335 MVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTE 394
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 189/605 (31%), Positives = 322/605 (53%), Gaps = 49/605 (8%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQ+ A + G + N +N L+ + G L ++ + GS L+ +N ++ +
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAM--YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LEFDT 123
+ ++L ++ GV PD FT V A L ++ G+++H Y +K G L+ ++
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V ++++DMY ++ + +++FD M D+ + WN I+G+ + ++A+ +F M +
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSE 242
L+ + T+ + AC + IH ++ + L+ + N L+DMY + G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 243 ARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRF 302
A +F +M + RD+V W MI GYV
Sbjct: 459 AMRIFGKMED-------------------------------RDLVTWNTMITGYVFSEHH 487
Query: 303 DEAVALFREMQ-----------IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENR 351
++A+ L +MQ + LKP+ L+ +L CA L AL +GK IH Y +N
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 352 ITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFS 411
+ D V +AL++MYAKCG ++ + ++F ++ +K+ +W II M+G +A++L
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 412 QMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRA 471
M+ G KP+++TFI V +ACSH G+VDEG R F M Y ++P +HY C++DLLGRA
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667
Query: 472 GLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHT 531
G + EA +L+ +P + N+ + +LL A RI+ N+++GE A L ++E +S +
Sbjct: 668 GRIKEAYQLMNMMPRDFNK--AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725
Query: 532 LLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYS 591
LLANIY+SA W+ T VR+ MKE GVRK PGCS IE +H+F+ GD SH + +++
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785
Query: 592 MLDRM 596
L+ +
Sbjct: 786 YLETL 790
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 244/526 (46%), Gaps = 66/526 (12%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI A +++ G + T+ +V + G+ K+F I +++N LI +
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLV-NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG---EVKKGEKVHGYVVKTGLEF 121
+ +L F + + V P +FT V A L + G++VH Y ++ G E
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 234
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM- 180
++++ N+++ MYG LGK+ + K L +D+V+WN +S + + +A++ R M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCG 238
+G PDE T+ S L AC+ L+ L GKE+H Y N L+ +G+AL+DMYC
Sbjct: 295 LEGVE--PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC--- 349
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
NC Q+ R +FD R I LW AMI GY Q
Sbjct: 350 ----------------------------NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 299 FNRFDEAVALFREMQ-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
EA+ LF M+ L + + ++ C + GA + + IHG++ + + D
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM---- 413
V L++MY++ G I+ A+ IF ++ ++D +W ++I G + AL L +M
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 414 --ISGGA-----KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEH----YG 462
+S GA KP+ IT + +L +C+ + +G+ Y I+ L
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-----HAYAIKNNLATDVAVGS 556
Query: 463 CLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGN 508
L+D+ + G L + ++ +IP +N V + ++ A ++GN
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKN----VITWNVIIMAYGMHGN 598
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 224/486 (46%), Gaps = 40/486 (8%)
Query: 9 AQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGS 68
+Q+ ++P L T + A IF S QS + L+++ +
Sbjct: 19 SQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFIS-QSRSPEWWIDLLRSKVRSNL 77
Query: 69 FRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY-VCN 127
R+++L + + G+ PDN+ +P + KAV L +++ G+++H +V K G D+ V N
Sbjct: 78 LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 128 SIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLM 187
+++++Y G V K+FD + +++ VSWN IS ++E A++ FR M N+
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE-NVE 196
Query: 188 PDEGTVVSTLSACTAL---KNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
P T+VS ++AC+ L + L +GK++H Y ++ E + N L+ MY K G L+ ++
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
L ++++ W +++S QL E
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLL-------------------------------E 285
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALI 363
A+ REM + ++PD+F + ++L C+ L L GK +H Y +N + ++ V +AL+
Sbjct: 286 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDD 422
+MY C + +F + ++ W ++I G + N +AL LF M S G +
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 405
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
T GV+ AC G + + + + L+D+ R G +D A +
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ-NTLMDMYSRLGKIDIAMRIFG 464
Query: 483 KIPNEN 488
K+ + +
Sbjct: 465 KMEDRD 470
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,463,063,169
Number of Sequences: 23463169
Number of extensions: 394648681
Number of successful extensions: 1122263
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9967
Number of HSP's successfully gapped in prelim test: 2114
Number of HSP's that attempted gapping in prelim test: 875795
Number of HSP's gapped (non-prelim): 70614
length of query: 619
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 470
effective length of database: 8,863,183,186
effective search space: 4165696097420
effective search space used: 4165696097420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)