BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007077
(619 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/557 (62%), Positives = 441/557 (79%), Gaps = 2/557 (0%)
Query: 48 IQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKG 107
+Q+P LL YN ++K+ A SF K L LF +LR +G+ PDNFT P V K++G L +V +G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC 167
EKVHGY VK GLEFD+YV NS+M MY LGKI K+FDEMP +DVVSWN IS +V
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 168 MRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMG 227
RFEDA+ VF+RM Q NL DEGT+VSTLSAC+ALKNLE+G+ I+R++ E E + +G
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
NAL+DM+CKCGCL +AR +FD M +KNV CWTSMV GYV+ G++++AR LF+RSPV+D+V
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
LWTAM+NGYVQFNRFDEA+ LFR MQ ++PD F+LV+LLTGCAQ GALEQGKWIHGYI
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
NENR+TVD VV TAL++MYAKCG IE ALE+FYE++E+D ASWTS+I GLAMNG +AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
+L+ +M + G + D ITF+ VL+AC+HGG V EGR+ F++MTE + +QPK EH CLIDL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
L RAGLLDEAEELI K+ E++E +VP+Y +LLSA R YGNV + E++A LEK+E DS
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP--SHSE 585
S HTLLA++YASANRWEDVTNVR+KMK++G+RK PGCSSIEI+G+ HEF+VGD SH +
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545
Query: 586 MKEIYSMLDRMAKTLLD 602
M EI SML + +LD
Sbjct: 546 MDEINSMLHQTTNLMLD 562
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 193/427 (45%), Gaps = 69/427 (16%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+++ + GL+ + N LM + S G + K+F + ++++N LI ++
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGM--YASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 65 KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G F ++ +F ++ +E + D T A L ++ GE+++ +VV T E
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSV 182
Query: 124 YVCNSIMDM-------------------------------YGVLGKICNVKKLFDEMPDK 152
+ N+++DM Y G+I + LF+ P K
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
DVV W ++G+V+ RF++A+++FR M Q + PD +VS L+ C LE GK I
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCM-QTAGIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 213 HRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H YIN+ + ++G AL+DMY KCGC+ A E+F E+ ++ WTS++ G G
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGC 331
+A D L+ EM+ + ++ D VA+LT C
Sbjct: 362 GRALD-------------------------------LYYEMENVGVRLDAITFVAVLTAC 390
Query: 332 AQLGALEQGKWI-HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
G + +G+ I H + + + + LI++ + GL+++A E+ ++R + +
Sbjct: 391 NHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETL 450
Query: 391 TSIICGL 397
+ C L
Sbjct: 451 VPVYCSL 457
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 142/301 (47%), Gaps = 11/301 (3%)
Query: 27 MVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSP 86
MVF + S G + A +F ++ + ++ + + F ++L LF ++ G+ P
Sbjct: 219 MVF-GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRP 277
Query: 87 DNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLF 146
DNF + G +++G+ +HGY+ + + D V +++DMY G I ++F
Sbjct: 278 DNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVF 337
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
E+ ++D SW I G A+D++ M + + D T V+ L+AC +
Sbjct: 338 YEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM-ENVGVRLDAITFVAVLTACNHGGFV 396
Query: 207 ELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNKN----VICWTS 260
G++I + + P + L+D+ C+ G L EA EL D+M ++ V + S
Sbjct: 397 AEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCS 456
Query: 261 MVSGYVNCGQL---EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
++S N G + E+ + ++ V D T + + Y NR+++ + R+M+ + +
Sbjct: 457 LLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGI 516
Query: 318 K 318
+
Sbjct: 517 R 517
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/607 (40%), Positives = 388/607 (63%), Gaps = 8/607 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ LKQIQAQ+ GL +P ++L+ FC L Y+ KI I++P + ++N+ I
Sbjct: 66 LLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTI 125
Query: 61 KAFAKKGSFRKSLLLFSKLRERGV---SPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
+ F++ + ++S LL+ ++ G PD+FTYP +FK L G + G+V+K
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
LE ++V N+ + M+ G + N +K+FDE P +D+VSWN I+G+ K E A+ V+
Sbjct: 186 RLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY 245
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCK 236
+ M + + PD+ T++ +S+C+ L +L GKE + Y+ + L T + NAL+DM+ K
Sbjct: 246 KLM-ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSK 304
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG + EAR +FD + + ++ WT+M+SGY CG L+ +R LFD +D+VLW AMI G
Sbjct: 305 CGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ R +A+ALF+EMQ KPD+ ++ L+ C+QLGAL+ G WIH YI + ++++
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
+ T+L++MYAKCG I +AL +F+ ++ +++ ++T+II GLA++G + A+ F++MI
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
G PD+ITFIG+LSAC HGG++ GR +F+ M + + P+L+HY ++DLLGRAGLL+E
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A+ L+ +P E + + +GALL CR++GNV++GEK A L +++ DS + LL +
Sbjct: 545 ADRLMESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGM 601
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
Y AN WED R+ M E GV K+PGCSSIE+NGI+ EF+V D S E ++IY L +
Sbjct: 602 YGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661
Query: 597 AKTLLDS 603
+ + S
Sbjct: 662 GRHMRSS 668
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/598 (39%), Positives = 385/598 (64%), Gaps = 6/598 (1%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
Q KQ+ +Q G+ NP KL VF G++ YA K+F I P ++ +N +IK
Sbjct: 49 QFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 108
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG-EVKKGEKVHGYVVKTGLEF 121
++K + + L+ + + GV+PD+ T+PF+ + G + G+K+H +VVK GL
Sbjct: 109 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 168
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ YV N+++ MY + G + + +FD +DV SWN+ ISG+ + +E+++++ M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCL 240
+ + P T++ LSAC+ +K+ +L K +H Y+++ + E + + NAL++ Y CG +
Sbjct: 229 RNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
A +F M ++VI WTS+V GYV G L+ AR FD+ PVRD + WT MI+GY++
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
F+E++ +FREMQ + PD+F +V++LT CA LG+LE G+WI YI++N+I D VV
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
ALI+MY KCG EKA ++F+++ ++D +WT+++ GLA NG+ +A+++F QM +P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
DDIT++GVLSAC+H G+VD+ R+FF M ++I+P L HYGC++D+LGRAGL+ EA E+
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
+RK+P N I+ +GALL A R++ + M E A + ++E + + + LL NIYA
Sbjct: 528 LRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGC 584
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
RW+D+ VR+K+ ++ ++K PG S IE+NG HEF+ GD SH + +EIY L+ +A+
Sbjct: 585 KRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/617 (37%), Positives = 372/617 (60%), Gaps = 16/617 (2%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QLKQ + + G +P + +KL S +L YA K+F I P A+N LI
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 61 KAFAKKGSFRKSLLLF-SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+A+A S+ F + E P+ +T+PF+ KA + + G+ +HG VK+ +
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++ Y G + + K+F + +KDVVSWN I+G V+ + A+++F++
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCG 238
M + ++ T+V LSAC ++NLE G+++ YI + + + NA+LDMY KCG
Sbjct: 223 M-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ +A+ LFD M K+ + WT+M+ GY E AR++ + P +DIV W A+I+ Y Q
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 299 FNRFDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ +EA+ +F E+Q+ + +K ++ LV+ L+ CAQ+GALE G+WIH YI ++ I ++
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V +ALI MY+KCG +EK+ E+F + ++D W+++I GLAM+G N+A+++F +M
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
KP+ +TF V ACSH GLVDE F+ M Y I P+ +HY C++D+LGR+G L++A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 478 EELIRKIPNENNEIIVP---LYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
+ I +P I P ++GALL AC+I+ N+++ E L ++E ++ H LL+
Sbjct: 522 VKFIEAMP------IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
NIYA +WE+V+ +R+ M+ G++K PGCSSIEI+G+IHEFL GD +H +++Y L
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 595 RMAKTLLDSKQNAMEGD 611
+ + L K N E +
Sbjct: 636 EVMEKL---KSNGYEPE 649
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/631 (38%), Positives = 372/631 (58%), Gaps = 70/631 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCT-HPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ L+ I AQ+ +IGL L+KL+ FC P L YA +F +IQ P LL +N +
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ A +L L+ + G+ P+++T+PFV K+ K+G+++HG+V+K G
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 120 EFDTYVCNSIMDMY-------------------------------GVLGKICNVKKLFDE 148
+ D YV S++ MY G I N +KLFDE
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
+P KDVVSWN ISG+ + +++A+++F+ M + N+ PDE T+V+ +SAC ++EL
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIEL 284
Query: 209 GKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+++H +I+ + + + NAL+D+Y KCG
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCG----------------------------- 315
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+LE A LF+R P +D++ W +I GY N + EA+ LF+EM P+ ++++
Sbjct: 316 --ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 328 LTGCAQLGALEQGKWIHGYINE--NRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
L CA LGA++ G+WIH YI++ +T + + T+LI+MYAKCG IE A ++F + K
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+SW ++I G AM+G+ + + +LFS+M G +PDDITF+G+LSACSH G++D GR F
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 493
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
TMT+ Y++ PKLEHYGC+IDLLG +GL EAEE+I + E + +I + +LL AC++
Sbjct: 494 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI---WCSLLKACKM 550
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
+GNV++GE A L KIE ++ + LL+NIYASA RW +V R + + G++KVPGCS
Sbjct: 551 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
SIEI+ ++HEF++GD H +EIY ML+ M
Sbjct: 611 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/602 (36%), Positives = 353/602 (58%), Gaps = 8/602 (1%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPC-LLAYNLL 59
+ +KQ+ A I + + + L S NL YA +F SI SP + +N
Sbjct: 25 LNHIKQLHAHILRTVINHKLNSF--LFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPF 82
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
++ ++ R ++L + ++R G D F++ + KAV + + +G ++HG K
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V MDMY G+I + +FDEM +DVV+WN I + + ++A +F
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG 238
M+ N+MPDE + + +SAC N+ + I+ + I ++ + AL+ MY G
Sbjct: 203 MKDS-NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAG 261
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
C+ ARE F +M +N+ T+MVSGY CG+L+ A+ +FD++ +D+V WT MI+ YV+
Sbjct: 262 CMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE 321
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ EA+ +F EM +KPD + ++++ CA LG L++ KW+H I+ N + + +
Sbjct: 322 SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI 381
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
ALI MYAKCG ++ ++F ++ ++ SW+S+I L+M+G+ + AL LF++M
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
+P+++TF+GVL CSH GLV+EG++ F +MT+ Y I PKLEHYGC++DL GRA LL EA
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+I +P +N +I +G+L+SACRI+G +++G+ A + ++E L++NIYA
Sbjct: 502 EVIESMPVASNVVI---WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYA 558
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
RWEDV N+R+ M+E V K G S I+ NG HEFL+GD H + EIY+ LD +
Sbjct: 559 REQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Query: 599 TL 600
L
Sbjct: 619 KL 620
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/593 (37%), Positives = 353/593 (59%), Gaps = 14/593 (2%)
Query: 10 QIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSF 69
Q+F Q+N T N ++ T G L A+ +F S+ +N ++ FA+
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKL--GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 70 RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSI 129
++L F+ + + G + +++ V A L ++ KG +VH + K+ D Y+ +++
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 130 MDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPD 189
+DMY G + + +++FDEM D++VVSWN I+ + +A+DVF+ M + + PD
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPD 252
Query: 190 EGTVVSTLSACTALKNLELGKEIHRYI--NQELEFTPIMGNALLDMYCKCGCLSEARELF 247
E T+ S +SAC +L +++G+E+H + N +L I+ NA +DMY KC + EAR +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 248 DEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVA 307
D MP +NVI TSM+SGY + AR +F + R++V W A+I GY Q +EA++
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH------GYINENRITVDAVVATA 361
LF ++ + P + +L CA L L G H G+ ++ D V +
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 362 LIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPD 421
LI+MY KCG +E+ +F ++ E+D SW ++I G A NG N+ALELF +M+ G KPD
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 422 DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELI 481
IT IGVLSAC H G V+EGR +F++MT + + P +HY C++DLLGRAG L+EA+ +I
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMI 552
Query: 482 RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASAN 541
++P + + +I +G+LL+AC+++ N+ +G+ +A L ++E +S + LL+N+YA
Sbjct: 553 EEMPMQPDSVI---WGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
Query: 542 RWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+WEDV NVR+ M++ GV K PGCS I+I G H F+V D SH K+I+S+LD
Sbjct: 610 KWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 140/261 (53%)
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
N L+D Y KCG L + R++FD+MP +N+ W S+V+G G L++A LF P RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
W +M++G+ Q +R +EA+ F M +++ ++L+ C+ L + +G +H I
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
++ D + +AL++MY+KCG + A +F E+ +++ SW S+I NG +AL
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
++F M+ +PD++T V+SAC+ + G+ + + +++ + +D+
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 468 LGRAGLLDEAEELIRKIPNEN 488
+ + EA + +P N
Sbjct: 299 YAKCSRIKEARFIFDSMPIRN 319
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 225/502 (44%), Gaps = 113/502 (22%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
VH V+K+G + ++ N ++D Y G + + +++FD+MP +++ +WN ++G K
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 170 FEDAVDVFRRM--RQGCN----------------------LMPDEGTVV------STLSA 199
++A +FR M R C +M EG V+ S LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 200 CTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
C+ L ++ G ++H I + + + +G+AL+DMY KCG +++A+ +FDEM ++NV+ W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 259 TSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
S+++ + G +A D +F+ M R++
Sbjct: 222 NSLITCFEQNGPAVEALD-------------------------------VFQMMLESRVE 250
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALE 377
PD+ L ++++ CA L A++ G+ +HG + +N ++ D +++ A ++MYAKC I++A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 378 I-------------------------------FYELREKDAASWTSIICGLAMNGKINKA 406
I F ++ E++ SW ++I G NG+ +A
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG-RRFFNTMTEVYQIQPKLEHY---- 461
L LF + P +F +L AC+ + G + + + ++ Q E
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNEN----NEIIVPLYGALLSACRIYGNVDMGEKLAA 517
LID+ + G ++E + RK+ + N +I+ A YGN E L
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF------AQNGYGN----EALEL 480
Query: 518 LLEKIESKDSSFHTLLANIYAS 539
E +ES + H + + ++
Sbjct: 481 FREMLESGEKPDHITMIGVLSA 502
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 47/208 (22%)
Query: 320 DKFILVALLTGC--AQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
D LL C ++L A+ +++H + ++ + + + LI+ Y+KCG +E +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELF-----------SQMISGGAKPD----- 421
+F ++ +++ +W S++ GL G +++A LF + M+SG A+ D
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 422 ---------------DITFIGVLSACSHGGLVDEGRRFFNTMTEVYQI---QPKLEHY-- 461
+ +F VLSACS GL D N +V+ + P L
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACS--GLND-----MNKGVQVHSLIAKSPFLSDVYI 189
Query: 462 -GCLIDLLGRAGLLDEAEELIRKIPNEN 488
L+D+ + G +++A+ + ++ + N
Sbjct: 190 GSALVDMYSKCGNVNDAQRVFDEMGDRN 217
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/596 (36%), Positives = 356/596 (59%), Gaps = 9/596 (1%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
QI I ++G ++ N L+ F + G L A K+F + ++++ +I +A+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 66 KGSFRKSL-LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ + ++ L F +R+ V+P++ T V A L +++ GEKV+ ++ +G+E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
+ ++++DMY I K+LFDE ++ N S +V+ +A+ VF M
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS- 331
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
+ PD +++S +S+C+ L+N+ GK H Y+ E + NAL+DMY KC A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+FD M NK V+ W S+V+GYV G+++ A + F+ P ++IV W +I+G VQ + F+
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 304 EAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATAL 362
EA+ +F MQ + D ++++ + C LGAL+ KWI+ YI +N I +D + T L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 363 IEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDD 422
++M+++CG E A+ IF L +D ++WT+ I +AM G +A+ELF MI G KPD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 423 ITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIR 482
+ F+G L+ACSHGGLV +G+ F +M +++ + P+ HYGC++DLLGRAGLL+EA +LI
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 483 KIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANR 542
+P E N++I + +LL+ACR+ GNV+M A ++ + + + + LL+N+YASA R
Sbjct: 632 DMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688
Query: 543 WEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAK 598
W D+ VR MKE G+RK PG SSI+I G HEF GD SH EM I +MLD +++
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 248/522 (47%), Gaps = 69/522 (13%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMV-FCTHPSHGNLLYAEKIFGSIQS--PCLLAYNLL 59
+LK + + GL + T+ KL+ C + +L +A+++F + +S C + YN L
Sbjct: 47 ELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM-YNSL 105
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ +A G +++LLF ++ G+SPD +T+PF A G ++HG +VK G
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V NS++ Y G++ + +K+FDEM +++VVSW I G+ + +DAVD+F R
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCG 238
M + + P+ T+V +SAC L++LE G++++ +I N +E +M +AL+DMY KC
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
+ A+ LFDE N+ +M S YV G
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR-------------------------- 319
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
EA+ +F M ++PD+ +++ ++ C+QL + GK HGY+ N +
Sbjct: 320 -----EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM----- 413
ALI+MY KC + A IF + K +W SI+ G NG+++ A E F M
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 414 ------ISG---------------------GAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
ISG G D +T + + SAC H G +D + +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ E IQ + L+D+ R G + A + + N +
Sbjct: 495 YI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/600 (37%), Positives = 343/600 (57%), Gaps = 54/600 (9%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ Q+KQ+ AQI + L ++ KL+ + NL A ++F +Q P + N LI
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVHLCNSLI 89
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAV---GWLGEVKKGEKVHGYVVKT 117
+A A+ ++ +FS+++ G+ DNFTYPF+ KA WL VK +H ++ K
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVK---MMHNHIEKL 146
Query: 118 GLEFDTYVCNSIMDMYGVLG--KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVD 175
GL D YV N+++D Y G + + KLF++M ++D VSWN + G VK DA
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 176 VFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYC 235
+F M Q ++L I N +LD Y
Sbjct: 207 LFDEMPQ---------------------RDL------------------ISWNTMLDGYA 227
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RDIVLWTAMI 293
+C +S+A ELF++MP +N + W++MV GY G +E AR +FD+ P+ +++V WT +I
Sbjct: 228 RCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
GY + EA L +M LK D ++++L C + G L G IH + + +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+A V AL++MYAKCG ++KA ++F ++ +KD SW +++ GL ++G +A+ELFS+M
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G +PD +TFI VL +C+H GL+DEG +F +M +VY + P++EHYGCL+DLLGR G
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L EA ++++ +P E N +I +GALL ACR++ VD+ +++ L K++ D ++LL
Sbjct: 468 LKEAIKVVQTMPMEPNVVI---WGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLL 524
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIYA+A WE V ++R KMK MGV K G SS+E+ IHEF V D SH + +IY ML
Sbjct: 525 SNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/575 (36%), Positives = 331/575 (57%), Gaps = 38/575 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTH-PSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L Q+ + + + +N L++L+ FCT P NL YA +F SI P + +N +
Sbjct: 19 LVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSM 78
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+ ++ + K+L+ + ++ +G SPD FT+P+V KA L +++ G VHG+VVKTG
Sbjct: 79 IRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGF 138
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E + YV ++ MY G++ ++F+++P +VV+W ISG V RF DA++ FR
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFRE 198
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGC 239
M Q + +E +V L AC K++ GK H ++ Q L F P
Sbjct: 199 M-QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL-QGLGFDP--------------- 241
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
F NVI TS++ Y CG L AR LFD P R +V W ++I GY Q
Sbjct: 242 ------YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 300 NRFDEAVALFREMQIIRLKPDKF-----ILVALLTGCAQLGALEQGKWIHGYINENRITV 354
+EA+ +F +M + + PDK I +++ GC+QLG + IH Y+++
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG-----QSIHAYVSKTGFVK 350
Query: 355 DAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMI 414
DA + AL+ MYAK G E A + F +L +KD +WT +I GLA +G N+AL +F +M
Sbjct: 351 DAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQ 410
Query: 415 -SGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G A PD IT++GVL ACSH GLV+EG+R+F M +++ ++P +EHYGC++D+L RAG
Sbjct: 411 EKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGR 470
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
+EAE L++ +P + N V ++GALL+ C I+ N+++ +++ +++ + E S + LL
Sbjct: 471 FEEAERLVKTMPVKPN---VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLL 527
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+NIYA A RW DV +R+ MK V KV G SS+E
Sbjct: 528 SNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/570 (39%), Positives = 329/570 (57%), Gaps = 44/570 (7%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSP-CLLAYNLLIKA 62
KQIQ Q+ L ++ +NK++ F S Y+ I SI+S +YN L+ +
Sbjct: 22 FKQIQTQLITRDLLRDDLIINKVVTFLG-KSADFASYSSVILHSIRSVLSSFSYNTLLSS 80
Query: 63 FAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFD 122
+A R ++ + G SPD FT+P VFKA G +++G+++HG V K G D
Sbjct: 81 YAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDD 140
Query: 123 TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQ 182
YV NS++ YGV G+ N K+F EMP +DVVSW I+G + +++A+D F +M
Sbjct: 141 IYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM-- 198
Query: 183 GCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPI-MGNALLDMYCKCGCLS 241
++ P+ T V L + + L LGK IH I + + GNAL+DMY KC LS
Sbjct: 199 --DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLS 256
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
+A +F G+LEK +D V W +MI+G V R
Sbjct: 257 DAMRVF---------------------GELEK----------KDKVSWNSMISGLVHCER 285
Query: 302 FDEAVALFREMQIIR-LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LF MQ +KPD IL ++L+ CA LGA++ G+W+H YI I D + T
Sbjct: 286 SKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGT 345
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
A+++MYAKCG IE ALEIF +R K+ +W +++ GLA++G ++L F +M+ G KP
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKP 405
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTM-TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
+ +TF+ L+AC H GLVDEGRR+F+ M + Y + PKLEHYGC+IDLL RAGLLDEA E
Sbjct: 406 NLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALE 465
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNV-DMGEKLAALLEKIESKDSSFHTLLANIYA 538
L++ +P + + V + GA+LSAC+ G + ++ +++ IE +DS + LL+NI+A
Sbjct: 466 LVKAMPVKPD---VRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFA 522
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIE 568
+ RW+DV +R+ MK G+ KVPG S IE
Sbjct: 523 ANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 319 PDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEI 378
P+K +L+ L++ C+ L +Q + I + + D ++ + + + I
Sbjct: 4 PEKSVLLELISRCSSLRVFKQIQ--TQLITRDLLRDDLIINKVVTFLGKSADFASYSSVI 61
Query: 379 FYELREK-DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+ +R + S+ +++ A+ K + + +S G PD TF V AC
Sbjct: 62 LHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSG 121
Query: 438 VDEGRRFFNTMTEV-----YQIQPKLEHY 461
+ EG++ +T++ +Q L H+
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHF 150
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 320/603 (53%), Gaps = 42/603 (6%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM---VFCTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+ LKQI + L + +N L+ +F + LL F Q P + YN
Sbjct: 26 VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLL-----FSHTQFPNIFLYN 80
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI F F ++L LF +R+ G+ FT+P V KA K G +H VVK
Sbjct: 81 SLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G D S++ +Y G++ + KLFDE+PD+ VV+W SG+ R +A+D+F
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKC 237
++M + + PD +V LSAC + +L+ G+ I +Y+ +E+E
Sbjct: 201 KKMVE-MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEM--------------- 243
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
KN T++V+ Y CG++EKAR +FD +DIV W+ MI GY
Sbjct: 244 --------------QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA 289
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
+ E + LF +M LKPD+F +V L+ CA LGAL+ G+W I+ + +
Sbjct: 290 SNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF 349
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+A ALI+MYAKCG + + E+F E++EKD + I GLA NG + + +F Q G
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
PD TF+G+L C H GL+ +G RFFN ++ VY ++ +EHYGC++DL GRAG+LD+A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 478 EELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIY 537
LI +P N I+ +GALLS CR+ + + E + L +E ++ + L+NIY
Sbjct: 470 YRLICDMPMRPNAIV---WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIY 526
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMA 597
+ RW++ VR M + G++K+PG S IE+ G +HEFL D SH +IY+ L+ +
Sbjct: 527 SVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLG 586
Query: 598 KTL 600
+
Sbjct: 587 NEM 589
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 344/591 (58%), Gaps = 41/591 (6%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
QLKQI A++ +GLQ + + KL+ + S G++ +A ++F + P + +N +I+
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQIFPWNAIIR 92
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+++ F+ +LL++S ++ VSPD+FT+P + KA L ++ G VH V + G +
Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFD--EMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D +V N ++ +Y ++ + + +F+ +P++ +VSW +S + + +A+++F +
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCG 238
MR+ ++ PD +VS L+A T L++L+ G+ IH + LE P + +L MY KC
Sbjct: 213 MRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC- 270
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
GQ+ A+ LFD+ +++LW AMI+GY +
Sbjct: 271 ------------------------------GQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
EA+ +F EM ++PD + + ++ CAQ+G+LEQ + ++ Y+ + D +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
++ALI+M+AKCG +E A +F ++D W+++I G ++G+ +A+ L+ M GG
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P+D+TF+G+L AC+H G+V EG FFN M + ++I P+ +HY C+IDLLGRAG LD+A
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYA 538
E+I+ +P + V ++GALLSAC+ + +V++GE A L I+ ++ + L+N+YA
Sbjct: 480 EVIKCMPVQPG---VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 539 SANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
+A W+ V VR +MKE G+ K GCS +E+ G + F VGD SH +EI
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 352/656 (53%), Gaps = 71/656 (10%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ ++ + GL + +N LM + G L+A K+F + ++N ++ A++K+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLM--NVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKR 93
Query: 67 GSFRKSLLLFSKLRER-------------------------------GVSPDNFTYPFVF 95
G + F +L +R G+ P FT V
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
+V ++ G+KVH ++VK GL + V NS+++MY G K +FD M +D+
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 156 SWNVSISGHVKC-------MRFED------------------------AVDVFRRMRQGC 184
SWN I+ H++ +FE A+D+F +M +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEA 243
L PD T+ S LSAC L+ L +GK+IH +I + + I+ NAL+ MY +CG + A
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 244 RELFDEMPNKN--VICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
R L ++ K+ + +T+++ GY+ G + +A+++F RD+V WTAMI GY Q
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATA 361
+ EA+ LFR M +P+ + L A+L+ + L +L GK IHG ++ V+ A
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA 453
Query: 362 LIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
LI MYAK G I A F +R E+D SWTS+I LA +G +ALELF M+ G +P
Sbjct: 454 LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D IT++GV SAC+H GLV++GR++F+ M +V +I P L HY C++DL GRAGLL EA+E
Sbjct: 514 DHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I K+P E + V +G+LLSACR++ N+D+G+ A L +E ++S ++ LAN+Y++
Sbjct: 574 IEKMPIEPD---VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 630
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
+WE+ +R+ MK+ V+K G S IE+ +H F V D +H E EIY + ++
Sbjct: 631 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/502 (37%), Positives = 316/502 (62%), Gaps = 12/502 (2%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
+H +++T + D +V ++ + L + +F + + +V + I G V R
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEF--TPIMG 227
D V ++ RM +++PD + S L AC +L++ +EIH + +L F + +G
Sbjct: 108 SADGVSLYHRMIHN-SVLPDNYVITSVLKAC----DLKVCREIHAQV-LKLGFGSSRSVG 161
Query: 228 NALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIV 287
++++Y K G L A+++FDEMP+++ + T M++ Y CG +++A +LF ++D V
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 288 LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYI 347
WTAMI+G V+ ++A+ LFREMQ+ + ++F V +L+ C+ LGALE G+W+H ++
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 348 NENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKAL 407
R+ + V ALI MY++CG I +A +F +R+KD S+ ++I GLAM+G +A+
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAI 341
Query: 408 ELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDL 467
F M++ G +P+ +T + +L+ACSHGGL+D G FN+M V+ ++P++EHYGC++DL
Sbjct: 342 NEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDL 401
Query: 468 LGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDS 527
LGR G L+EA I IP E + I++ G LLSAC+I+GN+++GEK+A L + E+ DS
Sbjct: 402 LGRVGRLEEAYRFIENIPIEPDHIML---GTLLSACKIHGNMELGEKIAKRLFESENPDS 458
Query: 528 SFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMK 587
+ LL+N+YAS+ +W++ T +R+ M++ G+ K PGCS+IE++ IHEFLVGD +H +
Sbjct: 459 GTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKE 518
Query: 588 EIYSMLDRMAKTLLDSKQNAME 609
IY L + + +L K+N ++
Sbjct: 519 AIYQRLQELNR-ILRFKENQID 539
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 207/456 (45%), Gaps = 83/456 (18%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ + I A+I + Q+ + +L+ C+ + ++ YA +F + +P + Y +I
Sbjct: 42 IAHVPSIHAKIIRTFHDQDAFVVFELIRVCS--TLDSVDYAYDVFSYVSNPNVYLYTAMI 99
Query: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
F G + L+ ++ V PDN+ V KA ++K ++H V+K G
Sbjct: 100 DGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFG 155
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPD----------------------------- 151
V +M++YG G++ N KK+FDEMPD
Sbjct: 156 SSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDV 215
Query: 152 --KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELG 209
KD V W I G V+ A+++FR M Q N+ +E T V LSAC+ L LELG
Sbjct: 216 KIKDTVCWTAMIDGLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALELG 274
Query: 210 KEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
+ +H ++ NQ +E + +GNAL++MY +CG ++EAR +F M +K+VI + +M+SG
Sbjct: 275 RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMH 334
Query: 269 GQLEKA----RDLFDRSPVRDIVLWTAMIN----------GYVQFN-------------- 300
G +A RD+ +R + V A++N G FN
Sbjct: 335 GASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEH 394
Query: 301 ------------RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
R +EA +R ++ I ++PD +L LL+ C G +E G+ I +
Sbjct: 395 YGCIVDLLGRVGRLEEA---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLF 451
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
E+ D+ L +YA G +++ EI +R+
Sbjct: 452 ESE-NPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/668 (32%), Positives = 348/668 (52%), Gaps = 79/668 (11%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ +L+QI +F+ GL Q KL+ +FC +G++ A ++F I S + Y+ +
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFC---RYGSVDEAARVFEPIDSKLNVLYHTM 106
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+K FAK K+L F ++R V P + + ++ K G E++ G+++HG +VK+G
Sbjct: 107 LKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
D + + +MY ++ +K+FD MP++D+VSWN ++G+ + A+++ +
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-------------------- 219
M + NL P T+VS L A +AL+ + +GKEIH Y +
Sbjct: 227 MCEE-NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 220 ------------LEFTPIMGNALLDMYCKCGCLSEARELFDEM------P---------- 251
LE + N+++D Y + EA +F +M P
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 252 -----------------------NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
++NV S++S Y C +++ A +F + R +V
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W AMI G+ Q R +A+ F +M+ +KPD F V+++T A+L KWIHG +
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ + + V TAL++MYAKCG I A IF + E+ +W ++I G +G ALE
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALE 525
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
LF +M G KP+ +TF+ V+SACSH GLV+ G + F M E Y I+ ++HYG ++DLL
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLL 585
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSS 528
GRAG L+EA + I ++P + V +YGA+L AC+I+ NV+ EK A L ++ D
Sbjct: 586 GRAGRLNEAWDFIMQMPVKP---AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 529 FHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKE 588
+H LLANIY +A+ WE V VR M G+RK PGCS +EI +H F G +H + K+
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 589 IYSMLDRM 596
IY+ L+++
Sbjct: 703 IYAFLEKL 710
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 324/595 (54%), Gaps = 48/595 (8%)
Query: 15 GLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGS-IQSPCLLAYNLLIKAFAKKGSFRKSL 73
++ N + K +V S + YA K+F Q N +IKA+ + + S
Sbjct: 5 AIETNVQIFTKFLVISA--SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSF 62
Query: 74 LLFSKLR-ERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDM 132
L+ LR E +PDNFT+ + K+ V +G ++H + + G D YV ++DM
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y GK+ + FDEMP + VSW ISG+++C + A +F + MP
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF-------DQMPHVKD 175
Query: 193 VVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
VV + NA++D + K G ++ AR LFDEM +
Sbjct: 176 VV-------------------------------IYNAMMDGFVKSGDMTSARRLFDEMTH 204
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
K VI WT+M+ GY N ++ AR LFD P R++V W MI GY Q + E + LF+EM
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 313 Q-IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
Q L PD ++++L + GAL G+W H ++ ++ V TA+++MY+KCG
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IEKA IF E+ EK ASW ++I G A+NG AL+LF M+ KPD+IT + V++A
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI-EEKPDEITMLAVITA 383
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
C+HGGLV+EGR++F+ M E+ + K+EHYGC++DLLGRAG L EAE+LI +P E N I
Sbjct: 384 CNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGI 442
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I+ + LSAC Y +++ E++ ++E ++ + LL N+YA+ RW+D V+
Sbjct: 443 IL---SSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKN 499
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQN 606
M++ +K GCS IEIN I+ EF+ GD +H + I+ +L + + + K N
Sbjct: 500 VMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKYN 554
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 347/612 (56%), Gaps = 21/612 (3%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQ-SPCLLAYNLLIK 61
Q KQ+ AQI + L + +++L+ F NL A+ +F + +P + YN +I
Sbjct: 49 QFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMIS 108
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG-LE 120
A + S + L+S + VSPD T+ ++ KA +L EVK+ +H +++ +G L
Sbjct: 109 AVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLS 163
Query: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
Y+ NS++ Y LG +K+F MP DV S+NV I G+ K +A+ ++ +M
Sbjct: 164 LGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM 223
Query: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE---LEFTPIMGNALLDMYCKC 237
+ PDE TV+S L C L ++ LGK +H +I + I+ NALLDMY KC
Sbjct: 224 VSD-GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKC 282
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
A+ FD M K++ W +MV G+V G +E A+ +FD+ P RD+V W +++ GY
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS 342
Query: 298 QFNRFDEAV-ALFREMQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVD 355
+ V LF EM I+ ++KPD+ +V+L++G A G L G+W+HG + ++ D
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 356 AVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS 415
A +++ALI+MY KCG+IE+A +F EKD A WTS+I GLA +G +AL+LF +M
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 416 GGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
G P+++T + VL+ACSH GLV+EG FN M + + P+ EHYG L+DLL RAG ++
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 476 EAEELI-RKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLA 534
EA++++ +K+P ++ ++G++LSACR +++ E L K+E + + LL+
Sbjct: 523 EAKDIVQKKMPMRPSQ---SMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLS 579
Query: 535 NIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGD----PSHSEMKEIY 590
NIYA+ RW R+ M+ GV+K G SS+ +H F+ + P +E+K I
Sbjct: 580 NIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRIL 639
Query: 591 SMLDRMAKTLLD 602
L K LD
Sbjct: 640 QHLYNEMKPKLD 651
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 313/523 (59%), Gaps = 34/523 (6%)
Query: 104 VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLG----KICNVKKLFDEMPDKDVVSWNV 159
++ ++H +K+G DT I+ + K+F++MP ++ SWN
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 160 SISGHVKCMRFED----AVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-- 213
I G + ED A+ +F M + P+ T S L AC ++ GK+IH
Sbjct: 96 IIRGFSESD--EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 153
Query: 214 --RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDE---------MPNKN-----VIC 257
+Y EF +M N L+ MY CG + +AR LF + M ++ ++
Sbjct: 154 ALKYGFGGDEF--VMSN-LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W M+ GY+ G + AR LFD+ R +V W MI+GY F +AV +FREM+ +
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 318 KPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALE 377
+P+ LV++L ++LG+LE G+W+H Y ++ I +D V+ +ALI+MY+KCG+IEKA+
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 378 IFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGL 437
+F L ++ +W+++I G A++G+ A++ F +M G +P D+ +I +L+ACSHGGL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 438 VDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYG 497
V+EGRR+F+ M V ++P++EHYGC++DLLGR+GLLDEAEE I +P + +++I +
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI---WK 447
Query: 498 ALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMG 557
ALL ACR+ GNV+MG+++A +L + DS + L+N+YAS W +V+ +R +MKE
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 558 VRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+RK PGCS I+I+G++HEF+V D SH + KEI SML ++ L
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 213/477 (44%), Gaps = 96/477 (20%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPS--HGNLLYAEKIFGSIQSPCLLAYNL 58
+ L QI A + G ++ +++ FC H +L YA KIF + ++N
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 59 LIKAFAKKGSFRKSL---LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+I+ F++ + + L + + + V P+ FT+P V KA G++++G+++HG +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 116 KTGLEFDTYVCNSIMDMYGV---------------------------------------- 135
K G D +V ++++ MY +
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 136 -----LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDE 190
LG + LFD+M + VVSWN ISG+ F+DAV+VFR M++G ++ P+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRPNY 274
Query: 191 GTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDE 249
T+VS L A + L +LELG+ +H Y + ++G+AL+DMY KCG + +A +F+
Sbjct: 275 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 334
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDR--------SPVRDIVLWTAMIN-GYVQFN 300
+P +NVI W++M++G+ GQ A D F + S V I L TA + G V+
Sbjct: 335 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 301 R-------------------------------FDEAVALFREMQIIRLKPDKFILVALLT 329
R DEA M I KPD I ALL
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI---KPDDVIWKALLG 451
Query: 330 GCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
C G +E GK + I + + D+ AL MYA G + E+ ++EKD
Sbjct: 452 ACRMQGNVEMGKRV-ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 144/295 (48%), Gaps = 15/295 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+ A +F ++ ++++N +I ++ G F+ ++ +F ++++ + P+ T V
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A+ LG ++ GE +H Y +G+ D + ++++DMY G I +F+ +P ++V+
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
+W+ I+G + DA+D F +MRQ + P + ++ L+AC+ +E G+ RY
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQA-GVRPSDVAYINLLTACSHGGLVEEGR---RY 397
Query: 216 INQELE---FTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCG 269
+Q + P + + ++D+ + G L EA E MP K + + W +++ G
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 270 QLEKARD----LFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPD 320
+E + L D P D + A+ N Y + E + M+ ++ D
Sbjct: 458 NVEMGKRVANILMDMVP-HDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/499 (39%), Positives = 295/499 (59%), Gaps = 12/499 (2%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICN----VKKLFDEMPDKDVVSWNVSISG 163
+++H ++KTGL D+Y + + + + + +FD D WN+ I G
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLS-FCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 164 HVKCMRFEDAVDVFRRMRQGCNLMPDEG-TVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
E ++ +++RM C+ P T S L AC+ L E +IH I + E
Sbjct: 90 FSCSDEPERSLLLYQRML--CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
N+L++ Y G A LFD +P + + W S++ GYV G+++ A LF +
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
++ + WT MI+GYVQ + EA+ LF EMQ ++PD L L+ CAQLGALEQGK
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
WIH Y+N+ RI +D+V+ LI+MYAKCG +E+ALE+F +++K +WT++I G A +G
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+A+ F +M G KP+ ITF VL+ACS+ GLV+EG+ F +M Y ++P +EHY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++DLLGRAGLLDEA+ I+++P + N +I +GALL ACRI+ N+++GE++ +L
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI---WGALLKACRIHKNIELGEEIGEILIA 444
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
I+ + ANI+A +W+ R+ MKE GV KVPGCS+I + G HEFL GD
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 504
Query: 582 SHSEMKEIYSMLDRMAKTL 600
SH E+++I S M + L
Sbjct: 505 SHPEIEKIQSKWRIMRRKL 523
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 207/442 (46%), Gaps = 71/442 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLL-YAEKIFGSIQSPCLLAYNLLIK 61
+LKQI A++ + GL Q+ + K + FC + + L YA+ +F P +NL+I+
Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
F+ +SLLL+ ++ + +T+P + KA L ++ ++H + K G E
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D Y NS+++ Y V G LFD +P+ D VSWN I G+VK + + A+ +FR+M
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 182 ------------------------------QGCNLMPDEGTVVSTLSACTALKNLELGKE 211
Q ++ PD ++ + LSAC L LE GK
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 212 IHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
IH Y+N+ + ++G L+DMY KCG + EA E+F + K+V WT+++SGY G
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
EA++ F EMQ + +KP+ A+LT
Sbjct: 329 GR-------------------------------EAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVAT--ALIEMYAKCGLIEKALEIFYELREK-DA 387
C+ G +E+GK I Y E + + ++++ + GL+++A E+ K +A
Sbjct: 358 CSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNA 416
Query: 388 ASWTSIICGLAMNGKINKALEL 409
W +++ +I+K +EL
Sbjct: 417 VIWGALLKAC----RIHKNIEL 434
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/459 (38%), Positives = 284/459 (61%), Gaps = 5/459 (1%)
Query: 144 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR-MRQGCNLMPDEGTVVSTLSACTA 202
++ D + + N I H K E + D +RR + G +L PD TV + ACT
Sbjct: 61 QILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTG 120
Query: 203 LKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
L+ E G ++H I + + P + L+ +Y + GCL ++F+ +P + +C T+M
Sbjct: 121 LRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAM 180
Query: 262 VSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
V+ CG + AR LF+ P RD + W AMI+GY Q EA+ +F MQ+ +K +
Sbjct: 181 VTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
Query: 322 FILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYE 381
++++L+ C QLGAL+QG+W H YI N+I + +AT L+++YAKCG +EKA+E+F+
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300
Query: 382 LREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEG 441
+ EK+ +W+S + GLAMNG K LELFS M G P+ +TF+ VL CS G VDEG
Sbjct: 301 MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 442 RRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLS 501
+R F++M + I+P+LEHYGCL+DL RAG L++A +I+++P + + + + +LL
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAV---WSSLLH 417
Query: 502 ACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
A R+Y N+++G + + ++E+ + + LL+NIYA +N W++V++VRQ MK GVRK
Sbjct: 418 ASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PGCS +E+NG +HEF VGD SH + +I ++ +++ L
Sbjct: 478 PGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRL 516
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 200/429 (46%), Gaps = 70/429 (16%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+++QI A+++ G ++ + + H L YA +I + P L A N +I+A
Sbjct: 21 EVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRA 80
Query: 63 FAKKGSFRKSLLLFSKLRERG--VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
K KS + ++ G + PDN+T F+ +A L + G +VHG ++ G +
Sbjct: 81 HCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFD 140
Query: 121 FDTYVCNSIMDMYGVLG------KICN-------------------------VKKLFDEM 149
D +V ++ +Y LG K+ N +KLF+ M
Sbjct: 141 NDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGM 200
Query: 150 PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLEL 208
P++D ++WN ISG+ + +A++VF M+ +G + + ++S LSACT L L+
Sbjct: 201 PERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV--NGVAMISVLSACTQLGALDQ 258
Query: 209 GKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN 267
G+ H YI + +++ T + L+D+Y KCG + +A E+F M KNV W+S ++G
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA- 317
Query: 268 CGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVAL 327
+NG+ + + + LF M+ + P+ V++
Sbjct: 318 -------------------------MNGFGE-----KCLELFSLMKQDGVTPNAVTFVSV 347
Query: 328 LTGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK- 385
L GC+ +G +++G + NE I L+++YA+ G +E A+ I ++ K
Sbjct: 348 LRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKP 407
Query: 386 DAASWTSII 394
AA W+S++
Sbjct: 408 HAAVWSSLL 416
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 195/536 (36%), Positives = 298/536 (55%), Gaps = 42/536 (7%)
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+++ VH ++ L ++ + +M Y L + + +K+FDE+P+++V+ NV I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
+V + + V VF M GCN+ PD T L AC+ + +G++IH + L
Sbjct: 114 SYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVN----------CGQL 271
T +GN L+ MY KCG LSEAR + DEM ++V+ W S+V GY C ++
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 272 EKAR---------------------------DLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
E + D+F + + +V W MI Y++ E
Sbjct: 233 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
AV L+ M+ +PD + ++L C AL GK IHGYI ++ + ++ ALI+
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MYAKCG +EKA ++F ++ +D SWT++I +G+ A+ LFS++ G PD I
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
F+ L+ACSH GL++EGR F MT+ Y+I P+LEH C++DLLGRAG + EA I+ +
Sbjct: 413 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWE 544
E NE + +GALL ACR++ + D+G A L ++ + S ++ LL+NIYA A RWE
Sbjct: 473 SMEPNERV---WGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWE 529
Query: 545 DVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
+VTN+R MK G++K PG S++E+N IIH FLVGD SH + EIY LD + K +
Sbjct: 530 EVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 230/513 (44%), Gaps = 70/513 (13%)
Query: 4 LKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
L+ + ++I L+ N KLM + S ++ A K+F I ++ N++I+++
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMR--AYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
G + + + +F + V PD++T+P V KA G + G K+HG K GL
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
+V N ++ MYG G + + + DEM +DVVSWN + G+ + RF+DA++V R M +
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ES 234
Query: 184 CNLMPDEGTVVSTLSAC--TALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+ D GT+ S L A T +N+ K++ + ++ + + N ++ +Y K
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK---SLVSWNVMIGVYMKNAMPV 291
Query: 242 EARELFDEM------PN---------------------------------KNVICWTSMV 262
EA EL+ M P+ N++ +++
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
Y CG LEKARD+F+ RD+V WTAMI+ Y R +AVALF ++Q L PD
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINEN-RITVDAVVATALIEMYAKCGLIEKALEIFYE 381
V L C+ G LE+G+ + ++ +IT ++++ + G +++A +
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 382 LR-EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDE 440
+ E + W +++ G + T IG+L+A L E
Sbjct: 472 MSMEPNERVWGALL---------------------GACRVHSDTDIGLLAADKLFQLAPE 510
Query: 441 GRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
++ ++ +Y + E + +++ GL
Sbjct: 511 QSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 361 bits (927), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 198/502 (39%), Positives = 298/502 (59%), Gaps = 22/502 (4%)
Query: 104 VKKGEKVHGYVVKTGLEFDT--------YVCNSIMDM-YGVLGKICNVKKLFDEMPDKDV 154
+++ +++H ++KTGL DT + C S DM Y L +F + K+
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYL--------VFTRINHKNP 89
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
WN I G + E A+ +F M ++ P T S A L G+++H
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 214 RYINQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
+ +E LE + N +L MY CGCL EA +F M +V+ W SM+ G+ CG ++
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCA 332
+A++LFD P R+ V W +MI+G+V+ RF +A+ +FREMQ +KPD F +V+LL CA
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA 269
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
LGA EQG+WIH YI NR ++++V TALI+MY KCG IE+ L +F +K + W S
Sbjct: 270 YLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNS 329
Query: 393 IICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVY 452
+I GLA NG +A++LFS++ G +PD ++FIGVL+AC+H G V FF M E Y
Sbjct: 330 MILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKY 389
Query: 453 QIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMG 512
I+P ++HY ++++LG AGLL+EAE LI+ +P E + +I + +LLSACR GNV+M
Sbjct: 390 MIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVI---WSSLLSACRKIGNVEMA 446
Query: 513 EKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGI 572
++ A L+K++ ++ + LL+N YAS +E+ R MKE + K GCSSIE++
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 573 IHEFLVGDPSHSEMKEIYSMLD 594
+HEF+ +H + EIYS+LD
Sbjct: 507 VHEFISCGGTHPKSAEIYSLLD 528
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 210/443 (47%), Gaps = 71/443 (16%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFC-THPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
M +LKQI A + + GL + T ++++ FC PS N YA +F I +N +
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN--YAYLVFTRINHKNPFVWNTI 95
Query: 60 IKAFAKKGSFRKSLLLFSKL--RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
I+ F++ ++ +F + V P TYP VFKA G LG+ + G ++HG V+K
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 118 GLEFDTYVCNSIMDMY---GVL----------------------------GKICNVKKLF 146
GLE D+++ N+++ MY G L G I + LF
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
DEMP ++ VSWN ISG V+ RF+DA+D+FR M++ ++ PD T+VS L+AC L
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK-DVKPDGFTMVSLLNACAYLGAS 274
Query: 207 ELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
E G+ IH YI E I+ AL+DMYCKCGC+ E +F+ P K + CW SM+ G
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
N G E+A DLF E++ L+PD +
Sbjct: 335 ANNGFEERAMDLFS-------------------------------ELERSGLEPDSVSFI 363
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVA-TALIEMYAKCGLIEKALEIFYELR- 383
+LT CA G + + + E + ++ T ++ + GL+E+A + +
Sbjct: 364 GVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPV 423
Query: 384 EKDAASWTSIICGLAMNGKINKA 406
E+D W+S++ G + A
Sbjct: 424 EEDTVIWSSLLSACRKIGNVEMA 446
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/517 (36%), Positives = 310/517 (59%), Gaps = 12/517 (2%)
Query: 74 LLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMY 133
+ F +RE +N+ PF+ + + + +K++ ++ GL +++ ++D
Sbjct: 1 MAFHGIRE----VENYFIPFLQR----VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC 52
Query: 134 GVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 193
+ + +LF+++ + +V +N I + + D + +++++ + +PD T
Sbjct: 53 DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTF 112
Query: 194 VSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPN 252
+C +L + LGK++H ++ + F + NAL+DMY K L +A ++FDEM
Sbjct: 113 PFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE 172
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
++VI W S++SGY GQ++KA+ LF + IV WTAMI+GY + EA+ FREM
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 313 QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLI 372
Q+ ++PD+ L+++L CAQLG+LE GKWIH Y V ALIEMY+KCG+I
Sbjct: 233 QLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 373 EKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSAC 432
+A+++F ++ KD SW+++I G A +G + A+E F++M KP+ ITF+G+LSAC
Sbjct: 293 SQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC 352
Query: 433 SHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEII 492
SH G+ EG R+F+ M + YQI+PK+EHYGCLID+L RAG L+ A E+ + +P + + I
Sbjct: 353 SHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKI 412
Query: 493 VPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQK 552
+G+LLS+CR GN+D+ L ++E +D + LLANIYA +WEDV+ +R+
Sbjct: 413 ---WGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKM 469
Query: 553 MKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEI 589
++ ++K PG S IE+N I+ EF+ GD S EI
Sbjct: 470 IRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 222/457 (48%), Gaps = 73/457 (15%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
+ K+I A I GL Q+ + K++ FC ++ YA ++F + +P + YN +I+A
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQVSNPNVFLYNSIIRA 82
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + + ++ +L + PD FT+PF+FK+ LG G++VHG++ K G F
Sbjct: 83 YTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRF 142
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR------------ 169
N+++DMY + + K+FDEM ++DV+SWN +SG+ + +
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 170 -------------------FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
+ +A+D FR M Q + PDE +++S L +C L +LELGK
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREM-QLAGIEPDEISLISVLPSCAQLGSLELGK 261
Query: 211 EIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNC 268
IH Y + L+ T + NAL++MY KCG +S+A +LF +M K+VI W++M+SGY
Sbjct: 262 WIHLYAERRGFLKQTGVC-NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYH 320
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALL 328
G A+ F EMQ ++KP+ + LL
Sbjct: 321 GNAHG-------------------------------AIETFNEMQRAKVKPNGITFLGLL 349
Query: 329 TGCAQLGALEQG-KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK-D 386
+ C+ +G ++G ++ + +I LI++ A+ G +E+A+EI + K D
Sbjct: 350 SACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPD 409
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+ W S++ G ++ AL ++ +P+D+
Sbjct: 410 SKIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPEDM 444
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 359 bits (922), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 188/497 (37%), Positives = 303/497 (60%), Gaps = 6/497 (1%)
Query: 107 GEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVK 166
+ +H ++VK G+ + N+++++YG G + ++FDEMP +D ++W ++ +
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 167 CMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPI 225
+ VF + L PD+ + + AC L +++ G+++H +I E +
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV 141
Query: 226 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRD 285
+ ++L+DMY KCG L+ A+ +FD + KN I WT+MVSGY G+ E+A +LF PV++
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKN 201
Query: 286 IVLWTAMINGYVQFNRFDEAVALFREMQIIRLKP-DKFILVALLTGCAQLGALEQGKWIH 344
+ WTA+I+G+VQ + EA ++F EM+ R+ D +L +++ CA L A G+ +H
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH 261
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
G + ++ ALI+MYAKC + A +IF +R +D SWTS+I G+A +G+
Sbjct: 262 GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAE 321
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
KAL L+ M+S G KP+++TF+G++ ACSH G V++GR F +MT+ Y I+P L+HY CL
Sbjct: 322 KALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCL 381
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLA-ALLEKIE 523
+DLLGR+GLLDEAE LI +P +E P + ALLSAC+ G MG ++A L+ +
Sbjct: 382 LDLLGRSGLLDEAENLIHTMPFPPDE---PTWAALLSACKRQGRGQMGIRIADHLVSSFK 438
Query: 524 SKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSH 583
KD S + LL+NIYASA+ W V+ R+K+ EM VRK PG SS+E+ F G+ SH
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSH 498
Query: 584 SEMKEIYSMLDRMAKTL 600
++I+ +L ++ + +
Sbjct: 499 PLKEDIFRLLKKLEEEM 515
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 214/489 (43%), Gaps = 77/489 (15%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VF--CTHPSHGNLLYAEKIFGSIQSPCLLAYN 57
+T K + A I ++G+ Q N L+ V+ C SH A ++F + +A+
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASH-----ALQVFDEMPHRDHIAWA 73
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERG-VSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
++ A + K+L +FS + + PD+F + + KA LG + G +VH + +
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
+ D V +S++DMY G + + K +FD + K+ +SW +SG+ K R E+A+++
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 177 FR-------------------------------RMRQGCNLMPDEGTVVSTLSACTALKN 205
FR MR+ + D + S + AC L
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 206 LELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
G+++H I + + NAL+DMY KC + A+++F M +++V+ WTS++ G
Sbjct: 254 SIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
GQ EK A+AL+ +M +KP++
Sbjct: 314 MAQHGQAEK-------------------------------ALALYDDMVSHGVKPNEVTF 342
Query: 325 VALLTGCAQLGALEQGKWIHGYINENR-ITVDAVVATALIEMYAKCGLIEKALEIFYELR 383
V L+ C+ +G +E+G+ + + ++ I T L+++ + GL+++A + + +
Sbjct: 343 VGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
Query: 384 -EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFI---GVLSACSHGGLVD 439
D +W +++ G+ + + ++S D T+I + ++ S G V
Sbjct: 403 FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVS 462
Query: 440 EGRRFFNTM 448
E RR M
Sbjct: 463 EARRKLGEM 471
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA+ L K +H +I + I +A L+ +Y KCG AL++F E+ +D +W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 391 TSIICGLAMNGKINKALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFF-NTM 448
S++ L K L +FS + S +PDD F ++ AC++ G +D GR+ + +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 449 TEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
Y ++ L+D+ + GLL+ A+ + I +N
Sbjct: 133 VSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 358 bits (920), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/582 (35%), Positives = 321/582 (55%), Gaps = 47/582 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
+ QL+QIQAQ+ +++ + K + G+ Y+ +F + P ++N +I
Sbjct: 50 VNQLRQIQAQMLLHSVEKPNFLIPKAVEL------GDFNYSSFLFSVTEEPNHYSFNYMI 103
Query: 61 KAFAKK-GSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ +L L+ +++ G+ PD FTY FVF A L E+ G VH + K GL
Sbjct: 104 RGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGL 163
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
E D ++ +S++ MY G++ +KLFDE+ ++D VSWN ISG+ + +DA+D+FR+
Sbjct: 164 ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRK 223
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCG 238
M + PDE T+VS L AC+ L +L G+ + I +++ + +G+ L+ MY KC
Sbjct: 224 MEEE-GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKC- 281
Query: 239 CLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQ 298
G L+ AR +F++ +D V WTAMI Y Q
Sbjct: 282 ------------------------------GDLDSARRVFNQMIKKDRVAWTAMITVYSQ 311
Query: 299 FNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVV 358
+ EA LF EM+ + PD L +L+ C +GALE GK I + +E + + V
Sbjct: 312 NGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYV 371
Query: 359 ATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGA 418
AT L++MY KCG +E+AL +F + K+ A+W ++I A G +AL LF +M
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SV 428
Query: 419 KPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAE 478
P DITFIGVLSAC H GLV +G R+F+ M+ ++ + PK+EHY +IDLL RAG+LDEA
Sbjct: 429 PPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAW 488
Query: 479 ELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEK-LAALLEKIESKDSSFHTLLANIY 537
E + + P + +EI++ A+L AC +V + EK + L+E E+K++ + + +N+
Sbjct: 489 EFMERFPGKPDEIML---AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVL 545
Query: 538 ASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG 579
A W++ +R M++ GV K PGCS IEI G + EFL G
Sbjct: 546 ADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/629 (32%), Positives = 339/629 (53%), Gaps = 75/629 (11%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIK 61
+Q KQ+ AQ + Q+ + +V + + L A +F +++SP +LA+ +I+
Sbjct: 22 SQAKQLHAQFIR---TQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 78
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
F + F K+L F ++R G PD+ +P V K+ + +++ GE VHG++V+ G++
Sbjct: 79 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 122 DTYVCNSIMDMYGVL-----------------------------GKIC-------NVKKL 145
D Y N++M+MY L + C +V+++
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKN 205
F+ MP KDVVS+N I+G+ + +EDA+ + R M +L PD T+ S L + +
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT-TDLKPDSFTLSSVLPIFSEYVD 257
Query: 206 LELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 264
+ GKEIH Y I + ++ +G++L+DMY K
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA-------------------------- 291
Query: 265 YVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFIL 324
++E + +F R RD + W +++ GYVQ R++EA+ LFR+M ++KP
Sbjct: 292 -----RIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAF 346
Query: 325 VALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELRE 384
+++ CA L L GK +HGY+ + +A+AL++MY+KCG I+ A +IF +
Sbjct: 347 SSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Query: 385 KDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRF 444
D SWT+II G A++G ++A+ LF +M G KP+ + F+ VL+ACSH GLVDE +
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 445 FNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACR 504
FN+MT+VY + +LEHY + DLLGRAG L+EA I K+ E ++ LLS+C
Sbjct: 467 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG---SVWSTLLSSCS 523
Query: 505 IYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGC 564
++ N+++ EK+A + ++S++ + L+ N+YAS RW+++ +R +M++ G+RK P C
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583
Query: 565 SSIEINGIIHEFLVGDPSHSEMKEIYSML 593
S IE+ H F+ GD SH M +I L
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 212/659 (32%), Positives = 355/659 (53%), Gaps = 57/659 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLA----YNL 58
Q +Q+ AQ+ +L ++ + G LL A +F ++ S LL+ +N
Sbjct: 71 QCRQVHAQVLLSDFIFRSGSLAANLI-SVYARLGLLLDARNVFETV-SLVLLSDLRLWNS 128
Query: 59 LIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
++KA G + +L L+ +R+RG++ D + P + +A +LG H V++ G
Sbjct: 129 ILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG 188
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISG--------------- 163
L+ + +V N ++ +Y G++ + LF EMP ++ +SWNV I G
Sbjct: 189 LKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFE 248
Query: 164 --------------------HVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 203
H +C +FED + F MR N + E V S C L
Sbjct: 249 WMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV-FFSVCAEL 307
Query: 204 KNLELGKEIHRYINQE--LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSM 261
+ L + +++H Y+ + E+ P NAL+ +Y K G + +A LF ++ NK + W S+
Sbjct: 308 EALSIAEKVHGYVIKGGFEEYLPSR-NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSL 366
Query: 262 VSGYVNCGQLEKARDLFDR--------SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 313
++ +V+ G+L++A LF + ++V WT++I G R D+++ FR+MQ
Sbjct: 367 ITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Query: 314 IIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIE 373
++ + + +L+ CA+L AL G+ IHG++ ++ + +V AL+ MYAKCGL+
Sbjct: 427 FSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLS 486
Query: 374 KALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACS 433
+ +F +R+KD SW SII G M+G KAL +F +MIS G PD I + VLSACS
Sbjct: 487 EGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACS 546
Query: 434 HGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIV 493
H GLV++GR F +M++ + ++P+ EHY C++DLLGR G L EA E+++ +P E V
Sbjct: 547 HAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPK---V 603
Query: 494 PLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKM 553
+ GALL++CR++ NVD+ E +A+ L +E + + + LL+NIY++ RWE+ NVR
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALA 663
Query: 554 KEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAMEGDN 612
K+ ++KV G S IE+ ++F G SE + IY +L+ + +L K +G+N
Sbjct: 664 KKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLK-KGPTHDGNN 721
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/458 (38%), Positives = 285/458 (62%), Gaps = 15/458 (3%)
Query: 157 WNV---SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH 213
WN+ +I +V + + V+ RMR + PD T L + +L LG+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNH-RVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 214 RYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLE 272
I L+ P + +LL+MY CG L A+ +FD+ +K++ W S+V+ Y G ++
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 273 KARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-----LKPDKFILVAL 327
AR LFD P R+++ W+ +INGYV ++ EA+ LFREMQ+ + ++P++F + +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL-REKD 386
L+ C +LGALEQGKW+H YI++ + +D V+ TALI+MYAKCG +E+A +F L +KD
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 387 AASWTSIICGLAMNGKINKALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+++++IC LAM G ++ +LFS+M S P+ +TF+G+L AC H GL++EG+ +F
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
M E + I P ++HYGC++DL GR+GL+ EAE I +P E + +I +G+LLS R+
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI---WGSLLSGSRM 382
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
G++ E L +++ +S + LL+N+YA RW +V +R +M+ G+ KVPGCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
+E+ G++HEF+VGD S E + IY+MLD + + L ++
Sbjct: 443 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREA 480
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 180/390 (46%), Gaps = 72/390 (18%)
Query: 56 YNLLIKAFAKKGSF---RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+N++I+A S + ++ ++R VSPD T+PF+ + + G++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGK-------------------------------ICN 141
++ GL+ D +V S+++MY G I +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 142 VKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR----QGCNLMPDEGTVVSTL 197
+KLFDEMP+++V+SW+ I+G+V C ++++A+D+FR M+ + P+E T+ + L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 198 SACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVI 256
SAC L LE GK +H YI++ +E ++G AL+DMY KCG L A+ +F+ + +K
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK--- 263
Query: 257 CWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII- 315
+D+ ++AMI + DE LF EM
Sbjct: 264 ---------------------------KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 316 RLKPDKFILVALLTGCAQLGALEQGK-WIHGYINENRITVDAVVATALIEMYAKCGLIEK 374
+ P+ V +L C G + +GK + I E IT ++++Y + GLI++
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 375 ALEIFYEL-REKDAASWTSIICGLAMNGKI 403
A + E D W S++ G M G I
Sbjct: 357 AESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 182/429 (42%), Gaps = 60/429 (13%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
++ AQI GL ++P L+ + S G+L A+++F S L A+N ++ A+A
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNM--YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 65 KKGSFRKSLLLFSKLRERG------------------------------------VSPDN 88
K G + LF ++ ER V P+
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 89 FTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
FT V A G LG +++G+ VH Y+ K +E D + +++DMY G + K++F+
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 149 M-PDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLE 207
+ KDV +++ I ++ +F M N+ P+ T V L AC +
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 208 LGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSG 264
GK + + +E TP + + ++D+Y + G + EA MP +V+ W S++SG
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 265 YVNCGQLEKARDLFDRSPVRDIV---LWTAMINGYVQFNRFDEAVALFREMQIIRLKPDK 321
G ++ R D + + + N Y + R+ E + EM++ +
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK-- 437
Query: 322 FILVALLTGCAQLGALEQGKWIHGYI--NENRITVDAVVAT--ALIEMYAKCGLIEKALE 377
+ GC+ +E +H ++ +E++ + + A +++ + G + E
Sbjct: 438 ------VPGCSY---VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKE 488
Query: 378 IFYELREKD 386
+ +L EKD
Sbjct: 489 VLLDLNEKD 497
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 339/643 (52%), Gaps = 84/643 (13%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G+L A ++F ++ L +N+L+ AK G F S+ LF K+ GV D++T+ V
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
K+ L V GE++HG+++K+G V NS++ Y ++ + +K+FDEM ++DV+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I+G+V E + VF +M + D T+VS + C + + LG+ +H
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 216 -----INQELEFTPIMGNALLDMYCKCGCLS----------------------------- 241
++E F N LLDMY KCG L
Sbjct: 322 GVKACFSREDRFC----NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 242 --EARELFDEM------PN--------------------KNVICW-------------TS 260
EA +LF+EM P+ K V W +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 261 MVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM-QIIRLKP 319
++ Y CG +++A +F V+DI+ W +I GY + +EA++LF + + R P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 320 DKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIF 379
D+ + +L CA L A ++G+ IHGYI N D VA +L++MYAKCG + A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 380 YELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVD 439
++ KD SWT +I G M+G +A+ LF+QM G + D+I+F+ +L ACSH GLVD
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 440 EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGAL 499
EG RFFN M +I+P +EHY C++D+L R G L +A I +P + I +GAL
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI---WGAL 674
Query: 500 LSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVR 559
L CRI+ +V + EK+A + ++E +++ ++ L+ANIYA A +WE V +R+++ + G+R
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 560 KVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLD 602
K PGCS IEI G ++ F+ GD S+ E + I + L ++ +++
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 777
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/555 (23%), Positives = 244/555 (43%), Gaps = 90/555 (16%)
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
N ++ F + G+ ++ L + + P T V + +K G++V ++
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 117 TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDV 176
G D+ + + + MY G + ++FDE+ + + WN+ ++ K F ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 177 FRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYC 235
F++M + D T + ++L+++ G+++H +I +GN+L+ Y
Sbjct: 183 FKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 236 KCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV------------ 283
K + AR++FDEM ++VI W S+++GYV+ G EK +F + V
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 284 ---------------------------RDIVLWTAMINGYVQFNRFDEAVALFREM---- 312
R+ +++ Y + D A A+FREM
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 313 ------------------QIIRL---------KPDKFILVALLTGCAQLGALEQGKWIHG 345
+ ++L PD + + A+L CA+ L++GK +H
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 346 YINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINK 405
+I EN + D V+ AL++MYAKCG +++A +F E+R KD SW +II G + N N+
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 406 ALELFSQMISGGA-KPDDITFIGVLSACSHGGLVDEGRRFFN-TMTEVYQIQPKLEHYGC 463
AL LF+ ++ PD+ T VL AC+ D+GR M Y + +
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--S 539
Query: 464 LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK-- 521
L+D+ + G L A L I +++ + + +++ YG G++ AL +
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKD----LVSWTVMIAG---YGMHGFGKEAIALFNQMR 592
Query: 522 ---IESKDSSFHTLL 533
IE+ + SF +LL
Sbjct: 593 QAGIEADEISFVSLL 607
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 167/400 (41%), Gaps = 67/400 (16%)
Query: 189 DEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFD 248
D T+ S L C K+L+ GKE+ +I GN +
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIR---------GNGFV----------------- 126
Query: 249 EMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVAL 308
+ N+ S++ Y NCG L++A +FD + + W ++N + F ++ L
Sbjct: 127 --IDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 309 FREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAK 368
F++M ++ D + + + L ++ G+ +HG+I ++ V +L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 369 CGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGV 428
++ A ++F E+ E+D SW SII G NG K L +F QM+ G + D T + V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 429 LSACSHGGLVDEGR---------------RFFNTMTEVYQIQPKLE-------------- 459
+ C+ L+ GR RF NT+ ++Y L+
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 362
Query: 460 -HYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
Y +I R GL EA +L ++ E V A+L+ C Y +D G+++
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH-- 420
Query: 519 LEKIESKDSSFHTLLAN----IYASANRWEDVTNVRQKMK 554
E I+ D F ++N +YA ++ V +M+
Sbjct: 421 -EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 312/537 (58%), Gaps = 15/537 (2%)
Query: 45 FGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEV 104
FG ++ P L +N +IK+ + R++LLL + E GVS D F+ V KA LG V
Sbjct: 80 FGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 105 KKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGH 164
K G ++HG++ KTGL D ++ N ++ +Y G + +++FD MP +D VS+N I G+
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDE-GTVVSTLSACTALKNLELGKEIHRYINQEL-EF 222
VKC A ++F +LMP E ++S S + G +I + ++ E
Sbjct: 198 VKCGLIVSARELF-------DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 250
Query: 223 TPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSP 282
I N+++D Y K G + +A+ LFD MP ++V+ W +M+ GY G + A+ LFD+ P
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 283 VRDIVLWTAMINGYVQFNRFDEAVALFREMQI-IRLKPDKFILVALLTGCAQLGALEQGK 341
RD+V + +M+ GYVQ EA+ +F +M+ L PD LV +L AQLG L +
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+H YI E + + + ALI+MY+KCG I+ A+ +F + K W ++I GLA++G
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
A ++ Q+ KPDDITF+GVL+ACSH GLV EG F M ++I+P+L+HY
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 490
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++D+L R+G ++ A+ LI ++P E N++I + L+AC + + GE +A L
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPVEPNDVI---WRTFLTACSHHKEFETGELVAKHLIL 547
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLV 578
+ S + LL+N+YAS W+DV VR MKE + K+PGCS IE++G +HEF V
Sbjct: 548 QAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFV 94
G + +A+ +F + ++AYN ++ + + ++L +FS + +E + PD+ T V
Sbjct: 297 GFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 356
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
A+ LG + K +H Y+V+ + +++DMY G I + +F+ + +K +
Sbjct: 357 LPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 416
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
WN I G E A D+ ++ + +L PD+ T V L+AC+ ++ G
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIER-LSLKPDDITFVGVLNACSHSGLVKEGLLCFE 475
Query: 215 YINQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMP-NKNVICWTSMVSGYVNCGQL 271
+ ++ + P + + ++D+ + G + A+ L +EMP N + W + ++ + +
Sbjct: 476 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEF 535
Query: 272 E 272
E
Sbjct: 536 E 536
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 278 FDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGAL 337
F V D LW A+I + +A+ L M + DKF L +L C++LG +
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 338 EQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGL 397
+ G IHG++ + + D + LI +Y KCG + + ++F + ++D+ S+ S+I G
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 398 AMNGKINKALELF-------------SQMISGGAKPDD-----------------ITFIG 427
G I A ELF + MISG A+ D I++
Sbjct: 198 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNS 257
Query: 428 VLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNE 487
++ G +++ + F+ M + + + +ID + G + A+ L ++P+
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMP-----RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 312
Query: 488 N 488
+
Sbjct: 313 D 313
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 48/227 (21%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ +A +F I++ + +N +I A G + + ++ + PD+ T+ V
Sbjct: 399 GSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVL 458
Query: 96 KAVGWLGEVKKG-------EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDE 148
A G VK+G + H K Y C ++D+ G I K L +E
Sbjct: 459 NACSHSGLVKEGLLCFELMRRKH----KIEPRLQHYGC--MVDILSRSGSIELAKNLIEE 512
Query: 149 MPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLEL 208
MP + P++ + L+AC+ K E
Sbjct: 513 MP-----------------------------------VEPNDVIWRTFLTACSHHKEFET 537
Query: 209 GKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 255
G+ + +++ + + P L +MY G + R + M + +
Sbjct: 538 GELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKI 584
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 199/599 (33%), Positives = 329/599 (54%), Gaps = 44/599 (7%)
Query: 3 QLKQIQAQIFQ--IGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
LKQI + I + L++L+ C + YA ++ +Q+ + ++ LI
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAA-TQFRYARRLLCQLQTLSIQLWDSLI 74
Query: 61 KAFAKKGSF--RKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
F+ + R S L + +R GV P T+P + KAV L + + H ++VK G
Sbjct: 75 GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFG 133
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
L+ D +V NS++ Y G +LFD DKDVV+W I G V+ +A+ F
Sbjct: 134 LDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFV 193
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQ-ELEFTPIMGNALLDMYCK 236
M++ + +E TVVS L A ++++ G+ +H Y+ ++ +G++L+DMY K
Sbjct: 194 EMKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
C C + A+ +FD P R++V WTA+I GY
Sbjct: 253 CSCYDD-------------------------------AQKVFDEMPSRNVVTWTALIAGY 281
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
VQ FD+ + +F EM + P++ L ++L+ CA +GAL +G+ +H Y+ +N I ++
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
T LI++Y KCG +E+A+ +F L EK+ +WT++I G A +G A +LF M+S
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS 401
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDE 476
P+++TF+ VLSAC+HGGLV+EGRR F +M + ++PK +HY C++DL GR GLL+E
Sbjct: 402 HVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEE 461
Query: 477 AEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANI 536
A+ LI ++P E ++ +GAL +C ++ + ++G+ A+ + K++ S +TLLAN+
Sbjct: 462 AKALIERMPMEPTNVV---WGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANL 518
Query: 537 YASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS-EMKEIYSMLD 594
Y+ + W++V VR++MK+ V K PG S IE+ G + EF+ D E ++Y LD
Sbjct: 519 YSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLD 577
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 343/638 (53%), Gaps = 46/638 (7%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q A+I + G Q + KL+ ++ ++ A+ + SI P + +++ LI A K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIA--SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
F +S+ +FS++ G+ PD+ P +FK L K G+++H +GL+ D +V
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVV------------------------------ 155
S+ MY G++ + +K+FD M DKDVV
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 156 -----SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
SWN +SG + ++AV +F+++ PD+ TV S L + + L +G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHH-LGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 211 EIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
IH Y I Q L + +A++DMY K G + LF++ + ++G G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 270 QLEKARDLFD----RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
++KA ++F+ ++ ++V WT++I G Q + EA+ LFREMQ+ +KP+ +
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L C + AL G+ HG+ + + V +ALI+MYAKCG I + +F + K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ W S++ G +M+GK + + +F ++ KPD I+F +LSAC GL DEG ++F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 446 NTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRI 505
M+E Y I+P+LEHY C+++LLGRAG L EA +LI+++P E + + +GALL++CR+
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV---WGALLNSCRL 569
Query: 506 YGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCS 565
NVD+ E A L +E ++ + LL+NIYA+ W +V ++R KM+ +G++K PGCS
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 566 SIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDS 603
I++ ++ L GD SH ++ +I +D ++K + S
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 198/424 (46%), Gaps = 44/424 (10%)
Query: 106 KGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHV 165
K + H ++K+G + D Y+ ++ Y + + +PD + S++ I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 166 KCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTP 224
K F ++ VF RM L+PD + + C L ++GK+IH L+
Sbjct: 93 KAKLFTQSIGVFSRMFSH-GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 225 IMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLF---DRS 281
+ ++ MY +CG + +AR++FD M +K+V+ ++++ Y G LE+ + + S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 282 PVR-DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
+ +IV W +++G+ + EAV +F+++ + PD+ + ++L L G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKC------------------------------- 369
+ IHGY+ + + D V +A+I+MY K
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 370 GLIEKALEIFYELREK----DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITF 425
GL++KALE+F +E+ + SWTSII G A NGK +ALELF +M G KP+ +T
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 426 IGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYG-CLIDLLGRAGLLDEAEELIRKI 484
+L AC + + GR V+ + H G LID+ + G ++ ++ + +
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 485 PNEN 488
P +N
Sbjct: 450 PTKN 453
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/489 (37%), Positives = 305/489 (62%), Gaps = 13/489 (2%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMY---GVLGKICNV----KKLFDEMPDKDVVSWNVSIS 162
+HG++++T L D +V + ++ + K N+ +F ++ + ++ +N+ I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 163 GHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-ELE 221
A + +M + + PD T + A + ++ + +G++ H I + +
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKS-RIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQ 149
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
+ N+L+ MY CG ++ A +F +M ++V+ WTSMV+GY CG +E AR++FD
Sbjct: 150 NDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEM 209
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
P R++ W+ MINGY + N F++A+ LF M+ + ++ ++V++++ CA LGALE G+
Sbjct: 210 PHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGE 269
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
+ Y+ ++ +TV+ ++ TAL++M+ +CG IEKA+ +F L E D+ SW+SII GLA++G
Sbjct: 270 RAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHG 329
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+KA+ FSQMIS G P D+TF VLSACSHGGLV++G + M + + I+P+LEHY
Sbjct: 330 HAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHY 389
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
GC++D+LGRAG L EAE I K+ + N P+ GALL AC+IY N ++ E++ +L K
Sbjct: 390 GCIVDMLGRAGKLAEAENFILKMHVKPN---APILGALLGACKIYKNTEVAERVGNMLIK 446
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVG-D 580
++ + S ++ LL+NIYA A +W+ + ++R MKE V+K PG S IEI+G I++F +G D
Sbjct: 447 VKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDD 506
Query: 581 PSHSEMKEI 589
H EM +I
Sbjct: 507 QKHPEMGKI 515
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 158/317 (49%), Gaps = 40/317 (12%)
Query: 2 TQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGN-----LLYAEKIFGSIQSPCLLAY 56
+ LK I + + L + ++L+ C S N L YA IF IQ+P L +
Sbjct: 26 SDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVF 85
Query: 57 NLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVK 116
NLLI+ F+ K+ ++++ + + PDN T+PF+ KA + V GE+ H +V+
Sbjct: 86 NLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 145
Query: 117 TGLEFDTYVCNSIMDMYGVLGKIC-------------------------------NVKKL 145
G + D YV NS++ MY G I N +++
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREM 205
Query: 146 FDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVSTLSACTALK 204
FDEMP +++ +W++ I+G+ K FE A+D+F M R+G ++ +E +VS +S+C L
Sbjct: 206 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG--VVANETVMVSVISSCAHLG 263
Query: 205 NLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVS 263
LE G+ + Y + + I+G AL+DM+ +CG + +A +F+ +P + + W+S++
Sbjct: 264 ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIK 323
Query: 264 GYVNCGQLEKARDLFDR 280
G G KA F +
Sbjct: 324 GLAVHGHAHKAMHYFSQ 340
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G++ A +F + L+++ +IK A G K++ FS++ G P + T+ V
Sbjct: 298 GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVL 357
Query: 96 KAVGWLGEVKKGEKVHGYVVKT-GLE--FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK 152
A G V+KG +++ + K G+E + Y C I+DM G GK+ + +M K
Sbjct: 358 SACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGC--IVDMLGRAGKLAEAENFILKMHVK 415
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 209/604 (34%), Positives = 326/604 (53%), Gaps = 38/604 (6%)
Query: 35 HGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYP-- 92
+G A K+F + L+++N++IK + + + K+ LF + ER V N
Sbjct: 108 NGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGY 167
Query: 93 ----------FVFKAVGWLGEVKKGEKVHGYVVKTGLE-----FDTYVCNSIMDMYGVLG 137
VF + +V + YV + +E F + +++ +LG
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLG 227
Query: 138 ------KICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 191
KI ++ FD M +DVVSWN I+G+ + + ++A +F + + D
Sbjct: 228 GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-----SPVQDVF 282
Query: 192 TVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
T + +S + +E +E+ ++ E + NA+L Y + + A+ELFD MP
Sbjct: 283 TWTAMVSGYIQNRMVEEAREL---FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
+NV W +M++GY CG++ +A++LFD+ P RD V W AMI GY Q EA+ LF +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 312 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
M+ + ++ + L+ CA + ALE GK +HG + + V AL+ MY KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
IE+A ++F E+ KD SW ++I G + +G AL F M G KPDD T + VLSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
CSH GLVD+GR++F TMT+ Y + P +HY C++DLLGRAGLL++A L++ +P E +
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
I +G LL A R++GN ++ E A + +E ++S + LL+N+YAS+ RW DV +R
Sbjct: 580 I---WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 552 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD----RMAKTLLDSKQNA 607
+M++ GV+KVPG S IEI H F VGD H E EI++ L+ RM K SK +
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSV 696
Query: 608 MEGD 611
+ D
Sbjct: 697 VLHD 700
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 194/412 (47%), Gaps = 66/412 (16%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + ++YN +I + + G F + LF ++ ER + V W
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL-------------VSW 129
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+K GYV L GK ++LF+ MP++DV SWN
Sbjct: 130 NVMIK------GYVRNRNL-----------------GK---ARELFEIMPERDVCSWNTM 163
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
+SG+ + +DA VF RM P++ V ++N ++ + + ++E
Sbjct: 164 LSGYAQNGCVDDARSVFDRM-------PEKNDVSWNALLSAYVQNSKMEEACMLFKSRE- 215
Query: 221 EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR 280
+ + N LL + K + EAR+ FD M ++V+ W ++++GY G++++AR LFD
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 281 SPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG 340
SPV+D+ WTAM++GY+Q +EA LF +M + ++ A+L G Q +E
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMA 331
Query: 341 KWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMN 400
K + + ++ +I YA+CG I +A +F ++ ++D SW ++I G + +
Sbjct: 332 KELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS 387
Query: 401 GKINKALELFSQMISGGAKPDDITFIGVLSACS-----------HGGLVDEG 441
G +AL LF QM G + + +F LS C+ HG LV G
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 33/342 (9%)
Query: 151 DKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGK 210
D D+ WNV+IS +++ R +A+ VF+R MP +V L+N E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKR-------MPRWSSVSYNGMISGYLRNGEF-- 111
Query: 211 EIHRYINQEL-EFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCG 269
E+ R + E+ E + N ++ Y + L +ARELF+ MP ++V W +M+SGY G
Sbjct: 112 ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 270 QLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVA--- 326
++ AR +FDR P ++ V W A+++ YVQ ++ +EA LF+ + + LV+
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE-------NWALVSWNC 224
Query: 327 LLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKD 386
LL G + + + + +N D V +I YA+ G I++A ++F E +D
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 387 AASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
+WT+++ G N + +A ELF +M + +++++ +L+ G ++ + F+
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
M + + +I + G + EA+ L K+P +
Sbjct: 337 VMP-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 8/279 (2%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
++ ++F + +N T N ++ + G + A+ +F + +++ +I +++
Sbjct: 329 EMAKELFDVMPCRNVSTWNTMIT--GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 386
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G ++L LF ++ G + ++ + ++ G+++HG +VK G E +V
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 446
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGC 184
N+++ MY G I LF EM KD+VSWN I+G+ + E A+ F M R+G
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG- 505
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN--ALLDMYCKCGCLSE 242
L PD+ T+V+ LSAC+ ++ G++ + Q+ P + ++D+ + G L +
Sbjct: 506 -LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 243 ARELFDEMP-NKNVICWTSMVSGYVNCGQLEKARDLFDR 280
A L MP + W +++ G E A D+
Sbjct: 565 AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 40/295 (13%)
Query: 258 WTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRL 317
W +S Y+ G+ +A +F R P V + MI+GY++ F+ A LF EM
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----- 121
Query: 318 KPDKFILV--ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKA 375
P++ ++ ++ G + L + + + + E D ++ YA+ G ++ A
Sbjct: 122 -PERDLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDA 176
Query: 376 LEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHG 435
+F + EK+ SW +++ N K+ +A LF + + V C G
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN---------WALVSWNCLLG 227
Query: 436 GLVD-----EGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNE 490
G V E R+FF++M + + +I ++G +DEA +L + P ++
Sbjct: 228 GFVKKKKIVEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD-- 280
Query: 491 IIVPLYGALLSACRIYGNVDMGEKLAALLEKI-ESKDSSFHTLLANIYASANRWE 544
V + A++S Y M E+ L +K+ E + S++ +LA Y R E
Sbjct: 281 --VFTWTAMVSG---YIQNRMVEEARELFDKMPERNEVSWNAMLAG-YVQGERME 329
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 322/609 (52%), Gaps = 19/609 (3%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ A+I ++ + +KL+ F T A +F I +YN L+ A+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTR--QDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 66 KGSFRKSLLLF------SKLRERGVSPDNFTYPFVFKAVG-----WLGEVKKGEKVHGYV 114
+ + + LF S PD+ + V KA+ WLG + + +VHG+V
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLAR--QVHGFV 158
Query: 115 VKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
++ G + D +V N ++ Y I + +K+FDEM ++DVVSWN ISG+ + FED
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR-YINQELEFTPIMGNALLDM 233
+++ M + P+ TV+S AC +L G E+H+ I ++ + NA++
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
Y KCG L AR LFDEM K+ + + +++SGY+ G +++A LF + W AMI
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMI 338
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+G +Q N +E + FREM +P+ L +LL L+ GK IH + N
Sbjct: 339 SGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD 398
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ V T++I+ YAK G + A +F +++ +WT+II A++G + A LF QM
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
G KPDD+T VLSA +H G D + F++M Y I+P +EHY C++ +L RAG
Sbjct: 459 QCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGK 518
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
L +A E I K+P + I ++GALL+ + G++++ L ++E +++ +T++
Sbjct: 519 LSDAMEFISKMPIDP---IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIM 575
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
AN+Y A RWE+ VR KMK +G++K+PG S IE + F+ D S KE+Y ++
Sbjct: 576 ANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEII 635
Query: 594 DRMAKTLLD 602
+ + +++ D
Sbjct: 636 EGLVESMSD 644
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 199/596 (33%), Positives = 323/596 (54%), Gaps = 42/596 (7%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
KQI A I + GL+ + +N L+ ++ G ++ A K+F + + ++++ L+ +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLID--SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ ++++ LF+ + + G+ PD + + + L + G +VH Y +K L D+Y
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC---MRFEDAVDVFRRMR 181
V NS++DMY + + +K+FD DVV +N I G+ + +A+++FR MR
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCKCGCL 240
+ P T VS L A +L +L L K+IH + + L G+AL+D+Y C C
Sbjct: 447 FRL-IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC- 504
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
L+ +R +FD V+D+V+W +M GYVQ +
Sbjct: 505 ------------------------------LKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
+EA+ LF E+Q+ R +PD+F ++T L +++ G+ H + + + + +
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
AL++MYAKCG E A + F +D W S+I A +G+ KAL++ +M+S G +P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
+ ITF+GVLSACSH GLV++G + F M + I+P+ EHY C++ LLGRAG L++A EL
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
I K+P + I+ + +LLS C GNV++ E A + + KDS T+L+NIYAS
Sbjct: 714 IEKMPTKPAAIV---WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK 770
Query: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
W + VR++MK GV K PG S I IN +H FL D SH + +IY +LD +
Sbjct: 771 GMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 229/478 (47%), Gaps = 55/478 (11%)
Query: 7 IQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKK 66
+ QI GL+ + N L+ + G ++YA K+F + L++++ ++ A
Sbjct: 66 VHGQIIVWGLELDTYLSNILINL--YSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 67 GSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGE----KVHGYVVKTGLEF 121
G + +SL++F + R R SP+ + +A G +G ++ ++VK+G +
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D YV ++D Y G I + +FD +P+K V+W ISG VK R ++ +F ++
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDMYCKCGCL 240
+ N++PD + + LSAC+ L LE GK+IH +I LE + N L+D Y KCG +
Sbjct: 242 ED-NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
A +LF+ MPNKN+I WT+++SGY L K
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQ-NALHK--------------------------- 332
Query: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
EA+ LF M LKPD + ++LT CA L AL G +H Y + + D+ V
Sbjct: 333 ---EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG---LAMNGKINKALELFSQMISGG 417
+LI+MYAKC + A ++F D + ++I G L ++++AL +F M
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLD 475
+P +TF+ +L A + ++ QI + YG +D+ + L+D
Sbjct: 450 IRPSLLTFVSLLRASAS----------LTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 185/379 (48%), Gaps = 43/379 (11%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMR 169
VHG ++ GLE DTY+ N ++++Y G + +K+F++MP++++VSW+ +S
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 170 FEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL--KNLELGKEIHRY-INQELEFTPIM 226
+E+++ VF + P+E + S + AC+ L + + ++ + + + +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 227 GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDI 286
G L+D Y K G + AR +FD +P K+ + WT+M+SG V G+
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR---------------- 229
Query: 287 VLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY 346
YV ++ LF ++ + PD +IL +L+ C+ L LE GK IH +
Sbjct: 230 --------SYV-------SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274
Query: 347 INENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKA 406
I + +DA + LI+ Y KCG + A ++F + K+ SWT+++ G N +A
Sbjct: 275 ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEA 334
Query: 407 LELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKL--EHY--G 462
+ELF+ M G KPD +L++C+ + F T Y I+ L + Y
Sbjct: 335 MELFTSMSKFGLKPDMYACSSILTSCASLHALG-----FGTQVHAYTIKANLGNDSYVTN 389
Query: 463 CLIDLLGRAGLLDEAEELI 481
LID+ + L +A ++
Sbjct: 390 SLIDMYAKCDCLTDARKVF 408
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 341 bits (875), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 182/471 (38%), Positives = 285/471 (60%), Gaps = 11/471 (2%)
Query: 133 YGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGT 192
Y GKI + LF + D D+ + +I+ +D + + P+E T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 193 VVSTLSACTALKNLELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 251
S L +C+ + GK IH ++ + L P + L+D+Y K G + A+++FD MP
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 252 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 311
++++ T+M++ Y G +E AR LFD RDIV W MI+GY Q ++A+ LF++
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 312 MQII-RLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCG 370
+ + KPD+ +VA L+ C+Q+GALE G+WIH ++ +RI ++ V T LI+MY+KCG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 371 LIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMIS-GGAKPDDITFIGVL 429
+E+A+ +F + KD +W ++I G AM+G AL LF++M G +P DITFIG L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 430 SACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENN 489
AC+H GLV+EG R F +M + Y I+PK+EHYGCL+ LLGRAG L A E I+ + + +
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 490 EIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNV 549
+ L+ ++L +C+++G+ +G+++A L + K+S + LL+NIYAS +E V V
Sbjct: 429 SV---LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKV 485
Query: 550 RQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
R MKE G+ K PG S+IEI +HEF GD HS+ KEIY+ML ++++ +
Sbjct: 486 RNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERI 536
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 196/433 (45%), Gaps = 73/433 (16%)
Query: 6 QIQAQIFQIGLQQNPE--TLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAF 63
QI A I + L +P LN L + + SHG + ++ +F P L + I
Sbjct: 47 QIHAAILRHNLLLHPRYPVLN-LKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTA 105
Query: 64 AKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G ++ LL+ +L ++P+ FT+ + K+ K G+ +H +V+K GL D
Sbjct: 106 SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDP 161
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDK------------------------------- 152
YV ++D+Y G + + +K+FD MP++
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 153 DVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEI 212
D+VSWNV I G+ + DA+ +F+++ PDE TVV+ LSAC+ + LE G+ I
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 213 HRYI-NQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQL 271
H ++ + + + L+DMY KCG L EA +F++ P K+++ W +M++GY
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA----- 336
Query: 272 EKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ-IIRLKPDKFILVALLTG 330
++GY Q +A+ LF EMQ I L+P + L
Sbjct: 337 ---------------------MHGYSQ-----DALRLFNEMQGITGLQPTDITFIGTLQA 370
Query: 331 CAQLGALEQGKWIHGYI-NENRITVDAVVATALIEMYAKCGLIEKALEIFYELR-EKDAA 388
CA G + +G I + E I L+ + + G +++A E + + D+
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSV 430
Query: 389 SWTSIICGLAMNG 401
W+S++ ++G
Sbjct: 431 LWSSVLGSCKLHG 443
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 32/258 (12%)
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V+ L YA G I +L +F++ + D +T+ I ++NG ++A L+ Q++S
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 124
Query: 417 GAKPDDITFIGVLSACS--HGGLVDEGRRFFNTMTEVYQIQPKLEHYGC--LIDLLGRAG 472
P++ TF +L +CS G L+ T V + ++ Y L+D+ + G
Sbjct: 125 EINPNEFTFSSLLKSCSTKSGKLIH---------THVLKFGLGIDPYVATGLVDVYAKGG 175
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
+ A+++ ++P + + A+++ GNV E AL + + +D +
Sbjct: 176 DVVSAQKVFDRMPERS----LVSSTAMITCYAKQGNV---EAARALFDSMCERDIVSWNV 228
Query: 533 LANIYASANRWEDVTNVRQKMKEMG---------VRKVPGCSSI---EINGIIHEFLVGD 580
+ + YA D + QK+ G V + CS I E IH F+
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 581 PSHSEMKEIYSMLDRMAK 598
+K ++D +K
Sbjct: 289 RIRLNVKVCTGLIDMYSK 306
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 339/668 (50%), Gaps = 80/668 (11%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLA-------- 55
+ + I G Q LN+L+ V+C L YA ++F I P +A
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYC---KSSELNYARQLFDEISEPDKIARTTMVSGY 90
Query: 56 -------------------------YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFT 90
YN +I F+ ++ LF K++ G PDNFT
Sbjct: 91 CASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFT 150
Query: 91 YPFVFKAVGWLGE-VKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK----ICNVKKL 145
+ V + + + K+ + H +K+G + T V N+++ +Y + + +K+
Sbjct: 151 FASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210
Query: 146 FDEMPDKDVVSW--------------------------------NVSISGHVKCMRFEDA 173
FDE+ +KD SW N ISG+V +++A
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 174 VDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLD 232
+++ RRM G L DE T S + AC L+LGK++H Y+ + +F+ N+L+
Sbjct: 271 LEMVRRMVSSGIEL--DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVS 328
Query: 233 MYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAM 292
+Y KCG EAR +F++MP K+++ W +++SGYV+ G + +A+ +F ++I+ W M
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
I+G + +E + LF M+ +P + + CA LGA G+ H + +
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF 448
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
ALI MYAKCG++E+A ++F + D+ SW ++I L +G +A++++ +
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M+ G +PD IT + VL+ACSH GLVD+GR++F++M VY+I P +HY LIDLL R+G
Sbjct: 509 MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSG 568
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
+AE +I +P + ++ ALLS CR++GN+++G A L + + + L
Sbjct: 569 KFSDAESVIESLPFKPT---AEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYML 625
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSM 592
L+N++A+ +WE+V VR+ M++ GV+K CS IE+ +H FLV D SH E + +Y
Sbjct: 626 LSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIY 685
Query: 593 LDRMAKTL 600
L + K +
Sbjct: 686 LQDLGKEM 693
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 169/359 (47%), Gaps = 50/359 (13%)
Query: 194 VSTLSACTALK--NLELGKEIHRYINQELEFTPIMG--NALLDMYCKCGCLSEARELFDE 249
+ L C L+ +L+L + +H I F P N L+D+YCK L+ AR+LFDE
Sbjct: 16 AANLRLCLPLRRTSLQLARAVHGNI-ITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 250 MPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPV--RDIVLWTAMINGYVQFNRFDEAVA 307
+ + I T+MVSGY G + AR +F+++PV RD V++ AMI G+ N A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 308 LFREMQIIRLKPDKFILVALLTGCAQLGALE-QGKWIHGYINENRITVDAVVATALIEMY 366
LF +M+ KPD F ++L G A + E Q H ++ V+ AL+ +Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 367 AKCG----LIEKALEIFYELREKDAASWTSIICGLAMNGKIN------------------ 404
+KC L+ A ++F E+ EKD SWT+++ G NG +
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 405 --------------KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+ALE+ +M+S G + D+ T+ V+ AC+ GL+ G++ +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 451 VYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
++ L+ L + G DEA + K+P ++ + + ALLS G++
Sbjct: 315 REDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAKD----LVSWNALLSGYVSSGHI 367
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 276/459 (60%), Gaps = 9/459 (1%)
Query: 147 DEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNL 206
++ + VSW I+ + R +A F M + P+ T ++ LS C +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLA-GVEPNHITFIALLSGCGDFTSG 87
Query: 207 E--LGKEIHRYINQ-ELEFTPIM-GNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMV 262
LG +H Y + L+ +M G A++ MY K G +AR +FD M +KN + W +M+
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 263 SGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKF 322
GY+ GQ++ A +FD+ P RD++ WTAMING+V+ +EA+ FREMQI +KPD
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 323 ILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYEL 382
++A L C LGAL G W+H Y+ + V+ +LI++Y +CG +E A ++FY +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 383 REKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGR 442
++ SW S+I G A NG +++L F +M G KPD +TF G L+ACSH GLV+EG
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 443 RFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSA 502
R+F M Y+I P++EHYGCL+DL RAG L++A +L++ +P + NE+++ G+LL+A
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI---GSLLAA 384
Query: 503 CRIYG-NVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKV 561
C +G N+ + E+L L + K S + +L+N+YA+ +WE + +R+KMK +G++K
Sbjct: 385 CSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ 444
Query: 562 PGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
PG SSIEI+ +H F+ GD +H E I +L+ ++ L
Sbjct: 445 PGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDL 483
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 176/393 (44%), Gaps = 74/393 (18%)
Query: 31 THPSHGNLLYAEKIFGSIQSP--CLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDN 88
TH +H N KI QS +++ I + G ++ FS + GV P++
Sbjct: 16 THKNHAN----PKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNH 71
Query: 89 FTYPFVFKAVGWL--GEVKKGEKVHGYVVKTGLE-------------------------- 120
T+ + G G G+ +HGY K GL+
Sbjct: 72 ITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLV 131
Query: 121 FD------TYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAV 174
FD + N+++D Y G++ N K+FD+MP++D++SW I+G VK E+A+
Sbjct: 132 FDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEAL 191
Query: 175 DVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI-NQELEFTPIMGNALLDM 233
FR M Q + PD +++ L+ACT L L G +HRY+ +Q+ + + N+L+D+
Sbjct: 192 LWFREM-QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDL 250
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
YC+CGC+ AR++F M + V+ W S++ G+ G
Sbjct: 251 YCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAH--------------------- 289
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRI 352
E++ FR+MQ KPD LT C+ +G +E+G ++ + RI
Sbjct: 290 ----------ESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRI 339
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
+ L+++Y++ G +E AL++ + K
Sbjct: 340 SPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 138/294 (46%), Gaps = 16/294 (5%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVF 95
G + A K+F + L+++ +I F KKG ++LL F +++ GV PD
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 96 KAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV 155
A LG + G VH YV+ + + V NS++D+Y G + +++F M + VV
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 156 SWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY 215
SWN I G +++ FR+M++ PD T L+AC+ + +E G +
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEK-GFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 216 INQELEFTPIMGN--ALLDMYCKCGCLSEARELFDEMPNK-NVICWTSMVSGYVNCGQ-- 270
+ + +P + + L+D+Y + G L +A +L MP K N + S+++ N G
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 271 ------LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLK 318
++ DL +S ++L N Y +++ A + R+M+ + LK
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVIL----SNMYAADGKWEGASKMRRKMKGLGLK 442
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/593 (32%), Positives = 318/593 (53%), Gaps = 37/593 (6%)
Query: 6 QIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAK 65
Q+ A ++G NP ++ ++ L A +F I + +N LI + K
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 66 KGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYV 125
G + +S+ LF K+R+ G P +FT+ V KAV L + G+++H V TG D V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 126 CNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCN 185
N I+D Y ++ + LFDEMP+ D VS+NV IS + + ++E ++ FR M Q
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM-QCMG 346
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIH-RYINQELEFTPIMGNALLDMYCKCGCLSEAR 244
+ LS L +L++G+++H + + + +GN+L+DMY KC
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC------- 399
Query: 245 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 304
E+F+E A +F P R V WTA+I+GYVQ
Sbjct: 400 EMFEE------------------------AELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 305 AVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIE 364
+ LF +M+ L+ D+ +L A +L GK +H +I + + + L++
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 365 MYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDIT 424
MYAKCG I+ A+++F E+ +++A SW ++I A NG A+ F++MI G +PD ++
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 425 FIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKI 484
+GVL+ACSH G V++G +F M+ +Y I PK +HY C++DLLGR G EAE+L+ ++
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 485 PNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES-KDSSFHTLLANIYASANRW 543
P E +EI ++ ++L+ACRI+ N + E+ A L +E +D++ + ++NIYA+A W
Sbjct: 616 PFEPDEI---MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEW 672
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRM 596
E V +V++ M+E G++KVP S +E+N IH F D +H EI ++ +
Sbjct: 673 EKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINEL 725
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 190/414 (45%), Gaps = 41/414 (9%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+Q+ A G ++ N+++ F + H +L +F + ++YN++I +++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDF--YSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ + SL F +++ G NF + + L ++ G ++H + + +
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
V NS++DMY + +F +P + VSW ISG+V+ + +F +MR G
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR-GS 446
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIM-GNALLDMYCKCGCLSEA 243
NL D+ T + L A + +L LGK++H +I + + G+ L+DMY KCG + +A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
++F+EMP++N + W +++S + + G E
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEA------------------------------ 536
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVVATAL 362
A+ F +M L+PD ++ +LT C+ G +EQG ++ IT +
Sbjct: 537 -AIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 363 IEMYAKCGLIEKALEIFYELR-EKDAASWTSII--CGLAMNGKINK--ALELFS 411
+++ + G +A ++ E+ E D W+S++ C + N + + A +LFS
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 214 RYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
R I + N +++ + G +S AR+++DEMP+KN + +M+SG+V G +
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSS 97
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM--QIIRLKPDKFILVALLTGC 331
ARDLFD P R +V WT ++ Y + + FDEA LFR+M PD LL GC
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 332 AQLGALEQGKWIHGYINENRITVDA--VVATALIEMYAKCGLIEKALEIFYELREKDAAS 389
+H + + + V+ L++ Y + ++ A +F E+ EKD+ +
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 390 WTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
+ ++I G +G +++ LF +M G +P D TF GVL A
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/518 (21%), Positives = 211/518 (40%), Gaps = 92/518 (17%)
Query: 77 SKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVL 136
+++ + G D F+ + + G+V KV+ + +T N+++ +
Sbjct: 37 ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHK----NTVSTNTMISGHVKT 92
Query: 137 GKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM-RQGCNLMPDEGTVVS 195
G + + + LFD MPD+ VV+W + + + + F++A +FR+M R +PD T +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 196 TLSACTALKNLELGKEIHRY-INQELEFTPIM--GNALLDMYCKCGCLSEARELFDEMPN 252
L C ++H + + + P + N LL YC+ L A LF+E+P
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLF------DRSP------------------------ 282
K+ + + ++++GY G ++ LF P
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 283 ---------VRDIVLWTAMINGYVQFNRFDEAVALFREM--------------------- 312
RD + +++ Y + +R E LF EM
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 313 ----------QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV--VAT 360
Q + F +L+ A L +L+ G+ +H T D++ V
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH--CQALLATADSILHVGN 390
Query: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
+L++MYAKC + E+A IF L ++ SWT++I G G L+LF++M +
Sbjct: 391 SLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRA 450
Query: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
D TF VL A + + G++ + ++ G L+D+ + G + +A ++
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQV 509
Query: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
++P+ N + AL+SA + D G+ AA+
Sbjct: 510 FEEMPDRN----AVSWNALISA-----HADNGDGEAAI 538
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 331/651 (50%), Gaps = 81/651 (12%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++FG + L +N L+K+ +++ + + L FS + PDNFT P KA G
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 101 LGEVKKGEKVHGYVVK-TGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
L EV GE +HG+V K L D YV +S++ MY G++ ++FDE+ D+V+W+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 160 SISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQ 218
+SG K AV+ FRRM ++ PD T+++ +SACT L N LG+ +H + I +
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 219 ELEFTPIMGNALLDMYCKC-------------------------------GCLSEARELF 247
+ N+LL+ Y K G +EA +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 248 DEM------PN-KNVIC--------------------------------WTSMVSGYVNC 268
++M PN V+C T++V Y+ C
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 269 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIR-LKPDKFILVAL 327
E+A +F R P +D+V W A+I+G+ ++ F M + +PD ++V +
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 328 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 387
L C++LG LEQ K H Y+ + + + +L+E+Y++CG + A ++F + KD
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 388 ASWTSIICGLAMNGKINKALELFSQMI-SGGAKPDDITFIGVLSACSHGGLVDEGRRFFN 446
WTS+I G ++GK KALE F+ M+ S KP+++TF+ +LSACSH GL+ EG R F
Sbjct: 433 VVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 447 TMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY 506
M Y++ P LEHY L+DLLGR G LD A E+ +++P I+ G LL ACRI+
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL---GTLLGACRIH 549
Query: 507 GNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSS 566
N +M E +A L ++ES + ++ L++N+Y WE+V +R +K+ G++K S
Sbjct: 550 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 609
Query: 567 IEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAM----EGDNL 613
IEI +H F+ D H E + +Y +L + + + +N + EGD+L
Sbjct: 610 IEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDLENCVYFEYEGDSL 660
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 194/441 (43%), Gaps = 80/441 (18%)
Query: 141 NVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSAC 200
+ +++F EM + + WN + + ++E+ + F M + PD T+ L AC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRD-EEKPDNFTLPVALKAC 70
Query: 201 TALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGCLSEARELFDEMPNKNVICW 258
L+ + G+ IH ++ +++ +G++L+ MY KCG + EA +FDE+ +++ W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 259 TSMVSGYVNCGQLEKARDLFDR-------SPVR--------------------------- 284
+SMVSG+ G +A + F R +P R
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 285 ------DIVLWTAMINGYVQFNRFDEAVALFR---EMQIIR------------------- 316
D+ L +++N Y + F EAV LF+ E +I
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 317 ---------LKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYA 367
+P+ ++ +L CA LEQG+ H + + V+TAL++MY
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 368 KCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM-ISGGAKPDDITFI 426
KC E+A +F + KD SW ++I G +NG ++++E FS M + +PD I +
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 427 GVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPN 486
VL +CS G +++ + F + + + Y L++L R G L A ++ I
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 487 ENNEIIVPLYGALLSACRIYG 507
++ + + +L++ I+G
Sbjct: 430 KDTVV----WTSLITGYGIHG 446
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 211/608 (34%), Positives = 316/608 (51%), Gaps = 85/608 (13%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVG 99
A K+F + ++++N +I+++AK G + +L +FS++ E G PDN T V
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 100 WLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNV 159
LG G+++H + V + + + +V N ++DMY G + +F M KDVVSWN
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 160 SISGHVKCMRFEDAVDVFRRMRQ----------------------------------GCN 185
++G+ + RFEDAV +F +M++
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 186 LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTP-------IMGNALLDMYCKC 237
+ P+E T++S LS C ++ L GKEIH Y I ++ ++ N L+DMY KC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDR-SPV-RDIVLWTAMING 295
+++ AR +FD SP RD+V WT MI G
Sbjct: 421 K-------------------------------KVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 296 YVQFNRFDEAVALFREM--QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI- 352
Y Q ++A+ L EM + + +P+ F + L CA L AL GK IH Y N+
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
V V+ LI+MYAKCG I A +F + K+ +WTS++ G M+G +AL +F +
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 413 MISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAG 472
M G K D +T + VL ACSH G++D+G +FN M V+ + P EHY CL+DLLGRAG
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 473 LLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTL 532
L+ A LI ++P E ++ + A LS CRI+G V++GE A + ++ S +TL
Sbjct: 630 RLNAALRLIEEMPMEPPPVV---WVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 533 LANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIE-INGIIHEFLVGDPSHSEMKEIYS 591
L+N+YA+A RW+DVT +R M+ GV+K PGCS +E I G F VGD +H KEIY
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQ 745
Query: 592 -MLDRMAK 598
+LD M +
Sbjct: 746 VLLDHMQR 753
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 258/497 (51%), Gaps = 23/497 (4%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLN-KLMVFCTHPSHGNLLYAEKIFGSI--QSPCLLAYN 57
++Q+K I ++ G+ TLN + T+ S G L +A + + +N
Sbjct: 41 ISQVKLIHQKLLSFGIL----TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 58 LLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKT 117
LI+++ G K L LF + +PDN+T+PFVFKA G + V+ GE H + T
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 118 GLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVF 177
G + +V N+++ MY + + +K+FDEM DVVSWN I + K + + A+++F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 178 RRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCK 236
RM PD T+V+ L C +L LGK++H + + E+ +GN L+DMY K
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR----DIVLWTAM 292
CG + EA +F M K+V+ W +MV+GY G+ E A LF++ D+V W+A
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGY------ 346
I+GY Q EA+ + R+M +KP++ L+++L+GCA +GAL GK IH Y
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 347 -INENRITVDAVVATALIEMYAKCGLIEKALEIFYEL--REKDAASWTSIICGLAMNGKI 403
+ +N + +V LI+MYAKC ++ A +F L +E+D +WT +I G + +G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 404 NKALELFSQMISGG--AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
NKALEL S+M +P+ T L AC+ + G++ Q L
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 462 GCLIDLLGRAGLLDEAE 478
CLID+ + G + +A
Sbjct: 517 NCLIDMYAKCGSISDAR 533
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 338 bits (868), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 313/559 (55%), Gaps = 41/559 (7%)
Query: 53 LLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHG 112
+ ++N +I A+ G ++LL FS +R+ + P ++P KA L ++ G++ H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 113 YVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFED 172
G + D +V ++++ MY GK+ + +K+FDE+P +++VSW I G+ D
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 173 AVDVFRRMRQGCN-----LMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIM 226
AV +F+ + N + D +VS +SAC+ + L + IH + I + + +
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 227 GNALLDMYCKC--GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVR 284
GN LLD Y K G ++ AR++FD++ +K+ + + S++S Y G +A ++F R
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR---- 276
Query: 285 DIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIH 344
+ N V FN L +L + GAL GK IH
Sbjct: 277 ------LVKNKVVTFN--------------------AITLSTVLLAVSHSGALRIGKCIH 310
Query: 345 GYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKIN 404
+ + D +V T++I+MY KCG +E A + F ++ K+ SWT++I G M+G
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 405 KALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCL 464
KALELF MI G +P+ ITF+ VL+ACSH GL EG R+FN M + ++P LEHYGC+
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCM 430
Query: 465 IDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIES 524
+DLLGRAG L +A +LI+++ + + II + +LL+ACRI+ NV++ E A L +++S
Sbjct: 431 VDLLGRAGFLQKAYDLIQRMKMKPDSII---WSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 525 KDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHS 584
+ ++ LL++IYA A RW+DV VR MK G+ K PG S +E+NG +H FL+GD H
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 585 EMKEIYSMLDRMAKTLLDS 603
+ ++IY L + + LL++
Sbjct: 548 QREKIYEFLAELNRKLLEA 566
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 11/267 (4%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
+ I + + + G + N L+ G + A KIF I ++YN ++ +A
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 65 KKGSFRKSLLLFSKL-RERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDT 123
+ G ++ +F +L + + V+ + T V AV G ++ G+ +H V++ GLE D
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 124 YVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQG 183
V SI+DMY G++ +K FD M +K+V SW I+G+ A+++F M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 184 CNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ---ELEFTPIMGN--ALLDMYCKCG 238
+ P+ T VS L+AC+ + L E R+ N P + + ++D+ + G
Sbjct: 383 -GVRPNYITFVSVLAACS---HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 239 CLSEARELFDEMPNK-NVICWTSMVSG 264
L +A +L M K + I W+S+++
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 384 EKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRR 443
+ D SW S+I LA +G +AL FS M P +F + ACS + G++
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 444 FFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNEN 488
+ V+ Q + LI + G L++A ++ +IP N
Sbjct: 98 -THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 335 bits (860), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 301/552 (54%), Gaps = 35/552 (6%)
Query: 43 KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLG 102
++F + + ++N +I F + G K+L LF ++ G P++ + A L
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 103 EVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSIS 162
+++G+++H VK G E D YV ++++DMYG + +++F +MP K +V+WN I
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 163 GHVKCMRFEDAVDVFRRMR-QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELE 221
G+V + V++ RM +G P + T+ S L AC+ +NL GK IH Y+ + +
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTR--PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVV 340
Query: 222 FTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRS 281
NA D+Y C S++ Y CG+ A +F ++
Sbjct: 341 ------NA--DIYVNC----------------------SLIDLYFKCGEANLAETVFSKT 370
Query: 282 PVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGK 341
W MI+ Y+ + +AV ++ +M + +KPD ++L C+QL ALE+GK
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 342 WIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNG 401
IH I+E+R+ D ++ +AL++MY+KCG ++A IF + +KD SWT +I +G
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 402 KINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHY 461
+ +AL F +M G KPD +T + VLSAC H GL+DEG +FF+ M Y I+P +EHY
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY 550
Query: 462 GCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEK 521
C+ID+LGRAG L EA E+I++ P ++ L L SAC ++ +G+++A LL +
Sbjct: 551 SCMIDILGRAGRLLEAYEIIQQTPETSDN--AELLSTLFSACCLHLEHSLGDRIARLLVE 608
Query: 522 IESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDP 581
D+S + +L N+YAS W+ VR KMKEMG+RK PGCS IE++ + F D
Sbjct: 609 NYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDR 668
Query: 582 SHSEMKEIYSML 593
SH + +Y L
Sbjct: 669 SHLRAENVYECL 680
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/504 (30%), Positives = 256/504 (50%), Gaps = 41/504 (8%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+ ++K + +I +GL+++ L+ V+ T H + + + F I+S + +N L
Sbjct: 20 LRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF-DIRSDVYI-WNSL 77
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ ++K F +L +F +L + PD+FT+P V KA G LG G +H VVK+G
Sbjct: 78 MSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSG 137
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFR 178
D V +S++ MY N ++FDEMP++DV SWN IS + E A+++F
Sbjct: 138 YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFG 197
Query: 179 RMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKC 237
RM + P+ ++ +SAC+ L LE GKEIHR + + E + +AL+DMY KC
Sbjct: 198 RM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 238 GCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYV 297
CL ARE+F +MP K+++ W SM+ GYV G + ++ +R
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR----------------- 299
Query: 298 QFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAV 357
M I +P + L ++L C++ L GK+IHGY+ + + D
Sbjct: 300 --------------MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 358 VATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
V +LI++Y KCG A +F + ++ A SW +I G KA+E++ QM+S G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 418 AKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEA 477
KPD +TF VL ACS +++G++ +++E +++ L+D+ + G EA
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEA 464
Query: 478 EELIRKIPNENN---EIIVPLYGA 498
+ IP ++ +++ YG+
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGS 488
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 195/418 (46%), Gaps = 43/418 (10%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
A ++F + L+A+N +IK + KG + + + +++ G P T + A
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
+ G+ +HGYV+++ + D YV S++D+Y G+ + +F + SWNV
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQ-E 219
IS ++ + AV+V+ +M + PD T S L AC+ L LE GK+IH I++
Sbjct: 382 ISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 220 LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFD 279
LE ++ +ALLDMY KCG EA +F+ +P K+V+ WT M+S Y + GQ
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR------- 493
Query: 280 RSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQ 339
EA+ F EMQ LKPD L+A+L+ C G +++
Sbjct: 494 ------------------------EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDE 529
Query: 340 GKWIHGYINENRITVDAVVA--TALIEMYAKCGLIEKALEIFYELRE-KDAASWTSII-- 394
G + ++ ++ ++ + +I++ + G + +A EI + E D A S +
Sbjct: 530 GLKFFSQM-RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFS 588
Query: 395 -CGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
C L + + + ++++ D T++ + + + G D RR M E+
Sbjct: 589 ACCLHLEHSLGDRI---ARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEM 643
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 184/410 (44%), Gaps = 32/410 (7%)
Query: 110 VHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDK-DVVSWNVSISGHVKCM 168
VH ++ GL D +C S++++Y C+ + +F+ + DV WN +SG+ K
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 169 RFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGN 228
F D ++VF+R+ +PD T + + A AL LG+ IH +
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV------------ 133
Query: 229 ALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVL 288
K G + +V+ +S+V Y E + +FD P RD+
Sbjct: 134 ------VKSGYVC------------DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVAS 175
Query: 289 WTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYIN 348
W +I+ + Q ++A+ LF M+ +P+ L ++ C++L LE+GK IH
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 349 ENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALE 408
+ +D V +AL++MY KC +E A E+F ++ K +W S+I G G +E
Sbjct: 236 KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295
Query: 409 LFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLL 468
+ ++MI G +P T +L ACS + G +F + + + LIDL
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 469 GRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAAL 518
+ G + AE + K + E + + +S + V++ +++ ++
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV 404
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 16/291 (5%)
Query: 41 AEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGW 100
AE +F Q ++N++I ++ G++ K++ ++ ++ GV PD T+ V A
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 101 LGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVS 160
L ++KG+++H + ++ LE D + ++++DMY G ++F+ +P KDVVSW V
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVM 482
Query: 161 ISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQEL 220
IS + + +A+ F M Q L PD T+++ LSAC ++ G + + +
Sbjct: 483 ISAYGSHGQPREALYQFDEM-QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
Query: 221 EFTPIMGN--ALLDMYCKCGCLSEARELFDEMP--NKNVICWTSMVSGYVNCGQLEK--- 273
PI+ + ++D+ + G L EA E+ + P + N +++ S C LE
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSA--CCLHLEHSLG 599
Query: 274 ---ARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQI--IRLKP 319
AR L + P D + + N Y +D A + +M+ +R KP
Sbjct: 600 DRIARLLVENYP-DDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKP 649
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 317/591 (53%), Gaps = 41/591 (6%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFA 64
K++ + + G + + + +N L+ + G++ A +F + ++++N +I +
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITM--YVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 65 KKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTY 124
+ G + L LF +R V PD T V A LG+ + G +H YV+ TG D
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 125 VCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGC 184
VCNS+ MY G +KLF M KD+VSW ISG+ + A+D +R M Q
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD- 392
Query: 185 NLMPDEGTVVSTLSACTALKNLELGKEIHRY-INQELEFTPIMGNALLDMYCKCGCLSEA 243
++ PDE TV + LSAC L +L+ G E+H+ I L I+ N L++MY KC C+
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI--- 449
Query: 244 RELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFD 303
+KA D+F P ++++ WT++I G NR
Sbjct: 450 ----------------------------DKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481
Query: 304 EAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALI 363
EA+ R+M++ L+P+ L A L CA++GAL GK IH ++ + +D + AL+
Sbjct: 482 EALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALL 540
Query: 364 EMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDI 423
+MY +CG + A F ++KD SW ++ G + G+ + +ELF +M+ +PD+I
Sbjct: 541 DMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599
Query: 424 TFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRK 483
TFI +L CS +V +G +F+ M E Y + P L+HY C++DLLGRAG L EA + I+K
Sbjct: 600 TFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQK 658
Query: 484 IPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRW 543
+P + + +GALL+ACRI+ +D+GE A + +++ K ++ LL N+YA +W
Sbjct: 659 MPVTPDPAV---WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKW 715
Query: 544 EDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLD 594
+V VR+ MKE G+ GCS +E+ G +H FL D H + KEI ++L+
Sbjct: 716 REVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 208/381 (54%), Gaps = 36/381 (9%)
Query: 36 GNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSK-LRERGVSPDNFTYPFV 94
GNL+ A +FG + L ++N+L+ +AK+G F +++ L+ + L GV PD +T+P V
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 95 FKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDV 154
+ G + ++ +G++VH +VV+ G E D V N+++ MY G + + + LFD MP +D+
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 155 VSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHR 214
+SWN ISG+ + + +++F MR G ++ PD T+ S +SAC L + LG++IH
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMR-GLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 215 Y-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEK 273
Y I + N+L MY G EA +LF M K+++ WT+M+SGY
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY-------- 373
Query: 274 ARDLFDRSPVRDIVLWTAMINGYVQFNRF-DEAVALFREMQIIRLKPDKFILVALLTGCA 332
++N D+A+ +R M +KPD+ + A+L+ CA
Sbjct: 374 ------------------------EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA 409
Query: 333 QLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTS 392
LG L+ G +H + R+ +VA LI MY+KC I+KAL+IF+ + K+ SWTS
Sbjct: 410 TLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTS 469
Query: 393 IICGLAMNGKINKALELFSQM 413
II GL +N + +AL QM
Sbjct: 470 IIAGLRLNNRCFEALIFLRQM 490
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 204/438 (46%), Gaps = 49/438 (11%)
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
+ G +++ L + ++E V+ D + + + W ++G KV+ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRR 179
+ N+ + M+ G + + +F +M ++++ SWNV + G+ K F++A+ ++ R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 180 MRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI---NQELEFTPIMGNALLDMYCK 236
M + PD T L C + +L GKE+H ++ EL+ + NAL+ MY K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV--NALITMYVK 243
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG + AR LFD MP +++I W +M+SGY G
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH------------------------ 279
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
E + LF M+ + + PD L ++++ C LG G+ IH Y+ VD
Sbjct: 280 -------EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
V +L +MY G +A ++F + KD SWT++I G N +KA++ + M
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQ--IQPKLEHY----GCLIDLLGR 470
KPD+IT VLSAC+ G +D G E+++ I+ +L Y LI++ +
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTG-------VELHKLAIKARLISYVIVANNLINMYSK 445
Query: 471 AGLLDEAEELIRKIPNEN 488
+D+A ++ IP +N
Sbjct: 446 CKCIDKALDIFHNIPRKN 463
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 147/337 (43%), Gaps = 45/337 (13%)
Query: 293 INGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRI 352
++G + +EA+ L MQ +R+ D+ + VAL+ C A E+G ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 353 TVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQ 412
++ + A + M+ + G + A +F ++ E++ SW ++ G A G ++A+ L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 413 MI-SGGAKPDDITFIGVLSACSHGGLVDEGR-RFFNTMTEVYQIQPKLEHYGCLIDLLGR 470
M+ GG KPD TF VL C GG+ D R + + Y + ++ LI + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 471 AGLLDEAEELIRKIP--------------------NENNEIIVPLYG-----------AL 499
G + A L ++P +E E+ + G ++
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 500 LSACRIYGNVDMGEKLAA-LLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+SAC + G+ +G + A ++ + D S L +Y +A W + + +M+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME---- 359
Query: 559 RKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDR 595
RK + I+G + FL P + + Y M+D+
Sbjct: 360 RKDIVSWTTMISGYEYNFL---PDKA--IDTYRMMDQ 391
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 320/568 (56%), Gaps = 47/568 (8%)
Query: 3 QLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLIKA 62
L QI A+I + GL+Q+ + L + + + S +L Y+ +F + SP +N LIK
Sbjct: 25 HLNQIHARIIRKGLEQD-QNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKG 83
Query: 63 FAKKGSFRKSLLLFSKLRERGVS-PDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
++ K F +++ + ++ G++ PD +T+P V K G+V+ G VHG V++ G +
Sbjct: 84 YSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDK 143
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
D V S +D YG + + +K+F EMP+++ VSW + +VK E+A +F
Sbjct: 144 DVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF---- 199
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLS 241
+LMP+ LG NAL+D K G L
Sbjct: 200 ---DLMPERN----------------LGS----------------WNALVDGLVKSGDLV 224
Query: 242 EARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNR 301
A++LFDEMP +++I +TSM+ GY G + ARDLF+ + D+ W+A+I GY Q +
Sbjct: 225 NAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQ 284
Query: 302 FDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINE--NRITVDAVVA 359
+EA +F EM +KPD+FI+V L++ C+Q+G E + + Y+++ N+ + VV
Sbjct: 285 PNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP 344
Query: 360 TALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAK 419
ALI+M AKCG +++A ++F E+ ++D S+ S++ G+A++G ++A+ LF +M+ G
Sbjct: 345 -ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIV 403
Query: 420 PDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEE 479
PD++ F +L C LV+EG R+F M + Y I +HY C+++LL R G L EA E
Sbjct: 404 PDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYE 463
Query: 480 LIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYAS 539
LI+ +P E + +G+LL C ++GN ++ E +A L ++E + + + LL+NIYA+
Sbjct: 464 LIKSMPFEAH---ASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAA 520
Query: 540 ANRWEDVTNVRQKMKEMGVRKVPGCSSI 567
+RW DV ++R KM E G+ K+ G S I
Sbjct: 521 LDRWTDVAHLRDKMNENGITKICGRSWI 548
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 335 bits (858), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 314/559 (56%), Gaps = 18/559 (3%)
Query: 37 NLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFK 96
N+ A+ +F + ++ +YN +I ++++ K+LLLF +L G+ D + VF+
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 97 AVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS 156
A + + +G +++G +K+ L D V N+ +DMYG + ++FDEM +D VS
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 450
Query: 157 WNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYI 216
WN I+ H + + + + +F M + + PDE T S L ACT +L G EIH I
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 508
Query: 217 NQE-LEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKAR 275
+ + +G +L+DMY KCG + EA ++ + + G +E+
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELE 557
Query: 276 DLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLG 335
+ ++ V W ++I+GYV + ++A LF M + + PDKF +L CA L
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 336 ALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIIC 395
+ GK IH + + + D + + L++MY+KCG + + +F + +D +W ++IC
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 396 GLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQ 455
G A +GK +A++LF +MI KP+ +TFI +L AC+H GL+D+G +F M Y +
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 456 PKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIY-GNVDMGEK 514
P+L HY ++D+LG++G + A ELIR++P E +++I + LL C I+ NV++ E+
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVI---WRTLLGVCTIHRNNVEVAEE 794
Query: 515 LAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIH 574
A L +++ +DSS +TLL+N+YA A WE V+++R+ M+ ++K PGCS +E+ +H
Sbjct: 795 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELH 854
Query: 575 EFLVGDPSHSEMKEIYSML 593
FLVGD +H +EIY L
Sbjct: 855 VFLVGDKAHPRWEEIYEEL 873
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 242/529 (45%), Gaps = 55/529 (10%)
Query: 32 HPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTY 91
+ ++ A F + ++++N ++ + + G KS+ +F + G+ D T+
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 92 PFVFKAVGWLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPD 151
+ K +L + G ++HG VV+ G + D ++++DMY + ++F +P+
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 152 KDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKE 211
K+ VSW+ I+G V+ A+ F+ M Q N + S L +C AL L LG +
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEM-QKVNAGVSQSIYASVLRSCAALSELRLGGQ 302
Query: 212 IHRY-INQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQ 270
+H + + + I+ A LDMY KC
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCD-------------------------------N 331
Query: 271 LEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTG 330
++ A+ LFD S + + AMI GY Q +A+ LF + L D+ L +
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 331 CAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASW 390
CA + L +G I+G ++ +++D VA A I+MY KC + +A +F E+R +DA SW
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 391 TSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTE 450
+II NGK + L LF M+ +PD+ TF +L AC+ GG + G +++
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-- 508
Query: 451 VYQIQPKLEHYGC-LIDLLGRAGLLDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNV 509
V GC LID+ + G+++EAE++ + N + G +
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN---------------VSGTM 553
Query: 510 DMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQKMKEMGV 558
+ EK+ ++++ S++++++ Y + ED + +M EMG+
Sbjct: 554 EELEKMHN--KRLQEMCVSWNSIISG-YVMKEQSEDAQMLFTRMMEMGI 599
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 203/477 (42%), Gaps = 81/477 (16%)
Query: 61 KAFAKKGSFRK--SLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTG 118
+ +K S+R+ S F+ + S + FVFK G ++ G++ H +++ +G
Sbjct: 19 RCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISG 78
Query: 119 LEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKC----------- 167
T+V N ++ +Y + +FD+MP +DVVSWN I+G+ K
Sbjct: 79 FRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFN 138
Query: 168 -MRFED-------------------AVDVFRRM-RQGCNLMPDEGTVVSTLSACTALKNL 206
M D +++VF M R+G D T L C+ L++
Sbjct: 139 MMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF--DGRTFAIILKVCSFLEDT 196
Query: 207 ELGKEIHRYINQ-ELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSGY 265
LG +IH + + + + +ALLDMY K E+ +F +P KN + W
Sbjct: 197 SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW------- 249
Query: 266 VNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQIIRLKPDKFILV 325
+A+I G VQ N A+ F+EMQ + + I
Sbjct: 250 ------------------------SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 326 ALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREK 385
++L CA L L G +H + ++ D +V TA ++MYAKC ++ A +F
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 386 DAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFF 445
+ S+ ++I G + KAL LF +++S G D+I+ GV AC+ + EG + +
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 446 NTMTEVYQIQPKLEHYGCL----IDLLGRAGLLDEA----EELIRKIPNENNEIIVP 494
I+ L C+ ID+ G+ L EA +E+ R+ N II
Sbjct: 406 GL-----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 174/489 (35%), Positives = 283/489 (57%), Gaps = 40/489 (8%)
Query: 108 EKVHGYVVKTGLEFDTYVCNSIMDMYGVLGK---ICNVKKLFDEMPDKDVVSWNVSISGH 164
++ H +++KTGL DT+ + ++ + + + + + + + N I +
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 165 VKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIH----------- 213
E A+ VFR M G + PD+ + L AC A E G++IH
Sbjct: 116 ANSSTPEVALTVFREMLLG-PVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTD 174
Query: 214 -----------------RYINQELEFTPIMG----NALLDMYCKCGCLSEARELFDEMPN 252
+ L+ P+ N+LL Y + G + EAR LFDEM
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEE 234
Query: 253 KNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREM 312
+NV W M+SGY G +++A+++FD PVRD+V W AM+ Y ++E + +F +M
Sbjct: 235 RNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Query: 313 -QIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 371
KPD F LV++L+ CA LG+L QG+W+H YI+++ I ++ +ATAL++MY+KCG
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGK 354
Query: 372 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 431
I+KALE+F ++D ++W SII L+++G ALE+FS+M+ G KP+ ITFIGVLSA
Sbjct: 355 IDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
Query: 432 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEELIRKIPNENNEI 491
C+H G++D+ R+ F M+ VY+++P +EHYGC++DLLGR G ++EAEEL+ +IP + I
Sbjct: 415 CNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASI 474
Query: 492 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 551
++ +LL AC+ +G ++ E++A L ++ +DSS + ++N+YAS RWE V + R+
Sbjct: 475 LLE---SLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRR 531
Query: 552 KMKEMGVRK 560
M+ V +
Sbjct: 532 NMRAERVNR 540
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 214/515 (41%), Gaps = 128/515 (24%)
Query: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFC-THPSHGNLLYAEKIFGSIQSPCLLAYNLL 59
+T+++Q A + + GL + + +KL+ F T+P + YA I I SP +N +
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 60 IKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGL 119
I+A+A + +L +F ++ V PD +++ FV KA ++G ++HG +K+GL
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 120 EFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVV------------------------ 155
D +V N+++++YG G +K+ D MP +D V
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 156 -------SWNVSISGHVKCMRFEDAVDVFRRM----------------RQGC-------- 184
SWN ISG+ ++A +VF M GC
Sbjct: 232 MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Query: 185 NLMPDEG-------TVVSTLSACTALKNLELGKEIHRYINQE-LEFTPIMGNALLDMYCK 236
N M D+ T+VS LSAC +L +L G+ +H YI++ +E + AL+DMY K
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK 351
Query: 237 CGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGY 296
CG + +A E+F ++V W S++S DL +D
Sbjct: 352 CGKIDKALEVFRATSKRDVSTWNSIIS------------DLSVHGLGKD----------- 388
Query: 297 VQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDA 356
A+ +F EM KP+ + +L+ C +G L+Q
Sbjct: 389 --------ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQ----------------- 423
Query: 357 VVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISG 416
A L EM + +E +E + ++ L GKI +A EL +++ +
Sbjct: 424 --ARKLFEMMSSVYRVEPTIE-----------HYGCMVDLLGRMGKIEEAEELVNEIPAD 470
Query: 417 GAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEV 451
A I +L AC G +++ R N + E+
Sbjct: 471 EAS---ILLESLLGACKRFGQLEQAERIANRLLEL 502
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 294/553 (53%), Gaps = 36/553 (6%)
Query: 56 YNLLIKAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVV 115
+N+ ++ A + F +S+ L+ + G SPD F++PF+ K+ L G+++H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 116 KTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVS--WNVSISGHVKCMRFEDA 173
K G E + +V +++ MY G + + +K+F+E P +S +N ISG+ + DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 174 VDVFRRMRQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDM 233
+FRRM++ + D T++ + CT + L LG+ +H
Sbjct: 141 AYMFRRMKE-TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ------------------ 181
Query: 234 YCKCGCLSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMI 293
C G L + V S ++ Y+ CG +E R LFD PV+ ++ W A+I
Sbjct: 182 -CVKGGL-----------DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 294 NGYVQFNRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRIT 353
+GY Q + + L+ +M+ + PD F LV++L+ CA LGA + G + + N
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 354 VDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQM 413
+ V+ A I MYA+CG + KA +F + K SWT++I M+G L LF M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 414 ISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGL 473
I G +PD F+ VLSACSH GL D+G F M Y+++P EHY CL+DLLGRAG
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 474 LDEAEELIRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLL 533
LDEA E I +P E + + +GALL AC+I+ NVDM E A + + E + ++ L+
Sbjct: 410 LDEAMEFIESMPVEPDGAV---WGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLM 466
Query: 534 ANIYASANRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSML 593
+NIY+ + E + +R M+E RK PG S +E G +H FL GD SH + +E++ ML
Sbjct: 467 SNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRML 526
Query: 594 DRMAKTLLDSKQN 606
D + ++++ N
Sbjct: 527 DELETSVMELAGN 539
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 202/433 (46%), Gaps = 45/433 (10%)
Query: 5 KQIQAQIFQIGLQQNPETLNKLM-VFCTHPSHGNLLYAEKIF--GSIQSPCLLAYNLLIK 61
+Q+ + + G + P L L+ ++C G + A K+F S + YN LI
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYC---KCGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 62 AFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLEF 121
+ + +F +++E GVS D+ T + + G +HG VK GL+
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189
Query: 122 DTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMR 181
+ V NS + MY G + ++LFDEMP K +++WN ISG+ + D ++++ +M+
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK 249
Query: 182 QGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTP--IMGNALLDMYCKCGC 239
+ PD T+VS LS+C L ++G E+ + + F P + NA + MY +CG
Sbjct: 250 SS-GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGN 307
Query: 240 LSEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQF 299
L++AR +FD MP K+++ WT+M+ Y G E LFD R I
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI------------- 354
Query: 300 NRFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQG-KWIHGYINENRITVDAVV 358
+PD + V +L+ C+ G ++G + E ++
Sbjct: 355 ------------------RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 359 ATALIEMYAKCGLIEKALEIFYELR-EKDAASWTSIICGLAMNGKINKALELFSQMISGG 417
+ L+++ + G +++A+E + E D A W +++ ++ ++ A F+++I
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE-- 454
Query: 418 AKPDDITFIGVLS 430
+P++I + ++S
Sbjct: 455 FEPNNIGYYVLMS 467
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,592,862
Number of Sequences: 539616
Number of extensions: 9653277
Number of successful extensions: 33685
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 22953
Number of HSP's gapped (non-prelim): 2608
length of query: 619
length of database: 191,569,459
effective HSP length: 124
effective length of query: 495
effective length of database: 124,657,075
effective search space: 61705252125
effective search space used: 61705252125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)