BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007082
(619 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356513289|ref|XP_003525346.1| PREDICTED: uncharacterized protein LOC100814174 [Glycine max]
Length = 589
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/607 (62%), Positives = 474/607 (78%), Gaps = 29/607 (4%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
+ ESELV CIEAAC+S ESV KWR Q RSL+RLP+HLADSLLR LI RRL++PSLLEVF
Sbjct: 2 KSESELVGFCIEAACESRESVDKWRMQSRSLDRLPSHLADSLLRRLIARRLLYPSLLEVF 61
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS 123
KH+AE +++RG+NSVDAEWMAYLGA+R+LR LN++DC RV++SALW +TGM+ L+ELDLS
Sbjct: 62 KHSAEEVDVRGDNSVDAEWMAYLGAYRHLRYLNLSDCHRVSTSALWPITGMSSLQELDLS 121
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
RC KV DAG+ H+LSI LE+L +SET +TA G+ LL+SL+NLS+LDLGGLPV D+ L S
Sbjct: 122 RCFKVNDAGINHILSIPNLERLRISETSVTAKGVKLLASLKNLSLLDLGGLPVDDVALTS 181
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 243
LQVL +L Y+DLWGS++SN+GA+VL FP+L++LNLAWT VTKLP +S LE LN+SNCTI
Sbjct: 182 LQVLKRLHYIDLWGSKISNKGASVLNTFPKLTYLNLAWTSVTKLPKLSFLEYLNMSNCTI 241
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
DSILE ++KAPLAK+ L+G F+NE EA LY T+ LSFLDV+NSS RF FL++MK +
Sbjct: 242 DSILE--DDKAPLAKLILSGAMFMNEAEALLYANTNFLSFLDVANSSFHRFFFLSKMKVI 299
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
EHL+LSS M+GDDSVEMVAC G NL++LNLS TR SSAG+GILAGH+P+LEILSLS T +
Sbjct: 300 EHLNLSSCMMGDDSVEMVACAGGNLKSLNLSGTRVSSAGLGILAGHVPHLEILSLSQTPV 359
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
DD AIS++SMMPSLK +D+SNT+IKGF+ Q + + +LSL ALQNL LERLNLE TQV
Sbjct: 360 DDTAISFISMMPSLKDVDLSNTNIKGFLHQGRTDVNSLLSLMALQNLK-LERLNLEHTQV 418
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 483
D L+PLS+F+EL +LSL++ASL D+SL+ LSS+ KLTNLSI DAVLTN GL FK P
Sbjct: 419 RDEALYPLSSFQELRYLSLKSASLADISLYYLSSIPKLTNLSICDAVLTNYGLDMFKAPE 478
Query: 484 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLV 543
+LKLLDL G WLLTED IL FC+ HP++EV HEL + P +Q G N SPSR++ + +
Sbjct: 479 TLKLLDLKGCWLLTEDTILSFCRNHPQVEVRHELGTLFPVNQNGLNHSSPSRSTSKTMQM 538
Query: 544 KQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSLS 603
+K+D +P+S F+ DQRLKYSR+ELL LQ++SL
Sbjct: 539 TKKKDQIPLSPYFV--------------------------DQRLKYSRDELLALQFTSLP 572
Query: 604 LARPDDS 610
LA +S
Sbjct: 573 LASSSES 579
>gi|225426352|ref|XP_002266070.1| PREDICTED: uncharacterized protein LOC100261612 [Vitis vinifera]
Length = 598
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/604 (61%), Positives = 466/604 (77%), Gaps = 22/604 (3%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV LCIEAA QS ++V+KWRRQRR+L+R+P+HLA++LL LIRRR++ PSLLEVFK
Sbjct: 9 ETRLVCLCIEAASQSRDAVEKWRRQRRTLQRMPSHLAEALLHRLIRRRILNPSLLEVFKF 68
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRGE+SVDAEWMAY+G F L SLN+ADC+R+T+SALW + GM LKELDLSRC
Sbjct: 69 SVEKIDLRGESSVDAEWMAYIGGFCCLCSLNIADCQRITNSALWPIIGMPNLKELDLSRC 128
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+K +D+G++HL+SI TL+KL +SETG+TADGI L+SSL NLSVLDLGGLPVTDLVL SLQ
Sbjct: 129 IKFSDSGLRHLISIRTLQKLCISETGVTADGINLVSSLTNLSVLDLGGLPVTDLVLSSLQ 188
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
VLTKL+YLDLWGS++SN+GAA L +FP+LSFLN+AWT VT LP++ S+ CLN+SNCTI S
Sbjct: 189 VLTKLQYLDLWGSKISNKGAADLVVFPKLSFLNIAWTDVTTLPDLPSIACLNMSNCTIHS 248
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+ EG KA L KI+++G TF+N EAFL+IETS LSFLDVS SSL+ FCFL+ MKALEH
Sbjct: 249 MFEGEGAKALLEKITVSGATFLNVSEAFLFIETSFLSFLDVSRSSLNSFCFLSCMKALEH 308
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLS +M+GDDS++++AC+GANLRNLNLSNTR SSAGV ILAG +PNLE +SLS T +DD
Sbjct: 309 LDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGVSILAGCVPNLETISLSHTPVDD 368
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV--LSLTALQNLNHLERLNLEQTQV 423
AISY+SMM S+K I++SNT++KG I ++++LV LSL AL +LN+++RL+LE TQV
Sbjct: 369 VAISYISMMSSVKIINLSNTNVKGLIW---SDSELVWELSLAALHSLNYVKRLDLEGTQV 425
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 483
D L PL F++L LSL+ LTD+SL+QLSSL L NLSI D VLTN GL SFKPP
Sbjct: 426 EDEALCPLLRFQQLNELSLKGTRLTDLSLYQLSSLPNLINLSIGDTVLTNGGLNSFKPPA 485
Query: 484 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLV 543
+LKLLDL G WLLTEDAIL F K P+IEV HEL I PS+Q SN SPS+
Sbjct: 486 TLKLLDLRGCWLLTEDAILSFHKNDPQIEVRHELVHITPSEQNASNRSSPSQKG------ 539
Query: 544 KQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSLS 603
+KQ +P S S + M + F + QR KYSREELL +++S+L+
Sbjct: 540 -KKQQKLPKSQSRSKEETVIGMEFPF----------LESSYQRWKYSREELLAMEHSTLA 588
Query: 604 LARP 607
L P
Sbjct: 589 LNFP 592
>gi|297742329|emb|CBI34478.3| unnamed protein product [Vitis vinifera]
Length = 588
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/604 (61%), Positives = 465/604 (76%), Gaps = 32/604 (5%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV LCIEAA QS ++V+KWRRQRR+L+R+P+HLA++LL LIRRR++ PSLLEVFK
Sbjct: 9 ETRLVCLCIEAASQSRDAVEKWRRQRRTLQRMPSHLAEALLHRLIRRRILNPSLLEVFKF 68
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRGE+SVDAEWMAY+G F L SLN+ADC+R+T+SALW + GM LKELDLSRC
Sbjct: 69 SVEKIDLRGESSVDAEWMAYIGGFCCLCSLNIADCQRITNSALWPIIGMPNLKELDLSRC 128
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+K +D+G++HL+SI TL+KL +SETG+TADGI L+SSL NLSVLDLGGLPVTDLVL SLQ
Sbjct: 129 IKFSDSGLRHLISIRTLQKLCISETGVTADGINLVSSLTNLSVLDLGGLPVTDLVLSSLQ 188
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
VLTKL+YLDLWGS++SN+GAA L +FP+LSFLN+AWT VT LP++ S+ CLN+SNCTI S
Sbjct: 189 VLTKLQYLDLWGSKISNKGAADLVVFPKLSFLNIAWTDVTTLPDLPSIACLNMSNCTIHS 248
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+ EG KA L KI+++G TF+N EAFL+IETS LSFLDVS SSL+ FCFL+ MKALEH
Sbjct: 249 MFEGEGAKALLEKITVSGATFLNVSEAFLFIETSFLSFLDVSRSSLNSFCFLSCMKALEH 308
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLS +M+GDDS++++AC+GANLRNLNLSNTR SSAGV ILAG +PNLE +SLS T +DD
Sbjct: 309 LDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGVSILAGCVPNLETISLSHTPVDD 368
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV--LSLTALQNLNHLERLNLEQTQV 423
AISY+SMM S+K I++SNT++KG I ++++LV LSL AL +LN+++RL+LE TQV
Sbjct: 369 VAISYISMMSSVKIINLSNTNVKGLIW---SDSELVWELSLAALHSLNYVKRLDLEGTQV 425
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 483
D L PL F++L LSL+ LTD+SL+QLSSL L NLSI D VLTN GL SFKPP
Sbjct: 426 EDEALCPLLRFQQLNELSLKGTRLTDLSLYQLSSLPNLINLSIGDTVLTNGGLNSFKPPA 485
Query: 484 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLV 543
+LKLLDL G WLLTEDAIL F K P+IEV HEL I PS+Q SN SPS+
Sbjct: 486 TLKLLDLRGCWLLTEDAILSFHKNDPQIEVRHELVHITPSEQNASNRSSPSQKG------ 539
Query: 544 KQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSLS 603
+KQ +P S S R + + DQR KYSREELL +++S+L+
Sbjct: 540 -KKQQKLPKSQS----------RSKEETV----------IDQRWKYSREELLAMEHSTLA 578
Query: 604 LARP 607
L P
Sbjct: 579 LNFP 582
>gi|255537779|ref|XP_002509956.1| protein binding protein, putative [Ricinus communis]
gi|223549855|gb|EEF51343.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/600 (64%), Positives = 463/600 (77%), Gaps = 24/600 (4%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
E ES+LVRLCIEAAC+S ES+ KWRRQRR+LERLP+ LAD LLR L+ RRL+FPSLLEVF
Sbjct: 2 ETESQLVRLCIEAACESRESIDKWRRQRRTLERLPSPLADILLRRLLHRRLLFPSLLEVF 61
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS 123
K + E ++LRGEN+VDAEWMAYLGAFRYLR LN+ADC ++TSSALW+LTGMT LKELDLS
Sbjct: 62 KQSVEVVDLRGENAVDAEWMAYLGAFRYLRYLNLADCNKITSSALWSLTGMTSLKELDLS 121
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R VKVTDAG++HLLSIS+LE L + ETGLTA G+ALL+SL NLSVLDLGGLPVTD+ L S
Sbjct: 122 RSVKVTDAGIRHLLSISSLEILRIPETGLTAKGVALLTSLTNLSVLDLGGLPVTDMALSS 181
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 243
LQVLTKLEYLDLWGS +SN G AVL++FP+LSFLNL WT VT+LP++ SLE LNLSNCTI
Sbjct: 182 LQVLTKLEYLDLWGSNISNNGVAVLQLFPKLSFLNLGWTSVTRLPSMLSLEYLNLSNCTI 241
Query: 244 DSILE--GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+S+LE G+ +KAPL K+ L+G TF NE EAF IE LSFLDVSNSSL F FL MK
Sbjct: 242 ESLLEGDGDGDKAPLTKVILSGATFPNEAEAFYNIEPRFLSFLDVSNSSLQGFYFLHDMK 301
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
LEHLDLSS+M+GDD++E VAC+GANL NLNLS TR +SAG+ ILA H+P LE LSLS
Sbjct: 302 MLEHLDLSSTMMGDDAIEAVACIGANLTNLNLSKTRVTSAGLAILAEHVPKLEYLSLSHA 361
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+DD+A+SY+ MM SLK +D+SNT+IKGFI+Q+G ET+L+ SL ALQ L+ L+ LNLE T
Sbjct: 362 LVDDFALSYIGMMSSLKVVDLSNTNIKGFIRQMGVETNLIPSLKALQGLSGLQSLNLEHT 421
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 481
QV DA + P+S+F+EL HLSL++ASL D +L+ LSSLSKLT+L I DAVLTN GL F+P
Sbjct: 422 QVRDAAVAPVSSFQELSHLSLKSASLADETLYHLSSLSKLTSLVIGDAVLTNCGLDLFRP 481
Query: 482 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRAS 541
P +LK+LDL G WLLTE+AI FC HP I++ HEL + ++ S SPSR R
Sbjct: 482 PVALKMLDLRGCWLLTEEAISSFCTKHPAIKLRHELLNVSSPNESSSYRASPSRILSRPP 541
Query: 542 LVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSS 601
V +KQ MP+S + M F DQRLKYSREELL LQY S
Sbjct: 542 HVSRKQGKMPVS---------WPMPQHF-------------IDQRLKYSREELLALQYQS 579
>gi|449464060|ref|XP_004149747.1| PREDICTED: uncharacterized protein LOC101203036 [Cucumis sativus]
gi|449505065|ref|XP_004162366.1| PREDICTED: uncharacterized protein LOC101225004 [Cucumis sativus]
Length = 586
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 344/616 (55%), Positives = 436/616 (70%), Gaps = 40/616 (6%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV LCI +AC+S +SV+KWRRQ+R+LERLP+HLAD+LLR L RRL++PSLLEVFK+
Sbjct: 2 ENRLVELCINSACRSKDSVEKWRRQKRTLERLPSHLADALLRRLHARRLLYPSLLEVFKY 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
E ++L GEN+VD+EWMAYLG+FRYL+SLNV++C R++SS +W ++GMT L+EL++SRC
Sbjct: 62 TIEVVDLSGENAVDSEWMAYLGSFRYLQSLNVSNCHRLSSSGVWTISGMTTLRELNVSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+KVTDAG++HLLSI TLEKL ++ETG+TA G+ LLSSL+ L LDLGGLPVTD L SLQ
Sbjct: 122 LKVTDAGIRHLLSIPTLEKLCIAETGITAHGVTLLSSLKTLVFLDLGGLPVTDQALSSLQ 181
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
VLTKL+YLDLWGS++SN G+ VL+MFP+LSFLN+AWT VTK PN+ LECLN+SNC IDS
Sbjct: 182 VLTKLQYLDLWGSKISNSGSDVLQMFPKLSFLNIAWTSVTKFPNLPHLECLNMSNCIIDS 241
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+G K P K+ +G TF NE E ++ L +LD SN+SL RFCFL++MKA+EH
Sbjct: 242 TLKGLGAKVPPRKLIASGATFSNETEDLGFVAMDALYYLDFSNASLHRFCFLSRMKAVEH 301
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLSS+ IGD SVE++A VG NL+ LNLS T SS+G+G LAG + NLE LSLS T +DD
Sbjct: 302 LDLSSTTIGDSSVELIASVGENLKYLNLSCTAVSSSGIGSLAGKVSNLETLSLSHTMVDD 361
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
A+SYM+MMPSLK ID+S TDIKG+I ET V SLT LQNL+ LE LNLE T V D
Sbjct: 362 VALSYMNMMPSLKCIDLSETDIKGYIHLSAPETVKVFSLTELQNLDCLEMLNLEHTHVDD 421
Query: 426 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 485
+L PLS F++L HL LR+ S TD L LS L L LSIRDAVLTN +FKP +L
Sbjct: 422 ESLRPLSRFRKLSHLMLRSPSFTDTVLSYLSILPNLKTLSIRDAVLTNQAFDTFKPVATL 481
Query: 486 KLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPS----PSRTSLRAS 541
+ +DL G WLLTED + F + P+I+V HEL S+ ++ PS P + L +
Sbjct: 482 QKIDLRGCWLLTEDGLSVFHRRFPQIDVRHELFHFS-SNPTSTDQPSTHFIPKKIQLNQT 540
Query: 542 LVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSS 601
+ MP ++FV DQRLKYS+EELL LQ+SS
Sbjct: 541 ---SRSTGMP-----------------------SYFV-----DQRLKYSKEELLALQFSS 569
Query: 602 LSLARPDDSSTQDAMG 617
L P S++ MG
Sbjct: 570 L----PHGSTSVPEMG 581
>gi|297803756|ref|XP_002869762.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
gi|297315598|gb|EFH46021.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 315/607 (51%), Positives = 406/607 (66%), Gaps = 39/607 (6%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLCIE AC+SG++V++WR QRRSLERLP HLAD+LLR L+ +RL+FPSLLE FKH
Sbjct: 2 ESPLVRLCIEEACKSGDAVERWRLQRRSLERLPPHLADALLRRLLHKRLLFPSLLEGFKH 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRGE+S++AEWMAY+G F L SLN++DC+R+ SS LW +TG+T L ELDLSRC
Sbjct: 62 SVENIDLRGESSINAEWMAYIGGFVNLVSLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAG+KHL S+ L+KLW+S+TG+T GI+LL+SLQ LS+LDLGGLPVTD L +LQ
Sbjct: 122 FKVTDAGIKHLQSVVNLKKLWISQTGVTKVGISLLASLQKLSLLDLGGLPVTDHNLIALQ 181
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
LTKLEYLD+WGS V+N+GA + F LSFLNL+WT VT+ PNI LECL+++ CTI S
Sbjct: 182 ELTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQTPNIPHLECLHMNMCTIVS 241
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+ + + A L K+ L+G F E EA + S +++LDVS +SL F F+ M LEH
Sbjct: 242 EPKTHCSLASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTSLQNFSFIETMINLEH 301
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLSS+ GDDSV VACVG NL+NLN+S+T+ +SAGVG LAGH+P LE SLS T +DD
Sbjct: 302 LDLSSTAFGDDSVGFVACVGENLKNLNVSDTKITSAGVGNLAGHVPQLETFSLSQTFVDD 361
Query: 366 YAISYMS-MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
+I +S MMP +K +D+ T I+ E SL ALQ+L L+ L+LE +
Sbjct: 362 LSILLISTMMPCVKALDLGMTSIR--------EEQAEPSLAALQSLTSLKTLSLEHPYLG 413
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
D L LS+ L HLSLR+ SLTD +LH LSSL L +L +RDAVLT++GL F+PP+
Sbjct: 414 DTALSALSSLTGLTHLSLRSTSLTDSTLHHLSSLPNLVSLGVRDAVLTSNGLEKFRPPKR 473
Query: 485 LKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQ----IGSNGPSPSRTSLRA 540
L+ LDL G WLLT+D I CK +P I+V HE DQ S+ P R
Sbjct: 474 LRTLDLKGCWLLTKDDIAGLCKRYPHIKVRHEHDDSSSLDQNQFLPRSSTPQSFGKVPRR 533
Query: 541 SLVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYS 600
S ++ + + + SFL DQR+KY+REEL+ LQ S
Sbjct: 534 SNNQRPESSVAVPRSFL--------------------------DQRVKYNREELVALQNS 567
Query: 601 SLSLARP 607
LS P
Sbjct: 568 PLSQLLP 574
>gi|186701224|gb|ACC91251.1| leucine-rich repeat family protein [Arabidopsis halleri]
Length = 600
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 321/608 (52%), Positives = 412/608 (67%), Gaps = 27/608 (4%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLCIE AC+SG +V++WR QRRSLERLP HLAD+LLR L+ +RL+FPSLLE FKH
Sbjct: 2 ESALVRLCIEEACKSGYAVERWRLQRRSLERLPPHLADALLRRLLHKRLLFPSLLEGFKH 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRGE+S++AEWMAY+G F L SLN++DC+R+ SS LW +TG+T L ELDLSRC
Sbjct: 62 SVENIDLRGESSINAEWMAYIGGFVNLISLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAG+KHL S+S L+KLW+S+TG+T GI+LL+SL+ LS+LDLGGLPVTD L +LQ
Sbjct: 122 WKVTDAGIKHLQSVSNLKKLWISQTGVTKVGISLLASLKKLSLLDLGGLPVTDHNLIALQ 181
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
LTKLEYLD+WGS V+N+GA + F LSFLNL+WT VT+ PNI LECL+++ CTI S
Sbjct: 182 ALTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQTPNIPHLECLHMNMCTIVS 241
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+ + + A L K+ L+G F E EA + S +++LDVS +SL F FL M LEH
Sbjct: 242 EPKTHSSLASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTSLQNFSFLETMINLEH 301
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLSS+ GDDSV VACVG NLRNLN+S T+ +SAGVG LAGH+P LE SLS T +DD
Sbjct: 302 LDLSSTAFGDDSVGFVACVGENLRNLNVSETKITSAGVGNLAGHVPQLETFSLSQTFVDD 361
Query: 366 YAISYMS-MMPSLKFIDISNTDIKGFI-QQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
+I +S MMP +K +D+ T I+GFI QQ E SL ALQ+L L+ L+LE +
Sbjct: 362 LSILLISTMMPCVKALDLGMTSIRGFILQQSPQEEQAEPSLAALQSLTSLKTLSLEHPYL 421
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 483
D L LS+ L HLSLR+ SLTD +LH LSSL L +L +RDAVLT++GL F+PP+
Sbjct: 422 GDTALSALSSLTGLTHLSLRSTSLTDSTLHHLSSLPNLVSLGVRDAVLTSNGLEKFRPPK 481
Query: 484 SLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHE--LSVICPSDQIGSNGPSPSRTSLRAS 541
L+ LDL G WLLT+D I CK +P I+V HE +S +Q+ +P S
Sbjct: 482 RLRTLDLKGCWLLTKDDIAGLCKRYPHIKVRHEHDISSSLDQNQLLPRSSTPQTQSFGKL 541
Query: 542 LVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSS 601
+ Q P S+ + +F DQR+KY+REEL+ LQ S
Sbjct: 542 PRRNNQRP-----------------ESYVAVPRSFL------DQRVKYNREELVALQKSP 578
Query: 602 LSLARPDD 609
LS P +
Sbjct: 579 LSQLLPRE 586
>gi|42567079|ref|NP_194115.3| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|20466546|gb|AAM20590.1| unknown protein [Arabidopsis thaliana]
gi|22136448|gb|AAM91302.1| unknown protein [Arabidopsis thaliana]
gi|51971383|dbj|BAD44356.1| putative protein [Arabidopsis thaliana]
gi|332659411|gb|AEE84811.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 307/604 (50%), Positives = 404/604 (66%), Gaps = 26/604 (4%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLC++ AC+SG++V++WR QRRSLE LP HLAD+LLR L+++RL+FPSLLE FK+
Sbjct: 2 ESPLVRLCLKEACKSGDAVERWRLQRRSLESLPPHLADALLRRLLKKRLLFPSLLEGFKY 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRG++SV+AEWMAY+G F L +LN++DC+R+ SS LW +TG+T L ELDLSRC
Sbjct: 62 SVENIDLRGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAGMKHL S+ L+KLW+S+TG+T GI+LL+SL+ LS+LDLGGLPVTD L SLQ
Sbjct: 122 FKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQ 181
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
LTKLEYLD+WGS V+N+GA + F LSFLNL+WT +T+ PNI LECL+++ CTI S
Sbjct: 182 ALTKLEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQTPNIPHLECLHMNTCTIVS 241
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+ + + A L K+ L+G F E E+ + S +++LDVS +SL F FL M LEH
Sbjct: 242 EPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFLETMFNLEH 301
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLSS+ GDDSV VACVG NL+NLN+S+T+ + +GVG LAGH+P LE LS+S T +DD
Sbjct: 302 LDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNLAGHVPQLETLSMSQTFVDD 361
Query: 366 YAISYMSM-MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
+I +S MP +K +D+ GF + + + SL ALQ+L LE L+LE +
Sbjct: 362 LSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETLSLEHPYLG 421
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
D L LS+ L HLSL + SLTD +LH LSSL L +L +RD VLT++GL F+PP
Sbjct: 422 DKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPNLVSLGVRDGVLTSNGLEKFRPPNR 481
Query: 485 LKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSP-SRTSLRASLV 543
L+ LDL G WLLT+D I CK +P I+V HE + DQ N P S T V
Sbjct: 482 LRTLDLQGCWLLTKDDIAGLCKRYPHIKVRHEHADSSSLDQ---NQLLPRSSTPQSFGKV 538
Query: 544 KQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSLS 603
++ + P S + V S DQR+KY+REEL+ LQ S LS
Sbjct: 539 ARRNNQRPES---------------------SVAVPRSFLDQRVKYNREELVALQNSPLS 577
Query: 604 LARP 607
P
Sbjct: 578 QLLP 581
>gi|326513166|dbj|BAK06823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 298/596 (50%), Positives = 409/596 (68%), Gaps = 29/596 (4%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E L+ CI+AA + SV+ WRRQRRSLERLP+ LAD+LLR L RRL+FPSLLEVF+H
Sbjct: 36 EQRLLDRCIDAAARCPASVEAWRRQRRSLERLPSQLADALLRRLAARRLLFPSLLEVFRH 95
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ + I+L G+ +VDAEW+AYLG+FRYL L +ADC++V SA+W L+GM+ LKELDLSRC
Sbjct: 96 SVQEIDLSGDIAVDAEWLAYLGSFRYLGVLKLADCKKVDHSAIWPLSGMSMLKELDLSRC 155
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
K+TDAG+KH++SI +LEKL LSETGLT +G+ L+S+L+ L +LDLGG+ +TD LRSLQ
Sbjct: 156 SKITDAGIKHIVSIDSLEKLHLSETGLTDNGVMLISALKGLILLDLGGIHMTDKALRSLQ 215
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
VLT+LE+LD+WGS++++ GA++L+ F L FLN++WT VT+LP++ +++ LN+SNCTI S
Sbjct: 216 VLTQLEHLDVWGSEITDEGASILEAFTGLRFLNVSWTHVTRLPHLPNMKYLNMSNCTIYS 275
Query: 246 ILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
I G+ E PL K + + +F + E F I S SFLD+S SLS L +MK+LE
Sbjct: 276 ICGGDSEVHIPLQKFTASAASFGDIDEVFSSIVASSFSFLDMSGCSLSNLYGLQKMKSLE 335
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
HLD+S + + DD+VE VA +G LR L+L NT +S + ILAG +PNL LSL+ T+ID
Sbjct: 336 HLDISLNRVTDDAVEYVANIGMKLRYLSLKNTGITSQALCILAGTVPNLASLSLAYTKID 395
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
D A+ Y+SMMPSL+ ID+S+T IKGF +V A ++ + SL L++L +LE LNLE +S
Sbjct: 396 DSALVYISMMPSLRVIDLSHTTIKGFT-RVEANSEKIPSLPLLEHLIYLESLNLEDAPLS 454
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
D + P+++F+ L +L L++ L+D LH LSS S L +L +VL+NSGL F PP
Sbjct: 455 DEVIPPMTSFRALKYLYLKSDFLSDPGLHALSSASNLIHLGFCGSVLSNSGLLEFVPPAQ 514
Query: 485 LKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRA--SL 542
L +LDL G W+LT DAI F + HP IEV HEL+ ++ G++ SR RA +
Sbjct: 515 LHVLDLSGCWILTGDAISTFRRHHPSIEVRHELTQELQPNRGGTSQVHKSRQLPRAKTKV 574
Query: 543 VKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQ 598
V D S R+S FFV DQR+KYSREE++E+Q
Sbjct: 575 VNSSAD---------------SRRHSG-----IFFV-----DQRIKYSREEMMEIQ 605
>gi|218196286|gb|EEC78713.1| hypothetical protein OsI_18882 [Oryza sativa Indica Group]
Length = 601
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 297/599 (49%), Positives = 403/599 (67%), Gaps = 26/599 (4%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV CI+AA +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF+H
Sbjct: 11 ETPLVDRCIDAAAGGAATVEAWRRQRRSLERLPAQLADALLRRLAARRLLFPSLLEVFQH 70
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+L G +VDAEW+AYLGAFRYLR L +ADC+ V SSA+WAL+GM+ LKELDLSRC
Sbjct: 71 SVEEIDLSGHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGMSTLKELDLSRC 130
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG+ TD LRSLQ
Sbjct: 131 SKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDKALRSLQ 190
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
VLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L CLN+SNCTI S
Sbjct: 191 VLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILLTLRCLNMSNCTIHS 250
Query: 246 ILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
I G + L K+ ++ +F N E F I S L++LD+S+ S S FL M+ LE
Sbjct: 251 ICNGEFQVLIHLEKLVISAASFGNIDEVFSSILPSSLTYLDMSSCSSSNLYFLGNMRNLE 310
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
HLDLS S I D++E +A +G NL L+LSN+ +S + +LAG +P+L LSL+ T+ID
Sbjct: 311 HLDLSYSRIISDAIEYIANIGMNLMFLSLSNSEVTSQALCVLAGTVPSLTTLSLAHTKID 370
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
D A+ Y+SMMPSL+ +++S T IKGF+ + + VLSL+AL+ L +LE LNL TQ+
Sbjct: 371 DSALLYISMMPSLRILNLSRTCIKGFMMENSVK---VLSLSALEELKYLESLNLNNTQLM 427
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
D + PL++F+ L +L L++ L+D +LH LSS S L +L +L+ +GL F PP +
Sbjct: 428 DDVIPPLASFRALKYLFLKSDFLSDPALHALSSASNLIHLGFCGNILSTTGLRKFVPPAT 487
Query: 485 LKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVK 544
L++LDL G W+LT DAI FC HP IEV HEL Q G S S R +
Sbjct: 488 LRMLDLSGCWILTGDAISAFCTCHPVIEVRHEL---IQELQANYGGTSHLHKSSR----Q 540
Query: 545 QKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSLS 603
+Q ++ S G L +CF D+++KYS+EE++ELQ+ + S
Sbjct: 541 PQQVKAKVAKSLAGPSRLAD-------------ICF--VDEKIKYSKEEMMELQHQAKS 584
>gi|242089917|ref|XP_002440791.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
gi|241946076|gb|EES19221.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
Length = 608
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 280/609 (45%), Positives = 388/609 (63%), Gaps = 37/609 (6%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
+ LV CI+AA + +V+ WRRQRRSLERLPA LAD+L R L RRL+FPSLLEVF +
Sbjct: 14 ARLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALFRRLAARRLLFPSLLEVFSRS 73
Query: 67 AEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
E ++L G SVDAEW+AYLG+FR+LR L +ADC+ + + A+W+L+GM LK+LDLSRC
Sbjct: 74 VEEVDLSGFLSVDAEWLAYLGSFRFLRVLTLADCKNIDNDAVWSLSGMNTLKDLDLSRCK 133
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K++DAG+KH+++I +LEKL LSET LT +G+ L+SSL NLS LDLGG+ +TD L+SLQV
Sbjct: 134 KISDAGIKHIVTIESLEKLHLSETELTNNGVMLISSLTNLSFLDLGGILMTDKSLQSLQV 193
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LT+LE+LD+WGS+ +N GA+ LK F RL FLNLA T V L + CLN+SNC I SI
Sbjct: 194 LTRLEHLDIWGSETTNEGASTLKSFARLIFLNLALTRVNHLSIPPTTRCLNMSNCEIHSI 253
Query: 247 L-EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
E +E PL ++ TF N + F I+ S L+ LD+S+ LS FL +MK LEH
Sbjct: 254 CDEDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLTHLDLSSCKLSNLSFLEKMKNLEH 313
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLS ++I D ++E +A +G NL+ L+L NT +S + ILAG +PNL LSL+ T+IDD
Sbjct: 314 LDLSYNIITDGAIEHIAKLGTNLQYLSLKNTGITSQALCILAGTVPNLTSLSLANTKIDD 373
Query: 366 YAISYMSMMPSLKFIDISNTDIKG------FIQQVGAETDLVLSLTALQNLNHLERLNLE 419
A++Y+ M+P L+ ID+S T IKG F G ++A ++L +LE LNLE
Sbjct: 374 SALAYIGMIPLLRTIDLSQTSIKGCALENKFYLMAG-----FTHMSAFEHLKYLESLNLE 428
Query: 420 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
T +S + PL++ L +L L++ L+D +LH LS+ S L +L +L++SGL F
Sbjct: 429 DTPLSAEVIPPLASLAALKYLYLKSDFLSDPALHALSAASNLIHLGFCGNILSSSGLLQF 488
Query: 480 KPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLR 539
PP +L +LDL G W+LT +AI F K HP IE+ HEL ++ +G
Sbjct: 489 VPPTTLCVLDLSGCWILTGEAISTFRKRHPTIELRHELMEEVQANFVGG----------- 537
Query: 540 ASLVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQY 599
+ K ++ P S +G SF +CF D+R+KYS+EE +ELQ
Sbjct: 538 SQFRKPRRRQSPHVKSEVGN--------SFAGPSRLRDICF--VDERIKYSKEEFMELQ- 586
Query: 600 SSLSLARPD 608
L +P+
Sbjct: 587 ---GLVKPN 592
>gi|413949465|gb|AFW82114.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 606
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 290/605 (47%), Positives = 398/605 (65%), Gaps = 31/605 (5%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
S LV CI+AA + +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF +
Sbjct: 14 SRLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALLRRLAARRLLFPSLLEVFGRS 73
Query: 67 AEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
E ++L G SV++EW+AYLG+FRYLR L +ADC+ + + A+W+L+GM LKELDLSRC
Sbjct: 74 VEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSGMNTLKELDLSRCK 133
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K++DAG+KH+++I +LEKL LSET LT +G+ L+SSL NLS LDLGG+ +TD L+SLQV
Sbjct: 134 KISDAGIKHIVTIESLEKLHLSETELTDNGVMLISSLTNLSFLDLGGILMTDKTLQSLQV 193
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LTKLE+LD+WGS+ +N GA+ LK F RL LNLA T V L + LN+SNC I SI
Sbjct: 194 LTKLEHLDIWGSETTNEGASALKSFARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIHSI 253
Query: 247 LE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+ +E PL ++ TF N + F I+ S L LD+S+ LS FL +MK LEH
Sbjct: 254 CDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLSNLSFLEKMKNLEH 313
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLS ++I D ++E +A +G NL+ L+L NT +S + ILAG +PNL LSL+ T+IDD
Sbjct: 314 LDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPNLTSLSLANTKIDD 373
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQ-QVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
A++Y+ M+P L+ ID+S T IKGFI +V +E +LS++A ++L +LE LNLE T +S
Sbjct: 374 SALAYIGMIPLLRTIDLSQTSIKGFIHTEVNSEK--LLSMSAFEHLKYLESLNLEDTPLS 431
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
+ PL++F L +L L++ L+D +LH LS+ S L +L R +L++ GL F PP +
Sbjct: 432 AEVIPPLASFATLKYLYLKSDFLSDPALHALSAASNLIHLGFRGNILSSFGLLQFVPPVT 491
Query: 485 LKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI-GSNGPSPSRTSLRASLV 543
L +LDL G W+LT DAI F K HP IE+ HEL + + GS P R R+ V
Sbjct: 492 LCVLDLSGCWILTGDAISTFRKRHPTIELRHELLHEVEENFVGGSQFRKPRRR--RSPHV 549
Query: 544 KQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSLS 603
K + + +SF G L +R+ D+R+KYS+EE +ELQ
Sbjct: 550 KAE-----VGNSFAGSSRLHDIRF---------------VDERIKYSKEEFVELQ----G 585
Query: 604 LARPD 608
LA+P+
Sbjct: 586 LAKPN 590
>gi|357134265|ref|XP_003568738.1| PREDICTED: uncharacterized protein LOC100844673 [Brachypodium
distachyon]
Length = 547
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 259/595 (43%), Positives = 357/595 (60%), Gaps = 82/595 (13%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV CI+AA + +V WRRQRRSLERLP LAD+LL+ L RRL+ PSLLEVF+H
Sbjct: 13 ETRLVDRCIDAAARGPATVDAWRRQRRSLERLPGQLADALLQRLAARRLLSPSLLEVFRH 72
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+L G +VDAEW+AYLG+FRYL + L L+ C
Sbjct: 73 SVEEIDLSGNIAVDAEWLAYLGSFRYL-------------------------RVLKLADC 107
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
V ++ + W ++ DLGG+ +TD LRSLQ
Sbjct: 108 KNVNNSAV------------W--------------------ALSDLGGIHMTDKTLRSLQ 135
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
VLT+LE+LD+WGS+++N GA+VLK F RLSFLN++WT VT+LP + +L+ LN+SNCTI S
Sbjct: 136 VLTRLEHLDIWGSEITNEGASVLKAFTRLSFLNVSWTHVTRLPPLPNLQHLNMSNCTIHS 195
Query: 246 ILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
I +G+ E PL K ++ +F N E F I+ S L +LD+S SLS +MK +E
Sbjct: 196 IRDGDSEVNVPLEKFTVCAASFGNIFEVFSSIQGSSLLYLDMSGCSLSNLHIFEKMKHIE 255
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
HLDLS S I D +++ VA +G NLR+L+L NT +S ILAG +PNL LSL+ T+ID
Sbjct: 256 HLDLSFSRITDAAIQHVANIGMNLRHLSLKNTGITSQAPCILAGTVPNLSSLSLAYTEID 315
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
D A++Y+SMMPSL+ ID+S+T IKGF V ++ + S+ L++L +LE LNLE T +S
Sbjct: 316 DSALAYISMMPSLRVIDLSHTSIKGFT-CVEVNSEKIPSMPPLEHLMYLESLNLEDTALS 374
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
D + PL++F+ + +L L++ L+D +LH LSS S LT+L +L++SGL F PP
Sbjct: 375 DEVIPPLASFRAIKYLYLKSDFLSDPALHALSSASNLTHLGFCGNILSDSGLLQFVPPAK 434
Query: 485 LKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVK 544
L++LDL G W+LT DA+ FCK HP IEV HEL + G++ SR +A
Sbjct: 435 LRVLDLSGCWILTGDAVSTFCKHHPVIEVTHELWQELQPNSGGTSQVHKSRQLPKAKTEA 494
Query: 545 QKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQY 599
+ P S L G+ FFV D+R+KYSREEL+ELQ+
Sbjct: 495 VNRQAGP---SRLSGI---------------FFV-----DERIKYSREELMELQH 526
>gi|215769345|dbj|BAH01574.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 317/494 (64%), Gaps = 32/494 (6%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M LKELDLSRC K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG
Sbjct: 1 MRTLKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGG 60
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
+ TD LRSLQVLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L
Sbjct: 61 VRFTDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTL 120
Query: 234 ECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
CLN+SNCTI SI G + L K+ ++ +F N E F I S L++LD+S+ S S
Sbjct: 121 RCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSS 180
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
FL M+ LEHLDLS S I D++E +A +G NL+ L+LSN+ +S + +LAG +P+
Sbjct: 181 NLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPS 240
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
L LSL+ T+IDD A+ Y+SMMPSL+ +++S T IKGF+ + + VLSL+AL+ L +
Sbjct: 241 LTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKGFMMENSVK---VLSLSALEELKY 297
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
LE LNL TQ+ D + PL++ + L +L L++ L+D +LH LSS S L +L +L+
Sbjct: 298 LESLNLNNTQLMDDVIPPLASLRALKYLFLKSDFLSDPALHALSSASNLIHLGFCGNILS 357
Query: 473 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS---N 529
+GL F PP +L++LDL G W+LT DAI FC HP IEV HEL ++ G+ +
Sbjct: 358 TTGLRKFVPPATLRMLDLSGCWILTGDAISAFCTCHPVIEVRHELIQELQANYGGTSHLH 417
Query: 530 GPSPSRTSLRASLVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKY 589
S ++A + K P ++ +CF D+R+KY
Sbjct: 418 KSSRQPQQVKAKVAKSSAGPSRLAE-----------------------ICF--VDERIKY 452
Query: 590 SREELLELQYSSLS 603
S+EE++ELQ+ + S
Sbjct: 453 SKEEMMELQHQAKS 466
>gi|302802011|ref|XP_002982761.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
gi|300149351|gb|EFJ16006.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
Length = 516
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 229/519 (44%), Positives = 324/519 (62%), Gaps = 14/519 (2%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
LV LC+EAA +S +SV+ WRRQRR+LE LPAHLA+SLL L+ + L P LLE+F+ + E
Sbjct: 1 LVDLCLEAASRSADSVRSWRRQRRTLEILPAHLAESLLHQLLVKNLFSPPLLELFQLSVE 60
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT--CLKELDLSRCV 126
++L GE SVDAEWMAY+G FR+LR L V C+ + +SA+W L+G + + RC
Sbjct: 61 ELDLNGELSVDAEWMAYIGGFRHLRVLKVESCKALNNSAIWHLSGKLHFSFERKLIDRCS 120
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K+T+ G++H+L++ L+ L LSETG+ GI L+ L+NLS LDLGGLPVTD + SL V
Sbjct: 121 KITNQGLEHILTLGKLKHLGLSETGIGEQGIGKLAVLRNLSHLDLGGLPVTDSHVSSLLV 180
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
L L L LWGS ++N GA +L+ FPRL LNLAWT V+ +P++ + LNLS+C + S+
Sbjct: 181 LQLLIDLQLWGSSITNEGANMLRGFPRLEILNLAWTKVSVVPSMPRVSQLNLSHCVVLSV 240
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
+E + L ++ L+G T + LS L++S ++L+ FL +K + L
Sbjct: 241 ---SEEGSALDQLRLSGATIQDPLRVLHSHSLPELSVLELSATNLAALTFLGSLKRVVKL 297
Query: 307 DLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
DLSS + D++ ++A NL++L+LS+TR S GV +L GH+P LE LSL GT I D
Sbjct: 298 DLSSMPSVSSDTMNLLAKCARNLKHLDLSDTRVGSEGVAVLTGHVPALEHLSLRGTSITD 357
Query: 366 YAISYMSMMPSLKFIDISNTDIKGF-------IQQVGAETDLVL-SLTALQNLNHLERLN 417
Y+ +MP L ID+SNT + G + A D S+ LQ L++L RL+
Sbjct: 358 SVFGYLGLMPLLIDIDLSNTSLTGMPVFEFTKVYYTCAPVDSSFWSVLHLQQLHNLRRLD 417
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 477
L +T+ SD + L+ L HL L LTD SLH+LS+L L +L+ + VLT++GL
Sbjct: 418 LRRTRFSDKSCKRLACLVRLTHLLLCAEFLTDASLHELSALPNLRSLAFQGTVLTDAGLR 477
Query: 478 SFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHE 516
S KPP L+ LDL WLLTE +LQFC + + V H+
Sbjct: 478 SLKPPPPLEELDLTDCWLLTEGCLLQFCDYYRSVTVKHD 516
>gi|168052598|ref|XP_001778727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669846|gb|EDQ56425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 643
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 214/512 (41%), Positives = 314/512 (61%), Gaps = 2/512 (0%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
L+ LCI+AA + V+ WR++RR+ E LP+ LA L L++ L+ +L+ +F+ N +
Sbjct: 14 LLELCIKAATRDKSCVKAWRQKRRTFEMLPSELAHELFNSLLQSHLLSATLIGLFQSNLQ 73
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+ L GE +VD EWMAYLG R+LR+L DC+ +T++A+ LTG+T ++ELDL+RC K+
Sbjct: 74 EVNLSGEATVDGEWMAYLGGCRHLRALRATDCKALTNNAIRQLTGLTAMEELDLARCRKI 133
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+D + H+LS L KL L+ETGLT G+ LL L L +LDLGG PVTD L S Q L
Sbjct: 134 SDDAVPHILSFKMLRKLGLAETGLTTKGLLLLPGLSRLVLLDLGGCPVTDADLISFQALG 193
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL- 247
LE+LDLWGS+V+N GA L F L +LNLA T VT +P ++SL LNL NC ++SI
Sbjct: 194 MLEHLDLWGSKVTNMGARCLSSFKTLKYLNLAMTAVTAIPQLNSLLSLNLCNCDVESIYG 253
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
+G + + L ++ L+G + ++ ++ T L LD+++S ++ + L LD
Sbjct: 254 DGTFSDSLLRELFLSGAS-LSLKDVISGSNTRNLHLLDLASSRVNDLDAFVHIPKLAILD 312
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
L ++ + ++ + +G NLR ++LS T+ S GVG +AGH PN+E LSL+ T +DD
Sbjct: 313 LRATGLTNELMLKFQGLGDNLRWIDLSYTKIDSEGVGAIAGHAPNVEQLSLNHTPVDDNV 372
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 427
Y+ P L+ +++ + + GF+ E + L+ L+ L HL RL++ T V DA
Sbjct: 373 FIYLVHFPVLQSLNLGGSKVNGFMTVGSEEFQQISVLSYLEQLQHLRRLDMRYTGVGDAA 432
Query: 428 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 487
L L +L HL + + SL+D L QLSS L L I A +T GL S+KPP L+
Sbjct: 433 LHGLKNLVQLSHLHIHSNSLSDECLQQLSSFPNLVCLGIGGATITADGLLSYKPPSLLEE 492
Query: 488 LDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 519
LDL WLLTE A+L FC+ HPRI VW+E +V
Sbjct: 493 LDLTDCWLLTEPALLDFCEAHPRIMVWNEKTV 524
>gi|222630606|gb|EEE62738.1| hypothetical protein OsJ_17541 [Oryza sativa Japonica Group]
Length = 973
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 243/330 (73%), Gaps = 1/330 (0%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKE 119
L VF+H+ E I+L G +VDAEW+AYLGAFRYLR L +ADC+ V SSA+WAL+GM LKE
Sbjct: 607 LRVFQHSVEEIDLSGHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGMRTLKE 666
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
LDLSRC K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG+ TD
Sbjct: 667 LDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGGVRFTDK 726
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
LRSLQVLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L CLN+S
Sbjct: 727 ALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTLRCLNMS 786
Query: 240 NCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 298
NCTI SI G + L K+ ++ +F N E F I S L++LD+S+ S S FL
Sbjct: 787 NCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSSNLYFLG 846
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
M+ LEHLDLS S I D++E +A +G NL+ L+LSN+ +S + +LAG +P+L LSL
Sbjct: 847 NMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPSLTTLSL 906
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIK 388
+ T+IDD A+ Y+SMMPSL+ +++S T IK
Sbjct: 907 AHTKIDDSALLYISMMPSLRILNLSRTCIK 936
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 164/357 (45%), Gaps = 60/357 (16%)
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRN 330
AF Y+ +L D N + S L+ M+ L+ LDLS S I D ++ +A + +L
Sbjct: 635 AFRYLR--VLKLADCKNVNSSAVWALSGMRTLKELDLSRCSKISDAGIKHIASI-ESLEK 691
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L++S T + GV ++ L NL +L L G + D A+ + ++ L+ +DI ++I
Sbjct: 692 LHVSQTGLTDNGVMAISS-LINLRLLDLGGVRFTDKALRSLQVLTQLEHLDIWGSEIT-- 748
Query: 391 IQQVGAETDLVLSLTALQNLN-HLERLN-------LEQTQVSDATLFPL--STFKELIHL 440
GA ++++ T+L LN R+ L +S+ T+ + F+ LIHL
Sbjct: 749 --NEGAS--VLIAFTSLSFLNISWTRVTCLPILPTLRCLNMSNCTIHSICNGEFQVLIHL 804
Query: 441 S---LRNASLTDVSLHQLSSL--SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ AS ++ SS+ S LT L + ++S L R+L+ LDL +
Sbjct: 805 EKLIISAASFGNID-EVFSSILPSSLTYLDMSSC--SSSNLYFLGNMRNLEHLDLSYSRI 861
Query: 496 LTEDAI---------LQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQK 546
++ DAI L+F + L V+ G PS T+L SL K
Sbjct: 862 IS-DAIEYIANIGMNLKFLSLSNSEVTSQALCVLA--------GTVPSLTTL--SLAHTK 910
Query: 547 QDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSLS 603
D + L SM S + ++L+ C D+R+KYS+EE++ELQ+ + S
Sbjct: 911 IDDSAL--------LYISMMPSLRILNLSR-TCIK--DERIKYSKEEMMELQHQAKS 956
>gi|148909462|gb|ABR17829.1| unknown [Picea sitchensis]
Length = 455
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 206/455 (45%), Positives = 287/455 (63%), Gaps = 20/455 (4%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+A LS L +L+ LDLGGLPVTDLV+ SLQ LT+L LD+WGS++SN GA +LK FP+L+
Sbjct: 1 MARLSVLTSLTSLDLGGLPVTDLVVSSLQALTQLHQLDMWGSKISNEGAILLKAFPKLNC 60
Query: 217 LNLAWTGVTKLPNISSLECLNLSNCTIDSILEG-NENKAPLAKISLAGTTFINEREAFLY 275
LNLAWT VT+LP + SL LN+S CTI+SIL+G E + L + +G +FI+
Sbjct: 61 LNLAWTNVTRLPALVSLTSLNMSKCTIESILDGLEEPEISLLTLHFSGASFIDAYRVLSC 120
Query: 276 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
+ L+FLD+S SS+ FL M LE LDLS + + D S+ VA +GANL++LNLS
Sbjct: 121 LHAQNLTFLDLSGSSIDNVSFLAGMNRLESLDLSCTGVIDSSMNSVADIGANLKHLNLST 180
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
TR +S + ILAG++P LE +SLS T +DD A++Y+ ++ +L+ I +S T+IKGFI
Sbjct: 181 TRVTSDALAILAGNVPKLEFISLSHTMVDDNALAYLGLISALRNISLSFTNIKGFIHVGE 240
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
+E++ SL +L+ L HLE L+LE T +SD PL KEL HLSLR+ L+D+SLH +
Sbjct: 241 SESNPQFSLASLRKLEHLEILDLENTHISDLACQPLIFLKELYHLSLRSDFLSDISLHTV 300
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
SSL KL LSI+ AV+T +GL SF PP L++LDL WLLT + IL+F K +P++++ H
Sbjct: 301 SSLPKLKYLSIQGAVVTKTGLCSFVPPPLLQVLDLSDCWLLTMEGILEFWKTYPQLQLRH 360
Query: 516 ELSVICPSDQIG-SNGPSPSRTSLRASLVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHL 574
EL V DQ S G S ++ A VKQ + + S L K I
Sbjct: 361 ELIVTIFEDQTHRSRGNMFSYETMEAFTVKQGRKSRSRASS----SSLHEKPTQRKFI-- 414
Query: 575 TFFVCFSKTDQRLKYSREELLELQ---YSSLSLAR 606
D+R+KYS+ ELL ++ +S+LS +
Sbjct: 415 ---------DERIKYSKSELLRIRAGVHSALSFSE 440
>gi|308044417|ref|NP_001183765.1| hypothetical protein [Zea mays]
gi|238014428|gb|ACR38249.1| unknown [Zea mays]
gi|413949466|gb|AFW82115.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 547
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 240/607 (39%), Positives = 343/607 (56%), Gaps = 94/607 (15%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
S LV CI+AA + +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF +
Sbjct: 14 SRLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALLRRLAARRLLFPSLLEVFGRS 73
Query: 67 AEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
E ++L G SV++EW+AYLG+FRYLR L +ADC+ + + A+W+L+G +
Sbjct: 74 VEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSG-----------GI 122
Query: 127 KVTDAGMKHLLSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+TD ++ L ++ LE L W SET T +G + L S L L+L
Sbjct: 123 LMTDKTLQSLQVLTKLEHLDIWGSET--TNEGASALKSFARLLSLNLA------------ 168
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 244
LT++ +L + P S+ LN+SNC I
Sbjct: 169 --LTRVNHLSIP---------------PTTSY-------------------LNMSNCEIH 192
Query: 245 SILE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
SI + +E PL ++ TF N + F I+ S L LD+S+ LS FL +MK L
Sbjct: 193 SICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLSNLSFLEKMKNL 252
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
EHLDLS ++I D ++E +A +G NL+ L+L NT +S + ILAG +PNL LSL+ T+I
Sbjct: 253 EHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPNLTSLSLANTKI 312
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQ-QVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
DD A++Y+ M+P L+ ID+S T IKGFI +V +E +LS++A ++L +LE LNLE T
Sbjct: 313 DDSALAYIGMIPLLRTIDLSQTSIKGFIHTEVNSEK--LLSMSAFEHLKYLESLNLEDTP 370
Query: 423 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 482
+S + PL++F L +L L++ L+D +LH LS+ S L +L R +L++ GL F PP
Sbjct: 371 LSAEVIPPLASFATLKYLYLKSDFLSDPALHALSAASNLIHLGFRGNILSSFGLLQFVPP 430
Query: 483 RSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI-GSNGPSPSRTSLRAS 541
+L +LDL G W+LT DAI F K HP IE+ HEL + + GS P R R+
Sbjct: 431 VTLCVLDLSGCWILTGDAISTFRKRHPTIELRHELLHEVEENFVGGSQFRKPRRR--RSP 488
Query: 542 LVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSS 601
VK + + +SF G L +R+ D+R+KYS+EE +ELQ
Sbjct: 489 HVKAE-----VGNSFAGSSRLHDIRF---------------VDERIKYSKEEFVELQ--- 525
Query: 602 LSLARPD 608
LA+P+
Sbjct: 526 -GLAKPN 531
>gi|224058283|ref|XP_002299476.1| predicted protein [Populus trichocarpa]
gi|222846734|gb|EEE84281.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/309 (55%), Positives = 208/309 (67%), Gaps = 27/309 (8%)
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
+E+LDLSSSMIGDDS+E VA +GA LRNLNL TR +SAGV IL GH+P LE LSLS T
Sbjct: 1 MEYLDLSSSMIGDDSIEAVASIGAILRNLNLGKTRVTSAGVAILVGHVPKLENLSLSHTL 60
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
+DD A+SY+ MMPSLK +D++NT I GFI Q GA +L+ SLTAL +L LE LNLE
Sbjct: 61 VDDLAMSYIGMMPSLKLVDLNNTIINGFIHQDGAGPNLISSLTALHSLKGLESLNLECAN 120
Query: 423 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 482
+ DA + PLS F+EL LSL++ SLTD+SL+ LSSL K+ NL IRDAVLT+SGL SF+PP
Sbjct: 121 IKDAAVDPLSNFQELRLLSLKSPSLTDISLYHLSSLPKIRNLGIRDAVLTDSGLFSFRPP 180
Query: 483 RSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASL 542
+L++LDL G WLLTEDAIL F K HP IE+ HE V+ SDQ + +P RT LR
Sbjct: 181 ATLEMLDLRGCWLLTEDAILSFRKRHPLIELRHE-HVVSTSDQTARHRLTPPRTFLRPPQ 239
Query: 543 VKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSL 602
V QKQ+ + +S F+ DQRLKY+REELL LQ+ S
Sbjct: 240 VNQKQEKLIVSQYFI--------------------------DQRLKYTREELLALQFQSS 273
Query: 603 SLARPDDSS 611
SL P D S
Sbjct: 274 SLGSPFDKS 282
>gi|224058291|ref|XP_002299477.1| predicted protein [Populus trichocarpa]
gi|222846735|gb|EEE84282.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/182 (71%), Positives = 156/182 (85%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLCIEAAC+S ESV+KWR+QRR+L +P+ LAD+LLR L RRL+FPSLLEVFK
Sbjct: 1 ESRLVRLCIEAACESRESVEKWRKQRRTLNSMPSPLADALLRRLFLRRLLFPSLLEVFKR 60
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E ++L+GEN+VDAEWMAYLGAFRYLRSLN+ADC R+ +SALW+L GMT LKE+D+SRC
Sbjct: 61 SVEVVDLKGENNVDAEWMAYLGAFRYLRSLNLADCHRINNSALWSLVGMTSLKEVDISRC 120
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAG++HL+SISTL+ L +SETG+TADGI LLSSL L VLDLG LPVTD L SLQ
Sbjct: 121 AKVTDAGIRHLVSISTLQILRISETGVTADGIKLLSSLTTLFVLDLGDLPVTDTALSSLQ 180
Query: 186 VL 187
VL
Sbjct: 181 VL 182
>gi|4972088|emb|CAB43884.1| putative protein [Arabidopsis thaliana]
gi|7269233|emb|CAB81302.1| putative protein [Arabidopsis thaliana]
Length = 364
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/372 (42%), Positives = 212/372 (56%), Gaps = 26/372 (6%)
Query: 238 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 297
++ CTI S + + + A L K+ L+G F E E+ + S +++LDVS +SL F FL
Sbjct: 1 MNTCTIVSEPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFL 60
Query: 298 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 357
M LEHLDLSS+ GDDSV VACVG NL+NLN+S+T+ + +GVG LAGH+P LE LS
Sbjct: 61 ETMFNLEHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNLAGHVPQLETLS 120
Query: 358 LSGTQIDDYAISYMSM-MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+S T +DD +I +S MP +K +D+ GF + + + SL ALQ+L LE L
Sbjct: 121 MSQTFVDDLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETL 180
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+LE + D L LS+ L HLSL + SLTD +LH LSSL L +L +RD VLT++GL
Sbjct: 181 SLEHPYLGDKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPNLVSLGVRDGVLTSNGL 240
Query: 477 GSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSP-SR 535
F+PP L+ LDL G WLLT+D I CK +P I+V HE + DQ N P S
Sbjct: 241 EKFRPPNRLRTLDLQGCWLLTKDDIAGLCKRYPHIKVRHEHADSSSLDQ---NQLLPRSS 297
Query: 536 TSLRASLVKQKQDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELL 595
T V ++ + P S + V S DQR+KY+REEL+
Sbjct: 298 TPQSFGKVARRNNQRPES---------------------SVAVPRSFLDQRVKYNREELV 336
Query: 596 ELQYSSLSLARP 607
LQ S LS P
Sbjct: 337 ALQNSPLSQLLP 348
>gi|413949467|gb|AFW82116.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 343
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 217/386 (56%), Gaps = 64/386 (16%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
S LV CI+AA + +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF +
Sbjct: 14 SRLVDRCIDAAARGPATVEAWRRQRRSLERLPAPLADALLRRLAARRLLFPSLLEVFGRS 73
Query: 67 AEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
E ++L G SV++EW+AYLG+FRYLR L +ADC+ + + A+W+L+G +
Sbjct: 74 VEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLSG-----------GI 122
Query: 127 KVTDAGMKHLLSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+TD ++ L ++ LE L W SET T +G + L S
Sbjct: 123 LMTDKTLQSLQVLTKLEHLDIWGSET--TNEGASALKS---------------------- 158
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 244
F RL LNLA T V L + LN+SNC I
Sbjct: 159 --------------------------FARLLSLNLALTRVNHLSIPPTTSYLNMSNCEIH 192
Query: 245 SILE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
SI + +E PL ++ TF N + F I+ S L LD+S+ LS FL +MK L
Sbjct: 193 SICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLSNLSFLEKMKNL 252
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
EHLDLS ++I D ++E +A +G NL+ L+L NT +S + ILAG +PNL LSL+ T+I
Sbjct: 253 EHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPNLTSLSLANTKI 312
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKG 389
DD A++Y+ M+P L+ ID+S T IKG
Sbjct: 313 DDSALAYIGMIPLLRTIDLSQTSIKG 338
>gi|22136662|gb|AAM91650.1| unknown protein [Arabidopsis thaliana]
Length = 192
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 155/185 (83%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
ES LVRLC++ AC+SG++V++WR QRRSLE LP HLAD+LLR L+++RL+FPSLLE FK+
Sbjct: 2 ESPLVRLCLKEACKSGDAVERWRLQRRSLESLPPHLADALLRRLLKKRLLFPSLLEGFKY 61
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
+ E I+LRG++SV+AEWMAY+G F L +LN++DC+R+ SS LW +TG+T L ELDLSRC
Sbjct: 62 SVENIDLRGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLTSLTELDLSRC 121
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
KVTDAGMKHL S+ L+KLW+S+TG+T GI+LL+SL+ LS+LDLGGLPVTD L SLQ
Sbjct: 122 FKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQ 181
Query: 186 VLTKL 190
VL L
Sbjct: 182 VLPVL 186
>gi|4454052|emb|CAA23049.1| hypothetical protein [Arabidopsis thaliana]
gi|7269232|emb|CAB81301.1| hypothetical protein [Arabidopsis thaliana]
Length = 227
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 156/220 (70%), Gaps = 35/220 (15%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEV--- 62
ES LVRLC++ AC+SG++V++WR QRRSLE LP HLAD+LLR L+++RL+FPSLLE+
Sbjct: 2 ESPLVRLCLKEACKSGDAVERWRLQRRSLESLPPHLADALLRRLLKKRLLFPSLLEIVLV 61
Query: 63 --------------------------------FKHNAEAIELRGENSVDAEWMAYLGAFR 90
FK++ E I+LRG++SV+AEWMAY+G F
Sbjct: 62 LVHRCGKCNDCMDTELLYLYHTTKQDSFLCRGFKYSVENIDLRGKSSVNAEWMAYIGGFV 121
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L +LN++DC+R+ SS LW +TG+T L ELDLSRC KVTDAGMKHL S+ L+KLW+S+T
Sbjct: 122 NLITLNLSDCQRINSSTLWPITGLTSLTELDLSRCFKVTDAGMKHLQSVVNLKKLWISQT 181
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
G+T GI+LL+SL+ LS+LDLGGLPVTD L SLQVL L
Sbjct: 182 GVTEVGISLLASLKKLSLLDLGGLPVTDQNLISLQVLPVL 221
>gi|302818476|ref|XP_002990911.1| hypothetical protein SELMODRAFT_132548 [Selaginella moellendorffii]
gi|300141242|gb|EFJ07955.1| hypothetical protein SELMODRAFT_132548 [Selaginella moellendorffii]
Length = 196
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
E LV LC+EAA +S +SV+ WRRQRR+LE LPAHLA+SLL L+ + L P LLE+F
Sbjct: 2 EGGGTLVDLCLEAASRSADSVRSWRRQRRTLEILPAHLAESLLHQLLVKNLFSPPLLELF 61
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT--CLKELD 121
+ + E ++L GE SVDAEWMAY+G FR+LR L V C+ + +SA+W L+G +
Sbjct: 62 QLSVEELDLNGELSVDAEWMAYIGGFRHLRVLKVESCKALNNSAIWHLSGKLHFSFERRL 121
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
+ RC K+T+ G++H+L++ L+ L LSETG+ GI L+ L+NLS LDLGGLPVTD +
Sbjct: 122 IDRCSKITNQGLEHILTLGKLKHLGLSETGIGEQGIGKLAVLRNLSHLDLGGLPVTDSHV 181
Query: 182 RSLQV 186
SL V
Sbjct: 182 SSLLV 186
>gi|452822896|gb|EME29911.1| leucine-rich repeat family protein [Galdieria sulphuraria]
Length = 588
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 232/494 (46%), Gaps = 71/494 (14%)
Query: 38 PAHLADSLLRHLIRRRLIFPSLLEVFK-HNAEAIELRGENSVDAEWMAYLGAFRYLRSLN 96
P L L+ +L+ R + LE + H + + V +W+ YL L L
Sbjct: 80 PRELIQRLVEYLVESRRLNCEFLETLQQHCVYRLRFTSQLQVTNDWLFYLQNLSTLSRLE 139
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL-SETGLTAD 155
+ DC+ ++ L L + L LDL+ CV++T G++HL + L+ L L S +T++
Sbjct: 140 LKDCKFISDEGLSNLAEIVSLTYLDLAGCVQITSEGLQHLAGLKYLKVLVLKSCKQITSE 199
Query: 156 GIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPR 213
G++ L++L NL+ LD+ V+D L+SL LTKLE + W ++S+ G +L F R
Sbjct: 200 GLSYLANLHNLTRLDIEQCSEVSDSFLQSLNRLTKLEDFNCAWCFRLSDEGLTILSNFHR 259
Query: 214 LSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 268
+ +LN++ T V++ LP + L L +AGT F +
Sbjct: 260 MRYLNISKTRVSQNFGRFLPGMPRLRVLK-----------------------VAGTGF-S 295
Query: 269 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 328
+R+A +L + +L LD+ +GD + + + +
Sbjct: 296 DRDAQ----------------------YLRGLYSLRELDVEGCSVGDPFLATIYAL-PRI 332
Query: 329 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI- 387
R LNL T+ S GV + G++ L+ L+L I D+A+ ++S + LK +D+++T +
Sbjct: 333 RKLNLGYTKISERGVSLYLGNMLKLQYLNLDSCLIGDFAVEHLSRLEQLKCLDLTDTTVS 392
Query: 388 ----KGFIQQVGAETDLVLSLTA--------LQNLNHLERLNLEQTQVSDATLFPLSTFK 435
G ET L+L+ T+ L+NL LE L+L+ +SD L L K
Sbjct: 393 SSGLSGLANLTSLET-LILAYTSVSNSGLEHLKNLTKLESLSLDTRGISDDGLAYLKKLK 451
Query: 436 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
L HL L A +TD L +S +S L +L + +T++GL S R+L+ L+L
Sbjct: 452 HLKHLDLFGAKVTDNGLRHISEISTLESLEVCAGGVTDAGLESIGKLRALRTLNLSQNHR 511
Query: 496 LTEDAILQF-CKMH 508
+T+ ++ C H
Sbjct: 512 ITDAGLIHLSCLSH 525
>gi|297604057|ref|NP_001054919.2| Os05g0212200 [Oryza sativa Japonica Group]
gi|255676136|dbj|BAF16833.2| Os05g0212200 [Oryza sativa Japonica Group]
Length = 153
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 91/127 (71%), Gaps = 8/127 (6%)
Query: 6 ESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH 65
E+ LV CI+AA +V+ WRRQRRSLERLPA LAD+LLR L RRL+FPSLLEVF+H
Sbjct: 16 ETPLVDRCIDAAAGGAATVEAWRRQRRSLERLPAQLADALLRRLAARRLLFPSLLEVFQH 75
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT--------CL 117
+ E I+L G +VDAEW+AYLGAFRYLR L +ADC+ V SSA+WAL+G C+
Sbjct: 76 SVEEIDLSGHIAVDAEWLAYLGAFRYLRVLKLADCKNVNSSAVWALSGTILEAFLNHDCI 135
Query: 118 KELDLSR 124
DL R
Sbjct: 136 YHGDLDR 142
>gi|302796665|ref|XP_002980094.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
gi|302822036|ref|XP_002992678.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300139524|gb|EFJ06263.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300152321|gb|EFJ18964.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
Length = 578
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 240/545 (44%), Gaps = 102/545 (18%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFK 64
+ L+ L + C++ + + +S E+LP L +L L++ + + L + F+
Sbjct: 52 KAPSLLELAVRETCKNTQGI-------KSFEKLPRDLTQKILNELVQTQALSRELFQAFE 104
Query: 65 HNA-EAIELRGENSVDAEWMAYLGAFRY----------------LRSLNVAD-------- 99
A + I L VD WM +G+ ++ ++ L + +
Sbjct: 105 DCAIQDIYLGYYPGVDDSWMEVIGSQKFCLLAVDFSGSMVTDEGVQCLQICENVEIICMN 164
Query: 100 -CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
C+ ++ +L TG T L L + +T AGM+HL + L+ L L DG+
Sbjct: 165 ECKYISDISLSYFTGFTNLTSLSFQKNKLITPAGMRHLAGLPNLKHLDLERCPKIHDGLV 224
Query: 159 LLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
+ L L L+LG + ++ L LT L L + S+V + G LK +L L
Sbjct: 225 YIKGLTKLEKLNLGWCNCIRSSDMKQLSGLTNLLELQISRSKVKDFGITFLKDLKKLEVL 284
Query: 218 NLAWTGVT-----KLPNISSLECLNLSNCTIDSI----LEGNENKAPLAKISLAGTTFIN 268
N+ VT + ++SL LNL +C I LEG N L
Sbjct: 285 NMEGCPVTFACMDTIAGLTSLTTLNLKSCYISDFGCRKLEGLGNLKNLN----------- 333
Query: 269 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 328
LS+ +VS++ + +L +K+L+ L+L S IGD V+ + NL
Sbjct: 334 ------------LSYTNVSDAGM---VYLKNLKSLQFLNLDSCKIGDQGVQNFKNL-VNL 377
Query: 329 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 388
++L+LS++ + + L G L LE L++S T + D + +S + SLK ++I + I
Sbjct: 378 KSLDLSDSLIGNHALNFLTG-LSKLESLNISSTMVTDMGLHKISGLTSLKSLNIDSRQI- 435
Query: 389 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ---------------------VSDAT 427
+T L ++LT+L NL HL+ + T ++D
Sbjct: 436 -------TDTGL-MALTSLTNLTHLDLFSARITDYGIGSLRHFKKLQSLEVCGGGITDVG 487
Query: 428 LFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 486
+ L +L +L+L +N LTD +L LS L+KL +L++ ++ +TN+GL P ++L
Sbjct: 488 VKSLKDLTDLTYLNLSQNGQLTDQALEALSGLTKLVSLNVGNSSVTNAGLQHLLPLKNLT 547
Query: 487 LLDLH 491
L L
Sbjct: 548 SLALQ 552
>gi|115447277|ref|NP_001047418.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|47497632|dbj|BAD19701.1| leucine-rich repeat-like protein [Oryza sativa Japonica Group]
gi|113536949|dbj|BAF09332.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|125582867|gb|EAZ23798.1| hypothetical protein OsJ_07510 [Oryza sativa Japonica Group]
gi|215704406|dbj|BAG93840.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 582
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 253/542 (46%), Gaps = 98/542 (18%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFK 64
R L+ LC+ AC E + K+ S LP L+ + L+ + +LLE F+
Sbjct: 56 RCPSLMELCVAKAC---EDINKYS----SFSVLPRDLSQQIFNELVASNRLTETLLETFR 108
Query: 65 HNA-EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKELDL 122
A + I+L V+ WM + + R+ L S++++ C +T S L+ L ++ L
Sbjct: 109 DCALQDIDLGEYPGVNDAWMEVVASQRHSLLSVDIS-CSEITDSGLYLLRDCPNMQSLAC 167
Query: 123 SRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDL-------GGL 174
+ C +++ G+ L +S L L + S G+TA+ + ++L NL LDL GGL
Sbjct: 168 NYCDMISEHGLGILSGLSNLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCLKIHGGL 227
Query: 175 ------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ D ++ L LT L+ L L ++++ G + L+ +L+
Sbjct: 228 VHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQ 287
Query: 217 LNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
LNL VT + ++SL LNLS C I EG EN L K+ +
Sbjct: 288 LNLEGCPVTAACLEAISGLASLVVLNLSRCGIYG--EGCENFQGLKKLKVLN-------- 337
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
L F ++++ L+ L ++ LE L+L S +GD+ + + L++L
Sbjct: 338 ---------LGFNNITDDCLAH---LKELINLESLNLDSCKVGDEGLLHLR-GLMLLKSL 384
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
LS+T S+G+ L+G L NLE ++LS T + D + +S + SLK +++ N I
Sbjct: 385 ELSDTEVGSSGLQHLSG-LRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQI---- 439
Query: 392 QQVGAETDLVLS-LTALQNLNHLERL----------------NLEQTQV-----SDATLF 429
TD+ L+ LT+L L HL+ NLE +V +DA +
Sbjct: 440 ------TDVGLAALTSLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCGGLITDAGVK 493
Query: 430 PLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
+ K L L+L +N +LTD +L +S L+ L +L++ + ++N+GL K ++L+ L
Sbjct: 494 NIKDLKALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRVSNAGLRHLKDLQNLRSL 553
Query: 489 DL 490
L
Sbjct: 554 SL 555
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 193/415 (46%), Gaps = 43/415 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + + + AE M L +L++ C ++ L L G+ L+ L++ C
Sbjct: 186 NLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCLKI-HGGLVHLKGLRNLESLNMRYC 244
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ D+ +K+L ++ L++L L+ +T G++ L L L+ L+L G PVT L ++
Sbjct: 245 NNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACLEAIS 304
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L + G + +L LNL + +T L + +LE LNL +
Sbjct: 305 GLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDS 364
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C + G+E L + L + +++ E V +S L L+ +
Sbjct: 365 CKV-----GDEGLLHLRGLMLLKSLELSDTE--------------VGSSGLQH---LSGL 402
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+ LE ++LS +++ D ++ ++ + + L+++NL N + + G+ L L L L L G
Sbjct: 403 RNLESINLSFTLVTDTGMKKISALNS-LKSVNLDNRQITDVGLAALT-SLTGLTHLDLFG 460
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I DY S +L+ +++ G I G + +++L L++LNL Q
Sbjct: 461 ARITDYGTSCFRFFKNLESLEVCG----GLITDAGVKN--------IKDLKALKQLNLSQ 508
Query: 421 T-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
++D TL +S L+ L++ N +++ L L L L +LS+ +T S
Sbjct: 509 NVNLTDKTLELISGLTALVSLNVSNTRVSNAGLRHLKDLQNLRSLSLDSCRVTTS 563
>gi|224120462|ref|XP_002331054.1| predicted protein [Populus trichocarpa]
gi|222872984|gb|EEF10115.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 248/518 (47%), Gaps = 96/518 (18%)
Query: 32 RSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGEN-SVDAEWMAYLGA-F 89
+S LP L+ + L+ + + LE F+ A L GE V WM + +
Sbjct: 71 KSYSMLPRDLSQQIFNELVISHSLTAASLEAFRDCALQDVLLGEYPGVMDSWMDVISSQG 130
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L S++++D VT + L L + L+ + L+ C ++D G+KHL ++ + L L +
Sbjct: 131 SSLLSVDLSD-SDVTDAGLGLLKDCSNLQAIALNYCNNISDNGLKHLSGLTNITSLSLKK 189
Query: 150 T-GLTADGIALLSSLQNLSVLDL-------GGLP------------------VTDLVLRS 183
+ +TA+G+ S+L NL LD+ GGL +TD+ +++
Sbjct: 190 SCSVTAEGMRAFSTLLNLENLDMERCSGIHGGLVHLKGLKKLESLNIRCCKCITDMDMKA 249
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNL 238
+ LT L+ L + + V++ G + L+ +L LNL +T + +++L LNL
Sbjct: 250 ISGLTNLKELQISNTNVTDVGVSYLRGLQKLIMLNLEGCNITTACLDSISALATLAYLNL 309
Query: 239 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 298
+ C + +G + + L + + L+F DV+++ L L
Sbjct: 310 NRCHLPD--DGCDKFSGLKNLKVLS-----------------LAFNDVTDACLVH---LK 347
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
+K LE L+L S IGD+ + +A G L++L LS+T S+G+ L+G +P+LE L+L
Sbjct: 348 GLKNLESLNLDSCRIGDEGIANLA--GLPLKSLELSDTIVGSSGLRHLSG-IPHLENLNL 404
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 418
S T + D + +S + SL+ +++ I TD LTAL +L L RL+L
Sbjct: 405 SFTLVTDGGLRKLSGLTSLRSLNLDARQI----------TDA--GLTALTSLTGLTRLDL 452
Query: 419 EQTQVSDATLFPLSTFK---------------------ELIHLSL----RNASLTDVSLH 453
+++D+ L FK +L+HL++ +N +LTD +L
Sbjct: 453 FGARITDSGTNCLKYFKNLKSLEICGGGLTDAGVKNIKDLVHLTVLNLSQNTNLTDKTLE 512
Query: 454 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+S L++L +L++ ++++TN GL KP ++L+ L L
Sbjct: 513 LISGLTELVSLNVSNSLITNEGLRYLKPLKNLRALTLE 550
>gi|359484681|ref|XP_002262830.2| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Vitis vinifera]
gi|296084545|emb|CBI25566.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 191/407 (46%), Gaps = 37/407 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + N+V AE M + L L++ C R+ L L G+T L+ L++ C
Sbjct: 182 NLTSLSFKKSNTVTAEGMRAFSSLVNLAKLDLERCSRI-HGGLIHLKGLTKLESLNIRYC 240
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K L +++L++L +S + +T GI+ L L L +LD+ G VT L SL
Sbjct: 241 KCITDSDLKALSGLTSLKELQMSCSNITDIGISYLKGLCKLMLLDVEGCHVTTSCLDSLS 300
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L YL+L +S+ G L LN+ + +T L +++LE LNL +
Sbjct: 301 ALVALSYLNLNRCGLSDVGCEKFSGLKNLKVLNMGFNNITDACLVHLKGLTNLESLNLDS 360
Query: 241 CTIDSILEGNENKAPLAKISL----------AGTTFINEREAFLYIETSLLSFLDVSNSS 290
C+I+ +E A L +SL G+ + +E+ LSF V++S
Sbjct: 361 CSIE-----DEGLANLTGLSLLKCLELSDTKVGSNGLCHLSGLTKLESLNLSFTLVTDSG 415
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 350
L + C LT +K+ L+L + I D + + + L +L+L R S AG L H
Sbjct: 416 LKKLCGLTSLKS---LNLDARQITDAGLAAITSL-TGLTHLDLFGARISDAGTNCLR-HF 470
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
NL+ L + G + D + + + SL +++S Q TD L + + L
Sbjct: 471 KNLQTLEICGGGLTDAGVKNIKGLASLTLLNLS---------QNCNLTDKTLEM--ISGL 519
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 457
L LN+ +++++ L L K L+ LSL + +T + +L S
Sbjct: 520 TALVSLNVSNSRITNNGLQHLKPLKNLLSLSLESCKVTASEIRKLQS 566
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 233/519 (44%), Gaps = 71/519 (13%)
Query: 1 MERERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLL 60
+ RE L+ LCI C E + ++ + LP ++ + + + + + L
Sbjct: 48 LGRESCPSLMELCIHKIC---EDIDRYTK----FSMLPRDISQQIFDNFVDSHCLTSASL 100
Query: 61 EVFKHNA-EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLK 118
E F+ A + + L V+ WM + + L S++++ VT L L + ++
Sbjct: 101 EAFRDCAIQDVNLGEYPEVNDSWMDIISSQGLSLLSVDLSG-SSVTDDGLSLLKDCSNIQ 159
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLPVT 177
L + C ++++ G+K++ +S L L ++ +TA+G+ SSL NL+ LDL
Sbjct: 160 VLSFNYCDQISEPGLKNISGLSNLTSLSFKKSNTVTAEGMRAFSSLVNLAKLDLERCSRI 219
Query: 178 DLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ LTKLE L++ + +++ + LK A +G+T L + + C
Sbjct: 220 HGGLIHLKGLTKLESLNIRYCKCITD---SDLK----------ALSGLTSLKELQ-MSCS 265
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
N+++ I S L+G L K+ L LDV ++ C
Sbjct: 266 NITDIGI-SYLKG------LCKLML----------------------LDVEGCHVTTSCL 296
Query: 297 --LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
L+ + AL +L+L+ + D E + + NL+ LN+ + A + L G L NLE
Sbjct: 297 DSLSALVALSYLNLNRCGLSDVGCEKFSGL-KNLKVLNMGFNNITDACLVHLKG-LTNLE 354
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAET--DLVLSLT----- 405
L+L I+D ++ ++ + LK +++S+T + G G L LS T
Sbjct: 355 SLNLDSCSIEDEGLANLTGLSLLKCLELSDTKVGSNGLCHLSGLTKLESLNLSFTLVTDS 414
Query: 406 ---ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
L L L+ LNL+ Q++DA L +++ L HL L A ++D + L L
Sbjct: 415 GLKKLCGLTSLKSLNLDARQITDAGLAAITSLTGLTHLDLFGARISDAGTNCLRHFKNLQ 474
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
L I LT++G+ + K SL LL+L LT+ +
Sbjct: 475 TLEICGGGLTDAGVKNIKGLASLTLLNLSQNCNLTDKTL 513
>gi|125540271|gb|EAY86666.1| hypothetical protein OsI_08050 [Oryza sativa Indica Group]
Length = 582
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 252/542 (46%), Gaps = 98/542 (18%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFK 64
R L+ LC+ AC E + K+ S LP L+ + L+ + +LLE F
Sbjct: 56 RCPSLMELCVAKAC---EDINKYS----SFSVLPRDLSQQIFNELVASNRLTETLLETFW 108
Query: 65 HNA-EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKELDL 122
A + I+L V+ WM + + R+ L S++++ C +T S L+ L ++ L
Sbjct: 109 DCALQDIDLGEYPGVNDAWMEVVASQRHSLLSVDIS-CSEITDSGLYLLRDCPNMQSLAC 167
Query: 123 SRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDL-------GGL 174
+ C +++ G+ L +S L L + S G+TA+ + ++L NL LDL GGL
Sbjct: 168 NYCDMISEHGLGILSGLSNLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCLKIHGGL 227
Query: 175 ------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ D ++ L LT L+ L L ++++ G + L+ +L+
Sbjct: 228 VHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQ 287
Query: 217 LNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
LNL VT + ++SL LNLS C I EG EN L K+ +
Sbjct: 288 LNLEGCPVTAACLEAISGLASLVVLNLSRCGIYG--EGCENFQGLKKLKVLN-------- 337
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
L F ++++ L+ L ++ LE L+L S +GD+ + + L++L
Sbjct: 338 ---------LGFNNITDDCLAH---LKELINLESLNLDSCKVGDEGLLHLR-GLMLLKSL 384
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
LS+T S+G+ L+G L NLE ++LS T + D + +S + SLK +++ N I
Sbjct: 385 ELSDTEVGSSGLQHLSG-LRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQI---- 439
Query: 392 QQVGAETDLVLS-LTALQNLNHLERL----------------NLEQTQV-----SDATLF 429
TD+ L+ LT+L L HL+ NLE +V +DA +
Sbjct: 440 ------TDVGLAALTSLTGLTHLDLFGARITDYGTSCFRFFKNLESLEVCGGLITDAGVK 493
Query: 430 PLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
+ K L L+L +N +LTD +L +S L+ L +L++ + ++N+GL K ++L+ L
Sbjct: 494 NIKDLKALKQLNLSQNVNLTDKTLELISGLTALVSLNVSNTRISNAGLRHLKDLQNLRSL 553
Query: 489 DL 490
L
Sbjct: 554 SL 555
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 193/415 (46%), Gaps = 43/415 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + + + AE M L +L++ C ++ L L G+ L+ L++ C
Sbjct: 186 NLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCLKI-HGGLVHLKGLRNLESLNMRYC 244
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ D+ +K+L ++ L++L L+ +T G++ L L L+ L+L G PVT L ++
Sbjct: 245 NNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPVTAACLEAIS 304
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L + G + +L LNL + +T L + +LE LNL +
Sbjct: 305 GLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELINLESLNLDS 364
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C + G+E L + L + +++ E V +S L L+ +
Sbjct: 365 CKV-----GDEGLLHLRGLMLLKSLELSDTE--------------VGSSGLQH---LSGL 402
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+ LE ++LS +++ D ++ ++ + + L+++NL N + + G+ L L L L L G
Sbjct: 403 RNLESINLSFTLVTDTGMKKISALNS-LKSVNLDNRQITDVGLAALT-SLTGLTHLDLFG 460
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I DY S +L+ +++ G I G + +++L L++LNL Q
Sbjct: 461 ARITDYGTSCFRFFKNLESLEVCG----GLITDAGVKN--------IKDLKALKQLNLSQ 508
Query: 421 T-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
++D TL +S L+ L++ N +++ L L L L +LS+ +T S
Sbjct: 509 NVNLTDKTLELISGLTALVSLNVSNTRISNAGLRHLKDLQNLRSLSLDSCRVTTS 563
>gi|46446831|ref|YP_008196.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400472|emb|CAF23921.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 666
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 251/512 (49%), Gaps = 41/512 (8%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIE-LRGENSV---DAEWMAY 85
R L RL +L +++ L+ + + H ++ IE L N++ DA +A
Sbjct: 146 HRCQLNRLKDYLESTVVNALLNQTFQLAEFERIINHLSDEIEALDFFNNIYLTDAHLLA- 204
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L+ L+ +CR +T + L LT +T L+ L+LS+ +TDAG+ HL ++ L+ L
Sbjct: 205 LKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLNLSKLWCITDAGLAHLTTLKALQHL 264
Query: 146 WLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-VSN 202
LS+ + LT DG+A L+ L L L L +TD L L +LT L++LDL + +++
Sbjct: 265 DLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCKNLTD 324
Query: 203 RGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCT--IDSILEGNENKA 254
G A L L L+L+W G+ L +++ L+ L+LSNC D+ L +
Sbjct: 325 AGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLM 384
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVS--NSSLSRFCFLTQMKALEHLDLSSS- 311
L ++L+ + + + L L++S N + + LT + L+HLDLS S
Sbjct: 385 ALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSR 444
Query: 312 -MIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAI 368
+I + V L++LNL+ + + AG+ L+ L L+ L LS Q + +
Sbjct: 445 KLIDAGLAHLRPLVA--LQHLNLTGCWKLTDAGLAHLSP-LKALQTLGLSWCQNLTGAGL 501
Query: 369 SYMSMMPSLKFIDISN----TDIK-GFIQQVGAETDLVLS---------LTALQNLNHLE 414
+++ + +L+++D+SN TD ++ + A L L+ L L +L L+
Sbjct: 502 AHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMALQ 561
Query: 415 RLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLT 472
LNL +++DA L L L HL L N +LTD L L L L +L++ LT
Sbjct: 562 HLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLT 621
Query: 473 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
+ GL P +L+ LDL + LT+ + F
Sbjct: 622 DDGLAHLTPLTTLQYLDLSSCYNLTDAGLAHF 653
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 208/406 (51%), Gaps = 50/406 (12%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN DA +A+L L+ L++++C+ +T + L LT + L+ LDLS C+K+TDAG+
Sbjct: 295 ENLTDAG-LAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLA 353
Query: 135 HLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEY 192
HL S++ L+ L LS LT G+A L+SL L L+L L +TD L L LT L++
Sbjct: 354 HLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQH 413
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSI 246
L+L ++ G A L L L+L+ + G+ L + +L+ LNL+ C
Sbjct: 414 LNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGC----- 468
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
K++ AG ++ +A ++T LS+ N + + L + AL++L
Sbjct: 469 ----------WKLTDAGLAHLSPLKA---LQTLGLSW--CQNLTGAGLAHLKPLVALQYL 513
Query: 307 DLSS-SMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGT-QI 363
DLS+ + + D + + + A L++LNL+ + + AG+ L L L+ L+LS ++
Sbjct: 514 DLSNCNNLTDAGLAHLRPLVA-LQHLNLTGCWKLTDAGLAHLTS-LMALQHLNLSWCLKL 571
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
D ++++ + +L+ +D+SN + + E LT L+ L L+ LNL + +
Sbjct: 572 TDAGLAHLKPLVALQHLDLSNCN------NLTDE-----GLTHLRPLVALQHLNLSRYNL 620
Query: 424 SD---ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+D A L PL+T + L S N LTD L +++ NL I
Sbjct: 621 TDDGLAHLTPLTTLQYLDLSSCYN--LTDAGLAHFKTVAASLNLKI 664
>gi|59802533|gb|AAX07510.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 550
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 210/441 (47%), Gaps = 37/441 (8%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V + L L SL ++ +VT+ L L +T L LDL VTD G++ L
Sbjct: 6 VTDAGLQELKGLANLTSLGLS-ATKVTNEGLKELKELTNLTALDLF-STGVTDTGLQELK 63
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L T +T G+ L L NL+ L+LG VTD L+ L+ L KL LDL G
Sbjct: 64 GLTNLTSLNLGVTQVTGAGLQELKGLTNLTSLNLGSTGVTDAGLQDLKGLNKLASLDLRG 123
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSI----LE 248
++V++ G LK L+ L L T VT +L +++L L+L + + + L+
Sbjct: 124 TEVTDVGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRVTDVGLQELK 183
Query: 249 GNENKAPL----AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
G N A L K++ G + E + + L V++ L LT++ +L
Sbjct: 184 GLNNLASLDLRDTKVTDTG---LKELKGLTNLTALDLFSTQVTDVGLKELNGLTKLASL- 239
Query: 305 HLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
DLS + + G +E+ + L L+LS TR + AG+ L G L +L L L GT++
Sbjct: 240 --DLSRTGVTGTGLIELKSFT--KLALLDLSGTRVTDAGLHQLKG-LTSLTSLHLGGTRV 294
Query: 364 DDYAISYMSMMPSLKFIDISNT-DIKGFIQQVGAETDLV-----------LSLTALQNLN 411
D + + + SL + +S T +Q++ T+L + L L++
Sbjct: 295 TDVGLKELKGLTSLTSLHLSGTRTTDAGLQELNGLTNLTSLHLSDTRVTDVGLKELKSFT 354
Query: 412 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 471
L L+L T V+D L L L L L + +TDV L +L+ L+KLT+L + A +
Sbjct: 355 KLTSLHLGGTGVTDTGLKELKGLTNLTALDLFSTQVTDVGLQELNGLTKLTSLYLSAAAI 414
Query: 472 TNSGLGSFKPPRSLKLLDLHG 492
T++GL K L LLDL G
Sbjct: 415 TDTGLKELKELTQLALLDLSG 435
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 165/356 (46%), Gaps = 39/356 (10%)
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+VTDAG++ L ++ L L LS T +T +G+ L L NL+ LDL VTD L+ L
Sbjct: 3 STQVTDAGLQELKGLANLTSLGLSATKVTNEGLKELKELTNLTALDLFSTGVTDTGLQEL 62
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 244
+ LT L L+L +QV+ G LK L+ LNL TGVT + L+ LN
Sbjct: 63 KGLTNLTSLNLGVTQVTGAGLQELKGLTNLTSLNLGSTGVTD-AGLQDLKGLN------- 114
Query: 245 SILEGNENKAPLAKISLAGTTF----INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
LA + L GT + E + + L +V+N L L +
Sbjct: 115 ----------KLASLDLRGTEVTDVGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNL 164
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+ LDL + + D ++ + + NL +L+L +T+ + G+ L G L NL L L
Sbjct: 165 AS---LDLRDTRVTDVGLQELKGL-NNLASLDLRDTKVTDTGLKELKG-LTNLTALDLFS 219
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
TQ+ D + ++ + L +D+S T + G L L++ L L+L
Sbjct: 220 TQVTDVGLKELNGLTKLASLDLSRTGVTGT------------GLIELKSFTKLALLDLSG 267
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
T+V+DA L L L L L +TDV L +L L+ LT+L + T++GL
Sbjct: 268 TRVTDAGLHQLKGLTSLTSLHLGGTRVTDVGLKELKGLTSLTSLHLSGTRTTDAGL 323
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 196/429 (45%), Gaps = 38/429 (8%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G V + L L SL++ VT L L G+ L EL L R +VT+ G+
Sbjct: 98 GSTGVTDAGLQDLKGLNKLASLDLRGTE-VTDVGLQELKGLNSLTELRL-RATEVTNVGL 155
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L ++ L L L +T +T G+ L L NL+ LDL VTD L+ L+ LT L L
Sbjct: 156 QELKGLNNLASLDLRDTRVTDVGLQELKGLNNLASLDLRDTKVTDTGLKELKGLTNLTAL 215
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSIL 247
DL+ +QV++ G L +L+ L+L+ TGVT +L + + L L+LS + D+ L
Sbjct: 216 DLFSTQVTDVGLKELNGLTKLASLDLSRTGVTGTGLIELKSFTKLALLDLSGTRVTDAGL 275
Query: 248 EGNENKAPLAKISLAGTTF----INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L + L GT + E + + + LS +++ L LT + +L
Sbjct: 276 HQLKGLTSLTSLHLGGTRVTDVGLKELKGLTSLTSLHLSGTRTTDAGLQELNGLTNLTSL 335
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
LS + + D ++ + L +L+L T + G+ L G L NL L L TQ+
Sbjct: 336 H---LSDTRVTDVGLKELKSF-TKLTSLHLGGTGVTDTGLKELKG-LTNLTALDLFSTQV 390
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
D + ++ + L + +S A TD L L+ L L L+L T+V
Sbjct: 391 TDVGLQELNGLTKLTSLYLS----------AAAITDT--GLKELKELTQLALLDLSGTRV 438
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK--- 480
+DA L LS +L L L +TD L +L L+ LT+L + +T++GL
Sbjct: 439 TDAGLQELSGLTKLAFLRLGGTRVTDAGLKELKGLTSLTSLHLSGTRVTDAGLQELSGLT 498
Query: 481 ------PPR 483
PPR
Sbjct: 499 NLTTTGPPR 507
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 207/447 (46%), Gaps = 45/447 (10%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G V + L L SLN+ VT + L L G+ L LDL R +VTD G+
Sbjct: 74 GVTQVTGAGLQELKGLTNLTSLNLGSTG-VTDAGLQDLKGLNKLASLDL-RGTEVTDVGL 131
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L +++L +L L T +T G+ L L NL+ LDL VTD+ L+ L+ L L L
Sbjct: 132 QELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRVTDVGLQELKGLNNLASL 191
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILE 248
DL ++V++ G LK L+ L+L T VT +L ++ L L+LS
Sbjct: 192 DLRDTKVTDTGLKELKGLTNLTALDLFSTQVTDVGLKELNGLTKLASLDLS--------- 242
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 308
+ + GT I E ++F + LS V+++ L + LT + +L L
Sbjct: 243 ---------RTGVTGTGLI-ELKSFTKLALLDLSGTRVTDAGLHQLKGLTSLTSLH---L 289
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ + D ++ + + +L +L+LS TR + AG+ L G L NL L LS T++ D +
Sbjct: 290 GGTRVTDVGLKELKGL-TSLTSLHLSGTRTTDAGLQELNG-LTNLTSLHLSDTRVTDVGL 347
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
+ L + + T + TD L L+ L +L L+L TQV+D L
Sbjct: 348 KELKSFTKLTSLHLGGTGV----------TDT--GLKELKGLTNLTALDLFSTQVTDVGL 395
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
L+ +L L L A++TD L +L L++L L + +T++GL L L
Sbjct: 396 QELNGLTKLTSLYLSAAAITDTGLKELKELTQLALLDLSGTRVTDAGLQELSGLTKLAFL 455
Query: 489 DLHGGWLLTEDAILQFCKMHPRIEVWH 515
L GG +T DA L+ K + H
Sbjct: 456 RL-GGTRVT-DAGLKELKGLTSLTSLH 480
>gi|168012567|ref|XP_001758973.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689672|gb|EDQ76042.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 584
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 238/509 (46%), Gaps = 71/509 (13%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-----------------EAIEL 72
+ +SL R+P L +L L+RR+L+ P+ LE+F + + I
Sbjct: 74 KHKSLARVPRDLIQLVLDELVRRQLLSPTTLELFSDCSLQDVLLPDYPGVEDSWLQVIGS 133
Query: 73 RGEN---------SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS 123
+GE+ +V E +++L + L+SL + C + L +L+G++ L L L
Sbjct: 134 QGESLLALDISSSTVTDEGLSFLESCTNLQSLILNACESIADEGLTSLSGLSNLTTLSLR 193
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLR 182
+T AGM++ + +L+ L L G L L L L++G + V + ++
Sbjct: 194 SNNMITAAGMQNFTHLVSLKNLDLQRCPSIQGGFVYLKGLTTLEKLNVGWCIGVRNSDIK 253
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
L L L+ L + S+VS+ G A L TG+TKL ++S C +++
Sbjct: 254 HLSGLVNLKELQISRSKVSDSGLASL-------------TGLTKLRSLSMEGCQAVTSKG 300
Query: 243 IDSI--LEG----NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
++SI L G N N L + + E + + T + + +VSNS + F
Sbjct: 301 MESIGGLTGVWHLNVNSCFLHD------SGFQKLEGLINLRTLNMGYNNVSNSGMG---F 351
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L + LE L+L S IGD +E V + NL+ L+LS+T SAG+ L G L NLE L
Sbjct: 352 LKGLTNLERLNLDSCKIGDHGIENVKGL-VNLKMLDLSDTEIESAGLRFLTG-LKNLESL 409
Query: 357 SLSGT-QIDDYAISYMSMMPSLKFID-----ISNTDIKGFIQQVGAET-DLV------LS 403
+LS T I D + ++ + SL ++ I++T + G +T DL
Sbjct: 410 NLSFTGGIADSGLRTIATITSLTSLNLDSKQITDTGLAALTGLTGLKTLDLFGARITDYG 469
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLT 462
+ L++ L+ L L ++DA + + L L+L +N LTD SL LS + L
Sbjct: 470 MACLRHFKKLQTLELCGGGITDAGVRSIKDLTSLTSLNLSQNMRLTDNSLQYLSGMKNLV 529
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+L++ ++ +TN+GL +P +L L L
Sbjct: 530 SLNLANSRVTNAGLQHLRPLTNLTSLALQ 558
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 201/417 (48%), Gaps = 49/417 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + LR N + A M L++L++ C + ++ L G+T L++L++ C
Sbjct: 186 NLTTLSLRSNNMITAAGMQNFTHLVSLKNLDLQRCPSIQGGFVY-LKGLTTLEKLNVGWC 244
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSL 184
+ V ++ +KHL + L++L +S + ++ G+A L+ L L L + G VT + S+
Sbjct: 245 IGVRNSDIKHLSGLVNLKELQISRSKVSDSGLASLTGLTKLRSLSMEGCQAVTSKGMESI 304
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLS 239
LT + +L++ + + G L+ L LN+ + V+ L +++LE LNL
Sbjct: 305 GGLTGVWHLNVNSCFLHDSGFQKLEGLINLRTLNMGYNNVSNSGMGFLKGLTNLERLNLD 364
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFL 297
+C I G EN L L LD+S++ + + FL
Sbjct: 365 SCKIGD--HGIENVKGLVN----------------------LKMLDLSDTEIESAGLRFL 400
Query: 298 TQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
T +K LE L+LS + I D + +A + +L +LNL + + + G+ L G L L+ L
Sbjct: 401 TGLKNLESLNLSFTGGIADSGLRTIATI-TSLTSLNLDSKQITDTGLAALTG-LTGLKTL 458
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
L G +I DY ++ + L+ +++ G I G ++++L L L
Sbjct: 459 DLFGARITDYGMACLRHFKKLQTLELCG----GGITDAGVR--------SIKDLTSLTSL 506
Query: 417 NLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
NL Q +++D +L LS K L+ L+L N+ +T+ L L L+ LT+L+++D +T
Sbjct: 507 NLSQNMRLTDNSLQYLSGMKNLVSLNLANSRVTNAGLQHLRPLTNLTSLALQDCKVT 563
>gi|406836026|ref|ZP_11095620.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 586
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 205/440 (46%), Gaps = 55/440 (12%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
A R L ++++++ +T SAL L+ + L ++LS K+ +G+ L + L+ L L
Sbjct: 145 ALRNLTAIDLSETA-ITDSALKPLSVLENLSTINLS-TTKIDGSGLADLSGLKNLKTLVL 202
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
S + +T + +A +++L+NL+ L+L P++ L+SL LT L L+L + + + G A
Sbjct: 203 SHSPITNEALAGVAALRNLTTLELWNTPISADGLKSLGTLTDLTKLNLGFTSLDDTGLAE 262
Query: 208 LKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI-DSILEGNENKAPLAKISL 261
L L LNL TGVT L I +L LNL++ I D+ + L ++ L
Sbjct: 263 LATLTNLKALNLMQTGVTDTGLSSLSQIKNLTNLNLNDTQITDAGMVAIARHKDLNELHL 322
Query: 262 AGTTF----------------------------INEREAFLYIETSLLSFLDVSNSSLSR 293
GT + E F +++ L VS+ L
Sbjct: 323 EGTRLTDVGLRALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRLGSTKVSDEGLKS 382
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
L L+ L L + I D + +A + L L+L T + GV L G L NL
Sbjct: 383 LLGLEH---LQSLGLGGTGITDVGAKQLASL-TTLTGLDLDATAVTDEGVRELGG-LSNL 437
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFI-----DISNTDIKGFIQQVGAETDLVLSLTA-- 406
E LSL T+I D +S + LK + IS+ +KG + + T L LS+T
Sbjct: 438 EYLSLISTKISDDGVSGLGAFKKLKMLFLHNNQISDEGLKG-LNDLSQLTTLYLSMTQVT 496
Query: 407 ------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
L+NL HL+ L L TQ++DA L L+ EL L +RN ++TD L L+S
Sbjct: 497 DVGMKELKNLKHLKDLVLCDTQITDAGLKELTGLSELNVLVIRNVAVTDACLEHLTSFKN 556
Query: 461 LTNLSIRDAVLTNSGLGSFK 480
LT+L I + +GL +FK
Sbjct: 557 LTHLCIDVHRFSEAGLNAFK 576
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 187/416 (44%), Gaps = 49/416 (11%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G + ++ + L SL++++ + +T L L + L L+L R +
Sbjct: 54 GISFAGNARFNDRYVHLISPLGRLESLDLSNTQ-ITDLGLKELRKLNALTSLNL-RYTAI 111
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+D G+ L +S L+ L LS T ++ G+ L +L+NL+ +DL +TD L+ L VL
Sbjct: 112 SDVGLSELSEMSKLDTLNLSATQISDAGLDKLLALRNLTAIDLSETAITDSALKPLSVLE 171
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFL--------NLAWTGVTKLPNISSLECLNLSN 240
L ++L +++ G A L L L N A GV L N+++LE L N
Sbjct: 172 NLSTINLSTTKIDGSGLADLSGLKNLKTLVLSHSPITNEALAGVAALRNLTTLE---LWN 228
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
I + +G ++ L + T +N L F + ++ L+ LT +
Sbjct: 229 TPISA--DGLKSLGTLTDL-----TKLN------------LGFTSLDDTGLAELATLTNL 269
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
KAL + + G S+ + NL NLNL++T+ + AG+ +A H +L L L G
Sbjct: 270 KALNLMQTGVTDTGLSSLSQI----KNLTNLNLNDTQITDAGMVAIARH-KDLNELHLEG 324
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
T++ D + + + L + I T + G E L HL+ L L
Sbjct: 325 TRLTDVGLRALKTLGELDVLQIGKT----AVTDAGVE--------ELAGFKHLKILRLGS 372
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
T+VSD L L + L L L +TDV QL+SL+ LT L + +T+ G+
Sbjct: 373 TKVSDEGLKSLLGLEHLQSLGLGGTGITDVGAKQLASLTTLTGLDLDATAVTDEGV 428
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 168/340 (49%), Gaps = 43/340 (12%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ L+S L L LDL +TDL L+ L+ L L L+L + +S+ G + L +L
Sbjct: 68 VHLISPLGRLESLDLSNTQITDLGLKELRKLNALTSLNLRYTAISDVGLSELSEMSKLDT 127
Query: 217 LNLAWT-----GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINER 270
LNL+ T G+ KL + +L ++LS I DS L+ PL+ L + IN
Sbjct: 128 LNLSATQISDAGLDKLLALRNLTAIDLSETAITDSALK------PLS--VLENLSTIN-- 177
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
LS + S L+ L+ +K L+ L LS S I ++++ VA + NL
Sbjct: 178 ----------LSTTKIDGSGLAD---LSGLKNLKTLVLSHSPITNEALAGVAAL-RNLTT 223
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L L NT S+ G+ L G L +L L+L T +DD ++ ++ + +LK +++ T +
Sbjct: 224 LELWNTPISADGLKSL-GTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQTGV--- 279
Query: 391 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
TD LS +L + +L LNL TQ++DA + ++ K+L L L LTDV
Sbjct: 280 -------TDTGLS--SLSQIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGTRLTDV 330
Query: 451 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L L +L +L L I +T++G+ + LK+L L
Sbjct: 331 GLRALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRL 370
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 134/299 (44%), Gaps = 42/299 (14%)
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSM 312
P+ IS AG N+R L L LD+SN+ ++ L ++ AL L+L +
Sbjct: 51 PIVGISFAGNARFNDRYVHLISPLGRLESLDLSNTQITDLGLKELRKLNALTSLNLRYTA 110
Query: 313 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
I D + ++ + + L LNLS T+ S AG+ L L NL + LS T I D A+ +S
Sbjct: 111 ISDVGLSELSEM-SKLDTLNLSATQISDAGLDKLLA-LRNLTAIDLSETAITDSALKPLS 168
Query: 373 MMPSLKFIDISNTDIKGF----IQQVGAETDLVLS-----------LTALQNLNHLE--- 414
++ +L I++S T I G + + LVLS + AL+NL LE
Sbjct: 169 VLENLSTINLSTTKIDGSGLADLSGLKNLKTLVLSHSPITNEALAGVAALRNLTTLELWN 228
Query: 415 ------------------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 456
+LNL T + D L L+T L L+L +TD L LS
Sbjct: 229 TPISADGLKSLGTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQTGVTDTGLSSLS 288
Query: 457 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
+ LTNL++ D +T++G+ + + L L L G L D L+ K ++V
Sbjct: 289 QIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGTRL--TDVGLRALKTLGELDVLQ 345
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 127/281 (45%), Gaps = 41/281 (14%)
Query: 88 AFRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
A + L L+V + VT + + L G LK L L KV+D G+K LL + L+ L
Sbjct: 334 ALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRLG-STKVSDEGLKSLLGLEHLQSL 392
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L TG+T G L+SL L+ LDL VTD +R L L+ LEYL L +++S+ G
Sbjct: 393 GLGGTGITDVGAKQLASLTTLTGLDLDATAVTDEGVRELGGLSNLEYLSLISTKISDDGV 452
Query: 206 AVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 259
+ L F +L L ++ G+ L ++S L L LS + + ++ +N L +
Sbjct: 453 SGLGAFKKLKMLFLHNNQISDEGLKGLNDLSQLTTLYLSMTQVTDVGMKELKNLKHLKDL 512
Query: 260 SLAGTTFINEREAFLYIETSL--LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGD 315
L T +A L T L L+ L + N +++ C LT K L HL
Sbjct: 513 VLCDTQIT---DAGLKELTGLSELNVLVIRNVAVTDACLEHLTSFKNLTHL--------- 560
Query: 316 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
C+ + RFS AG+ +PN+ +L
Sbjct: 561 -------CIDVH---------RFSEAGLNAFKTSMPNVRVL 585
>gi|182407840|gb|ACB87911.1| F-box-containing protein 1 [Malus x domestica]
Length = 580
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 242/535 (45%), Gaps = 90/535 (16%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA- 67
L+ LCI CQS + K+ S LP ++ + L+ + LE F+ A
Sbjct: 58 LLELCIYKICQS---IDKYS----SFSMLPRDVSQQIFNELVCSNSLTDVSLEAFRDCAL 110
Query: 68 EAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
E I L V WM + + L S++++ VT S L L G + L+ L + C
Sbjct: 111 EDIGLGEYPDVKDSWMGVISSQGSSLLSVDLSG-SEVTDSGLALLKGCSNLQALAYNYCD 169
Query: 127 KVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL-------GGL---- 174
V++ G+KH+ +S L L + ++A+G+ S L NL LDL GG
Sbjct: 170 HVSEQGLKHISGLSNLTSLSFKRSDAISAEGMRAFSGLLNLEKLDLERCSAIHGGFVHLK 229
Query: 175 --------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+TD L+++ L L L L +++ G + LK +L LNL
Sbjct: 230 GLKKLKSLNVRCCRCITDSDLKTISGLIDLNELQLSNCNITDSGISYLKGLHKLRMLNLE 289
Query: 221 WTGVTK--LPNISSLECL---NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 275
VT L +IS+L L NL+ C++ EG + + L + + F +A L
Sbjct: 290 GCNVTASCLQSISALVALAYLNLNRCSLSD--EGCDKFSGLTNLKVLSLGFNEITDACLM 347
Query: 276 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
+L + +LE L+L S IGD+ + +A + +L+NL LS+
Sbjct: 348 --------------------YLKGLTSLESLNLDSCKIGDEGLANLAGL-THLKNLELSD 386
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
T S G+ L+G L NLE L+LS T + D ++ +S + SLK + N D + Q
Sbjct: 387 TEVGSNGLRHLSG-LKNLESLNLSFTLVTDSSLKRLSGLTSLKSL---NLDAR---QITD 439
Query: 396 AETDLVLSLTALQNL------------NHLERL-NLEQTQVSDATLFP--LSTFKELIHL 440
A + SLT L +L NHL+ NL+ ++ L + K+L+ L
Sbjct: 440 AGLAAITSLTGLTHLDLFGARISDSGANHLKYFKNLQSLEICGGGLTDAGVKNIKDLVCL 499
Query: 441 SL----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+ +N +LT+ SL +S L+ L +L++ ++ +TN GL KP ++L+ L L
Sbjct: 500 TWLNISQNCNLTNKSLELISGLTALVSLNVSNSRITNEGLQHLKPLKNLRSLTLE 554
>gi|357468127|ref|XP_003604348.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355505403|gb|AES86545.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 573
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 201/421 (47%), Gaps = 43/421 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R +S+ A+ M+ L L++ C + + L G+T L+ L++ C
Sbjct: 177 NLTSLSFRRNDSISAQGMSAFSRLVNLVKLDLERCPGIHGGTV-HLQGLTKLESLNMKWC 235
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K L +++L L +S + +T GI+ L LQ L++L+L G VT L SL
Sbjct: 236 NCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLS 295
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSN 240
L L L+L +S+RG +L LNL + + + ++ LE LNL +
Sbjct: 296 ELPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDS 355
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I EG EN LAG + + +E LS +V N L L+ +
Sbjct: 356 CKIGD--EGLEN--------LAG------HKQLICLE---LSDTEVGNHGLEH---LSGL 393
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+LE ++LS +++ D + + C ++L++LNL + + AG+ L L L L L G
Sbjct: 394 SSLEKINLSFTVVSDSGLRKL-CGLSSLKSLNLDAYQITDAGLATLT-SLTGLTDLDLFG 451
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I D +Y+ +L+ ++I + G + G + ++ L+ L LNL Q
Sbjct: 452 ARITDVGTNYLKKFKNLRSLEICS----GGLTDAGVKN--------IKELSSLMCLNLSQ 499
Query: 421 -TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
+ ++D T+ ++ L+ L+L N +T L L +L L +L++ +T + + F
Sbjct: 500 NSNLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLESCKVTANDIKKF 559
Query: 480 K 480
K
Sbjct: 560 K 560
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 215/478 (44%), Gaps = 58/478 (12%)
Query: 37 LPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENS-VDAEWMAYL---GAFRYL 92
LP ++ +L +L+ R + LE F+ A GE + VD WM + G+
Sbjct: 76 LPRDISQQILNNLVYSRRLTGDSLEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLLS 135
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK--VTDAGMKHLLSISTLEKLWLSET 150
L+ +D VT L L L L+L+ C K + D + +L S+S +
Sbjct: 136 VDLSASD---VTDFGLTYLQDCRSLISLNLNYCDKFQIMDWSLSNLTSLS-----FRRND 187
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLK 209
++A G++ S L NL LDL P LQ LTKLE L++ W + +++ L
Sbjct: 188 SISAQGMSAFSRLVNLVKLDLERCPGIHGGTVHLQGLTKLESLNMKWCNCITDSDIKPLS 247
Query: 210 MFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAG 263
L+ L ++ + G++ L + L LNL C + S A L +S L
Sbjct: 248 ELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTS--------ACLDSLSELPA 299
Query: 264 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 323
+ +N L+ ++S+ RF L ++K L +L + IGD + +
Sbjct: 300 LSNLN------------LNRCNISDRGCERFSRLEKLKVL---NLGFNDIGDRCLAHMKG 344
Query: 324 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
+ L +LNL + + G+ LAGH L L LS T++ ++ + ++S + SL+ I++S
Sbjct: 345 L-TKLESLNLDSCKIGDEGLENLAGH-KQLICLELSDTEVGNHGLEHLSGLSSLEKINLS 402
Query: 384 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
T + G L L L+ L+ LNL+ Q++DA L L++ L L L
Sbjct: 403 FT----VVSDSG--------LRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLF 450
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
A +TDV + L L +L I LT++G+ + K SL L+L LT+ +
Sbjct: 451 GARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 508
>gi|46447096|ref|YP_008461.1| hypothetical protein pc1462 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400737|emb|CAF24186.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 870
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 219/440 (49%), Gaps = 43/440 (9%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L ++ + +A+L LR L ++DCR +T + L LT +T LK LDLS C
Sbjct: 437 QHLDLSKCENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKN 496
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-----GLPVTDLVL 181
+TD G+ HL S+ L+ L L LT G+A L+SL L LDLG +TD L
Sbjct: 497 LTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTSLTALEHLDLGLDFGYCQNLTDDGL 556
Query: 182 RSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLE 234
L LT L++LDL W +++ G A L L L+L+W G+ L + +L+
Sbjct: 557 AHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYLTPLVALQ 616
Query: 235 CLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL-LSFLDVSNS-SL 291
L+L I D LE + + L +SL I ++ T + L LD+S SL
Sbjct: 617 YLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLTTLVNLEHLDLSGCYSL 676
Query: 292 SRF--CFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILA 347
S F FL+ + L+HL+LS + D +E + + NL+ L+LS+ + G+ L
Sbjct: 677 SSFKLIFLSSLVNLQHLNLSGCFGLYHDGLEDLTPL-MNLQYLDLSSCINLTDKGLAYLT 735
Query: 348 GHLP-NLEILSLSGT-QIDDYAISYMSMMPSLKFIDIS---NTDIKGFIQQVGAETDLVL 402
+ L+ L LSG +I D +++++ + L+++D+S N KG
Sbjct: 736 SLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSWCENLTDKG------------- 782
Query: 403 SLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSK 460
L L + L+ LNL+ +++DA L L++ L L+L +LTD L L SL
Sbjct: 783 -LAYLTSFAGLKYLNLKGCKKITDAGLAHLTSLVTLQRLNLSECVNLTDTGLAHLVSLVN 841
Query: 461 LTNLSIRDA-VLTNSGLGSF 479
L +L +R+ +T++GL +
Sbjct: 842 LQDLELRECKSITDTGLAHY 861
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 219/448 (48%), Gaps = 45/448 (10%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L++L++++C + + L L+ +T L+ LDLS C +TDAG+ HL + +L
Sbjct: 377 LAHLTSLTALQNLDLSECYLLKDTGLAHLSSLTALQYLDLSGCDDLTDAGLAHLTPLVSL 436
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ- 199
+ L LS+ LT DG+A L+ L L L L +TD L L LT L++LDL +
Sbjct: 437 QHLDLSKCENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKN 496
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+++ G L L +L NL G+ L ++++LE L+L +D N
Sbjct: 497 LTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTSLTALEHLDLG---LDFGYCQNLTD 553
Query: 254 APLAKI-SLAGTTFI------NEREAFLYIETSL--LSFLDVS---NSSLSRFCFLTQMK 301
LA + SL + N +A L TSL L LD+S N + +LT +
Sbjct: 554 DGLAHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYLTPLV 613
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP---NLEILSL 358
AL++L L S I D+ +E +A + A LR+L+L++ R G G+ HL NLE L L
Sbjct: 614 ALQYLSLKGSDITDEGLEHLAHLSA-LRHLSLNDCRRIYHGYGL--AHLTTLVNLEHLDL 670
Query: 359 SGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
SG + + + ++S + +L+ +++S G D + LT L NL +L+ +
Sbjct: 671 SGCYSLSSFKLIFLSSLVNLQHLNLSGC--------FGLYHDGLEDLTPLMNLQYLDLSS 722
Query: 418 LEQTQVSDATLFPLSTFK--ELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIR-DAVLTN 473
++D L L++ L HL L +TD L L+SL L L + LT+
Sbjct: 723 C--INLTDKGLAYLTSLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSWCENLTD 780
Query: 474 SGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
GL LK L+L G +T+ +
Sbjct: 781 KGLAYLTSFAGLKYLNLKGCKKITDAGL 808
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 192/428 (44%), Gaps = 50/428 (11%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ LN++ T + AL LK L L D G+ HL S++ L+ L LSE
Sbjct: 336 IEELNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQNLDLSECY 395
Query: 152 LTAD-GIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL 208
L D G+A LSSL L LDL G +TD L L L L++LDL + ++ G A L
Sbjct: 396 LLKDTGLAHLSSLTALQYLDLSGCDDLTDAGLAHLTPLVSLQHLDLSKCENLTGDGLAHL 455
Query: 209 KMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA 262
L L NL G+ L +++L+ L+LS C ++
Sbjct: 456 TPLVALRHLGLSDCRNLTDAGLAHLTPLTALKHLDLSEC---------------KNLTDD 500
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-----IGDDS 317
G ++ A Y+ L +++++ L+ LT + ALEHLDL + DD
Sbjct: 501 GLVHLSSLVALQYLSLKLCE--NLTDAGLAH---LTSLTALEHLDLGLDFGYCQNLTDDG 555
Query: 318 VEMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMP 375
+ ++ + A L++L+LS + AG+ L L L+ L LS + + D ++Y++ +
Sbjct: 556 LAHLSSLTA-LKHLDLSWRENLTDAGLAHLTS-LTALKHLDLSWCENLTDEGLAYLTPLV 613
Query: 376 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 435
+L+++ + +DI G E L L L HL LN + L L+T
Sbjct: 614 ALQYLSLKGSDIT----DEGLE-----HLAHLSALRHLS-LNDCRRIYHGYGLAHLTTLV 663
Query: 436 ELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGG 493
L HL L SL+ L LSSL L +L++ L + GL P +L+ LDL
Sbjct: 664 NLEHLDLSGCYSLSSFKLIFLSSLVNLQHLNLSGCFGLYHDGLEDLTPLMNLQYLDLSSC 723
Query: 494 WLLTEDAI 501
LT+ +
Sbjct: 724 INLTDKGL 731
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 182/423 (43%), Gaps = 87/423 (20%)
Query: 36 RLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSL 95
+L +L D+ L HL L +H ++ ++ + +A+L + L+ L
Sbjct: 517 KLCENLTDAGLAHLTS--------LTALEHLDLGLDFGYCQNLTDDGLAHLSSLTALKHL 568
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
+++ +T + L LT +T LK LDLS C +TD G+ +L + L+ L L + +T +
Sbjct: 569 DLSWRENLTDAGLAHLTSLTALKHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDE 628
Query: 156 G---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
G +A LS+L++LS+ D + L L L LE+LDL G L F
Sbjct: 629 GLEHLAHLSALRHLSLNDCRRI-YHGYGLAHLTTLVNLEHLDL-------SGCYSLSSF- 679
Query: 213 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 272
+L FL+ ++ +L+ LNLS C +G E+ PL
Sbjct: 680 KLIFLS----------SLVNLQHLNLSGC-FGLYHDGLEDLTPLMN-------------- 714
Query: 273 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 332
L +LD+S+ C K L +L + VG L++L+
Sbjct: 715 --------LQYLDLSS------CINLTDKGLAYL--------------TSLVGLGLQHLD 746
Query: 333 LSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGF 390
LS + + G+ L L LE L LS + + D ++Y++ LK++ ++KG
Sbjct: 747 LSGCKEITDTGLAHLTS-LVGLEYLDLSWCENLTDKGLAYLTSFAGLKYL-----NLKGC 800
Query: 391 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTD 449
+ A + SL LQ LN E +NL +D L L + L L LR S+TD
Sbjct: 801 KKITDAGLAHLTSLVTLQRLNLSECVNL-----TDTGLAHLVSLVNLQDLELRECKSITD 855
Query: 450 VSL 452
L
Sbjct: 856 TGL 858
>gi|46446667|ref|YP_008032.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400308|emb|CAF23757.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 662
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 235/501 (46%), Gaps = 68/501 (13%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLI---FPSLLEVFKHNAEAIELRGENSVDAEWMAYL 86
QR L L +L +++ L+ + + F ++ F + + + L + +A ++A L
Sbjct: 187 QRCQLNTLKNYLEFTVVSELLNKAFLSDEFGRIINHFSNEIKILNLPNKILNNACFLA-L 245
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ L+ L+ +CR +T + L LT +T L+ L L +C ++T+AG+ HL ++ L+ L
Sbjct: 246 KSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTALQYLN 305
Query: 147 LSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
LSE LT G+A L+ L L L L G +TD L L L L++LDL G Q
Sbjct: 306 LSEYKNLTDAGLAHLTPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQ----- 360
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 264
NL G+ L ++ L+ LNLS C K++ AG
Sbjct: 361 -------------NLTDAGLAHLTPLTGLQHLNLSRCN---------------KLTDAGL 392
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVA 322
+ +++ S N + + LT + L+HLDLS D+ +
Sbjct: 393 AHLTPLTGLQHLDLS-----GCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTP 447
Query: 323 CVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFI 380
G L++LNL N R F+ G+ L L L+ L+LS ++ D +++++ + +L+ +
Sbjct: 448 LTG--LQHLNLCNCRKFTDNGLAHLTP-LSVLQHLNLSRCNKLTDVGLAHLTPLTALQHL 504
Query: 381 DISN----TDIK-------GFIQQVGAETDLVLS---LTALQNLNHLERLNLEQTQ-VSD 425
D+S+ TD+ +Q +G + L+ L L+ L L+ LNL + ++D
Sbjct: 505 DLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDAGLVHLKLLTGLQHLNLSNCKNLTD 564
Query: 426 ATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPR 483
A L L+ L +L L LTD L L+SL+ L +L +R LT++GL P
Sbjct: 565 AGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTALQHLDLRYCQNLTDAGLAHLTPLT 624
Query: 484 SLKLLDLHGGWLLTEDAILQF 504
L+ LDL W LT+ + +F
Sbjct: 625 GLRHLDLSQCWRLTKAGLARF 645
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 147/328 (44%), Gaps = 63/328 (19%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G ++ +A+L L+ LN++ C ++T + L LT +T L+ LDLS C
Sbjct: 352 QHLDLSGCQNLTDAGLAHLTPLTGLQHLNLSRCNKLTDAGLAHLTPLTGLQHLDLSGCQN 411
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL--------GGLP--- 175
+TDAG+ HL ++ L+ L LS LT G+A L+ L L L+L GL
Sbjct: 412 LTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKFTDNGLAHLT 471
Query: 176 ---------------VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLN- 218
+TD+ L L LT L++LDL +++ G A L L L
Sbjct: 472 PLSVLQHLNLSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGL 531
Query: 219 -----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L G+ L ++ L+ LNLSNC ++ AG + A
Sbjct: 532 ISCDKLTDAGLVHLKLLTGLQHLNLSNC---------------KNLTDAGLAHLTPLTAL 576
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNL 331
Y+ + ++++ L+ LT + AL+HLDL D+ + G LR+L
Sbjct: 577 QYLYLNWCR--KLTDAGLAH---LTSLTALQHLDLRYCQNLTDAGLAHLTPLTG--LRHL 629
Query: 332 NLSNT-RFSSAGVG---ILAGHLPNLEI 355
+LS R + AG+ LA L NLEI
Sbjct: 630 DLSQCWRLTKAGLARFKTLAASL-NLEI 656
>gi|46447560|ref|YP_008925.1| hypothetical protein pc1926 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401201|emb|CAF24650.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 761
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 245/482 (50%), Gaps = 59/482 (12%)
Query: 54 LIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
L + +L +H ++LRG + + +++L L+ L+++ C +T + L L
Sbjct: 287 LAYLEILTALQH----LDLRGCDKITDAGLSHLTPLVALQYLSLSQCWNLTDAGLIHLKP 342
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 172
+T L+ L+LSRC K+TDAG++HL +++L+ L LS LT G+A L+ L L LDL
Sbjct: 343 LTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLDLS 402
Query: 173 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 224
+TD L L LT L+YL+L ++N G L L +LNL+ G+
Sbjct: 403 ICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGL 462
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
L +++L+ L+LS C K++ AG + Y++ S + L
Sbjct: 463 EHLTPLTALQQLDLSWC---------------YKLTDAGFAHLTPLTGLQYLDLSHCNKL 507
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNT-RFSSAG 342
+++ L+ LT + AL++LDLS+ + + DD + + + A L++LNLS+ + + AG
Sbjct: 508 --TDAGLAH---LTPLTALQYLDLSNCIKLTDDGLAHLTPLMA-LQHLNLSSCYKLTDAG 561
Query: 343 VGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISN---------------TD 386
L+ L L+ L LS Q + D +++++ + +L+ +D+ TD
Sbjct: 562 FAHLSP-LTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTD 620
Query: 387 IKGF-IQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-R 443
++ ++ G TD L+ LT L L HL+ + E +++DA L L +L +L+L R
Sbjct: 621 LQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSSCE--KLTDAGLVHLKLLTDLQYLNLSR 678
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
+LTD L L+ L+ L +L +R + LT++GL P L+ LDL W LT+ ++
Sbjct: 679 CENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTGLQRLDLSQCWNLTDAGLI 738
Query: 503 QF 504
Sbjct: 739 HL 740
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 224/476 (47%), Gaps = 53/476 (11%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F E + + + + L + L++L++ C+ +T L LT +T
Sbjct: 185 FERIINHFSKKIERLNFSNQVYLTNAHLLALKDCKNLKALHLEACQALTDDGLEHLTLLT 244
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 174
L+ L+LSRC +TDAG+ HL ++ L+ L LS T G+A L L L LDL G
Sbjct: 245 ALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLDLRGC 304
Query: 175 -PVTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 224
+TD L L L L+YL L W +++ G LK L +LNL+ G+
Sbjct: 305 DKITDAGLSHLTPLVALQYLSLSQCWN--LTDAGLIHLKPLTALQYLNLSRCNKLTDAGL 362
Query: 225 TKLPNISSLECLNLSNCT--IDSILEGNENKAPLA-----------KISLAGTTFINERE 271
L ++SL+ LNLS+C D+ G + PL K++ G T +N
Sbjct: 363 EHLALLTSLQHLNLSSCKKLTDA---GLAHLTPLMALQHLDLSICNKLTDRGLTHLNPLT 419
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRN 330
A Y+ S +++N+ L LT AL++L+LS + D +E + + A L+
Sbjct: 420 ALQYLNLSQCD--NITNAGLEHLIPLT---ALQYLNLSQCEKLTDAGLEHLTPLTA-LQQ 473
Query: 331 LNLS-NTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIK 388
L+LS + + AG L L L+ L LS ++ D +++++ + +L+++D+SN
Sbjct: 474 LDLSWCYKLTDAGFAHLTP-LTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNC--- 529
Query: 389 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-S 446
+ D + LT L L H LNL +++DA LS L L L +
Sbjct: 530 -----IKLTDDGLAHLTPLMALQH---LNLSSCYKLTDAGFAHLSPLTALQRLDLSYCQN 581
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
LTD L L+ L+ L L +R LT++GL K L+ L+L G LT+ +
Sbjct: 582 LTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGL 637
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
R EN D E +A L L+ L + C +T + L LT +T L+ LDLS+C +TDAG
Sbjct: 678 RCENLTD-EGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTGLQRLDLSQCWNLTDAG 736
Query: 133 MKHLLSISTLEKLWLSETGLT 153
+ HL ++ L+ L LS+T ++
Sbjct: 737 LIHLKLLTALQHLNLSDTNIS 757
>gi|46446666|ref|YP_008031.1| hypothetical protein pc1032 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400307|emb|CAF23756.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 734
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 227/437 (51%), Gaps = 55/437 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ L+++DC ++T L LT +T L+ LDLS C +TDAG+ HL ++ L
Sbjct: 267 LAHLTPLTTLQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTAL 326
Query: 143 EKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL---WG 197
+ L L+ D G+A L+ L L L+L +TD L L+ LT L++L+L W
Sbjct: 327 QHLNLNRCEYLKDAGLAHLTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECW- 385
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNE 251
++++ G A L L L+L+ G+ L +++L+ L+LS+C N
Sbjct: 386 -KLTDAGLAHLTPLTALQHLDLSRCNSLTDAGLAHLTPLTALQHLDLSDCQ-------NF 437
Query: 252 NKAPLAKI-SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
A LA + SL G ++N E + +++++ L+ LT + AL+HL+L +
Sbjct: 438 TDAGLAHLTSLTGLQYLNLSE-----------YKNLTDAGLAH---LTPLTALQHLNLCN 483
Query: 311 S-MIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLS-GTQIDDYA 367
D+ + + + A L++L+LS+ + + G+ LA L L+ L LS ++ D
Sbjct: 484 CRKFTDNGLAHLTPLTA-LQHLDLSHCKNLTDDGLAHLAP-LTGLQRLVLSWCDKLTDAG 541
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDA 426
+++++ + +L+++D+S +I TD L+ LT L L HL + Q++DA
Sbjct: 542 LAHLTPLTALQYLDLSCCEI----------TDAGLAHLTPLTGLQHLVLVYCW--QLTDA 589
Query: 427 TLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRS 484
L L+ L +L L + + LTD L L+ L+ L +L++ D LT++GL P +
Sbjct: 590 GLAHLTPLTTLQYLYLGSCNRLTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTA 649
Query: 485 LKLLDLHGGWLLTEDAI 501
L+ L L+ LT+D +
Sbjct: 650 LQHLTLNRCEKLTDDGL 666
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 200/445 (44%), Gaps = 78/445 (17%)
Query: 67 AEAIELRGENSVDAEW--------MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLK 118
A L G +D W +A+L L+ LN+ C + + L LT +T L+
Sbjct: 293 AHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAGLAHLTPLTGLQ 352
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PV 176
L+L+RC +TDAG+ HL ++ L+ L LSE LT G+A L+ L L LDL +
Sbjct: 353 HLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSL 412
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKLPN 229
TD L L LT L++LDL Q ++ G A L L +LNL+ G+ L
Sbjct: 413 TDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTP 472
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+++L+ LNL NC F D
Sbjct: 473 LTALQHLNLCNCR---------------------------------------KFTD---- 489
Query: 290 SLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGILA 347
+ LT + AL+HLDLS + DD + +A + L+ L LS + + AG+ L
Sbjct: 490 --NGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPL-TGLQRLVLSWCDKLTDAGLAHLT 546
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 407
L L+ L LS +I D +++++ + L+ + + Q A + LT L
Sbjct: 547 P-LTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYC-----WQLTDAGLAHLTPLTTL 600
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 466
Q L +L N +++DA L L+ L HL+L + LTD L L+ L+ L +L++
Sbjct: 601 QYL-YLGSCN----RLTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTALQHLTL 655
Query: 467 -RDAVLTNSGLGSFKPPRSLKLLDL 490
R LT+ GL KP +L+ LDL
Sbjct: 656 NRCEKLTDDGLAHLKPLAALQYLDL 680
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 194/406 (47%), Gaps = 45/406 (11%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
R ++ DA +++L L+ LN+++C ++T + L LT +T L+ LDLSRC +TDAG
Sbjct: 358 RCKDLTDA-GLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSLTDAG 416
Query: 133 MKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKL 190
+ HL ++ L+ L LS+ T G+A L+SL L L+L +TD L L LT L
Sbjct: 417 LAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTAL 476
Query: 191 EYLDLWGS-QVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCTI 243
++L+L + ++ G A L L L NL G+ L ++ L+ L LS C
Sbjct: 477 QHLNLCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCD- 535
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
K++ AG + A Y++ LS +++++ L+ LT + L
Sbjct: 536 --------------KLTDAGLAHLTPLTALQYLD---LSCCEITDAGLAH---LTPLTGL 575
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLSGT- 361
+HL L D+ L+ L L S R + AG+ LA L L+ L+L+
Sbjct: 576 QHLVLVYCWQLTDAGLAHLTPLTTLQYLYLGSCNRLTDAGLAHLAP-LTALQHLALNDCR 634
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ D +++++ + +L+ + ++ + + G L L+ L L+ L+L
Sbjct: 635 KLTDTGLAHLTPLTALQHLTLNRCEK---LTDDG--------LAHLKPLAALQYLDLSYC 683
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
+++DA L L+ L L L +TD L + +L+ NL IR
Sbjct: 684 EITDAGLAHLTHLMALQRLDLYGREITDDGLERFETLAASFNLEIR 729
>gi|168057635|ref|XP_001780819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667754|gb|EDQ54376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 564
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 203/421 (48%), Gaps = 42/421 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + LR N + A M L++L++ C + ++ L G+T L++L++ C
Sbjct: 167 NLTTLSLRSSNLITAAGMRNFTNLVSLKNLDLERCPLIHGGFVY-LRGLTTLEKLNVGWC 225
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ V +A + HL I L++L +S + + G+A L + NL L + G P+T ++++
Sbjct: 226 IGVRNADITHLAGIVNLKELQISRSKVNDSGVASLKGMTNLRSLSMEGCPITAQSMKTIA 285
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSN 240
LT L +L++ + + G L+ L LNL + +G+ L +++LE LNL +
Sbjct: 286 GLTTLCHLNINSCYLPDSGCQKLEGLINLRTLNLGYNELTDSGMVFLKGLTNLERLNLDS 345
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C + G I + L + LS +V N L FL+ +
Sbjct: 346 CKV-------------------GDEGIKHVKGLLNLRMLDLSDSEVGNVGLR---FLSGL 383
Query: 301 KALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
K LE L+LS + + D + +A + +L +LNL + + + G+ L G L L+ L L
Sbjct: 384 KKLEILNLSFTGGVTDIGLSTIATI-TSLTSLNLDSKQITDTGLAALTG-LTGLKNLDLF 441
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
G +I DY ++ + +L+ +++ G I VG + L+L NL+H RL
Sbjct: 442 GAKITDYGMARLRHFKNLQSLELCG----GGITDVGVSSIKDLTLLTSLNLSHNLRL--- 494
Query: 420 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
+D +L LS + L+ L++ N+ +T+ L L L+KLT+L+++ +T + +
Sbjct: 495 ----TDRSLQYLSGMENLVSLNVANSKVTNAGLQHLRPLTKLTSLALQGCKVTRTAVDHL 550
Query: 480 K 480
K
Sbjct: 551 K 551
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 236/516 (45%), Gaps = 68/516 (13%)
Query: 22 ESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-EAIELRGENSVDA 80
+++ K + +S +P L +L L+R++L+ P LE+F A + + L V+
Sbjct: 47 QNIVKNIDKYKSFSGVPRDLIQQVLNDLVRKQLLSPVTLELFSDCALQDVLLADYPGVED 106
Query: 81 EWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
W+ +G+ L +L+++ VT L L T L+ L L+ C ++D G+ L +
Sbjct: 107 FWLDIIGSQGESLLALDISG-SPVTDDGLACLQSCTNLQTLSLNSCDHISDEGLSVLSGL 165
Query: 140 STLEKLWLSETGL-TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WG 197
S L L L + L TA G+ ++L +L LDL P+ L+ LT LE L++ W
Sbjct: 166 SNLTTLSLRSSNLITAAGMRNFTNLVSLKNLDLERCPLIHGGFVYLRGLTTLEKLNVGWC 225
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCTIDSILEGNEN 252
V N L L L ++ +GV L +++L L++ C I + ++
Sbjct: 226 IGVRNADITHLAGIVNLKELQISRSKVNDSGVASLKGMTNLRSLSMEGCPITA-----QS 280
Query: 253 KAPLAKISLAGTTFIN----------EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
+A ++ IN + E + + T L + ++++S + FL +
Sbjct: 281 MKTIAGLTTLCHLNINSCYLPDSGCQKLEGLINLRTLNLGYNELTDSGM---VFLKGLTN 337
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT- 361
LE L+L S +GD+ ++ V + NLR L+LS++ + G+ L+G L LEIL+LS T
Sbjct: 338 LERLNLDSCKVGDEGIKHVKGL-LNLRMLDLSDSEVGNVGLRFLSG-LKKLEILNLSFTG 395
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+ D +S ++ + SL +++ + I TD L AL L L+ L+L
Sbjct: 396 GVTDIGLSTIATITSLTSLNLDSKQI----------TD--TGLAALTGLTGLKNLDLFGA 443
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDV-------------------------SLHQLS 456
+++D + L FK L L L +TDV SL LS
Sbjct: 444 KITDYGMARLRHFKNLQSLELCGGGITDVGVSSIKDLTLLTSLNLSHNLRLTDRSLQYLS 503
Query: 457 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+ L +L++ ++ +TN+GL +P L L L G
Sbjct: 504 GMENLVSLNVANSKVTNAGLQHLRPLTKLTSLALQG 539
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 175/392 (44%), Gaps = 64/392 (16%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQV 200
+E WL G S ++L LD+ G PVTD L LQ T L+ L L +
Sbjct: 104 VEDFWLDIIG---------SQGESLLALDISGSPVTDDGLACLQSCTNLQTLSLNSCDHI 154
Query: 201 SNRGAAVLKMFPRLSFLNL------AWTGVTKLPNISSLECLNLSNCTIDSILEGN---- 250
S+ G +VL L+ L+L G+ N+ SL+ L+L C ++ G
Sbjct: 155 SDEGLSVLSGLSNLTTLSLRSSNLITAAGMRNFTNLVSLKNLDLERC---PLIHGGFVYL 211
Query: 251 ENKAPLAKISLAGTTFINERE-----AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE- 304
L K+++ + + + ++ +S V++S ++ +T +++L
Sbjct: 212 RGLTTLEKLNVGWCIGVRNADITHLAGIVNLKELQISRSKVNDSGVASLKGMTNLRSLSM 271
Query: 305 --------------------HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
HL+++S + D + + + NLR LNL + +G+
Sbjct: 272 EGCPITAQSMKTIAGLTTLCHLNINSCYLPDSGCQKLEGL-INLRTLNLGYNELTDSGMV 330
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 404
L G L NLE L+L ++ D I ++ + +L+ +D+S++++ VG L
Sbjct: 331 FLKG-LTNLERLNLDSCKVGDEGIKHVKGLLNLRMLDLSDSEVG----NVG--------L 377
Query: 405 TALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L LE LNL T V+D L ++T L L+L + +TD L L+ L+ L N
Sbjct: 378 RFLSGLKKLEILNLSFTGGVTDIGLSTIATITSLTSLNLDSKQITDTGLAALTGLTGLKN 437
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
L + A +T+ G+ + ++L+ L+L GG +
Sbjct: 438 LDLFGAKITDYGMARLRHFKNLQSLELCGGGI 469
>gi|195647464|gb|ACG43200.1| regulatory subunit [Zea mays]
Length = 581
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 196/429 (45%), Gaps = 66/429 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++A G++ L L L L+L
Sbjct: 230 KGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----- 226
G VT + L + L L L+L + + G LK +L L+L + +T
Sbjct: 290 EGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIH 349
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
L ++ +LECLNL +C I G+E L + + ++ LS +V
Sbjct: 350 LKDLVNLECLNLDSCKI-----GDEGLFHL--------------KGLIQLKNLELSDTEV 390
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
++ L L+ ++ L+ ++LS +++ D ++ ++ + ++L++LNL N + + G+ L
Sbjct: 391 GSNGLRH---LSGLRNLQSINLSFTLVTDIGLKKISGL-SSLKSLNLDNRQITDTGLASL 446
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
G L L L L G +I D +S +++ +++ G I G +
Sbjct: 447 TG-LTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCG----GLITDAGVKN-------- 493
Query: 407 LQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
+++L L LNL Q +++D TL +S L+ L++ N+ ++++ LH L L L +LS
Sbjct: 494 IKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNLGLHHLKPLQNLRSLS 553
Query: 466 IRDAVLTNS 474
+ +T S
Sbjct: 554 LESCRVTAS 562
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 145/542 (26%), Positives = 231/542 (42%), Gaps = 96/542 (17%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFK 64
R LV LC+ C K L LP L+ + L+ + + L F+
Sbjct: 55 RCPSLVELCVAKVC-------KDINMYSDLSLLPRDLSQQIFNELVECGCLTEASLGAFR 107
Query: 65 H-NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDL 122
+ + I L V WM + + + L S++++ C V S L + ++ L
Sbjct: 108 DCDLQDICLGDYPGVTDAWMEVVASQGQSLLSVDLS-CSDVIDSGFNLLKDCSSMQNLAC 166
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDL-------GGL 174
C ++++ G+K L S L L + + +TA+G ++L NL LDL GGL
Sbjct: 167 DYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGL 226
Query: 175 ------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+TD ++ L LT L L L ++S G + L+ +L
Sbjct: 227 IHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGH 286
Query: 217 LNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
LNL VT + ++SL LNLS C I EG EN L K+ F +
Sbjct: 287 LNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKLKALSLGFNQITD 344
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
A L L + LE L+L S IGD+ + + + L+NL
Sbjct: 345 ACLI--------------------HLKDLVNLECLNLDSCKIGDEGLFHLKGL-IQLKNL 383
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N I
Sbjct: 384 ELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI---- 438
Query: 392 QQVGAETDLVLSLTALQNLNHLERL----------------NLEQTQV-----SDATLFP 430
+T L SLT L L HL+ N++ +V +DA +
Sbjct: 439 ----TDTGLA-SLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLITDAGVKN 493
Query: 431 LSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
+ K L L+L +N LTD +L +S L+ L +L++ ++ ++N GL KP ++L+ L
Sbjct: 494 IKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNLGLHHLKPLQNLRSLS 553
Query: 490 LH 491
L
Sbjct: 554 LE 555
>gi|255088361|ref|XP_002506103.1| predicted protein [Micromonas sp. RCC299]
gi|226521374|gb|ACO67361.1| predicted protein [Micromonas sp. RCC299]
Length = 610
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 212/467 (45%), Gaps = 58/467 (12%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL ++ LR + ++L N +I L G ++ + L A L SL+V++
Sbjct: 131 HLTEANLRSYPGLTDDWLAVLATSAPNLSSINLSGCAALTPDGFNALAACVELESLDVSE 190
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
C V +AL A+ M+ L+ L + C +T AG++++ + L + L +G+
Sbjct: 191 CPGVNDNALAAVASMSRLRRLACAGCDGITGAGLRYVSGATKLRCVNLERCNGLTNGLVY 250
Query: 160 LSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
LS L L LD G D + SL+ L KL++L+L ++V ++G A + L LN
Sbjct: 251 LSGLTELERLDAGWCNHVDSNDVTSLRSLKKLKHLNLARTKVDDQGVATIGSLSALETLN 310
Query: 219 LA------------------------WT-----GVTKLPNISSLECLNLSNCTIDSILEG 249
LA W GV +L +++ LE LNL ++ EG
Sbjct: 311 LAGCRITDGACFLLGGLTALKELSLEWCRVGDGGVRRLASLAKLEVLNLGYSSVTD--EG 368
Query: 250 NENKAPLAKI-------SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
++ APL K+ G + +E LS V N L R LT+++
Sbjct: 369 VQHLAPLVKLREIDLDSCQVGDDACKALAEWPNLEDVNLSDTAVGNLGLKRISKLTRLR- 427
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
++LS S + DD V M A++R+L+L + G+G LA L ++E L L G +
Sbjct: 428 --RVNLSYSNVSDDGV-MYLENAASIRSLSLDTRMVTDEGLGYLA-KLKDIEELDLFGAR 483
Query: 363 IDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
I D ++ MP LK +++ I ++ +G D LT LNL Q
Sbjct: 484 ITDEGAKHLRHMPRLKTLELCGGGITDAGVKHIG---DACRELTL---------LNLGQN 531
Query: 422 -QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
++SDA + L +L L+L+ + +++ + QLS LS LT L+++
Sbjct: 532 FRISDAAVPFLLQLHKLGSLNLQYSRISNEGVTQLSQLSNLTTLALK 578
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 220/489 (44%), Gaps = 48/489 (9%)
Query: 31 RRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF--KHNAEAIELRGENSVDAEWMAYLG- 87
R L LP+ L+ + L++ R + + F H EA LR + +W+A L
Sbjct: 95 RVDLSVLPSDLSQRVFEDLVQTRRLTARVTGDFIGCHLTEA-NLRSYPGLTDDWLAVLAT 153
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L S+N++ C +T AL L+ LD+S C V D + + S+S L +L
Sbjct: 154 SAPNLSSINLSGCAALTPDGFNALAACVELESLDVSECPGVNDNALAAVASMSRLRRLAC 213
Query: 148 SET-GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGA 205
+ G+T G+ +S L ++L L L LT+LE LD W + V +
Sbjct: 214 AGCDGITGAGLRYVSGATKLRCVNLERCNGLTNGLVYLSGLTELERLDAGWCNHVDSNDV 273
Query: 206 AVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
L+ +L LNLA T GV + ++S+LE LNL+ C I +G A
Sbjct: 274 TSLRSLKKLKHLNLARTKVDDQGVATIGSLSALETLNLAGC---RITDG-------ACFL 323
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
L G T + E L + V + + R L + LE L+L S + D+ V+
Sbjct: 324 LGGLTALKELS---------LEWCRVGDGGVRR---LASLAKLEVLNLGYSSVTDEGVQH 371
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
+A + LR ++L + + LA PNLE ++LS T + + + +S + L+ +
Sbjct: 372 LAPL-VKLREIDLDSCQVGDDACKALA-EWPNLEDVNLSDTAVGNLGLKRISKLTRLRRV 429
Query: 381 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
++S +++ D V+ L +N + L+L+ V+D L L+ K++ L
Sbjct: 430 NLSYSNVS---------DDGVMYL---ENAASIRSLSLDTRMVTDEGLGYLAKLKDIEEL 477
Query: 441 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP-RSLKLLDLHGGWLLTED 499
L A +TD L + +L L + +T++G+ R L LL+L + +++
Sbjct: 478 DLFGARITDEGAKHLRHMPRLKTLELCGGGITDAGVKHIGDACRELTLLNLGQNFRISDA 537
Query: 500 AILQFCKMH 508
A+ ++H
Sbjct: 538 AVPFLLQLH 546
>gi|388500850|gb|AFK38491.1| unknown [Medicago truncatula]
Length = 577
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 199/421 (47%), Gaps = 43/421 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R +S+ A+ M+ L L++ C + + L G+T L+ L++ C
Sbjct: 181 NLTSLSFRRNDSISAQGMSAFSRLVNLVKLDLERCPGIHGGTVH-LQGLTKLESLNMKWC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K L +++L L +S + +T GI+ L LQ L++L+L G VT L SL
Sbjct: 240 NCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLS 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSN 240
L L L+L +S RG +L LNL + + + ++ LE LNL +
Sbjct: 300 ELPALSNLNLNRCNISGRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDS 359
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I EG EN LAG + + +E LS +V N L L+ +
Sbjct: 360 CKIGD--EGLEN--------LAG------HKQLICLE---LSDTEVGNHGLEH---LSGL 397
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+LE ++LS +++ D + + C ++L++LNL + + AG+ L L L L L G
Sbjct: 398 SSLEKINLSFTVVSDSGLRKL-CGLSSLKSLNLDAYQITDAGLATLT-SLTGLTDLDLFG 455
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I D +Y+ +L+ ++I + G + G + ++ L+ L LNL Q
Sbjct: 456 ARITDVGTNYLKKFKNLRPLEICS----GGLTDAGVKN--------IKELSSLMCLNLSQ 503
Query: 421 -TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
+ ++D T+ ++ L+ L+L N +T L L +L L L++ +T + + F
Sbjct: 504 NSNLTDKTVELIAGLTALVSLNLSNTRITFAGLQHLKTLKNLRFLTLESCKVTVNDIKKF 563
Query: 480 K 480
K
Sbjct: 564 K 564
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 218/477 (45%), Gaps = 52/477 (10%)
Query: 37 LPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENS-VDAEWMAYL---GAFRYL 92
LP ++ +L +L+ R + LE F+ A GE + VD WM + G+
Sbjct: 76 LPRDISQQILNNLVYSRRLTGDSLEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLLS 135
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETG 151
L+ +D VT L L L L+L+ C +++D G++ + +S L L +
Sbjct: 136 VDLSASD---VTDFGLTYLQDCRSLISLNLNYCDQISDHGLECISGLSNLTSLSFRRNDS 192
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKM 210
++A G++ S L NL LDL P LQ LTKLE L++ W + +++ L
Sbjct: 193 ISAQGMSAFSRLVNLVKLDLERCPGIHGGTVHLQGLTKLESLNMKWCNCITDSDIKPLSE 252
Query: 211 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGT 264
L+ L ++ + G++ L + L LNL C + S A L +S L
Sbjct: 253 LASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTS--------ACLDSLSELPAL 304
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+ +N L+ ++S RF ++++ L+ L+L + IGD + + +
Sbjct: 305 SNLN------------LNRCNISGRGCERF---SRLEKLKVLNLGFNDIGDRCLAHMKGL 349
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
L +LNL + + G+ LAGH L L LS T++ ++ + ++S + SL+ I++S
Sbjct: 350 -TKLESLNLDSCKIGDEGLENLAGH-KQLICLELSDTEVGNHGLEHLSGLSSLEKINLSF 407
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
T + G L L L+ L+ LNL+ Q++DA L L++ L L L
Sbjct: 408 T----VVSDSG--------LRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFG 455
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
A +TDV + L L L I LT++G+ + K SL L+L LT+ +
Sbjct: 456 ARITDVGTNYLKKFKNLRPLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 512
>gi|226501144|ref|NP_001141453.1| uncharacterized protein LOC100273563 [Zea mays]
gi|194704638|gb|ACF86403.1| unknown [Zea mays]
gi|414586493|tpg|DAA37064.1| TPA: regulatory subunit [Zea mays]
Length = 581
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 195/429 (45%), Gaps = 66/429 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++A G++ L L L L+L
Sbjct: 230 KGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----- 226
G VT + L + L L L+L + + G LK +L L+L + +T
Sbjct: 290 EGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIH 349
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
L ++ +LECLNL +C I G+E L + + ++ LS +V
Sbjct: 350 LKDLVNLECLNLDSCKI-----GDEGLFHL--------------KGLIQLKNLELSDTEV 390
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
++ L L+ ++ L+ ++LS +++ D ++ ++ + ++L++LNL N + + G+ L
Sbjct: 391 GSNGLRH---LSGLRNLQSINLSFTLVTDIGLKKISGL-SSLKSLNLDNRQITDTGLASL 446
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
G L L L L G +I D +S +++ +++ G I G +
Sbjct: 447 TG-LTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCG----GLITDAGVKN-------- 493
Query: 407 LQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
+++L L LNL Q +++D TL +S L+ L++ N+ +++ LH L L L +LS
Sbjct: 494 IKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLS 553
Query: 466 IRDAVLTNS 474
+ +T S
Sbjct: 554 LESCRVTAS 562
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 233/542 (42%), Gaps = 96/542 (17%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFK 64
R LV LC+ C K L LP L+ + L+ + + L F+
Sbjct: 55 RCPSLVELCVAKVC-------KDINMYSDLSLLPRDLSQQIFNELVECGCLTEASLGAFR 107
Query: 65 H-NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDL 122
+ + I L V WM + + + L S++++ C VT S L + ++ L
Sbjct: 108 DCDLQDICLGDYPGVTDAWMEVVASQGQSLLSVDLS-CSDVTDSGFNLLKDCSSMQSLAC 166
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDL-------GGL 174
C ++++ G+K L S L L + + +TA+G ++L NL LDL GGL
Sbjct: 167 DYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGL 226
Query: 175 ------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+TD ++ L LT L L L ++S G + L+ +L
Sbjct: 227 IHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGH 286
Query: 217 LNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
LNL VT + ++SL LNLS C I EG EN L K+ F +
Sbjct: 287 LNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKLKALSLGFNQITD 344
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
A L L + LE L+L S IGD+ + + + L+NL
Sbjct: 345 ACLI--------------------HLKDLVNLECLNLDSCKIGDEGLFHLKGL-IQLKNL 383
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N I
Sbjct: 384 ELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI---- 438
Query: 392 QQVGAETDLVLSLTALQNLNHLERL----------------NLEQTQV-----SDATLFP 430
+T L SLT L L HL+ N++ +V +DA +
Sbjct: 439 ----TDTGLA-SLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLITDAGVKN 493
Query: 431 LSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
+ K L L+L +N LTD +L +S L+ L +L++ ++ ++NSGL KP ++L+ L
Sbjct: 494 IKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLS 553
Query: 490 LH 491
L
Sbjct: 554 LE 555
>gi|115459280|ref|NP_001053240.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|113564811|dbj|BAF15154.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|215678755|dbj|BAG95192.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708842|dbj|BAG94111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629150|gb|EEE61282.1| hypothetical protein OsJ_15365 [Oryza sativa Japonica Group]
Length = 581
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 199/430 (46%), Gaps = 65/430 (15%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + ++V AE L SL++ C ++ L L G+ L++L+L C
Sbjct: 185 NVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYC 243
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G VT L +
Sbjct: 244 NGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVIS 303
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L V + G L+ +L LNL + +T L + +LECLNL +
Sbjct: 304 GLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDS 363
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I G+E A L + L + + LS +V ++ L L+ +
Sbjct: 364 CKI-----GDEGLAHL--------------KGLLKLRSLELSDTEVGSNGLRH---LSGL 401
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+ L+ ++LS +++ D ++ ++ + + LR+LNL N + + G+ L L L L L G
Sbjct: 402 RNLQSINLSFTLVTDIGLKKISGLNS-LRSLNLDNRQITDNGLAALTC-LTGLTHLDLFG 459
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I D + + +L+ +++ G I G + +++L L LNL Q
Sbjct: 460 ARITDAGTNCLKYFKNLQSLEVCG----GLITDAGVKN--------IKDLKALTLLNLSQ 507
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
N +LTD SL +S L+ L +L++ ++ ++NSGL K
Sbjct: 508 -----------------------NGNLTDKSLELISRLTALVSLNVSNSRVSNSGLHHLK 544
Query: 481 PPRSLKLLDL 490
P ++L+ L L
Sbjct: 545 PLQNLRSLSL 554
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 183/427 (42%), Gaps = 81/427 (18%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+ + + L + SL+ C VT+ A M L LDL RC K+ G+ H
Sbjct: 170 DQISEHGLKTLSGLSNVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKI-HGGLVH 228
Query: 136 LLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + LEKL L G+T + LS L NL L L ++DL + L+ L+KL +L+
Sbjct: 229 LKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLN 288
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA 254
L G V+ AA L++ + ++SL LNLS C + EG E+
Sbjct: 289 LEGCAVT---AACLEV----------------ISGLASLVLLNLSRCGVYD--EGCEHLE 327
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
L K+ + F YI + L L ++ LE L+L S IG
Sbjct: 328 GLVKLKVLNL-------GFNYITDACLVHL-------------KELINLECLNLDSCKIG 367
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
D+ + + + LR+L LS+T S G+ L+G L NL+ ++LS T + D + +S
Sbjct: 368 DEGLAHLKGL-LKLRSLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKIS-- 423
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
LN L LNL+ Q++D L L+
Sbjct: 424 ----------------------------------GLNSLRSLNLDNRQITDNGLAALTCL 449
Query: 435 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 494
L HL L A +TD + L L +L + ++T++G+ + K ++L LL+L
Sbjct: 450 TGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNG 509
Query: 495 LLTEDAI 501
LT+ ++
Sbjct: 510 NLTDKSL 516
>gi|242076388|ref|XP_002448130.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
gi|241939313|gb|EES12458.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
Length = 581
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 237/541 (43%), Gaps = 96/541 (17%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFK 64
R LV LC+ C E + ++ LP L+ + L+ + + L F+
Sbjct: 55 RCPSLVELCVAKVC---EDINRYS----DFSLLPRDLSQQIFNELVECGCLTEASLGAFR 107
Query: 65 HNA-EAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDL 122
A + + L V WM + + + L S++++ C VT S L + ++ L
Sbjct: 108 DCALQDVCLGDYPGVTDAWMEVVASQGQSLLSVDLS-CSDVTDSGFNLLKDCSSMQSLAC 166
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDL-------GGL 174
C K+++ G+K L S L L + + +TA+G ++L NL LDL GGL
Sbjct: 167 DYCDKISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKIHGGL 226
Query: 175 ------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+TD ++ L LT L L L ++S+ G + L+ +L
Sbjct: 227 IHLKGLKKLEKLNMRYCNCITDSDMKYLSDLTNLRELQLSSCKISDFGVSYLRGLHKLGH 286
Query: 217 LNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
LNL VT + ++SL LNLS C I EG EN L K+ F +
Sbjct: 287 LNLEGCSVTAACLEVISELASLVLLNLSRCGICD--EGCENLEGLTKLKALNLGFNHITG 344
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
A L L + +LE L+L S IGD+ + + + L++L
Sbjct: 345 ACLI--------------------HLKDLISLECLNLDSCKIGDEGLFHLKGL-IQLKSL 383
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N I
Sbjct: 384 ELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQI---- 438
Query: 392 QQVGAETDLVLSLTALQNLNHLERL----------------NLEQTQV-----SDATLFP 430
+T L SLT L L HL+ NL+ +V +DA +
Sbjct: 439 ----TDTGLA-SLTNLTGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCGGLITDAGVKN 493
Query: 431 LSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
+ K L L+L +N +LTD +L +S L+ L +L++ ++ ++NSGL KP +L+ L
Sbjct: 494 IKDLKALTLLNLSQNGNLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLLNLRSLS 553
Query: 490 L 490
L
Sbjct: 554 L 554
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 193/429 (44%), Gaps = 66/429 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DKISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKIHGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++ G++ L L L L+L
Sbjct: 230 KGLKKLEKLNMRYCNCITDSDMKYLSDLTNLRELQLSSCKISDFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----K 226
G VT L + L L L+L + + G L+ +L LNL + +T
Sbjct: 290 EGCSVTAACLEVISELASLVLLNLSRCGICDEGCENLEGLTKLKALNLGFNHITGACLIH 349
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
L ++ SLECLNL +C I G+E L + + +++ LS +V
Sbjct: 350 LKDLISLECLNLDSCKI-----GDEGLFHL--------------KGLIQLKSLELSDTEV 390
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
++ L L+ ++ L+ ++LS +++ D ++ ++ + ++L++LNL N + + G+ L
Sbjct: 391 GSNGLRH---LSGLRNLQSINLSFTLVTDIGLKKISGL-SSLKSLNLDNRQITDTGLASL 446
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
+L L L L G +I D ++ +L+ +++ G I G +
Sbjct: 447 T-NLTGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCG----GLITDAGVKN-------- 493
Query: 407 LQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
+++L L LNL Q ++D TL +S L+ L++ N+ +++ LH L L L +LS
Sbjct: 494 IKDLKALTLLNLSQNGNLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLLNLRSLS 553
Query: 466 IRDAVLTNS 474
+ +T S
Sbjct: 554 LESCRVTAS 562
>gi|356519276|ref|XP_003528299.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 1 [Glycine max]
Length = 577
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 204/421 (48%), Gaps = 43/421 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R +S+ A+ M+ L L++ C + L L G+T L+ L+L C
Sbjct: 181 NLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGI-HGGLVHLRGLTKLESLNLKWC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD MK L +++L+ L +S + +T GI+ L LQ L++L+L G VT L SL
Sbjct: 240 NCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLA 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L +S+ G + L LNL + +T L ++ LE LNL +
Sbjct: 300 ELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDS 359
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I G+E ++LAG +N E LS +V ++ L L+ +
Sbjct: 360 CKI-----GDE-----GLVNLAGLEQLNCLE---------LSDTEVGSNGLHH---LSGL 397
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+L+ ++LS +MI D S+ ++ ++L++LNL + + AG+ L L L L L G
Sbjct: 398 SSLQKINLSFTMISDSSLRKLS-GLSSLKSLNLDAYQITDAGLANLT-SLTGLTDLDLFG 455
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I D+ +Y+ +L+ ++I G + G + ++ L+ L LNL Q
Sbjct: 456 ARITDFGTNYLKKFKNLRSLEICG----GVLTDAGVKN--------IKELSSLVCLNLSQ 503
Query: 421 -TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
+ ++D TL +S L+ L++ N+ +T+ L L +L L +L++ +T + +
Sbjct: 504 NSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKL 563
Query: 480 K 480
K
Sbjct: 564 K 564
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 233/493 (47%), Gaps = 71/493 (14%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA- 67
L+ LCI+ + E + K+ + LP ++ + +L+ R + + LE F+ A
Sbjct: 55 LLDLCIQ---KINEDIDKYN----TFSMLPRDISQLIFNNLVYSRRLTSASLEAFRDCAL 107
Query: 68 EAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
+ + L + V+ WM + + L S++++ VT L L L L+L+ C
Sbjct: 108 QDLYLGEYDGVNDNWMGVISSQGSSLLSVDLSG-SDVTDFGLTYLKDCESLISLNLNYCD 166
Query: 127 KVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+++D G++ + +S L L + ++A G++ S L NL LDL P L L+
Sbjct: 167 QISDRGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLR 226
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 244
LTKLE L+L W + +++ M P L ++SL+ L +S+
Sbjct: 227 GLTKLESLNLKWCNCITD-----YDMKP--------------LSELASLKSLEISS---- 263
Query: 245 SILEGNENKAPLAKISLAGTTFIN--EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
+K++ G +F+ ++ A L +E L V+ + L L ++ A
Sbjct: 264 ------------SKVTDFGISFLKGLQKLALLNLEGCL-----VTAACLDS---LAELPA 303
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
L +L+L+ + D+ + ++ + NL+ LNL + A + L G L LE L+L +
Sbjct: 304 LSNLNLNRCNLSDNGCKKISRL-ENLKVLNLGFNVITDACLVHLKG-LTKLESLNLDSCK 361
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
I D + ++ + L +++S+T +VG+ L L L+ L+++NL T
Sbjct: 362 IGDEGLVNLAGLEQLNCLELSDT-------EVGSN-----GLHHLSGLSSLQKINLSFTM 409
Query: 423 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 482
+SD++L LS L L+L +TD L L+SL+ LT+L + A +T+ G K
Sbjct: 410 ISDSSLRKLSGLSSLKSLNLDAYQITDAGLANLTSLTGLTDLDLFGARITDFGTNYLKKF 469
Query: 483 RSLKLLDLHGGWL 495
++L+ L++ GG L
Sbjct: 470 KNLRSLEICGGVL 482
>gi|116310796|emb|CAH67587.1| OSIGBa0112M24.4 [Oryza sativa Indica Group]
gi|218195159|gb|EEC77586.1| hypothetical protein OsI_16540 [Oryza sativa Indica Group]
Length = 581
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 202/439 (46%), Gaps = 78/439 (17%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+ + + L + SL+ C VT+ A M L LDL RC K+ G+ H
Sbjct: 170 DQISEHGLKTLSGLSNVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKI-HGGLVH 228
Query: 136 LLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + LEKL L G+T + LS L NL L L ++DL + L+ L+KL +L+
Sbjct: 229 LKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLN 288
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA 254
L G V+ AA L++ + ++SL LNLS C + EG E+
Sbjct: 289 LEGCAVT---AACLEV----------------ISGLASLVLLNLSRCGVYD--EGCEHLE 327
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
L K+ + F YI + L L ++ LE L+L S IG
Sbjct: 328 GLVKLKVLNL-------GFNYITDACLVHL-------------KELINLECLNLDSCKIG 367
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
D+ + + + LR+L LS+T S G+ L+G L NL+ ++LS T + D + +S +
Sbjct: 368 DEGLAHLKGL-LKLRSLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGL 425
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLNHLERL----------------N 417
SL+ +++ N I TD L+ LT L L HL+ N
Sbjct: 426 NSLRSLNLDNRQI----------TDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKN 475
Query: 418 LEQTQV-----SDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVL 471
L+ +V +DA + + K L L+L +N +LTD SL +S L+ L +L++ ++ +
Sbjct: 476 LQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKSLELISGLTALVSLNVSNSRV 535
Query: 472 TNSGLGSFKPPRSLKLLDL 490
+NSGL KP ++L+ L L
Sbjct: 536 SNSGLHHLKPLQNLRSLSL 554
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 195/418 (46%), Gaps = 39/418 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + ++V AE L SL++ C ++ L L G+ L++L+L C
Sbjct: 185 NVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYC 243
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G VT L +
Sbjct: 244 NGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVIS 303
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L V + G L+ +L LNL + +T L + +LECLNL +
Sbjct: 304 GLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDS 363
Query: 241 CTIDSILEGNENKAPLAKI----------SLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
C I G+E A L + + G+ + +++ LSF V++
Sbjct: 364 CKI-----GDEGLAHLKGLLKLRSLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIG 418
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 350
L + ++ + +L L+L + I D+ + + C+ L +L+L R + AG L +
Sbjct: 419 LKK---ISGLNSLRSLNLDNRQITDNGLAALTCL-TGLTHLDLFGARITDAGTNCLK-YF 473
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
NL+ L + G I D + + + +L +++S Q G TD L L + L
Sbjct: 474 KNLQSLEVCGGLITDAGVKNIKDLKALTLLNLS---------QNGNLTDKSLEL--ISGL 522
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL-SIR 467
L LN+ ++VS++ L L + L LSL + +T + + +L L+ L NL S+R
Sbjct: 523 TALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCKVTAIEIKKL-QLAALPNLVSVR 579
>gi|406835528|ref|ZP_11095122.1| hypothetical protein SpalD1_27934 [Schlesneria paludicola DSM
18645]
Length = 590
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 203/478 (42%), Gaps = 78/478 (16%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCR-----------------------R 102
N E + L+ + DA + L +F L LN++D R
Sbjct: 124 NLETVWLQNTSITDA-GIKELASFERLAELNLSDTRITDRGLRELSDFQNLTTLWLQNVE 182
Query: 103 VTSSALWALTGMTCLKELDLSR-----CVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
+T L AL + + LDLS +++TD G++ L + L L+L+ + G+
Sbjct: 183 MTDDGLQALKRLKTITTLDLSNLNGLNTIRITDEGLEQLSDLPELRHLYLANIPIADSGL 242
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
L L++L+VLDL G +TD L L+ L +LE L +Q+S+ G LK L+ L
Sbjct: 243 TSLRRLKHLTVLDLRGTQITDEGLNELRGLHELETFKLTKTQISDAGLTALKGLKNLTTL 302
Query: 218 -----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE------------NKAPLAKIS 260
+ TG+ +L N+ L+ L+LS+ + + E N + P+ +
Sbjct: 303 LIGSNQITGTGLQELTNLDQLKTLDLSDTQVTDV-ELNRLSSIRTLTDLRLSDTPITDVG 361
Query: 261 -------------LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEH 305
G T I + ++ L+ LD+ + ++ L +K L
Sbjct: 362 LRSLRELKRLRRLTLGGTQITDISELNHLRD--LTHLDLRVTPITDTGLHGLGDLKHLTS 419
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L+L ++ + D S+ + C+ +L+ L+LS T S G L L L +L I D
Sbjct: 420 LNLDATQVTDASLSELKCL-VHLKELSLSRTAISGLGFKSLE-RLEQLTVLRCDRCLIAD 477
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
+ + + SLK + IS T + L L L L+ L +E ++D
Sbjct: 478 EGLREICTLKSLKTLVISGTRVTDD------------GLAELHQLEGLQELRIENNALTD 525
Query: 426 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 483
A + L +L L + + +TD SL + L LT L IR+ +T+SGL FK R
Sbjct: 526 AGMSELMVLGKLRTLGISHNKITDTSLSDIKRLKNLTMLRIRNTEITDSGLNGFKDAR 583
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 52/395 (13%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L L +T L L+LS ++TD G+ HL ++ LE +WL T +T GI L+S + L+
Sbjct: 92 LKELADLTSLVNLNLSDT-RITDRGLFHLKRLTNLETVWLQNTSITDAGIKELASFERLA 150
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
L+L +TD LR L L L L ++++ G LK ++ L+L+
Sbjct: 151 ELNLSDTRITDRGLRELSDFQNLTTLWLQNVEMTDDGLQALKRLKTITTLDLS------- 203
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
N++ L + +++ EG E + L ++ LY L+ + ++
Sbjct: 204 -NLNGLNTIRITD-------EGLEQLSDLPELR------------HLY-----LANIPIA 238
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
+S L+ L ++K L LDL + I D+ + + + L L+ T+ S AG+ L
Sbjct: 239 DSGLTS---LRRLKHLTVLDLRGTQITDEGLNELRGL-HELETFKLTKTQISDAGLTALK 294
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----IQQVGAETDLVLS 403
G L NL L + QI + ++ + LK +D+S+T + + + TDL LS
Sbjct: 295 G-LKNLTTLLIGSNQITGTGLQELTNLDQLKTLDLSDTQVTDVELNRLSSIRTLTDLRLS 353
Query: 404 LTALQNLNHLERLNLEQ--------TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
T + ++ L++ TQ++D + L+ ++L HL LR +TD LH L
Sbjct: 354 DTPITDVGLRSLRELKRLRRLTLGGTQITDIS--ELNHLRDLTHLDLRVTPITDTGLHGL 411
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L LT+L++ +T++ L K LK L L
Sbjct: 412 GDLKHLTSLNLDATQVTDASLSELKCLVHLKELSL 446
>gi|357458869|ref|XP_003599715.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355488763|gb|AES69966.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 585
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 218/476 (45%), Gaps = 42/476 (8%)
Query: 37 LPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENS-VDAEWMAYL---GAFRYL 92
LP ++ +L +L+ R + LE F+ A GE + VD WM + G+
Sbjct: 76 LPRDISQQILNNLVYSRRLTGDSLEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLLS 135
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETG 151
L+ +D VT L L L L+L+ C +++D G++ + +S L L +
Sbjct: 136 VDLSASD---VTDFGLTYLQDCRSLISLNLNYCDQISDHGLECISGLSNLTSLSFRRNDS 192
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKM 210
++A G++ S L NL LDL P LQ LTKLE L++ W + +++ L
Sbjct: 193 ISAQGMSAFSRLVNLVKLDLERCPGIHGGTVHLQGLTKLESLNMKWCNCITDSDIKPLSE 252
Query: 211 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
L+ L ++ + G++ L + L LNL C + S A L +S
Sbjct: 253 LASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTS--------ACLDSLSGCHEH 304
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
I + A + L+ ++S+ RF L ++K L +L + IGD + + +
Sbjct: 305 TIPKLPALSNLN---LNRCNISDRGCERFSRLEKLKVL---NLGFNDIGDRCLAHMKGL- 357
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
L +LNL + + G+ LAGH L L LS T++ ++ + ++S + SL+ I++S T
Sbjct: 358 TKLESLNLDSCKIGDEGLENLAGH-KQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFT 416
Query: 386 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
+ G L L L+ L+ LNL+ Q++DA L L++ L L L A
Sbjct: 417 ----VVSDSG--------LRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGA 464
Query: 446 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
+TDV + L L +L I LT++G+ + K SL L+L LT+ +
Sbjct: 465 RITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 520
>gi|357164542|ref|XP_003580088.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Brachypodium distachyon]
Length = 580
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 226/512 (44%), Gaps = 95/512 (18%)
Query: 37 LPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-EAIELRGENSVDAEWMAYLGA-FRYLRS 94
LP L+ + L+ + LE F+ A + I L V WM + + + L S
Sbjct: 79 LPRDLSQQIFNELVEWSYLTEESLEAFRDCALQDICLEEYPGVKDAWMEVVASQGQSLLS 138
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLT 153
++++ C VT S L L + ++ L + C ++++ G+K L +S L L L + +T
Sbjct: 139 VDIS-CSDVTDSGLDVLKDCSNMQSLACNYCDQISEHGLKTLSGLSNLTSLSLKKCAAVT 197
Query: 154 ADGIALLSSLQNLSVLDL-------GGL------------------PVTDLVLRSLQVLT 188
A+G + L NL LDL GGL +TD ++ L LT
Sbjct: 198 AEGAKAFADLVNLVNLDLERCPKIHGGLVHLKGLRKLETLNMRYCNCITDSDMKYLSDLT 257
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI 243
L L L ++S+ G + LK +L+ LNL VT + ++SL LNL+ C I
Sbjct: 258 NLRELQLSCCKISDIGVSYLKGLSKLAHLNLEGCAVTAACLEAISGLASLILLNLNRCGI 317
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
EG EN L K+ + F + +A L L ++ +L
Sbjct: 318 YD--EGCENLEGLVKLKVLNLGFNHITDACLV--------------------HLKELVSL 355
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
E L+L S IGD+ + + LR+L LS+T S G+ L+G L NL+ ++LS T +
Sbjct: 356 ECLNLDSCKIGDEGLLHLK-GLLQLRSLELSDTEVGSNGLRHLSG-LRNLQSMNLSFTLV 413
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
D + ++ + SLK +++ N I TD L AL L L L+L ++
Sbjct: 414 TDIGLKKVAGLNSLKSLNLDNRQI----------TDN--GLAALAGLTGLTHLDLFGARI 461
Query: 424 SDATLFPLSTFKELIHLSL-------------------------RNASLTDVSLHQLSSL 458
+D+ L FKEL L L +N +LTD +L +S L
Sbjct: 462 TDSGTNCLRYFKELQSLELCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDRTLELISGL 521
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+ L +L++ + ++N+GL K ++L+ L L
Sbjct: 522 TALVSLNLSNTRVSNAGLHHLKLLQNLRSLSL 553
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 194/416 (46%), Gaps = 45/416 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ L+ +V AE L +L++ C ++ L L G+ L+ L++ C
Sbjct: 184 NLTSLSLKKCAAVTAEGAKAFADLVNLVNLDLERCPKI-HGGLVHLKGLRKLETLNMRYC 242
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ MK+L ++ L +L LS ++ G++ L L L+ L+L G VT L ++
Sbjct: 243 NCITDSDMKYLSDLTNLRELQLSCCKISDIGVSYLKGLSKLAHLNLEGCAVTAACLEAIS 302
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L + + G L+ +L LNL + +T L + SLECLNL +
Sbjct: 303 GLASLILLNLNRCGIYDEGCENLEGLVKLKVLNLGFNHITDACLVHLKELVSLECLNLDS 362
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I G+E G + +E LS +V ++ L L+ +
Sbjct: 363 CKI-----GDE-----------GLLHLKGLLQLRSLE---LSDTEVGSNGLRH---LSGL 400
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
+ L+ ++LS +++ D ++ VA G N L++LNL N + + G+ LAG L L L L
Sbjct: 401 RNLQSMNLSFTLVTDIGLKKVA--GLNSLKSLNLDNRQITDNGLAALAG-LTGLTHLDLF 457
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
G +I D + + L+ +++ G I G + +++L L LNL
Sbjct: 458 GARITDSGTNCLRYFKELQSLELCG----GLITDAGVKN--------IKDLKALTLLNLS 505
Query: 420 QT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
Q ++D TL +S L+ L+L N +++ LH L L L +LS+ +T S
Sbjct: 506 QNGNLTDRTLELISGLTALVSLNLSNTRVSNAGLHHLKLLQNLRSLSLDSCKVTAS 561
>gi|46446522|ref|YP_007887.1| hypothetical protein pc0888 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400163|emb|CAF23612.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 653
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 214/433 (49%), Gaps = 53/433 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L + + +A+L L+ L ++DCR++T + L LT +T L+ L+LS C
Sbjct: 249 NLKVLHLEKCQVITDDGLAHLTPLTALQHLELSDCRKLTDAGLAHLTPLTALQHLNLSFC 308
Query: 126 VKVTDAGMKHLLSISTLEKLWLSET--GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLR 182
K+TDAG+ HL ++ L+ L LS LT G+A L+ L L L+L +TD L
Sbjct: 309 DKLTDAGLAHLTPLTALQHLNLSRCYYKLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLV 368
Query: 183 SLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSL 233
L++LT L++LDL W +++ G A L L L+L+ G+ L +++L
Sbjct: 369 HLKLLTGLQHLDLREFW--ELTGAGLAHLTTLTALQHLDLSGCDKLTDVGLAHLTPLTTL 426
Query: 234 ECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
+ L+L C N A L + L G +N E + ++++ L+
Sbjct: 427 QHLDLKRCR-------NLTNAGLVHLKLLTGLQHLNLSECY-----------HLTDAGLA 468
Query: 293 RFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHL 350
LT + AL+HLDLS S + DD + + + A L++L+LS ++ + G+ L L
Sbjct: 469 H---LTPLTALQHLDLSQCSKLTDDGLAHLTPLTA-LQHLDLSQCSKLTDDGLAHLTP-L 523
Query: 351 PNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L+ L L+ + + D +++++ + +L+ +++S G + GA + L ALQ+
Sbjct: 524 TALQHLVLARCRNLTDAGLAHLTPLETLQHLNLS-----GGYKLTGAGLAHLRPLVALQH 578
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD 468
L+ L N ++DA L L+ L HL L LTD L L L L +L +
Sbjct: 579 LD-LSYCN----GLTDAGLAHLTPLVALQHLDLSYCDGLTDAGLTHLRPLVALQHLDLSY 633
Query: 469 A-VLTNSGLGSFK 480
LT++GL FK
Sbjct: 634 CDGLTDAGLAHFK 646
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 183/416 (43%), Gaps = 87/416 (20%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET- 150
+ + N +D +T + L AL LK L L +C +TD G+ HL ++ L+ L LS+
Sbjct: 225 IEAFNFSDNAYLTDAHLLALKDCKNLKVLHLEKCQVITDDGLAHLTPLTALQHLELSDCR 284
Query: 151 GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
LT G+A L+ L L L+L +TD L L LT L++L+L
Sbjct: 285 KLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLAHLTPLTALQHLNL-------------- 330
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
+ L G+ L +++L+ LNLS C K++ AG +
Sbjct: 331 ---SRCYYKLTDAGLAHLTPLTALQHLNLSFCD---------------KLTDAGLVHLKL 372
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG---- 325
+++ L F +++ + L+ LT + AL+HLDLS G D + V
Sbjct: 373 LTGLQHLD--LREFWELTGAGLAH---LTTLTALQHLDLS----GCDKLTDVGLAHLTPL 423
Query: 326 ANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDIS 383
L++L+L R ++AG+ L L L+ L+LS + D +++++ + +L+ +D+S
Sbjct: 424 TTLQHLDLKRCRNLTNAGLVHLKL-LTGLQHLNLSECYHLTDAGLAHLTPLTALQHLDLS 482
Query: 384 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
++++D L L+ L HL L
Sbjct: 483 QC-----------------------------------SKLTDDGLAHLTPLTALQHLDLS 507
Query: 444 NAS-LTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 497
S LTD L L+ L+ L +L + R LT++GL P +L+ L+L GG+ LT
Sbjct: 508 QCSKLTDDGLAHLTPLTALQHLVLARCRNLTDAGLAHLTPLETLQHLNLSGGYKLT 563
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 297 LTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRF--SSAGVGILAGHLPNL 353
LT + AL+HL+LS + D + + + A L++LNLS + + AG+ L L L
Sbjct: 294 LTPLTALQHLNLSFCDKLTDAGLAHLTPLTA-LQHLNLSRCYYKLTDAGLAHLTP-LTAL 351
Query: 354 EILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
+ L+LS ++ D + ++ ++ L+ +D+ + F + GA + +LTALQ H
Sbjct: 352 QHLNLSFCDKLTDAGLVHLKLLTGLQHLDL-----REFWELTGAGLAHLTTLTALQ---H 403
Query: 413 LERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV 470
L+ ++ T V A L PL+T + HL L+ +LT+ L L L+ L +L++ +
Sbjct: 404 LDLSGCDKLTDVGLAHLTPLTTLQ---HLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECY 460
Query: 471 -LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
LT++GL P +L+ LDL LT+D +
Sbjct: 461 HLTDAGLAHLTPLTALQHLDLSQCSKLTDDGL 492
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 50/291 (17%)
Query: 223 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
G+ L +++L+ L LS+C K++ AG + A ++ LS
Sbjct: 265 GLAHLTPLTALQHLELSDC---------------RKLTDAGLAHLTPLTALQHLN---LS 306
Query: 283 FLD-VSNSSLSRFCFLTQMKALEHLDLSSSM--IGDDSVEMVACVGANLRNLNLS-NTRF 338
F D ++++ L+ LT + AL+HL+LS + D + + + A L++LNLS +
Sbjct: 307 FCDKLTDAGLAH---LTPLTALQHLNLSRCYYKLTDAGLAHLTPLTA-LQHLNLSFCDKL 362
Query: 339 SSAGV---GILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 393
+ AG+ +L G HL E L+G +++++ + +L+ +D+S D +
Sbjct: 363 TDAGLVHLKLLTGLQHLDLREFWELTGA-----GLAHLTTLTALQHLDLSGCDK---LTD 414
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVS 451
VG L L L L+ L+L++ + +++A L L L HL+L LTD
Sbjct: 415 VG--------LAHLTPLTTLQHLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECYHLTDAG 466
Query: 452 LHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
L L+ L+ L +L + + LT+ GL P +L+ LDL LT+D +
Sbjct: 467 LAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLDLSQCSKLTDDGL 517
>gi|326497793|dbj|BAJ98524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 583
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 141/534 (26%), Positives = 241/534 (45%), Gaps = 80/534 (14%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
+R L+ LC+ C+ + K+ +L LP+ ++ + L+ + LE F
Sbjct: 56 DRCPTLMNLCVAKVCKD---ISKYS----TLAMLPSDISQQIFDELVGSNRLTEESLETF 108
Query: 64 KHNA-EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKELD 121
+ A I L V WM + + R L S++++ C VT L L+ + ++ L
Sbjct: 109 RDCALHDICLGEYPGVTDAWMEVVASQRQSLLSVDIS-CSEVTDGGLNFLSDCSSMQSLS 167
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL-------GG 173
+ C +V++ G+ L S L L + G+TA+G+++ + L NL LDL GG
Sbjct: 168 CNYCDRVSEHGIGVLSGFSNLTSLSFKRSDGVTAEGMSVFADLVNLVNLDLECCLKIHGG 227
Query: 174 LP------------------VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
L +TD ++ L LT L+ L L ++++ G + L +L+
Sbjct: 228 LVHMKGLRKLESLNMRYCNYITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLTGLSKLT 287
Query: 216 FLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 270
LNL VT + ++SL LNL+ C I EG E+ L K+ + F +
Sbjct: 288 HLNLESCPVTAACLEAISGLASLMLLNLNRCGIYD--EGCESFEDLKKLKVLNLGFNHIT 345
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
+A L L + LE L+L S IGD+ + + L++
Sbjct: 346 DACLV--------------------HLKGLINLESLNLDSCKIGDEGLLHLK-GLVLLKS 384
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDI 387
L LS+T S G+ L+G L NL ++LS T + D + +S + SLK +++ N TD+
Sbjct: 385 LELSDTAIGSNGLQHLSG-LRNLHSINLSFTLVTDTGMKKISTLNSLKSVNLDNRLITDV 443
Query: 388 KGFIQQVGAETDLVLSLTALQNLNH----------LERLNLEQTQVSDATLFPLSTFKEL 437
G +G L L + +H LE L + ++DA + + K L
Sbjct: 444 -GLAALIGLTGLTHLDLFGARVTDHGTSFLRYFKNLESLEVCGGSITDAGVKNIKDLKAL 502
Query: 438 IHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L+L +NA LTD +L +S L+ L +L++ ++ ++N+G K ++L+ L L
Sbjct: 503 TLLNLSQNAKLTDKTLELISGLTALVSLNVSNSRVSNAGFRHLKALQNLRSLTL 556
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 196/415 (47%), Gaps = 47/415 (11%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + + V AE M+ L +L++ C ++ L + G+ L+ L++ C
Sbjct: 187 NLTSLSFKRSDGVTAEGMSVFADLVNLVNLDLECCLKI-HGGLVHMKGLRKLESLNMRYC 245
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K+L ++ L++L LS +T G++ L+ L L+ L+L PVT L ++
Sbjct: 246 NYITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLTGLSKLTHLNLESCPVTAACLEAIS 305
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L + + G + +L LNL + +T L + +LE LNL +
Sbjct: 306 GLASLMLLNLNRCGIYDEGCESFEDLKKLKVLNLGFNHITDACLVHLKGLINLESLNLDS 365
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLT 298
C I G+E L + L + L++S++++ L+
Sbjct: 366 CKI-----GDEGLLHLKGLVLLKS-------------------LELSDTAIGSNGLQHLS 401
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
++ L ++LS +++ D ++ ++ + + L+++NL N + G+ L G L L L L
Sbjct: 402 GLRNLHSINLSFTLVTDTGMKKISTLNS-LKSVNLDNRLITDVGLAALIG-LTGLTHLDL 459
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 418
G ++ D+ S++ +L+ +++ G I G + +++L L LNL
Sbjct: 460 FGARVTDHGTSFLRYFKNLESLEVCG----GSITDAGVKN--------IKDLKALTLLNL 507
Query: 419 EQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
Q +++D TL +S L+ L++ N+ +++ L +L L +L++ +T
Sbjct: 508 SQNAKLTDKTLELISGLTALVSLNVSNSRVSNAGFRHLKALQNLRSLTLDSCRVT 562
>gi|108763744|ref|YP_632240.1| leucine-rich repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108467624|gb|ABF92809.1| leucine-rich repeat domain protein [Myxococcus xanthus DK 1622]
Length = 624
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 170/373 (45%), Gaps = 42/373 (11%)
Query: 126 VKVTDAGMKHLLSI---STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
V TD G HL S+ + LE L L+ T +T G+A L ++ L+VL L PV+D L
Sbjct: 145 VSGTDFGNAHLASLENATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAGLA 204
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
SL T L + L G+ VS +G L P LE L+LS+
Sbjct: 205 SLSEHTTLRRVTLAGTAVSPQGLGFLARQP-------------------GLEELDLSDTA 245
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMK 301
+D + APL ++L+GT N L SL L + +S + +T ++
Sbjct: 246 VDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLHITGLR 305
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
LE L L S+ + D + +A + A LR L LS R AG+ LAG L LE L L T
Sbjct: 306 ELEALHLGSTQVTDAGLLHLAKLPA-LRALVLSKARIRGAGLRHLAG-LSRLEALHLDDT 363
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ-----VGAE----TDLVL---SLTALQN 409
+ D A+ ++ + L+ +D+S T I G Q V E + L L SLTAL
Sbjct: 364 LVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTLVALESLWLSGLALTDDSLTALAP 423
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD---VSLHQLSSLSKLTNLSI 466
L+ L RL L T + L L + L HL L TD S+ Q + L +L
Sbjct: 424 LSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQ--AFPGLHSLKA 481
Query: 467 RDAVLTNSGLGSF 479
+LT++GLG F
Sbjct: 482 ERTLLTDAGLGQF 494
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 157/350 (44%), Gaps = 32/350 (9%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L A LR L +A + ++L +TG+ L+ L L +VTDAG+ HL + L L
Sbjct: 277 LSAMPSLRRLGLARTA-ASDASLLHITGLRELEALHLG-STQVTDAGLLHLAKLPALRAL 334
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
LS+ + G+ L+ L L L L V D LR L+ L +L LDL + ++ G
Sbjct: 335 VLSKARIRGAGLRHLAGLSRLEALHLDDTLVGDSALRHLRGLNELRELDLSRTAITGTGL 394
Query: 206 AVLKMFPR-----LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK-I 259
L LS L L +T L +S L L LS+ I + PL + +
Sbjct: 395 QELSTLVALESLWLSGLALTDDSLTALAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHL 454
Query: 260 SLAGTTFINE-----REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
L+ T F +E R+AF + + ++++ L +F T+++A+ ++ ++I
Sbjct: 455 DLSKTGFTDEWVPSIRQAFPGLHSLKAERTLLTDAGLGQFAEWTELEAIH---VAGTLIN 511
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
+ + + A L L+L TR S G L G L LS++G + D + ++
Sbjct: 512 GSGLTRLHTL-ARLTTLDLGATRLDSEGQKALQG-FTKLVWLSVAGVRTGDEMLGHLPR- 568
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
SL+ + ++ T + TD L AL L HL L+L T VS
Sbjct: 569 -SLRTLYLTRTKV----------TD--AGLPALHKLPHLRELDLRGTAVS 605
>gi|356550632|ref|XP_003543689.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 565
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 192/416 (46%), Gaps = 41/416 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R ++ A+ + L L++ C + S L + G+T L+ L+L+ C
Sbjct: 169 NLASLSFRRNYAISAQGLNTFSGLINLVKLDLERCPGIHGS-LVHIQGLTMLESLNLNWC 227
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ D MK L ++ L+ L +S +T GI+ L LQ L++L+L G VT L SL+
Sbjct: 228 NCLVDVDMKPLSVLTNLKSLEISFNKVTDFGISFLKGLQKLNLLNLEGCQVTTACLDSLE 287
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSN 240
L L L+L +SN G L LNL + +T L ++ L+ LNL +
Sbjct: 288 ELPALSNLNLSRCNLSNDGCEKFSRLENLKVLNLGFNDITDACLAHLKGLTKLKSLNLDS 347
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I+ EG + LAG +N E LS + ++ L L+ +
Sbjct: 348 CRIED--EG--------LVHLAGHQQLNCLE---------LSDTGIGSNGLHH---LSGL 385
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
LE ++LS + + D + + C ++L++LNL + + G+ L L L L L G
Sbjct: 386 SNLEKINLSFTFVNDSGLSKL-CGLSSLKSLNLDARQVTDTGLASLTS-LTGLTELDLFG 443
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I D+ +Y+ +L+ ++I ++ + E + SL QN N
Sbjct: 444 ARITDFGTNYLKCFKNLRLLEICGGELTDDGVKNIKELSSLKSLNLSQNCN--------- 494
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
++D TL +S +LI L++ N+ +T+ L L +L L +LS+ +T +G+
Sbjct: 495 --LTDTTLELISGLTDLISLNVSNSGITNAGLQHLKTLKNLRSLSLESCKVTANGI 548
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 241/535 (45%), Gaps = 77/535 (14%)
Query: 9 LVRLCIEAACQS--GESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHN 66
L+ LCI + E + K+ + LP L+ + +++ + P+ L+ F+ +
Sbjct: 28 LLDLCIRKITHTLTREDIHKYN----TFSALPPDLSQRIFNNMVYSSYLTPASLQPFRDS 83
Query: 67 AEAIELRGENS-----------VDAEWMAYL---GAFRYLRSLNVADCRRVTSSALWALT 112
A GE VD WM + G+ L+ +D VT L L
Sbjct: 84 ALQDICLGEYEYANGGGAAAAIVDDAWMDVISSQGSSLLHLDLSASD---VTDHGLTFLG 140
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDL 171
T + L+L+ C +++D G++ + +S L L + ++A G+ S L NL LDL
Sbjct: 141 HCTNIISLNLNHCHQISDHGLECISGLSNLASLSFRRNYAISAQGLNTFSGLINLVKLDL 200
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVT 225
P L +Q LT LE L+L W + + + L + L L +++ G++
Sbjct: 201 ERCPGIHGSLVHIQGLTMLESLNLNWCNCLVDVDMKPLSVLTNLKSLEISFNKVTDFGIS 260
Query: 226 KLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINER-EAFLYIETSL--- 280
L + L LNL C + + L+ E L+ ++L+ N+ E F +E
Sbjct: 261 FLKGLQKLNLLNLEGCQVTTACLDSLEELPALSNLNLSRCNLSNDGCEKFSRLENLKVLN 320
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L F D++++ L+ LT++K+L +L S I D+ + +A L L LS+T S
Sbjct: 321 LGFNDITDACLAHLKGLTKLKSL---NLDSCRIEDEGLVHLA-GHQQLNCLELSDTGIGS 376
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G+ L+G L NLE ++LS T ++D +S + + SLK +++ +QV TD
Sbjct: 377 NGLHHLSG-LSNLEKINLSFTFVNDSGLSKLCGLSSLKSLNLD-------ARQV---TDT 425
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL------------------ 442
L +L +L L L+L +++D L FK L L +
Sbjct: 426 --GLASLTSLTGLTELDLFGARITDFGTNYLKCFKNLRLLEICGGELTDDGVKNIKELSS 483
Query: 443 -------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+N +LTD +L +S L+ L +L++ ++ +TN+GL K ++L+ L L
Sbjct: 484 LKSLNLSQNCNLTDTTLELISGLTDLISLNVSNSGITNAGLQHLKTLKNLRSLSL 538
>gi|255583092|ref|XP_002532313.1| protein binding protein, putative [Ricinus communis]
gi|223527982|gb|EEF30065.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 192/415 (46%), Gaps = 44/415 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + N+V AE M + L L++ C ++ L L G+ L+ L++ C
Sbjct: 181 NLTSLSFKRCNAVTAEGMRGFSSLVNLEKLDLERCPQI-HGGLAHLKGLLKLESLNIRCC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ D MK L I+ L++L +S + +T G++ L LQ L +L+L G VT L S+
Sbjct: 240 KCIEDMDMKALSDITNLKELQISNSNVTDLGVSYLKGLQKLIMLNLEGCNVTTACLDSIS 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L YL+L +S+ G + L L+L + +T L + +LE LNL +
Sbjct: 300 ALVALTYLNLNRCNLSDDGCSKFSGLKNLKVLSLGFNNITDACLVHLKGLMNLENLNLDS 359
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I N PL + L+ T +V ++ L LT
Sbjct: 360 CNIGDEGLANLTGLPLKSLELSDT--------------------EVGSNGLRHLSGLT-- 397
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
LE+L+LS +++ D + ++ +LR+LNL + + AG+ L L L L L G
Sbjct: 398 -LLENLNLSFTLVTDSGLRRLS-GLLSLRSLNLDARQITDAGLAALT-RLTGLIHLDLFG 454
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I D Y+ +L+ ++I G + G + +++L HL LNL Q
Sbjct: 455 ARISDSGTKYLQYFKNLQSLEICG----GGLTDDGVKN--------IKDLVHLTVLNLSQ 502
Query: 421 -TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
+ ++D TL +S EL+ L++ N+ +T+ LH L L L +LS+ +T S
Sbjct: 503 NSNLTDKTLELISGLTELVSLNVSNSLITNEGLHYLKPLKNLRSLSLESCKVTAS 557
>gi|46446659|ref|YP_008024.1| hypothetical protein pc1025 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400300|emb|CAF23749.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 695
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 197/424 (46%), Gaps = 66/424 (15%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L N + +A+L L+ L+++ C +T L L +T L+ LDL C K
Sbjct: 303 QKLNLGRYNQLTDAGLAHLKPLTALQRLDLSFCEDLTDDGLAHLRPLTALQRLDLRYCEK 362
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQV 186
+TD G+ HL ++ L++L LS T G++ LS L L L+L + +TD L L++
Sbjct: 363 LTDDGLVHLRPLTALQRLNLSNCWHTGAGLSHLSPLTGLQHLNLYECINLTDAGLVHLKL 422
Query: 187 LTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLS 239
LT L++L+L + ++++ G LK+ L LNL+ G+ L ++ L+ LNLS
Sbjct: 423 LTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLVHLKFLTGLQHLNLS 482
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 299
C +++ AG + ++ S + +N + + LT
Sbjct: 483 YCD---------------ELTDAGLVHLKLLTGLQHLNLS-----NCNNLTDAGLAHLTP 522
Query: 300 MKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
+ L+HLDLS S + DD + + + A L+ LNLSN R
Sbjct: 523 LTGLQHLDLSYCSKLTDDGLAHLKPLTA-LQCLNLSNCR--------------------- 560
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 418
+ D + ++ ++ L+ +++S D K D ++ L L L HLE L
Sbjct: 561 ---NLTDAGLVHLKLLTGLQHLNLS--DYKNLTD------DGLIHLMPLMALRHLELLGC 609
Query: 419 EQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 476
E ++DA L L+ L HL+L + LTD L L+SL+ L +L + LT++GL
Sbjct: 610 E--NLTDAGLVHLTPLTALQHLNLSHCDDLTDAGLAHLTSLTGLQHLELLGCENLTDAGL 667
Query: 477 GSFK 480
FK
Sbjct: 668 ARFK 671
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 186/437 (42%), Gaps = 92/437 (21%)
Query: 80 AEWMAYLGAF-RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
AE+ + F + + LN ++ R +T + L L LK L L +C +TD G+ HL
Sbjct: 214 AEFERIINHFSKKIEGLNFSNNRYLTDAHLLILKNCKNLKVLHLEKCRALTDDGLAHLTP 273
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW-G 197
++ L+ L LS +TD L L LT L+ L+L
Sbjct: 274 LTALQYLNLS-----------------------ASYNLTDAGLVHLAPLTALQKLNLGRY 310
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNE 251
+Q+++ G A LK L L+L++ G+ L +++L+ L+L C
Sbjct: 311 NQLTDAGLAHLKPLTALQRLDLSFCEDLTDDGLAHLRPLTALQRLDLRYC---------- 360
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
K++ G + A L L++SN C+ T L HL S
Sbjct: 361 -----EKLTDDGLVHLRPLTA--------LQRLNLSN------CWHTG-AGLSHL---SP 397
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISY 370
+ G + + C+ NL + L + + L L+ L+LS ++ D + +
Sbjct: 398 LTGLQHLNLYECI--NLTDAGLVHLKL-----------LTGLQHLNLSYCDELTDAGLVH 444
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLF 429
+ ++ L+ +++SN + + G L L+ L L+ LNL +++DA L
Sbjct: 445 LKLLTGLQHLNLSNCN---NLTDAG--------LVHLKFLTGLQHLNLSYCDELTDAGLV 493
Query: 430 PLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKL 487
L L HL+L N + LTD L L+ L+ L +L + + LT+ GL KP +L+
Sbjct: 494 HLKLLTGLQHLNLSNCNNLTDAGLAHLTPLTGLQHLDLSYCSKLTDDGLAHLKPLTALQC 553
Query: 488 LDLHGGWLLTEDAILQF 504
L+L LT+ ++
Sbjct: 554 LNLSNCRNLTDAGLVHL 570
>gi|356548547|ref|XP_003542662.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 578
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 239/522 (45%), Gaps = 64/522 (12%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA- 67
L+ LCI+ + E K+ S LP ++ + L+ + LE F+ A
Sbjct: 56 LMDLCIK---KMREDFHKYN----SFSILPRDISQQIFNELVDSHCLTEVSLEAFRDCAL 108
Query: 68 EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
+ I+L V+ +WM + + L S++VA +VT L L + L+ L LS C
Sbjct: 109 QDIDLGEYVGVNDDWMDVISSQGLSLLSVDVAG-SQVTDDGLRLLKDCSSLQALTLSYCD 167
Query: 127 KVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL-------GGLP--- 175
+ ++ G+KH+ +S L L + ++ + DG+ S+L NL LDL GG
Sbjct: 168 QFSEYGLKHISGLSNLTSLSIRKSSSVKPDGMRAFSNLFNLEKLDLERCSEIHGGFVHLK 227
Query: 176 ---------------VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
VTD ++S+ L L+ L + S +++ G L+ +L+ LN+
Sbjct: 228 GLKKLEYLNIGCCKCVTDSDIKSISELINLKELQISNSSITDIGITYLRGLEKLTTLNVE 287
Query: 221 WTGVTK-----LPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFL 274
+T + ++SL CLNL+ C + D E L ++SLA + L
Sbjct: 288 GCNITAACLEFIHALTSLACLNLNRCGLSDDGFEKISGLKNLKRLSLAFNRITDACLVHL 347
Query: 275 YIETSL----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
T+L L + + L+ LT +K+L LS + IG+ + ++ + L +
Sbjct: 348 KDLTNLEYLNLDSCRIGDGGLANLTGLTLLKSLV---LSDTDIGNSGLRYISGL-KKLED 403
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
LN+S T + G+ L+G L L+ L+L QI D ++ ++ + L +D+
Sbjct: 404 LNVSFTTVTDNGLKRLSG-LTQLKSLNLDARQITDAGLANLTSLSGLITLDL----FGAR 458
Query: 391 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTD 449
I G T L++ +L+ L + ++DA + + L L+L +N +LTD
Sbjct: 459 ISDNGT--------TFLRSFKNLQSLEICGGGLTDAGVKNIREIVSLTQLNLSQNCNLTD 510
Query: 450 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+L +S ++ L +L++ ++ +TN GL KP ++L+ L L
Sbjct: 511 KTLELISGMTALRSLNVSNSRITNEGLRHLKPLKNLRTLTLE 552
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 173/388 (44%), Gaps = 74/388 (19%)
Query: 55 IFPSLLEVFKH--NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT 112
+ P + F + N E ++L + + ++ +L + L LN+ C+ VT S + +++
Sbjct: 194 VKPDGMRAFSNLFNLEKLDLERCSEIHGGFV-HLKGLKKLEYLNIGCCKCVTDSDIKSIS 252
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLL------------------------SISTLEKLWLS 148
+ LKEL +S +TD G+ +L ++++L L L+
Sbjct: 253 ELINLKELQISN-SSITDIGITYLRGLEKLTTLNVEGCNITAACLEFIHALTSLACLNLN 311
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD-------------- 194
GL+ DG +S L+NL L L +TD L L+ LT LEYL+
Sbjct: 312 RCGLSDDGFEKISGLKNLKRLSLAFNRITDACLVHLKDLTNLEYLNLDSCRIGDGGLANL 371
Query: 195 ----------LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLS 239
L + + N G + +L LN+++T VT +L ++ L+ LNL
Sbjct: 372 TGLTLLKSLVLSDTDIGNSGLRYISGLKKLEDLNVSFTTVTDNGLKRLSGLTQLKSLNLD 431
Query: 240 NCTI-DSILEGNENKAPL-------AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
I D+ L + + L A+IS GTTF+ + +E D ++
Sbjct: 432 ARQITDAGLANLTSLSGLITLDLFGARISDNGTTFLRSFKNLQSLEICGGGLTDAGVKNI 491
Query: 292 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 351
LTQ+ ++ +L+ D ++E+++ + A LR+LN+SN+R ++ G+ L L
Sbjct: 492 REIVSLTQLNLSQNCNLT-----DKTLELISGMTA-LRSLNVSNSRITNEGLRHLK-PLK 544
Query: 352 NLEILSLSGTQIDDYAISYM--SMMPSL 377
NL L+L ++ I + + +P+L
Sbjct: 545 NLRTLTLESCKVTASGIKKLQSTDLPNL 572
>gi|46446377|ref|YP_007742.1| hypothetical protein pc0743 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400018|emb|CAF23467.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 765
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 226/477 (47%), Gaps = 69/477 (14%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKE 119
L KH ++L G D + + +L L+ L+++ CR T + L L + L+
Sbjct: 307 LAALKH----LDLSGCELTD-DGLVHLTPLAALQHLDLSHCRNFTDAGLAHLKLLVALQH 361
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA---LLSSLQNLSVLDLGGLP 175
L+LS C K+TDAG+ HL + L+ L LS T G+A LL +LQ+L++ G L
Sbjct: 362 LNLSHCGKLTDAGLAHLKLLVALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSYCGNL- 420
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWT------GVTKLP 228
TD L L L L++LDL G +++ G L L +LNL+W G+ L
Sbjct: 421 -TDAGLAHLTPLMALQHLDLNGCHNLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLT 479
Query: 229 NISSLECLNLSNCTIDSILEGNENKAPLAKI-SLAGTTFINEREAFLYIETSLLSFLDVS 287
+ +L+ LNLS C GN A LA + SLA L LD+
Sbjct: 480 PLMALQHLNLSYC-------GNFTDAGLAHLTSLAA-----------------LKHLDLI 515
Query: 288 NSSLSR--FCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGV 343
L+ L + AL+HL+LS + DD + + + A L++L+LS + + AG+
Sbjct: 516 GCELTDDGLAHLKLLVALQHLNLSYCGKLTDDGLAHLKLLVA-LQHLDLSGCDKLTGAGL 574
Query: 344 GILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
L L L+ L+LS G DD ++ ++ + +L+ +D+S+ G + G
Sbjct: 575 AHLK-FLVALQHLNLSHCGKLTDDGLVN-LTPLAALRHLDLSHC---GKLTGAG------ 623
Query: 402 LSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLS 459
L L+ L L+ LNL +++DA L LS L HL L + +LTD L LS L
Sbjct: 624 --LAHLKFLVALQHLNLSHCGKLTDAGLVNLSPLMALQHLDLSHCGNLTDAGLVNLSPLM 681
Query: 460 KLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
L +L + LT+ GL + K +L+ LDL LT+D + + P I + H
Sbjct: 682 ALQHLDLSHCGNLTDDGLVNLKFLVALQHLDLSHCGNLTDDGL---AHLSPLIALQH 735
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 215/460 (46%), Gaps = 64/460 (13%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ LN + +T + L AL LK L+L C +TDAG+ HL ++ L+ L LS
Sbjct: 260 IEELNFSKNAHLTDAHLLALKNCENLKVLNLQACHNLTDAGLAHLTPLAALKHLDLSGCE 319
Query: 152 LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLK 209
LT DG+ L+ L L LDL TD L L++L L++L+L ++++ G A LK
Sbjct: 320 LTDDGLVHLTPLAALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSHCGKLTDAGLAHLK 379
Query: 210 MFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS--- 260
+ L L+L+ G+ L + +L+ LNLS C GN A LA ++
Sbjct: 380 LLVALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSYC-------GNLTDAGLAHLTPLM 432
Query: 261 ------LAGTTFINEREAFLYIETSL--LSFLDVS---NSSLSRFCFLTQMKALEHLDLS 309
L G N +A L TSL L +L++S N + + LT + AL+HL+LS
Sbjct: 433 ALQHLDLNGCH--NLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLS 490
Query: 310 -SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS--GTQIDDY 366
D + + + A L++L+L + G+ L L L+ L+LS G DD
Sbjct: 491 YCGNFTDAGLAHLTSLAA-LKHLDLIGCELTDDGLAHLKL-LVALQHLNLSYCGKLTDD- 547
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN--------------- 411
++++ ++ +L+ +D+S D + GA + L ALQ+LN
Sbjct: 548 GLAHLKLLVALQHLDLSGCD-----KLTGAGLAHLKFLVALQHLNLSHCGKLTDDGLVNL 602
Query: 412 ----HLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLS 465
L L+L +++ A L L L HL+L + LTD L LS L L +L
Sbjct: 603 TPLAALRHLDLSHCGKLTGAGLAHLKFLVALQHLNLSHCGKLTDAGLVNLSPLMALQHLD 662
Query: 466 IRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
+ LT++GL + P +L+ LDL LT+D ++
Sbjct: 663 LSHCGNLTDAGLVNLSPLMALQHLDLSHCGNLTDDGLVNL 702
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 199/429 (46%), Gaps = 72/429 (16%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ LN++ C +T + L LT + L+ LDL+ C +TDAG+ H
Sbjct: 394 NFTDA-GLAHLKLLVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLNGCHNLTDAGLTH 452
Query: 136 LLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYL 193
L S+ L+ L LS T G+A L+ L L L+L TD L L L L++L
Sbjct: 453 LTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGNFTDAGLAHLTSLAALKHL 512
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSIL 247
DL G ++++ G A LK+ L LNL++ G+ L + +L+ L+LS C
Sbjct: 513 DLIGCELTDDGLAHLKLLVALQHLNLSYCGKLTDDGLAHLKLLVALQHLDLSGCD----- 567
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
K++ AG L+ FL AL+HL+
Sbjct: 568 ----------KLTGAG---------------------------LAHLKFLV---ALQHLN 587
Query: 308 LSS-SMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGT-QID 364
LS + DD + + + A LR+L+LS+ + + AG+ L L L+ L+LS ++
Sbjct: 588 LSHCGKLTDDGLVNLTPLAA-LRHLDLSHCGKLTGAGLAHLK-FLVALQHLNLSHCGKLT 645
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
D + +S + +L+ +D+S+ G + G +++L+ L L HL+ + ++
Sbjct: 646 DAGLVNLSPLMALQHLDLSHC---GNLTDAG-----LVNLSPLMALQHLDLSHC--GNLT 695
Query: 425 DATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNL--SIRDAVLTNSGLGSFKP 481
D L L L HL L + +LTD L LS L L +L S + + SGL
Sbjct: 696 DDGLVNLKFLVALQHLDLSHCGNLTDDGLAHLSPLIALQHLDRSKYNNLTDGSGLAHLTS 755
Query: 482 PRSLKLLDL 490
L+ LDL
Sbjct: 756 LVDLQHLDL 764
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 175/374 (46%), Gaps = 72/374 (19%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G +++ + +L + L+ LN++ T + L LT + L+ L+LS C
Sbjct: 435 QHLDLNGCHNLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGN 494
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIA---LLSSLQNLSVLDLGGLPVTDLVLRSL 184
TDAG+ HL S++ L+ L L LT DG+A LL +LQ+L++ G L TD L L
Sbjct: 495 FTDAGLAHLTSLAALKHLDLIGCELTDDGLAHLKLLVALQHLNLSYCGKL--TDDGLAHL 552
Query: 185 QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLN 237
++L L++LDL G +++ G A LK L LNL+ G+ L +++L L+
Sbjct: 553 KLLVALQHLDLSGCDKLTGAGLAHLKFLVALQHLNLSHCGKLTDDGLVNLTPLAALRHLD 612
Query: 238 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 297
LS+C K++ AG + A ++ S L +++ L L
Sbjct: 613 LSHC---------------GKLTGAGLAHLKFLVALQHLNLSHCGKL--TDAGLVN---L 652
Query: 298 TQMKALEHLDLS-------------SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
+ + AL+HLDLS S ++ +++ C NL + L N +F A
Sbjct: 653 SPLMALQHLDLSHCGNLTDAGLVNLSPLMALQHLDLSHC--GNLTDDGLVNLKFLVA--- 707
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAETDL 400
L +L+ LS G DD ++++S + +L+ +D S TD G
Sbjct: 708 -----LQHLD-LSHCGNLTDD-GLAHLSPLIALQHLDRSKYNNLTDGSGLAH-------- 752
Query: 401 VLSLTALQNLNHLE 414
LT+L +L HL+
Sbjct: 753 ---LTSLVDLQHLD 763
>gi|149176715|ref|ZP_01855326.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844356|gb|EDL58708.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 1266
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 218/463 (47%), Gaps = 32/463 (6%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ +++ + +L L +L + D ++ +AL ++ +T L+ L+L R ++TD GM
Sbjct: 606 KTKINSAGVKHLVPLTELTTLKL-DYTQIDDTALASIAKLTKLRSLNL-RKTEITDTGMV 663
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
HL ++ L+ L L ET ++ G+ L SLQ L L L + D L++L + L+ LD
Sbjct: 664 HLENLKPLKVLSLDETRVSNAGLKSLQSLQQLYRLGLRETDIDDAGLKTLSSIFNLKSLD 723
Query: 195 LWGSQVSNRGAAVLK-MFPRLSFLNLAWTGVTKLPNISSL--ECLNLSNCTIDSILEGNE 251
L+G++V++ G A + + LNL TGVT+ ++ L +C NC I + +
Sbjct: 724 LYGTKVTDTGMAYFHDKLIKPTDLNLHGTGVTE-AGVAMLKQQC---PNCRIQASPPLDS 779
Query: 252 N-KAPLAKISLAGTTFINEREAFLYIETSLLSF--LDVSNSSLS----RFCFLTQMKALE 304
++ LAK+ +G F R E ++ F L LS R L +K L
Sbjct: 780 GIQSILAKLKKSG-GFYTRRRLPENAEQLVVRFYPLPGREKKLSPLDERLSLLNGLKTLY 838
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
LD++ + + D ++ + V LR L L+ F+ G+ L L LE+L + I
Sbjct: 839 ELDVAGADLTDAGLKHLKHV-PELRVLKLNGGNFTEEGLKQLT-QLKKLEVLQIENAGIT 896
Query: 365 DYAISYMSMMPSLK-FIDISNTDIKGFIQQVGAETDL-VLSLTA----------LQNLNH 412
+ + + M LK FI N + ++ + T+L VL+L+ L +L +
Sbjct: 897 NDQLIQLKEMTQLKIFILPQNQITEHGLKHLSGLTNLKVLNLSQNRIYSDGMVHLASLEN 956
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
L L LE T+V+D L L L L L ++TD L ++ L LS+ +T
Sbjct: 957 LRSLALEHTRVADQGLEDLLRLPRLNTLILDGTTITDGGTPLLRKMTSLGMLSLNSTYIT 1016
Query: 473 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
+ GL + R L LDL+ ++ED + F + P+ + +
Sbjct: 1017 DRGLKDLETLRGLYRLDLNDTK-VSEDGVKNFQRSQPKCNIEY 1058
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 167/349 (47%), Gaps = 37/349 (10%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+I G VDA+ + +L L+S++ +T L+G++ L+ L L +
Sbjct: 433 SIRFFGNQIVDAQ-VKHLKHVPRLKSVSFISTS-ITDDCTRHLSGLSELETLQLPGTA-I 489
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
TD G+ L + +LE L LS +G+T G+ L L L+LG VTD L L+ L
Sbjct: 490 TDKGLATLNDLKSLENLDLSRSGITDAGLVSLKKFPQLKTLNLGSTRVTDAGLTHLKALP 549
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCTI 243
KLE L L+ + V+ G + L P+L L+L+ TG+ + + L+ L+L+ I
Sbjct: 550 KLESLKLYNTSVTGTGLSELVTLPKLKTLDLSLTPLTETGLQTVSKLIHLQSLSLTKTKI 609
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+S G ++ PL +++ T L + + +++L+ LT++++
Sbjct: 610 NS--AGVKHLVPLTELT-----------------TLKLDYTQIDDTALASIAKLTKLRS- 649
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
L+L + I D + + + L+ L+L TR S+AG+ L L L L L T I
Sbjct: 650 --LNLRKTEITDTGMVHLENLKP-LKVLSLDETRVSNAGLKSLQS-LQQLYRLGLRETDI 705
Query: 364 DDYAISYMSMMPSLKFID-----ISNTDIKGFIQQVGAETDLVLSLTAL 407
DD + +S + +LK +D +++T + F ++ TDL L T +
Sbjct: 706 DDAGLKTLSSIFNLKSLDLYGTKVTDTGMAYFHDKLIKPTDLNLHGTGV 754
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 195/467 (41%), Gaps = 112/467 (23%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ SV + + L + L SL + +T +AL LTG++ L L+L+R VTDAGM+
Sbjct: 295 QTSVSDQGLQILNELKGLTSLTIMQSP-ITDAALPHLTGLSRLTSLNLARTA-VTDAGME 352
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSS-------------------------------- 162
H++ + L+KL L TG+T+ G+A + +
Sbjct: 353 HIIKLKQLKKLNLISTGVTSAGMARVHAALPKCKIETGKATAPGDSTQAQAAIAALKAQG 412
Query: 163 --LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+QN V G L + + T + + +G+Q+ + LK PRL ++
Sbjct: 413 AHIQNQRVFKNGKL--------TSEYFTSIRF---FGNQIVDAQVKHLKHVPRLKSVSFI 461
Query: 221 WTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 275
T +T L +S LE L L P I+ G +N+
Sbjct: 462 STSITDDCTRHLSGLSELETLQL----------------PGTAITDKGLATLND------ 499
Query: 276 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
+K+LE+LDLS S I D + + L+ LNL +
Sbjct: 500 ------------------------LKSLENLDLSRSGITDAGLVSLKKF-PQLKTLNLGS 534
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQV 394
TR + AG+ L LP LE L L T + +S + +P LK +D+S T + + +Q V
Sbjct: 535 TRVTDAGLTHLKA-LPKLESLKLYNTSVTGTGLSELVTLPKLKTLDLSLTPLTETGLQTV 593
Query: 395 GAETDL-VLSLTA----------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
L LSLT L L L L L+ TQ+ D L ++ +L L+LR
Sbjct: 594 SKLIHLQSLSLTKTKINSAGVKHLVPLTELTTLKLDYTQIDDTALASIAKLTKLRSLNLR 653
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+TD + L +L L LS+ + ++N+GL S + + L L L
Sbjct: 654 KTEITDTGMVHLENLKPLKVLSLDETRVSNAGLKSLQSLQQLYRLGL 700
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 182/430 (42%), Gaps = 74/430 (17%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L G+ L ELD++ +TDAG+KHL + L L L+ T +G+ L+ L+ L VL
Sbjct: 831 LNGLKTLYELDVA-GADLTDAGLKHLKHVPELRVLKLNGGNFTEEGLKQLTQLKKLEVLQ 889
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVT 225
+ +T+ L L+ +T+L+ L +Q++ G L L LNL+ G+
Sbjct: 890 IENAGITNDQLIQLKEMTQLKIFILPQNQITEHGLKHLSGLTNLKVLNLSQNRIYSDGMV 949
Query: 226 KLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
L ++ +L L L + + D LE L + L GTT + L TSL L
Sbjct: 950 HLASLENLRSLALEHTRVADQGLEDLLRLPRLNTLILDGTTITDGGTPLLRKMTSL-GML 1008
Query: 285 DVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVE-----MVAC-------------- 323
++++ ++ L ++ L LDL+ + + +D V+ C
Sbjct: 1009 SLNSTYITDRGLKDLETLRGLYRLDLNDTKVSEDGVKNFQRSQPKCNIEYAAPLASSLQY 1068
Query: 324 -------VGANLRNLN------LSNTRFSSAGVGILAGH------------------LPN 352
GAN+ +N + + F + GI A H + +
Sbjct: 1069 VIQELKEAGANVNVINQGHHYVIESVEFPNHLQGIFAIHNRAEKAKVFDSCLKRISEMKD 1128
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
L+ LS+ + D+ + Y+ + L +D+S + I + L+ L +
Sbjct: 1129 LKRLSMHWAEFDNTKLEYIKNLTYLSELDLSGSRIPD------------QGIKDLKGLVN 1176
Query: 413 LERLNLEQTQVSDATLFPLSTFK--ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L++L LE TQ++DA + L+ + L L L ++ T L L + +L LS++
Sbjct: 1177 LQKLKLEHTQITDAGVAQLAQLQLNRLYSLDLDHSKTTAACLESLKDMQRLRFLSLQHLE 1236
Query: 471 LTNSGLGSFK 480
L+ + L FK
Sbjct: 1237 LSAADLEKFK 1246
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 164/374 (43%), Gaps = 58/374 (15%)
Query: 39 AHLADSLLRHLIRRRLIFPSLLEVFKHNAE--AIELRGENSVDAEWMAYLGAFRYLRSLN 96
A L D+ L+HL KH E ++L G N + E + L + L L
Sbjct: 845 ADLTDAGLKHL--------------KHVPELRVLKLNGGNFTE-EGLKQLTQLKKLEVLQ 889
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG 156
+ + +T+ L L MT LK L + ++T+ G+KHL ++ L+ L LS+ + +DG
Sbjct: 890 IENAG-ITNDQLIQLKEMTQLKIFILPQN-QITEHGLKHLSGLTNLKVLNLSQNRIYSDG 947
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ L+SL+NL L L V D L L L +L L L G+ +++ G +L+ L
Sbjct: 948 MVHLASLENLRSLALEHTRVADQGLEDLLRLPRLNTLILDGTTITDGGTPLLRKMTSLGM 1007
Query: 217 LNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGN----------ENKAPLA---- 257
L+L T G+ L + L L+L++ + N E APLA
Sbjct: 1008 LSLNSTYITDRGLKDLETLRGLYRLDLNDTKVSEDGVKNFQRSQPKCNIEYAAPLASSLQ 1067
Query: 258 ------KISLAGTTFINEREAFLYIET-----SLLSFLDVSNSSLSRFCF------LTQM 300
K + A IN+ ++ IE+ L + N + F +++M
Sbjct: 1068 YVIQELKEAGANVNVINQGHHYV-IESVEFPNHLQGIFAIHNRAEKAKVFDSCLKRISEM 1126
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K L+ L + + + +E + + L L+LS +R G+ L G L NL+ L L
Sbjct: 1127 KDLKRLSMHWAEFDNTKLEYIKNL-TYLSELDLSGSRIPDQGIKDLKG-LVNLQKLKLEH 1184
Query: 361 TQIDDYAISYMSMM 374
TQI D ++ ++ +
Sbjct: 1185 TQITDAGVAQLAQL 1198
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 163/369 (44%), Gaps = 51/369 (13%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L + LSR + D + L +S L+ L L++T ++ G+ +L+ L+ L+ L + P+
Sbjct: 264 LSSISLSRP-HIDDKSLACLKGLSGLKSLTLNQTSVSDQGLQILNELKGLTSLTIMQSPI 322
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
TD L L L++L L+L + V++ G + +L LNL TGVT ++ +
Sbjct: 323 TDAALPHLTGLSRLTSLNLARTAVTDAGMEHIIKLKQLKKLNLISTGVTS-AGMARVHAA 381
Query: 237 NLSNCTIDSILEGNENKAP---------LAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
L C I E + AP +A + G N+R ++ L S S
Sbjct: 382 -LPKCKI----ETGKATAPGDSTQAQAAIAALKAQGAHIQNQR---VFKNGKLTSEYFTS 433
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
Q+K L+H+ L++++ +T + L+
Sbjct: 434 IRFFGNQIVDAQVKHLKHV-------------------PRLKSVSFISTSITDDCTRHLS 474
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 407
G L LE L L GT I D ++ ++ + SL+ +D+S + I TD L +L
Sbjct: 475 G-LSELETLQLPGTAITDKGLATLNDLKSLENLDLSRSGI----------TDA--GLVSL 521
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
+ L+ LNL T+V+DA L L +L L L N S+T L +L +L KL L +
Sbjct: 522 KKFPQLKTLNLGSTRVTDAGLTHLKALPKLESLKLYNTSVTGTGLSELVTLPKLKTLDLS 581
Query: 468 DAVLTNSGL 476
LT +GL
Sbjct: 582 LTPLTETGL 590
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 25/272 (9%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
VK++ +G++ L ++ L+ L L D L L+ L + +P+TD L L+
Sbjct: 90 VKISGSGLQSLTNLKHLQNLEFQNCPLEDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLK 149
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
LT+LE L L+ +Q+S+ G L L+ LNL T IS+ +LS
Sbjct: 150 DLTQLEVLWLFATQISDSGLEHLNNLKELNSLNLYQT------KISNAGLTHLSELKKLK 203
Query: 246 ILEGNENKAPLAKISLAGTTFINE---REAFLYIETSLLSFLDVSNSSLS-----RFCFL 297
LE NE K++ AG + E L+ L + L V+ S R+ L
Sbjct: 204 QLEVNE-----TKVTSAGVAELQEAIPECKILFDRPVLPAHLKVARQVKSLGGFVRYQDL 258
Query: 298 TQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
Q + L + LS I D S +AC+ + L++L L+ T S G+ IL L L
Sbjct: 259 DQHRLLSSISLSRPHIDDKS---LACLKGLSGLKSLTLNQTSVSDQGLQIL-NELKGLTS 314
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L++ + I D A+ +++ + L ++++ T +
Sbjct: 315 LTIMQSPITDAALPHLTGLSRLTSLNLARTAV 346
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 58/300 (19%)
Query: 208 LKMFPRLSFLN--LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
LK +L F N ++ +G+ L N+ L+ L NC PL
Sbjct: 79 LKDIRKLGFYNVKISGSGLQSLTNLKHLQNLEFQNC-------------PL--------- 116
Query: 266 FINEREAFLYIET-SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVA 322
E +AF +++ L+ L V + L+ C L + LE L L ++ I D +E +
Sbjct: 117 ---EDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLKDLTQLEVLWLFATQISDSGLEHLN 173
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS---------- 372
+ L +LNL T+ S+AG+ L+ L L+ L ++ T++ ++ +
Sbjct: 174 NL-KELNSLNLYQTKISNAGLTHLS-ELKKLKQLEVNETKVTSAGVAELQEAIPECKILF 231
Query: 373 ---MMPSLKFIDISNTDIKGFIQQVGAETDLVLS-------------LTALQNLNHLERL 416
++P+ + + GF++ + +LS L L+ L+ L+ L
Sbjct: 232 DRPVLPAHLKVARQVKSLGGFVRYQDLDQHRLLSSISLSRPHIDDKSLACLKGLSGLKSL 291
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
L QT VSD L L+ K L L++ + +TD +L L+ LS+LT+L++ +T++G+
Sbjct: 292 TLNQTSVSDQGLQILNELKGLTSLTIMQSPITDAALPHLTGLSRLTSLNLARTAVTDAGM 351
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
+G ++ +S + +I D I +++ + ++ + N I G L +
Sbjct: 52 SGSKKKIDSVSFTNNKITDTQIKFINHLKDIRKLGFYNVKISGS------------GLQS 99
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L NL HL+ L + + D L F L HL +R+ LTD L L L++L L +
Sbjct: 100 LTNLKHLQNLEFQNCPLEDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLKDLTQLEVLWL 159
Query: 467 RDAVLTNSGLGSFKPPRSLKLLDLH 491
+++SGL + L L+L+
Sbjct: 160 FATQISDSGLEHLNNLKELNSLNLY 184
>gi|449436168|ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
gi|449509305|ref|XP_004163550.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
Length = 578
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 244/536 (45%), Gaps = 82/536 (15%)
Query: 3 RERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEV 62
R + L+ LCI+ C+ + Q S LP L+ +L L+ +L+ ++
Sbjct: 50 RGQCPSLMDLCIQRICKDLD-------QYDSFGMLPRDLSQLILNELVYSQLLTDISIQA 102
Query: 63 FKHNAEAIELRGE-NSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKEL 120
F+ A GE V+ W+ + + + S++++ VT S L L + L+ L
Sbjct: 103 FRDCALQDLHFGECPGVNDAWIDVISSQGSSVLSVDLSG-SEVTDSGLMNLRNCSNLQSL 161
Query: 121 DLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDL-------G 172
+L+ C ++D G+ H+ S L L + + +TA G+++ + L NL LDL G
Sbjct: 162 NLNFCEHISDRGLAHIGGFSRLTSLSFRKNSEITAQGMSVFAHLVNLIRLDLEKCPGIHG 221
Query: 173 GLP------------------VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
GL +TD ++ L LT L+ L + S+V++ G A LK +L
Sbjct: 222 GLVHLQGLRKLESLNIKWCNCITDSDIKPLSGLTNLKGLQISCSKVTDAGIAYLKGLHKL 281
Query: 215 SFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
S LNL VT L + +L+ LNLS C I +G+E + L + +
Sbjct: 282 SLLNLEGCPVTAACLYTLSALGALQYLNLSRCHITD--DGSEQFSGLGALKILN------ 333
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
L F D+++ L LT LE L+L S I DD + + + L+
Sbjct: 334 -----------LGFNDITDECLVHLKGLTN---LESLNLDSCRIEDDGLVNLKAL-HRLK 378
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM--------MPSLKFID 381
L LS+T S G+ L+G L NLE L+LS T + D + +S + + + D
Sbjct: 379 CLELSDTDVGSNGLRHLSG-LFNLEKLNLSFTVVTDIGLKKLSGLSSLKSLNLDTRQITD 437
Query: 382 ISNTDIKGFI-----QQVGAE-TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 435
I + G + GA TD L+N +L+ L + ++DA + +
Sbjct: 438 IGLASLTGLVGLTHLDLFGARITDS--GTNYLRNFKNLQSLEICGGGLTDAGVKNIKDLS 495
Query: 436 ELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L+ L+L +N +LTD SL +S L+ L +L+I ++ +T++GL K ++LK L L
Sbjct: 496 SLMVLNLSQNGNLTDKSLELISGLTGLVSLNISNSRITSAGLRHLKTLKNLKQLTL 551
>gi|46447144|ref|YP_008509.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400785|emb|CAF24234.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 670
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 204/453 (45%), Gaps = 84/453 (18%)
Query: 56 FPSLLEVFKHNAEAIELRGENS--VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
F +L F + EA+ EN+ DA +A L + L+ L + C +T + L LT
Sbjct: 257 FEKILNYFSNEVEALNF-SENAHLTDAHLLA-LKTCKNLKVLYLKKCCNLTDAGLPHLTP 314
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 172
+ L+ LDLS+C +TDAG+ HL + L L L E LT G+A L SL NL L+L
Sbjct: 315 LVALQYLDLSKCHNLTDAGLTHLTFLDALNYLGLGECYNLTDTGLAHLKSLINLQHLNLN 374
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
TD L L L L+YL+L SQ N A G+ L + +
Sbjct: 375 NCNFTDAGLAHLTPLVTLKYLNL--SQCYNLTDA----------------GLAHLTPLVN 416
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
L+ LNLS+CT +++++ L+
Sbjct: 417 LQQLNLSDCT------------------------------------------NLTDTGLA 434
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
+L+ + L+HL+L+ + D + + + NL+ LNLS T + AG+ L+ L
Sbjct: 435 ---YLSPLVTLQHLNLNVCKLIDAGLAHLTPL-VNLQQLNLSYCTNLTDAGLAHLST-LV 489
Query: 352 NLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
L+ L L G ++ D +++++ + +LK++++S GA + L AL++L
Sbjct: 490 TLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCH-----NLTGAGLAHLTPLVALKHL 544
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA 469
+ +LE DA L L+ L +L L LTD L L SL L +L +R
Sbjct: 545 DLSWNGDLE-----DAGLAHLTPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDLRGC 599
Query: 470 V-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
LT++G+ P +LK LDL G LT+ +
Sbjct: 600 YQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGL 632
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 168/360 (46%), Gaps = 22/360 (6%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L+ ++ + +L L+ L+++ C +T + L LT + L L L C
Sbjct: 292 NLKVLYLKKCCNLTDAGLPHLTPLVALQYLDLSKCHNLTDAGLTHLTFLDALNYLGLGEC 351
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSL 184
+TD G+ HL S+ L+ L L+ T G+A L+ L L L+L +TD L L
Sbjct: 352 YNLTDTGLAHLKSLINLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLSQCYNLTDAGLAHL 411
Query: 185 QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNL 238
L L+ L+L + +++ G A L L LNL G+ L + +L+ LNL
Sbjct: 412 TPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNL 471
Query: 239 SNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS---NSSLSR 293
S CT D+ L L + L G + + L +L++S N + +
Sbjct: 472 SYCTNLTDAGLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAG 531
Query: 294 FCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLP 351
LT + AL+HLDLS + + D + + + A L+ L+LS + AG+ L L
Sbjct: 532 LAHLTPLVALKHLDLSWNGDLEDAGLAHLTPLVA-LKYLDLSECYHLTDAGLAHLRS-LV 589
Query: 352 NLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
L+ L L G Q+ D I++++ + +LK++ D+KG A + SL ALQ+L
Sbjct: 590 ALKHLDLRGCYQLTDAGIAHLTPLVALKYL-----DLKGCPNLTDAGLAHLTSLIALQDL 644
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 43/310 (13%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L N DA +A+L L+ LN++ C +T + L LT + L++L+LS C
Sbjct: 367 NLQHLNLNNCNFTDAG-LAHLTPLVTLKYLNLSQCYNLTDAGLAHLTPLVNLQQLNLSDC 425
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSL 184
+TD G+ +L + TL+ L L+ L G+A L+ L NL L+L +TD L L
Sbjct: 426 TNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDAGLAHL 485
Query: 185 QVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLN 237
L L++LDL G ++++ G A L L +LNL+ G+ L + +L+ L+
Sbjct: 486 STLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLTPLVALKHLD 545
Query: 238 LSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSL--------LSFLDVSN 288
LS G+ A LA ++ L +++ E + + L L LD+
Sbjct: 546 LS-------WNGDLEDAGLAHLTPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDL-- 596
Query: 289 SSLSRFCF---------LTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNT-R 337
R C+ LT + AL++LDL + D + + + A L++L L N R
Sbjct: 597 ----RGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIA-LQDLELPNCQR 651
Query: 338 FSSAGVGILA 347
+ AG+ LA
Sbjct: 652 ITDAGLAHLA 661
>gi|168698161|ref|ZP_02730438.1| hypothetical protein GobsU_01477 [Gemmata obscuriglobus UQM 2246]
Length = 417
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 168/365 (46%), Gaps = 43/365 (11%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L G+ L L+L KVTD G+K L L L LS T LT G+ L+ + L+ L+
Sbjct: 69 LAGLKALTTLNLG-ATKVTDVGVKELAGFKALTTLNLSFTTLTDVGVKELAGFKALTTLE 127
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWT--GV 224
L VTD ++ L L L L L G++V++ G L LS L L A T GV
Sbjct: 128 LNYTDVTDAGVKELAGLKALTTLGLGGTKVTDAGVKELASLKELSVLGLFAAKAVTDAGV 187
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+L + +L L L L K++ AG + E + T L +
Sbjct: 188 KELAGLKALTTLELG----------------LTKVTDAG---VKELAGLKALTTLDLHYT 228
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
V+++ + L +KAL LDL ++ + D V+ +A + A L LNL + + AGV
Sbjct: 229 GVTDAGVKE---LAGLKALSVLDLGNTGVTDAGVKELAGLKA-LTTLNLGGAKVTDAGVK 284
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVL 402
LAG L L L+L GT++ D + ++ +L +D+S T + G + G +L
Sbjct: 285 ELAG-LKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTALTLL 343
Query: 403 SLTA----------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 452
L+ L L +L L L +T V+DA L L+ K L L L N +TD +
Sbjct: 344 DLSGTTLTDAGVKELAPLTNLTMLYLGETGVTDAGLKELAGLKNLTALFLFNTKVTDAGV 403
Query: 453 HQLSS 457
+L++
Sbjct: 404 KELTA 408
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 32/291 (10%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
L G DA + L + + L L + + VT + + L G+ L L+L KVTDA
Sbjct: 152 LGGTKVTDA-GVKELASLKELSVLGLFAAKAVTDAGVKELAGLKALTTLELG-LTKVTDA 209
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G+K L + L L L TG+T G+ L+ L+ LSVLDLG VTD ++ L L L
Sbjct: 210 GVKELAGLKALTTLDLHYTGVTDAGVKELAGLKALSVLDLGNTGVTDAGVKELAGLKALT 269
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DS 245
L+L G++V++ G L LS LNL T VT +L +L L+LS T+ D+
Sbjct: 270 TLNLGGAKVTDAGVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDA 329
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
++ L + L+GTT +++ + LT L
Sbjct: 330 GVKELAGLTALTLLDLSGTTL--------------------TDAGVKELAPLTN---LTM 366
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L L + + D ++ +A + NL L L NT+ + AGV L LP +I+
Sbjct: 367 LYLGETGVTDAGLKELAGL-KNLTALFLFNTKVTDAGVKELTAALPKCKIM 416
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 40/338 (11%)
Query: 156 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
G+ L+ L+ L+ L+LG VTD+ ++ L L L+L + +++ G L F L+
Sbjct: 65 GVKELAGLKALTTLNLGATKVTDVGVKELAGFKALTTLNLSFTTLTDVGVKELAGFKALT 124
Query: 216 FLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 270
L L +T GV +L + +L L L + G + A L ++S+ G
Sbjct: 125 TLELNYTDVTDAGVKELAGLKALTTLGLGGTKVTD--AGVKELASLKELSVLG------- 175
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
L + V+++ + L +KAL L+L + + D V+ +A + A L
Sbjct: 176 ---------LFAAKAVTDAGVKE---LAGLKALTTLELGLTKVTDAGVKELAGLKA-LTT 222
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L+L T + AGV LAG L L +L L T + D + ++ + +L +++ +
Sbjct: 223 LDLHYTGVTDAGVKELAG-LKALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKV--- 278
Query: 391 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
TD + L L L LNL T+V+D L L+ FK L L L +LTD
Sbjct: 279 -------TDA--GVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDA 329
Query: 451 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
+ +L+ L+ LT L + LT++G+ P +L +L
Sbjct: 330 GVKELAGLTALTLLDLSGTTLTDAGVKELAPLTNLTML 367
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 44/325 (13%)
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 229
P++D ++ L L L L+L ++V++ G L F L+ LNL++T GV +L
Sbjct: 60 PLSDAGVKELAGLKALTTLNLGATKVTDVGVKELAGFKALTTLNLSFTTLTDVGVKELAG 119
Query: 230 ISSLECL--NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+L L N ++ T + E KA L + L GT V+
Sbjct: 120 FKALTTLELNYTDVTDAGVKELAGLKA-LTTLGLGGT--------------------KVT 158
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
++ + L ++ L ++ + D V+ +A + A L L L T+ + AGV LA
Sbjct: 159 DAGVKELASLKELSVLGLF--AAKAVTDAGVKELAGLKA-LTTLELGLTKVTDAGVKELA 215
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 407
G L L L L T + D + ++ + +L +D+ NT + TD + L
Sbjct: 216 G-LKALTTLDLHYTGVTDAGVKELAGLKALSVLDLGNTGV----------TDA--GVKEL 262
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
L L LNL +V+DA + L+ K L L+L +TD L +L+ LT L +
Sbjct: 263 AGLKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLS 322
Query: 468 DAVLTNSGLGSFKPPRSLKLLDLHG 492
LT++G+ +L LLDL G
Sbjct: 323 FTTLTDAGVKELAGLTALTLLDLSG 347
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+EL + DA + L + L +L + + VT + + L + L L L VT
Sbjct: 126 LELNYTDVTDA-GVKELAGLKALTTLGLGGTK-VTDAGVKELASLKELSVLGLFAAKAVT 183
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DAG+K L + L L L T +T G+ L+ L+ L+ LDL VTD ++ L L
Sbjct: 184 DAGVKELAGLKALTTLELGLTKVTDAGVKELAGLKALTTLDLHYTGVTDAGVKELAGLKA 243
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCTID 244
L LDL + V++ G L L+ LNL GV +L + +L LNL +
Sbjct: 244 LSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTKVT 303
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
T + E F + T LSF ++++ + + AL
Sbjct: 304 D-------------------TGLKELAGFKALTTLDLSFTTLTDAGVKEL---AGLTALT 341
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
LDLS + + D V+ +A + NL L L T + AG+ LAG L NL L L T++
Sbjct: 342 LLDLSGTTLTDAGVKELAPL-TNLTMLYLGETGVTDAGLKELAG-LKNLTALFLFNTKVT 399
Query: 365 DYAISYMS-MMPSLKFI 380
D + ++ +P K +
Sbjct: 400 DAGVKELTAALPKCKIM 416
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%)
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L L LNL T ++D + L+ FK L L L +TD + +L+ L LT L +
Sbjct: 93 LAGFKALTTLNLSFTTLTDVGVKELAGFKALTTLELNYTDVTDAGVKELAGLKALTTLGL 152
Query: 467 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 509
+T++G+ + L +L L +T+ + + +
Sbjct: 153 GGTKVTDAGVKELASLKELSVLGLFAAKAVTDAGVKELAGLKA 195
>gi|383455271|ref|YP_005369260.1| hypothetical protein COCOR_03284 [Corallococcus coralloides DSM
2259]
gi|380733131|gb|AFE09133.1| leucine-rich repeat-containing protein [Corallococcus coralloides
DSM 2259]
Length = 614
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 191/411 (46%), Gaps = 48/411 (11%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L+ +++ L LSET L + +A L++ L L L G VTD L SLQ + L L L
Sbjct: 125 LVKDTSVVSLHLSETALGDEHLAALANATRLQALHLDGTRVTDAGLASLQGMPHLAVLRL 184
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGN 250
+ VS+RG A+L L L+L+ T V+ L + LE L+LS+ T+D + +
Sbjct: 185 DATAVSDRGLALLASLTTLRRLSLSGTSVSPRGLGLLAAQTELEWLDLSDTTVDDTVLAS 244
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDL 308
L + ++GT N L L +L ++ +S+S L ++ L+ L L
Sbjct: 245 LPGERLRTLVMSGTHVTNAGLGALR-RMPALRWLGLARTSVSDAGLAHLGALRMLDALHL 303
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
S+ + D + +A + A LR L LS TR GV LAG L LE+L L T I + A+
Sbjct: 304 GSTGVTDAGLIHLARLPA-LRVLVLSKTRIRGPGVRHLAG-LTQLEVLHLDDTSIGNAAL 361
Query: 369 SYMSMMPSLKFIDISNTDIKG----------FIQQVGAETDLVL---SLTALQNLNHLER 415
++ + L+ +++S T + G ++ +G + L L SL AL+ L L R
Sbjct: 362 RHLQGLQHLRDLELSRTAVTGSGLPALSGLQALESLGL-SGLALEDASLAALEPLERLSR 420
Query: 416 LNLEQTQV------------------------SDATLFPLSTFKELIHLSLRNASLTDVS 451
L+L T++ +D + L TF +L L LTD+
Sbjct: 421 LDLSATRIGPEALKQLGSRMVLRHLDLSRTDFNDGWVATLQTFTQLQSLRAIRTILTDLG 480
Query: 452 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
L QLS L +L +L + ++ SGL + L LDL G W+ + A L
Sbjct: 481 LGQLSELRELESLQVSGNPISGSGLVPLQKLPHLVKLDLGGTWMTDDGARL 531
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 205/450 (45%), Gaps = 59/450 (13%)
Query: 54 LIFPSLLEVFKHNAEAIELR-GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT 112
L PSLL + + + L E ++ E +A L L++L++ D RVT + L +L
Sbjct: 116 LPTPSLLALLVKDTSVVSLHLSETALGDEHLAALANATRLQALHL-DGTRVTDAGLASLQ 174
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
GM L L L V+D G+ L S++TL +L LS T ++ G+ LL++ L LDL
Sbjct: 175 GMPHLAVLRLD-ATAVSDRGLALLASLTTLRRLSLSGTSVSPRGLGLLAAQTELEWLDLS 233
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
V D VL SL +L L + G+ V+N G L+ P L +L LA T V+ ++
Sbjct: 234 DTTVDDTVLASLPG-ERLRTLVMSGTHVTNAGLGALRRMPALRWLGLARTSVSD-AGLAH 291
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
L L + +D++ G+ ++ AG + A + +LS + +
Sbjct: 292 LGALRM----LDALHLGSTG------VTDAGLIHLARLPALRVL---VLSKTRIRGPGVR 338
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
LTQ++ L HLD +S IG+ ++ + + +LR+L LS T + +G+ L+G L
Sbjct: 339 HLAGLTQLEVL-HLDDTS--IGNAALRHLQGL-QHLRDLELSRTAVTGSGLPALSG-LQA 393
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQQVGAE----------TDLV 401
LE L LSG ++D +++ + + L +D+S T I ++Q+G+ TD
Sbjct: 394 LESLGLSGLALEDASLAALEPLERLSRLDLSATRIGPEALKQLGSRMVLRHLDLSRTDFN 453
Query: 402 -------------------------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
L L L L LE L + +S + L PL
Sbjct: 454 DGWVATLQTFTQLQSLRAIRTILTDLGLGQLSELRELESLQVSGNPISGSGLVPLQKLPH 513
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L+ L L +TD L+ KL+ LS+
Sbjct: 514 LVKLDLGGTWMTDDGARLLAGFEKLSWLSL 543
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 179/404 (44%), Gaps = 64/404 (15%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ +VD +A L R LR+L V VT++ L AL M L+ L L+R V+DAG+
Sbjct: 234 DTTVDDTVLASLPGER-LRTL-VMSGTHVTNAGLGALRRMPALRWLGLART-SVSDAGLA 290
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
HL ++ L+ L L TG+T G+ L+ L L VL L + +R L LT+LE L
Sbjct: 291 HLGALRMLDALHLGSTGVTDAGLIHLARLPALRVLVLSKTRIRGPGVRHLAGLTQLEVLH 350
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSNCTIDSILEGNEN 252
L + + N L+ L L L+ T VT LP +S L+ L
Sbjct: 351 LDDTSIGNAALRHLQGLQHLRDLELSRTAVTGSGLPALSGLQAL---------------- 394
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
E+ LS L + ++SL L ++ L LDLS++
Sbjct: 395 ------------------------ESLGLSGLALEDASL---AALEPLERLSRLDLSATR 427
Query: 313 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
IG ++++ + LR+L+LS T F+ V L L+ L T + D + +S
Sbjct: 428 IGPEALKQLGSR-MVLRHLDLSRTDFNDGWVATLQ-TFTQLQSLRAIRTILTDLGLGQLS 485
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
+ L+ + +S I G L LQ L HL +L+L T ++D L+
Sbjct: 486 ELRELESLQVSGNPISGS------------GLVPLQKLPHLVKLDLGGTWMTDDGARLLA 533
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
F++L LSL + D SL L S LT +R V T++G+
Sbjct: 534 GFEKLSWLSLAGTRIGDESLVHLPG-SLLTLYLLRTKV-TDAGM 575
>gi|46447250|ref|YP_008615.1| hypothetical protein pc1616 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400891|emb|CAF24340.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 813
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 183/400 (45%), Gaps = 44/400 (11%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L ++ + +A+L LR L ++DCR +T + L LT + L+ LDLS C
Sbjct: 431 QHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKN 490
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-----GLPVTDLVL 181
+TD G+ HL S+ L+ L L LT G+A L+ L L LDLG +TD L
Sbjct: 491 LTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGL 550
Query: 182 RSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
L LT L++LDL W +++ G A L L L+L+W C NL++
Sbjct: 551 AHLSSLTALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSW-------------CENLTD 597
Query: 241 CTIDSILEGNENKAPLAK---ISLAGTTFINEREAFLYIETSL--LSFLDVSNSSLSRFC 295
EG PL +SL G+ +E L ++L LS D +
Sbjct: 598 -------EGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRINGYGLA 650
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLE 354
LT + LEHLDLS + NL++LNLS G+ L L NL+
Sbjct: 651 HLTSLVNLEHLDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTP-LMNLQ 709
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
L LSG + D ++Y++ SL +D+ + D+ G + + SL LQ+LN
Sbjct: 710 YLDLSGCINLTDQGLAYLT---SLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLS 766
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSL 452
E +NL +D L L + L +L LR ++TD L
Sbjct: 767 ECVNL-----TDTGLAHLVSLVNLQYLELRECKNITDAGL 801
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 213/433 (49%), Gaps = 38/433 (8%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L+ L++++C + + L L+ +T L+ LDLS TDAG+ HL + +L
Sbjct: 371 LAHLTSLTALQHLDLSECYLLKDTGLAHLSSLTALQYLDLSDSGNFTDAGLAHLTPLVSL 430
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ- 199
+ L LS++ LT DG+A L+ L L L L +TD L L L L +LDL +
Sbjct: 431 QHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKN 490
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLS-------NCTIDSI 246
+++ G L L +L NL G+ L +++LE L+L N T D +
Sbjct: 491 LTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGL 550
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS---NSSLSRFCFLTQMKAL 303
+ A L + L+ + + + L LD+S N + +LT + AL
Sbjct: 551 AHLSSLTA-LKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVAL 609
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGT- 361
++L L S I D+ +E +A + A LR+L+L++ R + G+ L L NLE L LSG
Sbjct: 610 QYLSLKGSDITDEGLEHLAHLSA-LRHLSLNDCRRINGYGLAHLTS-LVNLEHLDLSGCY 667
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+ + + Y+S + +L+ +++S + G D + LT L NL +L+
Sbjct: 668 HLPSFQLIYLSSLVNLQHLNLS--------ECFGLCHDGLEDLTPLMNLQYLDLSGC--I 717
Query: 422 QVSDATLFPLSTFK--ELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLG 477
++D L L++ +L HL L +TD L L+SL L +L++ + V LT++GL
Sbjct: 718 NLTDQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLA 777
Query: 478 SFKPPRSLKLLDL 490
+L+ L+L
Sbjct: 778 HLVSLVNLQYLEL 790
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 192/429 (44%), Gaps = 53/429 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ LN++ T + AL LK L L D G+ HL S++ L+ L LSE
Sbjct: 330 IEGLNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQHLDLSECY 389
Query: 152 LTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL 208
L D G+A LSSL L LDL TD L L L L++LDL S+ ++ G A L
Sbjct: 390 LLKDTGLAHLSSLTALQYLDLSDSGNFTDAGLAHLTPLVSLQHLDLSKSENLTGDGLAHL 449
Query: 209 KMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA 262
L L NL G+ L + +L L+LS C ++
Sbjct: 450 TPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSEC---------------KNLTDD 494
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-----IGDDS 317
G ++ A Y+ L +++++ L+ LT + LEHLDL + + DD
Sbjct: 495 GLVHLSSLVALQYLSLKLCE--NLTDAGLAH---LTPLTTLEHLDLGLDLGCCHNLTDDG 549
Query: 318 VEMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMP 375
+ ++ + A L++L+LS + AG+ L L L L LS + + D ++Y++ +
Sbjct: 550 LAHLSSLTA-LKHLDLSWRENLTDAGLAHLTP-LTALRHLDLSWCENLTDEGLAYLTPLV 607
Query: 376 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTF 434
+L+++ + +DI TD L L +L+ L L+L +++ L L++
Sbjct: 608 ALQYLSLKGSDI----------TD--EGLEHLAHLSALRHLSLNDCRRINGYGLAHLTSL 655
Query: 435 KELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHG 492
L HL L L L LSSL L +L++ + L + GL P +L+ LDL G
Sbjct: 656 VNLEHLDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSG 715
Query: 493 GWLLTEDAI 501
LT+ +
Sbjct: 716 CINLTDQGL 724
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 36 RLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSL 95
+L +L D+ L HL L +H ++L +++ + +A+L + L+ L
Sbjct: 511 KLCENLTDAGLAHLTP--------LTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALKHL 562
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
+++ +T + L LT +T L+ LDLS C +TD G+ +L + L+ L L + +T +
Sbjct: 563 DLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDE 622
Query: 156 G---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
G +A LS+L++LS+ D + L L L LE+LDL G P
Sbjct: 623 GLEHLAHLSALRHLSLNDCR--RINGYGLAHLTSLVNLEHLDLSGCY----------HLP 670
Query: 213 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK---ISLAGTTFINE 269
+ L+ ++ +L+ LNLS C +G E+ PL + L+G IN
Sbjct: 671 SFQLIYLS--------SLVNLQHLNLSEC-FGLCHDGLEDLTPLMNLQYLDLSGC--INL 719
Query: 270 REAFLYIETSL----LSFLDVSNS---SLSRFCFLTQMKALEHLDLSSSMIGDDS--VEM 320
+ L TSL L LD+S + + LT + L+HL+LS + D+ +
Sbjct: 720 TDQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHL 779
Query: 321 VACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEIL 356
V+ V NL+ L L + + AG LA ++ N +I+
Sbjct: 780 VSLV--NLQYLELRECKNITDAG---LAHYIQNQQII 811
>gi|46447590|ref|YP_008955.1| hypothetical protein pc1956 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401231|emb|CAF24680.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 659
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 221/457 (48%), Gaps = 57/457 (12%)
Query: 56 FPSLLEVFKHNAEAIELRGENS--VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
F ++ F + EA+ EN+ DA +A L + L+ L++ +CR +T + L L
Sbjct: 216 FQRIINQFSNEIEALNF-SENAHLTDAHLLA-LKNCKNLKELHLQECRNLTDAGLVHLAP 273
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 172
+ LK L+L+ C K+T+ G+ HL ++ L+ L L LT G+A L+ L L L+L
Sbjct: 274 LVALKHLNLNFCDKLTNTGLAHLRPLTALQHLNLGNCRNLTDAGLAHLTPLTALQHLNLN 333
Query: 173 GL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGV 224
+TD L L LT L++LDL + +++ G LK L LNL+ G+
Sbjct: 334 FCDKLTDTGLVRLSPLTALQHLDLSDCENLTDAGLVHLKPLVALQHLNLSCCENLTDAGL 393
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
L + +L+ L+LS+C ++ AG + A Y++ S +
Sbjct: 394 VHLKLLVALQHLDLSDCN---------------NLTDAGLAHLTPLTALQYLDLSYCN-- 436
Query: 285 DVSNSSLSRFCFLTQMKALEHLDL-SSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAG 342
+++++ L FLT AL+HLDL + DD + + + A L+ L+LS R + AG
Sbjct: 437 NLTDAGLVHLKFLT---ALQHLDLRGCDKVADDGLAHLTPLTA-LQALSLSQCRNLTDAG 492
Query: 343 VGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISN----TDIKGFIQ--QVG 395
+G L L L+ L LS + D + ++ + +L+ +D+S TD+ G + +
Sbjct: 493 LGHLKL-LTALQYLRLSQCWNLTDAGLIHLRPLVALQHLDLSYCGNLTDV-GLVHLTPLM 550
Query: 396 AETDLVLS---------LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN- 444
A L L+ L L++L L+ L+L Q ++DA L L L HL L
Sbjct: 551 ALQHLDLNYCENLTGDGLAHLRSLTTLQHLSLNQCWNLTDAGLVHLEPLTALQHLDLSYC 610
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFK 480
+ TDV L L+SL L +L++R +T+ GL FK
Sbjct: 611 GNFTDVGLVHLTSLMALQHLNLRGCDRVTDVGLALFK 647
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 126/279 (45%), Gaps = 35/279 (12%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL S +L L+ LL +H ++L N++ +A+L L+ L+++
Sbjct: 379 HLNLSCCENLTDAGLVHLKLLVALQH----LDLSDCNNLTDAGLAHLTPLTALQYLDLSY 434
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA 158
C +T + L L +T L+ LDL C KV D G+ HL ++ L+ L LS+ LT G+
Sbjct: 435 CNNLTDAGLVHLKFLTALQHLDLRGCDKVADDGLAHLTPLTALQALSLSQCRNLTDAGLG 494
Query: 159 LLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSF 216
L L L L L +TD L L+ L L++LDL + +++ G L L
Sbjct: 495 HLKLLTALQYLRLSQCWNLTDAGLIHLRPLVALQHLDLSYCGNLTDVGLVHLTPLMALQH 554
Query: 217 L------NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 270
L NL G+ L ++++L+ L+L+ C ++ AG +
Sbjct: 555 LDLNYCENLTGDGLAHLRSLTTLQHLSLNQC---------------WNLTDAGLVHLEPL 599
Query: 271 EAFLYIETSLL-SFLDVSNSSLSRFCFLTQMKALEHLDL 308
A +++ S +F DV LT + AL+HL+L
Sbjct: 600 TALQHLDLSYCGNFTDVG------LVHLTSLMALQHLNL 632
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 150/352 (42%), Gaps = 72/352 (20%)
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 228
+TD L +L+ L+ L L + +++ G L L LNL + TG+ L
Sbjct: 238 LTDAHLLALKNCKNLKELHLQECRNLTDAGLVHLAPLVALKHLNLNFCDKLTNTGLAHLR 297
Query: 229 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VS 287
+++L+ LNL NC ++ AG + A ++ L+F D ++
Sbjct: 298 PLTALQHLNLGNC---------------RNLTDAGLAHLTPLTALQHLN---LNFCDKLT 339
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRFSSAGVGI 345
++ L R L+ + AL+HLDLS D+ V + V L++LNLS
Sbjct: 340 DTGLVR---LSPLTALQHLDLSDCENLTDAGLVHLKPLVA--LQHLNLS----------- 383
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 405
+ D + ++ ++ +L+ +D+S+ + A + LT
Sbjct: 384 -------------CCENLTDAGLVHLKLLVALQHLDLSDCN-----NLTDAGLAHLTPLT 425
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNL 464
ALQ L+ L N ++DA L L L HL LR + D L L+ L+ L L
Sbjct: 426 ALQYLD-LSYCN----NLTDAGLVHLKFLTALQHLDLRGCDKVADDGLAHLTPLTALQAL 480
Query: 465 SIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
S+ LT++GLG K +L+ L L W LT+ ++ + P + + H
Sbjct: 481 SLSQCRNLTDAGLGHLKLLTALQYLRLSQCWNLTDAGLIH---LRPLVALQH 529
>gi|330842680|ref|XP_003293301.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
gi|325076385|gb|EGC30175.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
Length = 684
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 174/395 (44%), Gaps = 78/395 (19%)
Query: 41 LADSLLRHLIR-----RRLIFPSLLEVFKHNAEAIELRGENS---VDAEWMAYLGAFRYL 92
L+ L+RHLI RL L ++ +L N V+ +++ FRYL
Sbjct: 253 LSGDLIRHLIEVMAKNNRLTRTKLNQILSSGVRVFKLDLSNQSLIVNNDFLH--NCFRYL 310
Query: 93 ---RSLNVADCRRVTSSALWALTGMTC---LKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ +N ++C +T L L+ LDL +TD G K+L ++ LE+L+
Sbjct: 311 VEVQDVNFSNCINMTDYGLEVFKNEKFHRNLRVLDLRHNRNLTDVGCKNLKNLVNLEELY 370
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---------------------- 184
L T ++ G+A L L NL LD+ +TD + ++
Sbjct: 371 LGSTSISDLGVAFLKQLVNLKTLDVSRCKITDNAMVTISLFSKLTLLNLSETQITDVAIS 430
Query: 185 ---QVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVT--------KLPNISS 232
Q+LT ++YL L Q ++N+ L F ++ L++ T ++ +LPN+
Sbjct: 431 NIHQILTNIQYLYLSNCQKLTNKSLFFLTYFSKMRLLSITGTQISLNGFVHLKRLPNLLY 490
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
LE N C D + + L K+ L T+I E
Sbjct: 491 LELPN-RYCLNDQTIVYLNSLTKLKKLDLTDYTYITSIEP-------------------- 529
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
L +K LE L L+++ +GD SV + + + L L+L T +SAGV L N
Sbjct: 530 ----LDNLKYLEELLLANTRVGDSSVPAIKKMKS-LEVLSLDRTDITSAGVAGLVD--LN 582
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L+ LSL T+IDD +I+Y+S + SL+ ++IS+ +I
Sbjct: 583 LKSLSLMKTKIDDDSINYLSEIKSLRQLNISHNNI 617
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 327 NLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
NLR L+L + R + G L L NLE L L T I D ++++ + +LK +D+S
Sbjct: 340 NLRVLDLRHNRNLTDVGCKNLKN-LVNLEELYLGSTSISDLGVAFLKQLVNLKTLDVSRC 398
Query: 386 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL-STFKELIHLSLRN 444
I TD + +L + L LNL +TQ++D + + + +L L N
Sbjct: 399 KI----------TDNAMVTISL--FSKLTLLNLSETQITDVAISNIHQILTNIQYLYLSN 446
Query: 445 -ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
LT+ SL L+ SK+ LSI ++ +G K +L L+L + L + I+
Sbjct: 447 CQKLTNKSLFFLTYFSKMRLLSITGTQISLNGFVHLKRLPNLLYLELPNRYCLNDQTIV 505
>gi|46447549|ref|YP_008914.1| hypothetical protein pc1915 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401190|emb|CAF24639.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 683
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 204/417 (48%), Gaps = 47/417 (11%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ L+++ CR +T + L LT +T L+ LDL C +TDAG+ H
Sbjct: 286 NLTDA-GLAHLAPLTALQYLDLSHCRNLTDTGLAHLTPLTALQHLDLRVCKNITDAGLAH 344
Query: 136 LLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYL 193
L ++ L+ L LS+ G LT G+A L+ L L L+L +TD L L+ LT L+ L
Sbjct: 345 LAPLTALQNLDLSDCGHLTDAGLAYLTPLTALQHLNLYFCFNLTDAGLVHLRPLTALQTL 404
Query: 194 DL---WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTID 244
L W +++ G A L L LNL+ G+ L +++L+ LNLS C +
Sbjct: 405 GLSQCWN--LTDTGLAHLTPLTALQHLNLSRCYKLTDAGLAHLTPLTALQHLNLSYCE-N 461
Query: 245 SILEGNENKAPLA-----------KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
+G + APL K++ AG + A ++ S ++++ L+R
Sbjct: 462 LTDDGLAHLAPLTALQYLRLSQCWKLTDAGLAHLTPLTALQHLNLS--RCYKLTDAGLAR 519
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
LT + AL+HLDL + D+ + L++L L+N ++ + L L
Sbjct: 520 ---LTPLTALQHLDLKYCINLTDAGLARLTPLSGLQHLALTNCKYLTDAGLAHLTLLTAL 576
Query: 354 EILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLN 411
+ L+L+ + + D +++++ + +L+ +D+S + TD L+ LT L L
Sbjct: 577 QYLALANCKNLTDVGLAHLTPLTALQHLDLS---------ECRHLTDAGLAHLTPLTGLQ 627
Query: 412 HLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSI 466
H LNL + ++DA L LS L HL+L S LTD L + +L+ NL I
Sbjct: 628 H---LNLSWCRNLTDAGLAHLSPLSVLQHLALSQCSRLTDDGLDRFKTLATSLNLEI 681
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 209/443 (47%), Gaps = 79/443 (17%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L+G ++ +A+L L+ LN++ CR +T + L L +T L+ LDLS C
Sbjct: 250 NLKVLYLQGCRNLTDAGLAHLTPLTGLQHLNLSWCRNLTDAGLAHLAPLTALQYLDLSHC 309
Query: 126 VKVTDAGMKHLLSISTLEKLWL------SETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
+TD G+ HL ++ L+ L L ++ GL +A L++LQNL + D G L TD
Sbjct: 310 RNLTDTGLAHLTPLTALQHLDLRVCKNITDAGLA--HLAPLTALQNLDLSDCGHL--TDA 365
Query: 180 VLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISS 232
L L LT L++L+L+ +++ G L+ L L NL TG+ L +++
Sbjct: 366 GLAYLTPLTALQHLNLYFCFNLTDAGLVHLRPLTALQTLGLSQCWNLTDTGLAHLTPLTA 425
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
L+ LNLS C K++ AG
Sbjct: 426 LQHLNLSRC---------------YKLTDAG----------------------------- 441
Query: 293 RFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHL 350
LT + AL+HL+LS + DD + +A + A L+ L LS + + AG+ L L
Sbjct: 442 -LAHLTPLTALQHLNLSYCENLTDDGLAHLAPLTA-LQYLRLSQCWKLTDAGLAHLTP-L 498
Query: 351 PNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L+ L+LS ++ D ++ ++ + +L+ + D+K I A + LT L
Sbjct: 499 TALQHLNLSRCYKLTDAGLARLTPLTALQHL-----DLKYCINLTDAG---LARLTPLSG 550
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD 468
L HL N + ++DA L L+ L +L+L N +LTDV L L+ L+ L +L + +
Sbjct: 551 LQHLALTNCK--YLTDAGLAHLTLLTALQYLALANCKNLTDVGLAHLTPLTALQHLDLSE 608
Query: 469 A-VLTNSGLGSFKPPRSLKLLDL 490
LT++GL P L+ L+L
Sbjct: 609 CRHLTDAGLAHLTPLTGLQHLNL 631
>gi|357150116|ref|XP_003575347.1| PREDICTED: F-box/LRR-repeat protein 14-like [Brachypodium
distachyon]
Length = 582
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 239/541 (44%), Gaps = 96/541 (17%)
Query: 5 RESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFK 64
R L+ LC+ C+ + K+ S LP+ L+ + L+ + + LE F+
Sbjct: 56 RCPSLMELCVAKVCKD---ISKYS----SFAVLPSDLSQQVFNQLVDSNCLKEASLETFR 108
Query: 65 HNAEAIELRGE-NSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKELDL 122
A GE V WM + + R L S++++ C VT S L L + ++ L
Sbjct: 109 DCALHDICLGEFPGVKDAWMEVVASQRQSLLSVDIS-CSEVTDSGLNLLRDCSNMQSLVC 167
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL-------GGL 174
+ C ++++ G+ L S L L + G+TA+G+ + ++L NL LDL GGL
Sbjct: 168 NYCDQISEHGLGVLSGFSNLTSLSFKRSDGVTAEGMRVFANLVNLVNLDLERCLKIHGGL 227
Query: 175 ------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+TD ++ L LT L+ L L ++++ G + L+ +L
Sbjct: 228 VHLKGLRKLESINMRYCNNITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLRGLSKLIR 287
Query: 217 LNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
LNL VT + ++SL LNL+ C I EG E+ L K+ +
Sbjct: 288 LNLESCPVTAACLVDISGLASLMLLNLNRCGIYD--EGCESFKDLKKLKVLNL------- 338
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
F YI + L L ++ LE L+L S +GD + + L++L
Sbjct: 339 GFNYITDACL-------------VHLKELINLEFLNLDSCKVGD-AGLLHLKGLVLLKSL 384
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
LS+T S G+ L+G L L+ + LS T + D + +S + SLK +++ + I
Sbjct: 385 ELSDTEVGSNGLRHLSG-LRTLQRIDLSFTLVTDTGMKKISALSSLKSVNLDSR----LI 439
Query: 392 QQVGAETDLVLSLTALQNLNHLERL----------------NLEQTQVSDATL--FPLST 433
VG + +LT L L HL+ NLE + ++ +
Sbjct: 440 TDVG-----LAALTGLTGLTHLDLFGARITDNGASCFRYFKNLESLEACGGSITDVGVKN 494
Query: 434 FKELIHLSL----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
KEL L+L +NA+LTD +L +S L+ L +L++ ++ ++N+GL ++L+ L
Sbjct: 495 IKELKALTLLNLSQNANLTDKTLELISGLTALVSLNVSNSRVSNAGLRHLNALQNLRSLT 554
Query: 490 L 490
L
Sbjct: 555 L 555
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 189/413 (45%), Gaps = 43/413 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + + V AE M L +L++ C ++ L L G+ L+ +++ C
Sbjct: 186 NLTSLSFKRSDGVTAEGMRVFANLVNLVNLDLERCLKI-HGGLVHLKGLRKLESINMRYC 244
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ +K+L ++ L++L LS +T G++ L L L L+L PVT L +
Sbjct: 245 NNITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLRGLSKLIRLNLESCPVTAACLVDIS 304
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L + + G K +L LNL + +T L + +LE LNL +
Sbjct: 305 GLASLMLLNLNRCGIYDEGCESFKDLKKLKVLNLGFNYITDACLVHLKELINLEFLNLDS 364
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C K+ AG + +E LS +V ++ L L+ +
Sbjct: 365 C----------------KVGDAGLLHLKGLVLLKSLE---LSDTEVGSNGLRH---LSGL 402
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+ L+ +DLS +++ D ++ ++ + ++L+++NL + + G+ L G L L L L G
Sbjct: 403 RTLQRIDLSFTLVTDTGMKKISAL-SSLKSVNLDSRLITDVGLAALTG-LTGLTHLDLFG 460
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I D S +L+ ++ G I VG + ++ L L LNL Q
Sbjct: 461 ARITDNGASCFRYFKNLESLEACG----GSITDVGVKN--------IKELKALTLLNLSQ 508
Query: 421 T-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
++D TL +S L+ L++ N+ +++ L L++L L +L++ +T
Sbjct: 509 NANLTDKTLELISGLTALVSLNVSNSRVSNAGLRHLNALQNLRSLTLDSCRVT 561
>gi|225463572|ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
gi|297743556|emb|CBI36423.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 250/525 (47%), Gaps = 60/525 (11%)
Query: 3 RERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEV 62
R + L+ LCI + E + K+ + LP ++ + L+ + + L+
Sbjct: 50 RGQCPSLMELCIY---KIREDIDKYT----TFSMLPRDISQQIFNELVFSQCLTDVSLKA 102
Query: 63 FKHNA-EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKEL 120
F+ A + I L V WM + + L S++++ +T+S L L T L+ L
Sbjct: 103 FQDCALQDIYLGEYPGVSDSWMDVISSQGVSLLSVDLSG-SEITNSGLIHLKDCTNLQAL 161
Query: 121 DLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDL-------G 172
+L+ C +++D G+KH+ +S L L + +TA G++ SSL NL LDL G
Sbjct: 162 NLNYCDQISDHGLKHISGLSNLTTLSFRRNNAITAQGMSAFSSLVNLVKLDLERCPGIHG 221
Query: 173 GL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
GL +TD L+ L LT L+ L++ S+V++ G A LK +L
Sbjct: 222 GLIHLKGLTKLESLNINMCHCITDADLKPLSGLTNLKGLEISRSKVTDDGVAYLKGLHKL 281
Query: 215 SFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL---EGNENKAPLAKISLAGTTFINERE 271
+ LN+ VT S + +L + ++ + +G EN A + + F + +
Sbjct: 282 ALLNMEGCPVTAACLESLSDLPSLLSLNLNRSMLSDDGCENFARQENLRVLNLGFNDLTD 341
Query: 272 AFLYIETSLLSFLDVSNSSLSRFC-----FLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
A L + L+ L+ N R C LT ++ L+ L+LS + +G + + ++ + A
Sbjct: 342 ACL-VHLKGLTNLESLNLDSCRICDEGLANLTGLRHLKCLELSDTEVGSNGLRHLSGL-A 399
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL ++NLS T + +G+ L+ L +L+ L+L QI D ++ ++ + L +D+
Sbjct: 400 NLESINLSFTAVTDSGLRKLS-ALSSLKSLNLDARQITDAGLAALTSLTGLTHLDLFGAR 458
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNA 445
I TD S L+N +L+ L + ++DA + + L L+L +N
Sbjct: 459 I----------TDSGTSY--LRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQNC 506
Query: 446 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+LTD SL +S L+ L +LS+ ++ +TN+GL K ++LK L L
Sbjct: 507 NLTDKSLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTL 551
>gi|325110089|ref|YP_004271157.1| hypothetical protein Plabr_3538 [Planctomyces brasiliensis DSM
5305]
gi|324970357|gb|ADY61135.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 451
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 167/366 (45%), Gaps = 25/366 (6%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R V+ D + HL +++L+L G T+ G++ L L +L +L L + D L
Sbjct: 91 RSVEAADDALTHLTGTPQVQELYLFGPGFTSAGMSDLQGLNDLRLLSLEKTLIDDAGLVE 150
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 238
+ + L L L + VS+ G L +L L+L +T G+ L + S+ + L
Sbjct: 151 IGRIPSLVALRLRQTDVSDEGLKALGGLDKLRELDLRFTNISDEGLPALAELDSISTVKL 210
Query: 239 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI--ETSLLSFLDVSNSSL--SRF 294
I EG + A + I G N L E S L L++ ++ + +
Sbjct: 211 DRTKISD--EGVKTLAAIPTIRGLGLNLTNLTNTALEALKERSELVTLEMDDTQIDDAGI 268
Query: 295 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
L M L++L L +GD+ E++ + +L+ L++ +T S AG LA +L NLE
Sbjct: 269 VHLEGMSNLQNLSLRRDDVGDEGFEIIGKL-KSLKRLSIRDTVISDAGCAHLA-NLENLE 326
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 414
L L+ T I D ++++ + +LK +++ T I LQNL L
Sbjct: 327 TLDLNETFIGDEGVAHLGGLKNLKTLELWFTRIT------------PQGTAPLQNLTALR 374
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
LNLE T++ D+ L PL+ EL L+L+ +TD L L L L + + + +++
Sbjct: 375 ELNLEDTRIDDSALEPLAGLTELRTLNLKLTPITDEGLVHLHGLKNLEFVHLGNTQVSDE 434
Query: 475 GLGSFK 480
G + K
Sbjct: 435 GTDALK 440
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 60/325 (18%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
V+ L AL G+ L+ELDL R ++D G+ L + ++ + L T ++ +G+ L++
Sbjct: 167 VSDEGLKALGGLDKLRELDL-RFTNISDEGLPALAELDSISTVKLDRTKISDEGVKTLAA 225
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
+ + L L +T+ L +L+ ++L L++ +Q+ +
Sbjct: 226 IPTIRGLGLNLTNLTNTALEALKERSELVTLEMDDTQIDD-------------------A 266
Query: 223 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
G+ L +S+L+ L+L + G+E + K+ L
Sbjct: 267 GIVHLEGMSNLQNLSLRRDDV-----GDEGFEIIGKL-------------------KSLK 302
Query: 283 FLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L + ++ +S L ++ LE LDL+ + IGD+ V + + NL+ L L TR +
Sbjct: 303 RLSIRDTVISDAGCAHLANLENLETLDLNETFIGDEGVAHLGGL-KNLKTLELWFTRITP 361
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G L +L L L+L T+IDD A+ ++ + L+ +++ T I TD
Sbjct: 362 QGTAPLQ-NLTALRELNLEDTRIDDSALEPLAGLTELRTLNLKLTPI----------TD- 409
Query: 401 VLSLTALQNLNHLERLNLEQTQVSD 425
L L L +LE ++L TQVSD
Sbjct: 410 -EGLVHLHGLKNLEFVHLGNTQVSD 433
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 315 DDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
D S E + +G LR L+L T S G+ LA L ++ + L T+I D + ++
Sbjct: 166 DVSDEGLKALGGLDKLRELDLRFTNISDEGLPALA-ELDSISTVKLDRTKISDEGVKTLA 224
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
+P+++ + ++ T++ +L AL+ + L L ++ TQ+ DA + L
Sbjct: 225 AIPTIRGLGLNLTNLTNT------------ALEALKERSELVTLEMDDTQIDDAGIVHLE 272
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L +LSLR + D + L L LSIRD V++++G +L+ LDL+
Sbjct: 273 GMSNLQNLSLRRDDVGDEGFEIIGKLKSLKRLSIRDTVISDAGCAHLANLENLETLDLNE 332
Query: 493 GWLLTED-AILQFCKMHPRIEVW 514
++ E A L K +E+W
Sbjct: 333 TFIGDEGVAHLGGLKNLKTLELW 355
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 60 LEVFKHNAEAIELRGENS-VDAEWMAYLGAFRYLRSLNVADCRR--VTSSALWALTGMTC 116
LE K +E + L +++ +D + +L L++L++ RR V + +
Sbjct: 244 LEALKERSELVTLEMDDTQIDDAGIVHLEGMSNLQNLSL---RRDDVGDEGFEIIGKLKS 300
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
LK L + V ++DAG HL ++ LE L L+ET + +G+A L L+NL L+L +
Sbjct: 301 LKRLSIRDTV-ISDAGCAHLANLENLETLDLNETFIGDEGVAHLGGLKNLKTLELWFTRI 359
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 231
T LQ LT L L+L +++ + L L LNL T G+ L +
Sbjct: 360 TPQGTAPLQNLTALRELNLEDTRIDDSALEPLAGLTELRTLNLKLTPITDEGLVHLHGLK 419
Query: 232 SLECLNLSNCTI 243
+LE ++L N +
Sbjct: 420 NLEFVHLGNTQV 431
>gi|356562920|ref|XP_003549716.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 580
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 236/521 (45%), Gaps = 64/521 (12%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA- 67
L+ LCI + E K+ S LP ++ + L+ + LE F+ A
Sbjct: 58 LMDLCIN---KMREDFHKYN----SFSILPRDISQQIFNELVDSHCLTQLSLEAFRDCAL 110
Query: 68 EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
+ I+L V +WM + + L S++V+ +VT + L L + L+ L L+ C
Sbjct: 111 QDIDLGEYVGVSDDWMDVISSQGLSLLSVDVSG-SQVTDNGLRFLKDCSNLQALTLNFCD 169
Query: 127 KVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL-------GGLP--- 175
+ ++ G+KH+ +S L L + ++ + DG+ S+L NL LDL GG
Sbjct: 170 QFSEYGLKHISGLSNLTSLSIRKSSTVKPDGMRAFSNLFNLEKLDLERCSDIHGGFVHLK 229
Query: 176 ---------------VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
V D ++S+ L L+ L + S +++ G L+ L+ LN+
Sbjct: 230 GLKKLEYLNIGCCKCVMDSDMKSISELINLKELQISNSSITDIGITYLRGLKMLTTLNVE 289
Query: 221 WTGVTK-----LPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFL 274
+T + ++SL CLNL+ C + D E L ++SLA + L
Sbjct: 290 GCNITAACLEFIHALASLACLNLNRCGLSDDGFEKISGLKNLKRLSLAFNRITDACLVHL 349
Query: 275 YIETSL----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
T+L L + + + L+ LT +K+L LS + IG+ + ++ + L +
Sbjct: 350 KGLTNLEYLNLDYCRIGDDGLANLTGLTLLKSLV---LSDTDIGNSGLRHISGL-KKLED 405
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
LNLS T + G+ L+G L L+ L+L QI D ++ ++ + L +D+
Sbjct: 406 LNLSFTTVTDHGLKRLSG-LTQLKSLNLDARQITDAGLANLTSLSGLIALDL----FGAR 460
Query: 391 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTD 449
I G T L++ L+ L + ++DA + + L L+L +N +LTD
Sbjct: 461 ISDNGT--------TFLRSFKILQSLEICGGGLTDAGVKNIREIVSLTQLNLSQNCNLTD 512
Query: 450 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+L +S ++ L +L++ ++ +TN GL KP ++L+ L L
Sbjct: 513 KTLELISGMTALRSLNVSNSRITNEGLRYLKPLKNLRTLTL 553
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 165/372 (44%), Gaps = 72/372 (19%)
Query: 55 IFPSLLEVFKH--NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT 112
+ P + F + N E ++L + + ++ +L + L LN+ C+ V S + +++
Sbjct: 196 VKPDGMRAFSNLFNLEKLDLERCSDIHGGFV-HLKGLKKLEYLNIGCCKCVMDSDMKSIS 254
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLL------------------------SISTLEKLWLS 148
+ LKEL +S +TD G+ +L ++++L L L+
Sbjct: 255 ELINLKELQISN-SSITDIGITYLRGLKMLTTLNVEGCNITAACLEFIHALASLACLNLN 313
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD-------------- 194
GL+ DG +S L+NL L L +TD L L+ LT LEYL+
Sbjct: 314 RCGLSDDGFEKISGLKNLKRLSLAFNRITDACLVHLKGLTNLEYLNLDYCRIGDDGLANL 373
Query: 195 ----------LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLS 239
L + + N G + +L LNL++T VT +L ++ L+ LNL
Sbjct: 374 TGLTLLKSLVLSDTDIGNSGLRHISGLKKLEDLNLSFTTVTDHGLKRLSGLTQLKSLNLD 433
Query: 240 NCTI-DSILEGNENKAPL-------AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
I D+ L + + L A+IS GTTF+ + +E D ++
Sbjct: 434 ARQITDAGLANLTSLSGLIALDLFGARISDNGTTFLRSFKILQSLEICGGGLTDAGVKNI 493
Query: 292 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 351
LTQ+ ++ +L+ D ++E+++ + A LR+LN+SN+R ++ G+ L L
Sbjct: 494 REIVSLTQLNLSQNCNLT-----DKTLELISGMTA-LRSLNVSNSRITNEGLRYLK-PLK 546
Query: 352 NLEILSLSGTQI 363
NL L+L ++
Sbjct: 547 NLRTLTLESCKV 558
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+V + L L+SLN+ D R++T + L LT ++ L LDL +++D G L
Sbjct: 412 TVTDHGLKRLSGLTQLKSLNL-DARQITDAGLANLTSLSGLIALDLFG-ARISDNGTTFL 469
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDL 195
S L+ L + GLT G+ + + +L+ L+L +TD L + +T L L++
Sbjct: 470 RSFKILQSLEICGGGLTDAGVKNIREIVSLTQLNLSQNCNLTDKTLELISGMTALRSLNV 529
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
S+++N G LK L L L VT I L+ +L N
Sbjct: 530 SNSRITNEGLRYLKPLKNLRTLTLESCKVTA-SEIKKLQSTDLPN 573
>gi|356519278|ref|XP_003528300.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 2 [Glycine max]
Length = 529
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 217/505 (42%), Gaps = 76/505 (15%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNA- 67
L+ LCI+ + E + K+ + LP ++ + +L+ R + + LE F+ A
Sbjct: 55 LLDLCIQ---KINEDIDKYN----TFSMLPRDISQLIFNNLVYSRRLTSASLEAFRDCAL 107
Query: 68 EAIELRGENSVDAEWMA-------------------------YLGAFRYLRSLNVADCRR 102
+ + L + V+ WM YL L SLN+ C +
Sbjct: 108 QDLYLGEYDGVNDNWMGVISSQGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQ 167
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
++ L ++G++ L L R ++ GM + L KL L G+ L
Sbjct: 168 ISDRGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRG 227
Query: 163 LQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L L+L +TD ++ L L L+ L++ S+V++ G + LK +L+ LNL
Sbjct: 228 LTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEG 287
Query: 222 TGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
VT L + +L LNL+ C +S G I+ E +
Sbjct: 288 CLVTAACLDSLAELPALSNLNLNRCN----------------LSDNGCKKISRLENLKVL 331
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
L F ++++ L LT+ LE L+L S IGD+ + +A + L L LS+T
Sbjct: 332 N---LGFNVITDACLVHLKGLTK---LESLNLDSCKIGDEGLVNLAGL-EQLNCLELSDT 384
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 396
S G+ L+G L L L L G +I D+ +Y+ +L+ ++I G + G
Sbjct: 385 EVGSNGLHHLSG-LTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICG----GVLTDAGV 439
Query: 397 ETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
+ ++ L+ L LNL Q + ++D TL +S L+ L++ N+ +T+ L L
Sbjct: 440 KN--------IKELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHL 491
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFK 480
+L L +L++ +T + + K
Sbjct: 492 KTLKNLRSLTLESCKVTANDIKKLK 516
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 172/398 (43%), Gaps = 65/398 (16%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ R +S+ A+ M+ L L++ C + L L G+T L+ L+L C
Sbjct: 181 NLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGI-HGGLVHLRGLTKLESLNLKWC 239
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD MK L +++L+ L +S + +T GI+ L LQ L++L+L G VT L SL
Sbjct: 240 NCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLA 299
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L +S+ G + L LNL + +T L ++ LE LNL +
Sbjct: 300 ELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDS 359
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I G+E ++LAG L Q+
Sbjct: 360 CKI-----GDE-----GLVNLAG---------------------------------LEQL 376
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
LE LS + +G + + ++ + L +L+L R + G L NL L + G
Sbjct: 377 NCLE---LSDTEVGSNGLHHLSGL-TGLTDLDLFGARITDFGTNYLK-KFKNLRSLEICG 431
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+ D + + + SL +++S Q TD L L + L L LN+
Sbjct: 432 GVLTDAGVKNIKELSSLVCLNLS---------QNSNLTDKTLEL--ISGLTGLVSLNVSN 480
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+++++A L L T K L L+L + +T + +L S+
Sbjct: 481 SRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSI 518
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 164/365 (44%), Gaps = 48/365 (13%)
Query: 142 LEKLWLSE-TGLTADGIALLSSLQNLSVL--DLGGLPVTDLVLRSLQVLTKLEYLDL-WG 197
L+ L+L E G+ + + ++SS Q S+L DL G VTD L L+ L L+L +
Sbjct: 107 LQDLYLGEYDGVNDNWMGVISS-QGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYC 165
Query: 198 SQVSNRGAAVLKMFPRLSFLN------LAWTGVTKLPNISSLECLNLSNC-TIDSILEGN 250
Q+S+RG + L+ L+ ++ G++ + +L L+L C I L
Sbjct: 166 DQISDRGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHL 225
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
L ++L I + + E + L L++S+S ++ F ++ +K L+ L L
Sbjct: 226 RGLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDF-GISFLKGLQKLAL-- 282
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
LNL ++A + LA LP L L+L+ + D
Sbjct: 283 --------------------LNLEGCLVTAACLDSLA-ELPALSNLNLNRCNLSDNGCKK 321
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
+S + +LK +++ GF A L L+ L LE LNL+ ++ D L
Sbjct: 322 ISRLENLKVLNL------GFNVITDA------CLVHLKGLTKLESLNLDSCKIGDEGLVN 369
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L+ ++L L L + + LH LS L+ LT+L + A +T+ G K ++L+ L++
Sbjct: 370 LAGLEQLNCLELSDTEVGSNGLHHLSGLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEI 429
Query: 491 HGGWL 495
GG L
Sbjct: 430 CGGVL 434
>gi|226534362|gb|ACO71457.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LTKLEYLD+WGS V+N GA + F LS+LNL+WT VT+ PNI LECL+++ C I SI
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSYLNLSWTSVTQTPNIPHLECLHMNKCDIVSI 61
Query: 247 LEGNENK-APLAKISLAGTTFINEREAF 273
L+ + + A L K+ L+G TF E E+F
Sbjct: 62 LKTHSSALASLKKLVLSGATFSAETESF 89
>gi|168701673|ref|ZP_02733950.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 367
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 154/350 (44%), Gaps = 56/350 (16%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+VTD G+K L + L L L T +T G+ L+ L+ L+ LDL VTD ++ L
Sbjct: 60 RVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDAGMKELAA 119
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
L L L L G V++ G L +L+ L+L+ T
Sbjct: 120 LNNLTTLRLSGKGVTDAGLKELAALKKLANLDLSHT------------------------ 155
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
K++ AG + E A + T L+ +V+++ L L +K L L
Sbjct: 156 -----------KVTDAG---LKELAALKGLTTIRLNNTEVTDAGLKE---LAALKKLADL 198
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
DLS + + D ++ +A + L L L T+ + AG+ LAG NL L L+GT + D
Sbjct: 199 DLSQTKVTDAGLKELAAL-KGLTCLGLLGTKVTDAGLKELAG--LNLTDLHLAGTPVTDA 255
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
+ ++ + +L + + T + G + L L L L L L T+V+DA
Sbjct: 256 GLKELAALKNLTHLYLFGTKVTG------------VGLKELSGLKGLTTLYLNNTKVTDA 303
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+ LS K L L L +TD + L+ L LTNL + +T++G+
Sbjct: 304 GVKELSGLKGLTTLDLSYTEMTDAGVKALAGLKGLTNLELYGTKVTDAGV 353
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 16/289 (5%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT + + L G+ L LDL+ VTDAGMK L +++ L L LS G+T G+ L++
Sbjct: 85 VTDAGVKELAGLKGLTTLDLN-STSVTDAGMKELAALNNLTTLRLSGKGVTDAGLKELAA 143
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+ L+ LDL VTD L+ L L L + L ++V++ G L +L+ L+L+ T
Sbjct: 144 LKKLANLDLSHTKVTDAGLKELAALKGLTTIRLNNTEVTDAGLKELAALKKLADLDLSQT 203
Query: 223 GVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF----INEREAF 273
VT +L + L CL L + L + LAGT + E A
Sbjct: 204 KVTDAGLKELAALKGLTCLGLLGTKVTDAGLKELAGLNLTDLHLAGTPVTDAGLKELAAL 263
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
+ L V+ L L+ +K L L L+++ + D V+ ++ + L L+L
Sbjct: 264 KNLTHLYLFGTKVTGVGLKE---LSGLKGLTTLYLNNTKVTDAGVKELSGL-KGLTTLDL 319
Query: 334 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM-SMMPSLKFID 381
S T + AGV LAG L L L L GT++ D + + S +P K ++
Sbjct: 320 SYTEMTDAGVKALAG-LKGLTNLELYGTKVTDAGVKELNSALPKCKILN 367
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 198 SQVSNRGAAVLKMFPRLSFLNL--AW---TGVTKLPNISSLECLNLSNCTIDSILEGNEN 252
++V+++G L L+ LNL W GV +L + L L+L++ ++
Sbjct: 59 TRVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTD------- 111
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
AG + E A + T LS V+++ L L +K L +LDLS +
Sbjct: 112 ---------AG---MKELAALNNLTTLRLSGKGVTDAGLKE---LAALKKLANLDLSHTK 156
Query: 313 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
+ D ++ +A + L + L+NT + AG+ LA L L L LS T++ D + ++
Sbjct: 157 VTDAGLKELAAL-KGLTTIRLNNTEVTDAGLKELAA-LKKLADLDLSQTKVTDAGLKELA 214
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
+ L + + T + TD L L LN L L+L T V+DA L L+
Sbjct: 215 ALKGLTCLGLLGTKV----------TDA--GLKELAGLN-LTDLHLAGTPVTDAGLKELA 261
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
K L HL L +T V L +LS L LT L + + +T++G+ + L LDL
Sbjct: 262 ALKNLTHLYLFGTKVTGVGLKELSGLKGLTTLYLNNTKVTDAGVKELSGLKGLTTLDL 319
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
LS + + D ++ +A + NL +LNL +T + AGV LAG L L L L+ T + D
Sbjct: 56 LSFTRVTDKGLKELAGL-KNLTHLNLFSTWVTDAGVKELAG-LKGLTTLDLNSTSVTDAG 113
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 427
+ ++ + +L + +S KG L L L L L+L T+V+DA
Sbjct: 114 MKELAALNNLTTLRLSG---KGVTDA---------GLKELAALKKLANLDLSHTKVTDAG 161
Query: 428 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 487
L L+ K L + L N +TD L +L++L KL +L + +T++GL + L
Sbjct: 162 LKELAALKGLTTIRLNNTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTC 221
Query: 488 LDLHG 492
L L G
Sbjct: 222 LGLLG 226
>gi|46446910|ref|YP_008275.1| hypothetical protein pc1276 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400551|emb|CAF24000.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 667
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 211/440 (47%), Gaps = 74/440 (16%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ L+ + + +A+L + L+ LN+ C +T + L L + L+ L+L++C
Sbjct: 284 NLKALHLQECDKLTDAGLAHLASLMALQHLNLNGCWELTDAGLAHLASLMALQHLNLAKC 343
Query: 126 VKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRS 183
K+TDAG+ HL S+ L+ L LS LT G+ L L L+ L+L +TD L
Sbjct: 344 HKITDAGLAHLTSLVALQHLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAGLAH 403
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECL 236
L L L++LDL + ++++ G A L L L+L+++ G+ L ++ +L+ L
Sbjct: 404 LTSLVALQHLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHL 463
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
NL++C K + AG
Sbjct: 464 NLNSCY---------------KFTDAG------------------------------LAH 478
Query: 297 LTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLE 354
LT + AL+HLDLS + D + +A + A L++L+LS + F++AG+ L L L+
Sbjct: 479 LTSLVALQHLDLSCCRNLTDAGLAHLAPLVA-LQHLDLSYSHHFTNAGLAHLTS-LVALQ 536
Query: 355 ILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
L LS + + D +++++ + +L+ +D+S+ + G E LT L L HL
Sbjct: 537 HLDLSCCRNLTDAGLAHLTSLVALQHLDLSSCKK---LTDAGLE-----HLTPLVALQHL 588
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VL 471
+ + + +++DA L L+ L HL L + LTD L L+ L L +L++ L
Sbjct: 589 DLSSCK--KLTDAGLAHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNLNWCDKL 646
Query: 472 TNSGLGSFK---PPRSLKLL 488
T++G+ FK P LK++
Sbjct: 647 TDAGVAHFKSSVAPLHLKII 666
>gi|149174587|ref|ZP_01853213.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
gi|148846697|gb|EDL61034.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
Length = 540
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 42/397 (10%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
A++ + LK + L + + G KH+ + LE L L T +T + + +L+NL L
Sbjct: 104 AISQLKNLKSIHL-LITTIEEGGRKHITGLQNLELLSLRGTTITDSDLKYVGALKNLQKL 162
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
+L ++D L L+ L++L L+L G+Q L TG+ L +
Sbjct: 163 NLNNTAISDAGLAHLRGLSELRVLELEGTQ-------------------LDGTGLVYLKH 203
Query: 230 ISSLECLNLSNCTIDSIL--EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
++ LE L+L N + + +G P +I AG I + + + DV
Sbjct: 204 LNHLEELDLDNYNNNFVGWNDGESENEPRPQIRDAGLKHIGKLKHLKKLSLFGAEISDVG 263
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
L +K LE L+ + I D V + + NL +L L +R S AG+ LA
Sbjct: 264 ------LAHLQDLKKLESLEFARENISDKGVAHLKGL-LNLTSLRLDGSRVSDAGLVHLA 316
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFI-----QQVGA---- 396
L L+ L L T I D + ++ + SLK +D+S+T + G I Q + +
Sbjct: 317 -KLQKLQSLDLGNTSISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLESLYLR 375
Query: 397 ETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
T+L + L++L+NL+ L+ L++ ++++D L ++ L L L +TD L L
Sbjct: 376 STNLSGVGLSSLKNLSMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITDQGLVHL 435
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
S L+ L L +++ ++++GL LK+LDL G
Sbjct: 436 SGLTNLKKLDLQETSISDAGLVHLSHLAGLKVLDLEG 472
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 154/330 (46%), Gaps = 55/330 (16%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+++D G+ HL + LE L + ++ G+A L L NL+ L L G V+D L L
Sbjct: 257 AEISDVGLAHLQDLKKLESLEFARENISDKGVAHLKGLLNLTSLRLDGSRVSDAGLVHLA 316
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
L KL+ LDL + +S+ TG+ L ++SL+ L+LS+ +
Sbjct: 317 KLQKLQSLDLGNTSISD-------------------TGLIHLQELTSLKSLDLSDTAVS- 356
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
++ L+++ + LY+ ++ LS + +S+ L + L++
Sbjct: 357 ----DDGLIHLSRL---------QNLESLYLRSTNLSGVGLSS--------LKNLSMLQY 395
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LD+ S + D + VA +G+ L +L L T + G+ L+G L NL+ L L T I D
Sbjct: 396 LDMGYSKMNDQGLIAVAELGS-LDSLGLFATPITDQGLVHLSG-LTNLKKLDLQETSISD 453
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
+ ++S + LK +D+ T I TD L LQ LN LE+L L++T VSD
Sbjct: 454 AGLVHLSHLAGLKVLDLEGTRI----------TD--AGLIHLQGLNELEQLELDKTAVSD 501
Query: 426 ATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
A L L +L L +T+ ++ L
Sbjct: 502 AGLKHLKGLTKLQFLQYEETQITEAGINDL 531
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 37/294 (12%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++E EN D + +A+L L SL + D RV+ + L L + L+ LDL
Sbjct: 274 ESLEFARENISD-KGVAHLKGLLNLTSLRL-DGSRVSDAGLVHLAKLQKLQSLDLGNT-S 330
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
++D G+ HL +++L+ L LS+T ++ DG+ LS LQNL L L ++ + L SL+ L
Sbjct: 331 ISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLESLYLRSTNLSGVGLSSLKNL 390
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 242
+ L+YLD+ S+++++G + L L L T G+ L +++L+ L+L +
Sbjct: 391 SMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITDQGLVHLSGLTNLKKLDLQETS 450
Query: 243 IDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQ 299
I + A L +S LAG L LD+ + ++ L
Sbjct: 451 I--------SDAGLVHLSHLAG-----------------LKVLDLEGTRITDAGLIHLQG 485
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
+ LE L+L + + D ++ + + L+ L T+ + AG+ L LP+L
Sbjct: 486 LNELEQLELDKTAVSDAGLKHLKGL-TKLQFLQYEETQITEAGINDLRQSLPDL 538
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N E++ LR N + ++ L L+ L++ ++ L A+ + L L L
Sbjct: 367 QNLESLYLRSTN-LSGVGLSSLKNLSMLQYLDMG-YSKMNDQGLIAVAELGSLDSLGLF- 423
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+TD G+ HL ++ L+KL L ET ++ G+ LS L L VLDL G +TD L L
Sbjct: 424 ATPITDQGLVHLSGLTNLKKLDLQETSISDAGLVHLSHLAGLKVLDLEGTRITDAGLIHL 483
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
Q L +LE L+L + VS+ G LK +L FL T +T+
Sbjct: 484 QGLNELEQLELDKTAVSDAGLKHLKGLTKLQFLQYEETQITE 525
>gi|46447588|ref|YP_008953.1| hypothetical protein pc1954 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401229|emb|CAF24678.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 704
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 220/497 (44%), Gaps = 84/497 (16%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L ++ + +A+L L+ L++ C +T L LT +T L+ L+LS C
Sbjct: 220 NLKVLHLNACQAITDDGLAHLTPLTGLQHLDIRVCEYLTDDGLAYLTSLTGLQHLNLSGC 279
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+TD G+ HL ++ L+ L L LTA G+A L L+ L LDL +T++ L
Sbjct: 280 YHLTDTGLAHLTPLTGLQHLDLRICEYLTATGLAHLKPLKALQHLDLSYCKNLTNVGLSH 339
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L LT L++LDL + Q+++ G L L L+L+ G+ L +++L+CL
Sbjct: 340 LAPLTALQHLDLSYCWQLADAGLVYLTPLTGLQHLDLSGYHKLTDAGLAHLTPLTALQCL 399
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
+LS C EN L + LA + + L+ + N +
Sbjct: 400 DLSYC---------EN---LTDVGLAHLMPLKALQH--------LNLRNCRNLTDDGLAH 439
Query: 297 LTQMKALEHLDLS-------------SSMIGDDSVEMVAC-----VG-------ANLRNL 331
L + AL+HLDLS + + G +++ C VG L++L
Sbjct: 440 LAPLTALQHLDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCENLTDVGLAHLIPLKALQHL 499
Query: 332 NLSNTR-FSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKG 389
NL N R + G+ LA L L+ L LS + D +++++ + +L+ + D+K
Sbjct: 500 NLRNCRNLTDDGLVHLAP-LTALQHLDLSDCNNLTDAGLAHLTPLTALQHL-----DLKY 553
Query: 390 FIQQVGAETDLVLSLTALQNLN-------------HLERLNLEQ-------TQVSDATLF 429
I GA + LT LQ L+ HL+ L Q ++D L
Sbjct: 554 CINLTGAGLAHLAFLTGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGLSYCENLTDDGLA 613
Query: 430 PLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKL 487
L + L HL+L +LTD L L SL+ L +L +R LT GL + +L+
Sbjct: 614 HLRSLTALQHLALIHYKNLTDAGLVHLRSLTSLQHLDLRYCQNLTGDGLAHLRTLTALQY 673
Query: 488 LDLHGGWLLTEDAILQF 504
L L LT+D + +F
Sbjct: 674 LALTQYKNLTDDGLARF 690
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 38/201 (18%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LR ++ + + +L L+ L+++DC +T + L LT +T L+ LDL C+
Sbjct: 497 QHLNLRNCRNLTDDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQHLDLKYCIN 556
Query: 128 VTDAGMKHLLSISTLEKLWLS------ETG--------------------LTADGIAL-- 159
+T AG+ HL ++ L+ L LS + G LT DG+A
Sbjct: 557 LTGAGLAHLAFLTGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGLSYCENLTDDGLAHLR 616
Query: 160 -LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL 217
L++LQ+L+++ L TD L L+ LT L++LDL + ++ G A L+ L +L
Sbjct: 617 SLTALQHLALIHYKNL--TDAGLVHLRSLTSLQHLDLRYCQNLTGDGLAHLRTLTALQYL 674
Query: 218 ------NLAWTGVTKLPNISS 232
NL G+ + ++S
Sbjct: 675 ALTQYKNLTDDGLARFKTLAS 695
>gi|226534342|gb|ACO71447.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534344|gb|ACO71448.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534348|gb|ACO71450.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534352|gb|ACO71452.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534354|gb|ACO71453.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534356|gb|ACO71454.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534358|gb|ACO71455.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534360|gb|ACO71456.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534364|gb|ACO71458.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534366|gb|ACO71459.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LTKLEYLD+WGS V+N GA + F LSFLNL+WT VT+ PNI LECL+++ C I SI
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSFLNLSWTSVTQTPNIPHLECLHMNKCDIVSI 61
Query: 247 LEGNENK-APLAKISLAGTTFINEREAF 273
+ + + A L K+ L+G TF E E+F
Sbjct: 62 SKTHSSALASLKKLVLSGATFSAETESF 89
>gi|8927653|gb|AAF82144.1|AC034256_8 Contains similarity to F-box protein FBL2 from Homo sapiens
gb|AF176518 and contains multiple Leucine Rich PF|00560
repeats. ESTs gb|Z34572, gb|Z34571, gb|AI100681,
gb|AI100675, gb|AA395320, gb|AI100674, gb|AA651378,
gb|AA007067, gb|T46145, gb|T22090, gb|AI995016,
gb|H36884, gb|AI995066, gb|H37061, gb|T43537 come from
this gene [Arabidopsis thaliana]
Length = 568
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 221/476 (46%), Gaps = 59/476 (12%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
L+ LC+ + E + ++ + LP ++ + L+ + + LE F+ A
Sbjct: 62 LMELCVR---KIQEDIDRYTK----FSDLPRDISQQIFDELVYSQRLTLKSLEAFRDCAI 114
Query: 69 AIELRGEN-SVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
GE V+ +WM + + L S++ + +T S L +L G T L+ L+ + C
Sbjct: 115 QDLYLGEYPGVNDDWMDVISSQSTSLLSVDFSG-SDITDSGLVSLKGCTNLESLNFNFCD 173
Query: 127 KVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
++++ G+ HL +S L L + +TA G+ LS+L NL LDL P D L L+
Sbjct: 174 QISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEKCPGIDGGLVHLR 233
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 244
LTKLE L++ W + +++ M P +G+ KL ++ C +++ +D
Sbjct: 234 ALTKLESLNIKWCNCITDA-----DMEP--------LSGLNKLNLLNLEGCRHVTAACLD 280
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
++ + P A LAG ++N L+ + S+S +F L +K L
Sbjct: 281 TLT--GLYRHPHA---LAGLMYLN------------LNRCNFSDSGCEKFSDLINLKIL- 322
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
+L + I + + + + L +LNL + R G+ L+G L L+ L LS T++
Sbjct: 323 --NLGMNNITNSCLVHLKGL-TKLESLNLDSCRIGDEGLVHLSGMLE-LKSLELSDTEVG 378
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
+ ++S + +L+ I++S T + G L L L L LNL+ V+
Sbjct: 379 SNGLRHLSGLSNLESINLSFT----VVTDSG--------LRKLSGLTSLRTLNLDARHVT 426
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
DA L L++ L HL L A +TD + L +L KL +L I LT++G+ + K
Sbjct: 427 DAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIK 482
>gi|301098037|ref|XP_002898112.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105473|gb|EEY63525.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 45/422 (10%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
+G + E + L L +LN++ C V + +L + LK L L C ++TD
Sbjct: 233 FQGCTGLSKETIEMLKLSTKLTTLNLSGCANVDDKCVKSLRQLEHLKSLQLVGCRRLTDK 292
Query: 132 GMKHLLSISTLEKLWLSET-GLTADGI-ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
G+K L ++ LEKL L LT D + S L LD+ +++ ++ + +
Sbjct: 293 GVKRLFKLTKLEKLRLGRCRKLTDDAFGGFVDSFPKLRELDVSNCRLSERAMQHIGQVKS 352
Query: 190 LEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTG-VTKLPN-ISSLECLNLSNCTIDSI 246
LE L + G Q +S+ G A L L + + G + +P + LE L
Sbjct: 353 LEVLVIRGCQDISDVGMASLAELTNLKYFDARHCGKIHSIPTEWTQLEVL---------- 402
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALE 304
L G T E +A + + L L++ + + F F++++K LE
Sbjct: 403 --------------LLGYTAFAESDAAVLQYLTKLQELELRKCRIMKRGFQFISRLKHLE 448
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
L+++ + + D + + NL+ LN+SNT S +G L L L IL L + I
Sbjct: 449 RLEVAETALTDSRLLEICNNAINLKALNVSNTEISDSGTTGLT-KLKELRILGLDTSGIT 507
Query: 365 DYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTA----------LQNLNH 412
+ A++ +S +P L+ +D+ +I G + + L++ + L
Sbjct: 508 NRALANLSFLPQLERLDLFGANITDNGLMHLIPLHKLQELAICGGNIGDRGVGLISKLTS 567
Query: 413 LERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 471
L LNL Q + + +LF L + L L+L N ++ +SL LS L +L +LS+ L
Sbjct: 568 LTSLNLSQNRNIRTKSLFYLRSLTSLRCLNLSNTGISALSLRHLSPLKELQSLSVYGCSL 627
Query: 472 TN 473
+
Sbjct: 628 SQ 629
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 165/390 (42%), Gaps = 50/390 (12%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE----TGLTADGIALLSSLQNLSVLDLG 172
+K +D+S C+ + G + ++ L +L ++ TGL+ + I +L L+ L+L
Sbjct: 200 VKSIDVSGCIHLQQLGSEWGRHVNRLPELLVASFQGCTGLSKETIEMLKLSTKLTTLNLS 259
Query: 173 GLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
G V D ++SL+ L L+ L L G + L GV +L ++
Sbjct: 260 GCANVDDKCVKSLRQLEHLKSLQLVGCR------------------RLTDKGVKRLFKLT 301
Query: 232 SLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL----- 284
LE L L C D G + P + ++ER + L L
Sbjct: 302 KLEKLRLGRCRKLTDDAFGGFVDSFPKLRELDVSNCRLSERAMQHIGQVKSLEVLVIRGC 361
Query: 285 -DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
D+S+ ++ LT +K + + G + + L L L T F+ +
Sbjct: 362 QDISDVGMASLAELTNLKYFD-----ARHCG--KIHSIPTEWTQLEVLLLGYTAFAESDA 414
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
+L +L L+ L L +I ++S + L+ ++++ T A TD L
Sbjct: 415 AVLQ-YLTKLQELELRKCRIMKRGFQFISRLKHLERLEVAET----------ALTDSRL- 462
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L N +L+ LN+ T++SD+ L+ KEL L L + +T+ +L LS L +L
Sbjct: 463 LEICNNAINLKALNVSNTEISDSGTTGLTKLKELRILGLDTSGITNRALANLSFLPQLER 522
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
L + A +T++GL P L+ L + GG
Sbjct: 523 LDLFGANITDNGLMHLIPLHKLQELAICGG 552
>gi|297844484|ref|XP_002890123.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335965|gb|EFH66382.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 220/497 (44%), Gaps = 84/497 (16%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
L+ LCI +Q+ + LP ++ + L+ + + LE F+ A
Sbjct: 55 LMELCIRK-------IQEVIDRYTKFSDLPRDISQQIFDELVYSQRLTLKSLEAFRDCAI 107
Query: 69 AIELRGEN-SVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
GE V+ +WM + + L S++ + +T S L +L G T L+ L+ + C
Sbjct: 108 QDLCLGEYPGVNDDWMDVISSQSTSLLSVDFSG-SDITDSGLVSLKGCTNLESLNFNFCD 166
Query: 127 KVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
++++ G++HL +S L L + +TA G+ LS+L N+ LDL P L L+
Sbjct: 167 QISNRGLEHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNMKKLDLEKCPGIHGGLVHLR 226
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE---------- 234
LTKLE L++ W + +++ L L L + + +T + IS L+
Sbjct: 227 GLTKLESLNIKWCNCITDADMEPLSELTNLRSLQICCSRITDI-GISYLKGLNKLNLLNL 285
Query: 235 --CLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN-EREAF------LYIETSLLSFLD 285
C +++ +D++ +L G F+N R F + + L L+
Sbjct: 286 EGCRHVTAACLDTL------------TALTGLMFLNLNRCNFSDSGCEKFSDLINLKILN 333
Query: 286 VSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
+ +S++ C L + LE L+L S IGD+ + ++ + L++L LS+T S G+
Sbjct: 334 LGMNSITNSCLVHLRGLTKLESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGSNGL 392
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
L+G L NLE ++LS T + D + +S + SL+
Sbjct: 393 RHLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLR------------------------- 426
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
LNL+ V+DA L L++ L HL L A +TD + L +L KL +
Sbjct: 427 -----------TLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQS 475
Query: 464 LSIRDAVLTNSGLGSFK 480
L I LT++G+ + K
Sbjct: 476 LEICGGGLTDTGVKNIK 492
>gi|442319589|ref|YP_007359610.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
gi|441487231|gb|AGC43926.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
Length = 600
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 183/417 (43%), Gaps = 69/417 (16%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L AL T + L L +VTDAG+ HL + L + L ET ++ G+A L L L
Sbjct: 134 LGALRDFTAWEALHLD-GTRVTDAGLPHLSGLRRLSVVRLEETAISDKGLAFLEGLTTLR 192
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDL-----------W------------GSQVSNRG 204
+ L G V+ LR L +LE+LDL W G+QV++ G
Sbjct: 193 RVGLAGTSVSAQGLRFLSAQAELEWLDLSDTSTDDRVLAWVSGAHLHTLILSGTQVTDAG 252
Query: 205 AAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
A L+ P L++L LA TG+T + + +LE L+L ++
Sbjct: 253 LARLRDMPHLTWLGLARTGLTDGGLAPIGALRALEALHLGET----------------QV 296
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
+ AG + E ++ +E +L+ + L LT+++ L HLD + + D ++
Sbjct: 297 TDAGLLHLAESKS---LEALVLTKTRLHGPGLQHLAGLTRLELL-HLD--DTRLDDAAMR 350
Query: 320 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 379
+ + A LR L LS T + AG+ L L LE L +SG + A++ + L
Sbjct: 351 HLRGLVA-LRELELSRTLITGAGLASLDA-LSALERLGVSGLAVTADALAVLQKTERLTR 408
Query: 380 IDISNTDIKGFIQQVGAETDLVLSLTALQNL-NHLERLNLEQTQVSDATLFPLSTFKELI 438
+D+S+T VG E AL ++ + L L+L +T +D L L L
Sbjct: 409 LDLSHT-------PVGPE--------ALAHVPSGLRELDLSRTAFNDEWLPSLRRLSRLQ 453
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
L LTD+ L QL L++L L + ++ SGL + L LDL WL
Sbjct: 454 SLRAERTLLTDLGLGQLGELTELAALHLSGTLVNGSGLAHLQRLPHLAHLDLGATWL 510
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 198/466 (42%), Gaps = 69/466 (14%)
Query: 57 PSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVA--DCRRVTSSALWALTGM 114
P+LL + LR S + A+LGA R + D RVT + L L+G+
Sbjct: 107 PTLLAALVRGTSLVTLRASGSSLGD--AHLGALRDFTAWEALHLDGTRVTDAGLPHLSGL 164
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
L + L ++D G+ L ++TL ++ L+ T ++A G+ LS+ L LDL
Sbjct: 165 RRLSVVRLEETA-ISDKGLAFLEGLTTLRRVGLAGTSVSAQGLRFLSAQAELEWLDLSDT 223
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPN 229
D VL + L L L G+QV++ G A L+ P L++L LA TG+T +
Sbjct: 224 STDDRVLAWVSG-AHLHTLILSGTQVTDAGLARLRDMPHLTWLGLARTGLTDGGLAPIGA 282
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+ +LE L+L +++ AG + E ++ +E +L+ +
Sbjct: 283 LRALEALHLGET----------------QVTDAGLLHLAESKS---LEALVLTKTRLHGP 323
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
L LT+++ L HLD + + D ++ + + A LR L LS T + AG+ L
Sbjct: 324 GLQHLAGLTRLELL-HLD--DTRLDDAAMRHLRGLVA-LRELELSRTLITGAGLASLDA- 378
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI---------KGF---------- 390
L LE L +SG + A++ + L +D+S+T + G
Sbjct: 379 LSALERLGVSGLAVTADALAVLQKTERLTRLDLSHTPVGPEALAHVPSGLRELDLSRTAF 438
Query: 391 -------------IQQVGAETDLV--LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 435
+Q + AE L+ L L L L L L+L T V+ + L L
Sbjct: 439 NDEWLPSLRRLSRLQSLRAERTLLTDLGLGQLGELTELAALHLSGTLVNGSGLAHLQRLP 498
Query: 436 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 481
L HL L L L L++LT LS+ L ++ LG P
Sbjct: 499 HLAHLDLGATWLEAHYTPALQGLTRLTWLSLARGRLGDAALGHLPP 544
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 180/397 (45%), Gaps = 22/397 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
SV A+ + +L A L L+++D T + A L L LS +VTDAG+
Sbjct: 199 TSVSAQGLRFLSAQAELEWLDLSDTS--TDDRVLAWVSGAHLHTLILS-GTQVTDAGLAR 255
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L + L L L+ TGLT G+A + +L+ L L LG VTD L L LE L L
Sbjct: 256 LRDMPHLTWLGLARTGLTDGGLAPIGALRALEALHLGETQVTDAGLLHLAESKSLEALVL 315
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSI-LEG 249
+++ G L RL L+L T + L + +L L LS I L
Sbjct: 316 TKTRLHGPGLQHLAGLTRLELLHLDDTRLDDAAMRHLRGLVALRELELSRTLITGAGLAS 375
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
+ + L ++ ++G + A L +T L+ LD+S++ + L LDLS
Sbjct: 376 LDALSALERLGVSGLAVTADALAVLQ-KTERLTRLDLSHTPVGPEALAHVPSGLRELDLS 434
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ D+ + + + + L++L T + G+G L G L L L LSGT ++ ++
Sbjct: 435 RTAFNDEWLPSLRRL-SRLQSLRAERTLLTDLGLGQL-GELTELAALHLSGTLVNGSGLA 492
Query: 370 YMSMMPSLKFIDISNTDIKGF----IQQVGAETDLVLSLTALQN--LNHL----ERLNLE 419
++ +P L +D+ T ++ +Q + T L L+ L + L HL L L
Sbjct: 493 HLQRLPHLAHLDLGATWLEAHYTPALQGLTRLTWLSLARGRLGDAALGHLPPGLHTLYLT 552
Query: 420 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 456
+T V+DA L L + L L LR ++TD + LS
Sbjct: 553 RTGVTDAGLDSLRSLPHLRQLDLRGTAVTDAARDALS 589
>gi|255553315|ref|XP_002517700.1| F-box/LRR-repeat protein, putative [Ricinus communis]
gi|223543332|gb|EEF44864.1| F-box/LRR-repeat protein, putative [Ricinus communis]
Length = 529
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 231/520 (44%), Gaps = 99/520 (19%)
Query: 4 ERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF 63
+R L+ LCI+ + E + K+ + LP ++ + L+ + + + +E F
Sbjct: 51 QRCPSLMELCIQ---KIREDIDKYS----TFSMLPRDISQQIFNELVYSQRLNDATIEAF 103
Query: 64 K-------HNAE--------------------AIELRGENSVDAEWMAYLGAFRYLRSLN 96
+ H E +++L G + D+ +AYL L++LN
Sbjct: 104 RDCALQDLHLGECPGVNDSWMDVISSQGISLLSVDLSGSDVTDS-GLAYLKDCTNLQALN 162
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG 156
C +++ L ++ + L+ L++ C +TDA MK+L + L+ L +S + +T G
Sbjct: 163 FNYCDQISDPGLSNISDLLKLESLNIKWCNCITDADMKYLSGLVKLKGLQISCSKVTDVG 222
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
I+ L L L++L+L G PVT L SL L L YL+L +S+ G RL
Sbjct: 223 ISYLKGLHKLNLLNLEGCPVTVACLDSLSALAALLYLNLNRCHLSDDGCEAFSKLGRLKV 282
Query: 217 LNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
LNL + ++ L +++LE LNL +C ID EG LA ++
Sbjct: 283 LNLGFNDISDACLVHLKGLTNLESLNLDSCRIDD--EG------LANLT----------- 323
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
+++ +LS +V +S L LT LE ++LS +MI D + ++ ++L++L
Sbjct: 324 GLRHLKCLVLSDTEVGSSGLRHLSGLTN---LESINLSFTMITDGGIRKLS-GLSSLKSL 379
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL + + +G+ L +L L L L G +I D Y+ +L+ ++I
Sbjct: 380 NLDARQITDSGLAALT-NLTGLTHLDLFGARITDSGTHYLRNFKNLQSLEICG------- 431
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
G TD ++N+ + +N +LTD S
Sbjct: 432 ---GGLTD-----AGIRNIK--------------------DLSSLSLLNLSQNCNLTDKS 463
Query: 452 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
L +S L+ L +L++ ++ +T++GL KP ++LK L L
Sbjct: 464 LELISGLTGLVSLNVSNSRITSAGLQHLKPLKNLKSLTLE 503
>gi|320163275|gb|EFW40174.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 989
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 168/347 (48%), Gaps = 31/347 (8%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT+ L A+ + L+EL + VT G+ H+ ++ L L L T L + +S
Sbjct: 500 VTNELLCAMRFFSLLQELSIRSAEFVTHVGINHIAGLNNLRVLDLGITRLNDQAMPTISQ 559
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVL-TKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
L L+VL+L +TD L L L L++LD+ S+++ RG A+L FP+L L +A
Sbjct: 560 LP-LTVLNLERTLITDSGLARLAPLGATLQHLDISDCSKLTERGLALLAAFPQLRTLAIA 618
Query: 221 W---TGVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
T V +L N L LNL+ I + L+ L +SLA T + +L
Sbjct: 619 GLPLTDVGRLSNFPELRSLNLARTAIVEGKLDSIRRYIHLVHLSLANTKLGDNDVRYLQY 678
Query: 277 ETSLLSF-----LDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRN 330
T+L S + NSS++ L L LDL+ + + D+ ++ ++ + L +
Sbjct: 679 LTNLSSLKLPSRFQIGNSSIAHISKL----PLTELDLTDYIHVTDEGIQFISALAPTLVS 734
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L+LSNT+ +SAG+ +A LE+L L T + D I ++ + L+ + +S T +
Sbjct: 735 LSLSNTKLTSAGIPAVAA-CTKLEVLQLDRTPLKDDVIPLLAPLTRLRTLSLSRTHLTSA 793
Query: 391 IQQVGAETD------LVLSLTALQN-------LNHLERLNLEQTQVS 424
+ + GA + L LS T ++N L L LNL+ T+V+
Sbjct: 794 VVRSGAFSPFTRLESLNLSWTFIENQGLDQLRLPMLTTLNLDSTRVT 840
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 92 LRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L++ D VT + ++ + L L LS K+T AG+ + + + LE L L T
Sbjct: 706 LTELDLTDYIHVTDEGIQFISALAPTLVSLSLSNT-KLTSAGIPAVAACTKLEVLQLDRT 764
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS--LQVLTKLEYLDLWGSQVSNRGAAVL 208
L D I LL+ L L L L +T V+RS T+LE L+L + + N+G L
Sbjct: 765 PLKDDVIPLLAPLTRLRTLSLSRTHLTSAVVRSGAFSPFTRLESLNLSWTFIENQGLDQL 824
Query: 209 KMFPRLSFLNLAWTGVT 225
++ P L+ LNL T VT
Sbjct: 825 RL-PMLTTLNLDSTRVT 840
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 40/162 (24%)
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQID 364
L+L ++I D + +A +GA L++L++S+ ++ + G+ +LA P L L+++G
Sbjct: 565 LNLERTLITDSGLARLAPLGATLQHLDISDCSKLTERGLALLAA-FPQLRTLAIAG---- 619
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
L D+ L N L LNL +T +
Sbjct: 620 ------------LPLTDVGR----------------------LSNFPELRSLNLARTAIV 645
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+ L + + L+HLSL N L D + L L+ L++L +
Sbjct: 646 EGKLDSIRRYIHLVHLSLANTKLGDNDVRYLQYLTNLSSLKL 687
>gi|118483021|gb|ABK93422.1| unknown [Populus trichocarpa]
Length = 107
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 67/125 (53%), Gaps = 27/125 (21%)
Query: 487 LLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQK 546
+LDL G WLLTEDAIL FCK HP IE+ HE V+ SDQ + +P RT LR V QK
Sbjct: 1 MLDLRGCWLLTEDAILSFCKRHPLIELRHE-HVVSTSDQTARHRLTPPRTFLRPPQVNQK 59
Query: 547 QDPMPMSHSFLGGVLLFSMRYSFKCIHLTFFVCFSKTDQRLKYSREELLELQYSSLSLAR 606
Q+ + +S F+ DQRLKY+REELL LQ+ S SL
Sbjct: 60 QEKLIVSQYFI--------------------------DQRLKYTREELLALQFQSSSLGS 93
Query: 607 PDDSS 611
P D S
Sbjct: 94 PFDKS 98
>gi|290973802|ref|XP_002669636.1| predicted protein [Naegleria gruberi]
gi|284083186|gb|EFC36892.1| predicted protein [Naegleria gruberi]
Length = 548
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 167/403 (41%), Gaps = 68/403 (16%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + ++ + +L +L++ D + + L+ +T L +L+L ++ DAG
Sbjct: 147 GHNEIGNDGAKHVSSLTHLTALDLFD-NGIGPNGAQRLSSLTNLTQLNLGN-NEIGDAGA 204
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+H+ S++ L +L L T L A+G+ L L+ L+ LDL G + + +L L L+ L
Sbjct: 205 EHISSLTNLTQLNLRITKLGANGVKSLRGLKKLTELDLSGNQIGYEGVNNLSELKNLKKL 264
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE-CLNLSNCTIDSILEGNEN 252
+L ++++ GA L L+ L+L +++L N++ + CLN
Sbjct: 265 NLGNNRITGDGAERLCGLENLTELDLRAEHLSQLKNLTQINLCLN--------------- 309
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
+ + R C LT L L+L S++
Sbjct: 310 --------------------------------QIGPNGAERLCELTN---LTQLNLRSNL 334
Query: 313 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
IG E + C NL L+L R G L+ L L L LSG QI +S
Sbjct: 335 IGAIKAESL-CKLENLTQLDLGYNRIEDDGAQRLS-KLKKLTQLDLSGNQIGSIGAQSLS 392
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
+ +L +D++ I+ Q L L L RL L ++ D LS
Sbjct: 393 ELTNLTHLDLNGNGIEDGAQH-------------LSKLKKLTRLGLNDNRIGDDGAKYLS 439
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
+L HLSL N + D LS L +T LS+ D + +G
Sbjct: 440 ELNKLTHLSLDNNGIGDTGAECLSKLKNITYLSLDDNEIETAG 482
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
G ++ L NL L L +I + +S + +LK +++ + +I GA+ V S
Sbjct: 108 GTISTKLVNLTQLDLCRNKIKPTVVKGLSSLTNLKKLNLGHNEIG----NDGAKH--VSS 161
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
LT HL L+L + LS+ L L+L N + D +SSL+ LT
Sbjct: 162 LT------HLTALDLFDNGIGPNGAQRLSSLTNLTQLNLGNNEIGDAGAEHISSLTNLTQ 215
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
L++R L +G+ S + + L LDL G +
Sbjct: 216 LNLRITKLGANGVKSLRGLKKLTELDLSGNQI 247
>gi|226505324|ref|NP_001147302.1| regulatory subunit [Zea mays]
gi|195609698|gb|ACG26679.1| regulatory subunit [Zea mays]
gi|413937767|gb|AFW72318.1| regulatory subunit isoform 1 [Zea mays]
gi|413937768|gb|AFW72319.1| regulatory subunit isoform 2 [Zea mays]
Length = 582
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 190/403 (47%), Gaps = 43/403 (10%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N+V AE M L +L++ C ++ L L +T L+ L++ C + D+ +K+
Sbjct: 196 NAVTAEGMRAFANLVNLLNLDLEGCLKI-HGGLIHLKDLTKLESLNMRYCNYIADSDIKY 254
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ L+ L LS +T G++ + LQ L+ L+L G PVT L ++ L+ L L+L
Sbjct: 255 LTDLTNLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEGCPVTAACLEAISGLSSLVLLNL 314
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGN 250
+ + G + RL LNL + +T L + SLE LNL +C I
Sbjct: 315 NRCGIYDDGCENFEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSCKI------- 367
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
G ++ + + +++ LS +V N+ L L+ ++ L+ ++LS
Sbjct: 368 ------------GDDGLSHLKGLVLLQSLELSDTEVGNNGLQH---LSGLRNLQSINLSF 412
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+++ D V+ ++ + + L+++NL N + + G+ L L L L L G I D +
Sbjct: 413 TLVTDIGVKKISVLNS-LKSVNLDNRQITDVGLAALI-SLTRLTHLDLFGACITDNGTNC 470
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLF 429
+L +++ GF+ G + +++L L LNL Q ++D TL
Sbjct: 471 FRYFKNLVSLEVCG----GFVTDAGVKN--------IKDLKALTLLNLSQNANLTDKTLE 518
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
+S LI+L++ N+ +++ L L+ L L +LS+ +T
Sbjct: 519 LISGLTALINLNVSNSRVSNAGLKHLNDLHNLRSLSLDSTRVT 561
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 244/521 (46%), Gaps = 50/521 (9%)
Query: 2 ERERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLE 61
E R L+ LC+ CQ + ++ + LP L+ + L+ + + L+
Sbjct: 53 EPGRCPSLMELCVARVCQD---IDRYS----TFAMLPRDLSQQIFNELVNSNRLTEASLQ 105
Query: 62 VFKHNA-EAIELRGENSVDAEWMAYLGAFRY-LRSLNVADCRRVTSSALWALTGMTCLKE 119
VF+ A + I L V WM + + + L S++++ C V S + L + ++
Sbjct: 106 VFRDCALQDIGLGEYPGVKDAWMEVVASQKQSLLSVDIS-CSEVADSGIDLLRDCSSMQS 164
Query: 120 LDLSRCVKVTDAGMK-HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
L + C +++++G+ + + +TA+G+ ++L NL LDL G
Sbjct: 165 LACNYCDQISESGLGVLSGLSNLSSLSFKRSNAVTAEGMRAFANLVNLLNLDLEGCLKIH 224
Query: 179 LVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 232
L L+ LTKLE L++ + + +++ L L L L+ GV+ + +
Sbjct: 225 GGLIHLKDLTKLESLNMRYCNYIADSDIKYLTDLTNLKDLQLSCCKITDLGVSYIRGLQK 284
Query: 233 LECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINER-EAFLYIETSLLSFLDVSNSS 290
L LNL C + + LE + L ++L ++ E F ++ L L++ +
Sbjct: 285 LTHLNLEGCPVTAACLEAISGLSSLVLLNLNRCGIYDDGCENFEGLKR--LKVLNLGFNY 342
Query: 291 LSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
++ C L ++ +LE L+L S IGDD + + + L++L LS+T + G+ L+G
Sbjct: 343 ITDACLVHLKELISLESLNLDSCKIGDDGLSHLKGL-VLLQSLELSDTEVGNNGLQHLSG 401
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
L NL+ ++LS T + D + +S++ SLK +++ N I VG ++SLT L
Sbjct: 402 -LRNLQSINLSFTLVTDIGVKKISVLNSLKSVNLDNRQIT----DVGLAA--LISLTRLT 454
Query: 409 NLN------------------HLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTD 449
+L+ +L L + V+DA + + K L L+L +NA+LTD
Sbjct: 455 HLDLFGACITDNGTNCFRYFKNLVSLEVCGGFVTDAGVKNIKDLKALTLLNLSQNANLTD 514
Query: 450 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+L +S L+ L NL++ ++ ++N+GL +L+ L L
Sbjct: 515 KTLELISGLTALINLNVSNSRVSNAGLKHLNDLHNLRSLSL 555
>gi|46447129|ref|YP_008494.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400770|emb|CAF24219.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 559
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 174/367 (47%), Gaps = 62/367 (16%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ + EA+ + + L + L+ L++ C+ +T L LT +T
Sbjct: 216 FERIINHLSNEIEALNFSNNTYLTDAHFSALKDCKNLKVLHLVSCQAITDDRLAHLTPLT 275
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL 174
L+ L+LS+C K+TD G+ HL ++ L+ L LS LT G+A L+ L+ L L+L G
Sbjct: 276 ALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTPLKALQHLNLRGF 335
Query: 175 -PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-W-----TGVTK 226
+TD L L LT L+YLDL W +++ G A L L LNL+ W G+ +
Sbjct: 336 GKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGLAR 395
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
L +++L+ L+LS+C EN +
Sbjct: 396 LIFLTALQHLDLSDC---------EN---------------------------------L 413
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGI 345
+++ L R LT + AL+HL LS M D+ + L++LNLS + AG+
Sbjct: 414 TSAGLER---LTSLTALQHLGLSYCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGLVH 470
Query: 346 LAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 404
L L L+ L+L G + + D ++Y++ + +L+ +++S + + G T L SL
Sbjct: 471 LTP-LTALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRCK---HLTEAGL-THLA-SL 524
Query: 405 TALQNLN 411
TALQ+LN
Sbjct: 525 TALQHLN 531
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 16/284 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L ++ + +A+L L+ LN++ CR++T + L LT +T L+ LDLS C
Sbjct: 251 NLKVLHLVSCQAITDDRLAHLTPLTALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYC 310
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+TDAG+ HL + L+ L L G LT G+ L+ L L LDL +TD L
Sbjct: 311 KNLTDAGLAHLTPLKALQHLNLRGFGKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAH 370
Query: 184 LQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECL 236
L LT L++L+L G +++ G A L L L NL G+ +L ++++L+ L
Sbjct: 371 LTPLTGLQHLNLSGWYHLTDAGLARLIFLTALQHLDLSDCENLTSAGLERLTSLTALQHL 430
Query: 237 NLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS---NSSL 291
LS C D+ L L ++L+G + + + L L++ N +
Sbjct: 431 GLSYCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGLVHLTPLTALQHLNLGGCENLTD 490
Query: 292 SRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLS 334
+ +LT + AL+HL+LS + + + +A + A L++LNLS
Sbjct: 491 AGLAYLTPLTALQHLNLSRCKHLTEAGLTHLASLTA-LQHLNLS 533
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N DA +A+L L+ LN++ +T + L L +T L+ LDLS C +T AG++
Sbjct: 361 KNLTDA-GLAHLTPLTGLQHLNLSGWYHLTDAGLARLIFLTALQHLDLSDCENLTSAGLE 419
Query: 135 HLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEY 192
L S++ L+ L LS LT G+ L+ L L L+L G +TD L L LT L++
Sbjct: 420 RLTSLTALQHLGLSYCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGLVHLTPLTALQH 479
Query: 193 LDLWGSQ-VSNRGAAVLKMFPRLSFLNLA------WTGVTKLPNISSLECLNLSNC 241
L+L G + +++ G A L L LNL+ G+T L ++++L+ LNLS C
Sbjct: 480 LNLGGCENLTDAGLAYLTPLTALQHLNLSRCKHLTEAGLTHLASLTALQHLNLSYC 535
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRG-ENSVDAEWMAYLGAFRYLRSLNVA 98
HL S HL L+ + L +H + L G EN DA +AYL L+ LN++
Sbjct: 454 HLNLSGCFHLTDAGLVHLTPLTALQH----LNLGGCENLTDA-GLAYLTPLTALQHLNLS 508
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
C+ +T + L L +T L+ L+LS C +TDAG++
Sbjct: 509 RCKHLTEAGLTHLASLTALQHLNLSYCDNLTDAGLE 544
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLP 351
R LT + AL+HL+LS D+ + L++L+LS + + AG+ L L
Sbjct: 267 RLAHLTPLTALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTP-LK 325
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS---NTDIKGFIQQVGAETDLVLSLTAL 407
L+ L+L G ++ D + +++ + +L+++D+S N G LT L
Sbjct: 326 ALQHLNLRGFGKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAH-----------LTPL 374
Query: 408 QNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLS 465
L HL NL ++DA L L L HL L + +LT L +L+SL+ L +L
Sbjct: 375 TGLQHL---NLSGWYHLTDAGLARLIFLTALQHLDLSDCENLTSAGLERLTSLTALQHLG 431
Query: 466 IRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
+ + LT++GL P +L+ L+L G + LT+ ++ +
Sbjct: 432 LSYCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGLVHLTPL 474
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV-----EMVACVG 325
E F E SL+ ++ N + C L ++K + S+++ S ++ +
Sbjct: 167 ETFNSTEESLIGLKELLN--FAHRCQLNRLKNYLEFIVVSTLLNQTSQLAEFERIINHLS 224
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISN 384
+ LN SN + + NL++L L Q I D +++++ + +L+ +++S
Sbjct: 225 NEIEALNFSNNTYLTDAHFSALKDCKNLKVLHLVSCQAITDDRLAHLTPLTALQHLNLSK 284
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
+ +T LV LT L L HL+ + ++DA L L+ K L HL+LR
Sbjct: 285 C-------RKLTDTGLV-HLTPLTALQHLDLSYCKN--LTDAGLAHLTPLKALQHLNLRG 334
Query: 445 -ASLTDVSLHQLSSLSKLTNLSIR-DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
LTD L L+ L+ L L + LT++GL P L+ L+L G + LT+ +
Sbjct: 335 FGKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGL 393
>gi|46447554|ref|YP_008919.1| hypothetical protein pc1920 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401195|emb|CAF24644.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 517
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 135/267 (50%), Gaps = 21/267 (7%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKE 119
L+V K N + + L ++ + +A+L L+ L+++ CR++T L LT +T L+
Sbjct: 246 LKVCK-NLKVLHLEACQAITDDGLAHLTPLTALQHLDLSQCRKLTGIGLAHLTPLTALQH 304
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLPVTD 178
LDLS C +TDAG+ HL ++ L+ L LS+ LT G+ LS L L LDL +
Sbjct: 305 LDLSGCDNLTDAGLAHLAPLTALQHLNLSDCENLTDAGLVHLSPLIALQHLDLSYCWRLN 364
Query: 179 LV-LRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNI 230
L L+ LT L+YLDL +++ G A LK RL +LNL + G+ L +
Sbjct: 365 YAGLAHLKPLTALQYLDLSHCINLTDAGLAHLKPLMRLQYLNLRYCENLTDAGLAHLTPL 424
Query: 231 SSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS- 287
+L+ LNLS C D+ L L + L+ + + ++L +LD+S
Sbjct: 425 MALQHLNLSECYHLTDAGLTHLTPLTALQHLDLSHCRSLTDAGLAHLTSLTVLQYLDLSY 484
Query: 288 -----NSSLSRFCFLTQMKALEHLDLS 309
++ L+R LT + L+HLDLS
Sbjct: 485 CKNLTDAGLAR---LTPLTGLQHLDLS 508
>gi|70663921|emb|CAE02935.3| OSJNBa0014K14.7 [Oryza sativa Japonica Group]
Length = 557
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 183/408 (44%), Gaps = 43/408 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ + ++V AE L SL++ C ++ L L G+ L++L+L C
Sbjct: 185 NVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYC 243
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G VT L +
Sbjct: 244 NGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLEVIS 303
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSN 240
L L L+L V + G L+ +L LNL + +T L + +LECLNL +
Sbjct: 304 GLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLNLDS 363
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I G+E LA + + T E ++TS L F +
Sbjct: 364 CKI-----GDEG---LAHLKVFHKTLKAENHTISLMQTS-------ETKKLGTF----RH 404
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
++ E SS + S + + L +L+L R + AG L + NL+ L + G
Sbjct: 405 RSWEQWTSSSLWMVFLSSQGLT----GLTHLDLFGARITDAGTNCLK-YFKNLQSLEVCG 459
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
I D + + + +L +++S Q G TD L L + L L LN+
Sbjct: 460 GLITDAGVKNIKDLKALTLLNLS---------QNGNLTDKSLEL--ISRLTALVSLNVSN 508
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL-SIR 467
++VS++ L L + L LSL + +T + + +L L+ L NL S+R
Sbjct: 509 SRVSNSGLHHLKPLQNLRSLSLESCKVTAIEIKKL-QLAALPNLVSVR 555
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 184/430 (42%), Gaps = 64/430 (14%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +++ + + + L + SL+ C VT+ A M L LDL RC
Sbjct: 160 NLQSLSCNYCDQISEHGLKTLSGLSNVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERC 219
Query: 126 VKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
K+ G+ HL + LEKL L G+T + LS L NL L L ++DL + L
Sbjct: 220 PKI-HGGLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYL 278
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 244
+ L+KL +L+L G V+ AA L++ + ++SL LNLS C +
Sbjct: 279 RGLSKLAHLNLEGCAVT---AACLEV----------------ISGLASLVLLNLSRCGVY 319
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
EG E+ L K+ + F YI + L L ++ LE
Sbjct: 320 D--EGCEHLEGLVKLKVLNL-------GFNYITDACLVHL-------------KELINLE 357
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
L+L S IGD+ + + L+ N + + ++ L + +
Sbjct: 358 CLNLDSCKIGDEGLAHLKVFHKTLKAENHTISLMQTSETKKLG---------TFRHRSWE 408
Query: 365 DYAIS--YMSMMPSLKFIDISNTDIKGF-IQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+ S +M + S +++ D+ G I G L+ +L+ L +
Sbjct: 409 QWTSSSLWMVFLSSQGLTGLTHLDLFGARITDAGT--------NCLKYFKNLQSLEVCGG 460
Query: 422 QVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
++DA + + K L L+L +N +LTD SL +S L+ L +L++ ++ ++NSGL K
Sbjct: 461 LITDAGVKNIKDLKALTLLNLSQNGNLTDKSLELISRLTALVSLNVSNSRVSNSGLHHLK 520
Query: 481 PPRSLKLLDL 490
P ++L+ L L
Sbjct: 521 PLQNLRSLSL 530
>gi|348503268|ref|XP_003439187.1| PREDICTED: hypothetical protein LOC100705990 [Oreochromis
niloticus]
Length = 894
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 208/457 (45%), Gaps = 71/457 (15%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYLGAFRY 91
SL L LA+ LL H+ RL+ P LE+F + L E + L AF
Sbjct: 467 SLAGLTPELAELLLNHMSHERLLHPRTLELFFGCPIQKFVLNSYPYSTNELLRQLRAFTA 526
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+ L++ + +T S L L+ + L+ L+L+ C K+TD+ ++H+ + L L L +T
Sbjct: 527 LKHLSLVNSPLITDSGLCILSTLVKLQYLNLASCSKLTDSCLQHITGLKNLCFLSLDQTK 586
Query: 152 LTADGIAL-LSSLQN-LSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVL 208
+T G+ L L S+ + LS L L VT+ L L + +L L + ++V + A L
Sbjct: 587 VTDAGMVLYLQSVPSCLSQLSLNQTAVTETTLAVLPTSVPQLRLLSIKQTKVKDLTA--L 644
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL----NLSNCTIDSILEGNENKA-------PLA 257
L LNL TGVT+ +SLE L L++ T+ I + + A L
Sbjct: 645 AAMSSLQTLNLDGTGVTE----ASLEHLATHPALTSLTLVGIPVADGSHALQIISGLKLT 700
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLD------VSNSSLSRFCFLTQMKALEHLDLSSS 311
+I+L G + + +LLS LD +++ +S LT++K L LS++
Sbjct: 701 RITLPGRHSVTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKK---LSLSNT 757
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
+ D + + C+ L+ L L T +S GV L LP+L++L L+ TQ+ D +
Sbjct: 758 QVTDAGLPSLRCM-QELQELCLDRTAVTSRGVADLITCLPHLQVLGLASTQVGDNVVR-- 814
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
KG I+ + L +LNL +T+++D L
Sbjct: 815 ----------------KGLIR-----------------CSQLVKLNLSRTRITDHGL--- 838
Query: 432 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNL-SIR 467
+ + + L+ N T VSL ++SL TN+ SIR
Sbjct: 839 -KYLKQMRLAQVNLDGTGVSLMGIASLLSCTNINSIR 874
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 37/309 (11%)
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
T+ +LR L+ T L++L L S +++ G +L +L +LNLA C
Sbjct: 514 TNELLRQLRAFTALKHLSLVNSPLITDSGLCILSTLVKLQYLNLA-------------SC 560
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET--SLLSFLDVSNSSLSR 293
L++ + I G +N L +SL T + + LY+++ S LS L ++ ++++
Sbjct: 561 SKLTDSCLQHIT-GLKN---LCFLSL-DQTKVTDAGMVLYLQSVPSCLSQLSLNQTAVTE 615
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLP 351
++ L L S I V+ + + A +L+ LNL T + A + LA H P
Sbjct: 616 TTLAVLPTSVPQLRLLS--IKQTKVKDLTALAAMSSLQTLNLDGTGVTEASLEHLATH-P 672
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 411
L L+L G + D + + + ++ LK I+ + + TD LS L L
Sbjct: 673 ALTSLTLVGIPVADGSHA-LQIISGLKLTRIT-------LPGRHSVTDSGLSF--LSRLT 722
Query: 412 HLERLNL-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L L+L + TQ++D + LST L LSL N +TD L L + +L L +
Sbjct: 723 LLSELDLTDYTQITDQGVSHLSTLTRLKKLSLSNTQVTDAGLPSLRCMQELQELCLDRTA 782
Query: 471 LTNSGLGSF 479
+T+ G+
Sbjct: 783 VTSRGVADL 791
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 72/257 (28%)
Query: 281 LSFLDVSNSSL---SRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNT 336
L L + NS L S C L+ + L++L+L+S S + D ++ + + NL L+L T
Sbjct: 527 LKHLSLVNSPLITDSGLCILSTLVKLQYLNLASCSKLTDSCLQHITGL-KNLCFLSLDQT 585
Query: 337 RFSSAGVGILAGHLPN-LEILSLSGTQIDDYAISYM-SMMPSLKFIDISNTDIKGFIQQV 394
+ + AG+ + +P+ L LSL+ T + + ++ + + +P L+ + I T +K
Sbjct: 586 KVTDAGMVLYLQSVPSCLSQLSLNQTAVTETTLAVLPTSVPQLRLLSIKQTKVK------ 639
Query: 395 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL----------------- 437
LTAL ++ L+ LNL+ T V++A+L L+T L
Sbjct: 640 --------DLTALAAMSSLQTLNLDGTGVTEASLEHLATHPALTSLTLVGIPVADGSHAL 691
Query: 438 ----------IHLSLRNA------------------------SLTDVSLHQLSSLSKLTN 463
I L R++ +TD + LS+L++L
Sbjct: 692 QIISGLKLTRITLPGRHSVTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKK 751
Query: 464 LSIRDAVLTNSGLGSFK 480
LS+ + +T++GL S +
Sbjct: 752 LSLSNTQVTDAGLPSLR 768
>gi|30684506|ref|NP_563980.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|23297087|gb|AAN13089.1| unknown protein [Arabidopsis thaliana]
gi|332191234|gb|AEE29355.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 585
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 251/542 (46%), Gaps = 87/542 (16%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
L+ LC+ + E + ++ + LP ++ + L+ + + LE F+ A
Sbjct: 62 LMELCVR---KIQEDIDRYTK----FSDLPRDISQQIFDELVYSQRLTLKSLEAFRDCAI 114
Query: 69 AIELRGEN-SVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
GE V+ +WM + + L S++ + +T S L +L G T L+ L+ + C
Sbjct: 115 QDLYLGEYPGVNDDWMDVISSQSTSLLSVDFSG-SDITDSGLVSLKGCTNLESLNFNFCD 173
Query: 127 KVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
++++ G+ HL +S L L + +TA G+ LS+L NL LDL P D L L+
Sbjct: 174 QISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEKCPGIDGGLVHLR 233
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE---------- 234
LTKLE L++ W + +++ L + L L + + +T + IS L+
Sbjct: 234 ALTKLESLNIKWCNCITDADMEPLSVLTNLRSLQICCSKITDI-GISYLKGLNKLNLLNL 292
Query: 235 --CLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN-EREAF------LYIETSLLSFLD 285
C +++ +D++ +LAG ++N R F + + L L+
Sbjct: 293 EGCRHVTAACLDTL------------TALAGLMYLNLNRCNFSDSGCEKFSDLINLKILN 340
Query: 286 VSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
+ ++++ C L + LE L+L S IGD+ + ++ + L++L LS+T S G+
Sbjct: 341 LGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGSNGL 399
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
L+G L NLE ++LS T + D + +S + SL+ +++ + TD LS
Sbjct: 400 RHLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------TDAGLS 448
Query: 404 -LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-------------------- 442
LT+L L HL+ L +++D+ L K+L L +
Sbjct: 449 ALTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLT 505
Query: 443 -----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 497
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L L
Sbjct: 506 LLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCKLSA 565
Query: 498 ED 499
D
Sbjct: 566 ND 567
>gi|13507547|gb|AAK28636.1|AF360339_1 unknown protein [Arabidopsis thaliana]
Length = 585
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 251/542 (46%), Gaps = 87/542 (16%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
L+ LC+ + E + ++ + LP ++ + L+ + + LE F+ A
Sbjct: 62 LMELCVR---KIQEDIDRYTK----FSDLPRDISQQIFDELVYSQRLTLKSLEAFRDCAI 114
Query: 69 AIELRGEN-SVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
GE V+ +WM + + L S++ + +T S L +L G T L+ L+ + C
Sbjct: 115 QDLYLGEYPGVNDDWMDVISSQSTSLLSVDFSG-SDITDSGLVSLKGCTNLESLNFNFCD 173
Query: 127 KVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
++++ G+ HL +S L L + +TA G+ LS+L NL LDL P D L L+
Sbjct: 174 QISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEKCPGIDGGLVHLR 233
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE---------- 234
LTKLE L++ W + +++ L + L L + + +T + IS L+
Sbjct: 234 ALTKLESLNIKWCNCITDADMEPLSVLTNLRRLQICCSKITDI-GISYLKGLNKLNLLNL 292
Query: 235 --CLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN-EREAF------LYIETSLLSFLD 285
C +++ +D++ +LAG ++N R F + + L L+
Sbjct: 293 EGCRHVTAACLDTL------------TALAGLMYLNLNRCNFSDSGCEKFSDLINLKILN 340
Query: 286 VSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
+ ++++ C L + LE L+L S IGD+ + ++ + L++L LS+T S G+
Sbjct: 341 LGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGSNGL 399
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
L+G L NLE ++LS T + D + +S + SL+ +++ + TD LS
Sbjct: 400 RHLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------TDAGLS 448
Query: 404 -LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-------------------- 442
LT+L L HL+ L +++D+ L K+L L +
Sbjct: 449 ALTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLT 505
Query: 443 -----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 497
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L L
Sbjct: 506 LLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCKLSA 565
Query: 498 ED 499
D
Sbjct: 566 ND 567
>gi|149175912|ref|ZP_01854530.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845359|gb|EDL59704.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 495
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 183/378 (48%), Gaps = 37/378 (9%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T +L + + L L++ + V+D G++++ LE+L+L ET +T +G+ +
Sbjct: 134 KITDESLKHFSNSSDLNTLNVGKTA-VSDRGLQYVSQFKKLERLYLHETQITDEGMQQIQ 192
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+NL L L +TD L +L+ L +LE L L ++++ G L+ RLS L L+
Sbjct: 193 GLKNLKSLMLNETEITDSGLTALRNLDQLEELFLNETKITGAGLKKLERLTRLSKLILSE 252
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 281
T +T +I L+ L L ++ L T ++ + + ++ L
Sbjct: 253 TDITD-ADIKYLKEL-----------------PALKRLYLDQTQLTDDGLSQI-VDFPSL 293
Query: 282 SFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LDVSN+ ++ L K ++LS + I D + ++ L L+LSNT
Sbjct: 294 EMLDVSNNQITDAGLIYLLQNGKQWSSINLSGNQITDAGLSILGKSHIEL-TLDLSNTEV 352
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
+ AG+ L + L LSL+ QI D + + +P+LK I ++ TDI T
Sbjct: 353 TDAGLKYLT-SMNMLFGLSLNNCQISDQGVQTLMELPALKSIQLNGTDI----------T 401
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
D SL ++ + + L L+ T+++DA L L LSL N ++TD SL + +
Sbjct: 402 D--CSLEIIKTKSDMLVLYLDDTKLTDAGFSQLQGLTGLQILSLNNTAVTDASLKFFNKM 459
Query: 459 SKLTNLSIRDAVLTNSGL 476
+KL L+++ ++++ +
Sbjct: 460 TKLFELNLKQTAVSDAAV 477
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 181/388 (46%), Gaps = 29/388 (7%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++TD G+ L + L+ L+++ ++ GI L ++ L L LGG +TD L+
Sbjct: 87 EITDQGLTLLRDLQGLQSLYITNNQISDAGIQQLPQVK-LVELTLGGTKITDESLKHFSN 145
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 241
+ L L++ + VS+RG + F +L L L T G+ ++ + +L+ L L+
Sbjct: 146 SSDLNTLNVGKTAVSDRGLQYVSQFKKLERLYLHETQITDEGMQQIQGLKNLKSLMLNET 205
Query: 242 TI-DSILEGNENKAPLAKISLAGTTF----INEREAFLYIETSLLSFLDVSNSSLSRFCF 296
I DS L N L ++ L T + + E + +LS D++++ + +
Sbjct: 206 EITDSGLTALRNLDQLEELFLNETKITGAGLKKLERLTRLSKLILSETDITDADIK---Y 262
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L ++ AL+ L L + + DD + + +L L++SN + + AG+ L + +
Sbjct: 263 LKELPALKRLYLDQTQLTDDGLSQIVDF-PSLEMLDVSNNQITDAGLIYLLQNGKQWSSI 321
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+LSG QI D +S + +D+SNT++ TD L L ++N L L
Sbjct: 322 NLSGNQITDAGLSILGKSHIELTLDLSNTEV----------TDA--GLKYLTSMNMLFGL 369
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+L Q+SD + L L + L +TD SL + + S + L + D LT++G
Sbjct: 370 SLNNCQISDQGVQTLMELPALKSIQLNGTDITDCSLEIIKTKSDMLVLYLDDTKLTDAGF 429
Query: 477 GSFKPPRSLKLLDLHGGWLLTEDAILQF 504
+ L++L L+ + DA L+F
Sbjct: 430 SQLQGLTGLQILSLNNTAV--TDASLKF 455
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
DDS+ + + +L + T + G+ +L L L+ L ++ QI D I +
Sbjct: 65 DDSILVHVSKLTEVTSLWIIGTEITDQGLTLLR-DLQGLQSLYITNNQISDAGIQ---QL 120
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
P +K ++++ +G SL N + L LN+ +T VSD L +S F
Sbjct: 121 PQVKLVELT----------LGGTKITDESLKHFSNSSDLNTLNVGKTAVSDRGLQYVSQF 170
Query: 435 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
K+L L L +TD + Q+ L L +L + + +T+SGL + +
Sbjct: 171 KKLERLYLHETQITDEGMQQIQGLKNLKSLMLNETEITDSGLTALR 216
>gi|357478391|ref|XP_003609481.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355510536|gb|AES91678.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 576
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 191/431 (44%), Gaps = 65/431 (15%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++ +R +V + M L L++ C + G+ L+ L++ C
Sbjct: 180 NLTSLSIRKSCAVTPDGMRAFSNLVNLEKLDLERCSDI-HGGFVHFKGLKKLESLNIGCC 238
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
VTD+ MK + L++L +S + +T GI+ L LQ LS L++ G +T +
Sbjct: 239 KCVTDSDMKAISGFINLKELQISNSSITDLGISYLRGLQKLSTLNVEGCSITAACFEYIS 298
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
L L L+L +S+ G L L+LA+ +T L ++ LE LNL +
Sbjct: 299 ALAALACLNLNRCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDS 358
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C I G+E L ++L +++ +LS +V NS + +++ +
Sbjct: 359 CQI-----GDEGLVNLTGLTL--------------LKSLVLSDTEVGNSGIR---YISGL 396
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
LE L+LS + + D+ ++ + + NL++LNL + + AG+ L L L L L G
Sbjct: 397 NKLEDLNLSFTSVTDNGLKRLLGL-TNLKSLNLDARQITDAGLANLT-SLSGLITLDLFG 454
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I D +Y+ +L+ ++I G + G + ++ + L +LNL Q
Sbjct: 455 ARITDSGTTYLRSFKNLQSLEICG----GLLTDAGVKN--------IREIVSLTQLNLSQ 502
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
N LTD +L +S ++ L +L++ ++ +TN GL K
Sbjct: 503 -----------------------NCKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYLK 539
Query: 481 PPRSLKLLDLH 491
P ++L+ L L
Sbjct: 540 PLKNLRTLSLE 550
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 217/508 (42%), Gaps = 65/508 (12%)
Query: 9 LVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE 68
L+ LCI + E K+ S LP ++ + L+ + + L F+ A
Sbjct: 54 LMDLCIN---KIREDFHKYE----SFSILPRDISQLIFNELVESHCLTETSLNAFRDCAL 106
Query: 69 AIELRGEN-SVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
GE V+ WM + + L +++V+ VT L L L+ L L+ C
Sbjct: 107 QDVYLGEYLGVNDGWMDVIASQGPSLLAVDVSG-SNVTDHGLRLLKDCLNLQALTLNYCD 165
Query: 127 KVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ ++ G+KHL +S L L + ++ +T DG+ S+L NL LDL +
Sbjct: 166 QFSEHGLKHLSGLSNLTSLSIRKSCAVTPDGMRAFSNLVNLEKLDLERCSDIHGGFVHFK 225
Query: 186 VLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 239
L KLE L++ + V++ + F L L ++ + G++ L + L LN+
Sbjct: 226 GLKKLESLNIGCCKCVTDSDMKAISGFINLKELQISNSSITDLGISYLRGLQKLSTLNVE 285
Query: 240 NCTIDSIL------EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
C+I + L + L+ F + ++ L+F ++++ L
Sbjct: 286 GCSITAACFEYISALAALACLNLNRCGLSDDGF-EKFSGLTGLKRLSLAFNKITDACLVH 344
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
LT+ LE+L+L S IGD+ + NL L L L
Sbjct: 345 LKGLTK---LEYLNLDSCQIGDEGL-------VNLTGLTL-------------------L 375
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
+ L LS T++ + I Y+S + L+ +++S T + TD L L L +L
Sbjct: 376 KSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSV----------TDN--GLKRLLGLTNL 423
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
+ LNL+ Q++DA L L++ LI L L A +TD L S L +L I +LT+
Sbjct: 424 KSLNLDARQITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICGGLLTD 483
Query: 474 SGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
+G+ + + SL L+L LT+ +
Sbjct: 484 AGVKNIREIVSLTQLNLSQNCKLTDKTL 511
>gi|326679785|ref|XP_002660968.2| PREDICTED: hypothetical protein LOC100332407 [Danio rerio]
Length = 537
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 177/374 (47%), Gaps = 26/374 (6%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYLGAFRY 91
SL L LA+ LL H+ R RL+ P LE+F + L E + L AF
Sbjct: 104 SLACLTPELAELLLSHMARERLLRPRTLELFFGCPLQKFVLNCYPYTTNELLRQLRAFTC 163
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+ L+ + +T + L L+ ++ L+ L+LS C K+TD+ ++H+ + +L L L +T
Sbjct: 164 LKHLSFLNSPLITDAGLSVLSNLSKLQHLNLSSCSKLTDSCLQHITGLRSLTFLALDQTK 223
Query: 152 LTADGIALL--SSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVL 208
++ G+ L S L L L +T+ LR L + +L L + ++VS+ + L
Sbjct: 224 VSDAGLLLYLQSGSSALCQLSLNQTAITESTLRVLPASVPQLRMLSIKHTKVSD--VSAL 281
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL----NLSNCTIDSI--LEGNENKAPLAKISLA 262
L L+L TGV + +SL+CL +LS ++ I +GN +A + L
Sbjct: 282 AELKNLQTLHLDGTGVQE----NSLQCLASHPSLSALSLAGIPVADGNHTLEIIAGLRLT 337
Query: 263 GTTFINERE------AFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIG 314
T +FL +T LL + L+ L+ M L+ L LS++ +
Sbjct: 338 QLTLPGRHSVTDSGLSFLSRQTLLLELDLTDYTQLTDHGITQLSSMTRLKKLSLSNTQVS 397
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY-MSM 373
D ++ + + L+ L L T +S GV L HLP+L+++ L+ TQ+ D I +
Sbjct: 398 DSGLQGLIRL-KELQELCLDRTAVTSRGVAALITHLPHLQVMGLASTQVGDTVIRRGLVH 456
Query: 374 MPSLKFIDISNTDI 387
P L +++S T I
Sbjct: 457 CPQLLKLNLSRTRI 470
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 44/286 (15%)
Query: 214 LSFLN---LAWTGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFIN 268
LSFLN + G++ L N+S L+ LNLS+C+ DS L+ L ++L T ++
Sbjct: 167 LSFLNSPLITDAGLSVLSNLSKLQHLNLSSCSKLTDSCLQHITGLRSLTFLAL-DQTKVS 225
Query: 269 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 328
+ LY++ S SS AL L L+ + I + ++ ++ L
Sbjct: 226 DAGLLLYLQ---------SGSS-----------ALCQLSLNQTAITESTLRVLPASVPQL 265
Query: 329 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 388
R L++ +T+ S V LA L NL+ L L GT + + ++ ++ PSL + ++ +
Sbjct: 266 RMLSIKHTKVSD--VSALA-ELKNLQTLHLDGTGVQENSLQCLASHPSLSALSLAGIPVA 322
Query: 389 GFIQQVGAETDLVLSLTAL--------QNLNHLER-------LNLEQTQVSDATLFPLST 433
+ L L+ L L+ L R + TQ++D + LS+
Sbjct: 323 DGNHTLEIIAGLRLTQLTLPGRHSVTDSGLSFLSRQTLLLELDLTDYTQLTDHGITQLSS 382
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
L LSL N ++D L L L +L L + +T+ G+ +
Sbjct: 383 MTRLKKLSLSNTQVSDSGLQGLIRLKELQELCLDRTAVTSRGVAAL 428
>gi|226534290|gb|ACO71421.1| AT4G23840-like protein [Capsella rubella]
gi|226534292|gb|ACO71422.1| AT4G23840-like protein [Capsella rubella]
gi|226534294|gb|ACO71423.1| AT4G23840-like protein [Capsella rubella]
gi|226534296|gb|ACO71424.1| AT4G23840-like protein [Capsella rubella]
gi|226534298|gb|ACO71425.1| AT4G23840-like protein [Capsella rubella]
gi|226534300|gb|ACO71426.1| AT4G23840-like protein [Capsella rubella]
gi|226534302|gb|ACO71427.1| AT4G23840-like protein [Capsella rubella]
gi|226534304|gb|ACO71428.1| AT4G23840-like protein [Capsella rubella]
gi|226534306|gb|ACO71429.1| AT4G23840-like protein [Capsella rubella]
gi|226534308|gb|ACO71430.1| AT4G23840-like protein [Capsella rubella]
gi|226534310|gb|ACO71431.1| AT4G23840-like protein [Capsella rubella]
gi|226534312|gb|ACO71432.1| AT4G23840-like protein [Capsella rubella]
gi|226534314|gb|ACO71433.1| AT4G23840-like protein [Capsella rubella]
gi|226534316|gb|ACO71434.1| AT4G23840-like protein [Capsella rubella]
gi|226534318|gb|ACO71435.1| AT4G23840-like protein [Capsella rubella]
gi|226534320|gb|ACO71436.1| AT4G23840-like protein [Capsella rubella]
gi|226534324|gb|ACO71438.1| AT4G23840-like protein [Capsella rubella]
gi|226534326|gb|ACO71439.1| AT4G23840-like protein [Capsella rubella]
gi|226534328|gb|ACO71440.1| AT4G23840-like protein [Capsella rubella]
gi|226534330|gb|ACO71441.1| AT4G23840-like protein [Capsella rubella]
gi|226534332|gb|ACO71442.1| AT4G23840-like protein [Capsella rubella]
gi|226534334|gb|ACO71443.1| AT4G23840-like protein [Capsella rubella]
gi|226534336|gb|ACO71444.1| AT4G23840-like protein [Capsella rubella]
gi|226534338|gb|ACO71445.1| AT4G23840-like protein [Capsella rubella]
gi|226534340|gb|ACO71446.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534346|gb|ACO71449.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534350|gb|ACO71451.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LTKLEYLD+WGS V+N GA + F LSFLNL+WT VT+ NI LECL+++ C I SI
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSFLNLSWTSVTQTLNIPHLECLHMNKCDIVSI 61
Query: 247 LEGNENK-APLAKISLAGTTFINEREAF 273
+ + + A L K+ L+G TF E E+F
Sbjct: 62 SKTHSSPLASLKKLVLSGATFSAETESF 89
>gi|168698219|ref|ZP_02730496.1| hypothetical protein GobsU_01767 [Gemmata obscuriglobus UQM 2246]
Length = 380
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 157/352 (44%), Gaps = 42/352 (11%)
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KL 227
G VTD L+ L L L +DL + V+N G VL F L+ L+L TG+T +L
Sbjct: 57 GHRVTDEELKELLPLKSLTSIDLSHTGVTNAGLKVLVAFKSLTTLSLHDTGITDAGLKEL 116
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+ +L NLSN + T + E A + L +++
Sbjct: 117 APLKNLTAFNLSNTKVTD-------------------TGLKELTAIRNLTALHLRKTEIT 157
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
++ L L MK L LDLS + + D ++ +A + L NL L NT + G+ LA
Sbjct: 158 DAGLKS---LPPMKDLTTLDLSDTKVTDAGLKALAPL-ERLTNLYLYNTEVTDTGLKELA 213
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 407
NL +L L T++ D + ++ + SL + + T++ TD L L
Sbjct: 214 PS-KNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGETEV----------TDA--GLKEL 260
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
L +L LNL T+V+DA + L+ F+ L L L ++TD + +L+ L +L +
Sbjct: 261 APLKNLTALNLYGTKVTDAGVKELAPFQNLTLLDLSGTNVTDAGIKELARFKNLAHLELS 320
Query: 468 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 519
+T+ GL + L L L T I +F K P+ +VW+ LS+
Sbjct: 321 STAVTDVGLKELASLKKLTKLFLISTK-TTFAGIKEFQKAAPKCDVWNTLSL 371
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 27/295 (9%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ L AF+ L +L++ D +T + L L + L +LS KVTD G+K L +I L
Sbjct: 89 LKVLVAFKSLTTLSLHDTG-ITDAGLKELAPLKNLTAFNLSNT-KVTDTGLKELTAIRNL 146
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L +T +T G+ L +++L+ LDL VTD L++L L +L L L+ ++V++
Sbjct: 147 TALHLRKTEITDAGLKSLPPMKDLTTLDLSDTKVTDAGLKALAPLERLTNLYLYNTEVTD 206
Query: 203 RGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
G L L+ L L T VT +L + SL L L + G + APL
Sbjct: 207 TGLKELAPSKNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGETEVTD--AGLKELAPLK 264
Query: 258 KIS---LAGTTF----INEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDL 308
++ L GT + E F L+ LD+S ++++ L + K L HL+L
Sbjct: 265 NLTALNLYGTKVTDAGVKELAPFQN-----LTLLDLSGTNVTDAGIKELARFKNLAHLEL 319
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI---LSLSG 360
SS+ + D ++ +A + L L L +T+ + AG+ P ++ LSL G
Sbjct: 320 SSTAVTDVGLKELASL-KKLTKLFLISTKTTFAGIKEFQKAAPKCDVWNTLSLKG 373
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM----------- 114
N A+ LR DA + L + L +L+++D + VT + L AL +
Sbjct: 145 NLTALHLRKTEITDA-GLKSLPPMKDLTTLDLSDTK-VTDAGLKALAPLERLTNLYLYNT 202
Query: 115 ----TCLKELDLSRCV--------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
T LKEL S+ + KVTDAG+K L + +L L L ET +T G+ L+
Sbjct: 203 EVTDTGLKELAPSKNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGETEVTDAGLKELAP 262
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+NL+ L+L G VTD ++ L L LDL G+ V++ G L F L+ L L+ T
Sbjct: 263 LKNLTALNLYGTKVTDAGVKELAPFQNLTLLDLSGTNVTDAGIKELARFKNLAHLELSST 322
Query: 223 GVTK--LPNISSLECL 236
VT L ++SL+ L
Sbjct: 323 AVTDVGLKELASLKKL 338
>gi|46447653|ref|YP_009018.1| hypothetical protein pc2019 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401294|emb|CAF24743.1| hypothetical protein pc2019 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 959
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 217/449 (48%), Gaps = 43/449 (9%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L L +A C +T + L L + L+ L+L+ C K+TDAG+ HL S+ TL
Sbjct: 384 LAHLDSLIDLTQLGLAKCHNITDNGLAYLRPLIALQGLNLNGCKKLTDAGLVHLKSLVTL 443
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLG--GLPVTDLVLRSLQVLTKLEYLDL-WGS 198
L LS+ LT G+A L+ L L LDL +TD L L L L+ LDL +
Sbjct: 444 TYLNLSQCDDLTDAGLAHLTPLVALQHLDLSFCCYNITDAGLAHLTPLVALQNLDLSFCY 503
Query: 199 QVSNRGAAVLKMFPRLSFLNLAW-------TGVTKLPNISSLECLNLSNCT--IDSILEG 249
++++ G A LK L LNL W G+ L + +L+ L+L C D L
Sbjct: 504 KLTDDGLAHLKPLVALKQLNL-WACSNLTGAGLAHLTPLIALKHLDLGFCYGLTDDGLAH 562
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR-----FCFLTQMKALE 304
+ L +SL+G + +A L TSL++ ++ SS + L + AL+
Sbjct: 563 LKPLVALQYLSLSGCKKL--TDAGLAHLTSLITLQQLNISSCANLTDDGLAHLKPLIALQ 620
Query: 305 HLDLSS--SMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLS-G 360
L+LSS + G + + V NL +L+LS + AG+ LA L L+ L L+
Sbjct: 621 QLNLSSCKKLTGVGLAHLTSLV--NLTHLSLSECGNLTDAGLAHLAP-LVALQQLDLNFC 677
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+ D ++++ + +L+ + ++ G TD L L L L++LNL
Sbjct: 678 YNLTDAGLAHLITLVALQQL---------YLSACGNLTD--AGLAHLTPLVALQQLNLSG 726
Query: 421 T-QVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLG 477
+++ L L++ L HLSL A+LTD L L++L LT L++ D T +GL
Sbjct: 727 CKKLTGVGLAHLTSLATLTHLSLSACANLTDDGLAHLTTLVALTYLNLSDCNNFTGAGLT 786
Query: 478 SFKPPRSLKLLDLHGGWLLTEDAILQFCK 506
KP +L+ L L G LT DA L + K
Sbjct: 787 HLKPLVALQYLSLSGCKKLT-DAGLAYLK 814
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 209/461 (45%), Gaps = 76/461 (16%)
Query: 83 MAYLGAFRYLRSLNVA-DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
+A+L L+ L+++ C +T + L LT + L+ LDLS C K+TD G+ HL +
Sbjct: 459 LAHLTPLVALQHLDLSFCCYNITDAGLAHLTPLVALQNLDLSFCYKLTDDGLAHLKPLVA 518
Query: 142 LEKLWL-SETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWG-S 198
L++L L + + LT G+A L+ L L LDLG +TD L L+ L L+YL L G
Sbjct: 519 LKQLNLWACSNLTGAGLAHLTPLIALKHLDLGFCYGLTDDGLAHLKPLVALQYLSLSGCK 578
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNEN 252
++++ G A L L LN++ G+ L + +L+ LNLS+C
Sbjct: 579 KLTDAGLAHLTSLITLQQLNISSCANLTDDGLAHLKPLIALQQLNLSSC----------- 627
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-- 310
L + LA T + + + LS + N + + L + AL+ LDL+
Sbjct: 628 -KKLTGVGLAHLTSL--------VNLTHLSLSECGNLTDAGLAHLAPLVALQQLDLNFCY 678
Query: 311 -----------SMIGDDSVEMVACVG------------ANLRNLNLSNTRFSSAGVGILA 347
+++ + + AC L+ LNLS + GVG+
Sbjct: 679 NLTDAGLAHLITLVALQQLYLSACGNLTDAGLAHLTPLVALQQLNLSGCK-KLTGVGL-- 735
Query: 348 GHLPNLEIL---SLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
HL +L L SLS + D +++++ + +L ++++S D F GA
Sbjct: 736 AHLTSLATLTHLSLSACANLTDDGLAHLTTLVALTYLNLS--DCNNF---TGA------G 784
Query: 404 LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKL 461
LT L+ L L+ L+L + ++DA L L L L+LR +TD L L SL L
Sbjct: 785 LTHLKPLVALQYLSLSGCKKLTDAGLAYLKPLVALQQLNLRGCKKITDAGLTHLMSLVAL 844
Query: 462 TNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
LS+ LT+ GL KP +L L L LT+D +
Sbjct: 845 QCLSLSGCKKLTDDGLAHLKPLVALTHLSLGECVKLTDDGL 885
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 186/434 (42%), Gaps = 86/434 (19%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L G + +A+L + L+ LN++ C +T L L + L++L+LS C K
Sbjct: 570 QYLSLSGCKKLTDAGLAHLTSLITLQQLNISSCANLTDDGLAHLKPLIALQQLNLSSCKK 629
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQ 185
+T G+ HL S+ L L LSE G LT G+A L+ L L LDL +TD L L
Sbjct: 630 LTGVGLAHLTSLVNLTHLSLSECGNLTDAGLAHLAPLVALQQLDLNFCYNLTDAGLAHLI 689
Query: 186 VLTKLE--YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 243
L L+ YL G NL G+ L + +L+ LNLS C
Sbjct: 690 TLVALQQLYLSACG--------------------NLTDAGLAHLTPLVALQQLNLSGC-- 727
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
L + LA T S +++ SLS LT L
Sbjct: 728 ----------KKLTGVGLAHLT----------------SLATLTHLSLSACANLTD-DGL 760
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT-Q 362
HL +VA NL + N F+ AG+ L L L+ LSLSG +
Sbjct: 761 AHL-----------TTLVALTYLNLSDCN----NFTGAGLTHLKP-LVALQYLSLSGCKK 804
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ--NLNHLERLNLEQ 420
+ D ++Y+ + +L+ + +++G + A ++SL ALQ +L+ ++L
Sbjct: 805 LTDAGLAYLKPLVALQQL-----NLRGCKKITDAGLTHLMSLVALQCLSLSGCKKL---- 855
Query: 421 TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGS 478
+D L L L HLSL LTD L L+ L LT+L++ D LT +GL
Sbjct: 856 ---TDDGLAHLKPLVALTHLSLGECVKLTDDGLAHLTPLLALTHLNLSDCNNLTVAGLAH 912
Query: 479 FKPPRSLKLLDLHG 492
P +L +DL+
Sbjct: 913 LTPLENLTYVDLNN 926
>gi|290997932|ref|XP_002681535.1| predicted protein [Naegleria gruberi]
gi|284095159|gb|EFC48791.1| predicted protein [Naegleria gruberi]
Length = 448
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/413 (19%), Positives = 174/413 (42%), Gaps = 81/413 (19%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ AE ++ + L SL++ + ++ M L L++ ++ D G K +
Sbjct: 38 IGAEGAKFISEMKQLTSLDIG-GNEIGDEGSKYISEMKQLTSLNIDNN-RIGDEGAKSIS 95
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L L ++ + +G +S ++ L+ LD+ G + D ++ + + +L+ LD+ G
Sbjct: 96 EMKQLTSLSINNNEIGVEGAKSISEMKQLTSLDISGNGIGDKGVKFISEMKQLKLLDIGG 155
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNEN 252
+++ + G+ + +L+ LN+ GV + + L L++ N I G+E
Sbjct: 156 NEIGDEGSKYISEMKQLTSLNIGENRIGDEGVKSISEMKQLTSLSIYNNRI-----GDEG 210
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSS 310
++ E L+ LD+S + + +++MK L LD+S
Sbjct: 211 AKSIS-------------------EMKQLTSLDISGNGIGDKGVKSISEMKQLTSLDISG 251
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+ IGD+ + ++ + L++L + G +I D Y
Sbjct: 252 NGIGDEGAKFIS--------------------------EMKQLKLLDIGGNEIGDEGSKY 285
Query: 371 MSMMPSLKFIDISNTDI--KG---------------FIQQVGAETDLVLSLTALQNLNHL 413
+S M L ++I N +I +G + Q+G E + ++ + L
Sbjct: 286 ISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNNQIGVE-----GVKSISEMKQL 340
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+ LN+ ++ D + +S K+LI L++ + D + +S + +LT+L+I
Sbjct: 341 KSLNICYNEIGDKGVKFISEMKQLISLNIGGNGIGDEGVKSISEMKQLTSLNI 393
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 173/381 (45%), Gaps = 40/381 (10%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M LK LD+ ++ D G K + + L L + + + A+G +S ++ L+ LD+GG
Sbjct: 1 MKQLKLLDIGEN-QIGDEGAKSISEMKQLTSLDICYSRIGAEGAKFISEMKQLTSLDIGG 59
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL--NLAWTGVTKLPNIS 231
+ D + + + +L L++ +++ + GA + +L+ L N GV +IS
Sbjct: 60 NEIGDEGSKYISEMKQLTSLNIDNNRIGDEGAKSISEMKQLTSLSINNNEIGVEGAKSIS 119
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
++ L ++D + GN I G FI+E + L LD+ + +
Sbjct: 120 EMKQL----TSLD--ISGN-------GIGDKGVKFISEMKQ--------LKLLDIGGNEI 158
Query: 292 SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
++++MK L L++ + IGD+ V+ ++ + L +L++ N R G ++
Sbjct: 159 GDEGSKYISEMKQLTSLNIGENRIGDEGVKSISEM-KQLTSLSIYNNRIGDEGAKSIS-E 216
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
+ L L +SG I D + +S M L +DIS I G E +S
Sbjct: 217 MKQLTSLDISGNGIGDKGVKSISEMKQLTSLDISGNGI-------GDEGAKFIS-----E 264
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
+ L+ L++ ++ D +S K+L L++ N + + +S + +LT+L I +
Sbjct: 265 MKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNN 324
Query: 470 VLTNSGLGSFKPPRSLKLLDL 490
+ G+ S + LK L++
Sbjct: 325 QIGVEGVKSISEMKQLKSLNI 345
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 135/316 (42%), Gaps = 59/316 (18%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
+ +L+ LD+ +Q+ + GA + +L+ L++ ++
Sbjct: 1 MKQLKLLDIGENQIGDEGAKSISEMKQLTSLDICYS------------------------ 36
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALE 304
+I G FI+E + L+ LD+ + + ++++MK L
Sbjct: 37 -----------RIGAEGAKFISEMKQ--------LTSLDIGGNEIGDEGSKYISEMKQLT 77
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
L++ ++ IGD+ + ++ + L +L+++N G ++ + L L +SG I
Sbjct: 78 SLNIDNNRIGDEGAKSISEM-KQLTSLSINNNEIGVEGAKSIS-EMKQLTSLDISGNGIG 135
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
D + ++S M LK +DI +I G E +S + L LN+ + ++
Sbjct: 136 DKGVKFISEMKQLKLLDIGGNEI-------GDEGSKYIS-----EMKQLTSLNIGENRIG 183
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
D + +S K+L LS+ N + D +S + +LT+L I + + G+ S +
Sbjct: 184 DEGVKSISEMKQLTSLSIYNNRIGDEGAKSISEMKQLTSLDISGNGIGDKGVKSISEMKQ 243
Query: 485 LKLLDLHGGWLLTEDA 500
L LD+ G + E A
Sbjct: 244 LTSLDISGNGIGDEGA 259
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 142/316 (44%), Gaps = 31/316 (9%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E Y+ + L SLN+ + R+ + +++ M L L + ++ D G
Sbjct: 154 GGNEIGDEGSKYISEMKQLTSLNIGE-NRIGDEGVKSISEMKQLTSLSIYNN-RIGDEGA 211
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L +S G+ G+ +S ++ L+ LD+ G + D + + + +L+ L
Sbjct: 212 KSISEMKQLTSLDISGNGIGDKGVKSISEMKQLTSLDISGNGIGDEGAKFISEMKQLKLL 271
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSNCTIDSILE 248
D+ G+++ + G+ + +L+ LN + GV + + L L + N
Sbjct: 272 DIGGNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYN-------- 323
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 308
+I + G I+E + + + + ++ + + F+++MK L L++
Sbjct: 324 --------NQIGVEGVKSISEMKQLKSLN---ICYNEIGDKGVK---FISEMKQLISLNI 369
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ IGD+ V+ ++ + L +LN+S R + G ++ + L L + +I +
Sbjct: 370 GGNGIGDEGVKSISEM-KQLTSLNISKNRIGAEGSKFIS-EMKQLTSLDICYNEIGGEGV 427
Query: 369 SYMSMMPSLKFIDISN 384
+S M LK + I N
Sbjct: 428 KSISEMKQLKSLSIHN 443
>gi|325106627|ref|YP_004267695.1| hypothetical protein Plabr_0042 [Planctomyces brasiliensis DSM
5305]
gi|324966895|gb|ADY57673.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 526
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 178/388 (45%), Gaps = 36/388 (9%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ Y+ AFR+L+S+++ + +++ + L L G+ L+E++L R V A +K L + L
Sbjct: 137 LRYVKAFRFLKSIDL-NQNKLSEAGLCHLEGLVSLREVNLRRS-SVNGAALKWLQRLVLL 194
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
EKL L T T G++ L+ + L L LGG + D L L +LE LDL G+ +S+
Sbjct: 195 EKLDLRNTNFTHHGLSFLTYFRRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSGTPISD 254
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI-DSILEGNENKAPL 256
+ L PRL L + T V+ L ++S+L L++ + S ++ E +P
Sbjct: 255 QAMKTLAQLPRLKRLYVPGTAVSDEGLQLLTSVSTLIALDVRKTAVTPSGVQQLEQHSPG 314
Query: 257 AKIS-----LAGTTFINEREAFLY--IETSLLSFLDV--------SNSSLSRFCFLTQMK 301
KI L + I R+ +L DV ++ + F L
Sbjct: 315 LKIKSDAADLPSSHVIRSRDVLQMHGCHLTLSRSGDVIACQAGEDASPPIHWFSALESFS 374
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
+L+ L+L+ + + ++ + + + L++L L F + +L L L L L T
Sbjct: 375 SLKSLELNRLALDGEQLQFLKNM-SQLQSLALKQCTFPPEALSVLKS-LNRLAWLDLRDT 432
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+ D ++ + +PSL + +S T + G E SL++ L L + E
Sbjct: 433 PVSDESLQALGELPSLSNLCLSRTGVTA----TGLE-----SLSSAPLLRDL--VIKECG 481
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTD 449
Q+ D + L FK L HL +R ++T+
Sbjct: 482 QIGDPAVLALEKFKNLKHLDIRGTNITE 509
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 211/479 (44%), Gaps = 60/479 (12%)
Query: 70 IELRGEN-SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
++L+ +N +D + + +G R L+ L+++ + + L+ + L+ +++ +V
Sbjct: 75 LKLKCQNCDIDFDTLELIGQLRSLQELDLSGTS-LDDIGMEKLSKLEQLRTFAIAK-TRV 132
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
TD G++++ + L+ + L++ L+ G+ L L +L ++L V L+ LQ L
Sbjct: 133 TDNGLRYVKAFRFLKSIDLNQNKLSEAGLCHLEGLVSLREVNLRRSSVNGAALKWLQRLV 192
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
LE LDL + ++ G + L F RL L L G+ L LE L+LS I
Sbjct: 193 LLEKLDLRNTNFTHHGLSFLTYFRRLRSLKLGGNRIEDDGLFPLLQFPRLESLDLSGTPI 252
Query: 244 -DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
D ++ L ++ + GT +E L ++L++ LDV ++++ + ++
Sbjct: 253 SDQAMKTLAQLPRLKRLYVPGTAVSDEGLQLLTSVSTLIA-LDVRKTAVTP----SGVQQ 307
Query: 303 LEH-----------LDLSSSMI--GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
LE DL SS + D ++M C +L LS S + AG
Sbjct: 308 LEQHSPGLKIKSDAADLPSSHVIRSRDVLQMHGC------HLTLSR---SGDVIACQAGE 358
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVL--- 402
+ I + S + SLK ++++ + G F++ + L L
Sbjct: 359 DASPPI----------HWFSALESFSSLKSLELNRLALDGEQLQFLKNMSQLQSLALKQC 408
Query: 403 -----SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 457
+L+ L++LN L L+L T VSD +L L L +L L +T L LSS
Sbjct: 409 TFPPEALSVLKSLNRLAWLDLRDTPVSDESLQALGELPSLSNLCLSRTGVTATGLESLSS 468
Query: 458 LSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
L +L I++ + + + + + ++LK LD+ G +TE + P ++ H
Sbjct: 469 APLLRDLVIKECGQIGDPAVLALEKFKNLKHLDIRGTN-ITEQGFCVLTQDLPSCKIRH 526
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 148/338 (43%), Gaps = 58/338 (17%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E ++LR N +++L FR LRSL + R+ L+ L L+ LDLS
Sbjct: 195 EKLDLRNTN-FTHHGLSFLTYFRRLRSLKLGG-NRIEDDGLFPLLQFPRLESLDLS-GTP 251
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ-- 185
++D MK L + L++L++ T ++ +G+ LL+S+ L LD+ VT ++ L+
Sbjct: 252 ISDQAMKTLAQLPRLKRLYVPGTAVSDEGLQLLTSVSTLIALDVRKTAVTPSGVQQLEQH 311
Query: 186 ---VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-----------------VT 225
+ K + DL S V R VL+M L L+ +G +
Sbjct: 312 SPGLKIKSDAADLPSSHVI-RSRDVLQMHG--CHLTLSRSGDVIACQAGEDASPPIHWFS 368
Query: 226 KLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
L + SSL+ L L+ +D L+ +N + L ++L TF E + L + L++L
Sbjct: 369 ALESFSSLKSLELNRLALDGEQLQFLKNMSQLQSLALKQCTFPPEALSVLK-SLNRLAWL 427
Query: 285 DVSNS--------------SLSRFCF-LTQMKALEHLDLSSS------------MIGDDS 317
D+ ++ SLS C T + A LSS+ IGD +
Sbjct: 428 DLRDTPVSDESLQALGELPSLSNLCLSRTGVTATGLESLSSAPLLRDLVIKECGQIGDPA 487
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
V + NL++L++ T + G +L LP+ +I
Sbjct: 488 VLALEKF-KNLKHLDIRGTNITEQGFCVLTQDLPSCKI 524
>gi|226534322|gb|ACO71437.1| AT4G23840-like protein [Capsella rubella]
Length = 90
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LTKLEYLD+WGS V++ GA + F LSFLNL+WT VT+ NI LECL+++ C I SI
Sbjct: 2 LTKLEYLDIWGSNVTDLGAICILKFSNLSFLNLSWTSVTQTLNIPHLECLHMNKCDIVSI 61
Query: 247 LEGNENK-APLAKISLAGTTFINEREAF 273
+ + + A L K+ L+G TF E E+F
Sbjct: 62 SKTHSSPLASLKKLVLSGATFSAETESF 89
>gi|168705463|ref|ZP_02737740.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 362
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 53/343 (15%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L+ L L+ LDL PVTD L+ L LTKL L+L G+++++ G L L+ LNL
Sbjct: 63 LAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLGGTKITDAGPTELAPLAVLTDLNL 122
Query: 220 AWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ T VT ++ + +L L+LS+ + + G+ + +SL GT +
Sbjct: 123 SSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLGHLTLTKMRSLSLRGTKITDG--GLR 180
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
I +S LD+S ++L+ + L+ L L + G L+LS
Sbjct: 181 EIRIMSVSGLDLSGTALTD-------EGLKDLGLFEEITG----------------LDLS 217
Query: 335 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 394
+T+ +S G+ LA P L+ LSLS T++ D + +++ + L+ + ++ T + G
Sbjct: 218 DTKVTSNGLKELASQ-PTLKFLSLSRTKVGDAGLKHLAPLKRLESLYLNGTGVTG----- 271
Query: 395 GAETDLVLSLTALQNLNHLERL---NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
T ++ L LERL L T V+ L LST L L L +A++TD
Sbjct: 272 ----------TGVKELAPLERLRILELTGTMVTGGGLKHLSTLPRLAILRLSDAAVTDEG 321
Query: 452 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 494
L ++ L L L + +T +G+ + ++L D+ GW
Sbjct: 322 LKDIAHLKTLLALDLYRTKVTGAGVAELR--KALPRCDI--GW 360
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 39 AHLADSLLRHLIRR--RLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLN 96
HL + +R L R ++ L E+ + ++L G D E + LG F + L+
Sbjct: 157 GHLTLTKMRSLSLRGTKITDGGLREIRIMSVSGLDLSGTALTD-EGLKDLGLFEEITGLD 215
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG 156
++D + VTS+ L L LK L LSR KV DAG+KHL + LE L+L+ TG+T G
Sbjct: 216 LSDTK-VTSNGLKELASQPTLKFLSLSRT-KVGDAGLKHLAPLKRLESLYLNGTGVTGTG 273
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ L+ L+ L +L+L G VT L+ L L +L L L + V++ G + L
Sbjct: 274 VKELAPLERLRILELTGTMVTGGGLKHLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLA 333
Query: 217 LNLAWTGVT 225
L+L T VT
Sbjct: 334 LDLYRTKVT 342
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 164/364 (45%), Gaps = 74/364 (20%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ LRG+ DA+ A L L L+++ VT + L L +T L L+L K+T
Sbjct: 48 VMLRGKTVTDADLKA-LAPLTGLTDLDLSSTP-VTDAGLKHLAPLTKLTALNLG-GTKIT 104
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DAG L ++ L L LS T +T G+ ++ L+ L LDL VT+ L L LTK
Sbjct: 105 DAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLGHL-TLTK 163
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 249
+ L L G+++++ G +++ ++S L+
Sbjct: 164 MRSLSLRGTKITDGGLREIRIM-----------------SVSGLD--------------- 191
Query: 250 NENKAPLAKISLAGTTFINE--REAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEH 305
L+GT +E ++ L+ E ++ LD+S++ ++ L L+
Sbjct: 192 -----------LSGTALTDEGLKDLGLFEE---ITGLDLSDTKVTSNGLKELASQPTLKF 237
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L LS + +GD ++ +A + L +L L+ T + GV LA L L IL L+GT +
Sbjct: 238 LSLSRTKVGDAGLKHLAPL-KRLESLYLNGTGVTGTGVKELA-PLERLRILELTGTMVTG 295
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER---LNLEQTQ 422
+ ++S +P L + +S+ A TD L+++ HL+ L+L +T+
Sbjct: 296 GGLKHLSTLPRLAILRLSDA----------AVTD-----EGLKDIAHLKTLLALDLYRTK 340
Query: 423 VSDA 426
V+ A
Sbjct: 341 VTGA 344
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 386 DIKGFIQQV--GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
D KG + V +T L AL L L L+L T V+DA L L+ +L L+L
Sbjct: 40 DPKGVVTHVMLRGKTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLG 99
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+TD +L+ L+ LT+L++ +T++GL R+L LDL
Sbjct: 100 GTKITDAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDL 146
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 358 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
L G + D + ++ + L +D+S+T + TD L L L L LN
Sbjct: 50 LRGKTVTDADLKALAPLTGLTDLDLSSTPV----------TDA--GLKHLAPLTKLTALN 97
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 477
L T+++DA L+ L L+L + +TD L +++ L L L + +TN+GLG
Sbjct: 98 LGGTKITDAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLG 157
Query: 478 SF 479
Sbjct: 158 HL 159
>gi|46446776|ref|YP_008141.1| hypothetical protein pc1142 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400417|emb|CAF23866.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 590
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 174/367 (47%), Gaps = 35/367 (9%)
Query: 30 QRRSLERLPAHLADSL--LRHLIRRRLIFPSLLEVFK-HNAEAIELRGENSVDAEWMAYL 86
Q ER+ HL++ + L L L LL + N + + + V +A+L
Sbjct: 212 QLSEFERIINHLSNKIEALNFLENTHLTNAHLLALKDCKNVKVLYFKKCRDVTDAGLAHL 271
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
L+ L ++DC +T + L LT +T L+ LDLS C +TD+G+ HL + L+ L
Sbjct: 272 TPLTALQHLGLSDCENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVHLTPLVGLQHLG 331
Query: 147 LSET-GLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNR 203
LS+ LT G+A L+SL L LDL +TD L L LT L++LDL +++
Sbjct: 332 LSDCENLTVAGLAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDA 391
Query: 204 GAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
G A L L LNL G+ L +++L+ L+LS C
Sbjct: 392 GLAHLTPLTALQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYC---------------Y 436
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDD 316
++ AG + A L++ S ++ + L+ LT + AL+HL+LS + + D
Sbjct: 437 NLTDAGLAHLTPLTALLHLNLS--ECWKLTGAGLAH---LTPLVALQHLNLSKCNNLTDA 491
Query: 317 SVEMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 375
+ +A + A L++LNLS +F+ AG+ L + + + D + +++ +
Sbjct: 492 GLVHLAPLTA-LQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDAGLVHLTPLT 550
Query: 376 SLKFIDI 382
+L+++D+
Sbjct: 551 ALQYLDL 557
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 12/197 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ LN+ CR++T + L LT +T L+ LDLS C +TDAG+ H
Sbjct: 387 NLTDA-GLAHLTPLTALQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYCYNLTDAGLAH 445
Query: 136 LLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYL 193
L ++ L L LSE LT G+A L+ L L L+L +TD L L LT L++L
Sbjct: 446 LTPLTALLHLNLSECWKLTGAGLAHLTPLVALQHLNLSKCNNLTDAGLVHLAPLTALQHL 505
Query: 194 DL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCT--ID 244
+L W + ++ G A L + L L NL G+ L +++L+ L+L C D
Sbjct: 506 NLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDAGLVHLTPLTALQYLDLIGCKNLTD 565
Query: 245 SILEGNENKAPLAKISL 261
+ LE + A L +++
Sbjct: 566 AGLERFKTLAALPNLTI 582
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 188/420 (44%), Gaps = 82/420 (19%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET- 150
+ +LN + +T++ L AL +K L +C VTDAG+ HL ++ L+ L LS+
Sbjct: 227 IEALNFLENTHLTNAHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDCE 286
Query: 151 GLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
LT G+A L++L L LDL G +TD L L L L++L L +
Sbjct: 287 NLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVHLTPLVGLQHLGLSDCE---------- 336
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
NL G+ L ++++L+ L+L NC
Sbjct: 337 --------NLTVAGLAHLTSLTALQHLDLRNC---------------------------- 360
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANL 328
+++++ L+ LT + AL+HLDLS + D + + + A L
Sbjct: 361 --------------YNLTDAGLAH---LTPLTALQHLDLSCCYNLTDAGLAHLTPLTA-L 402
Query: 329 RNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTD 386
++LNL R + AG+ L L L+ L LS + D +++++ + +L +++S
Sbjct: 403 QHLNLCCCRKLTDAGLAHLTP-LTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSEC- 460
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NA 445
+ GA + L ALQ+LN L + N ++DA L L+ L HL+L
Sbjct: 461 ----WKLTGAGLAHLTPLVALQHLN-LSKCN----NLTDAGLVHLAPLTALQHLNLSWCK 511
Query: 446 SLTDVSLHQLSSLSKLTNLS-IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
TD L L+ L+ L +L I LT++GL P +L+ LDL G LT+ + +F
Sbjct: 512 KFTDAGLAHLTLLTALQSLDLIGCNNLTDAGLVHLTPLTALQYLDLIGCKNLTDAGLERF 571
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 411 NHLERLN-LEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD 468
N +E LN LE T +++A L L K + L + +TD L L+ L+ L +L + D
Sbjct: 225 NKIEALNFLENTHLTNAHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSD 284
Query: 469 AV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
LT++GL +L+ LDL G W LT+ ++ +
Sbjct: 285 CENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVHLTPL 324
>gi|168701031|ref|ZP_02733308.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 389
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 35/321 (10%)
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPN 229
G TD L+ L + L L+L +QV++ + FP+L+ LN+++T +T L
Sbjct: 50 GAKTFTDAGLKELSLFAGLTNLNLTNTQVTDAALKDVARFPKLTVLNVSYTQITDEGLRE 109
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
I+ L L++ +D K+S +G + A + T L V+++
Sbjct: 110 IAGLT--ELTDLVLD-----------YTKVSGSG---LKHLAALTKLRTLSLGSKIVTDA 153
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
L L ++ L LDL + + D ++ +A + + L+ L L N + G+ LA
Sbjct: 154 GLRG---LVGVRGLRQLDLRETSVTDAGLKEIAPL-SELKTLMLVNAPVTGPGLKDLA-L 208
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L L+ L LSGT+I +S ++ + SL+ +++ T + TD L L
Sbjct: 209 LTKLQFLFLSGTRITGDGLSELTGLKSLRLLELGGTPL----------TDA--GLKQLAG 256
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
+ L L L T+V+ A L L+ K+L L L + +TD L ++++L+ LT L++RD
Sbjct: 257 FDTLGHLGLSNTKVTGAGLKELAALKQLSGLDLGSTKITDADLKEIAALTNLTGLTMRDT 316
Query: 470 VLTNSGLGSFKPPRSLKLLDL 490
+T++G+ + P L+ L+L
Sbjct: 317 PVTDAGVRNLAPLTKLRRLNL 337
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 159/377 (42%), Gaps = 65/377 (17%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
+DLS TDAG+K L + L L L+ T +T + ++ L+VL++ +TD
Sbjct: 46 VDLSGAKTFTDAGLKELSLFAGLTNLNLTNTQVTDAALKDVARFPKLTVLNVSYTQITDE 105
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLE 234
LR + LT+L L L ++VS G L +L L+L G+ L + L
Sbjct: 106 GLREIAGLTELTDLVLDYTKVSGSGLKHLAALTKLRTLSLGSKIVTDAGLRGLVGVRGLR 165
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 294
L+L ++ G + APL++ ++T +L V+ L
Sbjct: 166 QLDLRETSVTD--AGLKEIAPLSE-----------------LKTLMLVNAPVTGPGLKDL 206
Query: 295 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
LT+ L+ L LS TR + G+ L G L +L
Sbjct: 207 ALLTK----------------------------LQFLFLSGTRITGDGLSELTG-LKSLR 237
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 414
+L L GT + D + ++ +L + +SNT + G L L L L
Sbjct: 238 LLELGGTPLTDAGLKQLAGFDTLGHLGLSNTKVTGA------------GLKELAALKQLS 285
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
L+L T+++DA L ++ L L++R+ +TD + L+ L+KL L++ +TN+
Sbjct: 286 GLDLGSTKITDADLKEIAALTNLTGLTMRDTPVTDAGVRNLAPLTKLRRLNLTHTKVTNA 345
Query: 475 GLGSFKPPRSLKLLDLH 491
+ + L +DLH
Sbjct: 346 CAKTLATFKHLTSVDLH 362
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 33/211 (15%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V + +L A LR+L++ + VT + L L G+ L++LDL R VTDAG+K +
Sbjct: 126 VSGSGLKHLAALTKLRTLSLG-SKIVTDAGLRGLVGVRGLRQLDL-RETSVTDAGLKEIA 183
Query: 138 SISTLEKL------------------------WLSETGLTADGIALLSSLQNLSVLDLGG 173
+S L+ L +LS T +T DG++ L+ L++L +L+LGG
Sbjct: 184 PLSELKTLMLVNAPVTGPGLKDLALLTKLQFLFLSGTRITGDGLSELTGLKSLRLLELGG 243
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNIS 231
P+TD L+ L L +L L ++V+ G L +LS L+L T +T L I+
Sbjct: 244 TPLTDAGLKQLAGFDTLGHLGLSNTKVTGAGLKELAALKQLSGLDLGSTKITDADLKEIA 303
Query: 232 SLECLNLSNCTI-DSIL--EGNENKAPLAKI 259
+L NL+ T+ D+ + G N APL K+
Sbjct: 304 ALT--NLTGLTMRDTPVTDAGVRNLAPLTKL 332
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 140/306 (45%), Gaps = 35/306 (11%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
F L LNV+ ++T L + G+T L +L L KV+ +G+KHL +++ L L L
Sbjct: 89 FPKLTVLNVS-YTQITDEGLREIAGLTELTDLVLD-YTKVSGSGLKHLAALTKLRTLSLG 146
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+T G+ L ++ L LDL VTD L+ + L++L+ L L + V+ G L
Sbjct: 147 SKIVTDAGLRGLVGVRGLRQLDLRETSVTDAGLKEIAPLSELKTLMLVNAPVTGPGLKDL 206
Query: 209 KMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 263
+ +L FL L+ T G+++L + SL L L PL L
Sbjct: 207 ALLTKLQFLFLSGTRITGDGLSELTGLKSLRLLELGGT-------------PLTDAGL-- 251
Query: 264 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMV 321
+ F L L +SN+ ++ L +K L LDL S+ I D ++ +
Sbjct: 252 ----KQLAGF-----DTLGHLGLSNTKVTGAGLKELAALKQLSGLDLGSTKITDADLKEI 302
Query: 322 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 381
A + NL L + +T + AGV LA L L L+L+ T++ + ++ L +D
Sbjct: 303 AAL-TNLTGLTMRDTPVTDAGVRNLA-PLTKLRRLNLTHTKVTNACAKTLATFKHLTSVD 360
Query: 382 ISNTDI 387
+ TD+
Sbjct: 361 LHQTDV 366
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ + ++ L + LR L + +T + L L G L L LS KVT AG+K L
Sbjct: 222 ITGDGLSELTGLKSLRLLELGGTP-LTDAGLKQLAGFDTLGHLGLSNT-KVTGAGLKELA 279
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L T +T + +++L NL+ L + PVTD +R+L LTKL L+L
Sbjct: 280 ALKQLSGLDLGSTKITDADLKEIAALTNLTGLTMRDTPVTDAGVRNLAPLTKLRRLNLTH 339
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
++V+N A L F L+ ++L T VT+
Sbjct: 340 TKVTNACAKTLATFKHLTSVDLHQTDVTE 368
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
ET+ + F++ S + FL+ A+ +DLS + D+ + A L NLNL+NT
Sbjct: 22 ETAAVQFVEKSGGRV----FLSD-GAVTGVDLSGAKTFTDAGLKELSLFAGLTNLNLTNT 76
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 396
+ + A + +A P L +L++S TQI D + ++ + L + + T + G
Sbjct: 77 QVTDAALKDVA-RFPKLTVLNVSYTQITDEGLREIAGLTELTDLVLDYTKVSGS------ 129
Query: 397 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 456
L L L L L+L V+DA L L + L L LR S+TD L +++
Sbjct: 130 ------GLKHLAALTKLRTLSLGSKIVTDAGLRGLVGVRGLRQLDLRETSVTDAGLKEIA 183
Query: 457 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
LS+L L + +A +T GL L+ L L G
Sbjct: 184 PLSELKTLMLVNAPVTGPGLKDLALLTKLQFLFLSG 219
>gi|317420071|emb|CBN82107.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 889
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 206/454 (45%), Gaps = 70/454 (15%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYLGAFRY 91
SL L LA+ LL H+ R RL+ P LE+F + L E + L AF
Sbjct: 462 SLACLTPELAELLLNHMSRERLLRPRTLELFFGCPLQKFVLNCYPYSTNELLRQLRAFTA 521
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+ L++ + +T S L + + L+ L+L+ C K+TD+ ++H+ + +L L L +T
Sbjct: 522 LKHLSLVNSPLITDSGLSIFSSLAKLQYLNLASCSKLTDSCLQHITGLKSLCFLSLDQTK 581
Query: 152 LTADGIALL--SSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVL 208
+T G+ L S+ LS L L VT+ L L + +L L + ++V + A L
Sbjct: 582 VTDAGMVLYLQSAPSCLSQLSLNQTAVTEASLVVLPTCVPQLRLLSIKQTKVKDVSA--L 639
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLN----LSNCTIDSILEGNENKA-------PLA 257
L LNL TGVT+ SSLE L+ LS+ ++ I + N+A L
Sbjct: 640 ARLSNLQTLNLDVTGVTE----SSLEHLSSHPTLSSLSLAGIPVADGNQALQIISDLRLT 695
Query: 258 KISLAGTTFINEREAFLYIETSLL------SFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
+++L G + + SLL + V++ +S+ +T++K L LS++
Sbjct: 696 QLTLPGRHTVTDSGLSFLSRLSLLLELDLTDYTQVTDQGVSQLSTMTRLK---KLSLSNT 752
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
+ D + + + L+ L L T +S GV L LP+L++L L+ TQ+ D +
Sbjct: 753 QVTDAGLPSLRGL-QELQELCLDRTAVTSRGVADLITCLPHLQVLGLASTQVGDTVVR-- 809
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
+G I+ N L +LNL +T+++D L L
Sbjct: 810 ----------------RGVIR-----------------CNQLVKLNLSRTRITDHGLKCL 836
Query: 432 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
+ +HL+ N T VSL +++L TN+S
Sbjct: 837 ----KHMHLAQVNLDGTGVSLIGIANLLSFTNIS 866
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 131/317 (41%), Gaps = 57/317 (17%)
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
T+ +LR L+ T L++L L S +++ G ++ +L +LNLA C
Sbjct: 509 TNELLRQLRAFTALKHLSLVNSPLITDSGLSIFSSLAKLQYLNLA-------------SC 555
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
L+ DS L+ L +SL T + + LY++++
Sbjct: 556 SKLT----DSCLQHITGLKSLCFLSL-DQTKVTDAGMVLYLQSA---------------- 594
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
L L L+ + + + S+ ++ LR L++ T+ V LA L NL+
Sbjct: 595 ----PSCLSQLSLNQTAVTEASLVVLPTCVPQLRLLSIKQTKVKD--VSALA-RLSNLQT 647
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL-- 413
L+L T + + ++ ++S P+L + ++ + Q + +DL L+ L + +
Sbjct: 648 LNLDVTGVTESSLEHLSSHPTLSSLSLAGIPVADGNQALQIISDLRLTQLTLPGRHTVTD 707
Query: 414 -------------ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
E + TQV+D + LST L LSL N +TD L L L +
Sbjct: 708 SGLSFLSRLSLLLELDLTDYTQVTDQGVSQLSTMTRLKKLSLSNTQVTDAGLPSLRGLQE 767
Query: 461 LTNLSIRDAVLTNSGLG 477
L L + +T+ G+
Sbjct: 768 LQELCLDRTAVTSRGVA 784
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVT-----DLV 180
+VTD G+ L +++ L+KL LS T +T G+ L LQ L L L VT DL+
Sbjct: 728 TQVTDQGVSQLSTMTRLKKLSLSNTQVTDAGLPSLRGLQELQELCLDRTAVTSRGVADLI 787
Query: 181 --LRSLQVL-------------------TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L LQVL +L L+L +++++ G LK L+ +NL
Sbjct: 788 TCLPHLQVLGLASTQVGDTVVRRGVIRCNQLVKLNLSRTRITDHGLKCLKHM-HLAQVNL 846
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
TGV+ L I++L LS I SI N P ++S
Sbjct: 847 DGTGVS-LIGIANL----LSFTNISSIRASNTRTVPPDEVS 882
>gi|348682865|gb|EGZ22681.1| hypothetical protein PHYSODRAFT_491927 [Phytophthora sojae]
Length = 648
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 189/425 (44%), Gaps = 45/425 (10%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
A +G + E + L L +LN++ C V +L AL+ + L L L C K+
Sbjct: 230 AASFQGCTGLTKESIEMLRFSTKLAALNLSGCVNVDDKSLKALSELEQLTSLQLVGCRKL 289
Query: 129 TDAGMKHLLSISTLEKLWLSE----TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
TD G+K+L ++ LEKL ++ T + A++ L LD+ +++ L+ +
Sbjct: 290 TDKGVKYLAKMAKLEKLRIARCRKLTDAALEDFAMM--FPKLRELDVANCRLSEKALQYI 347
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT-I 243
+ LE L + G Q ++ G++ L +++L+ + +C+ I
Sbjct: 348 GQIKSLEVLVIRGCQ------------------DICDDGMSSLSGLANLKYFDARHCSKI 389
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMK 301
SI + ++ L G T E +A + + L L++ + + F F++++
Sbjct: 390 HSI----PTEWTQLEVLLLGYTAFAESDAAVLQYLTNLHELELRKCRIMKRGFQFISRLT 445
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
LE L+L + + D + + +L+ LN+SNT S G LA L L IL L
Sbjct: 446 HLERLELGETALTDSGLLEICNSAKSLKALNISNTEISDNGAAGLA-KLKELRILRLDTP 504
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTA----------LQN 409
I + A++ +S + L+ +D+ +I G + V LS+ +
Sbjct: 505 GITNRALANLSFLARLERLDLFGANITDNGLMHLVPLHKLQELSICGGNIGDRGVGLISK 564
Query: 410 LNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
L L LNL Q + + +LF L L L+L N ++ +SL LSSL +L +LS+
Sbjct: 565 LTSLTSLNLSQNRNIRTKSLFYLRALTGLRCLNLSNTGISALSLRHLSSLKELQSLSVYG 624
Query: 469 AVLTN 473
L+
Sbjct: 625 CSLSQ 629
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 170/413 (41%), Gaps = 86/413 (20%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE----TGLTADGIALLSSLQNLS 167
T + LK +D+S C+ + G + + + L +L + TGLT + I +L L+
Sbjct: 195 TTLQQLKSIDVSGCIHLHQLGAEWGYATTKLPELLAASFQGCTGLTKESIEMLRFSTKLA 254
Query: 168 VLDLGG-LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
L+L G + V D L++L L +L L L G + L GV
Sbjct: 255 ALNLSGCVNVDDKSLKALSELEQLTSLQLVGCR------------------KLTDKGVKY 296
Query: 227 LPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
L ++ LE L ++ C D+ LE F RE L
Sbjct: 297 LAKMAKLEKLRIARCRKLTDAALED------------FAMMFPKLRE------------L 332
Query: 285 DVSNSSLSR--FCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLN--------- 332
DV+N LS ++ Q+K+LE L + I DD + ++ + ANL+ +
Sbjct: 333 DVANCRLSEKALQYIGQIKSLEVLVIRGCQDICDDGMSSLSGL-ANLKYFDARHCSKIHS 391
Query: 333 ------------LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
L T F+ + +L +L NL L L +I ++S + L+ +
Sbjct: 392 IPTEWTQLEVLLLGYTAFAESDAAVLQ-YLTNLHELELRKCRIMKRGFQFISRLTHLERL 450
Query: 381 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
++ T A TD L L + L+ LN+ T++SD L+ KEL L
Sbjct: 451 ELGET----------ALTDSGL-LEICNSAKSLKALNISNTEISDNGAAGLAKLKELRIL 499
Query: 441 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
L +T+ +L LS L++L L + A +T++GL P L+ L + GG
Sbjct: 500 RLDTPGITNRALANLSFLARLERLDLFGANITDNGLMHLVPLHKLQELSICGG 552
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +ELR + + ++ +L L + + S L LK L++S
Sbjct: 422 NLHELELR-KCRIMKRGFQFISRLTHLERLELGETALTDSGLLEICNSAKSLKALNISN- 479
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+++D G L + L L L G+T +A LS L L LDL G +TD L L
Sbjct: 480 TEISDNGAAGLAKLKELRILRLDTPGITNRALANLSFLARLERLDLFGANITDNGLMHLV 539
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLS 239
L KL+ L + G + +RG ++ L+ LNL+ + L ++ L CLNLS
Sbjct: 540 PLHKLQELSICGGNIGDRGVGLISKLTSLTSLNLSQNRNIRTKSLFYLRALTGLRCLNLS 599
Query: 240 NCTIDSI 246
N I ++
Sbjct: 600 NTGISAL 606
>gi|46445833|ref|YP_007198.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399474|emb|CAF22923.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 337
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 124/248 (50%), Gaps = 28/248 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L + L+ LN++ C +T + L LT +T L+ L+LS C K+T AG+ HL + L
Sbjct: 22 LAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSVCGKLTGAGLAHLTPLVAL 81
Query: 143 EKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWG-SQ 199
E L LS+ G LT G+A L+ L L L + G +TD+ L L+ L L++LDL G S
Sbjct: 82 ENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDVGLAHLRPLVALQHLDLDGCSN 141
Query: 200 VSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+++ G A L+ L LNL G+ L + +L+ L+L C N
Sbjct: 142 LTDAGLAHLRPLVALQHLNLKRCDNLTDIGLAHLRPLVALQHLDLDGCN-------NLTD 194
Query: 254 APLAKIS-LAGTTFINEREAFLYIETSL-----------LSFLDVSNSSLSRFCFLTQMK 301
A LA ++ L +N R F + + L L+ D SN + + L +
Sbjct: 195 AGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSNLTDAGLAHLKSLV 254
Query: 302 ALEHLDLS 309
AL+HL+LS
Sbjct: 255 ALQHLNLS 262
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + +RG + +A+L L+ L++ C +T + L L + L+ L+L RC
Sbjct: 107 QHLGMRGCRKLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDN 166
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQ 185
+TD G+ HL + L+ L L LT G+A L+ L L L+L G TD L L
Sbjct: 167 LTDIGLAHLRPLVALQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLT 226
Query: 186 VLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNL 238
L L+YL+L S +++ G A LK L LNL+W G+ L + +LE L+L
Sbjct: 227 PLVALQYLNLSDCSNLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDL 286
Query: 239 SNC 241
S C
Sbjct: 287 SQC 289
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G N++ +A+L L+ LN+ C + T + L LT + L+ L+LS C
Sbjct: 182 QHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSN 241
Query: 128 VTDAGMKHLLSISTLEKL---WLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRS 183
+TDAG+ HL S+ L+ L W S+ LT G+A L+ L L LDL +TD L
Sbjct: 242 LTDAGLAHLKSLVALQHLNLSWCSK--LTGAGLAHLTPLVALEDLDLSQCGKLTDAGLAH 299
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNL 219
L +LT L+YL+L ++++ G A K +LNL
Sbjct: 300 LALLTALQYLNLERCRKLTDAGLAHFKTLAASIYLNL 336
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 66/314 (21%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSN 240
L L++L+L ++++ G A LK L LNL+W TG+ L +++L+ LNLS
Sbjct: 4 LVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSV 63
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C K++ AG + A ++ S L +++ L+ LT +
Sbjct: 64 C---------------GKLTGAGLAHLTPLVALENLDLSQCGKL--TDAGLAH---LTPL 103
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
AL+HL M C L ++ L++ R A L+ L L G
Sbjct: 104 VALQHLG------------MRGC--RKLTDVGLAHLRPLVA-----------LQHLDLDG 138
Query: 361 -TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
+ + D ++++ + +L+ +++ D + +G L L+ L L+ L+L+
Sbjct: 139 CSNLTDAGLAHLRPLVALQHLNLKRCD---NLTDIG--------LAHLRPLVALQHLDLD 187
Query: 420 Q-TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 476
++DA L L+ L HL+LR TD L L+ L L L++ D LT++GL
Sbjct: 188 GCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSNLTDAGL 247
Query: 477 GSFKPPRSLKLLDL 490
K +L+ L+L
Sbjct: 248 AHLKSLVALQHLNL 261
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 143/336 (42%), Gaps = 67/336 (19%)
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA---- 220
L L+LG +TD L L+ L L++L+L W +++ G A L L LNL+
Sbjct: 7 LQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSVCGK 66
Query: 221 --WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
G+ L + +LE L+LS C K++ AG + A ++
Sbjct: 67 LTGAGLAHLTPLVALENLDLSQC---------------GKLTDAGLAHLTPLVALQHL-- 109
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
+ +++ L+ L + AL+HLDL +NL + L++ R
Sbjct: 110 GMRGCRKLTDVGLAH---LRPLVALQHLDLDGC--------------SNLTDAGLAHLRP 152
Query: 339 SSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
A L+ L+L + D ++++ + +L+ +D+ + + G
Sbjct: 153 LVA-----------LQHLNLKRCDNLTDIGLAHLRPLVALQHLDLDGCN---NLTDAG-- 196
Query: 398 TDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQL 455
L L L L+ LNL + +DA L L+ L +L+L + S LTD L L
Sbjct: 197 ------LAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSNLTDAGLAHL 250
Query: 456 SSLSKLTNLSIR-DAVLTNSGLGSFKPPRSLKLLDL 490
SL L +L++ + LT +GL P +L+ LDL
Sbjct: 251 KSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDL 286
>gi|443729605|gb|ELU15470.1| hypothetical protein CAPTEDRAFT_224593 [Capitella teleta]
Length = 858
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 189/412 (45%), Gaps = 55/412 (13%)
Query: 28 RRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYL 86
R+ +SL LPA++A+ LL+ L++ +L+ P L F + + + L E + +
Sbjct: 435 RQPIQSLHGLPANVAEGLLKQLMKEKLLRPKTLHPFIPSHLQTLLLDYYPYATNELLHEI 494
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
L L++ C +T L ++ + LK L+L+ C ++TD
Sbjct: 495 RLHNCLAHLSLKACSLITDRGLQDISSLKRLKVLNLAACTQLTD---------------- 538
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL--QVLTKLEYLDLWGSQVSNRG 204
+ + L+ L NL VL L V+D ++ L Q LT L LDL +QV++R
Sbjct: 539 --------NCLPLVRELPNLQVLILESTGVSDRGMQELFHQPLTSLVNLDLSKTQVTHRI 590
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISS--LECLNLSNCTI--DSI--LEGNENKAPLAK 258
+ K P+LS LNL + V L + L+ LNLS+ I DS+ L G + +A
Sbjct: 591 FNLAKNAPKLSHLNLEQSEVASLSGVKELCLQSLNLSHTKIVTDSLLCLSGCDIRA---- 646
Query: 259 ISLAGTTFINEREAFLYIET-SLLSFLDVSNSSLSR---FCFLTQMKALEHLDLSSSM-I 313
++++ T I Y+++ LL L + + F T M L LDL++ + +
Sbjct: 647 LNISNTPNIEGDLGLEYLQSLKLLQHLSLPSRLSLSDHGLQFTTAM-PLVLLDLTNYLNV 705
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
GDD + + + +LR L L NT+ + G+ L G L NLE +SL T I D +
Sbjct: 706 GDDGMRHIGKI-TSLRRLLLCNTKITDGGLLFLRG-LVNLEEISLDRTAITDEGACVVEA 763
Query: 374 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
L+ + ++ T I ++ L +L L +LNL +T +SD
Sbjct: 764 FTRLQQLSLTETGI----------SNAFLEHQSLNPCYLLSKLNLSRTAISD 805
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ YL + + L+ L++ ++ L T M L LDL+ + V D GM+H+ I++L
Sbjct: 661 LEYLQSLKLLQHLSLPSRLSLSDHGLQFTTAMP-LVLLDLTNYLNVGDDGMRHIGKITSL 719
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+L L T +T G+ L L NL + L +TD ++ T+L+ L L + +SN
Sbjct: 720 RRLLLCNTKITDGGLLFLRGLVNLEEISLDRTAITDEGACVVEAFTRLQQLSLTETGISN 779
Query: 203 RGAAVLKMFP--RLSFLNLAWTGVTKLPNISSLECLNLSNCTI 243
+ P LS LNL+ T ++ + CL L N T+
Sbjct: 780 AFLEHQSLNPCYLLSKLNLSRTAISD----KGVRCLRLPNLTL 818
>gi|46446912|ref|YP_008277.1| hypothetical protein pc1278 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400553|emb|CAF24002.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 731
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 141/291 (48%), Gaps = 23/291 (7%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L LR LN+ C ++T++ L L + L+ LDLS C +TDAG+ HL + L
Sbjct: 390 LAHLTPLVALRHLNLMGCNKLTNAGLMHLRPLMALQHLDLSCCRNLTDAGLAHLAPLVAL 449
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDL-WGSQ 199
+ L LSE T LT G+A L L NL L+L +TD L L L L++LDL
Sbjct: 450 QHLCLSECTNLTGAGLAHLKPLVNLQHLNLNSCYKLTDAGLAHLTPLMALQHLDLSCCRN 509
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCT--IDSILEGNE 251
+++ G A L+ L L N G+T L + +L+ LNLS C D+ L
Sbjct: 510 LTDAGLAHLRPLVALQHLDLNCCKNFTDAGLTHLTPLVALQHLNLSCCRNLTDAGLAYLM 569
Query: 252 NKAPLAKISLAGT-TFINEREAFLYIETSL--LSFLDVSNSSLSRFCFLTQMKALEHLDL 308
L+ ++LAG F + A L +L L+ D + + LT + AL+HLDL
Sbjct: 570 PLVALSHLNLAGCHNFTDAGLAHLAPLVALQHLNLGDCYRLTNAGLEHLTPLVALQHLDL 629
Query: 309 SSSMIGDDS--VEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEIL 356
S D+ +V V L +L+LS + + AG+ HL LE L
Sbjct: 630 SECEKLTDAGLTHLVPLVA--LTHLDLSECDKLTDAGL----AHLTPLEAL 674
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 207/475 (43%), Gaps = 71/475 (14%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L+ F + E + S+ + L + L++L++ +C ++T + L L +
Sbjct: 313 FEKILKHFSNEIERLNFSKNASLTDAHLLALKNCKNLKALHLQECYKLTDTGLVYLAPLV 372
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 174
L+ L+L C+K+TDAG+ HL + L L L LT G+ L L L LDL
Sbjct: 373 SLQYLNLFDCIKLTDAGLAHLTPLVALRHLNLMGCNKLTNAGLMHLRPLMALQHLDLSCC 432
Query: 175 -PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
+TD L L L L++L L S+ + NL G+ L + +L
Sbjct: 433 RNLTDAGLAHLAPLVALQHLCL--SECT----------------NLTGAGLAHLKPLVNL 474
Query: 234 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
+ LNL++C K++ AG + A +++ S +++++ L+
Sbjct: 475 QHLNLNSCY---------------KLTDAGLAHLTPLMALQHLDLSCCR--NLTDAGLAH 517
Query: 294 FCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTR-FSSAGVGILAGHL 350
L + AL+HLDL+ D+ + V L++LNLS R + AG+ L L
Sbjct: 518 ---LRPLVALQHLDLNCCKNFTDAGLTHLTPLVA--LQHLNLSCCRNLTDAGLAYLMP-L 571
Query: 351 PNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L L+L+G D +++++ + +L+ +++ + + G E LT L
Sbjct: 572 VALSHLNLAGCHNFTDAGLAHLAPLVALQHLNLGDC---YRLTNAGLE-----HLTPLVA 623
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR- 467
L HL+ E +++DA L L L HL L LTD L L+ L L +L++
Sbjct: 624 LQHLDLSECE--KLTDAGLTHLVPLVALTHLDLSECDKLTDAGLAHLTPLEALQHLNLNW 681
Query: 468 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICP 522
LT++GL P L +D L +CK + + H S + P
Sbjct: 682 CDKLTDAGLAHLTP------------LLALQDLYLGYCKNFTEVGLAHFKSSVAP 724
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL S R+L L + L H + L G ++ +A+L L+ LN+ D
Sbjct: 551 HLNLSCCRNLTDAGLAYLMPLVALSH----LNLAGCHNFTDAGLAHLAPLVALQHLNLGD 606
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIA 158
C R+T++ L LT + L+ LDLS C K+TDAG+ HL+ + L L LSE LT G+A
Sbjct: 607 CYRLTNAGLEHLTPLVALQHLDLSECEKLTDAGLTHLVPLVALTHLDLSECDKLTDAGLA 666
Query: 159 LLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
L+ L+ L L+L +TD L L L L+ DL+ N L F
Sbjct: 667 HLTPLEALQHLNLNWCDKLTDAGLAHLTPLLALQ--DLYLGYCKNFTEVGLAHF 718
>gi|46446627|ref|YP_007992.1| hypothetical protein pc0993 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400268|emb|CAF23717.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 478
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
LRG + V +A+L + R L+ L+++ CR +T + L LT +T L+ L L +C +T A
Sbjct: 282 LRGCDKVTDAGLAHLTSLRALQYLDLSFCRNITDAGLAHLTPLTALQRLLLKKCENLTGA 341
Query: 132 GMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTK 189
G+ HL + L+ L LS LT DG+A L L L LDL +TD L L L
Sbjct: 342 GLAHLTPLKALQYLDLSYWDNLTDDGLAHLRPLVALQHLDLANCYELTDAGLAHLTPLVA 401
Query: 190 LEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNC 241
L +L L W ++++ G A L+ L LNL+ G+ L +++L+ LNLS+C
Sbjct: 402 LTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTALQYLNLSDC 460
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 17/213 (7%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ +A+L + L+ L + C +VT + L LT + L+ LDLS C +TDAG+ HL ++
Sbjct: 266 DGLAHLASLTALQHLGLRGCDKVTDAGLAHLTSLRALQYLDLSFCRNITDAGLAHLTPLT 325
Query: 141 TLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGS 198
L++L L + LT G+A L+ L+ L LDL +TD L L+ L L++LDL
Sbjct: 326 ALQRLLLKKCENLTGAGLAHLTPLKALQYLDLSYWDNLTDDGLAHLRPLVALQHLDLANC 385
Query: 199 -QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNE 251
++++ G A L L+ L L W G+ L + +L+ LNLS+C N
Sbjct: 386 YELTDAGLAHLTPLVALTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCR-------NL 438
Query: 252 NKAPLAK-ISLAGTTFINEREAFLYIETSLLSF 283
A LA I L ++N + +T L SF
Sbjct: 439 TDAGLAHLIPLTALQYLNLSDCRKLTDTGLASF 471
>gi|46447197|ref|YP_008562.1| hypothetical protein pc1563 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400838|emb|CAF24287.1| hypothetical protein pc1563 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 380
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 116/225 (51%), Gaps = 12/225 (5%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLI---FPSLLEVFKHNAEAIELRGENSVDAEWMAYL 86
Q+ L L +L +++ L+++ F +L F + E + + S+ + L
Sbjct: 121 QQYQLNALKNYLELTVVSSLLKQAFYLTKFEKILNHFSNEIEGLNFSEKYSLTDTHLLAL 180
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ L+ L++ DC +T + L L + L+ L+L+ C K+TDAG+ HL + L+ L
Sbjct: 181 KNCKNLKELHLQDCYMLTDAGLAHLASLVALQHLNLAGCRKLTDAGLAHLTPLVVLQYLS 240
Query: 147 LSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNR 203
L+ LT G+A L+ L L LDL G P +T + L L+ L L++L+L W ++++
Sbjct: 241 LAGCDNLTDAGLAHLTPLVALQHLDLNGCPNLTGVGLAHLKPLVALQHLNLSWCDKLTDA 300
Query: 204 GAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCT 242
G A LK L +LNLA G+ L + +L+ L+L+ C+
Sbjct: 301 GLAHLKPLVALHYLNLAGCDKLTDAGLVHLMPLVTLQHLDLTACS 345
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L LN+A C ++T + L L + L+ LDL+ C +TD G+ HL + L
Sbjct: 302 LAHLKPLVALHYLNLAGCDKLTDAGLVHLMPLVTLQHLDLTACSNLTDVGLAHLKPLVAL 361
Query: 143 EKLWLSET-GLTADGIA 158
+ L L LT G+A
Sbjct: 362 QHLNLGWCPNLTDAGLA 378
>gi|46447300|ref|YP_008665.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400941|emb|CAF24390.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 518
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 152/323 (47%), Gaps = 59/323 (18%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L+ +++ +++L L+ LN++ C ++T + L LT + L+ LDLS+C
Sbjct: 210 NLKVLYLQECHNLTDAGLSHLAPLVTLQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLSKC 269
Query: 126 VKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRS 183
+TDAG+ HL ++ L+ L LS + LT G+A L+SL L LDL + +TD+ L
Sbjct: 270 YNLTDAGLTHLTPLAALQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLTWCVNLTDVGLAH 329
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L L L++L+L + ++++ G A L L L+L W G+ L + +L+ L
Sbjct: 330 LTPLAALQHLNLSYCIKLTDVGLAHLTSLVALQHLDLTWCVNLTEVGLAHLTPLVTLQHL 389
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
LS C ++ AG + A ++ S+ +++ L+
Sbjct: 390 ELSKC---------------HNLTDAGLAHLTSLVALQHLNLSICK--KITDVGLAH--- 429
Query: 297 LTQMKALEHLDLS-------------SSMIGDDSVEMVACVGAN------------LRNL 331
LT + AL+HLDLS ++++ +++ CV L++L
Sbjct: 430 LTPLVALQHLDLSGCDKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHL 489
Query: 332 NLSN-TRFSSAGVGILAGHLPNL 353
NLS T + AG+ H NL
Sbjct: 490 NLSYCTNLTDAGL----AHFKNL 508
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 172/418 (41%), Gaps = 103/418 (24%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ +LN ++ + + L L LK L L C +TDAG+ HL + TL+ L LS
Sbjct: 186 IEALNFSENTYLIDAHLLTLKNCKNLKVLYLQECHNLTDAGLSHLAPLVTLQHLNLSYCS 245
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+TD L L L L++LDL
Sbjct: 246 -----------------------KLTDAGLAHLTSLVTLQHLDLSKCY------------ 270
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
NL G+T L +++L+ LNLS C +K++ AG
Sbjct: 271 ------NLTDAGLTHLTPLAALQHLNLSYC---------------SKLTDAG-------- 301
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRN 330
LT + L+HLDL+ + + D + + + A L++
Sbjct: 302 ----------------------LAHLTSLVTLQHLDLTWCVNLTDVGLAHLTPLAA-LQH 338
Query: 331 LNLSNT-RFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIK 388
LNLS + + G+ L L L+ L L+ + + +++++ + +L+ +++S
Sbjct: 339 LNLSYCIKLTDVGLAHLTS-LVALQHLDLTWCVNLTEVGLAHLTPLVTLQHLELSKCH-- 395
Query: 389 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SL 447
A + SL ALQ+LN L++ + +++D L L+ L HL L L
Sbjct: 396 ---NLTDAGLAHLTSLVALQHLN----LSICK-KITDVGLAHLTPLVALQHLDLSGCDKL 447
Query: 448 TDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
TDV L L++L L +L + V LT++GL KP +L+ L+L LT+ + F
Sbjct: 448 TDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCTNLTDAGLAHF 505
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G + + +A+L L+ L++ C +T + L L + L+ L+LS C
Sbjct: 437 QHLDLSGCDKLTDVGLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCTN 496
Query: 128 VTDAGMKHLLSISTLEKLWLS 148
+TDAG+ H +++T L LS
Sbjct: 497 LTDAGLAHFKNLTTSLNLKLS 517
>gi|283780172|ref|YP_003370927.1| hypothetical protein Psta_2397 [Pirellula staleyi DSM 6068]
gi|283438625|gb|ADB17067.1| leucine-rich repeat cysteine-containing subtype [Pirellula staleyi
DSM 6068]
Length = 443
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 40/369 (10%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
V+ +D +KHL + +L +L + G+T G+A L L +L L VTD + L
Sbjct: 81 VEGSDENLKHLKGLPSLTRLEANVRGVTDAGLANLDGHPTLRILVLELSSVTDAGMEHLT 140
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-----VTKLPNISSLECLNLSN 240
L LE + L ++++G L L + T + + ++S LE L+L +
Sbjct: 141 KLPALEDIQLKRCDLTSKGYESLAKIKTLRRIRAPQTNFNDDCLAAIKDMSQLELLDLQD 200
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C +A LA LAG T + + +Y T ++++ + ++
Sbjct: 201 CN-------QVTEAGLA--PLAGMTKL--KSLRIYGPT-------ITDTVMG---YIKDC 239
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLS 359
K L L L S +G D ++++ + + L+ L L + + + +AG L +LEIL L
Sbjct: 240 KNLASLSLEQSAVGVDGMKVIGGL-SKLKELKLYGASNVTDDALAQIAG-LKDLEILELR 297
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
T + +++ M LK +D+S T I G L AL L +LE +NL
Sbjct: 298 STTTTSKGMVHLAGMSKLKLLDLSET---ANIDNAG--------LAALAPLTNLEEINLW 346
Query: 420 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
T V DA L PL+ +L L+L +TD L L LS L L I +T++GL
Sbjct: 347 YTFVDDAGLAPLAGMTKLKRLNLDKCQVTDAGLVHLKGLSNLEFLHIGSTRVTDTGLAEL 406
Query: 480 KPPRSLKLL 488
+ ++LK L
Sbjct: 407 EGLKNLKHL 415
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ +A + L L++ DC +VT + L L GMT LK L + +TD M ++
Sbjct: 182 DCLAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMTKLKSLRIYGPT-ITDTVMGYIKDCK 240
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
L L L ++ + DG+ ++ L L L L G VTD L + L LE L+L +
Sbjct: 241 NLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGLKDLEILELRSTT 300
Query: 200 VSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+++G L +L L+L+ T G+ L +++LE +NL +D +
Sbjct: 301 TTSKGMVHLAGMSKLKLLDLSETANIDNAGLAALAPLTNLEEINLWYTFVD-----DAGL 355
Query: 254 APLAKIS 260
APLA ++
Sbjct: 356 APLAGMT 362
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L G ++V + +A + + L L + TS + L GM+ LK LDLS +
Sbjct: 269 LKLYGASNVTDDALAQIAGLKDLEILELRSTT-TTSKGMVHLAGMSKLKLLDLSETANID 327
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+AG+ L ++ LE++ L T + G+A L+ + L L+L VTD L L+ L+
Sbjct: 328 NAGLAALAPLTNLEEINLWYTFVDDAGLAPLAGMTKLKRLNLDKCQVTDAGLVHLKGLSN 387
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTK----LPNISSLE 234
LE+L + ++V++ G A L+ L L +++ GV K LP ++ +E
Sbjct: 388 LEFLHIGSTRVTDTGLAELEGLKNLKHLVITFCNDISDDGVAKLQAALPGLTKIE 442
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 334 SNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF 390
+N R + AG+ L GH P L IL L + + D + +++ +P+L+ I + D+ KG+
Sbjct: 102 ANVRGVTDAGLANLDGH-PTLRILVLELSSVTDAGMEHLTKLPALEDIQLKRCDLTSKGY 160
Query: 391 -------------IQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKE 436
Q D L A+++++ LE L+L+ QV++A L PL+ +
Sbjct: 161 ESLAKIKTLRRIRAPQTNFNDD---CLAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMTK 217
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 496
L L + ++TD + + L +LS+ + + G+ LK L L+G +
Sbjct: 218 LKSLRIYGPTITDTVMGYIKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNV 277
Query: 497 TEDAILQFCKM 507
T+DA+ Q +
Sbjct: 278 TDDALAQIAGL 288
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNV-------------ADCRRVTS--------- 105
E ++L+ N V +A L L+SL + DC+ + S
Sbjct: 194 ELLDLQDCNQVTEAGLAPLAGMTKLKSLRIYGPTITDTVMGYIKDCKNLASLSLEQSAVG 253
Query: 106 -SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ 164
+ + G++ LKEL L VTD + + + LE L L T T+ G+ L+ +
Sbjct: 254 VDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGLKDLEILELRSTTTTSKGMVHLAGMS 313
Query: 165 NLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL---- 219
L +LDL + + L +L LT LE ++LW + V + G A L +L LNL
Sbjct: 314 KLKLLDLSETANIDNAGLAALAPLTNLEEINLWYTFVDDAGLAPLAGMTKLKRLNLDKCQ 373
Query: 220 -AWTGVTKLPNISSLECLNLSNCTIDSI----LEGNEN 252
G+ L +S+LE L++ + + LEG +N
Sbjct: 374 VTDAGLVHLKGLSNLEFLHIGSTRVTDTGLAELEGLKN 411
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 132/309 (42%), Gaps = 57/309 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E +A + R +R A L A+ M+ L+ LDL C +VT+AG+ L ++
Sbjct: 161 ESLAKIKTLRRIR----APQTNFNDDCLAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMT 216
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQ 199
L+ L + +T + + +NL+ L L V ++ + L+KL+ L L+G S
Sbjct: 217 KLKSLRIYGPTITDTVMGYIKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASN 276
Query: 200 VSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKA 254
V++ A + L L L T G+ L +S L+ L+LS
Sbjct: 277 VTDDALAQIAGLKDLEILELRSTTTTSKGMVHLAGMSKLKLLDLS--------------- 321
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
ET+ ++ N+ L+ LT LE ++L + +
Sbjct: 322 ----------------------ETA-----NIDNAGLAALAPLTN---LEEINLWYTFVD 351
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
D + +A + L+ LNL + + AG+ L G L NLE L + T++ D ++ + +
Sbjct: 352 DAGLAPLAGM-TKLKRLNLDKCQVTDAGLVHLKG-LSNLEFLHIGSTRVTDTGLAELEGL 409
Query: 375 PSLKFIDIS 383
+LK + I+
Sbjct: 410 KNLKHLVIT 418
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
L++S+ + + LT++ ALE + L + E +A + LR + T F+
Sbjct: 125 VLELSSVTDAGMEHLTKLPALEDIQLKRCDLTSKGYESLAKI-KTLRRIRAPQTNFNDDC 183
Query: 343 VGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
+ + + LE+L L Q+ + ++ ++ M LK + I I TD V
Sbjct: 184 LAAIK-DMSQLELLDLQDCNQVTEAGLAPLAGMTKLKSLRIYGPTI----------TDTV 232
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSK 460
+ +++ +L L+LEQ+ V + + +L L L AS +TD +L Q++ L
Sbjct: 233 MGY--IKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGLKD 290
Query: 461 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L L +R T+ G+ LKLLDL
Sbjct: 291 LEILELRSTTTTSKGMVHLAGMSKLKLLDL 320
>gi|329905907|ref|ZP_08274287.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547418|gb|EGF32242.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
Length = 552
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 187/391 (47%), Gaps = 55/391 (14%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
R+L +LN+++ ++T + L +L +T LK+LDL C + D G+ HL ++++L +L +
Sbjct: 35 IRHLTNLNLSNNSKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNMASLTQLNVR 94
Query: 149 E-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGA 205
+ T +T G+ L++L L+ L+L G +T + L+ L L YLDL G S +SN
Sbjct: 95 QCTNITDAGLEQLANLPRLARLNLAGCHRITAAGIAHLKKL-PLTYLDLSGCSGISNAAI 153
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA-----PLAKIS 260
A LK L LNLS+CT G+E A PL +
Sbjct: 154 AHLKAH--------------------QLTELNLSDCTG----FGDEGFAHLAEVPLQTLD 189
Query: 261 LAGTT-FINEREAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 318
L+G T F N FL T + LS + + L ++L HLDL+ G D+
Sbjct: 190 LSGCTGFTNSGLRFLNKSTLTRLSLRNCTQLDFGATFRLYGAQSLRHLDLAGCE-GLDNT 248
Query: 319 EMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPS 376
+ A L +L+L+ NT + G+ LA + +L L+LS G + D A+++++ +P+
Sbjct: 249 ALTALQDLPLEHLDLARNTFLNDTGLESLA-EMTSLRYLNLSGGADMTDAALAHLAELPA 307
Query: 377 LKFIDISN---TDIKGFIQ--QVGAETDLVLSLTALQNL---------NHLERLNLEQ-T 421
L+ + ++N T G Q + ET ++ AL N L++L+L T
Sbjct: 308 LQHLILNNCRRTTDAGLAQLSHLPLETLELVDCVALTNTALARLPGAAATLQKLDLSGCT 367
Query: 422 QVSDATLFPLSTFKELIHLSLR-NASLTDVS 451
+SDA L L+ L L L N + TD
Sbjct: 368 ALSDAGLAHLADITTLRKLDLSWNRNFTDAG 398
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 67/352 (19%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L L+ L++ C + + L L M L +L++ +C +TDAG++ L ++ L
Sbjct: 54 LASLAPLTALKQLDLGHCTGIGDTGLAHLGNMASLTQLNVRQCTNITDAGLEQLANLPRL 113
Query: 143 EKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQV--LTKLEYLDLWGS 198
+L L+ +TA GIA L L L+ LDL G +++ + L+ LT+L D G
Sbjct: 114 ARLNLAGCHRITAAGIAHLKKLP-LTYLDLSGCSGISNAAIAHLKAHQLTELNLSDCTG- 171
Query: 199 QVSNRGAAVLKMFPRLSFLNLAW-TGVT----KLPNISSLECLNLSNCT-ID-------- 244
+ G A L P L L+L+ TG T + N S+L L+L NCT +D
Sbjct: 172 -FGDEGFAHLAEVP-LQTLDLSGCTGFTNSGLRFLNKSTLTRLSLRNCTQLDFGATFRLY 229
Query: 245 ----------SILEGNENKA-------PLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+ EG +N A PL + LA TF+N+ E + L +L++S
Sbjct: 230 GAQSLRHLDLAGCEGLDNTALTALQDLPLEHLDLARNTFLNDTGLESLAEMTSLRYLNLS 289
Query: 288 NS---SLSRFCFLTQMKALEHLDLSS------------SMIGDDSVEMVACVGANLRNLN 332
+ + L ++ AL+HL L++ S + +++E+V CV
Sbjct: 290 GGADMTDAALAHLAELPALQHLILNNCRRTTDAGLAQLSHLPLETLELVDCVA------- 342
Query: 333 LSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L+NT + L G L+ L LSG T + D +++++ + +L+ +D+S
Sbjct: 343 LTNTALAR-----LPGAAATLQKLDLSGCTALSDAGLAHLADITTLRKLDLS 389
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N E +A + + RYL N++ +T +AL L + L+ L L+ C + TDAG+
Sbjct: 270 NDTGLESLAEMTSLRYL---NLSGGADMTDAALAHLAELPALQHLILNNCRRTTDAGLAQ 326
Query: 136 L--LSISTLEKLWLSETGLTADGIALL-SSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLE 191
L L + TLE + LT +A L + L LDL G ++D L L +T L
Sbjct: 327 LSHLPLETLE--LVDCVALTNTALARLPGAAATLQKLDLSGCTALSDAGLAHLADITTLR 384
Query: 192 YLDL-WGSQVSNRGAAVLKMFP----RLS-FLNLAWTGVTKLPNISSLECLNLSNC-TID 244
LDL W ++ GA L+ P RL+ ++ L G+T L + L+ L L C ID
Sbjct: 385 KLDLSWNRNFTDAGAVALRELPLGQLRLNGWIGLTDQGMTALSGM-PLQSLGLIGCDNID 443
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
N L K L+ +N+ +A +Y+ L LD+S
Sbjct: 444 GSGLAQLNSRCLQKFDLSHCRLLND-DAMIYLRRLPLKELDLS 485
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+++ L G +++D +A L + R L+ +++ CR + A+ L + LKELDLS C
Sbjct: 432 QSLGLIGCDNIDGSGLAQLNS-RCLQKFDLSHCRLLNDDAMIYLRRLP-LKELDLSWCGA 489
Query: 128 VTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSS--LQNLSVL 169
+TDAG+ HL + L +L L+ +G+T +G+ LS LQ L VL
Sbjct: 490 ITDAGLAHLTGLQ-LTRLDLTYNSGVTDEGLKNLSGMPLQQLRVL 533
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 47/271 (17%)
Query: 281 LSFLDVSNSSL---SRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSN- 335
L+ L++SN+S + L + AL+ LDL + IGD + + + A+L LN+
Sbjct: 38 LTNLNLSNNSKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNM-ASLTQLNVRQC 96
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTD--IKGFIQ 392
T + AG+ LA +LP L L+L+G +I I+++ +P L ++D+S I
Sbjct: 97 TNITDAGLEQLA-NLPRLARLNLAGCHRITAAGIAHLKKLP-LTYLDLSGCSGISNAAIA 154
Query: 393 QVGAE--TDLVLS-LTAL--QNLNHLERLNLEQTQVSDATLFPLSTFK-----ELIHLSL 442
+ A T+L LS T + HL + L+ +S T F S + L LSL
Sbjct: 155 HLKAHQLTELNLSDCTGFGDEGFAHLAEVPLQTLDLSGCTGFTNSGLRFLNKSTLTRLSL 214
Query: 443 RNASLTDV----------SLHQL----------SSLSKLTNLSI------RDAVLTNSGL 476
RN + D SL L ++L+ L +L + R+ L ++GL
Sbjct: 215 RNCTQLDFGATFRLYGAQSLRHLDLAGCEGLDNTALTALQDLPLEHLDLARNTFLNDTGL 274
Query: 477 GSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
S SL+ L+L GG +T+ A+ ++
Sbjct: 275 ESLAEMTSLRYLNLSGGADMTDAALAHLAEL 305
>gi|46447199|ref|YP_008564.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400840|emb|CAF24289.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1143
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 200/429 (46%), Gaps = 76/429 (17%)
Query: 3 RERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHL---ADSLLRHLIRRRLIFPSL 59
+ +E EL+ CIE S+ + QR+ L L +L A S+L + I F
Sbjct: 122 KSQELELLS-CIEDNLDELISILNFAHQRQ-LNILKNYLECAAVSVLLNQISELTEFEEF 179
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYL--------GAFRYLRSLNVADCRRVTSSALWAL 111
L +F + E G S+D AYL + L+ L + +CR T + L L
Sbjct: 180 LNLFSNEIEG----GIESLDFSNNAYLTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHL 235
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLD 170
+ + L+ LDL C K+TD+G+ +L + L+ L L+ LT DG+A LS L L LD
Sbjct: 236 SRLVALQHLDLGGCYKITDSGLTYLSRLVALQHLNLNCCVCLTDDGLAYLSHLVALQHLD 295
Query: 171 LGGL--------------------------PVTDLVLRSLQVLTKLEYLDLWG-SQVSNR 203
LG +TD L L LT L++LDL +++++
Sbjct: 296 LGECYKITDSGLAHLSSLLALQHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDS 355
Query: 204 GAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
G A L + L +LNL G++ L ++ +L+ L+L C
Sbjct: 356 GLAHLSLLVNLQYLNLNRCYNLTDRGLSHLSHLVALQYLDLGLC---------------K 400
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDD 316
K++ +G ++ A Y++ ++++ L+ L+++ AL+HL+L+ + + DD
Sbjct: 401 KLTSSGLAHLSPLVALQYLDLDRCG--EITDRGLAH---LSRLVALQHLNLNCCACLTDD 455
Query: 317 SVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 374
+ ++ + A LR+LNL +SAG+ L L L+ L+LS ++D +++++ +
Sbjct: 456 GLAYLSPLVA-LRHLNLRCCGNLTSAGLAHLTP-LIALQYLNLSYCDSLNDNGLTHLTRL 513
Query: 375 PSLKFIDIS 383
SLK +D+S
Sbjct: 514 ASLKHLDLS 522
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 110/227 (48%), Gaps = 31/227 (13%)
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TG 151
+ LN+ C +T S L L+ +T LK LDL C K+TD+G+ HL + L+ L L+
Sbjct: 907 QHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCNN 966
Query: 152 LTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLK 209
LT G+A LS L L LDLG +TD L L +L L+YL+L +++RG A L
Sbjct: 967 LTDRGLAHLSHLVALQHLDLGECYKITDSGLAHLSLLVNLQYLNLNRCDNLTDRGLAHLS 1026
Query: 210 MFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
L LNL G+ L + +L LNL +C N A LA ++ L
Sbjct: 1027 RLVTLQHLNLNCCVCLTDDGLAYLSPLVALRHLNLRSC-------DNLTSAGLAHLTPLI 1079
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
++N LS+ D N + LT++ +L+HLDLS
Sbjct: 1080 ALQYLN------------LSYCDSLND--NGLTHLTRLASLKHLDLS 1112
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 111/235 (47%), Gaps = 31/235 (13%)
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-G 151
+ LN+ C +T S L L+ +T LK LDL C K+TD+G+ HL + L+ L L+
Sbjct: 317 QHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCYN 376
Query: 152 LTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLK 209
LT G++ LS L L LDLG +T L L L L+YLDL ++++RG A L
Sbjct: 377 LTDRGLSHLSHLVALQYLDLGLCKKLTSSGLAHLSPLVALQYLDLDRCGEITDRGLAHLS 436
Query: 210 MFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
L LNL G+ L + +L LNL C GN A LA ++ L
Sbjct: 437 RLVALQHLNLNCCACLTDDGLAYLSPLVALRHLNLRCC-------GNLTSAGLAHLTPLI 489
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
++N LS+ D N + LT++ +L+HLDLS DS
Sbjct: 490 ALQYLN------------LSYCDSLND--NGLTHLTRLASLKHLDLSECPYFTDS 530
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 204/436 (46%), Gaps = 65/436 (14%)
Query: 3 RERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHL---ADSLLRHLIRRRLIFPSL 59
+ +E EL+ CIE V + R+R+ L L +L A S+L + I F
Sbjct: 687 KSQELELLS-CIEDNLDELIFVLNFARKRQ-LNILKNYLECAAVSVLLNQISELTEFEEF 744
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYL--------GAFRYLRSLNVADCRRVTSSALWAL 111
L +F + E G S+D AYL + L+ L + +CR T + L L
Sbjct: 745 LNLFSNEIEG----GIESLDFSNNAYLTDAHLLALKDCKNLKVLRLHECRNFTDAGLAHL 800
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLD 170
+ + L+ LDL C K+TD+G+ HL + L+ L L +T G+ LS L L L+
Sbjct: 801 SPLVALQHLDLGGCYKITDSGLAHLSRLVALQHLDLGGCYEITDSGLTYLSRLVALQHLN 860
Query: 171 LG-GLPVTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW----- 221
L + +TD L L L L+YLDL W ++++RG A L L LNL
Sbjct: 861 LNRCVCLTDDGLAYLSHLVALQYLDLDRCW--KITDRGLAHLSSLLALQHLNLGCCNNLT 918
Query: 222 -TGVTKLPNISSLECLNLSNCT--IDSILE----------------GNENKAPLAKIS-L 261
+G+ L +++SL+ L+L +C DS L N LA +S L
Sbjct: 919 DSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCNNLTDRGLAHLSHL 978
Query: 262 AGTTFINEREAFLYIETSL--------LSFLDVS---NSSLSRFCFLTQMKALEHLDLSS 310
++ E + ++ L L +L+++ N + L+++ L+HL+L+
Sbjct: 979 VALQHLDLGECYKITDSGLAHLSLLVNLQYLNLNRCDNLTDRGLAHLSRLVTLQHLNLNC 1038
Query: 311 SM-IGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYA 367
+ + DD + ++ + A LR+LNL S +SAG+ L L L+ L+LS ++D
Sbjct: 1039 CVCLTDDGLAYLSPLVA-LRHLNLRSCDNLTSAGLAHLTP-LIALQYLNLSYCDSLNDNG 1096
Query: 368 ISYMSMMPSLKFIDIS 383
+++++ + SLK +D+S
Sbjct: 1097 LTHLTRLASLKHLDLS 1112
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 191/447 (42%), Gaps = 58/447 (12%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ LR ++ + +A+L L+ LN++ C + + L LT + LK LDLS C T
Sbjct: 469 LNLRCCGNLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLASLKHLDLSECPYFT 528
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL----PVTDLVLRSLQ 185
D+G+ H +++T + + + G L N+ V L GL P T + L
Sbjct: 529 DSGLAHFTALATSLTHFYCWSQV---GSEHLEDESNIPVNPLAGLEEVAPSTTQLPNHLT 585
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG--VTKLPNISSLECLNLSNCTI 243
+ E + + ++ + ++ + + + W+G L N +L N +N +
Sbjct: 586 SSQEFELIFQDETSLTIPHSQLILLMEKSPYFKSLWSGGFPESLQNPLALTQKNFTN-LL 644
Query: 244 DSILEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+ +L+ N K PL +I S+ + E +E L++ + +
Sbjct: 645 NCLLDANF-KVPLEEILSSIHLAYYFQMTEVVKNLEEQLING--------------YKSQ 689
Query: 302 ALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
LE L S I D+ E++ + A R LN+ A V +L + L
Sbjct: 690 ELELL----SCIEDNLDELIFVLNFARKRQLNILKNYLECAAVSVLLNQISEL------- 738
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS---LTALQNLNHLERLN 417
T+ ++ F+++ + +I+G I+ + + L+ L AL++ +L+ L
Sbjct: 739 TEFEE-------------FLNLFSNEIEGGIESLDFSNNAYLTDAHLLALKDCKNLKVLR 785
Query: 418 LEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNS 474
L + + +DA L LS L HL L +TD L LS L L +L + +T+S
Sbjct: 786 LHECRNFTDAGLAHLSPLVALQHLDLGGCYKITDSGLAHLSRLVALQHLDLGGCYEITDS 845
Query: 475 GLGSFKPPRSLKLLDLHGGWLLTEDAI 501
GL +L+ L+L+ LT+D +
Sbjct: 846 GLTYLSRLVALQHLNLNRCVCLTDDGL 872
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ +AYL LR LN+ C +TS+ L LT + L+ L+LS C + D G+ HL ++
Sbjct: 1045 DGLAYLSPLVALRHLNLRSCDNLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLA 1104
Query: 141 TLEKLWLSETG-LTADGIALLSSL 163
+L+ L LSE T G+A +L
Sbjct: 1105 SLKHLDLSECPYFTISGLAHFKAL 1128
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 182/455 (40%), Gaps = 96/455 (21%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ +AYL LR LN+ C +TS+ L LT + L+ L+LS C + D G+ HL ++
Sbjct: 455 DGLAYLSPLVALRHLNLRCCGNLTSAGLAHLTPLIALQYLNLSYCDSLNDNGLTHLTRLA 514
Query: 141 TLEKL------WLSETGLTADGIALLSSL-----------------QNLSVLDLGGL--- 174
+L+ L + +++GL A AL +SL N+ V L GL
Sbjct: 515 SLKHLDLSECPYFTDSGL-AHFTALATSLTHFYCWSQVGSEHLEDESNIPVNPLAGLEEV 573
Query: 175 -PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG--VTKLPNIS 231
P T + L + E + + ++ + ++ + + + W+G L N
Sbjct: 574 APSTTQLPNHLTSSQEFELIFQDETSLTIPHSQLILLMEKSPYFKSLWSGGFPESLQNPL 633
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+L N +N ++ +L+ N K PL +I S+ + E +E L++
Sbjct: 634 ALTQKNFTN-LLNCLLDANF-KVPLEEILSSIHLAYYFQMTEVVKNLEEQLING------ 685
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAG 348
+ + LE L S I D+ E++ + A R LN+ A V +L
Sbjct: 686 --------YKSQELELL----SCIEDNLDELIFVLNFARKRQLNILKNYLECAAVSVLLN 733
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
+ L T+ ++ F+++ + +I+G I+ + + L+
Sbjct: 734 QISEL-------TEFEE-------------FLNLFSNEIEGGIESLDFSNNAYLT----- 768
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR 467
DA L L K L L L + TD L LS L L +L +
Sbjct: 769 ----------------DAHLLALKDCKNLKVLRLHECRNFTDAGLAHLSPLVALQHLDLG 812
Query: 468 DAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
+T+SGL +L+ LDL G + +T+ +
Sbjct: 813 GCYKITDSGLAHLSRLVALQHLDLGGCYEITDSGL 847
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 118/234 (50%), Gaps = 21/234 (8%)
Query: 275 YIETSLLSFLDVSNSSLSRF-----CFLTQMKA-LEHLDLSSSMIGDDSVEMVACVGANL 328
Y+E + +S L S L+ F F +++ +E LD S++ D+ + NL
Sbjct: 157 YLECAAVSVLLNQISELTEFEEFLNLFSNEIEGGIESLDFSNNAYLTDAHLLALKDCKNL 216
Query: 329 RNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTD 386
+ L L R F+ AG+ L+ L L+ L L G +I D ++Y+S + +L+ ++++
Sbjct: 217 KVLRLHECRNFTDAGLAHLS-RLVALQHLDLGGCYKITDSGLTYLSRLVALQHLNLNCC- 274
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
V D + L+ L L HL+ E +++D+ L LS+ L HL+L +
Sbjct: 275 -------VCLTDDGLAYLSHLVALQHLDLG--ECYKITDSGLAHLSSLLALQHLNLGCCN 325
Query: 447 -LTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
LTD L LS L+ L +L +RD A LT+SGL +L+ L+L+ + LT+
Sbjct: 326 NLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCYNLTD 379
>gi|168700559|ref|ZP_02732836.1| hypothetical protein GobsU_13597 [Gemmata obscuriglobus UQM 2246]
Length = 446
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 138/341 (40%), Gaps = 70/341 (20%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A + F +LRS + DC RVT + L + LK + L VTD HL I TL
Sbjct: 119 LACIAGFEHLRSFGLRDCGRVTGAGFGVLAQLPRLKWVSL--VGPVTDEAGPHLGRIKTL 176
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV---------------------- 180
E + L T T G+ L++L L +++ PVT
Sbjct: 177 ETVVLYRTKFTDAGLKELAALPALGSVNVTATPVTGTAFAEPGWSRLREIDATQTAFNAA 236
Query: 181 -LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN--------LAWTGVTKLPNIS 231
L ++ L L L L + V++ G LK R L +A TGV L +
Sbjct: 237 GLEAVSALPVLGTLTLDATAVTDSG---LKHLARARALQELSLADTPVADTGVAALAGVQ 293
Query: 232 SLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL----LSFLDV 286
+L LNL + + A L K++LA T F + + L +L LS DV
Sbjct: 294 TLRVLNLERTGVTGAAFATFPVPAELRKLNLAETRFTDASGSHLARLPALTNLSLSGCDV 353
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
+++ L+R L +K L +LDL+ + GD + E+
Sbjct: 354 TDAGLAR---LADLKKLANLDLTGTKAGDGAAEV-------------------------- 384
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
AG L LE++S GTQ+ D + + L+F+ + + +
Sbjct: 385 AGTLAELEVVSFRGTQLTDAGLKAAAHGARLRFLYVRGSKV 425
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 164/410 (40%), Gaps = 69/410 (16%)
Query: 72 LRGENSVD-AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD 130
+R E + D A +A L + + + A R+T + L + G L+ L C +VT
Sbjct: 83 VRVERTADLAPALATLKGLKCVTEVTFAS-DRLTDTDLACIAGFEHLRSFGLRDCGRVTG 141
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
AG L + L+ W+S G PVTD L + L
Sbjct: 142 AGFGVLAQLPRLK--WVSLVG-----------------------PVTDEAGPHLGRIKTL 176
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL----PNISSLECLNLSNCTIDSI 246
E + L+ ++ ++ G L P L +N+ T VT P S L ++ +
Sbjct: 177 ETVVLYRTKFTDAGLKELAALPALGSVNVTATPVTGTAFAEPGWSRLREIDATQTAF--- 233
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
N A L +S A + T L V++S L L + +AL+ L
Sbjct: 234 -----NAAGLEAVS-----------ALPVLGTLTLDATAVTDSGLK---HLARARALQEL 274
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP-NLEILSLSGTQIDD 365
L+ + + D V +A V LR LNL T + A +P L L+L+ T+ D
Sbjct: 275 SLADTPVADTGVAALAGV-QTLRVLNLERTGVTGAAFATFP--VPAELRKLNLAETRFTD 331
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
+ S+++ +P+L + +S D+ TD L L +L L L+L T+ D
Sbjct: 332 ASGSHLARLPALTNLSLSGCDV----------TD--AGLARLADLKKLANLDLTGTKAGD 379
Query: 426 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
T EL +S R LTD L + ++L L +R + +T G
Sbjct: 380 GAAEVAGTLAELEVVSFRGTQLTDAGLKAAAHGARLRFLYVRGSKVTKRG 429
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
LR ++ + T F++AG+ ++ LP L L+L T + D + +++ +L+ + +++T +
Sbjct: 223 LREIDATQTAFNAAGLEAVSA-LPVLGTLTLDATAVTDSGLKHLARARALQELSLADTPV 281
Query: 388 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
A+T + AL + L LNLE+T V+ A EL L+L
Sbjct: 282 --------ADT----GVAALAGVQTLRVLNLERTGVTGAAFATFPVPAELRKLNLAETRF 329
Query: 448 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
TD S L+ L LTNLS+ +T++GL + L LDL G
Sbjct: 330 TDASGSHLARLPALTNLSLSGCDVTDAGLARLADLKKLANLDLTG 374
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADC 100
+ DS L+HL R R + + + L + V +A L + LR LN+ +
Sbjct: 257 VTDSGLKHLARARAL------------QELSL-ADTPVADTGVAALAGVQTLRVLNL-ER 302
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
VT +A L++L+L+ + TDA HL + L L LS +T G+A L
Sbjct: 303 TGVTGAAFATFPVPAELRKLNLAE-TRFTDASGSHLARLPALTNLSLSGCDVTDAGLARL 361
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ L+ L+ LDL G D L +LE + G+Q+++ G RL FL +
Sbjct: 362 ADLKKLANLDLTGTKAGDGAAEVAGTLAELEVVSFRGTQLTDAGLKAAAHGARLRFLYVR 421
Query: 221 WTGVTK 226
+ VTK
Sbjct: 422 GSKVTK 427
>gi|307107435|gb|EFN55678.1| hypothetical protein CHLNCDRAFT_133919 [Chlorella variabilis]
Length = 553
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 190/435 (43%), Gaps = 80/435 (18%)
Query: 68 EAIEL-RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
EA +L + E S E +A LG +L L + C +T L L GMT L+EL L+ C
Sbjct: 98 EAADLSKTEASGMDEVLASLGPTPHLAQLCLDYCVDLTDGGLALLQGMTSLEELSLAGCE 157
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG--------GLPVTD 178
+T GM HL ++ L +L L + +A L+ L+ L LD+G VTD
Sbjct: 158 LLTAVGMGHLRGLTRLRRLSLQTCHQIS--LAPLAQLRQLEQLDVGWCSSLDDSDAQVTD 215
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN 237
L L L +L L+L G +VS+ AA+L+ P L LNL CL
Sbjct: 216 HGLACLHSLGQLRALNLAGVRVSDEALAALLRHLPHLRALNLE-------------RCLQ 262
Query: 238 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS-----LS 292
+ ++ ++ ++ L ++ L G T +++R L + L L + N S L+
Sbjct: 263 AGDASLAAV---SQRALQLRELHL-GYTAVSDRGLLLLGGLTQLHVLSLENCSVGDGGLA 318
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACV-----------GAN------------LR 329
LTQM+ LDLS + ++++ VA + G N LR
Sbjct: 319 VLSHLTQMR---QLDLSDTSASNETMSTVAAMRQLECLNLSFTGVNDLGLKRLRRLSSLR 375
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
LNL + F+ AG+ + L LE L L G +I D + +S + +L+ +++ G
Sbjct: 376 CLNLDSRHFTDAGM-VSVAQLAGLECLDLFGARIGDAGCASLSKLKNLRRLEVCG----G 430
Query: 390 FIQQVGAETDLVLSLTALQNLNHLE---------RLNLEQTQVSDATLFPLSTFKELIHL 440
+ G V L AL L HL L +VS++ + L EL+ L
Sbjct: 431 GVTDAG-----VAHLVALTRLQHLSLAQASACWGSCTLPNYRVSNSCILHLIKLNELMAL 485
Query: 441 SLRNA-SLTDVSLHQ 454
+L A + T +LH+
Sbjct: 486 NLSQACACTTQNLHR 500
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 81/201 (40%), Gaps = 41/201 (20%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMV-----ACVG--ANLRNLNLSNTRFSSAGVGILAGH 349
L Q++ LE LD+ DDS V AC+ LR LNL+ R S + L H
Sbjct: 189 LAQLRQLEQLDVGWCSSLDDSDAQVTDHGLACLHSLGQLRALNLAGVRVSDEALAALLRH 248
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
LP+L L+L Q G + +S ALQ
Sbjct: 249 LPHLRALNLE------------------------------RCLQAGDASLAAVSQRALQ- 277
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
L L+L T VSD L L +L LSL N S+ D L LS L+++ L + D
Sbjct: 278 ---LRELHLGYTAVSDRGLLLLGGLTQLHVLSLENCSVGDGGLAVLSHLTQMRQLDLSDT 334
Query: 470 VLTNSGLGSFKPPRSLKLLDL 490
+N + + R L+ L+L
Sbjct: 335 SASNETMSTVAAMRQLECLNL 355
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFS 339
L+ + VS+ +L+ L + L L+L + GD S+ V+ LR L+L T S
Sbjct: 232 LAGVRVSDEALAAL--LRHLPHLRALNLERCLQAGDASLAAVSQRALQLRELHLGYTAVS 289
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
G+ +L L L +LSL + D ++ +S + ++ +D+S+T ET
Sbjct: 290 DRGLLLLG-GLTQLHVLSLENCSVGDGGLAVLSHLTQMRQLDLSDTSASN-------ET- 340
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
++ + + LE LNL T V+D L L L L+L + TD + ++ L+
Sbjct: 341 ----MSTVAAMRQLECLNLSFTGVNDLGLKRLRRLSSLRCLNLDSRHFTDAGMVSVAQLA 396
Query: 460 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
L L + A + ++G S ++L+ L++ GG
Sbjct: 397 GLECLDLFGARIGDAGCASLSKLKNLRRLEVCGG 430
>gi|290970571|ref|XP_002668179.1| predicted protein [Naegleria gruberi]
gi|284081412|gb|EFC35435.1| predicted protein [Naegleria gruberi]
Length = 592
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 175/407 (42%), Gaps = 46/407 (11%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
++GM L +D+S ++ G K + + L L +S + +G +S +++L+ LD
Sbjct: 129 ISGMKQLTSVDISGN-RIGIEGAKSISEMKQLTSLNISNNIIGVEGAKSISGMKHLTSLD 187
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVT 225
+ G + D ++S+ + +L LD+ + + GA + +L+ L++ + G
Sbjct: 188 ISGNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDIFYNRIGGEGAK 247
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF--LYIETSLLSF 283
+ + L LN+S ID + G+ I+E + L I +L+
Sbjct: 248 LISEMKQLTSLNISTNEID----------------VEGSKLISEMKQLTSLNISGNLIGV 291
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
V + ++ MK L L++S ++IGD+ ++++ + L +L++ N R GV
Sbjct: 292 EGVKS--------ISGMKQLTSLNISGNLIGDEGAKLISEM-KQLTSLDIYNNRIGDEGV 342
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETD 399
++ + L +S I D +S M L + ISN I G FI ++ T
Sbjct: 343 KSIS-EMKQLTSFDISNNLIYDEGAKSISGMKQLTSLTISNNRIGGEGVKFISEIKQLTS 401
Query: 400 LVLSLTALQ--------NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L +S + + L L + + + D + +S K+L L + N + D
Sbjct: 402 LNISKNEIDGEGAKFISGMKQLTSLTIYKNGIGDEGVKSISEMKQLTSLDISNNRIGDEG 461
Query: 452 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
+ +S + +L +L I V+ G + L LD+ G + E
Sbjct: 462 VKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDISGNLIYDE 508
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 189/445 (42%), Gaps = 56/445 (12%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
++++ G N + E + + L SLN+++ + +++GM L LD+S ++
Sbjct: 137 SVDISG-NRIGIEGAKSISEMKQLTSLNISN-NIIGVEGAKSISGMKHLTSLDISGN-RI 193
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
D G+K + + L L +S + +G +S ++ L+ LD+ + + + +
Sbjct: 194 GDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDIFYNRIGGEGAKLISEMK 253
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
+L L++ +++ G+ ++ +L+ LN++ GV + + L LN+S I
Sbjct: 254 QLTSLNISTNEIDVEGSKLISEMKQLTSLNISGNLIGVEGVKSISGMKQLTSLNISGNLI 313
Query: 244 DSILEGNENKAPLAKIS-LAGTTFINER---EAFLYI-ETSLLSFLDVSNSSL--SRFCF 296
G+E ++++ L N R E I E L+ D+SN+ +
Sbjct: 314 -----GDEGAKLISEMKQLTSLDIYNNRIGDEGVKSISEMKQLTSFDISNNLIYDEGAKS 368
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-------- 348
++ MK L L +S++ IG + V+ ++ + L +LN+S G ++G
Sbjct: 369 ISGMKQLTSLTISNNRIGGEGVKFISEI-KQLTSLNISKNEIDGEGAKFISGMKQLTSLT 427
Query: 349 ---------------HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 389
+ L L +S +I D + +S M L +DIS I G
Sbjct: 428 IYKNGIGDEGVKSISEMKQLTSLDISNNRIGDEGVKSISEMEQLISLDISTNVIGGEGAK 487
Query: 390 FIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 441
FI ++ T L +S + ++ + L LN+ Q+ +S K+L L
Sbjct: 488 FISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLNISGNQIGVEGAKFISEMKQLTSLD 547
Query: 442 LRNASLTDVSLHQLSSLSKLTNLSI 466
+ + D +S + +LT+L +
Sbjct: 548 ISKNEIGDAGAKFISEMKQLTSLDV 572
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 113/244 (46%), Gaps = 33/244 (13%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + + L SL +++ R+ + ++ + L L++S+ ++ G K + +
Sbjct: 364 EGAKSISGMKQLTSLTISN-NRIGGEGVKFISEIKQLTSLNISKN-EIDGEGAKFISGMK 421
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L + + G+ +G+ +S ++ L+ LD+ + D ++S+ + +L LD+ + +
Sbjct: 422 QLTSLTIYKNGIGDEGVKSISEMKQLTSLDISNNRIGDEGVKSISEMEQLISLDISTNVI 481
Query: 201 SNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
GA + +L+ L+++ GV + + L LN+S GN+
Sbjct: 482 GGEGAKFISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSLNIS---------GNQ---- 528
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMI 313
I + G FI+E + L+ LD+S + + F+++MK L LD+ ++ I
Sbjct: 529 ---IGVEGAKFISEMKQ--------LTSLDISKNEIGDAGAKFISEMKQLTSLDVYANRI 577
Query: 314 GDDS 317
D++
Sbjct: 578 SDEA 581
>gi|149175887|ref|ZP_01854505.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845334|gb|EDL59679.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 360
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 29/263 (11%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
D+ + L LE++ LS GL+ G+ L L L L V+D L L+ L++
Sbjct: 102 DSDLVWLNDFPNLERISLSGKGLSNTGLVHLKRFHRLKRLMLWNTSVSDDGLVHLKELSQ 161
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTID 244
L +LDL+ + VS G A L+ L++LNL T VT ++ S+L LNL+ +
Sbjct: 162 LNHLDLFYTPVSGSGLAHLQGLTNLTWLNLQGTAVTNAGLKQVNCFSALRVLNLNQTS-- 219
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
IS AG + + + ++ L V+ + LS L ++ L+
Sbjct: 220 --------------ISDAGLVHLRDLPQLIILQ---LEQTQVTGTGLSELSSLPKLYCLK 262
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
L+ S+I D S+ + +R L L +T+ S AG+ L+G LP L+ L+LSGTQ+
Sbjct: 263 ---LNGSLINDSSMSHLKSFKTLIR-LELQDTQISDAGLVHLSG-LPLLDALNLSGTQVT 317
Query: 365 DYAISYMSMMPSLKFIDISNTDI 387
D + Y+ +P LK + + NT +
Sbjct: 318 DAGLVYLQGLPRLKNVYLKNTQV 340
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L + VS S L+ LT L L+L + + + ++ V C A LR LNL+ T S
Sbjct: 167 LFYTPVSGSGLAHLQGLTN---LTWLNLQGTAVTNAGLKQVNCFSA-LRVLNLNQTSISD 222
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
AG+ L LP L IL L TQ+ +S +S +P L + ++ + I
Sbjct: 223 AGLVHLRD-LPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDS---------- 271
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
S++ L++ L RL L+ TQ+SDA L LS L L+L +TD L L L +
Sbjct: 272 --SMSHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQVTDAGLVYLQGLPR 329
Query: 461 LTNLSIRDAVLTNSGL 476
L N+ +++ +T+ GL
Sbjct: 330 LKNVYLKNTQVTSEGL 345
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 273 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 332
F +E LS +SN+ L L + L+ L L ++ + DD + + + + L +L+
Sbjct: 111 FPNLERISLSGKGLSNTGL---VHLKRFHRLKRLMLWNTSVSDDGLVHLKEL-SQLNHLD 166
Query: 333 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
L T S +G+ L G L NL L+L GT + + + ++ +L+ ++++ T I
Sbjct: 167 LFYTPVSGSGLAHLQG-LTNLTWLNLQGTAVTNAGLKQVNCFSALRVLNLNQTSISD--- 222
Query: 393 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 452
L L++L L L LEQTQV+ L LS+ +L L L + + D S+
Sbjct: 223 ---------AGLVHLRDLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDSSM 273
Query: 453 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 512
L S L L ++D ++++GL L L+L G + DA L + + PR++
Sbjct: 274 SHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQV--TDAGLVYLQGLPRLK 331
Query: 513 VWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMP 551
+V + Q+ S G R +++Q +DP+P
Sbjct: 332 -----NVYLKNTQVTSEG-----LEQRKLILQQSRDPLP 360
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V +A+L L LN+ VT++ L + + L+ L+L++ ++DAG+ HL
Sbjct: 172 VSGSGLAHLQGLTNLTWLNLQGTA-VTNAGLKQVNCFSALRVLNLNQT-SISDAGLVHLR 229
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV---LRSLQVLTKLEY-- 192
+ L L L +T +T G++ LSSL L L L G + D L+S + L +LE
Sbjct: 230 DLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDSSMSHLKSFKTLIRLELQD 289
Query: 193 -------------------LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L+L G+QV++ G L+ PRL + L T VT
Sbjct: 290 TQISDAGLVHLSGLPLLDALNLSGTQVTDAGLVYLQGLPRLKNVYLKNTQVT 341
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M++L +F+ L L + D + ++ + L L+G+ L L+LS +VTDAG+ +L + L
Sbjct: 273 MSHLKSFKTLIRLELQDTQ-ISDAGLVHLSGLPLLDALNLS-GTQVTDAGLVYLQGLPRL 330
Query: 143 EKLWLSETGLTADGI 157
+ ++L T +T++G+
Sbjct: 331 KNVYLKNTQVTSEGL 345
>gi|149174278|ref|ZP_01852905.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
gi|148846823|gb|EDL61159.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
Length = 1815
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 199/444 (44%), Gaps = 61/444 (13%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T L+ M L L + ++++G++ L + LEKL + T + G+ L
Sbjct: 1318 QITDKGFGYLSNMPSLTTLYVGSTA-ISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLK 1376
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+NL +L L ++D+ L+ L L L L L ++++ G A LK L L+L
Sbjct: 1377 DLKNLKILGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDS 1436
Query: 222 TGVTK--LPNISSLECLN--------------------LSNCTIDSILEGNE---NKAPL 256
T +T L ++S L+ L L NC I S E + +P+
Sbjct: 1437 TPITDEGLKHLSGLKMLQTLELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPM 1496
Query: 257 AKISLA----------GTTF-INEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKAL 303
+A G F +N + L E + + + + N+S L ++K L
Sbjct: 1497 TDREIAEWVIGMGGGIGIGFKLNYKIEELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTL 1556
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
++L L S+ I D ++ + + NL + L T + G+ L G L NL +L LS T+I
Sbjct: 1557 KYLFLESTSISDTGLQYLRQM-QNLEEIFLDYTNITDEGLLHLRG-LQNLRVLRLSKTKI 1614
Query: 364 DDYAISYMSMMPSLKFID-----ISNTDIK--GFIQQVGAETDLVLSLTA---------L 407
+ ++ +P L ID I+N+ +K G ++Q+ T L +S + +
Sbjct: 1615 TGEGLGHLKDLPRLHTIDVNRAAITNSGMKAMGDLKQL---TSLNISFNSQVDDTGLGYI 1671
Query: 408 QNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+ L LE+L +++D L L K+L L+L + +T L QL+ L+ L +
Sbjct: 1672 EGLTKLEKLFAHLVPKITDEGLKHLQGMKQLESLTLSSTGITTTGLEQLTKHESLSKLDL 1731
Query: 467 RDAVLTNSGLGSFKPPRSLKLLDL 490
+ +T+SGL + ++L+ L L
Sbjct: 1732 TNCKITDSGLEHLQDLKNLRDLRL 1755
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 202/478 (42%), Gaps = 33/478 (6%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G ++ + L + L L+ + + + L L + LK L L ++D +
Sbjct: 1339 GSTAISNSGVEQLKDMKQLEKLSFTNTQ-IDGVGLGHLKDLKNLKILGL-ESTSISDVDL 1396
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL + L L LS + G+A L L+NL VL L P+TD L+ L L L+ L
Sbjct: 1397 QHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPITDEGLKHLSGLKMLQTL 1456
Query: 194 DLWGSQVSNRGAAVL-KMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSNCTIDSIL 247
+L ++V+ +G A L K P ++ T + + + E + I
Sbjct: 1457 ELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPMTDREIAEWVIGMGGGIGIGF 1516
Query: 248 EGNENKAPLA-------KISLAGTTFIN-EREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 299
+ N L +SL +F + + + ++T FL+ ++ S + +L Q
Sbjct: 1517 KLNYKIEELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTLKYLFLESTSISDTGLQYLRQ 1576
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
M+ LE + L + I D+ + + + NLR L LS T+ + G+G L LP L + ++
Sbjct: 1577 MQNLEEIFLDYTNITDEGLLHLRGL-QNLRVLRLSKTKITGEGLGHLK-DLPRLHTIDVN 1634
Query: 360 GTQIDDYAISYMSMMPSLKFIDIS-NTDIK----GFIQQVGAETDLVLSLTA-------- 406
I + + M + L ++IS N+ + G+I+ + L L
Sbjct: 1635 RAAITNSGMKAMGDLKQLTSLNISFNSQVDDTGLGYIEGLTKLEKLFAHLVPKITDEGLK 1694
Query: 407 -LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
LQ + LE L L T ++ L L+ + L L L N +TD L L L L +L
Sbjct: 1695 HLQGMKQLESLTLSSTGITTTGLEQLTKHESLSKLDLTNCKITDSGLEHLQDLKNLRDLR 1754
Query: 466 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPS 523
+ ++++GL + L+ LDL +T I K P+ ++ + P+
Sbjct: 1755 LDLTPVSDAGLQHLYSLKKLENLDLR-ETKVTSQGIADLQKALPKCKIESDFKTKPPA 1811
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 172/395 (43%), Gaps = 51/395 (12%)
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L L T + D + L+ L+ L L+L V+D L+ L+ + L Y+ L G+Q++++G
Sbjct: 1265 LDLKGTSVKDDDLKRLAGLKTLPKLNLENTLVSDTGLQYLKDIP-LNYISLIGTQITDKG 1323
Query: 205 AAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
L P L+ L + T GV +L ++ LE L+ +N ID + G+ KI
Sbjct: 1324 FGYLSNMPSLTTLYVGSTAISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLKDLKNLKI 1383
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDS 317
+T I++ + +L L +SN + S +L +K L+ L L S+ I D+
Sbjct: 1384 LGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPITDEG 1443
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS--------LSGTQIDD---- 365
++ ++ + L+ L L T+ + G+ L LPN +I+S S + + D
Sbjct: 1444 LKHLSGLKM-LQTLELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPMTDREIA 1502
Query: 366 -----------------YAISYMSMMP------SLKFIDISNTDIKGF-----IQQVGAE 397
Y I + P SLK + D++ ++ + E
Sbjct: 1503 EWVIGMGGGIGIGFKLNYKIEELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTLKYLFLE 1562
Query: 398 TDLV--LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
+ + L L+ + +LE + L+ T ++D L L + L L L +T L L
Sbjct: 1563 STSISDTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGLQNLRVLRLSKTKITGEGLGHL 1622
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L +L + + A +TNSG+ + + L L++
Sbjct: 1623 KDLPRLHTIDVNRAAITNSGMKAMGDLKQLTSLNI 1657
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
+ L L GT + D + ++ + +L +++ NT ++S T LQ L
Sbjct: 1262 INFLDLKGTSVKDDDLKRLAGLKTLPKLNLENT---------------LVSDTGLQYLKD 1306
Query: 413 --LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L ++L TQ++D LS L L + + ++++ + QL + +L LS +
Sbjct: 1307 IPLNYISLIGTQITDKGFGYLSNMPSLTTLYVGSTAISNSGVEQLKDMKQLEKLSFTNTQ 1366
Query: 471 LTNSGLGSFKPPRSLKLLDL 490
+ GLG K ++LK+L L
Sbjct: 1367 IDGVGLGHLKDLKNLKILGL 1386
>gi|188586163|ref|YP_001917708.1| hypothetical protein Nther_1542 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350850|gb|ACB85120.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 344
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L L LN+ + +T + L LK++ L+ VTD G K L +LE+L
Sbjct: 97 LAEVDNLEELNL-NYTEITDEGIEQLAEADNLKQISLTHT-DVTDEGTKLLAESESLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
LS T +T DG+ L NL LDL G VTD L LE L L ++V++ G
Sbjct: 155 ILSGTEVTDDGLEHLIEADNLKKLDLHGTDVTDDGAEHLAETDNLEKLSLVDTEVTDEGI 214
Query: 206 AVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
L L L L WT GV L +LE L+L
Sbjct: 215 EQLVKVDNLEVLILGWTEVTDNGVEYLAEADNLEMLHLD--------------------- 253
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
GT NE +L E L LD+ + ++ L + +LE LDL + + D+ V+
Sbjct: 254 --GTEITNEGVKYLA-EADNLEELDLKQTKVTDVNALAETDSLEELDLWDTDVTDEGVKE 310
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
+A + L+ +NL T ++ GV HL + +I
Sbjct: 311 LAEADS-LKVVNLDETEVTNEGV----EHLEDEDI 340
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 34/320 (10%)
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
+LG +T+ + L LT + G ++ +G LS V L
Sbjct: 46 ELGVEQITEENIEDLTTLT------VSGEDINIKGIEYAINLQELSLQGTKIEDVNTLAE 99
Query: 230 ISSLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFINEREAFLY----IETSLLS 282
+ +LE LNL+ I EG E A L +ISL T +E L +E +LS
Sbjct: 100 VDNLEELNLNYTEITD--EGIEQLAEADNLKQISLTHTDVTDEGTKLLAESESLERLILS 157
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
+V++ L L + L+ LDL + + DD E +A NL L+L +T + G
Sbjct: 158 GTEVTDDGLEH---LIEADNLKKLDLHGTDVTDDGAEHLAETD-NLEKLSLVDTEVTDEG 213
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
+ L + NLE+L L T++ D + Y++ +L+ + + T+I + AE D
Sbjct: 214 IEQLV-KVDNLEVLILGWTEVTDNGVEYLAEADNLEMLHLDGTEITNEGVKYLAEAD--- 269
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
+LE L+L+QT+V+D L+ L L L + +TD + +L+ L
Sbjct: 270 ---------NLEELDLKQTKVTDVN--ALAETDSLEELDLWDTDVTDEGVKELAEADSLK 318
Query: 463 NLSIRDAVLTNSGLGSFKPP 482
+++ + +TN G+ +
Sbjct: 319 VVNLDETEVTNEGVEHLEDE 338
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L L + + + L ++ LE L+L+ + I D+ +E +A NL+ ++L++T +
Sbjct: 81 LQELSLQGTKIEDVNTLAEVDNLEELNLNYTEITDEGIEQLAEAD-NLKQISLTHTDVTD 139
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G +LA +LE L LSGT++ D + ++ +LK +D+ TD+ + AETD
Sbjct: 140 EGTKLLA-ESESLERLILSGTEVTDDGLEHLIEADNLKKLDLHGTDVTDDGAEHLAETD- 197
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+LE+L+L T+V+D + L L L L +TD + L+
Sbjct: 198 -----------NLEKLSLVDTEVTDEGIEQLVKVDNLEVLILGWTEVTDNGVEYLAEADN 246
Query: 461 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L L + +TN G+ +L+ LDL
Sbjct: 247 LEMLHLDGTEITNEGVKYLAEADNLEELDL 276
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 138/307 (44%), Gaps = 34/307 (11%)
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
++++L+ L + G D+ ++ ++ L+ L L G+++ + L L LNL
Sbjct: 55 ENIEDLTTLTVSG---EDINIKGIEYAINLQELSLQGTKIED--VNTLAEVDNLEELNLN 109
Query: 221 WT-----GVTKLPNISSLECLNLSNCTIDSILEGNE---NKAPLAKISLAGTTFINEREA 272
+T G+ +L +L+ ++L++ D EG + L ++ L+GT ++
Sbjct: 110 YTEITDEGIEQLAEADNLKQISLTHT--DVTDEGTKLLAESESLERLILSGTEVTDDGLE 167
Query: 273 FLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
L IE L LD+ + ++ L + LE L L + + D+ +E + V NL
Sbjct: 168 HL-IEADNLKKLDLHGTDVTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLVKVD-NLEV 225
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L L T + GV LA NLE+L L GT+I + + Y++ +L+ +D+ T
Sbjct: 226 LILGWTEVTDNGVEYLA-EADNLEMLHLDGTEITNEGVKYLAEADNLEELDLKQTK---- 280
Query: 391 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
V + AL + LE L+L T V+D + L+ L ++L +T+
Sbjct: 281 ----------VTDVNALAETDSLEELDLWDTDVTDEGVKELAEADSLKVVNLDETEVTNE 330
Query: 451 SLHQLSS 457
+ L
Sbjct: 331 GVEHLED 337
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL+ L+L T+ V LA + NLE L+L+ T+I D I ++ +LK I +++TD
Sbjct: 80 NLQELSLQGTKIED--VNTLA-EVDNLEELNLNYTEITDEGIEQLAEADNLKQISLTHTD 136
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ AE++ LERL L T+V+D L L L L L
Sbjct: 137 VTDEGTKLLAESE------------SLERLILSGTEVTDDGLEHLIEADNLKKLDLHGTD 184
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 506
+TD L+ L LS+ D +T+ G+ +L++L L GW D +++
Sbjct: 185 VTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLVKVDNLEVLIL--GWTEVTDNGVEYLA 242
Query: 507 MHPRIEVWH 515
+E+ H
Sbjct: 243 EADNLEMLH 251
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 404
I ++ +L L++SG I+ I Y +L+ + + T I+ +
Sbjct: 52 ITEENIEDLTTLTVSGEDINIKGIEYA---INLQELSLQGTKIE--------------DV 94
Query: 405 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
L +++LE LNL T+++D + L+ L +SL + +TD L+ L L
Sbjct: 95 NTLAEVDNLEELNLNYTEITDEGIEQLAEADNLKQISLTHTDVTDEGTKLLAESESLERL 154
Query: 465 SIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+ +T+ GL +LK LDLHG
Sbjct: 155 ILSGTEVTDDGLEHLIEADNLKKLDLHG 182
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 40/209 (19%)
Query: 26 KWRRQRRSLERL---PAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEW 82
K + SLERL + D L HLI N + ++L G + D +
Sbjct: 143 KLLAESESLERLILSGTEVTDDGLEHLIEAD------------NLKKLDLHGTDVTD-DG 189
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+L L L++ D VT + L + L+ L L +VTD G+++L L
Sbjct: 190 AEHLAETDNLEKLSLVDTE-VTDEGIEQLVKVDNLEVLILG-WTEVTDNGVEYLAEADNL 247
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLG----------------------GLPVTDLV 180
E L L T +T +G+ L+ NL LDL VTD
Sbjct: 248 EMLHLDGTEITNEGVKYLAEADNLEELDLKQTKVTDVNALAETDSLEELDLWDTDVTDEG 307
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ L L+ ++L ++V+N G L+
Sbjct: 308 VKELAEADSLKVVNLDETEVTNEGVEHLE 336
>gi|296124076|ref|YP_003631854.1| ribonuclease inhibitor [Planctomyces limnophilus DSM 3776]
gi|296016416|gb|ADG69655.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Planctomyces
limnophilus DSM 3776]
Length = 474
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 183/411 (44%), Gaps = 69/411 (16%)
Query: 71 ELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD 130
E E S+ + +A + +L L + + ++T + L +T L L L ++TD
Sbjct: 110 ETAAETSIGDDDLALVAKLTHLTELRL-EGPKITDKGVLLLKPLTNLVVLGLEN-TQLTD 167
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
G + L S LE L+L T + +A LS L L LDL VTD ++SL L++L
Sbjct: 168 TGAEVLASFPNLEVLYLRRTNILDPALAHLSKLAKLRALDLRFTNVTDEGMKSLAGLSQL 227
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTID 244
L L ++V++ ++ P L LN+ W G+++L + +L L L + +
Sbjct: 228 RDLRLQATRVTDASLPLIAKLPNLQKLNV-WGENFTDAGLSQLADTKTLRILELDDTRLT 286
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
S EG I L G T + E L++ + + N L+ + M +
Sbjct: 287 S--EG--------LIKLGGLTNLEE----LHVRRT-----RIKNDGLA---VVKNMPKMR 324
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
L L ++ D +E V+ + NL L+L+ F GV LAG L +LE LSL T
Sbjct: 325 RLLLRDTLCTDPGLEAVSGL-KNLVELDLTEGIFGDDGVKNLAG-LTSLEDLSLWATTTS 382
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
D I ++++L L+ LNLEQT+++
Sbjct: 383 DAGIE------------------------------------SIRDLKKLKALNLEQTRIT 406
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
DA ++ F EL L+L +TD +L +L++L KL LS+ + ++ + G
Sbjct: 407 DAAAKTIAGFGELTELNLSQTEVTDATLKELAALKKLKKLSVNNCIMLSGG 457
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + + GEN DA ++ L + LR L + D R +TS L L G+T L+EL + R
Sbjct: 250 NLQKLNVWGENFTDA-GLSQLADTKTLRILELDDTR-LTSEGLIKLGGLTNLEELHVRR- 306
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
++ + G+ + ++ + +L L +T T G+ +S L+NL LDL D +++L
Sbjct: 307 TRIKNDGLAVVKNMPKMRRLLLRDTLCTDPGLEAVSGLKNLVELDLTEGIFGDDGVKNLA 366
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSN 240
LT LE L LW + S+ G ++ +L LNL T +T + L LNLS
Sbjct: 367 GLTSLEDLSLWATTTSDAGIESIRDLKKLKALNLEQTRITDAAAKTIAGFGELTELNLSQ 426
Query: 241 CTI 243
+
Sbjct: 427 TEV 429
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ + IGDD + +VA + +L L L + + GV +L L NL +L L TQ+ D
Sbjct: 113 AETSIGDDDLALVAKL-THLTELRLEGPKITDKGV-LLLKPLTNLVVLGLENTQLTDTGA 170
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
++ P+L+ + + T+I L +L L L L L+L T V+D +
Sbjct: 171 EVLASFPNLEVLYLRRTNI------------LDPALAHLSKLAKLRALDLRFTNVTDEGM 218
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
L+ +L L L+ +TD SL ++ L L L++ T++GL ++L++L
Sbjct: 219 KSLAGLSQLRDLRLQATRVTDASLPLIAKLPNLQKLNVWGENFTDAGLSQLADTKTLRIL 278
Query: 489 DLHGGWLLTEDAI 501
+L L +E I
Sbjct: 279 ELDDTRLTSEGLI 291
>gi|46445682|ref|YP_007047.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399323|emb|CAF22772.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 531
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ L+ +++ + +A L + L+ LN++ C ++T+ L + L+ L+LS C
Sbjct: 322 NLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCDKLTNKGLAHFKSLIALQYLNLSGC 381
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+TDAG+ HL + L+ L LS D G+A L L L L+L G +TD L
Sbjct: 382 AFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAH 441
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L L L++LDL W + ++N G L L LNL+ G+T L ++++L+ L
Sbjct: 442 LTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSGCIYLTEAGLTHLTSLTNLQQL 501
Query: 237 NLSNC 241
NL++C
Sbjct: 502 NLNHC 506
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L G + +A+L L+ L+++ C +T++ L L + L+ L+LS C+
Sbjct: 424 QYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSGCIY 483
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTAD 155
+T+AG+ HL S++ L++L L+ AD
Sbjct: 484 LTEAGLTHLTSLTNLQQLNLNHCEHFAD 511
>gi|46445970|ref|YP_007335.1| hypothetical protein pc0336 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399611|emb|CAF23060.1| hypothetical protein pc0336 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 602
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L N++ +A+L L+ LN++ C+ +T + L LT + L+ LDLS C
Sbjct: 336 QHLDLSECNNLTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDN 395
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
+TDAG+ HL + L+ L LS LT G+A L+ L L L L G +TD+ L L
Sbjct: 396 LTDAGLAHLTPLMALQHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLT 455
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNL 238
L L +L+L W ++++ G A L L LNL W G+ L + +L+ L+L
Sbjct: 456 PLVALTHLNLSWCDKLTDAGLAHLTPLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDL 515
Query: 239 SNC 241
+ C
Sbjct: 516 NRC 518
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ LN+ CR++T + L LT + L+ LDL+RC K+TDAG+ HL S+ L
Sbjct: 476 LAHLTPLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLTSLVNL 535
Query: 143 EKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWG 197
L LS LT G+A L+ L L L+L +TD L L L L++LDL G
Sbjct: 536 RHLNLSYCRKLTDVGLAHLTPLVALQHLNLSCCRKLTDAGLAHLASLLALQHLDLSG 592
>gi|384254255|gb|EIE27729.1| RNI-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 515
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 168/375 (44%), Gaps = 50/375 (13%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S WA GM L+ LDLS C +TDA +K L +++ + L LS T + GI L S+
Sbjct: 160 SGAWA--GMKQLENLDLSWCSGITDADVKALAALTAITGLQLSRTLVADSGIFALRSMSR 217
Query: 166 LSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-- 222
L L L G +++ + S+ LT LE L+L VS +G + L L LN+A+T
Sbjct: 218 LRCLGLAGCSGISNGAVGSVSALTSLEELNLEWCTVSVKGLSHLSTLTELRSLNVAYTTA 277
Query: 223 ---GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
+ ++++L LNL +C + D L L ++L+ T ++
Sbjct: 278 GDNALAAWTSLTNLRTLNLDSCPVSDRGLHHISELTNLEDVNLSDTAITDQ--------- 328
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTR 337
+++F +K ++ L+LS ++ +GD + VA + A L L+L
Sbjct: 329 GMIAF--------------APLKGMQRLNLSYTAGVGDLGLAAVARLTA-LTELHLDGRS 373
Query: 338 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID-----ISNTDIKGFIQ 392
F+ G+ +A L L+ L L G +I D ++ L+ ++ IS+ +K I
Sbjct: 374 FTDVGLRTIA-PLTQLQTLDLFGARITDAGCVHLRPFRRLERLEICGGGISDEGVKELIW 432
Query: 393 QVGAETDLVLSLTA---------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
G + L L+ A L L+ L LNL TQ++ + PL + L L L+
Sbjct: 433 LTGLQ-HLSLAQNARITDRASLFLSGLSQLRGLNLTGTQLTGNGILPLRSLTNLESLCLK 491
Query: 444 NASLTDVSLHQLSSL 458
+ + +L L
Sbjct: 492 RTRVKQAAADRLQPL 506
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 218/502 (43%), Gaps = 70/502 (13%)
Query: 28 RRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYL 86
R + ++ LPA LA +L LI + L +F + + ++L V+ +W+ +L
Sbjct: 15 RLHKYDIDSLPADLAQLVLDELIYTASLDQEGLALFSRQHIYNLKLGECAGVEDDWLRHL 74
Query: 87 G------------------AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
LR L++ C ++S L ALT ++ + L+L C +
Sbjct: 75 APQGTGMHGLFITKHSGAAGLTNLRDLSLQGCEGLSS--LSALTDLSKVTSLNLKGCSGI 132
Query: 129 TDAGMKHL------LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
+ G++HL S+ ++ ++ SE + A + L+NL + G +TD ++
Sbjct: 133 S--GLRHLSGALFCASLGSVAQMCGSE--YWSGAWAGMKQLENLDLSWCSG--ITDADVK 186
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECL 236
+L LT + L L + V++ G L+ RL L LA V + ++SLE L
Sbjct: 187 ALAALTAITGLQLSRTLVADSGIFALRSMSRLRCLGLAGCSGISNGAVGSVSALTSLEEL 246
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF----LDVSNSSLS 292
NL CT+ ++G + + L ++ + + L TSL + LD S
Sbjct: 247 NLEWCTVS--VKGLSHLSTLTELRSLNVAYTTAGDNALAAWTSLTNLRTLNLDSCPVSDR 304
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA----G 348
++++ LE ++LS + I D + A + ++ LNLS T AGVG L
Sbjct: 305 GLHHISELTNLEDVNLSDTAITDQGMIAFAPL-KGMQRLNLSYT----AGVGDLGLAAVA 359
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
L L L L G D + ++ + L+ +D+ I TD L+
Sbjct: 360 RLTALTELHLDGRSFTDVGLRTIAPLTQLQTLDLFGARI----------TDA--GCVHLR 407
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIR 467
LERL + +SD + L L HLSL +NA +TD + LS LS+L L++
Sbjct: 408 PFRRLERLEICGGGISDEGVKELIWLTGLQHLSLAQNARITDRASLFLSGLSQLRGLNLT 467
Query: 468 DAVLTNSGLGSFKPPRSLKLLD 489
LT +G+ P RSL L+
Sbjct: 468 GTQLTGNGI---LPLRSLTNLE 486
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 20/195 (10%)
Query: 300 MKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
MK LE+LDLS S I D V+ +A + A + L LS T + +G+ L + L L L
Sbjct: 166 MKQLENLDLSWCSGITDADVKALAALTA-ITGLQLSRTLVADSGIFALR-SMSRLRCLGL 223
Query: 359 SG-TQIDDYAISYMSMMPSLKFIDIS--NTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
+G + I + A+ +S + SL+ +++ +KG L+ L L L
Sbjct: 224 AGCSGISNGAVGSVSALTSLEELNLEWCTVSVKG--------------LSHLSTLTELRS 269
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LN+ T D L ++ L L+L + ++D LH +S L+ L ++++ D +T+ G
Sbjct: 270 LNVAYTTAGDNALAAWTSLTNLRTLNLDSCPVSDRGLHHISELTNLEDVNLSDTAITDQG 329
Query: 476 LGSFKPPRSLKLLDL 490
+ +F P + ++ L+L
Sbjct: 330 MIAFAPLKGMQRLNL 344
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS- 161
V S ++AL M+ L+ L L+ C +++ + + ++++LE+L L ++ G++ LS
Sbjct: 204 VADSGIFALRSMSRLRCLGLAGCSGISNGAVGSVSALTSLEELNLEWCTVSVKGLSHLST 263
Query: 162 -----------------------SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
SL NL L+L PV+D L + LT LE ++L +
Sbjct: 264 LTELRSLNVAYTTAGDNALAAWTSLTNLRTLNLDSCPVSDRGLHHISELTNLEDVNLSDT 323
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNEN 252
++++G + LNL++T G+ + +++L L+L + + G
Sbjct: 324 AITDQGMIAFAPLKGMQRLNLSYTAGVGDLGLAAVARLTALTELHLDGRSFTDV--GLRT 381
Query: 253 KAPL----------AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
APL A+I+ AG + F +E + +S+ + +LT
Sbjct: 382 IAPLTQLQTLDLFGARITDAGCVHL---RPFRRLERLEICGGGISDEGVKELIWLT---G 435
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
L+HL L+ + D + + LR LNL+ T+ + G+ L L NLE L L T+
Sbjct: 436 LQHLSLAQNARITDRASLFLSGLSQLRGLNLTGTQLTGNGILPLR-SLTNLESLCLKRTR 494
Query: 363 IDDYA 367
+ A
Sbjct: 495 VKQAA 499
>gi|290974964|ref|XP_002670214.1| predicted protein [Naegleria gruberi]
gi|284083770|gb|EFC37470.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 62 VFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELD 121
V K + E R E + +++M + ++ R R + S + +T M LK LD
Sbjct: 81 VIKFKQKFTETRIELCMKSQFMNSIVNLKFSR-------RLLDSIQVKFITEMKQLKSLD 133
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
+S ++ D G K + + L L + + G+ ++ +++L+ LD+ G + D +
Sbjct: 134 ISEN-RIGDEGAKFISEMKQLTSLDIGYNRIGVVGVKFINEMKHLTSLDISGNGIGDEGV 192
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECL 236
+S+ L +L LD +++ ++GA + L+ L ++ G + + L+ L
Sbjct: 193 KSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAEGARFISEMKQLKSL 252
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS--RF 294
++ N I G+E G FINE + L+ LD+S + +
Sbjct: 253 SIYNNQI-----GDE-----------GAKFINEMKQ--------LTSLDISGNEIGVEGV 288
Query: 295 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
+++MK L L++ + IGD+ ++++ + L +LN+ N + G ++ + L+
Sbjct: 289 IPISEMKQLTSLEIGGNQIGDEGAKLISEM-KQLISLNIYNNQIGIEGAKFIS-EMKQLK 346
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L + G QI D + ++S M L +DI +I
Sbjct: 347 SLYIGGNQIGDEGVKFISEMKQLTSLDIGYNEI 379
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F+T+MK L+ LD+S + IGD+ + ++ + L +L++ R GV + + +L
Sbjct: 122 FITEMKQLKSLDISENRIGDEGAKFISEM-KQLTSLDIGYNRIGVVGVKFI-NEMKHLTS 179
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L +SG I D + +S + L +D +N I GA+ ++ + HL
Sbjct: 180 LDISGNGIGDEGVKSISELKQLTSLDFNNNRIG----DKGAK--------SISEMKHLTL 227
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
L++ + +S K+L LS+ N + D ++ + +LT+L I + G
Sbjct: 228 LSINNNHIGAEGARFISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEG 287
Query: 476 LGSFKPPRSLKLLDLHGGWLLTEDAIL 502
+ + L L++ G + E A L
Sbjct: 288 VIPISEMKQLTSLEIGGNQIGDEGAKL 314
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F+ +MK L LD+S + IGD+ V+ ++ + L +L+ +N R G ++ + +L +
Sbjct: 170 FINEMKHLTSLDISGNGIGDEGVKSISEL-KQLTSLDFNNNRIGDKGAKSIS-EMKHLTL 227
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
LS++ I ++S M LK + I N Q+G E + + L
Sbjct: 228 LSINNNHIGAEGARFISEMKQLKSLSIYNN-------QIGDE-----GAKFINEMKQLTS 275
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
L++ ++ + P+S K+L L + + D +S + +L +L+I + + G
Sbjct: 276 LDISGNEIGVEGVIPISEMKQLTSLEIGGNQIGDEGAKLISEMKQLISLNIYNNQIGIEG 335
Query: 476 LGSFKPPRSLKLLDLHGGWLLTE 498
+ LK L + G + E
Sbjct: 336 AKFISEMKQLKSLYIGGNQIGDE 358
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGD 315
+I + G FINE + L+ LD+S + + ++++K L LD +++ IGD
Sbjct: 162 RIGVVGVKFINEMKH--------LTSLDISGNGIGDEGVKSISELKQLTSLDFNNNRIGD 213
Query: 316 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 375
+ ++ + +L L+++N + G ++ + L+ LS+ QI D +++ M
Sbjct: 214 KGAKSISEM-KHLTLLSINNNHIGAEGARFIS-EMKQLKSLSIYNNQIGDEGAKFINEMK 271
Query: 376 SLKFIDISNTDI--KGFI---------------QQVGAETDLVLSLTALQNLNHLERLNL 418
L +DIS +I +G I Q+G E ++S + L LN+
Sbjct: 272 QLTSLDISGNEIGVEGVIPISEMKQLTSLEIGGNQIGDEGAKLIS-----EMKQLISLNI 326
Query: 419 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
Q+ +S K+L L + + D + +S + +LT+L I
Sbjct: 327 YNNQIGIEGAKFISEMKQLKSLYIGGNQIGDEGVKFISEMKQLTSLDI 374
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 19/185 (10%)
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
+ L+ L +S +I D ++S M L +DI G+ ++G V+ + +
Sbjct: 125 EMKQLKSLDISENRIGDEGAKFISEMKQLTSLDI------GY-NRIG-----VVGVKFIN 172
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
+ HL L++ + D + +S K+L L N + D +S + LT LSI +
Sbjct: 173 EMKHLTSLDISGNGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINN 232
Query: 469 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 528
+ G + LK L ++ + E A +F E+ S+ ++IG
Sbjct: 233 NHIGAEGARFISEMKQLKSLSIYNNQIGDEGA--KFIN-----EMKQLTSLDISGNEIGV 285
Query: 529 NGPSP 533
G P
Sbjct: 286 EGVIP 290
>gi|46447626|ref|YP_008991.1| hypothetical protein pc1992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401267|emb|CAF24716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 537
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 16/307 (5%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L+ F + E + + ++ L + L+ LN+ C+ +T + L LT +T
Sbjct: 230 FEKILKHFSNEIEELNFSDNVYLTDAYLLALKDCKNLKMLNLKSCKNLTDAGLAHLTPLT 289
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL 174
L+ LDLS C +TDAG+ +L + L+ L LS LT G+A L+ L L LDL
Sbjct: 290 ALRRLDLSFCRNLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSIC 349
Query: 175 -PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTK 226
+TD L L L L++L+L + ++S+ G A L+ L L+L++ G+
Sbjct: 350 GKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAH 409
Query: 227 LPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
L +++L+ L+L+ C ++ L L + L+ + L+ + L +L
Sbjct: 410 LARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQYL 469
Query: 285 DVSNS---SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSS 340
++++ + + L+ + AL+HLDL + I D + + +GA L+ L LS T +
Sbjct: 470 NLNHCQKLTDAGLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGA-LQYLGLSRCTNLTD 528
Query: 341 AGVGILA 347
AG+ L+
Sbjct: 529 AGLAHLS 535
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 17/179 (9%)
Query: 328 LRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT 385
LR L+LS R + AG+ L L L+ L LS + + D +++++ + +L ++D+S
Sbjct: 291 LRRLDLSFCRNLTDAGLANLTP-LIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLS-- 347
Query: 386 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRN 444
I G + G + LT L +L HL NL Q +SDA L L + L HL L
Sbjct: 348 -ICGKLTDAG-----LAHLTPLVDLQHL---NLRYCQKLSDAGLAHLRSLVTLQHLDLSY 398
Query: 445 A-SLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
+LTD L L+ L+ L +LS+ R LT +GL +P +L+ LDL LT D +
Sbjct: 399 CQNLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGL 457
>gi|406835014|ref|ZP_11094608.1| hypothetical protein SpalD1_25335 [Schlesneria paludicola DSM
18645]
Length = 497
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 185/408 (45%), Gaps = 41/408 (10%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
+ ++T A + L + L L T ++ +GI L L+NL+ L L VTD LR+
Sbjct: 111 KSSQITSARLSDLSGLKNLTSLHFENTEISNEGIHELQELKNLTTLSLHTTHVTDAGLRN 170
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNLSNC 241
L+ ++KL L L G+ +S+ G L LS L+L + +L IS LE L +
Sbjct: 171 LREVSKLTTLSLSGNSISDDGFKELGELKHLSSLSLRLENIDDVQLDEISKLENLKTLSL 230
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+ SI + + K +L IN + + L LD+ N
Sbjct: 231 HVPSITDSELKQLRTVK-NLTKLFLINSK----ITDAGLKPLLDLKN------------- 272
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG 360
L LDLSS+ I D ++ + + NL +L L + G L ++ NL+ L+L+
Sbjct: 273 -LTDLDLSSTQITDAGLKEIGQL-ENLTSLYLEGCGGITDVGFRELR-NIKNLKRLALAR 329
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGF-IQQVGAETDLV-----------LSLTALQ 408
I D + + + SL+ +D+S T I IQ++G T+L L L +
Sbjct: 330 CGITDLGMKGLGQLKSLELLDLSRTPITDHGIQEIGGLTNLSTLWLLGSNITDLGLREIN 389
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFK--ELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L +L+ L L+ ++DA + L F ++HL ++ +TD L +L L KL+ +
Sbjct: 390 GLENLKELYLKSAFITDAGMKELGKFHNMNMLHL-IQCDGITDAGLKELRDLKKLSMFEL 448
Query: 467 RDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 513
+T++G+ K + L +L++ G +T + + ++ P ++
Sbjct: 449 YGCRNVTDAGIDELKEHKQLTILNV-GATQVTVSGVNKLKELLPDTQI 495
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T + L + + L L L C +TD G + L +I L++L L+ G+T G+ L
Sbjct: 282 QITDAGLKEIGQLENLTSLYLEGCGGITDVGFRELRNIKNLKRLALARCGITDLGMKGLG 341
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS--FLNL 219
L++L +LDL P+TD ++ + LT L L L GS +++ G + L +L
Sbjct: 342 QLKSLELLDLSRTPITDHGIQEIGGLTNLSTLWLLGSNITDLGLREINGLENLKELYLKS 401
Query: 220 AW---TGVTKLPNISSLECLNLSNC 241
A+ G+ +L ++ L+L C
Sbjct: 402 AFITDAGMKELGKFHNMNMLHLIQC 426
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
HL L + +QI +S +S + +L + NT+I + LQ
Sbjct: 101 HLTTLVFSNFKSSQITSARLSDLSGLKNLTSLHFENTEISNE------------GIHELQ 148
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
L +L L+L T V+DA L L +L LSL S++D +L L L++LS+R
Sbjct: 149 ELKNLTTLSLHTTHVTDAGLRNLREVSKLTTLSLSGNSISDDGFKELGELKHLSSLSLRL 208
Query: 469 AVLTNSGLGSFKPPRSLKLLDLH 491
+ + L +LK L LH
Sbjct: 209 ENIDDVQLDEISKLENLKTLSLH 231
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
N + +Q++ A L LS K L L N +++ +H+L L LT LS+ +T++GL
Sbjct: 109 NFKSSQITSARLSDLSGLKNLTSLHFENTEISNEGIHELQELKNLTTLSLHTTHVTDAGL 168
Query: 477 GSFKPPRSLKLLDLHG 492
+ + L L L G
Sbjct: 169 RNLREVSKLTTLSLSG 184
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M LG F + L++ C +T + L L + L +L C VTDAG+ L L
Sbjct: 409 MKELGKFHNMNMLHLIQCDGITDAGLKELRDLKKLSMFELYGCRNVTDAGIDELKEHKQL 468
Query: 143 EKLWLSETGLTADGIALLSSL 163
L + T +T G+ L L
Sbjct: 469 TILNVGATQVTVSGVNKLKEL 489
>gi|14423508|gb|AAK62436.1|AF386991_1 Unknown protein [Arabidopsis thaliana]
gi|20148357|gb|AAM10069.1| unknown protein [Arabidopsis thaliana]
Length = 332
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ + +L L SLN+ CR + L L+GM LK L+LS +V G+
Sbjct: 89 GMNNITNSCLVHLKGLTKLESLNLDSCR-IGDEGLVHLSGMLELKSLELSD-TEVGSNGL 146
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+HL +S LE + LS T +T G+ LS L +L L+L VTD L +L LT L +L
Sbjct: 147 RHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHL 206
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
DL+G+++++ G L+ +L L + G+T
Sbjct: 207 DLFGARITDSGTNHLRNLKKLQSLEICGGGLT 238
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 44/245 (17%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L +++NS L LT+ LE L+L S IGD+ + ++ + L++L LS+T S
Sbjct: 88 LGMNNITNSCLVHLKGLTK---LESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGS 143
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G+ L+G L NLE ++LS T + D + +S + SL+ +++ + TD
Sbjct: 144 NGLRHLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------TDA 192
Query: 401 VLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL----------------- 442
LS LT+L L HL+ L +++D+ L K+L L +
Sbjct: 193 GLSALTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLS 249
Query: 443 --------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 494
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L
Sbjct: 250 SLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCK 309
Query: 495 LLTED 499
L D
Sbjct: 310 LSAND 314
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M L LRSL + C ++T + L G+ L L+L C VT A + L +++ L
Sbjct: 1 MEPLSVLTNLRSLQIC-CSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGL 59
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L+ + G S L NL +L+LG +T+ L L+ LTKLE L+L ++ +
Sbjct: 60 MYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGD 119
Query: 203 RGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 239
G L L L L+ T G+ L +S+LE +NLS
Sbjct: 120 EGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLS 161
>gi|46447552|ref|YP_008917.1| hypothetical protein pc1918 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401193|emb|CAF24642.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 552
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L ++ + +A+L L+ LN+ C ++T + L L +T L+ LDLS C
Sbjct: 219 NLKVLHLEACQAITDDGLAHLAPLTALQHLNLNGCYKLTDAGLVHLKSLTALQTLDLSYC 278
Query: 126 VKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
+ DAG+ HL ++ L+ L L+ LT G++ L SL L LDL D L
Sbjct: 279 KNLKDAGLVHLKPLTALQNLALTSCKNLTDRGLSHLKSLTALQTLDLSYCKNFKDAGLAH 338
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L LT L+ LDL + +++RG + LK L LNL++ G+ L +++L+ L
Sbjct: 339 LPPLTALQTLDLSYCKDLTDRGLSHLKSLTALQTLNLSYCKKLKDAGLAHLKPLTALQYL 398
Query: 237 NLSNC 241
L++C
Sbjct: 399 ALNSC 403
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 33/265 (12%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F + EA+ + + L L+ L++ C+ +T L L +T
Sbjct: 184 FEKIINHFSNEIEALNFSNNAHLTDAHLLTLKNCENLKVLHLEACQAITDDGLAHLAPLT 243
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG----IALLSSLQNLSVLDL 171
L+ L+L+ C K+TDAG+ HL S++ L+ L LS D + L++LQNL++
Sbjct: 244 ALQHLNLNGCYKLTDAGLVHLKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLALTSC 303
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GV 224
L TD L L+ LT L+ LDL + + G A L L L+L++ G+
Sbjct: 304 KNL--TDRGLSHLKSLTALQTLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGL 361
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+ L ++++L+ LNLS C K+ AG + A Y+ +L S
Sbjct: 362 SHLKSLTALQTLNLSYC---------------KKLKDAGLAHLKPLTALQYL--ALNSCK 404
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLS 309
++++ LS L + AL+HL LS
Sbjct: 405 NLTDRGLSH---LKSLMALQHLVLS 426
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 116/242 (47%), Gaps = 16/242 (6%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L L++L + C+ +T L L +T L+ LDLS C DAG+ HL ++ L
Sbjct: 286 LVHLKPLTALQNLALTSCKNLTDRGLSHLKSLTALQTLDLSYCKNFKDAGLAHLPPLTAL 345
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ- 199
+ L LS LT G++ L SL L L+L + D L L+ LT L+YL L +
Sbjct: 346 QTLDLSYCKDLTDRGLSHLKSLTALQTLNLSYCKKLKDAGLAHLKPLTALQYLALNSCKN 405
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+++RG + LK L L NL G+ L +++L+ L L C + +G +
Sbjct: 406 LTDRGLSHLKSLMALQHLVLSGCDNLTDAGLAHLKPLTALQTLGLRRCQ-NLTGDGLAHL 464
Query: 254 APLAKISLAGTTFINERE----AFLYIETSL--LSFLDVSNSSLSRFCFLTQMKALEHLD 307
APL + ++ + + A L T+L L SN + + L + AL+HLD
Sbjct: 465 APLTALQTLDLSYCKKLKDAGLAHLKPLTALQTLGLKWCSNLTDAGLAHLKPLAALQHLD 524
Query: 308 LS 309
LS
Sbjct: 525 LS 526
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
L G +++ +A+L L++L + C+ +T L L +T L+ LDLS C K+ DA
Sbjct: 425 LSGCDNLTDAGLAHLKPLTALQTLGLRRCQNLTGDGLAHLAPLTALQTLDLSYCKKLKDA 484
Query: 132 GMKHLLSISTLEKL---WLSETGLTADGIALLSSLQNLSVLDL 171
G+ HL ++ L+ L W S LT G+A L L L LDL
Sbjct: 485 GLAHLKPLTALQTLGLKWCS--NLTDAGLAHLKPLAALQHLDL 525
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 175/425 (41%), Gaps = 95/425 (22%)
Query: 80 AEWMAYLGAF-RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
AE+ + F + +LN ++ +T + L L LK L L C +TD G+ HL
Sbjct: 182 AEFEKIINHFSNEIEALNFSNNAHLTDAHLLTLKNCENLKVLHLEACQAITDDGLAHLAP 241
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++ L+ L L+ G +TD L L+ LT L+ LDL S
Sbjct: 242 LTALQHLNLN-----------------------GCYKLTDAGLVHLKSLTALQTLDL--S 276
Query: 199 QVSN-RGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSLECLNLSNCTIDSILEG 249
N + A ++ + P + NLA T G++ L ++++L+ L+LS C
Sbjct: 277 YCKNLKDAGLVHLKPLTALQNLALTSCKNLTDRGLSHLKSLTALQTLDLSYCK------- 329
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
N ++A L L + AL+ LDLS
Sbjct: 330 ------------------NFKDAGL--------------------AHLPPLTALQTLDLS 351
Query: 310 SSM-IGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDY 366
+ D + + + A L+ LNLS + AG+ L L L+ L+L+ + + D
Sbjct: 352 YCKDLTDRGLSHLKSLTA-LQTLNLSYCKKLKDAGLAHLKP-LTALQYLALNSCKNLTDR 409
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
+S++ + +L+ + +S D A + LTALQ L NL T A
Sbjct: 410 GLSHLKSLMALQHLVLSGCD-----NLTDAGLAHLKPLTALQTLGLRRCQNL--TGDGLA 462
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR-DAVLTNSGLGSFKPPRSL 485
L PL+ + L LS L D L L L+ L L ++ + LT++GL KP +L
Sbjct: 463 HLAPLTALQTL-DLSYCK-KLKDAGLAHLKPLTALQTLGLKWCSNLTDAGLAHLKPLAAL 520
Query: 486 KLLDL 490
+ LDL
Sbjct: 521 QHLDL 525
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + LR ++ + +A+L L++L+++ C+++ + L L +T L+ L L C
Sbjct: 446 QTLGLRRCQNLTGDGLAHLAPLTALQTLDLSYCKKLKDAGLAHLKPLTALQTLGLKWCSN 505
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLTADGIA 158
+TDAG+ HL ++ L+ L LS LT G+A
Sbjct: 506 LTDAGLAHLKPLAALQHLDLSYCNNLTRAGLA 537
>gi|325182005|emb|CCA16458.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 708
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 190/444 (42%), Gaps = 63/444 (14%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N G + E + LG L SLN+ CR +T L++L + L+ L LS C
Sbjct: 287 NLRVANFEGCLYLKPETIQRLGFSNRLISLNLTGCRLITDKTLYSLRHLFRLQNLHLSGC 346
Query: 126 VKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALL-SSLQNLSVLDLGGLPVTDLVLRS 183
+T+ G++HL + L++L+L+ ++ +S NL LDL ++D+ L
Sbjct: 347 KWITEKGLQHLNGLFGLKRLYLARCVNVSNQAFRFFPTSFPNLVELDLSHCSISDIALHF 406
Query: 184 LQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
L ++ L L G S+++ + G++ L ++S L L++ C
Sbjct: 407 TGRLREIHSLMLKGCSRITTK-------------------GLSHLGSLSKLRRLDVRYCK 447
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQM 300
+ L ++ L + LA T F E +A + L LD+ +++ C F++ +
Sbjct: 448 HVAGL--SKEWTQLDMLKLACTEF-KEADASILATMKTLHELDLRCCLVAKGCFSFVSHL 504
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV----------------- 343
+L L ++ + + D+S+ M+ L+ L++S T + +G
Sbjct: 505 NSLVRLCVAETALTDESLIMLCKSLEKLQMLDVSCTEVTDSGTMEIEMLGELSELHLDTP 564
Query: 344 GIL------AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
GI G L L L+L + D + + + L+ +DI + G + G +
Sbjct: 565 GITNRSLERVGKLKKLARLNLFAASVTDEGVEALKRLDKLQDLDICS----GGVGHRGVK 620
Query: 398 TDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 456
AL L L LNL Q ++ ++ L +L L+L N +T LH L
Sbjct: 621 --------ALSQLKRLRSLNLSQNKEIRSQSVVHLEALTKLRFLNLSNTGITSSCLHNLF 672
Query: 457 SLSKLTNLSIRDAVLTNSGLGSFK 480
+L +L +LS+ VL +S + +
Sbjct: 673 ALKELESLSVYGVVLESSQIDELQ 696
>gi|46447589|ref|YP_008954.1| hypothetical protein pc1955 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401230|emb|CAF24679.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 454
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 29/262 (11%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F EA+ G + + L L+ L++ C+ +T L L +T
Sbjct: 186 FQRIINHFLDEIEALNFSGNAHLADAHLLALKNCENLKLLHLEACQAITDDGLAHLALLT 245
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL 174
L+ L+L CV +TDAG+ HL ++ L+ L LS +T G+A L+ L +L L+L
Sbjct: 246 SLQHLNLYFCVNLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDC 305
Query: 175 P-VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGVTK 226
+TD L L LT L YL+L ++N G A L L +LNL W G +
Sbjct: 306 ENLTDAGLAHLTPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTDAGFSH 365
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
L ++++L+ L+LS+C EN ++ AG ++ A Y+ S
Sbjct: 366 LASLTALQHLDLSDC---------EN------LTDAGLAYLASLTALQYLGLS-----QC 405
Query: 287 SNSSLSRFCFLTQMKALEHLDL 308
N + LT + AL+HLDL
Sbjct: 406 RNLTDVGLAHLTPLTALQHLDL 427
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 21/212 (9%)
Query: 39 AHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVA 98
AHLAD+ HL+ + N + + L ++ + +A+L L+ LN+
Sbjct: 206 AHLADA---HLLALKNC---------ENLKLLHLEACQAITDDGLAHLALLTSLQHLNLY 253
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGI 157
C +T + L LT +T L+ L+LS C K+TDAG+ HL ++ L+ L LS+ LT G+
Sbjct: 254 FCVNLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGL 313
Query: 158 ALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLS 215
A L+ L L L+L +T++ L L LT L+YL+L W +++ G + L L
Sbjct: 314 AHLTPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTDAGFSHLASLTALQ 373
Query: 216 FL------NLAWTGVTKLPNISSLECLNLSNC 241
L NL G+ L ++++L+ L LS C
Sbjct: 374 HLDLSDCENLTDAGLAYLASLTALQYLGLSQC 405
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN DA +AYL + L+ L ++ CR +T L LT +T L+ LDL C KVTDAG+
Sbjct: 381 ENLTDA-GLAYLASLTALQYLGLSQCRNLTDVGLAHLTPLTALQHLDLRECDKVTDAGLA 439
Query: 135 HLLSIST 141
+++T
Sbjct: 440 RFKTLAT 446
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA + ++L + L+ L+++DC +T + L L +T L+ L LS+C +TD G+ H
Sbjct: 357 NLTDAGF-SHLASLTALQHLDLSDCENLTDAGLAYLASLTALQYLGLSQCRNLTDVGLAH 415
Query: 136 LLSISTLEKLWLSETGLTAD-GIALLSSL 163
L ++ L+ L L E D G+A +L
Sbjct: 416 LTPLTALQHLDLRECDKVTDAGLARFKTL 444
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 68/299 (22%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-T 150
+ +LN + + + L AL LK L L C +TD G+ HL +++L+ L L
Sbjct: 197 IEALNFSGNAHLADAHLLALKNCENLKLLHLEACQAITDDGLAHLALLTSLQHLNLYFCV 256
Query: 151 GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL 208
LT G+A L+ L L L+L +TD L L LT L++L+L + +++ G A L
Sbjct: 257 NLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHL 316
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 268
L +LNL+ +C +L+N G + APL G ++N
Sbjct: 317 TPLTALLYLNLS-------------KCYHLTNV-------GLAHLAPLT-----GLQYLN 351
Query: 269 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 328
+ + N + + F L + AL+HLDLS
Sbjct: 352 LKWCW--------------NLTDAGFSHLASLTALQHLDLSDC----------------- 380
Query: 329 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTD 386
+ AG+ LA L L+ L LS + + D +++++ + +L+ +D+ D
Sbjct: 381 -------ENLTDAGLAYLAS-LTALQYLGLSQCRNLTDVGLAHLTPLTALQHLDLRECD 431
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 352 NLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
NL++L L Q I D +++++++ SL+ +++ + A + LTALQ
Sbjct: 221 NLKLLHLEACQAITDDGLAHLALLTSLQHLNL-----YFCVNLTDAGLAHLTPLTALQ-- 273
Query: 411 NHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD 468
LNL +++DA L L+ +L HL+L + +LTD L L+ L+ L L++
Sbjct: 274 ----HLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHLTPLTALLYLNLSK 329
Query: 469 AV-LTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
LTN GL P L+ L+L W LT+
Sbjct: 330 CYHLTNVGLAHLAPLTGLQYLNLKWCWNLTD 360
>gi|168698162|ref|ZP_02730439.1| hypothetical protein GobsU_01482 [Gemmata obscuriglobus UQM 2246]
Length = 295
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 121/266 (45%), Gaps = 21/266 (7%)
Query: 92 LRSLNVADC--RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L++LN D +VT + L AL +T L L L VTDAG+K L+ +L+ L+L
Sbjct: 47 LKNLNTLDLGKTKVTDAGLKALAPLTGLTRLALGDT-GVTDAGLKELVPFKSLKTLYLFS 105
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
T +T G+ L +NL+VL LGG VTD LR L L L L G+ V++ G L
Sbjct: 106 TKVTDAGLKELGRFKNLTVLGLGGTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELA 165
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
L+ L L TGV + NL+ + S K++ AG + E
Sbjct: 166 PLKNLTELGLGGTGVADVGLKELAPFKNLAKLDLYS-----------TKVTDAG---LKE 211
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
+ L V++ L LT +KAL L L + + D ++ +A + NL
Sbjct: 212 LGLLKNLTLLDLGRTQVTDDGLRE---LTGLKALTTLILIGTGVTDAGLKELAGL-TNLT 267
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEI 355
LNL T+ + AG L LP EI
Sbjct: 268 RLNLYRTKVTDAGWKELKSALPKCEI 293
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 145/352 (41%), Gaps = 79/352 (22%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R ++VTDAG+K L ++ L +L L T +T G+ L+ L+NL+ LDLG VTD L++
Sbjct: 8 RDLQVTDAGLKELAGLTNLTQLILLGTAVTDVGLEELAPLKNLNTLDLGKTKVTDAGLKA 67
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 243
L LT L L L + V++ G L F L L L T VT + E N T+
Sbjct: 68 LAPLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKVT---DAGLKELGRFKNLTV 124
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L GT D L RF LT
Sbjct: 125 ---------------LGLGGT-----------------GVTDAGLRELGRFKNLTA---- 148
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
L LS T + AG+ LA L NL L L GT +
Sbjct: 149 ---------------------------LGLSGTGVTDAGLKELA-PLKNLTELGLGGTGV 180
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
D + ++ +L +D+ +T + TD L L L +L L+L +TQV
Sbjct: 181 ADVGLKELAPFKNLAKLDLYSTKV----------TD--AGLKELGLLKNLTLLDLGRTQV 228
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
+D L L+ K L L L +TD L +L+ L+ LT L++ +T++G
Sbjct: 229 TDDGLRELTGLKALTTLILIGTGVTDAGLKELAGLTNLTRLNLYRTKVTDAG 280
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
L V+++ L LT L L L + + D +E +A + NL L+L T+ + AG+
Sbjct: 10 LQVTDAGLKELAGLTN---LTQLILLGTAVTDVGLEELAPL-KNLNTLDLGKTKVTDAGL 65
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
LA L L L+L T + D + + SLK + + +T + TD
Sbjct: 66 KALA-PLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKV----------TDA--G 112
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L +L L L T V+DA L L FK L L L +TD L +L+ L LT
Sbjct: 113 LKELGRFKNLTVLGLGGTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTE 172
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
L + + + GL P ++L LDL+
Sbjct: 173 LGLGGTGVADVGLKELAPFKNLAKLDLY 200
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G+ V + L F+ L++L + + VT + L L L L L VTDAG+
Sbjct: 80 GDTGVTDAGLKELVPFKSLKTLYLFSTK-VTDAGLKELGRFKNLTVLGLG-GTGVTDAGL 137
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L L L LS TG+T G+ L+ L+NL+ L LGG V D+ L+ L L L
Sbjct: 138 RELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGGTGVADVGLKELAPFKNLAKL 197
Query: 194 DLWGSQVSNRG 204
DL+ ++V++ G
Sbjct: 198 DLYSTKVTDAG 208
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL L L T + G+ LA L NL L L T++ D + ++ + L + + +T
Sbjct: 25 NLTQLILLGTAVTDVGLEELA-PLKNLNTLDLGKTKVTDAGLKALAPLTGLTRLALGDTG 83
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ TD L L L+ L L T+V+DA L L FK L L L
Sbjct: 84 V----------TDA--GLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLGLGGTG 131
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+TD L +L LT L + +T++GL P ++L L L G
Sbjct: 132 VTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGG 177
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 55/318 (17%)
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
L VTD L+ L LT L L L G+ V++ G L L+ L+L T VT + L
Sbjct: 10 LQVTDAGLKELAGLTNLTQLILLGTAVTDVGLEELAPLKNLNTLDLGKTKVTD----AGL 65
Query: 234 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
+ L APL ++ R A L V+++ L
Sbjct: 66 KAL-----------------APLTGLT---------RLA--------LGDTGVTDAGLKE 91
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
L K+L+ L L S+ + D ++ + NL L L T + AG+ L G NL
Sbjct: 92 ---LVPFKSLKTLYLFSTKVTDAGLKELGRF-KNLTVLGLGGTGVTDAGLREL-GRFKNL 146
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
L LSGT + D + ++ + +L + + T + VG L L +L
Sbjct: 147 TALGLSGTGVTDAGLKELAPLKNLTELGLGGTGV----ADVG--------LKELAPFKNL 194
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
+L+L T+V+DA L L K L L L +TD L +L+ L LT L + +T+
Sbjct: 195 AKLDLYSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGVTD 254
Query: 474 SGLGSFKPPRSLKLLDLH 491
+GL +L L+L+
Sbjct: 255 AGLKELAGLTNLTRLNLY 272
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N A+ L G DA + L + L L + V L L L +LDL
Sbjct: 144 KNLTALGLSGTGVTDA-GLKELAPLKNLTELGLGGTG-VADVGLKELAPFKNLAKLDL-Y 200
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
KVTDAG+K L + L L L T +T DG+ L+ L+ L+ L L G VTD L+ L
Sbjct: 201 STKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGVTDAGLKEL 260
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLK 209
LT L L+L+ ++V++ G LK
Sbjct: 261 AGLTNLTRLNLYRTKVTDAGWKELK 285
>gi|219122964|ref|XP_002181805.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407081|gb|EEC47019.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 486
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 202/474 (42%), Gaps = 65/474 (13%)
Query: 37 LPAHLADSLLRHLIRRRLIFPSLLEVFKHNAE--AIELRGENSVDAEWMAYLGAFR---- 90
LP + D +L+ LIR + + L + + N E + L G V EW+ L A
Sbjct: 1 LPQDVVDDILQSLIRHSALNATTLRILR-NCELGVLSLSGCRGVTDEWLEALSAESSDSP 59
Query: 91 -YLRS------------------LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
+LR+ L++ +R+T L L + L+ L C V
Sbjct: 60 PHLRTALMWHPCAASSALTNTTLLDLRGSQRLTDRGLMQLHDLGRLEVAKLDNCHSVVGR 119
Query: 132 GMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTK 189
G+ L S L L L+ LT + I +S LQ+L L L G +TD L +L +
Sbjct: 120 GLVVLSSSPRLHTLSLTNCRRLTDEAIVNISHLQSLQALSLDGCRCITDFSLAALADMYN 179
Query: 190 LEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE 248
L L L ++N G L+ RL ++L W C +S+ I ++
Sbjct: 180 LRKLGLSQCDLITNEGLKALEHLQRLQEISLGW-------------CRQVSDAGIQTLTA 226
Query: 249 GNENKAPLAKISLAGTTFINEREAFL----YIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
+ L + LA +E +L ++T L + V + L++ L + LE
Sbjct: 227 QPGRSSNLQILRLARCPITDEGVQYLGKIRNVKTLELCYSAVKDIHLTK---LVNLPMLE 283
Query: 305 HLDLSSSMIGDDSVEMVA--CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
L+L S IGD +++ A V NL +L+L+++ S G+ +A L+ LSL
Sbjct: 284 ELNLDSCPIGDLAIQHFANHNVLPNLVSLDLADSDISDLGMVQIA-KFTKLKRLSLFYCS 342
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
I + + ++S++ L+ +++ + DI L LQ+L L+ L++ +
Sbjct: 343 ISNRGLRHLSILTELRVLNLDSRDISDD------------GLRHLQHLKQLKSLDIFSGR 390
Query: 423 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-RDAVLTNSG 475
V+D LS K L L L + D L+ L LT+L++ ++ +TN G
Sbjct: 391 VTDLGCTYLSKIKTLESLELCGGGVRDAGCASLAKLENLTSLNLSQNERITNRG 444
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 171/391 (43%), Gaps = 47/391 (12%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLP 175
L L LS C VTD ++ L + S+ L T L A S+L N ++LDL G
Sbjct: 32 LGVLSLSGCRGVTDEWLEALSAESSDSPPHL-RTALMWHPCAASSALTNTTLLDLRGSQR 90
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+TD L L L +LE L V RG VL PRL L+L
Sbjct: 91 LTDRGLMQLHDLGRLEVAKLDNCHSVVGRGLVVLSSSPRLHTLSLT-------------N 137
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 294
C L++ I +I + L +SL G I + + +L ++ LS+
Sbjct: 138 CRRLTDEAIVNI----SHLQSLQALSLDGCRCITD-----FSLAALADMYNLRKLGLSQC 188
Query: 295 CFLTQ--MKALEHLDLSSSM-------IGDDSVEMVACV---GANLRNLNLSNTRFSSAG 342
+T +KALEHL + + D ++ + +NL+ L L+ + G
Sbjct: 189 DLITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQILRLARCPITDEG 248
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
V L G + N++ L L + + D ++ + +P L+ +++ + I Q A +++
Sbjct: 249 VQYL-GKIRNVKTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIGDLAIQHFANHNVLP 307
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
+L +L +L + +SD + ++ F +L LSL S+++ L LS L++L
Sbjct: 308 NLVSL---------DLADSDISDLGMVQIAKFTKLKRLSLFYCSISNRGLRHLSILTELR 358
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
L++ +++ GL + + LK LD+ G
Sbjct: 359 VLNLDSRDISDDGLRHLQHLKQLKSLDIFSG 389
>gi|421897032|ref|ZP_16327415.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
gi|206588197|emb|CAQ18765.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
Length = 625
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 174/398 (43%), Gaps = 31/398 (7%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK--VTDAGMKHL 136
D A+LG + L S+ +T AL AL ++ LD+SRC V++AG+ HL
Sbjct: 129 DPAMFAHLGKYPALTSVRFKG--ELTLEALKALP--PGVEHLDISRCTGRGVSNAGLAHL 184
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+ L+ L L+ + A+G LL++ +L+ L L G + D +L + LDL
Sbjct: 185 -ATRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQSRSIASLDLS 243
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGN 250
+ + GA L P LS LNL G+ L +L+ LN SN I D+ + G
Sbjct: 244 VNMIGPDGARALASAPLLS-LNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGF 302
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDL 308
+ L +++LAG I A + L+ LD+S + L L ++L L+L
Sbjct: 303 ADNTVLTQLNLAG-NMIGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNL 361
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ IGDD E +A L++LNLS G G L G L L L ID Y
Sbjct: 362 RHNEIGDDGTEALA-RNTTLKSLNLSYNPIGFWGAGALGGST-TLRELDLRCCAIDPYGA 419
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
S ++ SL + + + I GA AL L L+L + + DA
Sbjct: 420 SALARNTSLASLHLGSNRIG----DDGAR--------ALATSRTLTLLDLSRNNIHDAGA 467
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L+ L L+L + D L+ +LT+L++
Sbjct: 468 QALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNL 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
AL G T L+ELDL RC + G L ++L L L + DG L++ + L++L
Sbjct: 397 ALGGSTTLRELDL-RCCAIDPYGASALARNTSLASLHLGSNRIGDDGARALATSRTLTLL 455
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGV 224
DL + D ++L L L+L+G++V + GAA L PRL+ LNL G
Sbjct: 456 DLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNLGRNRIGPNGA 515
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNEN---KAPLAKISLAGTTFINEREAFLYIETSL- 280
L ++L L+LS I EG E L ++++G I E+ A + E S
Sbjct: 516 QHLAKSATLTELDLSENRIGP--EGAEALSLSTVLTTLNVSGNA-IGEKGARAFAEKSTS 572
Query: 281 LSFLDVSNS 289
L+ LD N+
Sbjct: 573 LTSLDARNN 581
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 33/267 (12%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ D G L + TL+ L S G+ G+ + L+ L+L G + R+L+
Sbjct: 270 IGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALRRN 329
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 242
T L LDL +++ + GA VL L+ LNL G L ++L+ LNLS
Sbjct: 330 TSLTELDLSTNRLGDAGAQVLAGSRSLTSLNLRHNEIGDDGTEALARNTTLKSLNLSYNP 389
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQM 300
I G +L G+T + E LD+ ++ + L +
Sbjct: 390 IGFWGAG----------ALGGSTTLRE--------------LDLRCCAIDPYGASALARN 425
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+L L L S+ IGDD +A L L+LS AG LAG+ +L L+L G
Sbjct: 426 TSLASLHLGSNRIGDDGARALATS-RTLTLLDLSRNNIHDAGAQALAGN-GSLTSLNLYG 483
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDI 387
++DD + ++ P L +++ I
Sbjct: 484 NEVDDDGAAALAQHPRLTSLNLGRNRI 510
>gi|87309359|ref|ZP_01091495.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
gi|87287998|gb|EAQ79896.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
Length = 351
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 32/274 (11%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
+DLSR V TD + L TL KL L + G+T + + L+ L L LD+ G+ +T
Sbjct: 55 MDLSRVV-ATDVDFRGLGEAVTLRKLSLQDVGMTDESASELAPLTKLQSLDMRGVSITGE 113
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLE 234
L+SL LT+LE L G + + A L +L L L T G+ L N L+
Sbjct: 114 ALQSLGQLTELERLLFRGQPIRDADLAQLAPLTKLKVLGLDDTDASAGGLEHLQNAHDLK 173
Query: 235 CLNLSNC-TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
L L N T+D L LAK+ L G+ DV+ S ++
Sbjct: 174 ELYLFNTPTVDEELAVLTKFPALAKLRLRGS--------------------DVTGSGMAE 213
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
L ++ +LE LD+S + + D +A + L +LNL T+ + A + LA L L
Sbjct: 214 ---LAKIGSLEDLDVSETKVDDAGAAEIAKL-PKLTDLNLWKTKVTDASLPDLA-KLTTL 268
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
E L+L + D ++ ++ MP+LK++ + +T +
Sbjct: 269 ERLNLDANDLTDANLALLAAMPNLKWLHLGSTSV 302
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L LT L +L L R VT +GM L I +LE L +SET + G A ++ L L+
Sbjct: 187 LAVLTKFPALAKLRL-RGSDVTGSGMAELAKIGSLEDLDVSETKVDDAGAAEIAKLPKLT 245
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-- 225
L+L VTD L L LT LE L+L + +++ A+L P L +L+L T VT
Sbjct: 246 DLNLWKTKVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTSVTDA 305
Query: 226 ---KLPNISSLECLNLSNCTI 243
+L SLE L ++ +
Sbjct: 306 GILELAKSKSLETLIVTRTKV 326
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+++++RG S+ E + LG L L + + + + L L +T LK L L
Sbjct: 101 QSLDMRG-VSITGEALQSLGQLTELERL-LFRGQPIRDADLAQLAPLTKLKVLGLDDT-D 157
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ G++HL + L++L+L T + +A+L+ L+ L L G VT + L +
Sbjct: 158 ASAGGLEHLQNAHDLKELYLFNTPTVDEELAVLTKFPALAKLRLRGSDVTGSGMAELAKI 217
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDS 245
LE LD+ ++V + GAA + P+L+ LNL T VT LP+++ L L N +
Sbjct: 218 GSLEDLDVSETKVDDAGAAEIAKLPKLTDLNLWKTKVTDASLPDLAKLTTLERLNLDAND 277
Query: 246 ILEGN 250
+ + N
Sbjct: 278 LTDAN 282
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMI 313
L K+SL +E + L T L S LD+ S++ L Q+ LE L I
Sbjct: 76 LRKLSLQDVGMTDESASELAPLTKLQS-LDMRGVSITGEALQSLGQLTELERLLFRGQPI 134
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN---LEILSLSGTQIDDYAISY 370
D + +A + L+ L L +T S+ G+ HL N L+ L L T D ++
Sbjct: 135 RDADLAQLAPL-TKLKVLGLDDTDASAGGLE----HLQNAHDLKELYLFNTPTVDEELAV 189
Query: 371 MSMMPSLKFIDISNTDIKGF----IQQVGAETDLVLSLTALQN--------LNHLERLNL 418
++ P+L + + +D+ G + ++G+ DL +S T + + L L LNL
Sbjct: 190 LTKFPALAKLRLRGSDVTGSGMAELAKIGSLEDLDVSETKVDDAGAAEIAKLPKLTDLNL 249
Query: 419 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 478
+T+V+DA+L L+ L L+L LTD +L L+++ L L + +T++G+
Sbjct: 250 WKTKVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTSVTDAGILE 309
Query: 479 FKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
+SL+ L + +T+D F + P I + H
Sbjct: 310 LAKSKSLETL-IVTRTKVTDDGAAAFAAIAPNITLQH 345
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
FP+L + + LRG + V MA L L L+V++ + V + + +
Sbjct: 193 FPALAK--------LRLRGSD-VTGSGMAELAKIGSLEDLDVSETK-VDDAGAAEIAKLP 242
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L +L+L + KVTDA + L ++TLE+L L LT +ALL+++ NL L LG
Sbjct: 243 KLTDLNLWKT-KVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTS 301
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
VTD + L LE L + ++V++ G
Sbjct: 302 VTDAGILELAKSKSLETLIVTRTKVTDDG 330
>gi|348688896|gb|EGZ28710.1| hypothetical protein PHYSODRAFT_322345 [Phytophthora sojae]
Length = 683
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 197/434 (45%), Gaps = 67/434 (15%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNV--ADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ LRG + V + L ++L +LN+ A+ +T + AL G+T L L+LS C +
Sbjct: 258 LSLRGCSQVGDIGIRELARLKHLTTLNLWYANQGNLTDDGISALAGVTSLTSLNLSNCSQ 317
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+TD G+ L ++ L L + G VTD L++L L
Sbjct: 318 LTDVGISSLGALVNLRHLEFANVG-----------------------EVTDNGLKALAPL 354
Query: 188 TKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSN 240
L LD+ G +++ G +VL FP LS NL + T + +++ + LN
Sbjct: 355 VDLITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLNFMK 414
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C K++ G I++ ++ ++S +V++ L+ L ++
Sbjct: 415 C---------------GKVTDKGLRSISKLRNLTSLD--MVSCFNVTDDGLNELVGLHRL 457
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL-S 359
K+L +L S I DD + ++ + +L L+LSN R + G L NL L+L
Sbjct: 458 KSL-YLG-GCSGIRDDGIAALSQL-KSLVILDLSNCRQVGNKALLGLGELHNLTNLNLMR 514
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL- 418
+IDD I+Y++ + LK +++SN + TD + T + + LE + L
Sbjct: 515 CNRIDDEGIAYLAGLKRLKTLNLSNCRLL---------TD--AATTTIAQMTELESIVLW 563
Query: 419 EQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRD-AVLTNSGL 476
+++D + L++ +L + L + S LTD L S+ KLT+L + + +LT+ G+
Sbjct: 564 YCNKLTDTGVMNLASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGM 623
Query: 477 GSFKPPRSLKLLDL 490
+ SL L+L
Sbjct: 624 ATLGKVTSLTSLNL 637
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
HN + L N +D E +AYL + L++LN+++CR +T +A + MT L+ + L
Sbjct: 505 HNLTNLNLMRCNRIDDEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWY 564
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLR 182
C K+TD G+ +L S++ L+ + L+ + LT ++ S+ L+ LDLG +TD +
Sbjct: 565 CNKLTDTGVMNLASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMA 624
Query: 183 SLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 228
+L +T L L+L ++++ G A L L+ +NL + TG+ LP
Sbjct: 625 TLGKVTSLTSLNLSECGEITDAGLAHLAALVNLTNINLWYCTKVTKTGIDHLP 677
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 132/286 (46%), Gaps = 27/286 (9%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
++ + +R LN C +VT L +++ + L LD+ C VTD G+ L+ + L+
Sbjct: 400 HMESLTKMRFLNFMKCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNELVGLHRLKS 459
Query: 145 LWLSE-TGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLW-GSQVS 201
L+L +G+ DGIA LS L++L +LDL V + L L L L L+L +++
Sbjct: 460 LYLGGCSGIRDDGIAALSQLKSLVILDLSNCRQVGNKALLGLGELHNLTNLNLMRCNRID 519
Query: 202 NRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCT--IDSILEGNENK 253
+ G A L RL LNL+ T + ++ LE + L C D+ G N
Sbjct: 520 DEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKLTDT---GVMNL 576
Query: 254 APLAK---ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL---SRFCFLTQMKALEHLD 307
A L K I LA + + + + L+ LD+ N L L ++ +L L+
Sbjct: 577 ASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATLGKVTSLTSLN 636
Query: 308 LS-SSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLP 351
LS I D + +A + NL N+NL T+ + G+ HLP
Sbjct: 637 LSECGEITDAGLAHLAAL-VNLTNINLWYCTKVTKTGI----DHLP 677
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
H +++ L G + + + +A L + L L++++CR+V + AL L + L L+L R
Sbjct: 455 HRLKSLYLGGCSGIRDDGIAALSQLKSLVILDLSNCRQVGNKALLGLGELHNLTNLNLMR 514
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADG----IALLSSLQNLSVLDLGGLPVTDLV 180
C ++ D G+ +L + L+ L LS L D IA ++ L+++ + L TD
Sbjct: 515 CNRIDDEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKL--TDTG 572
Query: 181 LRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSL 233
+ +L LTKL+ +DL S++++ + P+L+ L+L G+ L ++SL
Sbjct: 573 VMNLASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATLGKVTSL 632
Query: 234 ECLNLSNC 241
LNLS C
Sbjct: 633 TSLNLSEC 640
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 195/471 (41%), Gaps = 98/471 (20%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGL 174
LKE++L+ C +TD ++ L I +E + L D IAL SL + G
Sbjct: 177 LKEVNLTGCSNLTDESVEQLAQIPRMESIALKGCYQVTDKGIIALTESLSSSLTSLNLGY 236
Query: 175 P--VTDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 222
V+D + ++ L KL YL L G SQV + G L L+ LNL +
Sbjct: 237 CKVVSDEAVSAIAANLPKLNYLSLRGCSQVGDIGIRELARLKHLTTLNLWYANQGNLTDD 296
Query: 223 GVTKLPNISSLECLNLSNCT--------------------IDSILEGNENK----APLAK 258
G++ L ++SL LNLSNC+ ++ E +N APL
Sbjct: 297 GISALAGVTSLTSLNLSNCSQLTDVGISSLGALVNLRHLEFANVGEVTDNGLKALAPLVD 356
Query: 259 ---ISLAGTTFINEREAFLYIETSLLSFL------DVSNSSLSRFCFLTQMKALEHLDLS 309
+ +AG I + + LS ++ +++ LT+M+ L +
Sbjct: 357 LITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLNF--MK 414
Query: 310 SSMIGDDSVEMVACVGANLRNLN----LSNTRFSSAGVGILAGHLPNLEILSLSG-TQID 364
+ D + + + LRNL +S + G+ L G L L+ L L G + I
Sbjct: 415 CGKVTDKGLRSI----SKLRNLTSLDMVSCFNVTDDGLNELVG-LHRLKSLYLGGCSGIR 469
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQV 423
D I+ +S + SL +D+SN +QVG + +L L L++L LNL + ++
Sbjct: 470 DDGIAALSQLKSLVILDLSN------CRQVGNK-----ALLGLGELHNLTNLNLMRCNRI 518
Query: 424 SDATLFPLSTFKELIHLSLRNA--------------------------SLTDVSLHQLSS 457
D + L+ K L L+L N LTD + L+S
Sbjct: 519 DDEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKLTDTGVMNLAS 578
Query: 458 LSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
L+KL ++ + + LT++ L +F L LDL LLT++ + K+
Sbjct: 579 LTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATLGKV 629
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 160/374 (42%), Gaps = 48/374 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ LGA LR L A+ VT + L AL + L LD++ C +TDAG L + L
Sbjct: 323 ISSLGALVNLRHLEFANVGEVTDNGLKALAPLVDLITLDIAGCYNITDAGTSVLANFPNL 382
Query: 143 E--KLW-LSETG-LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
LW SE G T + + L+ ++ L+ + G VTD LRS+ L L LD+
Sbjct: 383 SSCNLWYCSEIGDTTFEHMESLTKMRFLNFMKCG--KVTDKGLRSISKLRNLTSLDMVSC 440
Query: 199 -QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNE 251
V++ G L RL L L G+ L + SL L+LSNC
Sbjct: 441 FNVTDDGLNELVGLHRLKSLYLGGCSGIRDDGIAALSQLKSLVILDLSNC------RQVG 494
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
NKA L L T +N L+ + + ++ +L +K L+ L+LS+
Sbjct: 495 NKALLGLGELHNLTNLN-----------LMRCNRIDDEGIA---YLAGLKRLKTLNLSNC 540
Query: 312 MIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYAIS 369
+ D+ L ++ L + + GV LA L L+ + L S +++ D +S
Sbjct: 541 RLLTDAATTTIAQMTELESIVLWYCNKLTDTGVMNLAS-LTKLQSIDLASCSKLTDACLS 599
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATL 428
+P L +D+ N + G T L + L LNL E +++DA L
Sbjct: 600 TFPSIPKLTSLDLGNC---CLLTDEGMAT--------LGKVTSLTSLNLSECGEITDAGL 648
Query: 429 FPLSTFKELIHLSL 442
L+ L +++L
Sbjct: 649 AHLAALVNLTNINL 662
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 15/188 (7%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +E V + L L +L++A C +T + L L +L C
Sbjct: 331 NLRHLEFANVGEVTDNGLKALAPLVDLITLDIAGCYNITDAGTSVLANFPNLSSCNLWYC 390
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDL-GGLPVTDLVLRS 183
++ D +H+ S++ + L + G D G+ +S L+NL+ LD+ VTD L
Sbjct: 391 SEIGDTTFEHMESLTKMRFLNFMKCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNE 450
Query: 184 LQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNL---------AWTGVTKLPNISSL 233
L L +L+ L L G S + + G A L L L+L A G+ +L N+++
Sbjct: 451 LVGLHRLKSLYLGGCSGIRDDGIAALSQLKSLVILDLSNCRQVGNKALLGLGELHNLTN- 509
Query: 234 ECLNLSNC 241
LNL C
Sbjct: 510 --LNLMRC 515
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 39/223 (17%)
Query: 317 SVEMVACVGANLRNLNLSNTRFSS--AGVGI--LA--GHLPNLEILSLSGTQIDDYAISY 370
S E V+ + ANL LN + R S +GI LA HL L + + + D IS
Sbjct: 241 SDEAVSAIAANLPKLNYLSLRGCSQVGDIGIRELARLKHLTTLNLWYANQGNLTDDGISA 300
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT--------- 421
++ + SL +++SN + VG + SL AL NL HLE N+ +
Sbjct: 301 LAGVTSLTSLNLSNC---SQLTDVG-----ISSLGALVNLRHLEFANVGEVTDNGLKALA 352
Query: 422 --------------QVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLS- 465
++DA L+ F L +L S + D + + SL+K+ L+
Sbjct: 353 PLVDLITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLNF 412
Query: 466 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 508
++ +T+ GL S R+L LD+ + +T+D + + +H
Sbjct: 413 MKCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNELVGLH 455
>gi|168701212|ref|ZP_02733489.1| hypothetical protein GobsU_16936 [Gemmata obscuriglobus UQM 2246]
Length = 410
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 150/353 (42%), Gaps = 68/353 (19%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT L L G L L L+ +TDAG+KHL ++ L L L T + G S
Sbjct: 114 VTDQKLAELAGQPNLVVLRLN-GASITDAGLKHLAALDGLSALSLHGT---SRGATSAGS 169
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
+ +TD L L+ + L L L G +V++ GA L P+L L L T
Sbjct: 170 YRG----------ITDAGLNELRAIKGLTDLSLGGIEVTDAGARTLATMPQLRVLGLEGT 219
Query: 223 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
+T D+ LE N APL +++ TF +A L
Sbjct: 220 KIT------------------DAALE---NLAPLTELTEIDLTFTKVTDAGL-------- 250
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
L+RF LT+++ LSS+ + D V +A + L +L+LS T+ G
Sbjct: 251 ------KHLARFKKLTRVR------LSSTAVTDAGVRELAAL-PELTDLDLSYTKAGDGG 297
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
V LA L +SL T++ D ++ P L +++ T +VG D V
Sbjct: 298 VTALAAAPNRLTSVSLEKTRVGDEGAKALAAAPGLTRLNLGYT-------RVG--DDGVS 348
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
+L A NL L L T+V+D + L ++L ++ LR +TD ++ +L
Sbjct: 349 ALAAAPNLTGL---TLVATRVTDDGVRSLFACRKLAYVELRETEVTDGAIREL 398
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 100/251 (39%), Gaps = 58/251 (23%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
R +T + L L + L +L L ++VTDAG + L ++ L L L T +T + L
Sbjct: 171 RGITDAGLNELRAIKGLTDLSLG-GIEVTDAGARTLATMPQLRVLGLEGTKITDAALENL 229
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ L L+ +DL VTD L+ L KL + L + V++ G L P L+ L+L+
Sbjct: 230 APLTELTEIDLTFTKVTDAGLKHLARFKKLTRVRLSSTAVTDAGVRELAALPELTDLDLS 289
Query: 221 WT-----GVTKL---PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 272
+T GVT L PN L++ +++ G+E LA
Sbjct: 290 YTKAGDGGVTALAAAPN-------RLTSVSLEKTRVGDEGAKALA--------------- 327
Query: 273 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 332
L L+L + +GDD V +A NL L
Sbjct: 328 --------------------------AAPGLTRLNLGYTRVGDDGVSALAAA-PNLTGLT 360
Query: 333 LSNTRFSSAGV 343
L TR + GV
Sbjct: 361 LVATRVTDDGV 371
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD--------IKGF------- 390
LAG PNL +L L+G I D + +++ + L + + T +G
Sbjct: 122 LAGQ-PNLVVLRLNGASITDAGLKHLAALDGLSALSLHGTSRGATSAGSYRGITDAGLNE 180
Query: 391 IQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
++ + TDL L L + L L LE T+++DA L L+ EL + L
Sbjct: 181 LRAIKGLTDLSLGGIEVTDAGARTLATMPQLRVLGLEGTKITDAALENLAPLTELTEIDL 240
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+TD L L+ KLT + + +T++G+
Sbjct: 241 TFTKVTDAGLKHLARFKKLTRVRLSSTAVTDAGV 274
>gi|301118238|ref|XP_002906847.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108196|gb|EEY66248.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 187/421 (44%), Gaps = 40/421 (9%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVK 127
+ LRG + V + L + L++LN+ C + +T + AL +T L L+LS C +
Sbjct: 223 LNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDGGISALAEVTSLTSLNLSNCSQ 282
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQ 185
+TD G+ L ++ L L ++ G +T G L+ L NL LD+ G +TD L
Sbjct: 283 LTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLV 342
Query: 186 VLTKLEYLDLW-GSQVSNRGAAVLKMFPRLSFLNLAWTG---------VTKLPNISSLE- 234
KL +LW S++ + ++ ++ FLN G + KL N++SL+
Sbjct: 343 NFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCGKVTDRGLRSIAKLRNLTSLDM 402
Query: 235 --CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
C N+++ ++ + + N L + L G + I + S L LD+SN
Sbjct: 403 VSCFNVTDEGLNELSKLNR----LKSLYLGGCSGIRDEGIAALSHLSSLVILDLSNCRQV 458
Query: 293 RFCFLTQMKALEHLD----LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
L + AL +L + + I DD + +A + L+ LNL+N R +
Sbjct: 459 GNKALLGIGALRNLTNLNLMRCNRIDDDGIAHLAGL-TRLKTLNLANCRLLTDRATKTVA 517
Query: 349 HLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 407
+ LE L L ++ D I +S + L+ ID++ TD SL A
Sbjct: 518 QMTGLESLVLWYCNKLTDAGILNLSTLTKLQSIDLA---------SCSKLTD--ASLEAF 566
Query: 408 QNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLS 465
N+ +L L+L +SD + LS L L+L +TD L L +L L++++
Sbjct: 567 LNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLTSLNLSECGEITDTGLEHLKTLVNLSSVN 626
Query: 466 I 466
+
Sbjct: 627 L 627
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N +D + +A+L L++LN+A+CR +T A + MT L+ L L C K+TDAG+ +
Sbjct: 481 NRIDDDGIAHLAGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKLTDAGILN 540
Query: 136 LLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYL 193
L +++ L+ + L+ + LT + ++ NL+ LDLG ++D + +L +T L L
Sbjct: 541 LSTLTKLQSIDLASCSKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLTSL 600
Query: 194 DL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 228
+L ++++ G LK LS +NL + G+ LP
Sbjct: 601 NLSECGEITDTGLEHLKTLVNLSSVNLWYCTKVTPVGINFLP 642
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 13/185 (7%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+++ L G + + E +A L L L++++CR+V + AL + + L L+L RC +
Sbjct: 423 KSLYLGGCSGIRDEGIAALSHLSSLVILDLSNCRQVGNKALLGIGALRNLTNLNLMRCNR 482
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTAD----GIALLSSLQNLSVLDLGGLPVTDLVLRS 183
+ D G+ HL ++ L+ L L+ L D +A ++ L++L + L TD + +
Sbjct: 483 IDDDGIAHLAGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKL--TDAGILN 540
Query: 184 LQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECL 236
L LTKL+ +DL S++++ P L+ L+L G+ L ++SL L
Sbjct: 541 LSTLTKLQSIDLASCSKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLTSL 600
Query: 237 NLSNC 241
NLS C
Sbjct: 601 NLSEC 605
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 205/470 (43%), Gaps = 96/470 (20%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQ--NLSVLDLGG 173
LKE++L+ C +TD ++ L ++S L + L +T I LL+ Q +L+ ++LG
Sbjct: 142 LKEVNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLGY 201
Query: 174 LP-VTDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 222
V+D + ++ L+KL YL+L G SQV + G L L LNL +
Sbjct: 202 CKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDG 261
Query: 223 GVTKLPNISSLECLNLSNCT--------------------IDSILEGNENK----APLAK 258
G++ L ++SL LNLSNC+ I ++ E + APL
Sbjct: 262 GISALAEVTSLTSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVN 321
Query: 259 ---ISLAGTTFINEREAFLYIE------TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
+ +AG I + + + +L ++ +++ LT+M+ L +
Sbjct: 322 LVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCG 381
Query: 310 SSMIGDDSVEMVACVGANLRNLN----LSNTRFSSAGVGILAGHLPNLEILSLSG-TQID 364
+ D + + A LRNL +S + G+ L+ L L+ L L G + I
Sbjct: 382 K--VTDRGLRSI----AKLRNLTSLDMVSCFNVTDEGLNELS-KLNRLKSLYLGGCSGIR 434
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
D I+ +S + SL +D+SN +QVG + +L + AL+NL +L + ++
Sbjct: 435 DEGIAALSHLSSLVILDLSN------CRQVGNKA--LLGIGALRNLTNLNLMRCN--RID 484
Query: 425 DATLFPLSTFKELIHLSLRNA--------------------------SLTDVSLHQLSSL 458
D + L+ L L+L N LTD + LS+L
Sbjct: 485 DDGIAHLAGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKLTDAGILNLSTL 544
Query: 459 SKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
+KL ++ + + LT++ L +F +L LDL LL+++ +L K+
Sbjct: 545 TKLQSIDLASCSKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKV 594
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 21/280 (7%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
++ + +R LN C +VT L ++ + L LD+ C VTD G+ L ++ L+
Sbjct: 365 HMESLTKMRFLNFMKCGKVTDRGLRSIAKLRNLTSLDMVSCFNVTDEGLNELSKLNRLKS 424
Query: 145 LWLSE-TGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLW-GSQVS 201
L+L +G+ +GIA LS L +L +LDL V + L + L L L+L +++
Sbjct: 425 LYLGGCSGIRDEGIAALSHLSSLVILDLSNCRQVGNKALLGIGALRNLTNLNLMRCNRID 484
Query: 202 NRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCT--IDSILEGNENK 253
+ G A L RL LNLA + ++ LE L L C D+ +
Sbjct: 485 DDGIAHLAGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKLTDAGILNLSTL 544
Query: 254 APLAKISLAGTTFINER--EAFLYIETSLLSFLDVSNSSL---SRFCFLTQMKALEHLDL 308
L I LA + + + EAFL + L+ LD+ N L L+++ +L L+L
Sbjct: 545 TKLQSIDLASCSKLTDASLEAFLNMPN--LTSLDLGNCCLLSDEGMLTLSKVTSLTSLNL 602
Query: 309 S-SSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGIL 346
S I D +E + + NL ++NL T+ + G+ L
Sbjct: 603 SECGEITDTGLEHLKTL-VNLSSVNLWYCTKVTPVGINFL 641
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +++ G ++ L F L S N+ C + + + +T ++ L+ +C
Sbjct: 321 NLVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKC 380
Query: 126 VKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
KVTD G++ + + L L +S +T +G+ LS L L L LGG + D + +
Sbjct: 381 GKVTDRGLRSIAKLRNLTSLDMVSCFNVTDEGLNELSKLNRLKSLYLGGCSGIRDEGIAA 440
Query: 184 LQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECL 236
L L+ L LDL QV N+ + L+ LNL G+ L ++ L+ L
Sbjct: 441 LSHLSSLVILDLSNCRQVGNKALLGIGALRNLTNLNLMRCNRIDDDGIAHLAGLTRLKTL 500
Query: 237 NLSNC 241
NL+NC
Sbjct: 501 NLANC 505
>gi|406830574|ref|ZP_11090168.1| hypothetical protein SpalD1_03019 [Schlesneria paludicola DSM
18645]
Length = 404
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 59/332 (17%)
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
++D + TDA + L + LE L LS T ++ GIA LS L++L+VL L LPV +
Sbjct: 54 QIDCRDAQEFTDADVTLLKTFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKN 113
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 238
+ L L L LD+ +QVS+ A G PN+++L
Sbjct: 114 AQFKKLIELDSLTTLDVADTQVSDA----------------ALQGSIAHPNLTTL----- 152
Query: 239 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCF 296
+L GN +I+ AG +N+ F L+ LD++ + +S
Sbjct: 153 -------VLSGN-------RITNAG---LNDLSKF-----GQLAILDLTQTRVSDEGMTA 190
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L +++ L L LS ++I D +E + + ++L+ L+L+ T+ + AG+ L G L NL L
Sbjct: 191 LKRLENLTELRLSGNVITDTGLEAIGGL-SHLKILDLTATQITDAGLKHLRG-LNNLNEL 248
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
L Q+ D ++ + +P+L +D T I TD LS AL + +L L
Sbjct: 249 KLGRNQVKDNGVNALVEIPTLIALDFYATQI----------TDECLS--ALGQIANLTTL 296
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLT 448
+L + +SD L L+ + L + L A +T
Sbjct: 297 DLGKNPISDFGLRNLTRLRNLKEIGLVEAPVT 328
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 160/410 (39%), Gaps = 90/410 (21%)
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 231
TD + L+ +LE LDL G+Q+S +G A L + L+ L+LA V KL +
Sbjct: 64 TDADVTLLKTFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKNAQFKKLIELD 123
Query: 232 SLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
SL L++++ + D+ L+G+ L + L+G N +
Sbjct: 124 SLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITN-----------------AGLND 166
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 350
LS+F L L+L+ TR S G+ L L
Sbjct: 167 LSKF-------------------------------GQLAILDLTQTRVSDEGMTALK-RL 194
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
NL L LSG I D + + + LK +D++ T I TD L L+ L
Sbjct: 195 ENLTELRLSGNVITDTGLEAIGGLSHLKILDLTATQI----------TDA--GLKHLRGL 242
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
N+L L L + QV D + L LI L +TD L L ++ LT L +
Sbjct: 243 NNLNELKLGRNQVKDNGVNALVEIPTLIALDFYATQITDECLSALGQIANLTTLDLGKNP 302
Query: 471 LTNSGLGSFKPPRSLKLLDL------HGGWLLTEDAILQFCKMHPRIEVWHELSVICPSD 524
+++ GL + R+LK + L G +DAI P I W+ +D
Sbjct: 303 ISDFGLRNLTRLRNLKEIGLVEAPVTASGLKRFQDAI-----GTPLIITWNG------TD 351
Query: 525 QIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLGGVLL----FSMRYSFK 570
Q SP + + K+ P+P+ L G LL F Y ++
Sbjct: 352 QDIEAASSPVEADVHLEVPKKA--PVPVRPWMLIGNLLVLCVFGAIYLYR 399
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
R+T++ L L+ L LDL++ +V+D GM L + L +L LS +T G+ +
Sbjct: 158 RITNAGLNDLSKFGQLAILDLTQT-RVSDEGMTALKRLENLTELRLSGNVITDTGLEAIG 216
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L +L +LDL +TD L+ L+ L L L L +QV + G L P L L+
Sbjct: 217 GLSHLKILDLTATQITDAGLKHLRGLNNLNELKLGRNQVKDNGVNALVEIPTLIALDFYA 276
Query: 222 TGVTK-----LPNISSLECLNLSNCTI 243
T +T L I++L L+L I
Sbjct: 277 TQITDECLSALGQIANLTTLDLGKNPI 303
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 338 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--FIQQVG 395
F+ A V +L P LE L LSGTQI I+ +S++ SL + ++N +K F + +
Sbjct: 63 FTDADVTLLK-TFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKNAQFKKLIE 121
Query: 396 AET-------DLVLSLTALQ-NLNH--LERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
++ D +S ALQ ++ H L L L ++++A L LS F +L L L
Sbjct: 122 LDSLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITNAGLNDLSKFGQLAILDLTQT 181
Query: 446 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
++D + L L LT L + V+T++GL + LK+LDL
Sbjct: 182 RVSDEGMTALKRLENLTELRLSGNVITDTGLEAIGGLSHLKILDL 226
>gi|344174745|emb|CCA86555.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
syzygii R24]
Length = 468
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 153/376 (40%), Gaps = 57/376 (15%)
Query: 117 LKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LKELDLSRC +T AG+ HL + L +L + + + A+G L++ L+ LD+
Sbjct: 76 LKELDLSRCRGPITAAGIAHLSRLP-LVRLNVRDKRIGAEGARRLANHPTLTSLDVSNGR 134
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ R+L TKL L + +++ GA L L+ L+++ G+
Sbjct: 135 IGPEGARALADNTKLTTLSVSHNRIGAEGAKALAASKTLTSLDISENGI----------- 183
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
GNE LA + T +N + + +E +
Sbjct: 184 -------------GNEGACALATNAKLTTLNVNRNQ--IGVEGA---------------K 213
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L
Sbjct: 214 ALAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTS 271
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L + I D ++ SL + I + I GA+ AL L
Sbjct: 272 LRIDSNTIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTT 319
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LNL + DA S LI LS+R + L+D L++ LT L D + ++G
Sbjct: 320 LNLGYNGIGDAGAQAWSANTTLISLSVRRSGLSDAGATTLAASKTLTTLDAGDNTIRDAG 379
Query: 476 LGSFKPPRSLKLLDLH 491
+ R+L LD+
Sbjct: 380 ARALAANRTLTTLDVR 395
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + E L L +LNV + ++ AL L LD+ + D G++
Sbjct: 180 ENGIGNEGACALATNAKLTTLNV-NRNQIGVEGAKALAAGEALTSLDIG-GNDIGDEGVR 237
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + + L L + T + ADG+ L++ + L+ L + + D R+L T L L
Sbjct: 238 ALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNTIGDAGARALATNTSLTTLH 297
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+ + +S GA L L+ LNL + G+
Sbjct: 298 IESNGISPAGAQALAANTTLTTLNLGYNGI 327
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
++ + AL T L L+L + DAG + + +TL L + +GL+ G L++
Sbjct: 303 ISPAGAQALAANTTLTTLNLGYN-GIGDAGAQAWSANTTLISLSVRRSGLSDAGATTLAA 361
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
+ L+ LD G + D R+L L LD+ +++ N GA L RL+ L+L
Sbjct: 362 SKTLTTLDAGDNTIRDAGARALAANRTLTTLDVRSNEIENAGARALAANTRLASLDLRNN 421
Query: 223 GVTK 226
VTK
Sbjct: 422 RVTK 425
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 143/370 (38%), Gaps = 43/370 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ AE L L SL+V++ R + AL T L L +S ++ G K L
Sbjct: 111 IGAEGARRLANHPTLTSLDVSNGR-IGPEGARALADNTKLTTLSVSHN-RIGAEGAKALA 168
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ TL L +SE G+ +G L++ L+ L++ + ++L L LD+ G
Sbjct: 169 ASKTLTSLDISENGIGNEGACALATNAKLTTLNVNRNQIGVEGAKALAAGEALTSLDIGG 228
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNEN 252
+ + + G L RL+ LN+ T GV L +L L + + TI G+
Sbjct: 229 NDIGDEGVRALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNTI-----GDAG 283
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
LA N L+IE++ +S L L L+L +
Sbjct: 284 ARALA---------TNTSLTTLHIESNGISPAGAQ--------ALAANTTLTTLNLGYNG 326
Query: 313 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
IGD + + L +L++ + S AG LA L L I D ++
Sbjct: 327 IGDAGAQAWSA-NTTLISLSVRRSGLSDAGATTLAAS-KTLTTLDAGDNTIRDAGARALA 384
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
+L +D+ + + I+ GA AL L L+L +V+ A + L
Sbjct: 385 ANRTLTTLDVRSNE----IENAGAR--------ALAANTRLASLDLRNNRVTKAGVRALL 432
Query: 433 TFKELIHLSL 442
+ L L +
Sbjct: 433 ANRTLSSLGV 442
>gi|290993192|ref|XP_002679217.1| predicted protein [Naegleria gruberi]
gi|284092833|gb|EFC46473.1| predicted protein [Naegleria gruberi]
Length = 310
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 150/304 (49%), Gaps = 32/304 (10%)
Query: 74 GENS-VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
G+NS + E + + L+ L+V+ + + + ++ + L+EL++ C D G
Sbjct: 19 GKNSEITVELAKCICQLKNLKKLDVSYNYHLENEVVELISELRELRELNIRYC----DIG 74
Query: 133 MKHLLSISTLEKLWLSETGLT---ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
++ + ++ L+KL + G+ ADG LLS++++L+ LD+ + D +S+ L +
Sbjct: 75 VEEVKYLTKLDKLHSLDIGINQIYADGAKLLSTMKSLTKLDVAECEIGDEGCQSITELYQ 134
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 244
L L++ G + GA + L L+++ G + +S LE LN+S ID
Sbjct: 135 LTDLNINGDGIGVGGANCIGQMRNLKSLDISNNFFGNYGAKSISELSQLEILNVSYSDID 194
Query: 245 SI----LEGNENKAPLA----KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
+ L +N L+ +I+ GT +I +E L+ LD+SN+ +
Sbjct: 195 EVGVYQLRKLKNLTSLSIHHNEITDEGTKYI--------VELDQLTHLDISNNQIETEGA 246
Query: 297 --LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
+++M L L++SS++IGD+ + ++ + L +LN+S R S GV + L +L+
Sbjct: 247 KSISEMSQLTSLNISSNIIGDEGAQYISHL-KKLTSLNVSKCRVSEEGVESIRKQLKHLK 305
Query: 355 ILSL 358
L +
Sbjct: 306 TLEV 309
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 293 RFC--------FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
R+C +LT++ L LD+ + I D ++++ + + L L+++ G
Sbjct: 69 RYCDIGVEEVKYLTKLDKLHSLDIGINQIYADGAKLLSTMKS-LTKLDVAECEIGDEGCQ 127
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 404
+ L L L+++G I + + M +LK +DISN F GA+
Sbjct: 128 SIT-ELYQLTDLNINGDGIGVGGANCIGQMRNLKSLDISNN----FFGNYGAK------- 175
Query: 405 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
++ L+ LE LN+ + + + ++ L K L LS+ + +TD + L +LT+L
Sbjct: 176 -SISELSQLEILNVSYSDIDEVGVYQLRKLKNLTSLSIHHNEITDEGTKYIVELDQLTHL 234
Query: 465 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
I + + G S L L++ + E A
Sbjct: 235 DISNNQIETEGAKSISEMSQLTSLNISSNIIGDEGA 270
>gi|149176763|ref|ZP_01855374.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844404|gb|EDL58756.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 416
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 66 NAEAIELRGENS-VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
NA + L N+ V + + L F LR+L + + + + ++A L M L +LDL +
Sbjct: 210 NASLVYLHLSNTNVSSAGLQELSKFPNLRALRLGNLK-IKAAAFAKLANMKRLYQLDL-Q 267
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
V DA L + + +L L ++ +T G+ L++++NL L L G +TD L+ L
Sbjct: 268 GTAVNDAVALQLSQLDQITQLRLDQSQITDQGLRHLATMKNLETLFLPGAKITDSGLKVL 327
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--------KLPNISSLECL 236
L KL+YLDL +Q+S+ G L P L LNL+ T VT + P + S+E
Sbjct: 328 SQLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLSNTRVTDQAKQILLQFPALESIEAF 387
Query: 237 N--LSNCTIDSI 246
N +S TI+ I
Sbjct: 388 NTSISPVTIEDI 399
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 161/387 (41%), Gaps = 67/387 (17%)
Query: 22 ESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSL---LEVFKHNAEAIELR--GEN 76
E +Q+WR + + E++ H + ++ + +L + S+ F N ++ R G
Sbjct: 41 EGLQRWRAMKLA-EKVIQHDGEIRFKNSLLTQLDWWSVSPQTHAFWGNIYSVYTRPSGSF 99
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV----KVTDAG 132
VD +++ LG +++L + + T + G T LK+ L +TD G
Sbjct: 100 QVDDDFLLELGNLHSIQNLTLGNPHNPT---IITDQGATYLKQQKLGHLGITGGSMTDNG 156
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+ L +++L L L +T D + ++ L +LDL T+ L++L L Y
Sbjct: 157 LNELAEMNSLRTLGLHHLAITGDQLPP-NTFPKLKMLDLSDTRFTNQGLKNLSPNASLVY 215
Query: 193 LDLWGSQVSNRGAAVLKMFP-----RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 247
L L + VS+ G L FP RL L + KL N+ L L+L
Sbjct: 216 LHLSNTNVSSAGLQELSKFPNLRALRLGNLKIKAAAFAKLANMKRLYQLDLQG------- 268
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
T +N+ A L+Q+ + L
Sbjct: 269 -----------------TAVNDAVALQ----------------------LSQLDQITQLR 289
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
L S I D + +A + NL L L + + +G+ +L+ LP L+ L LS TQI D
Sbjct: 290 LDQSQITDQGLRHLATM-KNLETLFLPGAKITDSGLKVLS-QLPKLDYLDLSDTQISDEG 347
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQV 394
+ +S +P+L+ +++SNT + +Q+
Sbjct: 348 LRQLSKIPALRMLNLSNTRVTDQAKQI 374
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 22/242 (9%)
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVA 322
T I ++ A Y++ L L ++ S++ L +M +L L L I D ++
Sbjct: 127 TIITDQGA-TYLKQQKLGHLGITGGSMTDNGLNELAEMNSLRTLGLHHLAITGD--QLPP 183
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPN--LEILSLSGTQIDDYAISYMSMMPSLKFI 380
L+ L+LS+TRF++ G+ L+ PN L L LS T + + +S P+L+ +
Sbjct: 184 NTFPKLKMLDLSDTRFTNQGLKNLS---PNASLVYLHLSNTNVSSAGLQELSKFPNLRAL 240
Query: 381 DISNTDIKGF----------IQQVGAETDLVLSLTALQ--NLNHLERLNLEQTQVSDATL 428
+ N IK + Q+ + V ALQ L+ + +L L+Q+Q++D L
Sbjct: 241 RLGNLKIKAAAFAKLANMKRLYQLDLQGTAVNDAVALQLSQLDQITQLRLDQSQITDQGL 300
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
L+T K L L L A +TD L LS L KL L + D +++ GL +L++L
Sbjct: 301 RHLATMKNLETLFLPGAKITDSGLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALRML 360
Query: 489 DL 490
+L
Sbjct: 361 NL 362
>gi|46446626|ref|YP_007991.1| hypothetical protein pc0992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400267|emb|CAF23716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 583
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 165/363 (45%), Gaps = 57/363 (15%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F + EA++ + + L L+ L++ C +T L L +
Sbjct: 217 FEKIINHFSNEIEALDFSNNAHLTDAHLLALKNCENLKVLHLEACLAITDDGLAHLAPLV 276
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKL-----WLSETGL------------------ 152
L+ LDLS C +TD G+ HL ++ L+ L + ++ GL
Sbjct: 277 ALQHLDLSDCENLTDVGLAHLTPLTALQHLDLRGCYFTDAGLAHLTPLTALQHLNLSFCS 336
Query: 153 --TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLK 209
T G+A L+ L L LDL G +TD L L LT L++LDL G + +++ G A L+
Sbjct: 337 NATDAGLAHLTPLTALQHLDLRGCYLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAHLR 396
Query: 210 MFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 263
L LNL W G+ L +++L+ L+LS C + I+ G
Sbjct: 397 PLTALQHLNLNWCRNLTDAGLAHLTPLTALQHLDLSFC---------------SNITDDG 441
Query: 264 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVA 322
+ ++ S ++++ L+ LT L+HL+L+ + D + +
Sbjct: 442 LAHLTLLTTLQHLNLS--GCYKLTDAGLAHLTLLT---GLQHLNLNWYKNLTDAGLAHLT 496
Query: 323 CVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFI 380
+ A L+ L L++ + + AG+ L L L+ L+LSG ++ D +++++ + +L+++
Sbjct: 497 PL-AGLQYLALTDCKNLTDAGLAHLTP-LTALQHLNLSGCYKLTDAGLAHLTSLTALQYL 554
Query: 381 DIS 383
D+S
Sbjct: 555 DLS 557
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 41/205 (20%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC-- 125
+ ++L G + +A+L L+ LN+ CR +T + L LT +T L+ LDLS C
Sbjct: 377 QHLDLIGCKDLTDAGLAHLRPLTALQHLNLNWCRNLTDAGLAHLTPLTALQHLDLSFCSN 436
Query: 126 -----------------------VKVTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLS 161
K+TDAG+ HL ++ L+ L L+ LT G+A L+
Sbjct: 437 ITDDGLAHLTLLTTLQHLNLSGCYKLTDAGLAHLTLLTGLQHLNLNWYKNLTDAGLAHLT 496
Query: 162 SLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNL 219
L L L L +TD L L LT L++L+L G ++++ G A L L +L+L
Sbjct: 497 PLAGLQYLALTDCKNLTDAGLAHLTPLTALQHLNLSGCYKLTDAGLAHLTSLTALQYLDL 556
Query: 220 AWTGVTKLPNISSLECLNLSNCTID 244
++ C+NL++ +D
Sbjct: 557 SY-------------CMNLTDDGLD 568
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 198/432 (45%), Gaps = 83/432 (19%)
Query: 80 AEWMAYLGAF-RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
AE+ + F + +L+ ++ +T + L AL LK L L C+ +TD G+ HL
Sbjct: 215 AEFEKIINHFSNEIEALDFSNNAHLTDAHLLALKNCENLKVLHLEACLAITDDGLAHLAP 274
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ L+ L LS+ +NL TD+ L L LT L++LDL G
Sbjct: 275 LVALQHLDLSDC-------------ENL----------TDVGLAHLTPLTALQHLDLRGC 311
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
++ G+ L +++L+ LNLS C+ N A LA
Sbjct: 312 YFTD-------------------AGLAHLTPLTALQHLNLSFCS-------NATDAGLAH 345
Query: 259 IS-LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL-SSSMIGDD 316
++ L ++ R +L +++ L+ LT + L+HLDL + D
Sbjct: 346 LTPLTALQHLDLRGCYL------------TDAGLAH---LTPLTGLQHLDLIGCKDLTDA 390
Query: 317 SVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMM 374
+ + + A L++LNL+ R + AG+ L L L+ L LS + I D +++++++
Sbjct: 391 GLAHLRPLTA-LQHLNLNWCRNLTDAGLAHLTP-LTALQHLDLSFCSNITDDGLAHLTLL 448
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
+L+ +++S G + A + LT LQ+LN LN + ++DA L L+
Sbjct: 449 TTLQHLNLS-----GCYKLTDAGLAHLTLLTGLQHLN----LNWYK-NLTDAGLAHLTPL 498
Query: 435 KELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHG 492
L +L+L + +LTD L L+ L+ L +L++ LT++GL +L+ LDL
Sbjct: 499 AGLQYLALTDCKNLTDAGLAHLTPLTALQHLNLSGCYKLTDAGLAHLTSLTALQYLDLSY 558
Query: 493 GWLLTEDAILQF 504
LT+D + +F
Sbjct: 559 CMNLTDDGLDRF 570
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N DA +A+L L+ LN++ C ++T + L LT +T L+ LDLS C+ +TD G+
Sbjct: 510 KNLTDA-GLAHLTPLTALQHLNLSGCYKLTDAGLAHLTSLTALQYLDLSYCMNLTDDGLD 568
Query: 135 HLLSIST 141
+++T
Sbjct: 569 RFKTLAT 575
>gi|46447562|ref|YP_008927.1| hypothetical protein pc1928 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401203|emb|CAF24652.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 137/299 (45%), Gaps = 46/299 (15%)
Query: 30 QRRSLERLPAHLADSLLR-------HLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEW 82
Q ER+ HL+D + + HL S+L+ K N +A+ +
Sbjct: 181 QLAEFERIINHLSDEIKKLNFSENTHLTDAHF---SVLKECK-NLKALHFEACQILTDAG 236
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ LN++ C +T L LT +T L+ LDLS+C TD G+ HL S++ L
Sbjct: 237 LAHLKPLTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTAL 296
Query: 143 EKLWL-SETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ- 199
+ L L L G+A L L +L L+L G +TD L L LT L++L+L +
Sbjct: 297 QYLALMGCKNLIDAGLAHLKPLTSLQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCEN 356
Query: 200 VSNRGAAVLKMFPRLSFLN------LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+++ G A L++ L +LN L G+ L +++L+ L+LS C
Sbjct: 357 LTDVGLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLSQC------------ 404
Query: 254 APLAKISLAGTTFINEREAFLYIETSLLSFLDVS---NSSLSRFCFLTQMKALEHLDLS 309
L I LA T + L LD+S N + LT + AL+HLDLS
Sbjct: 405 WHLTDIGLAHLTPLKS-----------LQHLDLSRCENLTDDGLVHLTPLTALQHLDLS 452
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
+ EN D +A+L L+ LN+ +CR++T L LT +T L+ LDLS+C +TD G
Sbjct: 353 KCENLTDV-GLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLSQCWHLTDIG 411
Query: 133 MKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKL 190
+ HL + +L+ L LS LT DG+ L+ L L LDL +TD L L LT L
Sbjct: 412 LAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTL 471
Query: 191 EYLDLWGSQ-VSNRGAAVLKMFPRLSFLNL 219
++LDL G + +++ G A L L +L+L
Sbjct: 472 QHLDLMGCKNLTDDGLAHLTPLIALQYLDL 501
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+ +A+L L+ L+++ C +T L LT + L+ LDLSRC +TD G+ HL ++
Sbjct: 385 DGLAHLTPVTNLQHLDLSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLT 444
Query: 141 TLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGS 198
L+ L LS LT DG+A L+ L L LDL G +TD L L L L+YLDL G
Sbjct: 445 ALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQYLDLIGC 504
Query: 199 Q-VSNRGAAVLK 209
+ ++ G A K
Sbjct: 505 KNFTDDGLARFK 516
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 171/420 (40%), Gaps = 107/420 (25%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
++ LN ++ +T + L LK L C +TDAG+ HL ++ L+ L LS
Sbjct: 196 IKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHLKPLTALQHLNLS--- 252
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVL 208
G +TD+ L L LT L++LDL W ++ G A L
Sbjct: 253 --------------------GCYHLTDVGLAHLTFLTGLQHLDLSQCW--HFTDDGLAHL 290
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 268
T +T L ++ + C NL ID+ L + L ++L G ++
Sbjct: 291 -------------TSLTALQYLALMGCKNL----IDAGLAHLKPLTSLQHLNLRGCGYLT 333
Query: 269 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 328
+ + L + L+HL+LS NL
Sbjct: 334 D----------------------AGLAHLAPLTGLQHLNLSKC--------------ENL 357
Query: 329 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDI 387
++ L++ R A L+ L+L ++ D +++++ + +L+ +D+S
Sbjct: 358 TDVGLAHLRLLVA-----------LQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLS---- 402
Query: 388 KGFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA- 445
Q TD+ L+ LT L++L HL+ E ++D L L+ L HL L
Sbjct: 403 -----QCWHLTDIGLAHLTPLKSLQHLDLSRCEN--LTDDGLVHLTPLTALQHLDLSYCY 455
Query: 446 SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
+LTD L L+ L+ L +L + LT+ GL P +L+ LDL G T+D + +F
Sbjct: 456 NLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARF 515
>gi|46446916|ref|YP_008281.1| hypothetical protein pc1282 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400557|emb|CAF24006.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1082
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAF 89
Q+ L L ++L DSLL + F +L+ F + E + + + L
Sbjct: 734 QQYRLNVLKSYLVDSLLNQ-TSQLTEFEKVLKYFSNEIEELNFSKNIFLTDAHLLALKNC 792
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL---W 146
+ L++L++ +C +T + L LT + L+ LDLS C TDAG+ HL + L L W
Sbjct: 793 KNLKALHLQECPNLTDAGLAHLTSLVTLQHLDLSYCSNFTDAGLAHLRPLVALTHLNLRW 852
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRG 204
LT G+A L+ L L LDL TD L L L L++LDL S ++ G
Sbjct: 853 CR--NLTDAGLAHLTPLVALKYLDLSYCSNFTDAGLTHLTPLVTLQHLDLSCCSNFTDAG 910
Query: 205 AAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
A L+ L+ LNL W G+ L + +L+ LNL+ C K
Sbjct: 911 LAHLRPLVALTHLNLRWCHNFTDAGLAHLTPLVALQHLNLNLC---------------WK 955
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
++ AG + A ++ S SN + + LT + L+HLDLSS
Sbjct: 956 LTDAGLAHLRPLVALQNLDLSY-----CSNFTDAGLAHLTPLVVLQHLDLSS 1002
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L LN+ CR +T + L LT + LK LDLS C TDAG+ H
Sbjct: 830 NFTDA-GLAHLRPLVALTHLNLRWCRNLTDAGLAHLTPLVALKYLDLSYCSNFTDAGLTH 888
Query: 136 LLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYL 193
L + TL+ L LS + T G+A L L L+ L+L TD L L L L++L
Sbjct: 889 LTPLVTLQHLDLSCCSNFTDAGLAHLRPLVALTHLNLRWCHNFTDAGLAHLTPLVALQHL 948
Query: 194 DL---WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNC 241
+L W ++++ G A L+ L L+L++ G+ L + L+ L+LS+C
Sbjct: 949 NLNLCW--KLTDAGLAHLRPLVALQNLDLSYCSNFTDAGLAHLTPLVVLQHLDLSSC 1003
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ L+++ C+++T + L LT + L+ LDLS C +TDAG++H
Sbjct: 980 NFTDA-GLAHLTPLVVLQHLDLSSCKKLTDAGLAHLTPLVALQHLDLSWCNHLTDAGLRH 1038
Query: 136 LLSISTLEKLWL-SETGLTADGIALLSS 162
L + L+ L+L S T G+A S
Sbjct: 1039 LTPLLALQDLYLYSCENFTEVGLAHFKS 1066
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L++L+++ C T + L LT + L+ LDLS C K+TDAG+ HL + L
Sbjct: 961 LAHLRPLVALQNLDLSYCSNFTDAGLAHLTPLVVLQHLDLSSCKKLTDAGLAHLTPLVAL 1020
Query: 143 EKLWLSETG-LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
+ L LS LT G+ L+ L L + DL L S + T++
Sbjct: 1021 QHLDLSWCNHLTDAGLRHLTPL----------LALQDLYLYSCENFTEV 1059
>gi|46447548|ref|YP_008913.1| hypothetical protein pc1914 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401189|emb|CAF24638.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN DA +AYL L+ LN++ C +T + L LT + L+ LDLS C +TDAG+
Sbjct: 255 ENLTDA-GLAYLKPLTALQHLNLSGCWNLTDAGLVHLTPLVGLQHLDLSYCENLTDAGLA 313
Query: 135 HLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEY 192
HL ++ L+ L LS LT G+A L+ L L LDL +TD L L LT L++
Sbjct: 314 HLTPLTALQHLGLSCCENLTDAGLAHLALLTTLQHLDLSCCYNLTDASLSHLTPLTALQH 373
Query: 193 LDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCT--I 243
L L G + +++ G A L L L NL G++ L ++ L+ LNLS C
Sbjct: 374 LYLIGCENLTDAGLAHLTPLTALQHLDLSCCFNLTDAGLSHLTPLTGLQHLNLSRCYKLT 433
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS---NSSLSRFCFLTQM 300
D+ L L ++L+ + + + L LD+ N + + LT +
Sbjct: 434 DAGLAHLTTLVALQHLNLSECRHLTDAGLAHLTPLTALQHLDLKYCINLTDAGLAHLTPL 493
Query: 301 KALEHLDLS-SSMIGDDSVEMVACVGANLR 329
AL+HLDLS + DD ++ + +L
Sbjct: 494 TALQHLDLSRCRRLTDDGLDRFKTLATSLN 523
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 170/368 (46%), Gaps = 35/368 (9%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAF 89
R L RL +L +++ L+ + ++ H ++ IE+ + A+L A
Sbjct: 156 HRYQLNRLKNYLEFTVVSALLNQNFQLVDFEKIINHFSKKIEVLNFSENTHLTNAHLLAL 215
Query: 90 RYLRSLNV---ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ +++ V CR VT + L L + L+ LDLS C +TDAG+ +L ++ L+ L
Sbjct: 216 KDCKNIEVLYFKKCRGVTDAGLAHLVPLKGLQHLDLSYCENLTDAGLAYLKPLTALQHLN 275
Query: 147 LSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-VSNR 203
LS LT G+ L+ L L LDL +TD L L LT L++L L + +++
Sbjct: 276 LSGCWNLTDAGLVHLTPLVGLQHLDLSYCENLTDAGLAHLTPLTALQHLGLSCCENLTDA 335
Query: 204 GAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
G A L + L L NL ++ L +++L+ L L C EN
Sbjct: 336 GLAHLALLTTLQHLDLSCCYNLTDASLSHLTPLTALQHLYLIGC---------EN----- 381
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
++ AG + A +++ S +++++ LS LT + L+HL+LS D+
Sbjct: 382 -LTDAGLAHLTPLTALQHLDLS--CCFNLTDAGLSH---LTPLTGLQHLNLSRCYKLTDA 435
Query: 318 VEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMP 375
L++LNLS R + AG+ L L L+ L L + D +++++ +
Sbjct: 436 GLAHLTTLVALQHLNLSECRHLTDAGLAHLTP-LTALQHLDLKYCINLTDAGLAHLTPLT 494
Query: 376 SLKFIDIS 383
+L+ +D+S
Sbjct: 495 ALQHLDLS 502
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 172/419 (41%), Gaps = 101/419 (24%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ + LN ++ +T++ L AL ++ L +C VTDAG+ HL+ + L+ L L
Sbjct: 194 KKIEVLNFSENTHLTNAHLLALKDCKNIEVLYFKKCRGVTDAGLAHLVPLKGLQHLDL-- 251
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
S +NL TD L L+ LT L++L+L G
Sbjct: 252 -----------SYCENL----------TDAGLAYLKPLTALQHLNLSGCW---------- 280
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
NL G+ L + L+ L+LS C N A LA
Sbjct: 281 --------NLTDAGLVHLTPLVGLQHLDLSYCE-------NLTDAGLAH----------- 314
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
LT + AL+HL LS D+ + L+
Sbjct: 315 ---------------------------LTPLTALQHLGLSCCENLTDAGLAHLALLTTLQ 347
Query: 330 NLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDI 387
+L+LS + A + L L L+ L L G + + D +++++ + +L+ +D+S
Sbjct: 348 HLDLSCCYNLTDASLSHLTP-LTALQHLYLIGCENLTDAGLAHLTPLTALQHLDLSCC-- 404
Query: 388 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-S 446
A + LT LQ+LN L R +++DA L L+T L HL+L
Sbjct: 405 ---FNLTDAGLSHLTPLTGLQHLN-LSRC----YKLTDAGLAHLTTLVALQHLNLSECRH 456
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
LTD L L+ L+ L +L ++ + LT++GL P +L+ LDL LT+D + +F
Sbjct: 457 LTDAGLAHLTPLTALQHLDLKYCINLTDAGLAHLTPLTALQHLDLSRCRRLTDDGLDRF 515
>gi|168704615|ref|ZP_02736892.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 294
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
L G DA+ + L AF++L L++ D + V+ + L LT L EL LSR KVTDA
Sbjct: 54 LEGTKIADAD-LKELAAFKHLAVLSLYDTQ-VSDAGLKELTSSKGLTELLLSR-TKVTDA 110
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G+K + ++ LEKL L ET +T GI L L+ LS L L G +TD +++ L L
Sbjct: 111 GLKDVAKLTHLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKITDAAFKNVAKLKGLT 170
Query: 192 YLDLWGSQVSNRG---AAVLKMFPR--LSFLNLAWTGVTKLPNISSLECLNLSNCTI 243
L L G++++ G A + F LS +++ G+ ++ SL L LS C I
Sbjct: 171 TLRLDGAKITGVGLKQVAAIDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLSECKI 227
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 267 INEREAFLYIETSLLSFLD--VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+ E AF ++ ++LS D VS++ L LT K L L LS + + D ++ VA +
Sbjct: 64 LKELAAFKHL--AVLSLYDTQVSDAGLKE---LTSSKGLTELLLSRTKVTDAGLKDVAKL 118
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
+L L L T + AG+G L L L L L GT+I D A ++ + L + +
Sbjct: 119 -THLEKLALDETAVTDAGIGELV-PLKRLSELWLMGTKITDAAFKNVAKLKGLTTLRLDG 176
Query: 385 TDIKGF-IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
I G ++QV A ++ L L T +S+A L ++ FK L L L
Sbjct: 177 AKITGVGLKQVAA-------------IDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLS 223
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+TD L +L++L KLT L + +T++G+ S + LK+L L
Sbjct: 224 ECKITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHL 270
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L G+T L+ LD K+T G+K + +I L+LS T ++ G+ +++ ++L +L
Sbjct: 166 LKGLTTLR-LD---GAKITGVGLKQVAAIDGFHSLYLSGTDISEAGLKEIAAFKSLRILQ 221
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L +TD L+ L L KL L L +QV++ G L +L L+L T VT
Sbjct: 222 LSECKITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHLTSTQVT 276
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L HL L+L TQVSDA L L++ K L L L +TD L ++ L+ L
Sbjct: 64 LKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGLKDVAKLTHLEK 123
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L++ + +T++G+G P + L L L G
Sbjct: 124 LALDETAVTDAGIGELVPLKRLSELWLMG 152
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 51/256 (19%)
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDL-------GGL-----------------PVTDL 179
+LWL T + + L++ ++L+VL L GL VTD
Sbjct: 51 ELWLEGTKIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDA 110
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLN 237
L+ + LT LE L L + V++ G L RLS L L T +T N++ L+
Sbjct: 111 GLKDVAKLTHLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKITDAAFKNVAKLK--G 168
Query: 238 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF--LYIETSLLSFLDVSNSSLSRFC 295
L+ +D AKI+ G + + F LY LS D+S + L
Sbjct: 169 LTTLRLDG-----------AKITGVGLKQVAAIDGFHSLY-----LSGTDISEAGLKE-- 210
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
+ K+L L LS I D ++ +A + L L+L T+ + AGV LA L L++
Sbjct: 211 -IAAFKSLRILQLSECKITDGGLKELAALD-KLTTLHLEKTQVTDAGVKSLA-SLKKLKV 267
Query: 356 LSLSGTQIDDYAISYM 371
L L+ TQ+ D + +
Sbjct: 268 LHLTSTQVTDAGVKTI 283
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 72 LRGENSVDAEW--MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
L G DA + +A L LR D ++T L + + L LS ++
Sbjct: 150 LMGTKITDAAFKNVAKLKGLTTLR----LDGAKITGVGLKQVAAIDGFHSLYLSG-TDIS 204
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+AG+K + + +L L LSE +T G+ L++L L+ L L VTD ++SL L K
Sbjct: 205 EAGLKEIAAFKSLRILQLSECKITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASLKK 264
Query: 190 LEYLDLWGSQVSNRGAAVLK-MFPR 213
L+ L L +QV++ G ++ P+
Sbjct: 265 LKVLHLTSTQVTDAGVKTIRNALPK 289
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
LE T+++DA L L+ FK L LSL + ++D L +L+S LT L + +T++GL
Sbjct: 54 LEGTKIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGL 112
>gi|46447569|ref|YP_008934.1| hypothetical protein pc1935 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401210|emb|CAF24659.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 504
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 63/332 (18%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRR---LIFPSLLEVFKHNAEAIELRGENSVDAEWMAYL 86
R L RL +L +++ L+ + F ++ F EA+ + + + L
Sbjct: 187 HRYQLNRLKNYLEFTVVSALLNQTSQLAEFERIINRFSKKIEALNFSNQAYLTDVHLLAL 246
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ L++L C +T++ L L + L+ LDL+ C +TDAG+ HL + L+ L
Sbjct: 247 KDCKNLKALYFRKCPNLTAAGLAYLRPLVALQHLDLNYCYNLTDAGLAHLAPLVALKHLN 306
Query: 147 LSETG-LTADGIALLS---SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL------- 195
LS G LT G+A LS +LQ+L++ + +TD L L+ L L+YL+L
Sbjct: 307 LSGHGYLTDAGLAHLSPLTALQHLNLSECCNYKLTDAGLAHLRPLVALKYLNLSRCSKFT 366
Query: 196 -----------------------WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KL 227
G+ +++ G A L+ L LNL+W GVT L
Sbjct: 367 GAGLAHLRPLTALQHLNLSGCGGIGAGLASAGLAHLRPLTALQHLNLSWCGVTDDELAHL 426
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+ +L+ L+LSNC ++ AG +N A ++ S ++
Sbjct: 427 TPLEALQYLDLSNCW---------------HLTDAGLAHLNPLIALQHLNLSKCD--QLT 469
Query: 288 NSSLSRFCFLTQMKALEHLDLSS-SMIGDDSV 318
N+ L+ LT AL+HL+LS S + DD +
Sbjct: 470 NAGLAHLIPLT---ALQHLNLSGCSNLTDDGL 498
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 37/251 (14%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRF- 338
L F N + + +L + AL+HLDL+ + D + +A + A L++LNLS +
Sbjct: 255 LYFRKCPNLTAAGLAYLRPLVALQHLDLNYCYNLTDAGLAHLAPLVA-LKHLNLSGHGYL 313
Query: 339 SSAGVGILAGHLPNLEILSLS---GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
+ AG+ L+ L L+ L+LS ++ D ++++ + +LK++++S + G
Sbjct: 314 TDAGLAHLSP-LTALQHLNLSECCNYKLTDAGLAHLRPLVALKYLNLSRCS-----KFTG 367
Query: 396 AETDLVLSLTALQNLN-----------------------HLERLNLEQTQVSDATLFPLS 432
A + LTALQ+LN L+ LNL V+D L L+
Sbjct: 368 AGLAHLRPLTALQHLNLSGCGGIGAGLASAGLAHLRPLTALQHLNLSWCGVTDDELAHLT 427
Query: 433 TFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 490
+ L +L L N LTD L L+ L L +L++ LTN+GL P +L+ L+L
Sbjct: 428 PLEALQYLDLSNCWHLTDAGLAHLNPLIALQHLNLSKCDQLTNAGLAHLIPLTALQHLNL 487
Query: 491 HGGWLLTEDAI 501
G LT+D +
Sbjct: 488 SGCSNLTDDGL 498
>gi|217074604|gb|ACJ85662.1| unknown [Medicago truncatula]
Length = 331
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 9/206 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + +L L LN+ C+ + L LTG+T LK L LS +V ++G+++
Sbjct: 90 NKITDACLVHLKGLTKLEYLNLDSCQ-IGDEGLVNLTGLTLLKSLVLSD-TEVGNSGIRY 147
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ ++ LE L LS T +T +G+ L L NL L+L +TD L +L L+ L LDL
Sbjct: 148 ISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDL 207
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLS-NCTI-DSILE 248
+G+++++ G L+ F L L + GV + I SL LNLS NC + D LE
Sbjct: 208 FGARITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIVSLTQLNLSQNCKLTDKTLE 267
Query: 249 GNENKAPLAKISLAGTTFINEREAFL 274
L ++++ + NE +L
Sbjct: 268 LISGMTALRSLNVSNSRVTNEGLRYL 293
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 164/364 (45%), Gaps = 64/364 (17%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
MK + L++L +S + +T GI+ L LQ LS L++ G +T + L L
Sbjct: 1 MKAISGFINLKELQISNSSITDLGISYLRGLQKLSTLNVEGCSITAACFEYISALAALAC 60
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSIL 247
L+L +S+ G L L+LA+ +T L ++ LE LNL +C I
Sbjct: 61 LNLNRCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQI---- 116
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
G+E L ++L +++ +LS +V NS + +++ + LE L+
Sbjct: 117 -GDEGLVNLTGLTL--------------LKSLVLSDTEVGNSGIR---YISGLNKLEDLN 158
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
LS + + D+ ++ + + NL++LNL + + AG+ L L L L L G +I D
Sbjct: 159 LSFTSVTDNGLKRLLGL-TNLKSLNLDARQITDAGLANLT-SLSGLITLDLFGARITDSG 216
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 427
+Y+ +L+ ++I G + G + ++ + L +LNL Q
Sbjct: 217 TTYLRSFKNLQSLEICG----GLLTDAGVKN--------IREIVSLTQLNLSQ------- 257
Query: 428 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 487
N LTD +L +S ++ L +L++ ++ +TN GL KP ++L+
Sbjct: 258 ----------------NCKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRT 301
Query: 488 LDLH 491
L L
Sbjct: 302 LSLE 305
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 281 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LS L+V S++ CF ++ + AL L+L+ + DD E + + L+ L+L+ +
Sbjct: 34 LSTLNVEGCSITAACFEYISALAALACLNLNRCGLSDDGFEKFSGL-TGLKRLSLAFNKI 92
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQV 394
+ A + L G L LE L+L QI D + ++ + LK + +S+T++ +I +
Sbjct: 93 TDACLVHLKG-LTKLEYLNLDSCQIGDEGLVNLTGLTLLKSLVLSDTEVGNSGIRYISGL 151
Query: 395 GAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
DL LS T++ + L +L+ LNL+ Q++DA L L++ LI L L A
Sbjct: 152 NKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDLFGAR 211
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
+TD L S L +L I +LT++G+ + + SL L+L LT+ +
Sbjct: 212 ITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIVSLTQLNLSQNCKLTDKTL 266
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 46/319 (14%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M + F L+ L +++ +T + L G+ L L++ C +T A +++ +++ L
Sbjct: 1 MKAISGFINLKELQISN-SSITDLGISYLRGLQKLSTLNVEGC-SITAACFEYISALAAL 58
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ--- 199
L L+ GL+ DG S L L L L +TD L L+ LTKLEYL+L Q
Sbjct: 59 ACLNLNRCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQIGD 118
Query: 200 ---------------------VSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSL 233
V N G + +L LNL++T VT +L +++L
Sbjct: 119 EGLVNLTGLTLLKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLTNL 178
Query: 234 ECLNLSNCTI-DSILEGNENKAPL-------AKISLAGTTFINEREAFLYIETSLLSFLD 285
+ LNL I D+ L + + L A+I+ +GTT++ + +E D
Sbjct: 179 KSLNLDARQITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICGGLLTD 238
Query: 286 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
++ LTQ+ ++ L+ D ++E+++ + A LR+LN+SN+R ++ G+
Sbjct: 239 AGVKNIREIVSLTQLNLSQNCKLT-----DKTLELISGMTA-LRSLNVSNSRVTNEGLRY 292
Query: 346 LAGHLPNLEILSLSGTQID 364
L L NL LSL +++
Sbjct: 293 LK-PLKNLRTLSLESCKVN 310
>gi|290984426|ref|XP_002674928.1| predicted protein [Naegleria gruberi]
gi|284088521|gb|EFC42184.1| predicted protein [Naegleria gruberi]
Length = 612
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 185/408 (45%), Gaps = 35/408 (8%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
Y+G F L LN+ C + L +++ + L L +S +++ G K++ ++ L
Sbjct: 227 YIGKFEQLTCLNINTCS-IDDKVLQSISQLKKLIVLHISEN-EISIEGAKYISKLNQLTS 284
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L++SE+G+ ++ +S L+ L+ LD+ V + + ++ + KL L + + V +G
Sbjct: 285 LYISESGIRSEQARYISELKQLTYLDVTKNYVREEGAKYIRNMKKLTTLLVSENYVCEQG 344
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAG 263
A + +L+ L+++ + K L T SILE + + L IS L
Sbjct: 345 AEYISEMTQLTKLDISVNNINKK---GVFHICKLKQLTELSILESHFDGEGLEYISELKN 401
Query: 264 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 323
T +N F Y E + +++Q+ L L++ + I D+ + ++
Sbjct: 402 LTILN----FPYSEMRGVGVK-----------YISQLNQLTCLNIPYNRISDEGAKYISE 446
Query: 324 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
+ L+ L++S+ SS G L L NL L ++G + + ++S + L +DIS
Sbjct: 447 L-KQLKELSISDNSISSEGANYLT-DLKNLTKLVITGNNLGNDGAMHISELKKLTILDIS 504
Query: 384 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
+ I GA+ L +L +L L ++ + + +S K+L HL +
Sbjct: 505 HNSISS----EGAK--------HLSDLKNLTELVIKGNNLGNDGAMSISELKQLTHLDVC 552
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+ +++D +S +++LT LSI + ++ G+ + +D+
Sbjct: 553 DNNISDEGFKAISKMNQLTRLSIYENSISGEGVEFIRKMTQSTFIDIQ 600
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 195/439 (44%), Gaps = 39/439 (8%)
Query: 78 VDAEWMAYLGAFRYLRSLNVA----DCRRVTSSA-LWALTGMTCLKELDLSRCVKVTDAG 132
+D+E + Y+G + L SL + D V S A L LT + S VK+
Sbjct: 98 IDSESVTYIGQLKQLTSLEIQGMDIDDEHVESMAELKQLTSLYISGNYIGSEGVKIISE- 156
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLE 191
S + L KL +S + G +S L+ L+ L++ + D + L L L
Sbjct: 157 -----SFNKLTKLNISANYIDNVGAKYISQLKQLTSLEIACNDSIGDAGIIYLSGLEHLT 211
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDSI-LE 248
LD+ ++ + GA + F +L+ LN+ + L +IS L+ L + + + + I +E
Sbjct: 212 NLDISRIKIGSGGAQYIGKFEQLTCLNINTCSIDDKVLQSISQLKKLIVLHISENEISIE 271
Query: 249 GNENKAPLAKISLAGTTFINER----EAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQMK 301
G ++K++ + +I+E E YI E L++LDV+ + + ++ MK
Sbjct: 272 G---AKYISKLNQLTSLYISESGIRSEQARYISELKQLTYLDVTKNYVREEGAKYIRNMK 328
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
L L +S + + + E ++ + L L++S + GV + L L LS+ +
Sbjct: 329 KLTTLLVSENYVCEQGAEYISEM-TQLTKLDISVNNINKKGVFHIC-KLKQLTELSILES 386
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
D + Y+S + +L ++ ++++G + + + LN L LN+
Sbjct: 387 HFDGEGLEYISELKNLTILNFPYSEMRG------------VGVKYISQLNQLTCLNIPYN 434
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 481
++SD +S K+L LS+ + S++ + L+ L LT L I L N G
Sbjct: 435 RISDEGAKYISELKQLKELSISDNSISSEGANYLTDLKNLTKLVITGNNLGNDGAMHISE 494
Query: 482 PRSLKLLDLHGGWLLTEDA 500
+ L +LD+ + +E A
Sbjct: 495 LKKLTILDISHNSISSEGA 513
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLN--VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
E+ D E + Y+ + L LN ++ R V + L +TCL + +R ++D G
Sbjct: 385 ESHFDGEGLEYISELKNLTILNFPYSEMRGVGVKYISQLNQLTCLN-IPYNR---ISDEG 440
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
K++ + L++L +S+ ++++G L+ L+NL+ L + G + + + L KL
Sbjct: 441 AKYISELKQLKELSISDNSISSEGANYLTDLKNLTKLVITGNNLGNDGAMHISELKKLTI 500
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTI 243
LD+ + +S+ GA L L+ L NL G + + L L++ + I
Sbjct: 501 LDISHNSISSEGAKHLSDLKNLTELVIKGNNLGNDGAMSISELKQLTHLDVCDNNI 556
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE----TDL 400
IL + NL I + G +ID +++Y+ + L ++I DI + AE T L
Sbjct: 80 ILMKSVTNLCIPYVVGVKIDSESVTYIGQLKQLTSLEIQGMDIDDEHVESMAELKQLTSL 139
Query: 401 VLSLTAL---------QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDV 450
+S + ++ N L +LN+ + + +S K+L L + N S+ D
Sbjct: 140 YISGNYIGSEGVKIISESFNKLTKLNISANYIDNVGAKYISQLKQLTSLEIACNDSIGDA 199
Query: 451 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPR 510
+ LS L LTNL I + + G L L+++ + +D +LQ +
Sbjct: 200 GIIYLSGLEHLTNLDISRIKIGSGGAQYIGKFEQLTCLNINTCSI--DDKVLQSISQLKK 257
Query: 511 IEVWH 515
+ V H
Sbjct: 258 LIVLH 262
>gi|290977840|ref|XP_002671645.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
gi|284085215|gb|EFC38901.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
Length = 392
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-GI-LAGHLPNL 353
+L++MK L +LD+S + IG+D + + C G +R L N ++ GV G+ G L L
Sbjct: 150 YLSKMKQLTYLDISHNKIGEDGSKFI-CNG--IRQLTHLNIYYNEIGVRGVKFIGALKQL 206
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
L++ G +I D I ++ M L ++ISN +I+ GA+ LV +T L NLN
Sbjct: 207 TSLNVGGNRIGDQGIEHLMRMHQLVDLNISNNNIR----VEGAK--LVSEMTQLTNLN-- 258
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
+ + + D +S K+LI L + L++ +S + LTNL IR +
Sbjct: 259 ----IRKNIIGDDGAKYISEMKQLIKLDIGKNYLSNRGAKYISEMKYLTNLDIRSNNIRE 314
Query: 474 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 509
G + L L+L+G + +T++ I C ++
Sbjct: 315 EGAEFIGEMKQLTNLNLNGNY-ITDEGIKHLCGLYQ 349
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 39/295 (13%)
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
R+ + DC+ +++ L +LD+ + + D G+ ++ +++ L KL +S +
Sbjct: 91 RNETIFDCK------IFSAMMKNRLVDLDM-KMNNIGDIGVSYISNLTKLTKLNVSYNRI 143
Query: 153 TADGIALLSSLQNLSVLDLG----GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+++G LS ++ L+ LD+ G + + ++ LT +L+++ +++ RG +
Sbjct: 144 SSEGAKYLSKMKQLTYLDISHNKIGEDGSKFICNGIRQLT---HLNIYYNEIGVRGVKFI 200
Query: 209 KMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 263
+L+ LN+ G+ L + L LN+SN I +EG A L +
Sbjct: 201 GALKQLTSLNVGGNRIGDQGIEHLMRMHQLVDLNISNNNIR--VEG----AKLVS-EMTQ 253
Query: 264 TTFINEREAFL------YI-ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIG 314
T +N R+ + YI E L LD+ + LS ++++MK L +LD+ S+ I
Sbjct: 254 LTNLNIRKNIIGDDGAKYISEMKQLIKLDIGKNYLSNRGAKYISEMKYLTNLDIRSNNIR 313
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYA 367
++ E + + L NLNL+ + G+ L G L +L I + +G Q++D A
Sbjct: 314 EEGAEFIGEM-KQLTNLNLNGNYITDEGIKHLCGLYQLVSLSIYN-TGIQMEDGA 366
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + ++GA + L SLNV R+ + L M L +L++S + G K
Sbjct: 190 NEIGVRGVKFIGALKQLTSLNVGG-NRIGDQGIEHLMRMHQLVDLNISNN-NIRVEGAKL 247
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ ++ L L + + + DG +S ++ L LD+G +++ + + + L LD+
Sbjct: 248 VSEMTQLTNLNIRKNIIGDDGAKYISEMKQLIKLDIGKNYLSNRGAKYISEMKYLTNLDI 307
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+ + GA + +L+ LNL +T
Sbjct: 308 RSNNIREEGAEFIGEMKQLTNLNLNGNYIT 337
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 14/192 (7%)
Query: 322 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 381
A + L +L++ GV ++ +L L L++S +I Y+S M L ++D
Sbjct: 103 AMMKNRLVDLDMKMNNIGDIGVSYIS-NLTKLTKLNVSYNRISSEGAKYLSKMKQLTYLD 161
Query: 382 ISNTDI-----KGFIQQVGAETDL--------VLSLTALQNLNHLERLNLEQTQVSDATL 428
IS+ I K + T L V + + L L LN+ ++ D +
Sbjct: 162 ISHNKIGEDGSKFICNGIRQLTHLNIYYNEIGVRGVKFIGALKQLTSLNVGGNRIGDQGI 221
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
L +L+ L++ N ++ +S +++LTNL+IR ++ + G + L L
Sbjct: 222 EHLMRMHQLVDLNISNNNIRVEGAKLVSEMTQLTNLNIRKNIIGDDGAKYISEMKQLIKL 281
Query: 489 DLHGGWLLTEDA 500
D+ +L A
Sbjct: 282 DIGKNYLSNRGA 293
>gi|300704275|ref|YP_003745878.1| leucine-rich-repeat type III effector protein (gala6) [Ralstonia
solanacearum CFBP2957]
gi|299071939|emb|CBJ43268.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum CFBP2957]
Length = 519
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 186/432 (43%), Gaps = 31/432 (7%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK--VTDAGMKHL 136
D A+LG + L S+ +T AL AL ++ LD+SRC V++AG+ HL
Sbjct: 23 DPAMFAHLGKYPALTSVRFKG--ELTLEALKALP--PGVEHLDISRCTGRGVSNAGLAHL 78
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+ L+ L L+ + A+G LL++ +L+ L L G + D +L + LDL
Sbjct: 79 -ATRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQSRSIASLDLS 137
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI-DSILEGN 250
+ + GA L P +S LNL G+ L +L+ LN SN I D+ + G
Sbjct: 138 VNMIGPDGARALASAPLVS-LNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGF 196
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDL 308
+ L +++LAG I A + L+ LD+S + L L ++L L++
Sbjct: 197 ADNTVLTQLNLAG-NMIGPAGARALRRNTSLTELDLSTNRLGDAGAQALAGSRSLTSLNV 255
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
S+ IGDD E +A L++LNLS G G L G L L L ID Y
Sbjct: 256 RSNEIGDDGTEALA-RNTTLKSLNLSYNPIGFWGAGALGGST-TLRELDLRCCAIDPYGA 313
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
S ++ SL + + + I GA AL L L+L + + DA
Sbjct: 314 SALARNTSLASLHLGSN----RIGDDGAR--------ALATSRTLTLLDLSRNNIHDAGA 361
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
L+ L L+L + D L+ +LT+L++ + +G +L L
Sbjct: 362 QALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNLGRNRIGPNGAQHLAKSATLTEL 421
Query: 489 DLHGGWLLTEDA 500
DL L E A
Sbjct: 422 DLSENRLGPEGA 433
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 134/339 (39%), Gaps = 56/339 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS---------RCVK- 127
+DAE L L SL++ C + A AL + LDLS R +
Sbjct: 93 IDAEGARLLATCASLTSLSLTGCS-IGDRAATALAQSRSIASLDLSVNMIGPDGARALAS 151
Query: 128 ------------VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ D G L + TL+ L S G+ G+ + L+ L+L G
Sbjct: 152 APLVSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNM 211
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNI 230
+ R+L+ T L LDL +++ + GA L L+ LN + G L
Sbjct: 212 IGPAGARALRRNTSLTELDLSTNRLGDAGAQALAGSRSLTSLNVRSNEIGDDGTEALARN 271
Query: 231 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
++L+ LNLS I G +L G+T + E LD+ +
Sbjct: 272 TTLKSLNLSYNPIGFWGAG----------ALGGSTTLRE--------------LDLRCCA 307
Query: 291 LSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
+ + L + +L L L S+ IGDD +A L L+LS AG LAG
Sbjct: 308 IDPYGASALARNTSLASLHLGSNRIGDDGARALA-TSRTLTLLDLSRNNIHDAGAQALAG 366
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
+ +L L+L G ++DD + ++ P L +++ I
Sbjct: 367 N-GSLTSLNLYGNEVDDDGAAALAQHPRLTSLNLGRNRI 404
>gi|46447141|ref|YP_008506.1| hypothetical protein pc1507 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400782|emb|CAF24231.1| hypothetical protein pc1507 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 623
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 169/372 (45%), Gaps = 72/372 (19%)
Query: 56 FPSLLEVFKHNAEAIELRGENS--VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
F +L F + EA+ EN+ DA +A L + L+ L + C +T + L L+
Sbjct: 256 FEKILNYFSNEVEALNF-SENAHLTDAHLLA-LKTCKNLKVLYLKKCCNLTDAGLSHLSP 313
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET----------------------- 150
+ L+ L+LS C ++TDAG+ HL S+ L+ L LSE
Sbjct: 314 LVALQHLELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLS 373
Query: 151 ---GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGA 205
T G+A L+ L L L+LG +TD L L L L++L+L W S +++ G
Sbjct: 374 WCYNFTHAGLAHLTPLVALQHLNLGHCRNITDAGLAHLSPLVALQHLNLGWCSNLTDAGL 433
Query: 206 AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
A L L L+L W G+ L ++ +L+ L+LS C + G + +PL +
Sbjct: 434 AHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD-AGLAHLSPLVAL 492
Query: 260 S-LAGTTFINEREAFLYIETSL--LSFLDVS---NSSLSRFCFLTQMKALEHLDLS---- 309
L + ++ ++A L T L L +L+++ N + + LT + AL+HLDLS
Sbjct: 493 QHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPN 552
Query: 310 ---------SSMIGDDSVEMVACVG------------ANLRNLNLSNT-RFSSAGVGILA 347
+S++ ++M C NLR+LNL+ + + AG+ LA
Sbjct: 553 LTGTGLAHLNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLA 612
Query: 348 GHLPNLEILSLS 359
L LE L LS
Sbjct: 613 P-LVALEHLDLS 623
>gi|290979790|ref|XP_002672616.1| predicted protein [Naegleria gruberi]
gi|284086194|gb|EFC39872.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 173/392 (44%), Gaps = 47/392 (11%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N + E + + L SL+++D + ++ M L L++S ++ D G K
Sbjct: 204 DNRICVEGAKSISEMKQLTSLSISD-NEIGVVGAKLISEMNQLTLLNISNN-EIGDEGAK 261
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ + L L +S + +G +S ++ L+ L++ + D ++ + + +L LD
Sbjct: 262 FISEMKQLISLDISNNLIDIEGAKSISEMKQLTSLEIYYNEIGDEGVKFISKMEQLTSLD 321
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNCTIDSILEG 249
+ G+Q+ GA + +L+FL + G + + L LN+ I G
Sbjct: 322 ISGNQIGVGGAKSISEMKQLTFLQIFSNRIGDEGANSISEMKQLTSLNIYYNQI-----G 376
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLD 307
+E G FI+E E L+ LD+ + + +++MK L L
Sbjct: 377 DE-----------GVKFISEMEQ--------LTSLDIGGNQIGVGGAKSISEMKQLTFLQ 417
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
+ S+ IGD+ V+ ++ + L +LN+S R G ++ + L +L +S +I D
Sbjct: 418 IFSNRIGDEGVKFISEM-KQLTSLNISGNRIGDEGAKSIS-EMKQLTLLYISSNEIGDEG 475
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 427
+ ++S M L + I + ++G E + ++ + L LN+ ++ D
Sbjct: 476 VKFISEMKQLTLLQI-------YSNRIGDE-----GVKSISEMKQLTSLNISGNRIGDEG 523
Query: 428 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+ +S K+L L++ N + D + L+SL+
Sbjct: 524 VKSISEMKQLTSLNISNNRIGDEGVKLLTSLN 555
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 188/431 (43%), Gaps = 43/431 (9%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
++ + L SL +A+ R+ + ++ M L LD+ C ++ G + + L
Sbjct: 118 FISEMKQLTSLGIAE-NRIGDEGVKFISEMKQLTLLDIC-CNEIGVEGATSISEMKQLTS 175
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L +S + +G L+S ++ L++L++ + +S+ + +L L + +++ G
Sbjct: 176 LNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSISDNEIGVVG 235
Query: 205 AAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK- 258
A ++ +L+ LN++ G + + L L++SN ID +EG ++ + + +
Sbjct: 236 AKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLID--IEGAKSISEMKQL 293
Query: 259 ---------ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLD 307
I G FI++ E L+ LD+S + + +++MK L L
Sbjct: 294 TSLEIYYNEIGDEGVKFISKMEQ--------LTSLDISGNQIGVGGAKSISEMKQLTFLQ 345
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
+ S+ IGD+ ++ + L +LN+ + GV ++ + L L + G QI
Sbjct: 346 IFSNRIGDEGANSISEM-KQLTSLNIYYNQIGDEGVKFIS-EMEQLTSLDIGGNQIGVGG 403
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 427
+S M L F+ I F ++G E + + + L LN+ ++ D
Sbjct: 404 AKSISEMKQLTFLQI-------FSNRIGDE-----GVKFISEMKQLTSLNISGNRIGDEG 451
Query: 428 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 487
+S K+L L + + + D + +S + +LT L I + + G+ S + L
Sbjct: 452 AKSISEMKQLTLLYISSNEIGDEGVKFISEMKQLTLLQIYSNRIGDEGVKSISEMKQLTS 511
Query: 488 LDLHGGWLLTE 498
L++ G + E
Sbjct: 512 LNISGNRIGDE 522
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 163/365 (44%), Gaps = 27/365 (7%)
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L ++E + +G+ +S ++ L++LD+ + S+ + +L L
Sbjct: 117 KFISEMKQLTSLGIAENRIGDEGVKFISEMKQLTLLDICCNEIGVEGATSISEMKQLTSL 176
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLPNISSLECLNLSNCTIDSI-- 246
++ G+++ + GA ++ +L+ LN+A G + + L L++S+ I +
Sbjct: 177 NISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSISDNEIGVVGA 236
Query: 247 -LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS--SLSRFCFLTQMKAL 303
L N+ L IS I + A E L LD+SN+ + +++MK L
Sbjct: 237 KLISEMNQLTLLNIS---NNEIGDEGAKFISEMKQLISLDISNNLIDIEGAKSISEMKQL 293
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
L++ + IGD+ V+ ++ + L +L++S + G ++ + L L + +I
Sbjct: 294 TSLEIYYNEIGDEGVKFISKM-EQLTSLDISGNQIGVGGAKSIS-EMKQLTFLQIFSNRI 351
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
D + +S M L ++I + Q+G E + + + L L++ Q+
Sbjct: 352 GDEGANSISEMKQLTSLNI-------YYNQIGDE-----GVKFISEMEQLTSLDIGGNQI 399
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 483
+S K+L L + + + D + +S + +LT+L+I + + G S +
Sbjct: 400 GVGGAKSISEMKQLTFLQIFSNRIGDEGVKFISEMKQLTSLNISGNRIGDEGAKSISEMK 459
Query: 484 SLKLL 488
L LL
Sbjct: 460 QLTLL 464
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 159/358 (44%), Gaps = 31/358 (8%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
D +S ++ L+ L + + D ++ + + +L LD+ +++ GA + +L
Sbjct: 114 DNAKFISEMKQLTSLGIAENRIGDEGVKFISEMKQLTLLDICCNEIGVEGATSISEMKQL 173
Query: 215 SFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
+ LN++ G + + L LN+++ I +EG ++ + + +++ + I++
Sbjct: 174 TSLNISGNRIGDEGAKLISEMKQLTLLNIADNRI--CVEGAKSISEMKQLT---SLSISD 228
Query: 270 RE-----AFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVA 322
E A L E + L+ L++SN+ + F+++MK L LD+S+++I + + ++
Sbjct: 229 NEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLIDIEGAKSIS 288
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
+ L +L + GV ++ + L L +SG QI +S M L F+ I
Sbjct: 289 EM-KQLTSLEIYYNEIGDEGVKFIS-KMEQLTSLDISGNQIGVGGAKSISEMKQLTFLQI 346
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
F ++G E ++ + L LN+ Q+ D + +S ++L L +
Sbjct: 347 -------FSNRIGDE-----GANSISEMKQLTSLNIYYNQIGDEGVKFISEMEQLTSLDI 394
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
+ +S + +LT L I + + G+ + L L++ G + E A
Sbjct: 395 GGNQIGVGGAKSISEMKQLTFLQIFSNRIGDEGVKFISEMKQLTSLNISGNRIGDEGA 452
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV--GILA 347
SL F+++MK L L ++ + IGD+ V+ ++ ++ L L + + GV
Sbjct: 112 SLDNAKFISEMKQLTSLGIAENRIGDEGVKFIS----EMKQLTLLDICCNEIGVEGATSI 167
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF--IQQVGAETDL--- 400
+ L L++SG +I D +S M L ++I++ I +G I ++ T L
Sbjct: 168 SEMKQLTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSIS 227
Query: 401 -----VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
V+ + +N L LN+ ++ D +S K+LI L + N + +
Sbjct: 228 DNEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLIDIEGAKSI 287
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
S + +LT+L I + + G+ L LD+ G +
Sbjct: 288 SEMKQLTSLEIYYNEIGDEGVKFISKMEQLTSLDISGNQI 327
>gi|390335362|ref|XP_003724129.1| PREDICTED: uncharacterized protein LOC100890653 [Strongylocentrotus
purpuratus]
Length = 990
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 199/436 (45%), Gaps = 48/436 (11%)
Query: 34 LERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYLGAFRYL 92
LE +P +A+ LL L + + P L +F + + + L E + + +L
Sbjct: 586 LEAVPPTVAERLLTELKKSGHLRPKTLMMFIPCHLQRLALDCYKYTTNELLQTVRPHIHL 645
Query: 93 RSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
SLN+A C +T L +T + L+ L+LS +TD + + S+L L L TG+
Sbjct: 646 SSLNLASCPLITDQGLLQITSLKKLQHLNLSNNKSLTDKVFQTVQEFSSLTTLLLEGTGV 705
Query: 153 TADGIALLSSL--QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
T G+ ++ NL+ L L VTD+ + L L+KL+ L L +QV + +
Sbjct: 706 TDAGLETFVAVPPPNLTNLSLNRTNVTDMAVLFLARLSKLKNLGLEQTQV--KSLEHVGH 763
Query: 211 FPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
+L LN++ + KL ++ L+ L++S+ ++ I G+E A L G
Sbjct: 764 LSQLVSLNVSRNRLQRDALLKLHQVTHLKVLHISH--VEGIT-GDE-----ALTCLQGLQ 815
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACV 324
+ LS D ++ + + M +L +DL+ S I D + +A +
Sbjct: 816 LMQ------------LSLPDRHTTTDNGLKCIAGM-SLCSIDLTDYSNITDAGIHHLADM 862
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
+L L+++NT+ +SAG+ L+G L L L L T +DD + + L+ + ++
Sbjct: 863 -TSLHKLSITNTKVTSAGMQYLSG-LTELLELHLDRTLVDDEGAKVIGQLTKLQVLSMAE 920
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
T I TD L + + H+ RLNL +T +S+ + LS L +L+L N
Sbjct: 921 TKI----------TDRFLLSNVINSCPHISRLNLSRTNISERGITVLS----LPYLTLLN 966
Query: 445 ASLTDVSLHQLSSLSK 460
T VS+ L+K
Sbjct: 967 LDYTCVSVDCAQHLTK 982
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-GILAGHLPNLEI 355
+T +K L+HL+LS++ D V ++L L L T + AG+ +A PNL
Sbjct: 664 ITSLKKLQHLNLSNNKSLTDKVFQTVQEFSSLTTLLLEGTGVTDAGLETFVAVPPPNLTN 723
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL-----------SL 404
LSL+ T + D A+ +++ + LK + + T +K ++ VG + LV +L
Sbjct: 724 LSLNRTNVTDMAVLFLARLSKLKNLGLEQTQVKS-LEHVGHLSQLVSLNVSRNRLQRDAL 782
Query: 405 TALQNLNHLERLNLEQTQ--VSDATLFPLSTFKELIHLSLRN------------------ 444
L + HL+ L++ + D L L +L+ LSL +
Sbjct: 783 LKLHQVTHLKVLHISHVEGITGDEALTCLQGL-QLMQLSLPDRHTTTDNGLKCIAGMSLC 841
Query: 445 -------ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+++TD +H L+ ++ L LSI + +T++G+
Sbjct: 842 SIDLTDYSNITDAGIHHLADMTSLHKLSITNTKVTSAGM 880
>gi|290972542|ref|XP_002669011.1| predicted protein [Naegleria gruberi]
gi|284082551|gb|EFC36267.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 21/282 (7%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L L ++RC + D G ++ + ++ L E G+ + G + ++NL++L+L G +
Sbjct: 42 LTNLSINRC-SIADLGTNNISQLKQIKYLRACENGIGSIGARNIGEMKNLTLLELSGNRI 100
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
D L S+ L+KL YLDL ++++++G L +L LNL +T L IS L+
Sbjct: 101 GDDGLESIGKLSKLAYLDLGENEITDQGLKSLNNLEKLVTLNLKNNKITNLETISHLKLT 160
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINERE------AFLYIETSLLSFLDVSN-- 288
NL + T + I GNE +A++ IN+ L T L N
Sbjct: 161 NL-DVTTNKI--GNEGAKYIAEMKRLKVLRINDNHITSDGAKILSGMTQLTCIFLCDNLI 217
Query: 289 ---SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
+LS + + LE+LDL + I + ++ + C NLR L++S+ + S G
Sbjct: 218 GDEGALS----IGLLYNLEYLDLKGAGITGEGLKTI-CELINLRRLHVSHNQISDLGAKY 272
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
++G + NL L++ I ++S M SL +DI+ ++
Sbjct: 273 ISG-MNNLTALNVCDCNIGFEGAQFISNMQSLADLDITKNNL 313
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 159/359 (44%), Gaps = 47/359 (13%)
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
S L +L ++ + LT L++ L NL+ L + + DL ++ L +++YL +
Sbjct: 16 SKLTELCINSSELTPQSAHLIAKLSNLTNLSINRCSIADLGTNNISQLKQIKYLRACENG 75
Query: 200 VSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKA 254
+ + GA + L+ L L+ G+ + +S L L+L EN
Sbjct: 76 IGSIGARNIGEMKNLTLLELSGNRIGDDGLESIGKLSKLAYLDLG-----------EN-- 122
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
+I+ G +N E + L++ N+ ++ ++ +K L +LD++++ IG
Sbjct: 123 ---EITDQGLKSLNNLEKLVT--------LNLKNNKITNLETISHLK-LTNLDVTTNKIG 170
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
++ + +A + L+ L +++ +S G IL+G + L + L I D + ++
Sbjct: 171 NEGAKYIAEM-KRLKVLRINDNHITSDGAKILSG-MTQLTCIFLCDNLIGDEGALSIGLL 228
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
+L+++D+ I G L + L +L RL++ Q+SD +S
Sbjct: 229 YNLEYLDLKGAGITGE------------GLKTICELINLRRLHVSHNQISDLGAKYISGM 276
Query: 435 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG---SFKPPRSLKLLDL 490
L L++ + ++ +S++ L +L I LT +G+ + K + LK L +
Sbjct: 277 NNLTALNVCDCNIGFEGAQFISNMQSLADLDITKNNLTTNGIKLCRNMKTSKKLKYLKI 335
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-IQQVGAETDLVL-- 402
L L NL LS++ I D + +S + +K++ I + +G +L L
Sbjct: 35 LIAKLSNLTNLSINRCSIADLGTNNISQLKQIKYLRACENGIGSIGARNIGEMKNLTLLE 94
Query: 403 ---------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
L ++ L+ L L+L + +++D L L+ ++L+ L+L+N +T+ L
Sbjct: 95 LSGNRIGDDGLESIGKLSKLAYLDLGENEITDQGLKSLNNLEKLVTLNLKNNKITN--LE 152
Query: 454 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
+S L KLTNL + + N G + LK+L ++ + ++ A
Sbjct: 153 TISHL-KLTNLDVTTNKIGNEGAKYIAEMKRLKVLRINDNHITSDGA 198
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA--GM 133
N + E Y+ + L+ L + D +TS L+GMT L C+ + D G
Sbjct: 167 NKIGNEGAKYIAEMKRLKVLRIND-NHITSDGAKILSGMTQL------TCIFLCDNLIGD 219
Query: 134 KHLLSIS---TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
+ LSI LE L L G+T +G+ + L NL L + ++DL + + + L
Sbjct: 220 EGALSIGLLYNLEYLDLKGAGITGEGLKTICELINLRRLHVSHNQISDLGAKYISGMNNL 279
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L++ + GA + L+ L++ +T
Sbjct: 280 TALNVCDCNIGFEGAQFISNMQSLADLDITKNNLT 314
>gi|386333663|ref|YP_006029833.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334196112|gb|AEG69297.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 629
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 173/393 (44%), Gaps = 31/393 (7%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK--VTDAGMKHLLSIST 141
LG + L+S+ +T AL AL ++ LD+SRC V++AG+ LL+
Sbjct: 138 GQLGKYPALKSVRFKGA--LTLEALKALP--PGVEHLDISRCTGSGVSNAGLA-LLATRP 192
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L+ L L+ + A+G LL++ +L+ L L G + D +L + LDL + +
Sbjct: 193 LKSLSLNGIEIDAEGARLLATCTSLTSLSLTGCSIGDRAATALARSRSIASLDLSVNMIG 252
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGNENKAP 255
GA L P L+ LNL G+ L +L+ LN SN I D+ + G + A
Sbjct: 253 PDGARALAGAP-LASLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNAV 311
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMI 313
L +++LAG L TS L+ LD+S + L L ++L L+L + I
Sbjct: 312 LTQLNLAGNMIGPAGARALRCNTS-LTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEI 370
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
GDD E +A L++LNLS G G L G L L L ID Y S ++
Sbjct: 371 GDDGTEALA-RNTTLKSLNLSYNPIGFWGAGALGGST-TLRELDLRCCAIDPYGASALAR 428
Query: 374 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 433
SL + + + I GA A+ L L+L + + DA L+
Sbjct: 429 NTSLASLHLGSN----RIGDSGAR--------AIATSRTLTLLDLSRNNIHDAGAQALAG 476
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L L+L + D L+ +LT+L++
Sbjct: 477 NGSLTSLNLYGNEVDDDGAAALAHHPRLTSLNL 509
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
AL G T L+ELDL RC + G L ++L L L + G +++ + L++L
Sbjct: 401 ALGGSTTLRELDL-RCCAIDPYGASALARNTSLASLHLGSNRIGDSGARAIATSRTLTLL 459
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGV 224
DL + D ++L L L+L+G++V + GAA L PRL+ LNL G
Sbjct: 460 DLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAHHPRLTSLNLGRNRIGPNGA 519
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF------INEREAFLYIET 278
L ++L L+LS I G E L+ +S TT I E+ A + E
Sbjct: 520 QHLAKSATLTELDLSENRI-----GPEGADALS-LSTVLTTLNVSDNAIGEKGARAFAEK 573
Query: 279 SL-LSFLDVSNSSL 291
S L+ LD N+ +
Sbjct: 574 STSLTSLDARNNGM 587
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 33/267 (12%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ D G L + TL+ L S G+ G+ + L+ L+L G + R+L+
Sbjct: 274 IGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNAVLTQLNLAGNMIGPAGARALRCN 333
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 242
T L LDL +++ + GA VL L+ LNL G L ++L+ LNLS
Sbjct: 334 TSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALARNTTLKSLNLSYNP 393
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQM 300
I G +L G+T + E LD+ ++ + L +
Sbjct: 394 IGFWGAG----------ALGGSTTLRE--------------LDLRCCAIDPYGASALARN 429
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+L L L S+ IGD +A L L+LS AG LAG+ +L L+L G
Sbjct: 430 TSLASLHLGSNRIGDSGARAIATS-RTLTLLDLSRNNIHDAGAQALAGN-GSLTSLNLYG 487
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDI 387
++DD + ++ P L +++ I
Sbjct: 488 NEVDDDGAAALAHHPRLTSLNLGRNRI 514
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 33/270 (12%)
Query: 233 LECLNLSNCTIDSILEGNENKA-----PLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+E L++S CT + N A PL +SL G E L TSL S L ++
Sbjct: 167 VEHLDISRCTGSGV--SNAGLALLATRPLKSLSLNGIEIDAEGARLLATCTSLTS-LSLT 223
Query: 288 NSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
S+ L + +++ LDLS +MIG D +A GA L +LNL N G
Sbjct: 224 GCSIGDRAATALARSRSIASLDLSVNMIGPDGARALA--GAPLASLNLHNNGIGDEGALA 281
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID---ISNTDIKG-FIQQVGAETDLV 401
LA L+ L+ S I D + L F D ++ ++ G I GA
Sbjct: 282 LATS-GTLKSLNASNNGIGDAGV--------LGFADNAVLTQLNLAGNMIGPAGAR---- 328
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
AL+ L L+L ++ DA L+ + L L+LR+ + D L+ + L
Sbjct: 329 ----ALRCNTSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALARNTTL 384
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+L++ + G G+ +L+ LDL
Sbjct: 385 KSLNLSYNPIGFWGAGALGGSTTLRELDLR 414
>gi|46447283|ref|YP_008648.1| hypothetical protein pc1649 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400924|emb|CAF24373.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 521
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + ++L+ + + +A L + L+ LN+ C+++T + L LT + L+ LDL C
Sbjct: 316 NLKVLQLQSCHHLTDTGLACLPSLTNLQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFC 375
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRS 183
K+T G+ H S+ L+ L LS D G+A L+ L L L+L +TD L
Sbjct: 376 DKLTSKGLGHFKSLIALQHLNLSGCKFIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAH 435
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L L L++LDL W + ++N G A L L +LNL+ G+ L ++SL+ L
Sbjct: 436 LVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLSGCIYLSEAGLAHLAPLTSLQHL 495
Query: 237 NLSNC 241
NL +C
Sbjct: 496 NLEDC 500
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 56 FPSLLEVFKHNAEAIELRGENS--VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG 113
F +L F + E + EN+ DA +A L + L+ L + C +T + L L
Sbjct: 281 FEKILNYFSNEIEGLNF-SENAYLTDAHLLA-LKNCKNLKVLQLQSCHHLTDTGLACLPS 338
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 172
+T L+ L+L+ C K+TDAG+ HL + L+ L L LT+ G+ SL L L+L
Sbjct: 339 LTNLQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLS 398
Query: 173 GLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 224
G + D L L L L+YL+L + +++ G A L L L+L+W G+
Sbjct: 399 GCKFIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGL 458
Query: 225 TKLPNISSLECLNLSNC 241
L ++ +L+ LNLS C
Sbjct: 459 AHLVHLVALQYLNLSGC 475
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGLP-VT 177
L+ S +TDA + L + L+ L L S LT G+A L SL NL L+L G +T
Sbjct: 295 LNFSENAYLTDAHLLALKNCKNLKVLQLQSCHHLTDTGLACLPSLTNLQYLNLNGCKKLT 354
Query: 178 DLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNI 230
D L L L L+YLDL + +++++G K L LNL+ G+ L +
Sbjct: 355 DAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGCKFIRDNGLAHLTPL 414
Query: 231 SSLECLNLSNCTI 243
+L+ LNLS CT
Sbjct: 415 VALQYLNLSQCTF 427
>gi|410684076|ref|YP_006060083.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
gi|299068565|emb|CBJ39793.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
Length = 555
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 162/379 (42%), Gaps = 58/379 (15%)
Query: 117 LKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LK LDLSRC + +T AG+ HL + L +L + + +G LL++ L+ L++
Sbjct: 156 LKALDLSRCGRQITAAGIAHLSELP-LAELNVRNNWIGDEGARLLAAHPTLTTLNVASNG 214
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ D ++L T+LE LD+ SF + GV L + ++L+
Sbjct: 215 IGDAGAQALAANTRLESLDI-------------------SFNEIGSDGVQALADNATLKT 255
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
LN+S+ I ++LA T + E + TS D +L+
Sbjct: 256 LNISSNDIGDA----------GALALAVNTTLTE------LNTSCNRISDAGAQALANSD 299
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
LT LD+S + GD V+ +A LR L++S R S AGV +A + L
Sbjct: 300 SLTS------LDISDNGFGDAGVQAIAA-NTRLRRLDISRNRLSEAGVLAVAANT-TLTK 351
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L ++ +I ++ L +D + I G E L+ A L++
Sbjct: 352 LCIADCEIGTAGAQALAANTRLVSLDAGHNGI-------GTEGAQALARHAT-----LKQ 399
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LNLE+ + DA + L L+L+ +TD L L++ + L L++ D +T G
Sbjct: 400 LNLEKNPIGDAGAVAFADNATLRSLNLKGCKVTDSGLRVLATNATLRTLNVSDNRITAEG 459
Query: 476 LGSFKPPRSLKLLDL-HGG 493
+ +L LD+ H G
Sbjct: 460 AKATAANSTLTSLDVSHNG 478
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E L L+ LN+ + + + A L+ L+L C KVTD+G+
Sbjct: 379 GHNGIGTEGAQALARHATLKQLNL-EKNPIGDAGAVAFADNATLRSLNLKGC-KVTDSGL 436
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ L + +TL L +S+ +TA+G ++ L+ LD+ + D +L T L L
Sbjct: 437 RVLATNATLRTLNVSDNRITAEGAKATAANSTLTSLDVSHNGIEDEGALALAANTVLNVL 496
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
++ + ++ +G L L+ L++ G
Sbjct: 497 NICYNALTVKGVTALAASTTLAVLDIRENG 526
>gi|452824610|gb|EME31612.1| F-box and leucine-rich repeat protein GRR1 [Galdieria sulphuraria]
Length = 740
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 32/298 (10%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + L + + ++ + ++G+ + L+ L + +C RV + AL + +T L+ L+L CVK
Sbjct: 198 EFLNLSSCSRITSDALLHIGSLKNLKHLKLRNCARVDNRALEHIGNLTSLETLELYECVK 257
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS-----LQNLSVLDLGGLPVTDLVLR 182
+ D G+K+L S + L LS T ++ADGIA L+ L+NL + L + +
Sbjct: 258 IDDNGLKYLQKCSQIRHLCLSGTCISADGIASLADIFMPHLENLHLTRCSNLVGSQFSV- 316
Query: 183 SLQVLTK------LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNI 230
SL+ L+K L YL +V A+ FP+L LNL G++ L +
Sbjct: 317 SLRKLSKNMKRLQLRYLHCVDDEVLQ---AISDSFPQLESLNLTDCRYVTDRGISWLEKL 373
Query: 231 SSLECLNLSNCTID--SILEGNENKAPLAKISLAGTTFINER-EAFLYIETSLLSFLDVS 287
SSL L L ++ IL + ++++ ++ +E+ + + L LD+S
Sbjct: 374 SSLSMLKLGGTSVSDYGILRIKDLLKRISELDISSCILCSEKITSHILNNVEHLKVLDIS 433
Query: 288 NS--------SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 337
N+ SLS FL ++ + +G D + VAC+ L L LS R
Sbjct: 434 NNPQLTKNSWSLSYQNFLKRLPLKTLVIEEGGTLGKDFLTSVACLFPKLETLLLSKCR 491
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 139/310 (44%), Gaps = 54/310 (17%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L G + + M L FR L +L + C + + +L + + CLK L ++ C K++
Sbjct: 125 LDLSGCSQLSNVGMEALSYFRSLETLVLDHCSSLGNISLSYIRDIPCLKSLSIACCDKIS 184
Query: 130 DAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVL 187
+G++ L + LE L LS +T+D + + SL+NL L L V + L + L
Sbjct: 185 GSGLEQLFYLKRLEFLNLSSCSRITSDALLHIGSLKNLKHLKLRNCARVDNRALEHIGNL 244
Query: 188 TKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNI--SSLECLNLS 239
T LE L+L+ ++ + G L+ ++ L L+ T G+ L +I LE L+L+
Sbjct: 245 TSLETLELYECVKIDDNGLKYLQKCSQIRHLCLSGTCISADGIASLADIFMPHLENLHLT 304
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 299
C+ +L G+ F VS LS+ Q
Sbjct: 305 RCS-----------------NLVGSQF------------------SVSLRKLSKNMKRLQ 329
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF-SSAGVGILAGHLPNLEILSL 358
++ L +D D+ ++ ++ L +LNL++ R+ + G+ L L +L +L L
Sbjct: 330 LRYLHCVD-------DEVLQAISDSFPQLESLNLTDCRYVTDRGISWLE-KLSSLSMLKL 381
Query: 359 SGTQIDDYAI 368
GT + DY I
Sbjct: 382 GGTSVSDYGI 391
>gi|406834160|ref|ZP_11093754.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 390
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 56/302 (18%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T + L L+ + L++LDLSR K++DAG++HL ++ L +L ++ET +T G A L+
Sbjct: 125 KITDAGLKYLSSVPRLQKLDLSR-TKISDAGLEHLQTLVNLCELTIAETSVTDAGTAKLA 183
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L+NL VL++ VTD L+ + + L L L G +++ G A LK L+FL+L
Sbjct: 184 GLKNLRVLNVSKTNVTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDG 243
Query: 222 TGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
+T +L I LE L L+N D GTTF +
Sbjct: 244 IPLTGSFLKELKGI-PLEYLTLANSKCD------------------GTTFKD-------- 276
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
+ +K L+ L L + + +D+ A+L L+L NT
Sbjct: 277 --------------------VGTLKNLKMLSLENCPV-EDASIASIAAIASLETLSLDNT 315
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVG 395
+ + + L +P+L LS++ T I + + P+LK + NT + +G + +
Sbjct: 316 KITEQAIVELK-DMPSLVSLSINSTPISAEELRQLKATPNLKLVKAHNTKVTRGDVDALA 374
Query: 396 AE 397
AE
Sbjct: 375 AE 376
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
P L LSL T+I D + Y+S +P L+ +D+S T I L LQ L
Sbjct: 114 PQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRTKISDA------------GLEHLQTL 161
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
+L L + +T V+DA L+ K L L++ ++TD SL +S + L L +
Sbjct: 162 VNLCELTIAETSVTDAGTAKLAGLKNLRVLNVSKTNVTDTSLKVISEIPNLNTLILDGCN 221
Query: 471 LTNSGLGSFKPPRSLKLLDLHG 492
LT+ GL S K +SL L L G
Sbjct: 222 LTDVGLASLKDCQSLTFLSLDG 243
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 12/254 (4%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
++++ L ++ + D +A+L L L L +TD L+ L + +L+ LDL +++S
Sbjct: 92 VDQITLDQSPIGDDDLAVLKQTPQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRTKIS 151
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGNENKAP 255
+ G L+ L L +A T VT KL + +L LN+S + D+ L+
Sbjct: 152 DAGLEHLQTLVNLCELTIAETSVTDAGTAKLAGLKNLRVLNVSKTNVTDTSLKVISEIPN 211
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA--LEHLDLSSSMI 313
L + L G + A L + L+FL + L+ FL ++K LE+L L++S
Sbjct: 212 LNTLILDGCNLTDVGLASLK-DCQSLTFLSLDGIPLTG-SFLKELKGIPLEYLTLANSKC 269
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
+ + V + NL+ L+L N A + +A +LE LSL T+I + AI +
Sbjct: 270 DGTTFKDVGTL-KNLKMLSLENCPVEDASIASIAAIA-SLETLSLDNTKITEQAIVELKD 327
Query: 374 MPSLKFIDISNTDI 387
MPSL + I++T I
Sbjct: 328 MPSLVSLSINSTPI 341
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
+L+ + L+ LDLS + I D +E + + NL L ++ T + AG LAG L NL +
Sbjct: 133 YLSSVPRLQKLDLSRTKISDAGLEHLQTL-VNLCELTIAETSVTDAGTAKLAG-LKNLRV 190
Query: 356 LSLSGTQIDDYAISYMSMMP------------------------SLKFIDISNTDIKG-F 390
L++S T + D ++ +S +P SL F+ + + G F
Sbjct: 191 LNVSKTNVTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDGIPLTGSF 250
Query: 391 IQQVGAETDLVLSLTA----------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
++++ L+L + L +L+ L+LE V DA++ ++ L L
Sbjct: 251 LKELKGIPLEYLTLANSKCDGTTFKDVGTLKNLKMLSLENCPVEDASIASIAAIASLETL 310
Query: 441 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
SL N +T+ ++ +L + L +LSI ++ L K +LKL+ H
Sbjct: 311 SLDNTKITEQAIVELKDMPSLVSLSINSTPISAEELRQLKATPNLKLVKAH 361
>gi|18413537|emb|CAD21866.1| hypothetical leucine-rich repeat protein 1 (LRRP1) [Trypanosoma
brucei]
Length = 1393
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 182/416 (43%), Gaps = 68/416 (16%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L G N+ D E + L + + SLN++ C ++T+ + ++ + L EL+LS C +
Sbjct: 512 LDLSGTNT-DNESLRSLCLSQTVVSLNLSHCWKMTNVS--HISSLEALNELNLSNCFGI- 567
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+AG + + + L LS T +T I+ S+ +NL LDL L + +L +T
Sbjct: 568 NAGWEAIEKLQQLHVAILSNTHITDRDISHFSNCKNLITLDLS-FCNKLLDVTALSNITT 626
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-----VTKLPNISSLECLNLSNCTID 244
LE L+L +G +VL PRL LN+ + L N +S L+L NC
Sbjct: 627 LEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGNSFVRLSLENC--- 683
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
+G + APL+ + + +E L + D S + L Q++ L
Sbjct: 684 ---KGFGDVAPLSNL--------------VTLEELNLHYCDKVTSGMGTLGRLLQLRVL- 725
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA----------------- 347
DL + + D+S+E + + L +LNLSN + ++ I +
Sbjct: 726 --DLGRTQVDDNSLENICTCSSPLVSLNLSNCKKITSISAIASLTALEELNIDNCCNVTS 783
Query: 348 -----GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
G L L + +LS T+ +D I ++S SL ++++ F + + TD
Sbjct: 784 GWNVFGTLHQLRVATLSNTRTNDENIRHVSECKSLNTLNLA------FCKDI---TD--- 831
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + LE LNL+ + L T + LS++ + D Q S L
Sbjct: 832 -VTALSKITMLEELNLDCCHNIRKGIETLGTLPKARILSMKECYMGDGYAQQCSIL 886
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 191/446 (42%), Gaps = 89/446 (19%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L +L +S C +TDA + +S LE+L LS +T GI L L L +LDL G+PV
Sbjct: 250 LSKLSVSECNNITDA--TPISQLSALEELNLSNCHITK-GIGTLGMLLRLRILDLSGVPV 306
Query: 177 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 213
D L+ SL+ L T +E L+L G + RG V+ P+
Sbjct: 307 EDNCLKDLCDCGSLERLNISYRIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWALPK 366
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L L++ ++LS ++DS+ G PL K+SL +
Sbjct: 367 LRVLHMKD--------------VHLSEPSLDSVGTG----GPLVKVSLDNCAGFGDMTLL 408
Query: 274 LYIET----------------------SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLS 309
I T L L++ + +S F + K+L L++
Sbjct: 409 SSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNM- 467
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
S+ G +VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++
Sbjct: 468 ESITGLSNVEALANI-LTLEKLSLHGCTGIDAGIGCL-GNLPQLKMLDLSGTNTDNESLR 525
Query: 370 YMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLN 417
+ + ++ +++S+ T++ I + A +L LS A++ L L
Sbjct: 526 SLCLSQTVVSLNLSHCWKMTNV-SHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAI 584
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
L T ++D + S K LI L L + L DV+ LS+++ L L++ GL
Sbjct: 585 LSNTHITDRDISHFSNCKNLITLDLSFCNKLLDVT--ALSNITTLEELNLDSCSNIRKGL 642
Query: 477 GSFKPPRSLKLLDLHGGWLLTEDAIL 502
L +L++ G L ED+++
Sbjct: 643 SVLGELPRLCVLNIKGVQL--EDSVI 666
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 168/401 (41%), Gaps = 70/401 (17%)
Query: 111 LTGMTCLKELDLSR--CVK---VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
L M LK L + + C++ + + +HL +I TLE+L +++T + I +S L N
Sbjct: 167 LVNMISLKRLQMLKRLCLRSNNIDNNDARHLFNIGTLEELAITDT-MQLTNIRGISRLTN 225
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L L+L + D +R + KL L + S+ +N T T
Sbjct: 226 LKCLELNSTNIDDSCVRRICACVKLSKLSV--SECNN------------------ITDAT 265
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 285
+ +S+LE LNLSNC I T I L + LS +
Sbjct: 266 PISQLSALEELNLSNCHI--------------------TKGIGTLGMLLRLRILDLSGVP 305
Query: 286 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
V ++ L C +LE L++S + D + + LNL+ R + G+G+
Sbjct: 306 VEDNCLKDLC---DCGSLERLNISYRIQLTDINPLSNATA--IEELNLNGCRRITRGIGV 360
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-----------IQQV 394
+ LP L +L + + + ++ + L + + N GF ++++
Sbjct: 361 VWA-LPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNC--AGFGDMTLLSSIVTLEEL 417
Query: 395 GAE--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS- 451
+ D++ + L L +L LN+++ +S + K L+ L++ S+T +S
Sbjct: 418 NIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNME--SITGLSN 475
Query: 452 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+ L+++ L LS+ ++G+G LK+LDL G
Sbjct: 476 VEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 516
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 195/464 (42%), Gaps = 79/464 (17%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA----GMKHLLSISTLEKLWL 147
L SLN+++C+++TS + A+ +T L+EL++ C VT G H L ++TL
Sbjct: 747 LVSLNLSNCKKITS--ISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATL----- 799
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
S T + I +S ++L+ L+L +TD+ +L +T LE L+L +G
Sbjct: 800 SNTRTNDENIRHVSECKSLNTLNLAFCKDITDVT--ALSKITMLEELNLDCCHNIRKGIE 857
Query: 207 VLKMFPRLSFLNL--AWTG------VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
L P+ L++ + G + L N SL LNL ++ N A L +
Sbjct: 858 TLGTLPKARILSMKECYMGDGYAQQCSILGNSKSLVKLNLERSRGRISVKALSNVATLEE 917
Query: 259 ISL---AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
+ L I + L + D+ N +++ +++ K+L L+LS
Sbjct: 918 LVLDHARKVCCIPSFSCLPRLRVLNLKYTDI-NGDVTKN--ISESKSLRSLNLSHCKWVT 974
Query: 316 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILSLSGTQI---DDYA 367
D + + + N+N N GI G LP L + LS T+I D
Sbjct: 975 DISVLSSLLTLEELNVNCCN--------GIRKGWESLGKLPLLRVAILSDTKITAKDIAC 1026
Query: 368 ISYMSMMPSLKFI---DISNTDIKGFIQQ-----VGAETDLVLSLTALQNLNHLERLNLE 419
+S + LKF +S+ + IQ V + +D + L AL L L +L
Sbjct: 1027 LSSCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIVTSCSDGLKGLNALGTLPRLRFHHLR 1086
Query: 420 QTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 478
+ SD ++ + T K L+ L + LTD++ LS+++ L LS+RD G+G+
Sbjct: 1087 NVRGSDISVESIGTSKSLVRLHIEVGEELTDIT--PLSNITSLEELSLRDYRKPPEGVGT 1144
Query: 479 F-KPPR-----------------------SLKLLDLHGGWLLTE 498
K PR S+ L+L W LT+
Sbjct: 1145 LGKLPRLKSLDLGLSRISDSTLYCICLSRSITSLNLDSSWKLTD 1188
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 203/481 (42%), Gaps = 52/481 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L EN +A L L LN+ C +VTS + L + L+ LDL R +V
Sbjct: 676 VRLSLENCKGFGDVAPLSNLVTLEELNLHYCDKVTS-GMGTLGRLLQLRVLDLGR-TQVD 733
Query: 130 DAGMKHLLSIST-LEKLWLSE----TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
D ++++ + S+ L L LS T ++A IA L++L+ L++ + + V +L
Sbjct: 734 DNSLENICTCSSPLVSLNLSNCKKITSISA--IASLTALEELNIDNCCNVTSGWNVFGTL 791
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSN 240
+L L ++ ++ + L+ LNLA+ T VT L I+ LE LNL
Sbjct: 792 H---QLRVATLSNTRTNDENIRHVSECKSLNTLNLAFCKDITDVTALSKITMLEELNLDC 848
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C +I +G E L K ++ +E ++ + + L
Sbjct: 849 C--HNIRKGIETLGTLPK-----ARILSMKECYM------------GDGYAQQCSILGNS 889
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K+L L+L S G SV+ ++ V A L L L + R LP L +L+L
Sbjct: 890 KSLVKLNLERSR-GRISVKALSNV-ATLEELVLDHARKVCCIPSFSC--LPRLRVLNLKY 945
Query: 361 TQIDDYAISYMSMMPSLKFIDISN----TDIK-------GFIQQVGAETDLVLSLTALQN 409
T I+ +S SL+ +++S+ TDI V + +L
Sbjct: 946 TDINGDVTKNISESKSLRSLNLSHCKWVTDISVLSSLLTLEELNVNCCNGIRKGWESLGK 1005
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSL-HQLSSLSKLTNLSIR 467
L L L T+++ + LS+ K+L+ L R L+DV++ +++ SL +L S
Sbjct: 1006 LPLLRVAILSDTKITAKDIACLSSCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIVTSCS 1065
Query: 468 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIG 527
D + + LG+ R L ++ G + E + IEV EL+ I P I
Sbjct: 1066 DGLKGLNALGTLPRLRFHHLRNVRGSDISVESIGTSKSLVRLHIEVGEELTDITPLSNIT 1125
Query: 528 S 528
S
Sbjct: 1126 S 1126
>gi|87307769|ref|ZP_01089912.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
gi|87289383|gb|EAQ81274.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
Length = 1283
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 185/429 (43%), Gaps = 54/429 (12%)
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRC---------VKVTDAGMKHLLSISTLEKLW 146
++++C +VT+ LWA T +T L + C V D + HL L
Sbjct: 849 HLSECDKVTNLMLWA-TPITREDFLAFADCKLQGVLLSYTPVKDEWLTHLTHPEAFTDLG 907
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
S T + +G+A + + + L L +TD+ L +L+ + L + V++ G
Sbjct: 908 FSFTQIGDEGLAAFQNSKKIVNLHLEHTKITDVGLAYFHDCRELKSIRLRQTSVTDAGVL 967
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLN--LSNCTI----DSILEGNENK-----AP 255
K +L L+LA T VT +++E L L NC I D+ E E K A
Sbjct: 968 PFKHCSKLEELSLATTNVTA----AAVEELRAALPNCKITWDGDAKTESPEEKNSDNLAA 1023
Query: 256 LAKISLAGTTFINEREAFLYIETSL------LSFLD------VSNSSLSRFCFLTQMKAL 303
+S+ G +N ++ T L L+ ++ ++ L+ F + +L
Sbjct: 1024 KYVLSIGGIVRLNGGGTDIHSATELPPAPFRLTHVNFNLCKKATDDGLAVFANCKDIVSL 1083
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
+ + ++ G C +L+ LN + + + SAG+ +LA + NLE +SL G +
Sbjct: 1084 T-MRFTPNVTGRGLAYFKNC--KDLKELNCNYSPYVSAGLPLLA-NCKNLEKISLMGVKF 1139
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVLS----------LTALQNLN 411
+ ++ +P L F+++ T ++ AE+ L+ L A QN N
Sbjct: 1140 TREELRPIAELP-LTFVNLGATPVQDEWLSDFTNAESLTYLNFASTKIGDKGLAAFQNCN 1198
Query: 412 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 471
L++L+L+ T ++D L ++L L L+N + D L + S KL + I +
Sbjct: 1199 ALQQLSLQDTNITDEGLAYFYDCRDLEILQLQNTKVRDFGLLRFKSCQKLKQVEISKTRV 1258
Query: 472 TNSGLGSFK 480
T +G+ K
Sbjct: 1259 TAAGVDELK 1267
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
K+ D G+ + + L++L L +T +T +G+A ++L +L L V D L +
Sbjct: 1184 TKIGDKGLAAFQNCNALQQLSLQDTNITDEGLAYFYDCRDLEILQLQNTKVRDFGLLRFK 1243
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
KL+ +++ ++V+ G LK L + + W V
Sbjct: 1244 SCQKLKQVEISKTRVTAAGVDELKK--SLPYCTVVWDDV 1280
>gi|290982526|ref|XP_002673981.1| predicted protein [Naegleria gruberi]
gi|284087568|gb|EFC41237.1| predicted protein [Naegleria gruberi]
Length = 363
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 175/375 (46%), Gaps = 38/375 (10%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M L L++S +++ G K++ + L L +S + G +S ++ L+ L++
Sbjct: 1 MKQLTSLNVSNN-QISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFN 59
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNIS 231
++D + + + +L LD+ +Q+ GA + +L+ LN+++ ++ IS
Sbjct: 60 NRISDEGAKYISEMKQLISLDISYNQIGAEGAKFISEMKQLTSLNISYNEISDEGAKYIS 119
Query: 232 SLECLNLSNCTIDSILEGNENKAPLA-------------KISLAGTTFINEREAFLYIET 278
++ L N + + I EG P++ +IS G +I+E +
Sbjct: 120 EMKQLTSLNISYNDISEG---AKPISEMKQLTSLNVSNNQISGKGAKYISEMKQ------ 170
Query: 279 SLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
L+ L++S++ +S ++ +MK L LD+S++ I D+ + ++ + L +LN+SN
Sbjct: 171 --LTSLNISDNQISGKGAKYIGEMKQLTSLDISNNQISDEGAKFLSEM-KQLISLNVSNN 227
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQ 392
+ S ++ + L L++S QI D Y+S M L +DI N I +I
Sbjct: 228 QISGKEAKFMS-EMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNNLISDEGAKYIS 286
Query: 393 QVGAETDLVLSLTALQNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
++ T L +S + +++ +++ LN+ Q++D +S K+L L + +
Sbjct: 287 EMKHLTSLDISYNEISHISEMKQLTSLNISFNQINDEGAKSISEMKQLTSLDMSYNRIGG 346
Query: 450 VSLHQLSSLSKLTNL 464
+S + LT+L
Sbjct: 347 EGAKYISEMKHLTSL 361
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 145/320 (45%), Gaps = 40/320 (12%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLPNISSLECLNLSNC 241
+ +L L++ +Q+S +GA + +L+ LN++ G + + L LN+ N
Sbjct: 1 MKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFNN 60
Query: 242 TIDSILEG----NENKAPLA------KISLAGTTFINEREAFLYIETSL-LSFLDVSNSS 290
I EG +E K ++ +I G FI+E + TSL +S+ ++S+
Sbjct: 61 RISD--EGAKYISEMKQLISLDISYNQIGAEGAKFISEMKQL----TSLNISYNEISDEG 114
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 350
++++MK L L++S + I + + + L +LN+SN + S G ++ +
Sbjct: 115 AK---YISEMKQLTSLNISYNDISEGAKPISEM--KQLTSLNVSNNQISGKGAKYIS-EM 168
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
L L++S QI Y+ M L +DISN Q+ E LS +
Sbjct: 169 KQLTSLNISDNQISGKGAKYIGEMKQLTSLDISNN-------QISDEGAKFLS-----EM 216
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L LN+ Q+S +S K+L L++ N ++D +S + +LT+L I + +
Sbjct: 217 KQLISLNVSNNQISGKEAKFMSEMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNNL 276
Query: 471 LTNSGLGSFKPPRSLKLLDL 490
+++ G + L LD+
Sbjct: 277 ISDEGAKYISEMKHLTSLDI 296
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 146/313 (46%), Gaps = 26/313 (8%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN---- 218
++ L+ L++ ++ + + + +L L++ +++ +GA + +L+ LN
Sbjct: 1 MKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFNN 60
Query: 219 -LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE--REAFLY 275
++ G + + L L++S I + EG + + + +++ ++ NE E Y
Sbjct: 61 RISDEGAKYISEMKQLISLDISYNQIGA--EGAKFISEMKQLTSLNISY-NEISDEGAKY 117
Query: 276 I-ETSLLSFLDVSNSSLSRFCF-LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
I E L+ L++S + +S +++MK L L++S++ I + ++ + L +LN+
Sbjct: 118 ISEMKQLTSLNISYNDISEGAKPISEMKQLTSLNVSNNQISGKGAKYISEM-KQLTSLNI 176
Query: 334 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 393
S+ + S G + G + L L +S QI D ++S M L +++SN I G +
Sbjct: 177 SDNQISGKGAKYI-GEMKQLTSLDISNNQISDEGAKFLSEMKQLISLNVSNNQISGKEAK 235
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
+E + L LN+ Q+SD +S K+L L + N ++D
Sbjct: 236 FMSE------------MKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNNLISDEGAK 283
Query: 454 QLSSLSKLTNLSI 466
+S + LT+L I
Sbjct: 284 YISEMKHLTSLDI 296
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 130/288 (45%), Gaps = 44/288 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E Y+ + L SLN++ S ++ M L L++S +++ G K+
Sbjct: 108 NEISDEGAKYISEMKQLTSLNIS--YNDISEGAKPISEMKQLTSLNVSNN-QISGKGAKY 164
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S+ ++ G + ++ L+ LD+ ++D + L + +L L++
Sbjct: 165 ISEMKQLTSLNISDNQISGKGAKYIGEMKQLTSLDISNNQISDEGAKFLSEMKQLISLNV 224
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTG--------VTKLPNISSLECLNLSNCTIDSIL 247
+Q+S + A + +L+ LN++ ++++ ++SL+ N N
Sbjct: 225 SNNQISGKEAKFMSEMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFN--NL------ 276
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
IS G +I+E + L+ LD+S + +S +++MK L L+
Sbjct: 277 -----------ISDEGAKYISEMKH--------LTSLDISYNEISH---ISEMKQLTSLN 314
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNL 353
+S + I D+ + ++ + L +L++S R G ++ HL +L
Sbjct: 315 ISFNQINDEGAKSISEM-KQLTSLDMSYNRIGGEGAKYISEMKHLTSL 361
>gi|414586494|tpg|DAA37065.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 400
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 29/197 (14%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++A G++ L L L L+L
Sbjct: 230 KGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----- 226
G VT + L + L L L+L + + G LK +L L+L + +T
Sbjct: 290 EGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIH 349
Query: 227 LPNISSLECLNLSNCTI 243
L ++ +LECLNL +C I
Sbjct: 350 LKDLVNLECLNLDSCKI 366
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 108/263 (41%), Gaps = 29/263 (11%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
++SL C +++ L L+G + L L + +C VT G K ++ L L L
Sbjct: 161 MQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 152 LTADG-IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
G I L + + +TD ++ L LT L L L ++S G + L+
Sbjct: 221 KINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRG 280
Query: 211 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
+L LNL VT + ++SL LNLS C I EG EN L K+
Sbjct: 281 LHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKLKALSLG 338
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
F +A L L + LE L+L S IGD+ + + +
Sbjct: 339 FNQITDACLI--------------------HLKDLVNLECLNLDSCKIGDEGLFHLKGL- 377
Query: 326 ANLRNLNLSNTRFSSAGVGILAG 348
L+NL LS+T S G+ L+G
Sbjct: 378 IQLKNLELSDTEVGSNGLRHLSG 400
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + M YL LR L ++ C ++++ + L G+ L L+L C VT ++
Sbjct: 244 NGITDSDMKYLSDLTNLRELQLSSC-KISAFGVSYLRGLHKLGHLNLEGCA-VTAVCLEV 301
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ +++L L LS G+ +G L L L L LG +TD L L+ L LE L+L
Sbjct: 302 ISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNL 361
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
++ + G LK +L L L+ T V
Sbjct: 362 DSCKIGDEGLFHLKGLIQLKNLELSDTEV 390
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE-TDLVL------ 402
L NL L LS +I + +SY+ + L +++ + +V +E LVL
Sbjct: 257 LTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRC 316
Query: 403 -----SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 457
L+ L L+ L+L Q++DA L L L L+L + + D L L
Sbjct: 317 GICDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKIGDEGLFHLKG 376
Query: 458 LSKLTNLSIRDAVLTNSGL 476
L +L NL + D + ++GL
Sbjct: 377 LIQLKNLELSDTEVGSNGL 395
>gi|290993170|ref|XP_002679206.1| leucine rich repeat protein [Naegleria gruberi]
gi|284092822|gb|EFC46462.1| leucine rich repeat protein [Naegleria gruberi]
Length = 527
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 182/420 (43%), Gaps = 56/420 (13%)
Query: 8 ELVRLCIEAACQSGESVQKWRRQRRSLERLPAH---LADSLLRHLIRRRLIFPSLLEVFK 64
+L RL I+A+ E V ++ + + L L H ++D +++L R L + L +F
Sbjct: 122 QLTRLTIDASHIRDEGV-RYISELKQLAYLSVHSNDISDDGVKYL--RELKQLTTLIIFS 178
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL--TGMTCLKELD- 121
N V +E + + L SL + D A + G C+ EL
Sbjct: 179 -----------NRVGSEGCKCISELKQLTSLCIDDNHINDEGANNRVGSEGCKCISELKQ 227
Query: 122 -LSRCVK---VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVT 177
S C+ + D G K+L ++ L L +S GL +G +S+L L L++ +
Sbjct: 228 LTSLCIDDNHINDEGAKYLSELAQLTYLDISSNGLGNEGTKYISTLNQLEKLNISQNYIG 287
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN 237
D L L++L L+L +++ GA L +L+ L++ + + + E
Sbjct: 288 DEGLEYFGKLSQLTSLELSNNKIGTEGAKYLSELKQLTQLDIEYNKIGDKGAMYFGELKQ 347
Query: 238 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FC 295
L N I++ GN+ G +I E + +Y LD+S + +
Sbjct: 348 LVNLIINNNRIGND-----------GVKYIGELKQLIY--------LDISENRIGNEGIK 388
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
++ ++K L +++S + IG++ + + + + L +L LSN + G ++ L L
Sbjct: 389 YIGELKQLTDVNISENRIGNEGAKYIGQL-SQLTSLYLSNNNIGNEGAKYIS-ELKELIY 446
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L ++ +I + Y+S M + +DI N +I + G + ++ ++ L HLE+
Sbjct: 447 LYMNNNKIRNEGAKYISEMKQVTQLDIGNN----YIGEEG-----IKYISEMKQLIHLEK 497
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 102/493 (20%), Positives = 204/493 (41%), Gaps = 80/493 (16%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E M++L F+++ V +C V S W ++ L+L+ C + + G +
Sbjct: 24 NDIIYEIMSFLDDFKFI----VMNCALV--SKQWFNVILSTCNHLNLN-CKRGVEMGGQF 76
Query: 136 LLSISTLE--------KLWLSETGLTA-------DGIA-LLSSLQNLSVLDLGGLPVTDL 179
L +I+ L+ K +S LT +G A +S L+ L+ L + + D
Sbjct: 77 LQNIAILDVCATNDTCKKLISMKSLTELIIKCDDEGSAKFISELKQLTRLTIDASHIRDE 136
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLE 234
+R + L +L YL + + +S+ G L+ +L+ L + G + + L
Sbjct: 137 GVRYISELKQLAYLSVHSNDISDDGVKYLRELKQLTTLIIFSNRVGSEGCKCISELKQLT 196
Query: 235 CLNLSNCTIDSILEGNENK---------APLAKIS--LAGTTFINEREAFLYIETSLLSF 283
L + + I+ EG N+ + L +++ IN+ A E + L++
Sbjct: 197 SLCIDDNHIND--EGANNRVGSEGCKCISELKQLTSLCIDDNHINDEGAKYLSELAQLTY 254
Query: 284 LDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
LD+S++ L +++ + LE L++S + IGD+ +E + + L +L LSN + +
Sbjct: 255 LDISSNGLGNEGTKYISTLNQLEKLNISQNYIGDEGLEYFGKL-SQLTSLELSNNKIGTE 313
Query: 342 GVGILA-----------------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLK 378
G L+ G L L L ++ +I + + Y+ + L
Sbjct: 314 GAKYLSELKQLTQLDIEYNKIGDKGAMYFGELKQLVNLIINNNRIGNDGVKYIGELKQLI 373
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
++DIS ++G E + + L L +N+ + ++ + + +L
Sbjct: 374 YLDISEN-------RIGNE-----GIKYIGELKQLTDVNISENRIGNEGAKYIGQLSQLT 421
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
L L N ++ + +S L +L L + + + N G + + LD+ G + E
Sbjct: 422 SLYLSNNNIGNEGAKYISELKELIYLYMNNNKIRNEGAKYISEMKQVTQLDI-GNNYIGE 480
Query: 499 DAILQFCKMHPRI 511
+ I +M I
Sbjct: 481 EGIKYISEMKQLI 493
>gi|406831735|ref|ZP_11091329.1| hypothetical protein SpalD1_08854 [Schlesneria paludicola DSM
18645]
Length = 422
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 57/345 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ + + LG ++LR L V D R +T L L + L EL +S VTD G+K
Sbjct: 88 ITEDGLRELGQLKFLRRL-VVDGRSITDEGLMELVDLRSLTELTIS-ATSVTDEGLKQFQ 145
Query: 138 S-------ISTLE--------------------KLWLSETGLTADG-IALLSSLQNLSVL 169
S +S LE ++ L DG I L SL++L L
Sbjct: 146 SFLPQLRILSDLESVRRLAGFGGEIERSDGRVIRISLHNKPQFGDGDIESLMSLRHLESL 205
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
DLGG +TD L ++ L KL L L +++++RG L+ +LS L+L+ T
Sbjct: 206 DLGGTSITDGALLTVGRLQKLIQLQLPSTRITDRGLKALRNLKQLSILDLSRT------- 258
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+ + +D I K PL + L T + + + + FL +
Sbjct: 259 -------RIGDVGLDEI-----KKLPLTSLMLHDTQ-VTDFGLLALQDLKEVQFLGLYKC 305
Query: 290 SLSRFCFLT--QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
+++ +T + + L L L+S+ I D + V + LR L L +++ + AG+ L
Sbjct: 306 AITDTGLVTLGRFQNLSELCLNSTRITDGGLRNVGQL-RKLRILQLGDSQITDAGLLELR 364
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
HL NL L L GT++ D +++ + +L ID+ T GF +
Sbjct: 365 -HLNNLVGLVLRGTRVTDDSVNTLKRYQNLVHIDLRQT---GFTE 405
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 150/347 (43%), Gaps = 37/347 (10%)
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
LL SL NL+ LD+ + +T+ LR L L L L + G +++ G L L+ L
Sbjct: 71 LLKSLPNLTSLDVSAIVITEDGLRELGQLKFLRRLVVDGRSITDEGLMELVDLRSLTELT 130
Query: 219 LAWTGVTK--LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
++ T VT L S L I S LE LAG ER I
Sbjct: 131 ISATSVTDEGLKQFQSF----LPQLRILSDLESVRR--------LAGFGGEIERSDGRVI 178
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
SL + + + L ++ LE LDL + I D ++ V + L L L +T
Sbjct: 179 RISLHNKPQFGDGDIES---LMSLRHLESLDLGGTSITDGALLTVGRL-QKLIQLQLPST 234
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNTDIKGFIQQV 394
R + G+ L +L L IL LS T+I D + + +P SL D TD
Sbjct: 235 RITDRGLKALR-NLKQLSILDLSRTRIGDVGLDEIKKLPLTSLMLHDTQVTD-------- 285
Query: 395 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 454
L ALQ+L ++ L L + ++D L L F+ L L L + +TD L
Sbjct: 286 -------FGLLALQDLKEVQFLGLYKCAITDTGLVTLGRFQNLSELCLNSTRITDGGLRN 338
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
+ L KL L + D+ +T++GL + +L L L G +T+D++
Sbjct: 339 VGQLRKLRILQLGDSQITDAGLLELRHLNNLVGLVLRGTR-VTDDSV 384
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+T + L L L EL L+ ++TD G++++ + L L L ++ +T G+ L
Sbjct: 307 ITDTGLVTLGRFQNLSELCLN-STRITDGGLRNVGQLRKLRILQLGDSQITDAGLLELRH 365
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L NL L L G VTD + +L+ L ++DL + + G LK
Sbjct: 366 LNNLVGLVLRGTRVTDDSVNTLKRYQNLVHIDLRQTGFTEAGVTELK 412
>gi|149174696|ref|ZP_01853321.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
gi|148846390|gb|EDL60728.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
Length = 460
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 26/370 (7%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
LDL + DA +KHL + +LE+L L T + L L L + D
Sbjct: 98 LDL-KGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGKKNKLWFLSLESTAIGDE 156
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSL 233
+++L L L+ L L + ++N V+ FP L L+L + G+ + + +L
Sbjct: 157 GVKNLSDLQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNL 216
Query: 234 ECLNLSNCTIDSILEGNENKAPLAKISLAGT--TFINEREAFLYIETSLLSF-LDVSNSS 290
+ L + + EG ++ A L + T I++ L + +L+S LD + S
Sbjct: 217 KVLKVQATQVTD--EGMKDIAALPNLQRLNTWGRNISDETLELLKDKNLVSLELDDTEIS 274
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 350
+L M +E L L +G+ +E + + L+ L+L +T + G+ L+G L
Sbjct: 275 DEGMKYLKDMTNMESLHLRRDFVGNPGIENIQNM-KKLQTLHLRDTVVTDEGMKYLSG-L 332
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
+L L L + I D + + + L + + T+ TD L +
Sbjct: 333 TDLTYLDLDESMIGDQGLEQIKDLKKLTRLGLWGTET----------TDQ--GLKVISGF 380
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L RLNLE T ++DA L L K+L +L+L ++D L L++L L L +
Sbjct: 381 TELNRLNLEGTPITDAGLKQLLPLKKLEYLNLSKTEISDEGLKTLAALKNLKELQLSFTQ 440
Query: 471 LTNSGLGSFK 480
+T+ G+ F+
Sbjct: 441 VTDDGVKQFE 450
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
G++ DG L +LDL G D L+ L L LE L LWG ++ +
Sbjct: 88 GMSDDGRVL--------ILDLKGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGK 139
Query: 211 FPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 268
+L FL+L T G + N+S L+ L + +SL T N
Sbjct: 140 KNKLWFLSLESTAIGDEGVKNLSDLQGLQV--------------------LSLRATNITN 179
Query: 269 ER----EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+ AF ++ L F N + MK L+ L + ++ + D+ ++ +A +
Sbjct: 180 DALKVVAAFPELKDLDLRFNKEINDE--GMPHIKGMKNLKVLKVQATQVTDEGMKDIAAL 237
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL+ LN S + +L NL L L T+I D + Y+ M +++ + +
Sbjct: 238 -PNLQRLNTWGRNISDETLELLKDK--NLVSLELDDTEISDEGMKYLKDMTNMESLHLR- 293
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
+ F+ G E +QN+ L+ L+L T V+D + LS +L +L L
Sbjct: 294 ---RDFVGNPGIEN--------IQNMKKLQTLHLRDTVVTDEGMKYLSGLTDLTYLDLDE 342
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+ + D L Q+ L KLT L + T+ GL L L+L G
Sbjct: 343 SMIGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRLNLEG 390
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 147/341 (43%), Gaps = 68/341 (19%)
Query: 92 LRSLNVADCR--RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L+ L V R +T+ AL + LK+LDL ++ D GM H+ + L+ L +
Sbjct: 164 LQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNLKVLKVQA 223
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
T +T +G+ +++L NL L+ G ++D L L+ L L+L +++S+ G LK
Sbjct: 224 TQVTDEGMKDIAALPNLQRLNTWGRNISDETLELLKD-KNLVSLELDDTEISDEGMKYLK 282
Query: 210 MFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 264
+ L+L G+ + N+ L+ L+L + + EG
Sbjct: 283 DMTNMESLHLRRDFVGNPGIENIQNMKKLQTLHLRDTVVTD--EG--------------- 325
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+L+ + L +LDL SMIGD +E + +
Sbjct: 326 -----------------------------MKYLSGLTDLTYLDLDESMIGDQGLEQIKDL 356
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
L L L T + G+ +++G L L+L GT I D + + + L+++++S
Sbjct: 357 -KKLTRLGLWGTETTDQGLKVISG-FTELNRLNLEGTPITDAGLKQLLPLKKLEYLNLSK 414
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
T+ I G +T L AL+NL L+ L TQV+D
Sbjct: 415 TE----ISDEGLKT-----LAALKNLKELQ---LSFTQVTD 443
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E++ LR + V + + + L++L++ D VT + L+G+T L LDL
Sbjct: 286 NMESLHLR-RDFVGNPGIENIQNMKKLQTLHLRDTV-VTDEGMKYLSGLTDLTYLDLDES 343
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+ + D G++ + + L +L L T T G+ ++S L+ L+L G P+TD L+ L
Sbjct: 344 M-IGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRLNLEGTPITDAGLKQLL 402
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L KLEYL+L +++S+ G L L L L++T VT
Sbjct: 403 PLKKLEYLNLSKTEISDEGLKTLAALKNLKELQLSFTQVT 442
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 44/274 (16%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDL-SRCV-- 126
++LR ++ E M ++ + L+ L V +VT + + + L+ L+ R +
Sbjct: 194 LDLRFNKEINDEGMPHIKGMKNLKVLKVQ-ATQVTDEGMKDIAALPNLQRLNTWGRNISD 252
Query: 127 -------------------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
+++D GMK+L ++ +E L L + GI + +++ L
Sbjct: 253 ETLELLKDKNLVSLELDDTEISDEGMKYLKDMTNMESLHLRRDFVGNPGIENIQNMKKLQ 312
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK- 226
L L VTD ++ L LT L YLDL S + ++G +K +L+ L L T T
Sbjct: 313 TLHLRDTVVTDEGMKYLSGLTDLTYLDLDESMIGDQGLEQIKDLKKLTRLGLWGTETTDQ 372
Query: 227 -LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 285
L IS LN N LEG I+ AG + + Y+ LS +
Sbjct: 373 GLKVISGFTELNRLN------LEG-------TPITDAGLKQLLPLKKLEYLN---LSKTE 416
Query: 286 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
+S+ L L K L+ L LS + + DD V+
Sbjct: 417 ISDEGLKTLAAL---KNLKELQLSFTQVTDDGVK 447
>gi|290997674|ref|XP_002681406.1| predicted protein [Naegleria gruberi]
gi|284095030|gb|EFC48662.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 179/433 (41%), Gaps = 65/433 (15%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
GEN + A ++ + L SL++ R+ + ++ M L LD+ ++ D G
Sbjct: 10 GENQIGAVGAKFISEMKQLTSLDII-YNRIGAVGAKLISKMKQLTSLDIGGN-QIGDEGA 67
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L + + A G +S ++ L+ LD+ + D ++S+ + +L L
Sbjct: 68 KFISEMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYNEIGDEGVKSICEMKQLTSL 127
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNCTIDSILE 248
++ +++ + G + +L+ L++ G + + L L++ N
Sbjct: 128 SIYNNRIGDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLTSLSIYN-------- 179
Query: 249 GNENKAPLAK-----------------ISLAGTTFINEREAF----------------LY 275
N+ A AK I + G FI+E + L
Sbjct: 180 -NQTGAVGAKFISEMKQLTSLDISVNEIGVEGAKFISEMKQLTSLNICYNRIGAEGVKLI 238
Query: 276 IETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
E L+ LD+ + + F+++MK L L++ + IGD+ + ++ + L +L
Sbjct: 239 SEMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNICENQIGDEGAKSISEM-KQLTSLGA 297
Query: 334 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 393
N G +++ + L L++S QI D +S M L +DI + +
Sbjct: 298 YNNEIGVEGTKLIS-EMKQLTSLNISKNQIGDEGAKLISEMKQLASLDI-------YYNE 349
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
+G E + + + L+ LN+ + Q+ D +S K+L L + + D +
Sbjct: 350 IGDE-----GVKLISEMKQLKSLNISKNQIGDEGAKLISEMKQLTSLDIHFNEIGDEGVK 404
Query: 454 QLSSLSKLTNLSI 466
+S + +LT+LSI
Sbjct: 405 LISEMKQLTSLSI 417
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 173/402 (43%), Gaps = 32/402 (7%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M LK LD+ ++ G K + + L L + + A G L+S ++ L+ LD+GG
Sbjct: 1 MKQLKSLDIGEN-QIGAVGAKFISEMKQLTSLDIIYNRIGAVGAKLISKMKQLTSLDIGG 59
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 228
+ D + + + +L L ++ + + G + +L+ L++ + GV +
Sbjct: 60 NQIGDEGAKFISEMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYNEIGDEGVKSIC 119
Query: 229 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE-----REAFLYIETSLLSF 283
+ L L++ N I G+E ++++ + IN + A E L+
Sbjct: 120 EMKQLTSLSIYNNRI-----GDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLTS 174
Query: 284 LDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
L + N+ F+++MK L LD+S + IG + + ++ + L +LN+ R +
Sbjct: 175 LSIYNNQTGAVGAKFISEMKQLTSLDISVNEIGVEGAKFISEM-KQLTSLNICYNRIGAE 233
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
GV +++ + L L + G +I D ++S M L ++I I + +E +
Sbjct: 234 GVKLIS-EMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNICENQIGDEGAKSISEMKQL 292
Query: 402 LSLTALQN------------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
SL A N + L LN+ + Q+ D +S K+L L + + D
Sbjct: 293 TSLGAYNNEIGVEGTKLISEMKQLTSLNISKNQIGDEGAKLISEMKQLASLDIYYNEIGD 352
Query: 450 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+ +S + +L +L+I + + G + L LD+H
Sbjct: 353 EGVKLISEMKQLKSLNISKNQIGDEGAKLISEMKQLTSLDIH 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 140/315 (44%), Gaps = 49/315 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + + + L SL++ + + A + ++ M L LD+S ++ G K
Sbjct: 156 NRIGVQGAKSICEMKQLTSLSIYNNQTGAVGAKF-ISEMKQLTSLDIS-VNEIGVEGAKF 213
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + + A+G+ L+S ++ L+ LD+GG + D + + + +L L++
Sbjct: 214 ISEMKQLTSLNICYNRIGAEGVKLISEMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNI 273
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
+Q+ + GA ++++ ++SL N NE
Sbjct: 274 CENQIGDEGAK----------------SISEMKQLTSLGAYN------------NE---- 301
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMI 313
I + GT I+E + L+ L++S + + +++MK L LD+ + I
Sbjct: 302 ---IGVEGTKLISEMKQ--------LTSLNISKNQIGDEGAKLISEMKQLASLDIYYNEI 350
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
GD+ V++++ + L++LN+S + G +++ + L L + +I D + +S
Sbjct: 351 GDEGVKLISEM-KQLKSLNISKNQIGDEGAKLIS-EMKQLTSLDIHFNEIGDEGVKLISE 408
Query: 374 MPSLKFIDISNTDIK 388
M L + I N +K
Sbjct: 409 MKQLTSLSIYNQKMK 423
>gi|298709085|emb|CBJ31033.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 573
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 209/511 (40%), Gaps = 92/511 (18%)
Query: 10 VRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEA 69
+ LC+ + C+ + +K+ LP + D+LL L + R + L F+
Sbjct: 1 MELCVRSICRRMGNFRKFP------SYLPREVVDALLGSLTQHRALSSYALRAFR----- 49
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT----CLKELDLSRC 125
D E + SL + +CR V + + L T C+ LDLS C
Sbjct: 50 ---------DCE----------VTSLALGECRGVRNGWVRELLQATPCGRCIVTLDLSSC 90
Query: 126 VKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPV-TDLVLRS 183
+TD G+ L ++ +LE L +GL + LS+ L L L P+ D + +
Sbjct: 91 TGLTDTGLSDLPALKSLESASLRRCSGLGTEATLCLSNSPGLETLSLAHCPLLDDAAVGN 150
Query: 184 LQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC- 241
L L++L L+L G + +S+ G L LA +LP SL CLN S C
Sbjct: 151 LAGLSRLRSLELEGCENISDEG------------LRLAC----RLP---SLTCLNASRCH 191
Query: 242 --TIDSILEGNENKAPLAKISL---AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC- 295
T+D + + L +++L AG + E S +
Sbjct: 192 GLTVDGLAGLEQAAGGLKRLNLGWCAGLVRGSAAAGGRGGEESDDEDDEDDEDGGGDSDD 251
Query: 296 ---------------FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFS 339
L + LE + L+ S IG++ + ++ LR+L+L R +
Sbjct: 252 EGLGGGRRRRRRGRWVLPVLPKLERVCLARSGIGNEGLSRLSAGSPLLRDLDLCGCVRLT 311
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+G L+ L +LE L LS ++ +P L +++ ++ +T
Sbjct: 312 ESGAHTLSA-LQDLETLDLSNCRVYSCVEELAQKLPGLTALNLDRCNV--------GDT- 361
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+ AL +L LERLNL T ++DA + L+ L L+L +TD L L++LS
Sbjct: 362 ---GVRALSSLTKLERLNLADTSITDAGMTHLAPLTRLRDLNLFFCHITDAGLGPLAALS 418
Query: 460 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L L++ + ++G+ R L+ LD+
Sbjct: 419 NLVRLNLDTRDVGDAGMVQLTRLRLLESLDV 449
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 16/276 (5%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L++LDL CV++T++G L ++ LE L LS + + L L L+ L+L V
Sbjct: 299 LRDLDLCGCVRLTESGAHTLSALQDLETLDLSNCRVYSCVEELAQKLPGLTALNLDRCNV 358
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLE 234
D +R+L LTKLE L+L + +++ G L RL LNL + +T L +++L
Sbjct: 359 GDTGVRALSSLTKLERLNLADTSITDAGMTHLAPLTRLRDLNLFFCHITDAGLGPLAALS 418
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLA------GTTFINEREAFLYIETSLLSFLDVSN 288
NL +D+ G+ L ++ L + + A L+ L+V +
Sbjct: 419 --NLVRLNLDTRDVGDAGMVQLTRLRLLESLDVFSASITDFGVAHGLCRLPCLTTLEVCS 476
Query: 289 SSLSR--FCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
L+ L+++K+L L++S + I V V + LR+LNLS+ + + +
Sbjct: 477 GRLTDRGLYHLSRVKSLTRLNVSQNFGITAAGVRHVGTL-TRLRSLNLSSCNITPSSLNS 535
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYM-SMMPSLKFI 380
L G L NLE LS+ G +++ + + +P+L+ +
Sbjct: 536 LTG-LVNLESLSVFGCRLEMTDLELLREKLPNLRVV 570
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 276 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
+E L+ + N LSR + + L LDL + +S +L L+LSN
Sbjct: 274 LERVCLARSGIGNEGLSRLSAGSPL--LRDLDLCGCVRLTESGAHTLSALQDLETLDLSN 331
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
R S V LA LP L L+L + D + +S + L+ +++++T I
Sbjct: 332 CRVYSC-VEELAQKLPGLTALNLDRCNVGDTGVRALSSLTKLERLNLADTSI-------- 382
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
TD +T L L L LNL ++DA L PL+ L+ L+L + D + QL
Sbjct: 383 --TDA--GMTHLAPLTRLRDLNLFFCHITDAGLGPLAALSNLVRLNLDTRDVGDAGMVQL 438
Query: 456 SSLSKLTNLSIRDAVLTNSGL 476
+ L L +L + A +T+ G+
Sbjct: 439 TRLRLLESLDVFSASITDFGV 459
>gi|46447466|ref|YP_008831.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401107|emb|CAF24556.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 456
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L+ F + EA+ + + L + L+ L++ +C T + L LT +T
Sbjct: 214 FEEILKYFSNEIEALNFSNNADLTDAHLLALKNCKNLKVLDLQECWNFTDAGLAHLTPLT 273
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL- 174
L+ LDL+ C +VTD G+ HL + L+ L L LT G+ L L L LDL
Sbjct: 274 ALQHLDLTGCFRVTDTGLAHLSPLVALQHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCW 333
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNL--AW----TGVTKL 227
+TD L L+ L L++L+L + +++ G A L L L+L W G+ +L
Sbjct: 334 NLTDAGLAHLRPLVALQHLNLTNCENITDVGLAHLTPLVALKHLDLMQCWKLTGNGLARL 393
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
++ +L+ LNLS C+ ++ AG + A +++ L + +++
Sbjct: 394 RSLVALQHLNLSGCSY---------------LTDAGLAHLRPLVALQHLD--LANCYELT 436
Query: 288 NSSLSRFCFLTQMKALEHLDL 308
++ L+ F FL A HLDL
Sbjct: 437 DAGLAHFKFLA---ATTHLDL 454
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 404 LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 461
L AL+N +L+ L+L++ +DA L L+ L HL L +TD L LS L L
Sbjct: 241 LLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGCFRVTDTGLAHLSPLVAL 300
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
+L++ LT++GL KP +LK LDL W LT+ + + P + + H
Sbjct: 301 QHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWNLTDAGL---AHLRPLVALQH 351
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 21/250 (8%)
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQM--KALEHLDLSSSMIGDDSVEMVACVGANLRNLN 332
Y+E +++S L +S L+ F + + +E L+ S++ D+ + NL+ L+
Sbjct: 195 YLELNVVSALLNQSSQLTEFEEILKYFSNEIEALNFSNNADLTDAHLLALKNCKNLKVLD 254
Query: 333 LSNT-RFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKG- 389
L F+ AG+ L L L+ L L+G ++ D ++++S + +L+ +++ D+
Sbjct: 255 LQECWNFTDAGLAHLTP-LTALQHLDLTGCFRVTDTGLAHLSPLVALQHLNLIGCDLTDA 313
Query: 390 ---FIQQVGAETDLVL---------SLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKE 436
++ + A L L L L+ L L+ LNL + ++D L L+
Sbjct: 314 GLVHLKPLIALKHLDLMRCWNLTDAGLAHLRPLVALQHLNLTNCENITDVGLAHLTPLVA 373
Query: 437 LIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGW 494
L HL L LT L +L SL L +L++ + LT++GL +P +L+ LDL +
Sbjct: 374 LKHLDLMQCWKLTGNGLARLRSLVALQHLNLSGCSYLTDAGLAHLRPLVALQHLDLANCY 433
Query: 495 LLTEDAILQF 504
LT+ + F
Sbjct: 434 ELTDAGLAHF 443
>gi|59802561|gb|AAX07517.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 402
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 6/141 (4%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
T ++L L G+T L EL+LS KVTDAG++ L ++ L L L T +T G+ L
Sbjct: 226 TTDASLAELKGLTNLTELNLSDT-KVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKG 284
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L NL+VLDL G VTD L+ L L+KL LDL ++V+ G L L+ L+L T
Sbjct: 285 LSNLAVLDLFGTSVTDAGLKELGRLSKLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLT 344
Query: 223 GVT-----KLPNISSLECLNL 238
VT +L +++L L+L
Sbjct: 345 AVTDAGLKELSGLANLTSLDL 365
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 142/321 (44%), Gaps = 55/321 (17%)
Query: 156 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
G+ + SL L+VLDLG VTD L+ L+ LT L +V++ G L L+
Sbjct: 134 GLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTWISAPHEVTDAGLKELSGLANLT 193
Query: 216 FLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 275
LNL +T VT L E L+N T + L GT+
Sbjct: 194 ELNLRFTKVTYL---GLKELKGLTNLT---------------SLDLFGTS---------- 225
Query: 276 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
+++SL+ LT L L+LS + + D ++ + + ANL +L+L
Sbjct: 226 ----------TTDASLAELKGLTN---LTELNLSDTKVTDAGLQELTGL-ANLASLDLRF 271
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
T+ + AG+ L G L NL +L L GT + D + + + L +D+ +T + G
Sbjct: 272 TKVTDAGLQKLKG-LSNLAVLDLFGTSVTDAGLKELGRLSKLTVLDLGSTKVTGT----- 325
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
L L L +L L+L T V+DA L LS L L L ++D L +L
Sbjct: 326 -------GLKELTGLANLTSLHLRLTAVTDAGLKELSGLANLTSLDLFGTPVSDTDLKEL 378
Query: 456 SSLSKLTNLSIRDAVLTNSGL 476
LSKLT+L + +T+ G+
Sbjct: 379 KKLSKLTSLRLGRTAVTDVGI 399
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 126/280 (45%), Gaps = 48/280 (17%)
Query: 89 FRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
R L L V D R VT + L L G+T L +S +VTDAG+K L ++ L +L
Sbjct: 138 MRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTW-ISAPHEVTDAGLKELSGLANLTELN 196
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L T +T G+ L L NL+ LDL G TD L L+ LT L L+L ++V++ G
Sbjct: 197 LRFTKVTYLGLKELKGLTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDTKVTDAGLQ 256
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSNCTIDSILEGNENKAPLAKISLAGTT 265
L L+ L+L +T VT + L+ L LSN LA + L GT
Sbjct: 257 ELTGLANLASLDLRFTKVTD----AGLQKLKGLSN---------------LAVLDLFGT- 296
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S D L R LT LDL S+ + ++ + +
Sbjct: 297 ----------------SVTDAGLKELGRLSKLTV------LDLGSTKVTGTGLKELTGL- 333
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
ANL +L+L T + AG+ L+G L NL L L GT + D
Sbjct: 334 ANLTSLHLRLTAVTDAGLKELSG-LANLTSLDLFGTPVSD 372
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 88/186 (47%), Gaps = 27/186 (14%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +++L G ++ DA +A L L LN++D + VT + L LTG+ L LDL R
Sbjct: 215 NLTSLDLFGTSTTDAS-LAELKGLTNLTELNLSDTK-VTDAGLQELTGLANLASLDL-RF 271
Query: 126 VKVTDAGM------------------------KHLLSISTLEKLWLSETGLTADGIALLS 161
KVTDAG+ K L +S L L L T +T G+ L+
Sbjct: 272 TKVTDAGLQKLKGLSNLAVLDLFGTSVTDAGLKELGRLSKLTVLDLGSTKVTGTGLKELT 331
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L NL+ L L VTD L+ L L L LDL+G+ VS+ LK +L+ L L
Sbjct: 332 GLANLTSLHLRLTAVTDAGLKELSGLANLTSLDLFGTPVSDTDLKELKKLSKLTSLRLGR 391
Query: 222 TGVTKL 227
T VT +
Sbjct: 392 TAVTDV 397
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
ANL LNL T+ + G+ L G L NL L L GT D +++ + + +L +++S+T
Sbjct: 190 ANLTELNLRFTKVTYLGLKELKG-LTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDT 248
Query: 386 DI--KGFIQQVG----AETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLST 433
+ G + G A DL + L L+ L++L L+L T V+DA L L
Sbjct: 249 KVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFGTSVTDAGLKELGR 308
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+L L L + +T L +L+ L+ LT+L +R +T++GL +L LDL G
Sbjct: 309 LSKLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLTAVTDAGLKELSGLANLTSLDLFG 367
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L+L T+ + AG+ L G L NL + ++ D + +S + +L +++ T +
Sbjct: 147 LDLGRTKVTDAGLQELRG-LTNLTTWISAPHEVTDAGLKELSGLANLTELNLRFTKVT-- 203
Query: 391 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
L L L+ L +L L+L T +DA+L L L L+L + +TD
Sbjct: 204 ----------YLGLKELKGLTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDTKVTDA 253
Query: 451 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L +L+ L+ L +L +R +T++GL K +L +LDL G
Sbjct: 254 GLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFG 295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L F V++ L L+++ L DL + + D ++ + + NL + +
Sbjct: 125 LRFTKVTDLGLKEMRSLSKLTVL---DLGRTKVTDAGLQELRGL-TNLTTWISAPHEVTD 180
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
AG+ L+G L NL L+L T++ + + + +L +D+ T + TD
Sbjct: 181 AGLKELSG-LANLTELNLRFTKVTYLGLKELKGLTNLTSLDLFGT----------STTDA 229
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
SL L+ L +L LNL T+V+DA L L+ L L LR +TD L +L LS
Sbjct: 230 --SLAELKGLTNLTELNLSDTKVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSN 287
Query: 461 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L L + +T++GL L +LDL
Sbjct: 288 LAVLDLFGTSVTDAGLKELGRLSKLTVLDL 317
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L +++L+ L L+L +T+V+DA L L L +TD L +LS L+ L
Sbjct: 133 LGLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTWISAPHEVTDAGLKELSGLANL 192
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
T L++R +T GL K +L LDL G
Sbjct: 193 TELNLRFTKVTYLGLKELKGLTNLTSLDLFG 223
>gi|343416403|emb|CCD20380.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 1256
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 201/470 (42%), Gaps = 57/470 (12%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
E SVD ++ L LR L++ C R+T + L M L+ LDL+ C + G+
Sbjct: 379 AEVSVDDAFLRDLTCHERLRELSLNSCTRITD--VSPLARMRSLEMLDLNGCTGIV-RGL 435
Query: 134 KHLLSISTLEKLWLSETGLT-----------------------ADGIALLSSLQNLSVLD 170
L ++TL++L+L + + ++ L+ +++L +LD
Sbjct: 436 HELCGLTTLQELYLRQMSVDDALLRDLTCHERLRELSLNSCTRITDVSPLARMRSLEMLD 495
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTK 226
L G L L LT L+ L L V + L RL L+L T V+
Sbjct: 496 LNGCTGIVRGLHELCGLTTLQELYLRQMSVDDALLRDLTCHERLRELSLNSCTRITDVSP 555
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
L + SLE LNL++CT I+ G L + +N +AFL T ++
Sbjct: 556 LARMRSLEILNLNDCT--GIVRGLHVLCGLTTLQKLCLANVNVDDAFLRDLTCHERLREL 613
Query: 287 SNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
S +S +R L +M++LE+LDL+ G V C L+ L L A +
Sbjct: 614 SLNSCTRITDVSPLARMRSLENLDLNDC-TGIVRGLHVLCGLTTLQELCLRQLSVDDAFL 672
Query: 344 GILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
L H L LSL S T+I D +S ++ M SL+ +D++ T +V
Sbjct: 673 RDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEILDLNGC------------TGIVR 717
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKL 461
L L L L+ L L V DA + L+ + L LSL + + +TDVS L+ + L
Sbjct: 718 GLHVLCGLTTLQELCLANVNVDDAFVRDLTCHERLRRLSLNSCTRITDVS--PLARMRSL 775
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 511
L++ D GL +L+ +L+ + +DA L+ H R+
Sbjct: 776 EMLNLNDCTGIVRGLHELCGLTTLQ--ELYLPKVYVDDAFLRDLTCHERL 823
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 189/444 (42%), Gaps = 52/444 (11%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L LN+ DC + L L G+T L+EL L + V V DA ++ L L +L
Sbjct: 769 LARMRSLEMLNLNDCTGIVR-GLHELCGLTTLQELYLPK-VYVDDAFLRDLTCHERLRRL 826
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L+ D ++ L+ +++L +L+L G L L LT L+ L L V +
Sbjct: 827 SLNSCTRITD-VSPLARMRSLEMLNLNGCTGIVRGLHELCGLTTLQELYLRQMSVDDAFL 885
Query: 206 AVLKMFPRLSFLNL----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL 261
L RL L+L T V+ L + SLE L+L++CT I+ G L +
Sbjct: 886 RDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNDCT--GIVRGLHELCGLTTLQE 943
Query: 262 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSV 318
+N +AFL T ++S +S +R L +M++LE LDL+ G
Sbjct: 944 LCLANVNVDDAFLRDLTCHERLRELSLNSCTRITDVSPLARMRSLEKLDLNGC-TGIVRG 1002
Query: 319 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSL 377
V C L+ L L A + L H L LSL S T+I D +S ++ M SL
Sbjct: 1003 LHVLCGLTTLQELYLRQMSVDDALLRDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSL 1059
Query: 378 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 437
+ N D+ G T +V L L L L+ L L Q V DA L L+ + L
Sbjct: 1060 E-----NMDLNGC-------TGIVRGLHVLCGLTTLQELYLRQMSVDDAFLRDLTCHERL 1107
Query: 438 IHLSLRNAS-LTDVS----------------------LHQLSSLSKLTNLSIRDAVLTNS 474
LSL + + +TDVS LH L L+ L L +R + ++
Sbjct: 1108 RKLSLNSCTRITDVSPLARMRSLEMLDLNGCTGIVRGLHVLCGLTTLQELYLRQMCVDDA 1167
Query: 475 GLGSFKPPRSLKLLDLHGGWLLTE 498
L L+ L L+ +T+
Sbjct: 1168 FLRDLTCHERLRRLSLNSCTRITD 1191
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 198/471 (42%), Gaps = 65/471 (13%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTS----------------------SALWALTGM 114
SVD ++ L LR L++ C R+T L L G+
Sbjct: 666 SVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEILDLNGCTGIVRGLHVLCGL 725
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
T L+EL L+ V V DA ++ L L +L L+ D ++ L+ +++L +L+L
Sbjct: 726 TTLQELCLAN-VNVDDAFVRDLTCHERLRRLSLNSCTRITD-VSPLARMRSLEMLNLNDC 783
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPNI 230
L L LT L+ L L V + L RL L+L T V+ L +
Sbjct: 784 TGIVRGLHELCGLTTLQELYLPKVYVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARM 843
Query: 231 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
SLE LNL+ CT I+ G L + ++ +AFL T +S +S
Sbjct: 844 RSLEMLNLNGCT--GIVRGLHELCGLTTLQELYLRQMSVDDAFLRDLTCHERLRRLSLNS 901
Query: 291 LSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVA-----CVGANLRNLNLSNTRFSSAG 342
+R L +M++LE LDL +D +V C L+ L L+N A
Sbjct: 902 CTRITDVSPLARMRSLEMLDL------NDCTGIVRGLHELCGLTTLQELCLANVNVDDAF 955
Query: 343 VGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
+ L H L LSL S T+I D +S ++ M SL+ +D++ T +V
Sbjct: 956 LRDLTCH-ERLRELSLNSCTRITD--VSPLARMRSLEKLDLNGC------------TGIV 1000
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSK 460
L L L L+ L L Q V DA L L+ + L LSL + + +TDVS L+ +
Sbjct: 1001 RGLHVLCGLTTLQELYLRQMSVDDALLRDLTCHERLRRLSLNSCTRITDVS--PLARMRS 1058
Query: 461 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 511
L N+ + GL +L+ +L+ + +DA L+ H R+
Sbjct: 1059 LENMDLNGCTGIVRGLHVLCGLTTLQ--ELYLRQMSVDDAFLRDLTCHERL 1107
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 169/399 (42%), Gaps = 56/399 (14%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTS----------------------SALWALTGM 114
SVD ++ L LR L++ C R+T L L G+
Sbjct: 879 SVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNDCTGIVRGLHELCGL 938
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
T L+EL L+ V V DA ++ L L +L L+ D ++ L+ +++L LDL G
Sbjct: 939 TTLQELCLAN-VNVDDAFLRDLTCHERLRELSLNSCTRITD-VSPLARMRSLEKLDLNGC 996
Query: 175 PVTDLVLRSLQVLTKLEYL-DLWGSQVSNRGAAV--LKMFPRLSFLNL----AWTGVTKL 227
++R L VL L L +L+ Q+S A + L RL L+L T V+ L
Sbjct: 997 TG---IVRGLHVLCGLTTLQELYLRQMSVDDALLRDLTCHERLRRLSLNSCTRITDVSPL 1053
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+ SLE ++L+ CT I+ G L + ++ +AFL T +S
Sbjct: 1054 ARMRSLENMDLNGCT--GIVRGLHVLCGLTTLQELYLRQMSVDDAFLRDLTCHERLRKLS 1111
Query: 288 NSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
+S +R L +M++LE LDL+ G V C L+ L L A +
Sbjct: 1112 LNSCTRITDVSPLARMRSLEMLDLNGC-TGIVRGLHVLCGLTTLQELYLRQMCVDDAFLR 1170
Query: 345 ILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
L H L LSL S T+I D +S ++ M SL+ +D++ T +V
Sbjct: 1171 DLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEMLDLNGC------------TGIVRG 1215
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
L L L L+ L L Q V DA L L+ + L + L
Sbjct: 1216 LHVLCGLTTLQELYLWQMCVDDALLRDLTCHERLRKMRL 1254
>gi|290982059|ref|XP_002673748.1| predicted protein [Naegleria gruberi]
gi|284087334|gb|EFC41004.1| predicted protein [Naegleria gruberi]
Length = 370
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 151/340 (44%), Gaps = 42/340 (12%)
Query: 55 IFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
+ S+ E+ K N E N++D + YLG+ + L LNV+ C
Sbjct: 26 VLDSMKELKKLNLEY------NNIDPNGIKYLGSLKQLTDLNVS-C-------------- 64
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
C L+LS HL+ + L L ++ + A+G + ++ L+ L +G
Sbjct: 65 -CYIGLNLS-----------HLILLKALTHLNITSNNIRAEGAKYIGEMKQLTKLSIGSN 112
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN--ISS 232
+ + + L +L YL++ + + GA + +L++LN+ + IS
Sbjct: 113 DIGPEGAKYISGLEQLTYLNIRSNDIKKDGAKHISEMKQLTYLNVVGNHICDGGARFISE 172
Query: 233 LECL-NLSNCTIDSILEGNENKAPLAKISL--AGTTFINEREAFLYIETSLLSFLDV--S 287
++ L NLS D EG + + L +S+ G INE+ A E L+ L +
Sbjct: 173 MKQLSNLSVGYNDIGEEGAKYISELMNVSILDIGGNSINEKGAKFIGEMKQLTDLRIYCC 232
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
N + +++ + L HL +S++ IGD+ + + + L +L++ + G +
Sbjct: 233 NIGVEGTQYISSLNQLTHLSISTNNIGDEGAKYIGQM-KQLTDLSIRENKIGIEGAKSI- 290
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
G L NL L +SG +I D ++S M L +DIS+ +I
Sbjct: 291 GQLKNLLNLYISGNEIGDNGAQFISEMNQLTILDISSINI 330
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 143/362 (39%), Gaps = 74/362 (20%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG----GLPVTDLVLRSLQVLTKLEYL 193
S+ L+KL L + +GI L SL+ L+ L++ GL ++ L+L L L +L
Sbjct: 29 SMKELKKLNLEYNNIDPNGIKYLGSLKQLTDLNVSCCYIGLNLSHLIL-----LKALTHL 83
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNE 251
++ + + GA + +L+ L++ G IS LE L N + N+
Sbjct: 84 NITSNNIRAEGAKYIGEMKQLTKLSIGSNDIGPEGAKYISGLEQLTYLN------IRSND 137
Query: 252 NKAPLAK-ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDL 308
K AK IS E L++L+V + + F+++MK L +L +
Sbjct: 138 IKKDGAKHIS----------------EMKQLTYLNVVGNHICDGGARFISEMKQLSNLSV 181
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ IG++ + ++ L N+ IL + G I++
Sbjct: 182 GYNDIGEEGAKYIS--------------------------ELMNVSILDIGGNSINEKGA 215
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
++ M L TD++ + +G E +S +LN L L++ + D
Sbjct: 216 KFIGEMKQL-------TDLRIYCCNIGVEGTQYIS-----SLNQLTHLSISTNNIGDEGA 263
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
+ K+L LS+R + + L L NL I + ++G L +L
Sbjct: 264 KYIGQMKQLTDLSIRENKIGIEGAKSIGQLKNLLNLYISGNEIGDNGAQFISEMNQLTIL 323
Query: 489 DL 490
D+
Sbjct: 324 DI 325
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 100/249 (40%), Gaps = 23/249 (9%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNV--ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
G N + E Y+ L LN+ D ++ + + + +T L + C D
Sbjct: 110 GSNDIGPEGAKYISGLEQLTYLNIRSNDIKKDGAKHISEMKQLTYLNVVGNHIC----DG 165
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G + + + L L + + +G +S L N+S+LD+GG + + + + + +L
Sbjct: 166 GARFISEMKQLSNLSVGYNDIGEEGAKYISELMNVSILDIGGNSINEKGAKFIGEMKQLT 225
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSI 246
L ++ + G + +L+ L N+ G + + L L++ I
Sbjct: 226 DLRIYCCNIGVEGTQYISSLNQLTHLSISTNNIGDEGAKYIGQMKQLTDLSIRENKIG-- 283
Query: 247 LEGNENKAPLA----------KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
+EG ++ L +I G FI+E ++ S ++ + +S +
Sbjct: 284 IEGAKSIGQLKNLLNLYISGNEIGDNGAQFISEMNQLTILDISSINITPIGIKYISNMEY 343
Query: 297 LTQMKALEH 305
LT ++ +++
Sbjct: 344 LTDLRIIDN 352
>gi|46447550|ref|YP_008915.1| hypothetical protein pc1916 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401191|emb|CAF24640.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 310
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F ++ F E + + + + L + L++L + C+ +T L LT +T
Sbjct: 67 FERIINHFSKKIEGLNFLNQAYLTNAHLLALKDCKNLKALYLEACQALTDDGLEHLTLLT 126
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG- 173
L+ LDLS C +TDAG+ HL + L+ L L+ LT DG+ L+ L L LDL
Sbjct: 127 ALQHLDLSGCWNLTDAGLVHLTPLVGLQHLKLNACYNLTDDGLVHLTPLTALQHLDLSDC 186
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGVTK 226
+ +TD L L+ LT L++L L + +++ G A L L +L NL G+
Sbjct: 187 MNLTDAGLAHLKPLTALQHLGLSCCENLTDAGLAHLAPLTGLQYLALSDCMNLTDDGLVH 246
Query: 227 LPNISSLECLNLSNC 241
L +++L+ LNL NC
Sbjct: 247 LKPLTALQHLNLRNC 261
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADC 100
L D L HL +LL +H ++L G ++ + +L L+ L + C
Sbjct: 114 LTDDGLEHL--------TLLTALQH----LDLSGCWNLTDAGLVHLTPLVGLQHLKLNAC 161
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIAL 159
+T L LT +T L+ LDLS C+ +TDAG+ HL ++ L+ L LS LT G+A
Sbjct: 162 YNLTDDGLVHLTPLTALQHLDLSDCMNLTDAGLAHLKPLTALQHLGLSCCENLTDAGLAH 221
Query: 160 LSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL 217
L+ L L L L + +TD L L+ LT L++L+L + V++ G A L L L
Sbjct: 222 LAPLTGLQYLALSDCMNLTDDGLVHLKPLTALQHLNLRNCRNVTDAGLAHLTPLKALQQL 281
Query: 218 NL 219
NL
Sbjct: 282 NL 283
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
+ + +L L+ LN+ +CR VT + L LT + L++L+L RC KVT+ G+
Sbjct: 242 DGLVHLKPLTALQHLNLRNCRNVTDAGLAHLTPLKALQQLNLRRCDKVTNTGL 294
>gi|300691655|ref|YP_003752650.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078715|emb|CBJ51374.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum PSI07]
Length = 608
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 149/359 (41%), Gaps = 44/359 (12%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
AL L L+LS + DAG L + L +L L + G L++ +L+ L
Sbjct: 277 ALATSRTLTSLNLS-SNGIDDAGAGALADNTLLTQLNLQGNRIGRGGAQALANSTSLTDL 335
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GV 224
DLG + D R+L L L + G+++ ++GA L L LNL++ GV
Sbjct: 336 DLGNNRLGDRGARALAGSKSLTSLSVRGNEIGDKGAKALARNATLKSLNLSYNLISLRGV 395
Query: 225 TKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L ++L L+L C IDS A LA + L G+ I +R A + S L+
Sbjct: 396 RALGGSATLSVLDLCACDIDSSGASALARNASLASLYL-GSNRIGDRGARALAKNSTLTR 454
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
L +S + + H + ++ G+DS L +L+L G
Sbjct: 455 LALSGNGI-------------HTTGAQALAGNDS----------LISLDLGGNEIDDDGA 491
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
LA H P L L L G +I ++ +L +D+S ++GAE LS
Sbjct: 492 AALARH-PRLISLDLRGNRIRSAGAQQLAKSATLAELDLS-------ANRIGAEGAEALS 543
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
+ + L LN+ + DA L+ LI L R + + +V L + ++LT
Sbjct: 544 RSTV-----LTTLNVSDNAIGDAGALALAKSTSLISLDARRSGIGEVGARALEANTRLT 597
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
LG L L++ C + SS AL L L L ++ D G + L STL +L
Sbjct: 398 LGGSATLSVLDLCACD-IDSSGASALARNASLASLYLG-SNRIGDRGARALAKNSTLTRL 455
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
LS G+ G L+ +L LDLGG + D +L +L LDL G+++ + GA
Sbjct: 456 ALSGNGIHTTGAQALAGNDSLISLDLGGNEIDDDGAAALARHPRLISLDLRGNRIRSAGA 515
Query: 206 AVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
L L+ L+L+ G L + L LN+S+ I
Sbjct: 516 QQLAKSATLAELDLSANRIGAEGAEALSRSTVLTTLNVSDNAI 558
>gi|149918767|ref|ZP_01907254.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
gi|149820368|gb|EDM79784.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
Length = 541
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 133/302 (44%), Gaps = 52/302 (17%)
Query: 90 RYLRSLNV----ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+YLR L + DC R L+ L + L+ L+L R VT AG+ HL LE L
Sbjct: 282 QYLRDLPIDELICDCPRFGDRGLFMLRYLEGLQVLELERSA-VTSAGLVHLAENPALEDL 340
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L L ++G L++L L L +G + D L +L L L+L +R A
Sbjct: 341 TLRGCDLDSEGFTALAALPRLRRLIVGPASLLDGKAEGLGLLVSLRELELGLDGFGDRAA 400
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
+L + +LE L+L N + EG E+ LAG
Sbjct: 401 -------------------QELAPLVNLERLDLGNTAVSD--EGLEH--------LAGMV 431
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVAC 323
+ E L++ ++ ++R L + ALE L+L + + D+ V +A
Sbjct: 432 RLRE--------------LELHHTRVTRHGLEHLQGLSALEILELDHTDVVDEGVAHLAK 477
Query: 324 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
+GA LR L L NT + GV LA L +LE L+L+ T + + +S +P L+ ++++
Sbjct: 478 LGA-LRELRLDNTLITDVGVAHLA-KLSDLERLNLANTVVTSEGVEVLSALPRLEVVNLA 535
Query: 384 NT 385
T
Sbjct: 536 GT 537
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 134/319 (42%), Gaps = 63/319 (19%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-------------- 202
+A SLQ+L+V+D +T+ L L+ L L ++ G SN
Sbjct: 236 VAKAKSLQSLAVIDTA---LTNYSLHPLKGLDHLHRIEWSGQGWSNTSPQYLRDLPIDEL 292
Query: 203 ---------RGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILE 248
RG +L+ L L L + VT L +LE L L C +DS E
Sbjct: 293 ICDCPRFGDRGLFMLRYLEGLQVLELERSAVTSAGLVHLAENPALEDLTLRGCDLDS--E 350
Query: 249 GNENKAPLAKIS--LAGTTFINEREA--------FLYIETSLLSFLDVSNSSLSRFCFLT 298
G A L ++ + G + + +A +E L F D + L+ L
Sbjct: 351 GFTALAALPRLRRLIVGPASLLDGKAEGLGLLVSLRELELGLDGFGDRAAQELAPLVNL- 409
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
E LDL ++ + D+ +E +A + LR L L +TR + G+ L G L LEIL L
Sbjct: 410 -----ERLDLGNTAVSDEGLEHLAGM-VRLRELELHHTRVTRHGLEHLQG-LSALEILEL 462
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 418
T + D +++++ + +L+ + + NT I VG + L L+ LERLNL
Sbjct: 463 DHTDVVDEGVAHLAKLGALRELRLDNT----LITDVG--------VAHLAKLSDLERLNL 510
Query: 419 EQTQVSDATLFPLSTFKEL 437
T V+ + LS L
Sbjct: 511 ANTVVTSEGVEVLSALPRL 529
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N E ++L G +V E + +L LR L + R VT L L G++ L+ L+L
Sbjct: 408 NLERLDL-GNTAVSDEGLEHLAGMVRLRELELHHTR-VTRHGLEHLQGLSALEILELDHT 465
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
V D G+ HL + L +L L T +T G+A L+ L +L L+L VT + L
Sbjct: 466 -DVVDEGVAHLAKLGALRELRLDNTLITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLS 524
Query: 186 VLTKLEYLDLWGSQVSN 202
L +LE ++L G++ +
Sbjct: 525 ALPRLEVVNLAGTRARD 541
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 22/197 (11%)
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
L+ L L + +SAG+ LA + P LE L+L G +D + ++ +P L+ + +
Sbjct: 312 GLQVLELERSAVTSAGLVHLAEN-PALEDLTLRGCDLDSEGFTALAALPRLRRLIVGPAS 370
Query: 387 I-KGFIQQVGAETDLVLSLTALQ---------------NLNHLERLNLEQTQVSDATLFP 430
+ G + +G L++SL L+ L +LERL+L T VSD L
Sbjct: 371 LLDGKAEGLG----LLVSLRELELGLDGFGDRAAQELAPLVNLERLDLGNTAVSDEGLEH 426
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L+ L L L + +T L L LS L L + + + G+ +L+ L L
Sbjct: 427 LAGMVRLRELELHHTRVTRHGLEHLQGLSALEILELDHTDVVDEGVAHLAKLGALRELRL 486
Query: 491 HGGWLLTEDAILQFCKM 507
L+T+ + K+
Sbjct: 487 D-NTLITDVGVAHLAKL 502
>gi|46446665|ref|YP_008030.1| hypothetical protein pc1031 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400306|emb|CAF23755.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 553
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 151/313 (48%), Gaps = 34/313 (10%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ L+++ C +T L LT +T L+ LDLS C +TD G+ HL + L
Sbjct: 237 LAHLTPLTALQRLDLSYCENLTDDGLAHLTPLTALQHLDLSYCENLTDDGLAHLAPLKAL 296
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQ 199
++L L+ LT G+ L++L L LDL +TD L L+ LT L++LDL
Sbjct: 297 QRLALTNCKNLTDAGLTHLTTLTALQHLDLSQYWKLTDAGLAHLKPLTALQHLDLSLCYY 356
Query: 200 VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+++ G A LK L L NL G+ L + L+ LNLS C
Sbjct: 357 LTDAGIAHLKPLTALQHLDLSQYRNLTDAGLAHLTPLMGLQYLNLSAC------------ 404
Query: 254 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SM 312
++ AG + A ++ S S +++++ L LT AL+HL LS
Sbjct: 405 ---KNLTDAGLAHLAPLTALQHLNLS--SCYNLTDAGLVHLIPLT---ALQHLYLSDWEN 456
Query: 313 IGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISY 370
+ D + +A + A L++LNLSN R + G+ L L L L LS + D +++
Sbjct: 457 LTDTGLAHLAPLTA-LQHLNLSNCRKLTDDGLAHLKS-LVTLTHLDLSWCKNFTDEGLTH 514
Query: 371 MSMMPSLKFIDIS 383
++ + L+++ +S
Sbjct: 515 LTPLTGLQYLVLS 527
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 183/375 (48%), Gaps = 49/375 (13%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWM--AYLG 87
+R L RL +L +++ L+ + + H + IE N D ++ A+L
Sbjct: 156 RRCQLNRLKNYLEFTVVSALLNQTSQLAEFKRIINHFLKKIETL--NFSDNAYLTDAHLL 213
Query: 88 AFRYLRSLNVADCRR---VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
A + +L V C++ VT + L LT +T L+ LDLS C +TD G+ HL ++ L+
Sbjct: 214 ALKDCENLKVLHCKKCWGVTDAGLAHLTPLTALQRLDLSYCENLTDDGLAHLTPLTALQH 273
Query: 145 LWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL---WGSQ 199
L LS LT DG+A L+ L+ L L L +TD L L LT L++LDL W +
Sbjct: 274 LDLSYCENLTDDGLAHLAPLKALQRLALTNCKNLTDAGLTHLTTLTALQHLDLSQYW--K 331
Query: 200 VSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+++ G A LK L L+L+ G+ L +++L+ L+LS N
Sbjct: 332 LTDAGLAHLKPLTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLSQ-------YRNLTD 384
Query: 254 APLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
A LA ++ L G ++N L + +++++ L+ LT AL+HL+LSS
Sbjct: 385 AGLAHLTPLMGLQYLN-----------LSACKNLTDAGLAHLAPLT---ALQHLNLSSCY 430
Query: 313 IGDDS--VEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAI 368
D+ V ++ L++L LS+ + G+ LA L L+ L+LS ++ D +
Sbjct: 431 NLTDAGLVHLIPLTA--LQHLYLSDWENLTDTGLAHLAP-LTALQHLNLSNCRKLTDDGL 487
Query: 369 SYMSMMPSLKFIDIS 383
+++ + +L +D+S
Sbjct: 488 AHLKSLVTLTHLDLS 502
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 30/229 (13%)
Query: 297 LTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
LT + AL+HLDLS + DD + +A + A L+ L L+N + + L L+
Sbjct: 265 LTPLTALQHLDLSYCENLTDDGLAHLAPLKA-LQRLALTNCKNLTDAGLTHLTTLTALQH 323
Query: 356 LSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN--- 411
L LS ++ D ++++ + +L+ +D+S + ++ G + LTALQ+L+
Sbjct: 324 LDLSQYWKLTDAGLAHLKPLTALQHLDLS---LCYYLTDAGIAH--LKPLTALQHLDLSQ 378
Query: 412 ----------------HLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVSLH 453
L+ LNL + ++DA L L+ L HL+L + +LTD L
Sbjct: 379 YRNLTDAGLAHLTPLMGLQYLNLSACKNLTDAGLAHLAPLTALQHLNLSSCYNLTDAGLV 438
Query: 454 QLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
L L+ L +L + D LT++GL P +L+ L+L LT+D +
Sbjct: 439 HLIPLTALQHLYLSDWENLTDTGLAHLAPLTALQHLNLSNCRKLTDDGL 487
>gi|406830023|ref|ZP_11089617.1| hypothetical protein SpalD1_00247 [Schlesneria paludicola DSM
18645]
Length = 374
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 162/342 (47%), Gaps = 42/342 (12%)
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 232
D + +L+ TK+ L+L +++++ G ++ F L+ L LA+T G+ +L ++ +
Sbjct: 65 DGYVHALKPFTKMTSLNLNSTKITDSGLKGIRNFTSLTMLTLAFTKITDVGLVELKDLKN 124
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
L L+L CT I+ G I E + + S F DV L+
Sbjct: 125 LTRLDLGGCT---------------AITDVGLNEIKELTSLASLHLSYTQFTDVGLKELA 169
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
+K L +L+L + I DD ++ + + + R + T+ S G+ L G L N
Sbjct: 170 ------DLKCLSNLELRGTQITDDGLKELGTLTSLTRLTLMQ-TKISDLGLRELKG-LRN 221
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
L+IL L T+I D + + + + + + F ++ E + ++ LN+
Sbjct: 222 LQILDLGLTEITDEGLKEIIDLKQIHSLYL-------FGDEITDE-----GMQSIGELNN 269
Query: 413 LERLNLEQTQVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 471
L L+L QT++++ L +S L + +TDV L ++ ++++LTN+++ +
Sbjct: 270 LTELDLIQTEITNEGLKEISGLKNLKKLHLLNDGKITDVGLKEIGTMTQLTNINLGRTGI 329
Query: 472 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 513
TN+GL + ++L+ LD+ +T + ++ K P++++
Sbjct: 330 TNAGLKELRNLKNLQSLDVSETE-VTSEGVVALQKELPKLDI 370
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 171/377 (45%), Gaps = 38/377 (10%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E IEL G + E + R + +N+ R + AL T + L+L+ K
Sbjct: 32 EKIELLGGKVMRDESLPG----RPVIYVNLQQSERFGDGYVHALKPFTKMTSLNLN-STK 86
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQV 186
+TD+G+K + + ++L L L+ T +T G+ L L+NL+ LDLGG +TD+ L ++
Sbjct: 87 ITDSGLKGIRNFTSLTMLTLAFTKITDVGLVELKDLKNLTRLDLGGCTAITDVGLNEIKE 146
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LT L L L +Q ++ G L LS L L T +T + E L++ T ++
Sbjct: 147 LTSLASLHLSYTQFTDVGLKELADLKCLSNLELRGTQIT---DDGLKELGTLTSLTRLTL 203
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
++ KIS G + E + ++ L ++++ L L Q+ +L
Sbjct: 204 MQ--------TKISDLG---LRELKGLRNLQILDLGLTEITDEGLKEIIDLKQIHSLY-- 250
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
L I D+ ++ + + NL L+L T ++ G+ ++G ++ L+ +I D
Sbjct: 251 -LFGDEITDEGMQSIGELN-NLTELDLIQTEITNEGLKEISGLKNLKKLHLLNDGKITDV 308
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
+ + M L I++ T I L L+NL +L+ L++ +T+V+
Sbjct: 309 GLKEIGTMTQLTNINLGRTGITNA------------GLKELRNLKNLQSLDVSETEVTSE 356
Query: 427 TLFPLSTFKELIHLSLR 443
+ L KEL L ++
Sbjct: 357 GVVALQ--KELPKLDIK 371
>gi|290970865|ref|XP_002668286.1| predicted protein [Naegleria gruberi]
gi|284081599|gb|EFC35542.1| predicted protein [Naegleria gruberi]
Length = 368
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 167/369 (45%), Gaps = 44/369 (11%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++ D K + + L L + + +G+ +S ++ L L++ + D ++S+
Sbjct: 13 QIGDKEAKFISEMKQLTSLDIYNNRIGDEGVKSISEMKQLVSLNIYNNRIGDEGVKSIIE 72
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA--------WTGVTKLPNISSLECLN- 237
+ +L LD+ G+++ + G + +L+ LN++ T ++++ ++SL N
Sbjct: 73 MKQLTSLDIGGNRIGDEGVKFISEMKQLTSLNISENQIGDKEATFISEMKQLTSLNIYNN 132
Query: 238 -LSNCTIDSILEGNENKA---PLAKISLAGTTFINEREAFLYI---------------ET 278
+ + + SI+E + K+ +IS+ G FI+E + + + E
Sbjct: 133 RIGDEGVKSIIEMKQLKSLDIGRNQISVEGAKFISEMKQLVSLNIYNNRIDEGVKSISEM 192
Query: 279 SLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
L+ L+++ + + F+++MK L LD+ ++ IGD+ ++ + L +LN+ N
Sbjct: 193 KQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIFISKM-KQLTSLNIYNN 251
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 396
R GV + + L L + +I D + ++S M L +DIS ++G
Sbjct: 252 RIGDEGVKSII-EMKRLTSLDIGRNRIGDEGVKFISEMKQLASLDISEN-------RIGD 303
Query: 397 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 456
E + ++ + L LN+ + ++ D +S K L L + + D + +S
Sbjct: 304 E-----GVKSISEMKQLTSLNISENRIGDEGAKSISEMKRLKSLDIGGNQIGDEGVKFIS 358
Query: 457 SLSKLTNLS 465
+ +L +L+
Sbjct: 359 EMKQLASLN 367
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 161/360 (44%), Gaps = 32/360 (8%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN---- 218
++ L+ L + G + D + + + +L LD++ +++ + G + +L LN
Sbjct: 1 MKQLTSLIISGNQIGDKEAKFISEMKQLTSLDIYNNRIGDEGVKSISEMKQLVSLNIYNN 60
Query: 219 -LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE-----REA 272
+ GV + + L L++ I G+E ++++ + I+E +EA
Sbjct: 61 RIGDEGVKSIIEMKQLTSLDIGGNRI-----GDEGVKFISEMKQLTSLNISENQIGDKEA 115
Query: 273 FLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
E L+ L++ N+ + + +MK L+ LD+ + I + + ++ + L +
Sbjct: 116 TFISEMKQLTSLNIYNNRIGDEGVKSIIEMKQLKSLDIGRNQISVEGAKFISEM-KQLVS 174
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG- 389
LN+ N R GV ++ + L L+++ +I D ++S M L +DI N I
Sbjct: 175 LNIYNNRI-DEGVKSIS-EMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDE 232
Query: 390 ---FIQQVGAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
FI ++ T L + + ++ + L L++ + ++ D + +S K+L
Sbjct: 233 GAIFISKMKQLTSLNIYNNRIGDEGVKSIIEMKRLTSLDIGRNRIGDEGVKFISEMKQLA 292
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
L + + D + +S + +LT+L+I + + + G S + LK LD+ G + E
Sbjct: 293 SLDISENRIGDEGVKSISEMKQLTSLNISENRIGDEGAKSISEMKRLKSLDIGGNQIGDE 352
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E ++ + L SLN+ + R+ + ++ M L LD+ R ++ D G+K
Sbjct: 227 NRIGDEGAIFISKMKQLTSLNIYN-NRIGDEGVKSIIEMKRLTSLDIGRN-RIGDEGVKF 284
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +SE + +G+ +S ++ L+ L++ + D +S+ + +L+ LD+
Sbjct: 285 ISEMKQLASLDISENRIGDEGVKSISEMKQLTSLNISENRIGDEGAKSISEMKRLKSLDI 344
Query: 196 WGSQVSNRGAAVLKMFPRLSFLN 218
G+Q+ + G + +L+ LN
Sbjct: 345 GGNQIGDEGVKFISEMKQLASLN 367
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 80/168 (47%), Gaps = 7/168 (4%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + + ++ + L SL++ + R A++ ++ M L L++ ++ D G+K
Sbjct: 202 ENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIF-ISKMKQLTSLNIYNN-RIGDEGVK 259
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
++ + L L + + +G+ +S ++ L+ LD+ + D ++S+ + +L L+
Sbjct: 260 SIIEMKRLTSLDIGRNRIGDEGVKFISEMKQLASLDISENRIGDEGVKSISEMKQLTSLN 319
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLN 237
+ +++ + GA + RL L++ GV + + L LN
Sbjct: 320 ISENRIGDEGAKSISEMKRLKSLDIGGNQIGDEGVKFISEMKQLASLN 367
>gi|149174540|ref|ZP_01853166.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148846650|gb|EDL60987.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 309
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 15/255 (5%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K+ DAG+ +L +S L KL LS + +T DG+ L SL++L + L G+PV+D L +
Sbjct: 49 KLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPVSDSGLAEFKK 108
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPR-----LSFLNLAWTGVTKLPNISSLECLNLSNC 241
L+ LE L+L ++V++ G LK L+ L + G+ L + SLE L LS
Sbjct: 109 LSNLEILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITADGLAHLSGLKSLETLGLSET 168
Query: 242 TI-DSILEGNENKAPLAKISLAGTTFINER----EAFLYIETSLLSFLDVSNSSLSRFCF 296
I D L + L + L T +E + ++ L +++ L +
Sbjct: 169 QITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITDDGLK---Y 225
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L +MK +E L+L+ + I + + + + N+ ++NL NT S + L + NL L
Sbjct: 226 LIKMKDMEWLELNDTQITNAGISEIKVL-ENIVDMNLRNTDVSDKCITSLK-KMKNLGTL 283
Query: 357 SLSGTQIDDYAISYM 371
+ GT+I + I+ +
Sbjct: 284 YIDGTEITEEGIAKL 298
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 98/179 (54%), Gaps = 8/179 (4%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L G D + M +L + + LR + + V+ S L ++ L+ L+LSR KVT
Sbjct: 67 LDLSGSKVTD-DGMVHLKSLKSLREITLHGIP-VSDSGLAEFKKLSNLEILNLSRT-KVT 123
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DAG+KHL S+ +L++L+L+ +TADG+A LS L++L L L +TD L L+ L K
Sbjct: 124 DAGLKHLKSLDSLKELFLTGLEITADGLAHLSGLKSLETLGLSETQITDDALAHLKTLKK 183
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI 243
L L L +Q+++ G +K RL L L T +T L + +E L L++ I
Sbjct: 184 LRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITDDGLKYLIKMKDMEWLELNDTQI 242
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
+L ++ L LDLS S + DD + + + +LR + L S +G+ L NL
Sbjct: 55 LVYLGRLSKLRKLDLSGSKVTDDGMVHLKSL-KSLREITLHGIPVSDSGLAEFK-KLSNL 112
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
EIL+LS T++ D + ++ + SLK + ++ +I L L L L
Sbjct: 113 EILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITAD------------GLAHLSGLKSL 160
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
E L L +TQ++D L L T K+L L LR+ +TD L Q+ L++L L +R+ +T+
Sbjct: 161 ETLGLSETQITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITD 220
Query: 474 SGLGSFKPPRSLKLLDLH 491
GL + ++ L+L+
Sbjct: 221 DGLKYLIKMKDMEWLELN 238
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 41/296 (13%)
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----- 219
N+S + G + D L L L+KL LDL GS+V++ G LK L + L
Sbjct: 39 NISQVSFSGSKLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPV 98
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
+ +G+ + +S+LE LNLS K++ AG + ++ +
Sbjct: 99 SDSGLAEFKKLSNLEILNLSRT----------------KVTDAGLKHLKSLDSLKEL--- 139
Query: 280 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
L+ L+++ L+ L+ +K+LE L LS + I DD++ + + LR L L +T+ +
Sbjct: 140 FLTGLEITADGLA---HLSGLKSLETLGLSETQITDDALAHLKTL-KKLRVLLLRDTQIT 195
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
G+ + G L L+ L L TQI D + Y+ M ++++++++T I
Sbjct: 196 DEGLKQIKG-LTRLQRLWLRNTQITDDGLKYLIKMKDMEWLELNDTQITNA--------- 245
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
++ ++ L ++ +NL T VSD + L K L L + +T+ + +L
Sbjct: 246 ---GISEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTLYIDGTEITEEGIAKL 298
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 24/265 (9%)
Query: 254 APLAKISLAGTTFINEREAFLYIETSL----LSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
+ L K+ L+G+ ++ L SL L + VS+S L+ F L+ LE L+LS
Sbjct: 62 SKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPVSDSGLAEFKKLSN---LEILNLS 118
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ + D ++ + + + L+ L L+ ++ G+ L+G L +LE L LS TQI D A++
Sbjct: 119 RTKVTDAGLKHLKSLDS-LKELFLTGLEITADGLAHLSG-LKSLETLGLSETQITDDALA 176
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
++ + L+ + + +T I TD L ++ L L+RL L TQ++D L
Sbjct: 177 HLKTLKKLRVLLLRDTQI----------TDE--GLKQIKGLTRLQRLWLRNTQITDDGLK 224
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L K++ L L + +T+ + ++ L + ++++R+ +++ + S K ++L L
Sbjct: 225 YLIKMKDMEWLELNDTQITNAGISEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTLY 284
Query: 490 LHGGWLLTEDAILQFCKMHP--RIE 512
+ G +TE+ I + K P R+E
Sbjct: 285 IDGTE-ITEEGIAKLEKSLPYCRVE 308
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 13/193 (6%)
Query: 86 LGAFRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
L F+ L +L + + R VT + L L + LKEL L+ +++T G+ HL + +LE
Sbjct: 103 LAEFKKLSNLEILNLSRTKVTDAGLKHLKSLDSLKELFLT-GLEITADGLAHLSGLKSLE 161
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
L LSET +T D +A L +L+ L VL L +TD L+ ++ LT+L+ L L +Q+++
Sbjct: 162 TLGLSETQITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITDD 221
Query: 204 GAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
G L + +L L T G++++ + ++ +NL N + ++ L K
Sbjct: 222 GLKYLIKMKDMEWLELNDTQITNAGISEIKVLENIVDMNLRNTDV-----SDKCITSLKK 276
Query: 259 ISLAGTTFINERE 271
+ GT +I+ E
Sbjct: 277 MKNLGTLYIDGTE 289
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 374 MPSLKFIDIS-NTDIKGFIQQVG-AETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFP 430
+ SLK I + D G I QV + + LV L L L+ L +L+L ++V+D +
Sbjct: 22 IKSLKEISANLKMDYNGNISQVSFSGSKLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVH 81
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L + K L ++L ++D L + LS L L++ +T++GL K SLK L L
Sbjct: 82 LKSLKSLREITLHGIPVSDSGLAEFKKLSNLEILNLSRTKVTDAGLKHLKSLDSLKELFL 141
Query: 491 HG 492
G
Sbjct: 142 TG 143
>gi|149175664|ref|ZP_01854283.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
gi|148845383|gb|EDL59727.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
Length = 660
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 161/381 (42%), Gaps = 65/381 (17%)
Query: 134 KHLLSIST---LEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTK 189
+HL +ST LEKL L GL D +A L SL L LDL G + D+ L L+ L +
Sbjct: 301 RHLNDLSTFRKLEKLALRNCGLDEDDVATLGSLTQLRELDLSGNSSLNDVALFHLRNLNQ 360
Query: 190 LEYLDL--WGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNCT 242
LE L + + ++++ +G L+ +L L+L G+ + ++SSLE LNL
Sbjct: 361 LEELKVASYYNRITEKGLQYLRQPRKLKTLDLIGCMLKADGLAAIGDVSSLETLNLKVYC 420
Query: 243 IDSI-----------------------LEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
+ + L+G E + L+++ E EA ++T
Sbjct: 421 PERVDAHFFDPLRHLKSLRELTLECRQLKGGEGLSSLSQLP--------ELEALHLLQTK 472
Query: 280 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
L ++ +L+ L L+S + D V + + L +LNL R
Sbjct: 473 LQD---------EDIRWIANCNSLKALTLNSYEVTDQGVSSLGSL-KQLESLNLDRCRLD 522
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+G+ L L L +SL+ T + D I ++S + LK + + N +
Sbjct: 523 GSGLVSLQ-QLHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLTLENGRVSS---------- 571
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+L +L++L L LNL VSD L+ L L+L ++++ L L +
Sbjct: 572 --ATLESLKDLKKLSELNLTNCPVSDEICELLTQMSALRTLNLNKTKVSNIGLEGLQKAT 629
Query: 460 KLTNLSIRDAVLTNSGLGSFK 480
L LS+R +T G+ +
Sbjct: 630 GLETLSLRRTKVTRQGVQQLR 650
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 162/385 (42%), Gaps = 62/385 (16%)
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
SE L L L L L L G+ + L +LE L L + +S++
Sbjct: 224 SEVRLAEIDFTQLRGLDGLRSLTLEGVNLYGRA-EGLGFFPRLEALTLINTNISDQDRGR 282
Query: 208 LKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSILEGNENKAPLA------ 257
+ F +L L L + + L LE L L NC +D ++ A L
Sbjct: 283 ITTFTQLKTLRLENVHLGRHLNDLSTFRKLEKLALRNCGLDE-----DDVATLGSLTQLR 337
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-----FLTQMKALEHLDLSSSM 312
++ L+G + +N+ F + L L V+ S +R +L Q + L+ LDL M
Sbjct: 338 ELDLSGNSSLNDVALFHLRNLNQLEELKVA-SYYNRITEKGLQYLRQPRKLKTLDLIGCM 396
Query: 313 IGDDSVEMVACVGANLRNLNLS--------------------------NTRFSSAGVGIL 346
+ D + + V ++L LNL R G G+
Sbjct: 397 LKADGLAAIGDV-SSLETLNLKVYCPERVDAHFFDPLRHLKSLRELTLECRQLKGGEGLS 455
Query: 347 A-GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 405
+ LP LE L L T++ D I +++ SLK + +++ ++ TD +S
Sbjct: 456 SLSQLPELEALHLLQTKLQDEDIRWIANCNSLKALTLNSYEV----------TDQGVS-- 503
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
+L +L LE LNL++ ++ + L L L +SL + +TD + LSSLS+L L+
Sbjct: 504 SLGSLKQLESLNLDRCRLDGSGLVSLQQLHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLT 563
Query: 466 IRDAVLTNSGLGSFKPPRSLKLLDL 490
+ + ++++ L S K + L L+L
Sbjct: 564 LENGRVSSATLESLKDLKKLSELNL 588
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V + ++ LG+ + L SLN+ CR + S L +L + L ++ L+ VTDA + L
Sbjct: 497 VTDQGVSSLGSLKQLESLNLDRCR-LDGSGLVSLQQLHRLTDVSLNH-TGVTDAVIPFLS 554
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S+S L++L L +++ + L L+ LS L+L PV+D + L ++ L L+L
Sbjct: 555 SLSQLKRLTLENGRVSSATLESLKDLKKLSELNLTNCPVSDEICELLTQMSALRTLNLNK 614
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 243
++VSN G L+ L L+L T VT+ + L + L++C I
Sbjct: 615 TKVSNIGLEGLQKATGLETLSLRRTKVTR-QGVQQLRTV-LADCQI 658
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
D W+A + + L +LN + VT + +L + L+ L+L RC ++ +G+ L
Sbjct: 477 DIRWIANCNSLKAL-TLNSYE---VTDQGVSSLGSLKQLESLNLDRC-RLDGSGLVSLQQ 531
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ L + L+ TG+T I LSSL L L L V+ L SL+ L KL L+L
Sbjct: 532 LHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLTLENGRVSSATLESLKDLKKLSELNLTNC 591
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
VS+ +L L LNL T G+ L + LE L+L +
Sbjct: 592 PVSDEICELLTQMSALRTLNLNKTKVSNIGLEGLQKATGLETLSLRRTKV 641
>gi|149177419|ref|ZP_01856023.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148843752|gb|EDL58111.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 375
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 155/395 (39%), Gaps = 103/395 (26%)
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
E+D R K+ DA +K + +S L L L+ET P+TD
Sbjct: 76 EVDF-RGTKIDDAALKEIAGLSHLRSLLLNET------------------------PITD 110
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 238
L S+ +T LE LDL ++N+ ++ L +S L+ L L
Sbjct: 111 AALESVGKVTTLENLDLRNCSLNNKA-------------------ISYLTGLSKLKALRL 151
Query: 239 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 298
S GN S + + ++ +L FL VS LS+ L
Sbjct: 152 S---------GN---------SDIDDDAMADINQLTNLKALMLDFLWVSGDGLSQ---LK 190
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
+ LE L L+ +++ DD + + T+F P L+ L
Sbjct: 191 DLNKLEELYLAKTLVDDDGLATL--------------TQF------------PKLKKTRL 224
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 418
S QI D ++ + +P L+ ID+S + + G + L L L++LNL
Sbjct: 225 SQNQISDEGLAVFAKIPQLEEIDLSENSL---LSDAG--------MKHLSGLGKLKKLNL 273
Query: 419 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 478
+ ++DA + PL L L+L N LT+ L L + KL L + +++ GL
Sbjct: 274 WRVGLTDAGVEPLQGLTSLEWLNLDNTRLTNAGLKYLKDMQKLEFLHLGSTAVSDEGLKH 333
Query: 479 FKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 513
+P SLK L L +TE + + K P E+
Sbjct: 334 LEPLTSLKELKLT-RTAVTEKGVAELKKKLPNTEI 367
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 10/161 (6%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
VD + +A L F L+ ++ +++ L + L+E+DLS ++DAGMKHL
Sbjct: 205 VDDDGLATLTQFPKLKKTRLSQ-NQISDEGLAVFAKIPQLEEIDLSENSLLSDAGMKHLS 263
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L+KL L GLT G+ L L +L L+L +T+ L+ L+ + KLE+L L
Sbjct: 264 GLGKLKKLNLWRVGLTDAGVEPLQGLTSLEWLNLDNTRLTNAGLKYLKDMQKLEFLHLGS 323
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVT---------KLPN 229
+ VS+ G L+ L L L T VT KLPN
Sbjct: 324 TAVSDEGLKHLEPLTSLKELKLTRTAVTEKGVAELKKKLPN 364
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 63/320 (19%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++ RG +D + + +LRSL + + +T +AL ++ +T L+ LDL C +
Sbjct: 77 VDFRG-TKIDDAALKEIAGLSHLRSLLLNETP-ITDAALESVGKVTTLENLDLRNC-SLN 133
Query: 130 DAGMKHLLSISTLEKLWLSETG-------------------------LTADGIALLSSLQ 164
+ + +L +S L+ L LS ++ DG++ L L
Sbjct: 134 NKAISYLTGLSKLKALRLSGNSDIDDDAMADINQLTNLKALMLDFLWVSGDGLSQLKDLN 193
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-- 222
L L L V D L +L KL+ L +Q+S+ G AV P+L ++L+
Sbjct: 194 KLEELYLAKTLVDDDGLATLTQFPKLKKTRLSQNQISDEGLAVFAKIPQLEEIDLSENSL 253
Query: 223 ----GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIE 277
G+ L + L+ LNL + D+ +E L G T
Sbjct: 254 LSDAGMKHLSGLGKLKKLNLWRVGLTDAGVE-----------PLQGLTS----------- 291
Query: 278 TSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
L +L++ N+ L+ +L M+ LE L L S+ + D+ ++ + + +L+ L L+
Sbjct: 292 ---LEWLNLDNTRLTNAGLKYLKDMQKLEFLHLGSTAVSDEGLKHLEPL-TSLKELKLTR 347
Query: 336 TRFSSAGVGILAGHLPNLEI 355
T + GV L LPN EI
Sbjct: 348 TAVTEKGVAELKKKLPNTEI 367
>gi|124004058|ref|ZP_01688905.1| Rab family protein [Microscilla marina ATCC 23134]
gi|123990637|gb|EAY30117.1| Rab family protein [Microscilla marina ATCC 23134]
Length = 1165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 176/408 (43%), Gaps = 88/408 (21%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L ++L L + S L L + L +LDLS ++ D + L S+++L+ L
Sbjct: 195 LAPLQHLTCLTMLSLHHNKISDLAPLQKLRGLLKLDLSNN-QLDD--LHPLKSLNSLQSL 251
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L ++ + L +L +L ++ L PVTDL LQ L L+ LDL +Q+S+
Sbjct: 252 VLRNNQIS--DLTPLQALHSLQLIVLRDNPVTDLT--PLQSLRNLQSLDLRNNQISD--- 304
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
+T L N+SSL+ ++L + I+
Sbjct: 305 ------------------LTPLQNLSSLQSIDLRHNPIN--------------------- 325
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
+ L +D+ + ++ L + LE +DLS + I D +
Sbjct: 326 -----DLLPLQNLPNLQSIDLKYNHINDLAPLQNLPNLESIDLSDNQISDLTP------- 373
Query: 326 ANLRNL-NLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
L+NL NL + S+ V LA +LPNLE + LS QI+D A + + L+ ID+
Sbjct: 374 --LQNLSNLQSIDLSNNQVNHLASLQYLPNLESIDLSDNQINDLAP--LQNLGDLQSIDL 429
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
SN I LT LQNL +LE ++L Q+SD T PL L ++L
Sbjct: 430 SNNQIH--------------DLTPLQNLPNLESIDLSDNQISDLT--PLQNLGSLQSINL 473
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
RN ++D+S L +L L +++ D + S L + LK +DL
Sbjct: 474 RNNQVSDLS--PLQALHDLQAINLSDNQI--SDLAPLQKLPHLKSIDL 517
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 140/333 (42%), Gaps = 50/333 (15%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
H+ + I LR D L + LR+L D R S L L ++ L+ +DL R
Sbjct: 268 HSLQLIVLRDNPVTD------LTPLQSLRNLQSLDLRNNQISDLTPLQNLSSLQSIDL-R 320
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
+ D L L + + +A L +L NL +DL ++DL L
Sbjct: 321 HNPINDLLPLQNLPNLQSIDLKYNHI----NDLAPLQNLPNLESIDLSDNQISDLT--PL 374
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP---NISSLECLNLSNC 241
Q L+ L+ +DL +QV++ A L+ P L ++L+ + L N+ L+ ++LSN
Sbjct: 375 QNLSNLQSIDLSNNQVNH--LASLQYLPNLESIDLSDNQINDLAPLQNLGDLQSIDLSNN 432
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
I + PL + L +D+S++ +S L +
Sbjct: 433 QIHDL-------TPLQNLPN-------------------LESIDLSDNQISDLTPLQNLG 466
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
+L+ ++L ++ + D S +L+ +NLS+ + S LP+L+ + L
Sbjct: 467 SLQSINLRNNQVSDLSPLQAL---HDLQAINLSDNQISDLAP---LQKLPHLKSIDLRDN 520
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 394
QI+ + ++ P L + + + I+G ++
Sbjct: 521 QIEVFPEHLITNCPQLTSLHLYHNPIQGLPPEI 553
>gi|290979162|ref|XP_002672303.1| predicted protein [Naegleria gruberi]
gi|284085879|gb|EFC39559.1| predicted protein [Naegleria gruberi]
Length = 371
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 153/327 (46%), Gaps = 27/327 (8%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV---KVTDAG 132
N + E Y+ + L +L+++ + + + LK+L C+ + D G
Sbjct: 36 NKIGVEGAKYISELKQLTNLDIS----YNNIGAEGVEHIGNLKQLTF-LCIYHNNIGDEG 90
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
KHL ++ L L+ + + +G+ + L+ LS L++ V D + L L +L
Sbjct: 91 AKHLSALKQLTYLYTAFNNIGVEGVKYIIKLKQLSYLNICSNKVGDEGAKYLSELKQLTN 150
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSIL 247
L++ S + +G + +L+ LN++ G + + L CLN+ ID +
Sbjct: 151 LNISNSNICAKGVEHITEMNQLTILNISTNNIGIEGAKYIGKLKQLTCLNIYYSNID--I 208
Query: 248 EGNENKAPLAKISLAGTTFIN-EREAFLYI-ETSLLSFLDVSNSSLSRFC-----FLTQM 300
EG + + + +++ ++ N E YI + L+ L + N+ + C +++++
Sbjct: 209 EGAKYISEMKQLTDLNISYNNIGIEGAKYIGKLKQLTCLTIYNNYI---CDEGAKYISEL 265
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
L +L++ S+ IGD+ + ++ + L NL++S + + GV +A L L ILS S
Sbjct: 266 NQLTNLNIYSNNIGDEGAKYISEL-KQLTNLDISVNQIGAKGVKYIA-ELNQLTILSASL 323
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDI 387
I D Y+S + L +DIS+ +I
Sbjct: 324 NNIRDEGAKYISELKQLTNLDISSNNI 350
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 137/313 (43%), Gaps = 49/313 (15%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRL-----SFLNLAWTGVTKLPNISSLECLNLSNC 241
L +L +L + +++ GA + +L S+ N+ GV + N+ L L + +
Sbjct: 25 LKQLTHLYISSNKIGVEGAKYISELKQLTNLDISYNNIGAEGVEHIGNLKQLTFLCIYHN 84
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
I EG ++ + L +++ T F +N + ++ ++K
Sbjct: 85 NIGD--EGAKHLSALKQLTYLYTAF--------------------NNIGVEGVKYIIKLK 122
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
L +L++ S+ +GD+ + ++ + L NLN+SN+ + GV + + L IL++S
Sbjct: 123 QLSYLNICSNKVGDEGAKYLSEL-KQLTNLNISNSNICAKGVEHIT-EMNQLTILNISTN 180
Query: 362 QIDDYAISYMSMMPSLKFIDI--SNTDIKG--FIQQVGAETDLVLSLTALQNLNHLERLN 417
I Y+ + L ++I SN DI+G +I ++ TDL +S +
Sbjct: 181 NIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAKYISEMKQLTDLNISYN---------NIG 231
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 477
+E + + K+L L++ N + D +S L++LTNL+I + + G
Sbjct: 232 IEGAKY-------IGKLKQLTCLTIYNNYICDEGAKYISELNQLTNLNIYSNNIGDEGAK 284
Query: 478 SFKPPRSLKLLDL 490
+ L LD+
Sbjct: 285 YISELKQLTNLDI 297
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
+++++K L HL +SS+ IG + + ++ + L NL++S + GV + G+L L
Sbjct: 21 YISELKQLTHLYISSNKIGVEGAKYISEL-KQLTNLDISYNNIGAEGVEHI-GNLKQLTF 78
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L + I D ++S + L ++ + +G E + + L L
Sbjct: 79 LCIYHNNIGDEGAKHLSALKQLTYLYTA-------FNNIGVE-----GVKYIIKLKQLSY 126
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LN+ +V D LS K+L +L++ N+++ + ++ +++LT L+I + G
Sbjct: 127 LNICSNKVGDEGAKYLSELKQLTNLNISNSNICAKGVEHITEMNQLTILNISTNNIGIEG 186
Query: 476 ---LGSFKPPRSLKL----LDLHGGWLLTE 498
+G K L + +D+ G ++E
Sbjct: 187 AKYIGKLKQLTCLNIYYSNIDIEGAKYISE 216
>gi|87311782|ref|ZP_01093896.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
gi|87285456|gb|EAQ77376.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
Length = 427
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 46/361 (12%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTD + +LL + L + T ++ GI LS+L++LSVL L +++ L S+ L
Sbjct: 95 VTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSVLQLRRTNISNKSLESMLQL 154
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 242
KL YLDL +++ G ++ P + L L G+ L +S L+ LN+
Sbjct: 155 PKLRYLDLRYDDITDAGMEIVAKMPNMEVLRLEGAIVGDEGLAHLTGLSKLKFLNVRGTN 214
Query: 243 I-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQM 300
+ D+ + N L + GT E +L T + + L + F L +M
Sbjct: 215 VTDAGFKSIANLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEM 274
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K L++L L + + +E + + L++L++S T F G+ I G NLE L+L
Sbjct: 275 KQLQNLMLRQTRVAGAGMENLIGIDT-LKSLDVSETPFGDDGL-IHVGKFKNLEKLNLWF 332
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
T++ + + +++L +++ L L+
Sbjct: 333 TKVTPDGLPH------------------------------------IKDLTNMKTLILDY 356
Query: 421 TQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
++D +L L ++L LSL+ N +T+ S+ L L L +SI + + G+
Sbjct: 357 QGITDDSLENLVGMQKLQTLSLKDNDMITNESIKYLKQLKGLKKISITFTQIDSRGVAEL 416
Query: 480 K 480
K
Sbjct: 417 K 417
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 28/290 (9%)
Query: 81 EWMAYLGAFRYLRSLNVADCR--RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
E M L RYL D R +T + + + M ++ L L + V D G+ HL
Sbjct: 149 ESMLQLPKLRYL------DLRYDDITDAGMEIVAKMPNMEVLRLEGAI-VGDEGLAHLTG 201
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+S L+ L + T +T G +++L NL L+ G +T + L LTK++ L+L +
Sbjct: 202 LSKLKFLNVRGTNVTDAGFKSIANLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRA 261
Query: 199 QVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNCTI--DSILE--- 248
QV + G LK +L L L A G+ L I +L+ L++S D ++
Sbjct: 262 QVKDDGFVHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSETPFGDDGLIHVGK 321
Query: 249 -GNENKAPL--AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
N K L K++ G I + ++T +L + +++ SL + +++ L
Sbjct: 322 FKNLEKLNLWFTKVTPDGLPHIKD---LTNMKTLILDYQGITDDSLENLVGMQKLQTLSL 378
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
D + MI ++S++ + + L+ ++++ T+ S GV L LP LE+
Sbjct: 379 KD--NDMITNESIKYLKQL-KGLKKISITFTQIDSRGVAELKKELPGLEV 425
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 158/364 (43%), Gaps = 80/364 (21%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
LS L+++ +L + G VTD + +L + L + +S+ G L LS L L
Sbjct: 79 LSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSVLQL 138
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
T N+SN +++S+L+ L K+ Y++
Sbjct: 139 RRT--------------NISNKSLESMLQ-------LPKLR--------------YLD-- 161
Query: 280 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
L + D++++ + + +M +E L L +++GD+ + + + + L+ LN+ T +
Sbjct: 162 -LRYDDITDAGME---IVAKMPNMEVLRLEGAIVGDEGLAHLTGL-SKLKFLNVRGTNVT 216
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK--GFI------ 391
AG +A +L NLE L +GT + + Y++ + +K +++ +K GF+
Sbjct: 217 DAGFKSIA-NLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEMK 275
Query: 392 ----------QQVGAETDLVLSLTALQNLN------------------HLERLNLEQTQV 423
+ GA + ++ + L++L+ +LE+LNL T+V
Sbjct: 276 QLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSETPFGDDGLIHVGKFKNLEKLNLWFTKV 335
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPP 482
+ L + + L L +TD SL L + KL LS++D ++TN + K
Sbjct: 336 TPDGLPHIKDLTNMKTLILDYQGITDDSLENLVGMQKLQTLSLKDNDMITNESIKYLKQL 395
Query: 483 RSLK 486
+ LK
Sbjct: 396 KGLK 399
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
L G +ER + S+ SF D LS+ +K ++ L + + + D +++
Sbjct: 49 LGGRLTKDERGVVTVADMSVASFSDEQLEPLSK------LKHVKILKVYGADVTDKTIDN 102
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
+ + +LR+ + +NT S AG+ L+ L +L +L L T I + ++ M +P L+++
Sbjct: 103 LLQM-KDLRDFSAANTTISDAGIEKLSA-LKDLSVLQLRRTNISNKSLESMLQLPKLRYL 160
Query: 381 DISNTDIKGFIQQVGA----------ETDLV--LSLTALQNLNHLERLNLEQTQVSDATL 428
D+ DI ++ A E +V L L L+ L+ LN+ T V+DA
Sbjct: 161 DLRYDDITDAGMEIVAKMPNMEVLRLEGAIVGDEGLAHLTGLSKLKFLNVRGTNVTDAGF 220
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 486
++ L L +LT + L+ L+K+ L + A + + G K + L+
Sbjct: 221 KSIANLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEMKQLQ 278
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 70 IELRGENSVDAEW--MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ +RG N DA + +A L L + A +T+ + L +T +K L+L R +
Sbjct: 208 LNVRGTNVTDAGFKSIANLTNLETLETNGTA----LTTEGMEYLAPLTKVKTLELMRA-Q 262
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
V D G HL + L+ L L +T + G+ L + L LD+ P D L +
Sbjct: 263 VKDDGFVHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSETPFGDDGLIHVGKF 322
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
LE L+LW ++V+ G +K + L L + G+T
Sbjct: 323 KNLEKLNLWFTKVTPDGLPHIKDLTNMKTLILDYQGIT 360
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L L H++ L + V+D T+ L K+L S N +++D + +LS+L L+
Sbjct: 76 LEPLSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSV 135
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 513
L +R ++N L S L+ LDL + DA ++ P +EV
Sbjct: 136 LQLRRTNISNKSLESMLQLPKLRYLDLR--YDDITDAGMEIVAKMPNMEV 183
>gi|168701675|ref|ZP_02733952.1| hypothetical protein GobsU_19277 [Gemmata obscuriglobus UQM 2246]
Length = 407
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
RVT + + AL + L LDLS + VTD G+K L ++ L L L T +T G+ L+
Sbjct: 101 RVTDAGVKALAALKALTTLDLSHTL-VTDEGLKELAALGALNTLGLGGTSVTDAGVKELA 159
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
+L+ L+ LDLG + VTD + L LT L L + + V++ G L L+ L LA
Sbjct: 160 ALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTDAGVKELAALKNLTHLELAA 219
Query: 222 TGVT 225
TGVT
Sbjct: 220 TGVT 223
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L LDL+ +VTDAG+K L ++ L L LS T +T +G+ L++L L+ L LGG V
Sbjct: 92 LTTLDLT-FTRVTDAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSV 150
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
TD ++ L L L LDL V++ GA L L+ L +++TGVT
Sbjct: 151 TDAGVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVT 199
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 20/197 (10%)
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-------GILAGHLPNL 353
+ + + LS + + D ++ +A + L L+LS T + AGV + A L L
Sbjct: 34 RPVTKVSLSFTRVTDTGLKELAAL-KGLTTLDLSYTEVTDAGVKALAALKALTALGLKGL 92
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
L L+ T++ D + ++ + +L +D+S+T + G L L L L
Sbjct: 93 TTLDLTFTRVTDAGVKALAALKALTTLDLSHT----LVTDEG--------LKELAALGAL 140
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
L L T V+DA + L+ K L L L + +TD +LS L+ LT L + +T+
Sbjct: 141 NTLGLGGTSVTDAGVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTD 200
Query: 474 SGLGSFKPPRSLKLLDL 490
+G+ ++L L+L
Sbjct: 201 AGVKELAALKNLTHLEL 217
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + L A L +L + VT + + L + L LDL + VTDAG K L
Sbjct: 126 VTDEGLKELAALGALNTLGLGGTS-VTDAGVKELAALKGLTALDLG-SMGVTDAGAKELS 183
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
++ L L +S TG+T G+ L++L+NL+ L+L VTD ++ L L L
Sbjct: 184 GLTGLTALGMSFTGVTDAGVKELAALKNLTHLELAATGVTDAGVKELAALKSL 236
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 37/213 (17%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGI--------ALLSSLQNLSVLDLGGLPVT 177
+VTD G+K L ++ L L LS T +T G+ L+ L+ LDL VT
Sbjct: 44 TRVTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLTTLDLTFTRVT 103
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 232
D +++L L L LDL + V++ G L L+ L L T GV +L +
Sbjct: 104 DAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSVTDAGVKELAALKG 163
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
L L+L + + A ++S L G T + +SF V+++ +
Sbjct: 164 LTALDLGSMGV--------TDAGAKELSGLTGLTALG------------MSFTGVTDAGV 203
Query: 292 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
L +K L HL+L+++ + D V+ +A +
Sbjct: 204 KE---LAALKNLTHLELAATGVTDAGVKELAAL 233
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT L L + L L L VTDAG+K L ++ L L L G+T G LS
Sbjct: 126 VTDEGLKELAALGALNTLGLG-GTSVTDAGVKELAALKGLTALDLGSMGVTDAGAKELSG 184
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L L+ L + VTD ++ L L L +L+L + V++ G
Sbjct: 185 LTGLTALGMSFTGVTDAGVKELAALKNLTHLELAATGVTDAG 226
>gi|406832962|ref|ZP_11092556.1| hypothetical protein SpalD1_15024 [Schlesneria paludicola DSM
18645]
Length = 236
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 292 SRFC--FLTQMKALEHL---DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
SRF FL +K L+ L DL + IGD ++ +A + NL L LSN + AG+ L
Sbjct: 58 SRFNGKFLHLVKGLDQLTSLDLRKTDIGDTHLKEIAEL-ENLTTLRLSNVPITDAGLIEL 116
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
L L L+GT+I D + +S+ SL+++D+S T I G + L
Sbjct: 117 RSQ-KKLSTLDLAGTRITDDGLKELSVHHSLRYLDLSETTITG------------MGLKD 163
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L L +L LNLE T+V+D L + FK LI ++LR S+TD
Sbjct: 164 LSGLPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSVTDAG 208
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW---LSETGLTADGIA 158
R L + G+ L LDL + TD G HL I+ LE L LS +T G+
Sbjct: 59 RFNGKFLHLVKGLDQLTSLDLRK----TDIGDTHLKEIAELENLTTLRLSNVPITDAGLI 114
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
L S + LS LDL G +TD L+ L V L YLDL + ++ G L P L LN
Sbjct: 115 ELRSQKKLSTLDLAGTRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSGLPNLLSLN 174
Query: 219 LAWTGVTKLPNISSLECLN 237
L T V N + LEC++
Sbjct: 175 LENTKV----NDTGLECVH 189
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 68 EAIE----LRGENSVDAEW-------MAYLGAFRY----------LRSLNVADCRR--VT 104
EAI+ LRGE +D + +++ G+ R+ L L D R+ +
Sbjct: 26 EAIKKIRLLRGEVRLDDKLPGTPVVSVSFYGSSRFNGKFLHLVKGLDQLTSLDLRKTDIG 85
Query: 105 SSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ 164
+ L + + L L LS V +TDAG+ L S L L L+ T +T DG+ LS
Sbjct: 86 DTHLKEIAELENLTTLRLSN-VPITDAGLIELRSQKKLSTLDLAGTRITDDGLKELSVHH 144
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+L LDL +T + L+ L L L L+L ++V++ G + F L +NL T V
Sbjct: 145 SLRYLDLSETTITGMGLKDLSGLPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSV 204
Query: 225 T 225
T
Sbjct: 205 T 205
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+T + L L L LDL+ ++TD G+K L +L L LSET +T G+ LS
Sbjct: 108 ITDAGLIELRSQKKLSTLDLA-GTRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSG 166
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L NL L+L V D L + L ++L + V++ G
Sbjct: 167 LPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSVTDAG 208
>gi|344170515|emb|CCA82933.1| leucine-rich-repeat type III effector protein (GALA5) [blood
disease bacterium R229]
Length = 533
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 150/376 (39%), Gaps = 57/376 (15%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L ELDLSRC +T AG+ HL + L +L + + + +G LL++ L+ LD+
Sbjct: 141 LTELDLSRCRGPITAAGIAHLSHLP-LVRLNVRDQRIGVEGARLLANHPTLTSLDVSNGR 199
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ R+L T+L L + +++ GA L L+ L+++ G+
Sbjct: 200 IGPEGARALAGNTRLTTLSVSHNRIGAEGAKALAASETLTSLDISENGI----------- 248
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
G+E LA + T +N + +E +
Sbjct: 249 -------------GDEGACALATNTK--LTALNVNRNRIGVEGA---------------K 278
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L
Sbjct: 279 ALAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTS 336
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L + I D ++ SL + I + I GA+ AL L
Sbjct: 337 LRIDSNNIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTT 384
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LNL + DA S LI LS+R L+D L++ LT L D + ++G
Sbjct: 385 LNLGYNGIGDAGAQAWSANTTLISLSVRRNGLSDAGATTLAASKTLTTLDAGDNTIRDAG 444
Query: 476 LGSFKPPRSLKLLDLH 491
+ R+L LD+
Sbjct: 445 ARALAANRTLTTLDVR 460
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + E L L +LNV + R+ AL L LD+ + D G++
Sbjct: 245 ENGIGDEGACALATNTKLTALNV-NRNRIGVEGAKALAAGEALTSLDIG-GNDIGDEGVR 302
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + + L L + T + ADG+ L++ + L+ L + + D R+L T L L
Sbjct: 303 ALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNNIGDAGARALATNTSLTTLH 362
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+ + +S GA L L+ LNL + G+
Sbjct: 363 IESNGISPAGAQALAANTTLTTLNLGYNGI 392
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 159/413 (38%), Gaps = 58/413 (14%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ A +A+L +R LNV D +R+ L L LD+S ++ G + L
Sbjct: 153 ITAAGIAHLSHLPLVR-LNVRD-QRIGVEGARLLANHPTLTSLDVSNG-RIGPEGARALA 209
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L L +S + A+G L++ + L+ LD+ + D +L TKL L++
Sbjct: 210 GNTRLTTLSVSHNRIGAEGAKALAASETLTSLDISENGIGDEGACALATNTKLTALNVNR 269
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+++ GA L L+ L++ + G+E LA
Sbjct: 270 NRIGVEGAKALAAGEALTSLDIGGNDI------------------------GDEGVRALA 305
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
N R L +E + + V L K L L + S+ IGD
Sbjct: 306 A---------NARLTTLNVERTRVGADGVG--------ALAASKTLTSLRIDSNNIGDAG 348
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 377
+A +L L++ + S AG LA + L L+L I D S +L
Sbjct: 349 ARALA-TNTSLTTLHIESNGISPAGAQALAANT-TLTTLNLGYNGIGDAGAQAWSANTTL 406
Query: 378 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 437
+ + + + GA T L S T L L+ + DA L+ + L
Sbjct: 407 ISLSVR----RNGLSDAGATT-LAASKT-------LTTLDAGDNTIRDAGARALAANRTL 454
Query: 438 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L +R+ + + L++ + L +L +R+ +T +G+ + R+L L +
Sbjct: 455 TTLDVRSNEIENAGARALAANTGLASLDLRNNRVTEAGVRALLANRTLSSLGV 507
>gi|46447142|ref|YP_008507.1| hypothetical protein pc1508 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400783|emb|CAF24232.1| hypothetical protein pc1508 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 657
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +A+ L G ++ +A+L L+ L++ DC +T + L L+ + L+ L+LS
Sbjct: 335 NLKALYLEGCKNLTDTGLAHLSPLVALQHLSLFDCENLTDAGLAYLSPLENLQHLNLSHS 394
Query: 126 VKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRS 183
T+AG+ HL ++ L+ L L LT DG+ LSSL L L L +TD L
Sbjct: 395 KHFTNAGLAHLSPLAALQHLNLFGCENLTGDGLTHLSSLVALQHLGLNFCRNLTDAGLAH 454
Query: 184 LQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L L L++LDL + +++ G A L L LNL W G+ L + +L+ L
Sbjct: 455 LAPLVTLQHLDLNFCDNLTDTGLAHLTSLVTLQHLNLGWCRNLTDAGLVHLSPLENLQHL 514
Query: 237 NLSNC 241
+L++C
Sbjct: 515 DLNDC 519
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL R+L L+ S LE +H ++L ++ +A+L L+ LN+
Sbjct: 488 HLNLGWCRNLTDAGLVHLSPLENLQH----LDLNDCYNLTDAGLAHLTPLVALQHLNLRR 543
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIA 158
CR++T + L LT + L+ LDL C +TDAG+ HL + L+ L+L LT G+A
Sbjct: 544 CRKLTDAGLAHLTPLVALQYLDLFGCRNLTDAGLTHLTPLIALQHLYLGLCNNLTDRGLA 603
Query: 159 LLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ 199
L+ L L LDL +T+ LR L L L+YLDL G +
Sbjct: 604 HLTPLAVLQRLDLSFCSNLTNAGLRHLSPLVALKYLDLSGCE 645
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
HL S +H L S L +H + L G ++ + + +L + L+ L +
Sbjct: 388 HLNLSHSKHFTNAGLAHLSPLAALQH----LNLFGCENLTGDGLTHLSSLVALQHLGLNF 443
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA 158
CR +T + L L + L+ LDL+ C +TD G+ HL S+ TL+ L L LT G+
Sbjct: 444 CRNLTDAGLAHLAPLVTLQHLDLNFCDNLTDTGLAHLTSLVTLQHLNLGWCRNLTDAGLV 503
Query: 159 LLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSF 216
LS L+NL LDL +TD L L L L++L+L ++++ G A L L +
Sbjct: 504 HLSPLENLQHLDLNDCYNLTDAGLAHLTPLVALQHLNLRRCRKLTDAGLAHLTPLVALQY 563
Query: 217 L------NLAWTGVTKLPNISSLECLNLSNCT 242
L NL G+T L + +L+ L L C
Sbjct: 564 LDLFGCRNLTDAGLTHLTPLIALQHLYLGLCN 595
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 179/413 (43%), Gaps = 80/413 (19%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET- 150
+ LN + +T + L L LK L L C +TD G+ HL + L+ L L +
Sbjct: 311 IEELNFSRNAYLTDAHLLVLKNCKNLKALYLEGCKNLTDTGLAHLSPLVALQHLSLFDCE 370
Query: 151 GLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
LT G+A LS L+NL L+L T+ L L L L++L+L+G +
Sbjct: 371 NLTDAGLAYLSPLENLQHLNLSHSKHFTNAGLAHLSPLAALQHLNLFGCE---------- 420
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
NL G+T L ++ +L+ L L+ C N A LA ++
Sbjct: 421 --------NLTGDGLTHLSSLVALQHLGLNFCR-------NLTDAGLAHLA--------- 456
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
+ ++ L+F D N + + LT + L+HL+L R
Sbjct: 457 --PLVTLQHLDLNFCD--NLTDTGLAHLTSLVTLQHLNLGWC-----------------R 495
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIK 388
NL + AG+ L+ L NL+ L L+ + D +++++ + +L+ +++
Sbjct: 496 NL-------TDAGLVHLSP-LENLQHLDLNDCYNLTDAGLAHLTPLVALQHLNL------ 541
Query: 389 GFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NAS 446
++ TD L+ LT L L +L+ ++DA L L+ L HL L +
Sbjct: 542 ---RRCRKLTDAGLAHLTPLVALQYLDLFGCRN--LTDAGLTHLTPLIALQHLYLGLCNN 596
Query: 447 LTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
LTD L L+ L+ L L + + LTN+GL P +LK LDL G LT+
Sbjct: 597 LTDRGLAHLTPLAVLQRLDLSFCSNLTNAGLRHLSPLVALKYLDLSGCENLTD 649
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
N++ +A+L L+ L+++ C +T++ L L+ + LK LDLS C +TDAG
Sbjct: 595 NNLTDRGLAHLTPLAVLQRLDLSFCSNLTNAGLRHLSPLVALKYLDLSGCENLTDAG 651
>gi|449132603|ref|ZP_21768618.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448888282|gb|EMB18604.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 455
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 162/392 (41%), Gaps = 67/392 (17%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DAGM++L S++ LE+L LS+T +T I + L VL L VTD L L L
Sbjct: 120 IDDAGMENLTSLTKLERLILSDTAITDRTIETAGKMNTLEVLFLRRTGVTDEGLELLTGL 179
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 247
+KL +DL + + + G L L+ + L + VT
Sbjct: 180 SKLRAIDLRNTNIGDAGMDPLAKIKTLADVQLEKSKVT---------------------- 217
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
+E LA + L +IN F Y T ++ ++ L Q LE L
Sbjct: 218 --DEGLVKLAPLPLK---YIN----FNYCTT-------INGPTMK---MLGQTPTLERLQ 258
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
S I D S+ + + + L +L + + G+ +A + L L + +DD
Sbjct: 259 GDYSKINDASMAELKGL-SKLTHLRIRGCDVTGEGIKHIANN-KALAKFELRDSSVDDKG 316
Query: 368 ISYMSMMPSLKFIDISNTDI---KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
+ +S +P++ +DIS + +G Q L L L L L +T+ +
Sbjct: 317 LEVISQLPAVTHVDISECRLASPEGIAQ--------------LGKLTGLTYLGLWETKTN 362
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKP 481
DATL L L+L++ S+TD SL L ++KL L++ L + L
Sbjct: 363 DATLEAFGELVNLEELNLKSTSVTDQSLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPN 422
Query: 482 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 513
+S+ + + G+ D I + HP ++V
Sbjct: 423 LKSMNVANTSIGF----DVIDTLAENHPDLQV 450
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 149/323 (46%), Gaps = 42/323 (13%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ + + LT +T L+ L LS +TD ++ ++TLE L+L TG+T +G+ LL+
Sbjct: 120 IDDAGMENLTSLTKLERLILSDTA-ITDRTIETAGKMNTLEVLFLRRTGVTDEGLELLTG 178
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW- 221
L L +DL + D + L + L + L S+V++ G L P L ++N +
Sbjct: 179 LSKLRAIDLRNTNIGDAGMDPLAKIKTLADVQLEKSKVTDEGLVKLAPLP-LKYINFNYC 237
Query: 222 -----------------------------TGVTKLPNISSLECLNLSNCTI--DSILEGN 250
+ +L +S L L + C + + I
Sbjct: 238 TTINGPTMKMLGQTPTLERLQGDYSKINDASMAELKGLSKLTHLRIRGCDVTGEGIKHIA 297
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEHLD 307
NKA LAK L ++ ++++ + + ++ +D+S L+ L ++ L +L
Sbjct: 298 NNKA-LAKFELRDSS-VDDKGLEVISQLPAVTHVDISECRLASPEGIAQLGKLTGLTYLG 355
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
L + D ++E + NL LNL +T + + +L + L+ L+++GTQ+ D +
Sbjct: 356 LWETKTNDATLEAFGEL-VNLEELNLKSTSVTDQSLPVLM-KMTKLKTLNVAGTQLGDDS 413
Query: 368 ISYMSMMPSLKFIDISNTDIKGF 390
++ +P+LK ++++NT I GF
Sbjct: 414 FLELAKLPNLKSMNVANTSI-GF 435
>gi|384252153|gb|EIE25630.1| hypothetical protein COCSUDRAFT_83637 [Coccomyxa subellipsoidea
C-169]
Length = 433
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 172/381 (45%), Gaps = 45/381 (11%)
Query: 27 WRRQ-RRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAY 85
WR R+++RL A L+H + FP L +F E + + E +A
Sbjct: 40 WREAFGRTVQRLEPQGA---LQHPVCLAERFPELQALFMDGCEGVNMTNEQVTEA----- 91
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G RYL++L++A CR T L L + L++L LS+C +T + L + S+L L
Sbjct: 92 -GRLRYLKTLSLAGCRACTDKGLAGLAVIEGLQKLSLSKCNALTSRTLDLLQTSSSLISL 150
Query: 146 WLSETGLTAD-GIALL---SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQV 200
L + D +ALL +SL+ LS+ D + +T+ ++S+ L +E L+L G ++
Sbjct: 151 DLGQCAWVDDSSMALLCNSASLKQLSLADC--VRLTNRGVQSVAKLKCIEALNLSGLREI 208
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN-LSNCTIDSILEGNENKAPLAKI 259
+ G L L LNL G + ++ L L+ LS C I + +
Sbjct: 209 DDAGVEALAAVTSLRELNLDRCGQVRGLTLAKLGGLHKLSMCDCPCIADDSLG------- 261
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMIGD-DS 317
L+G T + + + LD+ + + L M ALE LDL D ++
Sbjct: 262 CLSGVTSLEDLK------------LDMCDKITDKGAGALASMSALEDLDLHRCERLDCEA 309
Query: 318 VEMVACVGANLRNLNLSNTRFSSA-GVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMP 375
+ ++ +G LR+L LS + A G+G LA P L L L+G I D + ++ M
Sbjct: 310 MRRLSALG-QLRSLRLSGCVYIKAEGLGHLARGCPLLSRLDLAGCVGIKDEGMQALAEMQ 368
Query: 376 SLKFIDISNTDIKGFIQQVGA 396
L+ ++I+ ++ GA
Sbjct: 369 HLQALNINQCK---YVSDAGA 386
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCV 126
E ++L +D E M L A LRSL ++ C + + L L G L LDL+ CV
Sbjct: 295 EDLDLHRCERLDCEAMRRLSALGQLRSLRLSGCVYIKAEGLGHLARGCPLLSRLDLAGCV 354
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSS 162
+ D GM+ L + L+ L +++ +D G A+L++
Sbjct: 355 GIKDEGMQALAEMQHLQALNINQCKYVSDAGAAVLAT 391
>gi|255017603|ref|ZP_05289729.1| hypothetical protein LmonF_07220 [Listeria monocytogenes FSL
F2-515]
Length = 419
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 53 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 107
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 108 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 141
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 142 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 197
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 198 KEFYAQNNSISDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 255
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++A +G NL +L N F+ G LPNLE L +S
Sbjct: 256 VIHDLPSLETFNAQTNLIANIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDN 315
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 316 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNN 367
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 368 VYIDD-ISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 404
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 32/304 (10%)
Query: 206 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 260
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 56 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 113
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D V
Sbjct: 114 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSD--VST 168
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
+ + L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 169 LTNFPS-LNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 222
Query: 381 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 223 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLIAN-----IG 277
Query: 433 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
T L L+ N S + SL + L L L + D LG+ L++LDL
Sbjct: 278 TMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 337
Query: 492 GGWL 495
+L
Sbjct: 338 NNYL 341
>gi|406833864|ref|ZP_11093458.1| hypothetical protein SpalD1_19557 [Schlesneria paludicola DSM
18645]
Length = 310
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 8/166 (4%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
DAE + + + LRS+NV +VT L L M L+ L LS K+TDAG++HLL
Sbjct: 123 DAE-LKLMAGLKSLRSINVV-LSQVTDDGLKELESMDRLESLALS-STKITDAGLRHLLR 179
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ L +L L++T ++ +G+ +SSL +LS+LDL G +TD L+SL++L KLEYLDL G+
Sbjct: 180 LKKLSRLQLAQTAVSDEGLKTISSLHSLSLLDLYGTRITDQGLKSLELLRKLEYLDLGGT 239
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 239
+SN G A L + P L + + T G+ +L +ISSL L L+
Sbjct: 240 AISNAGLAHLGVLPNLVTVGVRGTQIGDSGLEQLTSISSLRYLYLN 285
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++TD G+K L + LE L L T ++ G+A L L NL + + G + D L L
Sbjct: 216 RITDQGLKSLELLRKLEYLDLGGTAISNAGLAHLGVLPNLVTVGVRGTQIGDSGLEQLTS 275
Query: 187 LTKLEYLDLWGSQVSNRGAA 206
++ L YL L +Q + G A
Sbjct: 276 ISSLRYLYLNMAQTTKEGRA 295
>gi|290999671|ref|XP_002682403.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284096030|gb|EFC49659.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 403
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 157/401 (39%), Gaps = 92/401 (22%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
R+L+++ +T L M L +L + RC + G+K++ + L KL +
Sbjct: 85 RFLQNIATLKVGVITRDTYRKLILMKSLTKL-IIRCDD--EEGVKYISELKQLTKLTIYG 141
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ + +G+ +S L+ L+ L + +++ + L+ L +L L ++ ++V N G+ +
Sbjct: 142 SHIGDEGVRYISELKQLTYLSIPSNGISEYGAKHLRELKQLTTLIIFCNRVGNEGSKYIS 201
Query: 210 MFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 264
+L+ L ++ G L ++ L CL++S+ + G+E ++K+ T
Sbjct: 202 ELKQLTTLSIDENDIGAEGAKYLSELTQLTCLDISSNWL-----GDEGAKYVSKMKQLTT 256
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
IN + N F++ + L++LD+ + IGD+ +E
Sbjct: 257 LHINSNR--------------IGNEGSK---FISSLNQLKNLDICKNDIGDEGLEYF--- 296
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
G L L+ L LS +I D Y+S + L ++DI
Sbjct: 297 -----------------------GQLAQLKSLDLSYNRIGDEGAQYLSELKQLIYLDIKT 333
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
NHL D P+ K+LI+L + N
Sbjct: 334 --------------------------NHL----------GDKGAMPIGELKKLIYLYINN 357
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 485
+ + +S L +LT L IR+ +T G F + L
Sbjct: 358 NKIRNEGAKYISELKQLTKLDIRNNFITEEGTKYFTEMKQL 398
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 133/293 (45%), Gaps = 21/293 (7%)
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
++ + L +L L ++GS + + G + +L++L++ G+++ E L+
Sbjct: 125 VKYISELKQLTKLTIYGSHIGDEGVRYISELKQLTYLSIPSNGISEYGAKHLRELKQLTT 184
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINER----EAFLYI-ETSLLSFLDVSNSSLSRFC 295
I GNE ++++ T I+E E Y+ E + L+ LD+S++ L
Sbjct: 185 LIIFCNRVGNEGSKYISELKQLTTLSIDENDIGAEGAKYLSELTQLTCLDISSNWLGDEG 244
Query: 296 --FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
++++MK L L ++S+ IG++ + ++ + L+NL++ G+ G L L
Sbjct: 245 AKYVSKMKQLTTLHINSNRIGNEGSKFISSLNQ-LKNLDICKNDIGDEGLEYF-GQLAQL 302
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
+ L LS +I D Y+S + L ++DI + GA + L L
Sbjct: 303 KSLDLSYNRIGDEGAQYLSELKQLIYLDIKTN----HLGDKGA--------MPIGELKKL 350
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L + ++ + +S K+L L +RN +T+ + + +L +L+I
Sbjct: 351 IYLYINNNKIRNEGAKYISELKQLTKLDIRNNFITEEGTKYFTEMKQLIDLTI 403
>gi|59802548|gb|AAX07514.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 250
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 87/171 (50%), Gaps = 8/171 (4%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
DA+ + L + L LN+ +VT + L L+ +T L L L + KVTDAG+K L
Sbjct: 32 TDAD-LKELAPLKNLTQLNLC-LTKVTDAGLKELSPLTKLTHLCLMQ-TKVTDAGLKELA 88
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L T +T G+ L+ L NL+VL LG VTD L+ L L L L+L
Sbjct: 89 PLTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGE 148
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
+Q++ G L F +L+ L+L+ T GV L + L LNL +
Sbjct: 149 TQITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNLGGTLV 199
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L +K L L+L + + D ++ ++ + L +L L T+ + AG+ LA L NL L
Sbjct: 39 LAPLKNLTQLNLCLTKVTDAGLKELSPL-TKLTHLCLMQTKVTDAGLKELA-PLTNLTTL 96
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
L TQ+ D + ++ + +L + + +T + TD L L L L L
Sbjct: 97 ELGSTQVTDAGLKELAPLTNLTVLTLGSTQV----------TDA--GLKELAPLKSLTLL 144
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
L +TQ+++A + L+ F +L L L +TD + L+ +KLT L++ ++T++ L
Sbjct: 145 ELGETQITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNLGGTLVTDTCL 204
Query: 477 GSFKPPRSLKLLDL 490
P ++L L L
Sbjct: 205 KDLAPLKNLAFLSL 218
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL LNL T+ + AG+ L+ L L L L T++ D + ++ + +L +++ +T
Sbjct: 44 NLTQLNLCLTKVTDAGLKELS-PLTKLTHLCLMQTKVTDAGLKELAPLTNLTTLELGSTQ 102
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ TD L L L +L L L TQV+DA L L+ K L L L
Sbjct: 103 V----------TDA--GLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGETQ 150
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
+T+ + +L+ +KLT L + +T++G+ P L L+L GG L+T+
Sbjct: 151 ITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNL-GGTLVTD 201
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
L L L L L L QT+V+DA L L+ L L L + +TD L +L+ L+ LT
Sbjct: 59 GLKELSPLTKLTHLCLMQTKVTDAGLKELAPLTNLTTLELGSTQVTDAGLKELAPLTNLT 118
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 505
L++ +T++GL P +SL LL+L G +TE I +
Sbjct: 119 VLTLGSTQVTDAGLKELAPLKSLTLLEL-GETQITEAGIKELA 160
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L L +L +LNL T+V+DA L LS +L HL L +TD L +L+ L+ LT
Sbjct: 36 LKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAPLTNLTT 95
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L + +T++GL P +L +L L
Sbjct: 96 LELGSTQVTDAGLKELAPLTNLTVLTL 122
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 481
+V+DA L L+ K L L+L +TD L +LS L+KLT+L + +T++GL P
Sbjct: 30 KVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAP 89
Query: 482 PRSLKLLDL 490
+L L+L
Sbjct: 90 LTNLTTLEL 98
>gi|149173875|ref|ZP_01852504.1| hypothetical protein PM8797T_05540 [Planctomyces maris DSM 8797]
gi|148847405|gb|EDL61739.1| hypothetical protein PM8797T_05540 [Planctomyces maris DSM 8797]
Length = 525
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 196/466 (42%), Gaps = 67/466 (14%)
Query: 26 KWRRQRRS------LERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVD 79
+W+R + L+RLP LAD L + L EV + + LRG +++
Sbjct: 60 RWKRNQHGQVYWLFLKRLP--LADDDLT-------VLKELPEV-----QTLTLRGVHTIK 105
Query: 80 A-----EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ + Y+G + LR L+++ ++T + + L + L+ LDLS C + TDA K
Sbjct: 106 GNHFTDDGLRYVGQLKKLRYLDLSVNYQLTDAGMRHLESLKQLEHLDLSGCRRFTDASGK 165
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG-----------LPVTDLVLRS 183
L +++L L L +T LT D + LS L L L + +P+ + L
Sbjct: 166 SLAQLTSLRTLKLRQTSLTPDVLTALSQLPELKHLAVKYSKGMWLNENTIVPLEKMPLEE 225
Query: 184 LQ-VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
L+ +L K E L L S LK P ++ ++ L +I ++ LN+
Sbjct: 226 LEGMLIKDENLPLIAQMKS------LKSLPFEQDRSIKDDQLSYLTHIRQIKKLNI---- 275
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQMK 301
+ G + + L ++ +A +ET +S + L R L K
Sbjct: 276 --VLTRGTSDTSQLIQL-----------QALPELETLSISLGNSTEGDPLDRSGLLALAK 322
Query: 302 ALEHLDLSSSMIGDDSVEMVA-CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+L ++ +E ++ C NLN+ ++F + L + L+ L++
Sbjct: 323 IPALKELGIGLVNVPILEAISHCTQVQKLNLNVDTSQFQPTDLAYLK-EMSRLKDLTVQI 381
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+ D + + + SL+ I + G+ Q + SL LQNL L+ L+L
Sbjct: 382 ALVSDDLWATLGQVKSLEEISFN----WGWPPQKEPPPFSMTSLKQLQNLPRLKGLDLNG 437
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
V+D L L + L L L NA +T+ L QL LS+L LS
Sbjct: 438 FPVTDEGLGYLGQCRTLERLGLNNAPITNAGLLQLRHLSQLKKLSF 483
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 161/406 (39%), Gaps = 78/406 (19%)
Query: 152 LTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLK 209
T DG+ + L+ L LDL +TD +R L+ L +LE+LDL G + ++ L
Sbjct: 109 FTDDGLRYVGQLKKLRYLDLSVNYQLTDAGMRHLESLKQLEHLDLSGCRRFTDASGKSLA 168
Query: 210 MFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTF 266
L L L T +T L +S L L + NEN PL K+ L
Sbjct: 169 QLTSLRTLKLRQTSLTPDVLTALSQLPELKHLAVKYSKGMWLNENTIVPLEKMPL----- 223
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVG 325
E E L + +L + QMK+L+ L I DD + + +
Sbjct: 224 -EELEGMLIKDENL--------------PLIAQMKSLKSLPFEQDRSIKDDQLSYLTHI- 267
Query: 326 ANLRNLNLSNTRFSSAGVGILA-GHLPNLEILSLS------GTQIDDYAISYMSMMPSLK 378
++ LN+ TR +S ++ LP LE LS+S G +D + ++ +P+LK
Sbjct: 268 RQIKKLNIVLTRGTSDTSQLIQLQALPELETLSISLGNSTEGDPLDRSGLLALAKIPALK 327
Query: 379 FIDISNTDIKGF--------IQQVGAETDL----VLSLTALQNLNHLERLNLEQTQVSD- 425
+ I ++ +Q++ D L L+ ++ L+ L ++ VSD
Sbjct: 328 ELGIGLVNVPILEAISHCTQVQKLNLNVDTSQFQPTDLAYLKEMSRLKDLTVQIALVSDD 387
Query: 426 --ATL-----------------------FPLSTFKELIHLS------LRNASLTDVSLHQ 454
ATL F +++ K+L +L L +TD L
Sbjct: 388 LWATLGQVKSLEEISFNWGWPPQKEPPPFSMTSLKQLQNLPRLKGLDLNGFPVTDEGLGY 447
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
L L L + +A +TN+GL + LK L +G + E A
Sbjct: 448 LGQCRTLERLGLNNAPITNAGLLQLRHLSQLKKLSFYGSKIDREPA 493
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLS-------RCVKVTDAGMK 134
+AYL L+ L V + S LWA G + L+E+ + + +K
Sbjct: 365 LAYLKEMSRLKDLTVQIA--LVSDDLWATLGQVKSLEEISFNWGWPPQKEPPPFSMTSLK 422
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L ++ L+ L L+ +T +G+ L + L L L P+T+ L L+ L++L+ L
Sbjct: 423 QLQNLPRLKGLDLNGFPVTDEGLGYLGQCRTLERLGLNNAPITNAGLLQLRHLSQLKKLS 482
Query: 195 LWGSQVSNRGAAVLKMF 211
+GS++ A L F
Sbjct: 483 FYGSKIDREPAEELHQF 499
>gi|254417119|ref|ZP_05030865.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176097|gb|EDX71115.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 176/375 (46%), Gaps = 73/375 (19%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR N+ D R L+G+T L+ L L + ++D + L+ ++ L+K+ LS
Sbjct: 80 LRIQNITDIR--------PLSGLTNLRTLYLGSNL-ISD--VSPLVELTNLKKVDLSHNQ 128
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+T + LS L NL LDL +T++ L LT LE+LDL +Q++N + L
Sbjct: 129 IT--NVNPLSGLTNLEWLDLSRNQITNV--NPLSELTNLEWLDLGHNQITN--ISPLSGL 182
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE--NKAPLAKISLAGTTFINE 269
L FLNL+ +T IS+L +NL D L N+ + PLA
Sbjct: 183 TNLEFLNLSHNQITNFRIISAL--INLK----DIALNNNQITDIYPLA------------ 224
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
E + L + ++N+ ++ L Q+ LE L + ++ I D + ++ + NLR
Sbjct: 225 -------ELTNLRRISLNNNQITTVRPLVQLTNLESLYIGNNQITD--IRPLSQL-TNLR 274
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
L L++ + + L NL L+LS QI D + +S + +L++I ++ I
Sbjct: 275 QLALNHNQITDIRP---LSQLTNLTGLALSHNQITD--VRPLSQLTNLEWIHLNYNQIT- 328
Query: 390 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
++T L NLN+L L+L QV++ T PL K L + LR +TD
Sbjct: 329 -------------NITPLVNLNNLTGLDLHSNQVTNVT--PLVQLKNLKWIDLRFNQITD 373
Query: 450 VSLHQLSSLSKLTNL 464
+ SSLS LTNL
Sbjct: 374 I-----SSLSGLTNL 383
>gi|300691489|ref|YP_003752484.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078549|emb|CBJ51205.2| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum PSI07]
Length = 533
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 150/376 (39%), Gaps = 57/376 (15%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L ELDLSRC +T AG+ HL + L +L + + + +G LL++ L+ LD+
Sbjct: 141 LTELDLSRCRGPITAAGIAHLSHLP-LVRLNVRDQRIGVEGARLLANHPTLTSLDVSNGR 199
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ R+L T+L L + +++ GA L L+ L+++ G+
Sbjct: 200 IGPEGARALADNTRLTTLSVSHNRIGAEGAKALAASETLTSLDISENGI----------- 248
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
G+E LA + T +N + +E +
Sbjct: 249 -------------GDEGACALATNTKLTTLNVNRNR--IGVEGA---------------K 278
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L
Sbjct: 279 ALAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTS 336
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L + I D ++ SL + I + I GA+ AL L
Sbjct: 337 LRIDSNNIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTT 384
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LNL + DA S LI LS+R L+D L++ +T L D + ++G
Sbjct: 385 LNLGYNGIGDAGAQAWSANTTLISLSVRRNGLSDAGATILAASKTMTTLDAGDNTIRDAG 444
Query: 476 LGSFKPPRSLKLLDLH 491
+ R+L LD+
Sbjct: 445 ARALAANRTLTTLDVR 460
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN + E L L +LNV + R+ AL L LD+ + D G++
Sbjct: 245 ENGIGDEGACALATNTKLTTLNV-NRNRIGVEGAKALAAGEALTSLDIG-GNDIGDEGVR 302
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + + L L + T + ADG+ L++ + L+ L + + D R+L T L L
Sbjct: 303 ALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNNIGDAGARALATNTSLTTLH 362
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+ + +S GA L L+ LNL + G+
Sbjct: 363 IESNGISPAGAQALAANTTLTTLNLGYNGI 392
>gi|290984372|ref|XP_002674901.1| predicted protein [Naegleria gruberi]
gi|284088494|gb|EFC42157.1| predicted protein [Naegleria gruberi]
Length = 599
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 180/422 (42%), Gaps = 52/422 (12%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + + L L+V D + S + +L M L L++ + D G
Sbjct: 204 NMIGNEGIELISRMEQLTDLDVMD-NNIRSEGVKSLCKMKHLTNLNIGN-NPIEDEGAIL 261
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL--PVTDLVLRSLQVLTKLEYL 193
L + L+ L + + G + LS+L NL L + GL TD + R + LT+LE+
Sbjct: 262 LGEMKQLKNLITACNNIGMKGFSSLSTLLNLESLVILGLDGKSTDFI-REMNQLTRLEF- 319
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSILE 248
+GS + +G + L+FL N+A + + L LN+ +C I+ +
Sbjct: 320 --YGSNLEPKGFDPISHLSNLTFLTIRGRNIADGDLECIGQFKKLTTLNVPSCNIN---Q 374
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 308
G ++ L L+FLD+S + + +T +K+L LD+
Sbjct: 375 GFKSICGLKN----------------------LTFLDLSYNKIESVESITNLKSLTQLDI 412
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ + IG + + ++ + NL NL + + G+ L+ + L L ++ QI
Sbjct: 413 NGNRIGHEGAKSISQL-DNLTNLQIGHNLIQDEGIKYLS-TMQCLTTLGVAENQISIEGA 470
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
++S L +D++N I+ GA+ L LN+L L + ++ D
Sbjct: 471 KFISKSHQLTSLDLTNN----VIETEGAKI--------LSELNNLTGLFVYGNRIRDEGA 518
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
+ST ++L L + +TD +S+L +L+ L I + + G S + L +L
Sbjct: 519 KYISTMQQLTILDIAYNEITDEGAKAISNLDQLSTLYIYSNEICDEGAKSICGMKQLTIL 578
Query: 489 DL 490
D+
Sbjct: 579 DI 580
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E + YL + L +L VA+ +++ ++ L LDL+ V T+ G
Sbjct: 437 GHNLIQDEGIKYLSTMQCLTTLGVAE-NQISIEGAKFISKSHQLTSLDLTNNVIETE-GA 494
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K L ++ L L++ + +G +S++Q L++LD+ +TD +++ L +L L
Sbjct: 495 KILSELNNLTGLFVYGNRIRDEGAKYISTMQQLTILDIAYNEITDEGAKAISNLDQLSTL 554
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
++ +++ + GA + +L+ L++ +
Sbjct: 555 YIYSNEICDEGAKSICGMKQLTILDIDYN 583
>gi|281210637|gb|EFA84803.1| hypothetical protein PPL_01796 [Polysphondylium pallidum PN500]
Length = 739
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 156/367 (42%), Gaps = 56/367 (15%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L+ M L+++ L C TD GM++ + L L L++ +T + L + L L
Sbjct: 360 LSRMYHLQKVSLVACFGFTDLGMENFKRMEHLTSLILTDCAVTNVSVKSLKQMVKLEELS 419
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA-VLKMFPRLSFLNLAWTGV----- 224
L +TD L L L +L++LDL +++ G + F +L LNL+ T V
Sbjct: 420 LRNTKITDSGLTLLSSLVELKFLDLSACNITDEGITFAIPCFTKLETLNLSATSVTEKAI 479
Query: 225 ---TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT------FINEREAFLY 275
TKLP +S L LSNC + GN++ L I+L G T F + +
Sbjct: 480 QKLTKLPLVS----LYLSNCP----MIGNQS---LFFITLFGKTLKLLDIFGTKIGGAGF 528
Query: 276 IETSLLSFLDV----SNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN-- 327
+ L L V SLS L ++ + LDLS D + + N
Sbjct: 529 VNLQRLPNLTVLKLPGRDSLSDAHISHLNALQNVRRLDLS------DYINITTIAPLNPL 582
Query: 328 --LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
L L+LSNT+ S + + G NL IL+L T++ D +S + + SL + + T
Sbjct: 583 RYLCELSLSNTKISDDSIDSIIG-CSNLVILNLDRTRVRDIGVSKLISL-SLHTLSLMAT 640
Query: 386 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
I+G LT L L L LN+ + DA + PL L ++ LRN
Sbjct: 641 GIRGD------------CLTTLSQLITLTSLNISSNDIQDAKVLPLLDLPNLTYIDLRNT 688
Query: 446 SLTDVSL 452
SL
Sbjct: 689 QAFTASL 695
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 67/316 (21%)
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
G T G+ +++L+ L L VT++ ++SL+ + KLE L L +++++ G +L
Sbjct: 376 GFTDLGMENFKRMEHLTSLILTDCAVTNVSVKSLKQMVKLEELSLRNTKITDSGLTLLSS 435
Query: 211 FPRLSFLNLAWTGVTK------LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 264
L FL+L+ +T +P + LE LNLS ++ K PL + L+
Sbjct: 436 LVELKFLDLSACNITDEGITFAIPCFTKLETLNLSATSVTEKAIQKLTKLPLVSLYLS-- 493
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+ MIG+ S+ +
Sbjct: 494 --------------------------------------------NCPMIGNQSLFFITLF 509
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS 383
G L+ L++ T+ AG L LPNL +L L G + D IS+++ + +++ +D+S
Sbjct: 510 GKTLKLLDIFGTKIGGAGFVNLQ-RLPNLTVLKLPGRDSLSDAHISHLNALQNVRRLDLS 568
Query: 384 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
+ +I + ++ L L +L L+L T++SD ++ + L+ L+L
Sbjct: 569 D-----YIN--------ITTIAPLNPLRYLCELSLSNTKISDDSIDSIIGCSNLVILNLD 615
Query: 444 NASLTDVSLHQLSSLS 459
+ D+ + +L SLS
Sbjct: 616 RTRVRDIGVSKLISLS 631
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-LEKLWLSETGLTADGIALL 160
++T S L L+ + LK LDLS C +TD G+ + T LE L LS T +T I L
Sbjct: 424 KITDSGLTLLSSLVELKFLDLSAC-NITDEGITFAIPCFTKLETLNLSATSVTEKAIQKL 482
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLT----KLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ L +S L L P+ + +SL +T L+ LD++G+++ G L+ P L+
Sbjct: 483 TKLPLVS-LYLSNCPM--IGNQSLFFITLFGKTLKLLDIFGTKIGGAGFVNLQRLPNLTV 539
Query: 217 LNLAWTGVTKLPNISSLECL 236
L L +IS L L
Sbjct: 540 LKLPGRDSLSDAHISHLNAL 559
>gi|290974856|ref|XP_002670160.1| predicted protein [Naegleria gruberi]
gi|284083716|gb|EFC37416.1| predicted protein [Naegleria gruberi]
Length = 376
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 157/334 (47%), Gaps = 41/334 (12%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+G + L L+ +C + + + + M L +L++ R ++ + G K++ + L +L
Sbjct: 55 IGLMKGLTVLSAENC--IGTEGVKHICKMNNLTKLNIER-NEIGEEGAKYISKMKQLTEL 111
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ G+ +G+ +S L+NL++L++ + D +S+ L +L +L++ + +SN G+
Sbjct: 112 NVGWNGIGKEGVEFISELKNLTLLEIEACRICDEGAKSISELKQLTHLNISYNNISNLGS 171
Query: 206 AVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
L +L+ L N++ G + ++ L L++SN I
Sbjct: 172 KYLTELKQLTVLTLCDCNISEEGCKYISELNQLTDLDISN----------------NDIG 215
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
G +I+ + L++ ++ +N + +++MK + +L++S + +GD+ +
Sbjct: 216 CNGVEYISGMKQLLFL------YIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEGAKY 269
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
++ + L L + + S+ G ++ L L L++ I +S M L+ +
Sbjct: 270 ISDM-KQLTKLEVVRSDISTEGAKHIS-ELKQLTDLNIGENNIGGEGAIAISKMNQLRIL 327
Query: 381 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 414
DIS+ +I G +GAE ++ ++ L HL+
Sbjct: 328 DISDNNIGG----IGAE-----HVSQMKQLTHLD 352
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F++++K L L++ + I D+ + ++ + L +LN+S S+ G L L L +
Sbjct: 125 FISELKNLTLLEIEACRICDEGAKSISEL-KQLTHLNISYNNISNLGSKYLT-ELKQLTV 182
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSL-------TA 406
L+L I + Y+S + L +DISN DI G G + L L + T
Sbjct: 183 LTLCDCNISEEGCKYISELNQLTDLDISNNDIGCNGVEYISGMKQLLFLYIYGTNMYPTE 242
Query: 407 LQNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
LQ ++ +++ LN+ V D +S K+L L + + ++ +S L +LT+
Sbjct: 243 LQKISEMKQVTNLNISWNYVGDEGAKYISDMKQLTKLEVVRSDISTEGAKHISELKQLTD 302
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L+I + + G + L++LD+
Sbjct: 303 LNIGENNIGGEGAIAISKMNQLRILDI 329
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E + ++ + L L + CR + +++ + L L++S +++ G
Sbjct: 114 GWNGIGKEGVEFISELKNLTLLEIEACR-ICDEGAKSISELKQLTHLNISY-NNISNLGS 171
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K+L + L L L + ++ +G +S L L+ LD+ + + + + +L +L
Sbjct: 172 KYLTELKQLTVLTLCDCNISEEGCKYISELNQLTDLDISNNDIGCNGVEYISGMKQLLFL 231
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE 248
++G+ + + +++ LN++W G + ++ L L + I + E
Sbjct: 232 YIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEGAKYISDMKQLTKLEVVRSDIST--E 289
Query: 249 GNENKAPLAKIS--LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALE 304
G ++ + L +++ G I A + + L LD+S++++ ++QMK L
Sbjct: 290 GAKHISELKQLTDLNIGENNIGGEGAIAISKMNQLRILDISDNNIGGIGAEHVSQMKQLT 349
Query: 305 HLDLSSSMIGD 315
HLD+S + IG+
Sbjct: 350 HLDISHNCIGN 360
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
++++MK L L++ + IG + VE ++ + NL L + R G ++ L L
Sbjct: 101 YISKMKQLTELNVGWNGIGKEGVEFISEL-KNLTLLEIEACRICDEGAKSIS-ELKQLTH 158
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L++S I + Y++ + L + + + +I + G + + LN L
Sbjct: 159 LNISYNNISNLGSKYLTELKQLTVLTLCDCNI----SEEGCK--------YISELNQLTD 206
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
L++ + + +S K+L+ L + ++ L ++S + ++TNL+I + + G
Sbjct: 207 LDISNNDIGCNGVEYISGMKQLLFLYIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEG 266
Query: 476 LGSFKPPRSLKLLDLHGGWLLTEDA 500
+ L L++ + TE A
Sbjct: 267 AKYISDMKQLTKLEVVRSDISTEGA 291
>gi|290979019|ref|XP_002672232.1| predicted protein [Naegleria gruberi]
gi|284085807|gb|EFC39488.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 163/406 (40%), Gaps = 94/406 (23%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E Y+G + L+ L++A+ + G KH
Sbjct: 91 NYIGVEGAKYIGEMKQLKQLHIANNN--------------------------IGPEGAKH 124
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + +T DG +S ++ L+VL++ G + D + + + +L LD+
Sbjct: 125 ISGLEQLTILNIRANEITVDGAKFISEMKQLTVLNIIGNDICDEGAKFISGMKQLTNLDI 184
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN----LSNCTIDSILEGNE 251
+ + GA + ++ LN+ + + +EC L++ ++S
Sbjct: 185 SVNNIGENGAKYVSEMLNITKLNIGFNSIN-----DCVECFGKMKQLTDLNVNS------ 233
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLS 309
+ I L G FI +F + L+ L ++++S+S + ++QMK + LD+S
Sbjct: 234 -----SCIGLCGIVFI---SSF-----NQLTHLSIASNSISNYEASHISQMKNVIKLDIS 280
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ IGD+ V+ ++ + L L++S I I
Sbjct: 281 DNRIGDNGVQSIS--------------------------EMNQLTELNVSSIDITPIGIQ 314
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
Y+ M +L ++ I++ +I V + + HL +L++ V D
Sbjct: 315 YICKMDNLTYLIIAHNNIG------------VKGANQISEMKHLAQLSIYNNAVGDEGAK 362
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
+S ++L L++ + + D + LS + +LT L+ D ++ G
Sbjct: 363 FISEMEQLTFLNIGSNEIGDEGVKALSGMKQLTELNTVDNNISEEG 408
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 173/424 (40%), Gaps = 87/424 (20%)
Query: 96 NVADCRRVTSSALWA---LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
N+A+ R + + + L M LK+L+L + +G K++ S+ L L+++
Sbjct: 10 NIANLRVINNEVGFNCEILDSMKELKKLNLENNSNIHPSGFKYICSLEQLTDLYMTFCYF 69
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
LP+ + L L L YL + G+ + GA +
Sbjct: 70 R--------------------LPIA----KHLPSLKSLTYLLITGNYIGVEGAKYIGEMK 105
Query: 213 RLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 270
+L L++A G +IS LE L + N + NE I++ G FI+E
Sbjct: 106 QLKQLHIANNNIGPEGAKHISGLEQLTILN------IRANE-------ITVDGAKFISEM 152
Query: 271 EAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA------ 322
+ + ++L+ + D+ + F++ MK L +LD+S + IG++ + V+
Sbjct: 153 K-----QLTVLNIIGNDICDEGAK---FISGMKQLTNLDISVNNIGENGAKYVSEMLNIT 204
Query: 323 --------------CVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
C G L +LN++++ G+ + L LS++ I +Y
Sbjct: 205 KLNIGFNSINDCVECFGKMKQLTDLNVNSSCIGLCGI-VFISSFNQLTHLSIASNSISNY 263
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
S++S M ++ +DIS+ ++G + ++ +N L LN+ ++
Sbjct: 264 EASHISQMKNVIKLDISDN-------RIGDN-----GVQSISEMNQLTELNVSSIDITPI 311
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 486
+ + L +L + + ++ +Q+S + L LSI + + + G L
Sbjct: 312 GIQYICKMDNLTYLIIAHNNIGVKGANQISEMKHLAQLSIYNNAVGDEGAKFISEMEQLT 371
Query: 487 LLDL 490
L++
Sbjct: 372 FLNI 375
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
++ +MK L+ L ++++ IG + + ++ + L LN+ + G ++ + L +
Sbjct: 100 YIGEMKQLKQLHIANNNIGPEGAKHISGL-EQLTILNIRANEITVDGAKFIS-EMKQLTV 157
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN-- 409
L++ G I D ++S M L +DIS +I ++ ++ T L + ++ +
Sbjct: 158 LNIIGNDICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMLNITKLNIGFNSINDCV 217
Query: 410 -----LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
+ L LN+ + + + +S+F +L HLS+ + S+++ +S + + L
Sbjct: 218 ECFGKMKQLTDLNVNSSCIGLCGIVFISSFNQLTHLSIASNSISNYEASHISQMKNVIKL 277
Query: 465 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
I D + ++G+ S L L++ +T I CKM
Sbjct: 278 DISDNRIGDNGVQSISEMNQLTELNV-SSIDITPIGIQYICKM 319
>gi|374586212|ref|ZP_09659304.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
gi|373875073|gb|EHQ07067.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
Length = 346
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
+ DAE M L + + L L++ + T +AL L G LKEL+LS +TDAG+K
Sbjct: 60 GATDAE-MPRLLSMQRLEKLSLG-GQNYTDAALVHLAGFKHLKELNLSTG-PITDAGLKS 116
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ I TLEKL L+ET +T G+A L L L L L VTD + S+ + LE L L
Sbjct: 117 IGQIKTLEKLDLAETKITDAGVADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQL 176
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+ +++RG L RL L L T VT
Sbjct: 177 NMTGITDRGVEQLIQHQRLRKLILGGTAVT 206
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLN-----VADC---------- 100
P LL + E + L G+N DA + +L F++L+ LN + D
Sbjct: 66 MPRLLSM--QRLEKLSLGGQNYTDAA-LVHLAGFKHLKELNLSTGPITDAGLKSIGQIKT 122
Query: 101 --------RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
++T + + L G++ LK+L L VTDA M ++ + +LE L L+ TG+
Sbjct: 123 LEKLDLAETKITDAGVADLVGLSRLKDLSLIDTA-VTDACMTSIMQMKSLEILQLNMTGI 181
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
T G+ L Q L L LGG VTD + + + L+ +++ +G L+
Sbjct: 182 TDRGVEQLIQHQRLRKLILGGTAVTDESVGYVAQIANLDEAVFSRTKIRGKGLVRLRQAK 241
Query: 213 RLSFLNLAWTGV 224
L L LA T V
Sbjct: 242 NLRRLWLADTSV 253
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
+L L HL+ LNL ++DA L + K L L L +TD + L LS+L
Sbjct: 89 ALVHLAGFKHLKELNLSTGPITDAGLKSIGQIKTLEKLDLAETKITDAGVADLVGLSRLK 148
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+LS+ D +T++ + S +SL++L L+
Sbjct: 149 DLSLIDTAVTDACMTSIMQMKSLEILQLN 177
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 138/355 (38%), Gaps = 71/355 (20%)
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW----- 221
+V D L TD + L + +LE L L G ++ L F L LNL+
Sbjct: 52 AVKDWYALGATDAEMPRLLSMQRLEKLSLGGQNYTDAALVHLAGFKHLKELNLSTGPITD 111
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 281
G+ + I +LE L+L+ KI+ AG + + S L
Sbjct: 112 AGLKSIGQIKTLEKLDLAET----------------KITDAGVADL--------VGLSRL 147
Query: 282 SFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
L + +++++ C + QMK+LE L L+ + I D VE + + + R
Sbjct: 148 KDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGITDRGVEQL-----------IQHQR-- 194
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
L L L GT + D ++ Y++ + +L S T I+G
Sbjct: 195 -------------LRKLILGGTAVTDESVGYVAQIANLDEAVFSRTKIRGK--------- 232
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFP-LSTFKELIHLSLRNASLTDVSLHQLSSL 458
L L+ +L RL L T V D L L EL L L + +T ++ ++
Sbjct: 233 ---GLVRLRQAKNLRRLWLADTSVDDDDLIELLQPPMELDMLHLGHLKITGKTMEAIARC 289
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 513
+ + +L + + N L P LK + + +T+D + F K P + V
Sbjct: 290 NCVKDLYVGYTKIGNDDLLKLIPATRLKSITVTKTR-VTDDGYIPFHKARPDVIV 343
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 37/193 (19%)
Query: 160 LSSLQNLSVLDLGGL------------------------PVTDLVLRSLQVLTKLEYLDL 195
L S+Q L L LGG P+TD L+S+ + LE LDL
Sbjct: 69 LLSMQRLEKLSLGGQNYTDAALVHLAGFKHLKELNLSTGPITDAGLKSIGQIKTLEKLDL 128
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI-DSILEG 249
+++++ G A L RL L+L T VT + + SLE L L+ I D +E
Sbjct: 129 AETKITDAGVADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGITDRGVEQ 188
Query: 250 NENKAPLAKISLAGTTFINEREAFLY----IETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L K+ L GT +E ++ ++ ++ S + L R L Q K L
Sbjct: 189 LIQHQRLRKLILGGTAVTDESVGYVAQIANLDEAVFSRTKIRGKGLVR---LRQAKNLRR 245
Query: 306 LDLSSSMIGDDSV 318
L L+ + + DD +
Sbjct: 246 LWLADTSVDDDDL 258
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 290 SLSRFCFLTQMKALEHLDLSS----SMIGDDSVEMVACVGAN-LRNLNLSNTRFSSAGVG 344
++ ++ + Q+K + ++ + +G EM + L L+L ++ A +
Sbjct: 32 AIEQYVYTGQLKGVTMAEIRAVKDWYALGATDAEMPRLLSMQRLEKLSLGGQNYTDAALV 91
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 404
LAG +L+ L+LS I D + + + +L+ +D++ T I DLV
Sbjct: 92 HLAG-FKHLKELNLSTGPITDAGLKSIGQIKTLEKLDLAETKITD-----AGVADLV--- 142
Query: 405 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
L+ L+ L+L T V+DA + + K L L L +TD + QL +L L
Sbjct: 143 ----GLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGITDRGVEQLIQHQRLRKL 198
Query: 465 SIRDAVLTNSGLG 477
+ +T+ +G
Sbjct: 199 ILGGTAVTDESVG 211
>gi|329906145|ref|ZP_08274368.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547327|gb|EGF32161.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
Length = 518
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 162/370 (43%), Gaps = 46/370 (12%)
Query: 46 LRHLIRRRL--IFPSLLEVFKHNA--EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCR 101
LRHL +R I P+ LE + A + +E+ ++ + +A L LR L++
Sbjct: 116 LRHLTLQRCQGITPAALEAVANQANLQHLEISLRRNMTDDELASLRPLLQLRHLSLNGSS 175
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALL 160
+ S L M L+ LDL+ C + +A + HL + L++L LS LT G+A L
Sbjct: 176 GFSGSGLEDWPQMPALQVLDLTACTTIAEANLVHLAKLPDLQQLNLSSCQQLTDAGVAHL 235
Query: 161 SSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L LDL G VTD LR L L L++LD+ ++ A L F + LN
Sbjct: 236 PLASTLQHLDLSGCQQVTDAGLRGLSALRSLQHLDVHSCRLVT--GATLGDFAVMKSLNA 293
Query: 220 AW------TGVTKLPNISSLECLNLSNC---TIDSILEGNENKAPLAKISLAGTTFINER 270
+ G+ + + L+ L +++C T D++ L ++ +GT +
Sbjct: 294 GFCRRFSDAGLAAVAGMHDLQQLEITHCVALTRDALATCLPQLTQLQTLNASGTPLSDAP 353
Query: 271 EAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSS--SMIGD----------- 315
L+ + SL + +L+ L AL LDL S ++GD
Sbjct: 354 LQALFAQGSLQQLVLQHCRALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQTAL 413
Query: 316 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMM 374
+++++ C G +L F S L L+ L L G +I+D ++++ +
Sbjct: 414 ETLDLSRCSGVTGDDLR----HFQS---------LSKLQTLRLVGCGRINDAGLAHLQAL 460
Query: 375 PSLKFIDISN 384
P+LK +D+++
Sbjct: 461 PALKTLDLTD 470
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L L SL++ CR V AL AL T L+ LDLSRC VT ++H S+S L
Sbjct: 379 LAQLATSPALVSLDLRSCRGVVGDALPALGRQTALETLDLSRCSGVTGDDLRHFQSLSKL 438
Query: 143 EKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL 195
+ L L G D G+A L +L L LDL +TD LR + LE L +
Sbjct: 439 QTLRLVGCGRINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIAHFPALEKLHI 493
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 144/337 (42%), Gaps = 53/337 (15%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L ++ + +L L+ LN++ C+++T + + L + L+ LDLS C +
Sbjct: 192 QVLDLTACTTIAEANLVHLAKLPDLQQLNLSSCQQLTDAGVAHLPLASTLQHLDLSGCQQ 251
Query: 128 VTDAGMKHLLSISTLEKLWLSE----TGLTADGIALLSSLQNLSVLDLGGL--PVTDLVL 181
VTDAG++ L ++ +L+ L + TG T A++ SL G +D L
Sbjct: 252 VTDAGLRGLSALRSLQHLDVHSCRLVTGATLGDFAVMKSLN-------AGFCRRFSDAGL 304
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 241
++ + L+ L++ R A T LP ++ L+ LN S
Sbjct: 305 AAVAGMHDLQQLEITHCVALTRDAL-----------------ATCLPQLTQLQTLNASGT 347
Query: 242 TI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC----- 295
+ D+ L+ + L ++ L + E + L LD+ R C
Sbjct: 348 PLSDAPLQALFAQGSLQQLVLQHCRALTEPGLAQLATSPALVSLDL------RSCRGVVG 401
Query: 296 ----FLTQMKALEHLDLS--SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAG 348
L + ALE LDLS S + GDD + + L+ L L R + AG+ L
Sbjct: 402 DALPALGRQTALETLDLSRCSGVTGDDLRHFQSL--SKLQTLRLVGCGRINDAGLAHLQA 459
Query: 349 HLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISN 384
LP L+ L L+ + D A+ ++ P+L+ + I N
Sbjct: 460 -LPALKTLDLTDCGYLTDGALRRIAHFPALEKLHIRN 495
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 211/466 (45%), Gaps = 59/466 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+R L ++ R+T + L L G+ L+ +DL C++VTDAG+ L ++ L L L+E
Sbjct: 44 VRRLELSGNTRLTDAGLAHLAGLLSLEHVDLRSCIQVTDAGLATLAALPALHTLELAEQR 103
Query: 152 LTADGIAL--LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVL 208
A G AL + L++L++ G +T L ++ L++L++ +++ A L
Sbjct: 104 -DASGAALAQMPQLRHLTLQRCQG--ITPAALEAVANQANLQHLEISLRRNMTDDELASL 160
Query: 209 KMFPRLSFLNL------AWTGVTKLPNISSLECLNLSNCTIDSILEGN---ENKAP-LAK 258
+ +L L+L + +G+ P + +L+ L+L+ CT +I E N K P L +
Sbjct: 161 RPLLQLRHLSLNGSSGFSGSGLEDWPQMPALQVLDLTACT--TIAEANLVHLAKLPDLQQ 218
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL---SRFCFLTQMKALEHLDLSS----- 310
++L+ + + S L LD+S + L+ +++L+HLD+ S
Sbjct: 219 LNLSSCQQLTDAGVAHLPLASTLQHLDLSGCQQVTDAGLRGLSALRSLQHLDVHSCRLVT 278
Query: 311 -SMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGILAG--HLPNLEILSLSGTQIDDY 366
+ +GD +V +++LN RFS AG+ +AG L LEI D
Sbjct: 279 GATLGDFAV---------MKSLNAGFCRRFSDAGLAAVAGMHDLQQLEITHCVALTRDAL 329
Query: 367 AISYMSMMPSLKFIDISNTDI----------KGFIQQVGAETDLVLSLTALQNLN---HL 413
A + + + L+ ++ S T + +G +QQ+ + L+ L L L
Sbjct: 330 A-TCLPQLTQLQTLNASGTPLSDAPLQALFAQGSLQQLVLQHCRALTEPGLAQLATSPAL 388
Query: 414 ERLNLEQTQ--VSDA-TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD-A 469
L+L + V DA T E + LS R + +T L SLSKL L +
Sbjct: 389 VSLDLRSCRGVVGDALPALGRQTALETLDLS-RCSGVTGDDLRHFQSLSKLQTLRLVGCG 447
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
+ ++GL + +LK LDL LT+ A+ + P +E H
Sbjct: 448 RINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIAHF-PALEKLH 492
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 52 RRLIFPSLLEVFKHNA-EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWA 110
R L P L ++ A +++LR V + + LG L +L+++ C VT L
Sbjct: 372 RALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQTALETLDLSRCSGVTGDDLRH 431
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG----IALLSSLQNL 166
++ L+ L L C ++ DAG+ HL ++ L+ L L++ G DG IA +L+ L
Sbjct: 432 FQSLSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIAHFPALEKL 491
Query: 167 SV 168
+
Sbjct: 492 HI 493
>gi|149174591|ref|ZP_01853217.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
gi|148846701|gb|EDL61038.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
Length = 346
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
+ Q+K+L+ LD SSS+I D + + NL L L T AG+ L L L++L
Sbjct: 110 IAQLKSLKILDFSSSLITDSDMSYFQGL-YNLEALILERTSIGDAGLYHLRD-LRKLKVL 167
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
L T + D +SY+ + L ++++S T I L L+ + +L+ L
Sbjct: 168 RLWETDVTDVGLSYLKDLTELTYLNLSETKISD------------AGLIHLKGMLNLQTL 215
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
L+ TQVSD L L +L L L +A +TD L LS L L++ D +++ GL
Sbjct: 216 YLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRNLKKLTLADTQISDQGL 275
Query: 477 GSFKPPRSLKLLDL 490
+ L LD+
Sbjct: 276 VYLGKLKELHELDI 289
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 65 HNAEAIELRGENSVDAEWM-AYLGAFRYLRSLNVADCRR--VTSSALWALTGMTCLKELD 121
HN I G D E+ A L A L+SL + D +T S + G+ L+ L
Sbjct: 86 HNVTWISSVGYGD-DYEFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQGLYNLEALI 144
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
L R + DAG+ HL + L+ L L ET +T G++ L L L+ L+L ++D L
Sbjct: 145 LERT-SIGDAGLYHLRDLRKLKVLRLWETDVTDVGLSYLKDLTELTYLNLSETKISDAGL 203
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 241
L+ + L+ L L +QVS+RG LK P+L L+L VT + EC NL
Sbjct: 204 IHLKGMLNLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRNLKKL 263
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV--SNSSLSRFCFLTQ 299
T+ +IS G ++ + + L LD+ +N+S + L
Sbjct: 264 TLAD-----------TQISDQGLVYLGKLKE--------LHELDIRYTNTSDAGLVHLQG 304
Query: 300 MKALEHLDLSSSMIGD 315
+K+L +L+ S+ I D
Sbjct: 305 LKSLAYLNWESTKITD 320
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L LNLS T+ S AG+ L G L NL+ L L TQ+ D + Y+ +P L+ +D+ + ++
Sbjct: 188 LTYLNLSETKISDAGLIHLKGML-NLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEV 246
Query: 388 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
TD L L +L++L L TQ+SD L L KEL L +R +
Sbjct: 247 ----------TDA--GLVHLSECRNLKKLTLADTQISDQGLVYLGKLKELHELDIRYTNT 294
Query: 448 TDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKPPRS 484
+D L L L L L+ +T++G L F P S
Sbjct: 295 SDAGLVHLQGLKSLAYLNWESTKITDAGYTRLHEFLPKLS 334
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 308 LSSSMIGDDSVEMVACVGA-----NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
+SS GDD A + A +L+ L+ S++ + + + G L NLE L L T
Sbjct: 91 ISSVGYGDDYEFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQG-LYNLEALILERTS 149
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
I D + ++ + LK + + TD+ TD+ LS L++L L LNL +T+
Sbjct: 150 IGDAGLYHLRDLRKLKVLRLWETDV----------TDVGLSY--LKDLTELTYLNLSETK 197
Query: 423 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 482
+SDA L L L L L ++D L L L KL L + DA +T++GL
Sbjct: 198 ISDAGLIHLKGMLNLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSEC 257
Query: 483 RSLKLLDL 490
R+LK L L
Sbjct: 258 RNLKKLTL 265
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 117/298 (39%), Gaps = 70/298 (23%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
++ S+ D T + L A+ + LK LD S + +TD+ M + + LE L L T
Sbjct: 90 WISSVGYGDDYEFTEADLAAIAQLKSLKILDFSSSL-ITDSDMSYFQGLYNLEALILERT 148
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
S+ D G L L+ L KL+ L LW + V++ G + LK
Sbjct: 149 ----------------SIGDAG--------LYHLRDLRKLKVLRLWETDVTDVGLSYLKD 184
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 270
L++LNL+ T ++ I LNL
Sbjct: 185 LTELTYLNLSETKISDAGLIHLKGMLNLQTL----------------------------- 215
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS-VEMVACVGANLR 329
+LD + S +L ++ LE LDL + + D V + C NL+
Sbjct: 216 ------------YLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSEC--RNLK 261
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L L++T+ S G+ + G L L L + T D + ++ + SL +++ +T I
Sbjct: 262 KLTLADTQISDQGL-VYLGKLKELHELDIRYTNTSDAGLVHLQGLKSLAYLNWESTKI 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D +V+ L L + L+ LDL +VTDAG+ HL L+KL L++T ++ G+
Sbjct: 218 DATQVSDRGLIYLKELPKLETLDLLDA-EVTDAGLVHLSECRNLKKLTLADTQISDQGLV 276
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF-PRLS 215
L L+ L LD+ +D L LQ L L YL+ +++++ G L F P+LS
Sbjct: 277 YLGKLKELHELDIRYTNTSDAGLVHLQGLKSLAYLNWESTKITDAGYTRLHEFLPKLS 334
>gi|149175123|ref|ZP_01853746.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
gi|148846101|gb|EDL60441.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
Length = 1079
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
C + AL + +T L L LS V D+G+ L ++ LE+L+L T +T G+
Sbjct: 88 CPHLGDEALLYIRDLTNLDTLMLSESA-VGDSGLSCLKKLNKLERLYLDNTKVTDAGLQH 146
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
LSSL+ L VL L L VTD +++L L LE L L G+QVS+ G L +L L L
Sbjct: 147 LSSLKQLKVLSLRNLNVTDQGMQTLADLNNLEVLFLSGTQVSDAGLKSLTELKQLKILYL 206
Query: 220 AWTGVT-----KLPNISSLECLNLSNCTIDSIL 247
A T +T L + SLE L+L+ + ++
Sbjct: 207 ARTAITGSQLSALNTLESLEHLSLNRTKLQPVV 239
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
P L+ L++ + D A+ Y+ D++N D + ++ L+ L+
Sbjct: 77 QFPRLDYLAMVCPHLGDEALLYIR--------DLTNLDTLMLSESAVGDS----GLSCLK 124
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
LN LERL L+ T+V+DA L LS+ K+L LSLRN ++TD + L+ L+ L L +
Sbjct: 125 KLNKLERLYLDNTKVTDAGLQHLSSLKQLKVLSLRNLNVTDQGMQTLADLNNLEVLFLSG 184
Query: 469 AVLTNSGLGSFKPPRSLKLLDL 490
++++GL S + LK+L L
Sbjct: 185 TQVSDAGLKSLTELKQLKILYL 206
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L Q L++L + +GD+++ + + NL L LS + +G+ L L LE L
Sbjct: 75 LEQFPRLDYLAMVCPHLGDEALLYIRDL-TNLDTLMLSESAVGDSGLSCLK-KLNKLERL 132
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
L T++ D + ++S + LK + + N ++ TD + L +LN+LE L
Sbjct: 133 YLDNTKVTDAGLQHLSSLKQLKVLSLRNLNV----------TDQ--GMQTLADLNNLEVL 180
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L TQVSDA L L+ K+L L L ++T L L++L L +LS+
Sbjct: 181 FLSGTQVSDAGLKSLTELKQLKILYLARTAITGSQLSALNTLESLEHLSL 230
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
+L +++L +L+ L L ++ V D+ L L +L L L N +TD L LSSL +L
Sbjct: 95 ALLYIRDLTNLDTLMLSESAVGDSGLSCLKKLNKLERLYLDNTKVTDAGLQHLSSLKQLK 154
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
LS+R+ +T+ G+ + +L++L L G
Sbjct: 155 VLSLRNLNVTDQGMQTLADLNNLEVLFLSG 184
>gi|397646482|gb|EJK77289.1| hypothetical protein THAOC_00890 [Thalassiosira oceanica]
Length = 702
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 166/353 (47%), Gaps = 59/353 (16%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM------------------ 133
L SLNV CR +T +L A++G+ L+ LDLS+C +TD G+
Sbjct: 334 LTSLNVGGCRCLTDRSLEAMSGLLDLRRLDLSQCDLITDDGLIFLGELDLLEELSLGNKS 393
Query: 134 ------KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL-RSLQV 186
+ SI+ L+ L L+ +T DG+ L LQ+L LD+ G ++ L SL+
Sbjct: 394 CGMAIQQRNRSIA-LKTLRLARCAITNDGLDYLEQLQSLEDLDINGCSLSSTALGESLEK 452
Query: 187 LTK---------------LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPN 229
LT LE L+L +Q+S+ + + L L+L + V+ L +
Sbjct: 453 LTNLNSLDASHCPGILPGLEVLNLADTQISDNAMSKVAKLAGLRSLSLFYCNVSSRGLRH 512
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
++SLE L+ N +DS G+E + +++ G ++I + + ++ + D+
Sbjct: 513 LASLEKLDSLN--LDSRDIGDEGRP--NRVTDLGCSYIAKIKTLTTLQLAGGGVGDLG-- 566
Query: 290 SLSRFCFLTQMKALEHLDLS--SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
+ + ALE L+LS S+ + + A +NLR LNLSNTR +S +
Sbjct: 567 ----CAHIATIDALESLNLSQNESITNRGAASLAAL--SNLRALNLSNTRVTSNALKFFH 620
Query: 348 GHLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
G L L+ L+L G ++D I S +P+L+ + ++N + + +G + D
Sbjct: 621 G-LSKLQSLALYGCIMEDSPIESLQDEVPTLRCLRLNNANDNDGVIGIGHDYD 672
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
L+ L L+ I + + Y+ + SL+ +DI+ + + T L SL L NLN
Sbjct: 407 LKTLRLARCAITNDGLDYLEQLQSLEDLDINGCSL--------SSTALGESLEKLTNLNS 458
Query: 413 L------------ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
L E LNL TQ+SD + ++ L LSL +++ L L+SL K
Sbjct: 459 LDASHCPGILPGLEVLNLADTQISDNAMSKVAKLAGLRSLSLFYCNVSSRGLRHLASLEK 518
Query: 461 LTNLSI---------RDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
L +L++ R +T+ G ++L L L GG +
Sbjct: 519 LDSLNLDSRDIGDEGRPNRVTDLGCSYIAKIKTLTTLQLAGGGV 562
>gi|325108218|ref|YP_004269286.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
gi|324968486|gb|ADY59264.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
Length = 1046
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 7/187 (3%)
Query: 41 LADSL-LRH--LIRRRLIFPSLLEVFKHNAEAIEL--RGENSVDAEWMAYLGAFRYLRSL 95
LAD+ LRH L +L SL + + AE IEL RG + E + L LR L
Sbjct: 350 LADTQQLRHIRLTGNQLTEASLRHLSRCQAEIIELTGRGLKHIPNEIFSQLAKSETLRDL 409
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
+ D +T L AL+ +T L+ L + ++T AG+K L S+ L+++ L T +
Sbjct: 410 RLWDTA-LTDDNLQALSSLTSLRVL-CADGHQLTPAGLKQLASMPFLQEIRLPGANWTDE 467
Query: 156 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
IALL L++L +DL +T+ L L +T LE++DL G+ ++N+G A L L
Sbjct: 468 TIALLQPLKSLRRIDLADSAITNAGLAELANITSLEWIDLQGTDITNQGVAALAALNDLQ 527
Query: 216 FLNLAWT 222
L L T
Sbjct: 528 RLELRGT 534
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 122 LSRC----VKVTDAGMKH--------LLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
LSRC +++T G+KH L TL L L +T LT D + LSSL +L VL
Sbjct: 374 LSRCQAEIIELTGRGLKHIPNEIFSQLAKSETLRDLRLWDTALTDDNLQALSSLTSLRVL 433
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---- 225
G +T L+ L + L+ + L G+ ++ A+L+ L ++LA + +T
Sbjct: 434 CADGHQLTPAGLKQLASMPFLQEIRLPGANWTDETIALLQPLKSLRRIDLADSAITNAGL 493
Query: 226 -KLPNISSLECLNLSNCTI 243
+L NI+SLE ++L I
Sbjct: 494 AELANITSLEWIDLQGTDI 512
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 19/239 (7%)
Query: 258 KISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 316
+I G F+ +R+ + +E + + LD N + L+ +L + ++S I D
Sbjct: 286 QIRNRGGVFVGDRDLIIGVEKNTNPADLDWMNCNDDDVALLSDCPSLRRVYIASDAITDR 345
Query: 317 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG---TQIDDYAISYMSM 373
+ E++A LR++ L+ + + A + L+ EI+ L+G I + S ++
Sbjct: 346 AAELLADT-QQLRHIRLTGNQLTEASLRHLSRC--QAEIIELTGRGLKHIPNEIFSQLAK 402
Query: 374 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 433
+L+ + + +T A TD +L AL +L L L + Q++ A L L++
Sbjct: 403 SETLRDLRLWDT----------ALTDD--NLQALSSLTSLRVLCADGHQLTPAGLKQLAS 450
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L + L A+ TD ++ L L L + + D+ +TN+GL SL+ +DL G
Sbjct: 451 MPFLQEIRLPGANWTDETIALLQPLKSLRRIDLADSAITNAGLAELANITSLEWIDLQG 509
>gi|290993931|ref|XP_002679586.1| hypothetical protein NAEGRDRAFT_47566 [Naegleria gruberi]
gi|284093203|gb|EFC46842.1| hypothetical protein NAEGRDRAFT_47566 [Naegleria gruberi]
Length = 675
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 146/306 (47%), Gaps = 34/306 (11%)
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSE-TGLTADGIALLSSLQNLSVLD 170
G+ L L++ C +TD G+K+L IS L L L T + ++ +S L+ LD
Sbjct: 337 GLQTLHTLNVQGCHYITDNGVKYLTYISQNLTHLNLRGCTKVNDSAMSYISQFSQLNYLD 396
Query: 171 LGG-LPVTDLVLRSLQ---VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNL------ 219
+ G + VTDL ++ L TKL+YLDL + QV++ G L L L L
Sbjct: 397 MTGCVNVTDLGVKHLSQSACKTKLKYLDLTFCHQVTDEGVRYLSEMTELEDLTLQCCRHI 456
Query: 220 AWTGVTKLPN-ISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINER------E 271
G+T+L N ++ LNL+ C + I P L K+S+ G ++ +
Sbjct: 457 TAKGLTQLVNSCQNIRVLNLTGCHLLEISGVRSGSLPKLEKLSMMGCKLTSDNCLRVISD 516
Query: 272 AFLYIETSLLSFLD-VSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLR 329
++ +LSF D +++ + R + K L HL+L S I D S+E C+ +L
Sbjct: 517 WTCNLKELVLSFSDMITDGGIER--VIINSKNLSHLNLKKCSNITDKSLE---CISKHLS 571
Query: 330 N----LNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS- 383
N LNL+ R F++ G+ L E + +++ +++++ PSL+ +DIS
Sbjct: 572 NVVEYLNLTGVRGFTNGGLKYLENCTSLKEFVIQRCIHVNNEGLAHLAYCPSLEILDISE 631
Query: 384 NTDIKG 389
NT I G
Sbjct: 632 NTLITG 637
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--- 116
L N + LRG V+ M+Y+ F L L++ C VT + L+ C
Sbjct: 360 LTYISQNLTHLNLRGCTKVNDSAMSYISQFSQLNYLDMTGCVNVTDLGVKHLSQSACKTK 419
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA-LLSSLQNLSVLDLGGL 174
LK LDL+ C +VTD G+++L ++ LE L L +TA G+ L++S QN+ VL+L G
Sbjct: 420 LKYLDLTFCHQVTDEGVRYLSEMTELEDLTLQCCRHITAKGLTQLVNSCQNIRVLNLTGC 479
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVS 201
+ ++ L KLE L + G +++
Sbjct: 480 HLLEISGVRSGSLPKLEKLSMMGCKLT 506
>gi|71754651|ref|XP_828240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833626|gb|EAN79128.1| hypothetical protein Tb11.53.0001 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1399
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 198/427 (46%), Gaps = 49/427 (11%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W+ + + L+SLNV++C +T + AL+ ++ L+EL+++ C ++ G + +++
Sbjct: 957 WLEGISQSKSLQSLNVSNCNYITD--ISALSSLSTLEELNVNCCDRIR-KGWEAFEALTR 1013
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQV 200
L LS T +T +GI LLS +NL L+L D+ + + + LE L +
Sbjct: 1014 LRVATLSVTWVTNEGIRLLSGCKNLRNLEL--YCCGDVSNIEPINNIKSLEELTIQNCHN 1071
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE--------- 251
N G + M PRL L L T SL L S + +EG E
Sbjct: 1072 INEGLLKVGMLPRLRVLVLRKLQSTYF----SLSSLGESKSLVKLTIEGPEELCDIKLIS 1127
Query: 252 NKAPLAKISLA-GTTFINE-----REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
N A L ++ +A G +N+ + +L++ T LS ++ N+ C ++++L+
Sbjct: 1128 NIATLKELKIAHGDRLLNDVGDLGKLPWLHVLT--LSHFNMGNTCFESVC---KIRSLKS 1182
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI-D 364
LD++ S D + ++ + A L LNLS +G L LP L +L+LS T++
Sbjct: 1183 LDITHSFELPD-IYHISNLTA-LEELNLSGCYHIISGWEALTA-LPRLRVLNLSSTRVTT 1239
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
Y Y+S SL +++ + D+ TD + L ++ LE L++ + +
Sbjct: 1240 SYGGYYISRCKSLITLNLESCDM----------TD----ASCLADIKTLEELHIGKCEEL 1285
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
L T +L L+L ++ +TD L ++ + +L++ N + + +S
Sbjct: 1286 TRGFSALFTLPQLRILNLMDSLITDEDLREIQLSHTIEDLNLSYCKELND-ITPVRRIKS 1344
Query: 485 LKLLDLH 491
+K +DLH
Sbjct: 1345 IKKMDLH 1351
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 166/380 (43%), Gaps = 70/380 (18%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G N+ D++ + L + + SLN++ C +VTS ++ ++ + L EL+LS C++
Sbjct: 515 KVLDLSGTNT-DSDSLRGLCVSQTIVSLNLSHCWKVTS--VFHISALETLNELNLSDCIR 571
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQV 186
+ +AG + L + L LS T +T I+ S + L LDL + D+ SL
Sbjct: 572 I-NAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELVTLDLSFCDELFDIT--SLSN 628
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNC 241
+T LE L+L +G +VL PRL LN+ +T L N S L L NC
Sbjct: 629 ITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGNGKSFVKLILDNC 688
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
L+ TF++ + L D S + L Q++
Sbjct: 689 K-----------------GLSDVTFLSSLSTLKELN---LHHCDAVTSGIGTLGRLLQLR 728
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA-------------- 347
L DL + I ++S+E + + L +LNLS+ + ++ I +
Sbjct: 729 VL---DLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNALEKLNIDNCCH 785
Query: 348 --------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
G L L + LS T+I+D I ++S SL ++++ F + TD
Sbjct: 786 VTSGWNVFGTLHQLRVAVLSNTRINDENIRHISECKSLNTLNLA------FCNDI---TD 836
Query: 400 LVLSLTALQNLNHLERLNLE 419
+TAL N+ L LN++
Sbjct: 837 ----ITALSNITMLRELNID 852
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 193/458 (42%), Gaps = 73/458 (15%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SV+ ++ L L LN++ C ++T + L+ T ++EL+L+RC ++T G+ +
Sbjct: 310 SVEDNFLKDLCDCGPLERLNLSHCIQLTD--INPLSNATAIQELNLNRCHRITQ-GISVV 366
Query: 137 -----LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
L + ++ + LSE+ L D + SL LS+ + G D+ L L LE
Sbjct: 367 WELPKLRVLHMKDMHLSESSL--DSVGTSESLVKLSIENCAGFG--DMTL--LSSFVALE 420
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE 251
L++ G L P L LN+ K +ISS+ G
Sbjct: 421 ELNIQKCADIISGVGCLGTLPYLRVLNI------KEAHISSIG------------FTGIG 462
Query: 252 NKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
L ++++ TT +++ EA I T LS L + C L + L+ LDLS
Sbjct: 463 ASKSLLQLTIESTTGLSDVEALANILTLEKLSLLGCNGIDAGIGC-LGNLPQLKVLDLSG 521
Query: 311 SMIGDDSVEMVACVGANLRNLNLS-----------------NTRFSSAGVGILAG----- 348
+ DS+ + CV + +LNLS N S + I AG
Sbjct: 522 TNTDSDSLRGL-CVSQTIVSLNLSHCWKVTSVFHISALETLNELNLSDCIRINAGWEALE 580
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET---DLVL--- 402
L L + LS T I D IS+ S L +D+S D I + T DL L
Sbjct: 581 KLQQLHVAILSNTHITDRDISHFSKCKELVTLDLSFCDELFDITSLSNITTLEDLNLDNC 640
Query: 403 -----SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLS 456
L+ L L L LN++ ++++ + L K + L L N L+DV+ LS
Sbjct: 641 SKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGNGKSFVKLILDNCKGLSDVTF--LS 698
Query: 457 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 494
SLS L L++ SG+G+ L++LDL GW
Sbjct: 699 SLSTLKELNLHHCDAVTSGIGTLGRLLQLRVLDL--GW 734
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 170/436 (38%), Gaps = 99/436 (22%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L + ++D ++ L +I TL
Sbjct: 434 VGCLGTLPYLRVLNIKE-AHISSIGFTGIGASKSLLQLTIESTTGLSD--VEALANILTL 490
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
EKL L GI L +L L VLDL G LR L V + L+
Sbjct: 491 EKLSLLGCNGIDAGIGCLGNLPQLKVLDLSGTNTDSDSLRGLCVSQTIVSLN-------- 542
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC---LNLSNCTIDSILEGNENKAPLAKI 259
L+ W VT + +IS+LE LNLS+C I G E L ++
Sbjct: 543 --------------LSHCWK-VTSVFHISALETLNELNLSDCI--RINAGWEALEKLQQL 585
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
+A +LS +++ +S F ++ K L LDLS D+ +
Sbjct: 586 HVA-----------------ILSNTHITDRDISHF---SKCKELVTLDLS---FCDELFD 622
Query: 320 MVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 378
+ + L +LNL N G+ +L G LP L +L++ G + + I +
Sbjct: 623 ITSLSNITTLEDLNLDNCSKIRKGLSVL-GELPRLRVLNVKGVHLTNSVIGSLG------ 675
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
+ K F++ + + +T L +L+ L+ LNL DA + T L+
Sbjct: 676 -------NGKSFVKLILDNCKGLSDVTFLSSLSTLKELNLHHC---DAVTSGIGTLGRLL 725
Query: 439 HL--------SLRNASLTDV-------------------SLHQLSSLSKLTNLSIRDAVL 471
L + N SL D+ S+ ++SL+ L L+I +
Sbjct: 726 QLRVLDLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNALEKLNIDNCCH 785
Query: 472 TNSGLGSFKPPRSLKL 487
SG F L++
Sbjct: 786 VTSGWNVFGTLHQLRV 801
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + L G + + W A L A LR LN++ R TS + ++ L L+L C
Sbjct: 1204 EELNLSGCYHIISGWEA-LTALPRLRVLNLSSTRVTTSYGGYYISRCKSLITLNLESC-D 1261
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+TDA L I TLE+L + + G + L +L L +L+L +TD LR +Q+
Sbjct: 1262 MTDASC--LADIKTLEELHIGKCEELTRGFSALFTLPQLRILNLMDSLITDEDLREIQLS 1319
Query: 188 TKLEYLDL 195
+E L+L
Sbjct: 1320 HTIEDLNL 1327
>gi|290973212|ref|XP_002669343.1| predicted protein [Naegleria gruberi]
gi|284082889|gb|EFC36599.1| predicted protein [Naegleria gruberi]
Length = 440
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 27/317 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L SLN+ D + + ++ M L L++ +V D G K+L + L L
Sbjct: 115 ISAMKQLTSLNIYD-NGIGDEEIKYISEMKQLTSLNIGYN-RVGDEGAKYLSEMKQLTSL 172
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ + +G LS ++ L+ L++G + ++ + + +L L++ ++VSN GA
Sbjct: 173 NIGYNRVGIEGAKYLSEMEQLTSLNIGYSRIGIEGVKYISEMKQLTSLNISKNEVSNEGA 232
Query: 206 AVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK-- 258
L +L LN+ GV L + L L++ I LEG + + + +
Sbjct: 233 KYLSEMKQLRLLNIYHNEIGDEGVKYLSEMKQLTSLHIGYNRIG--LEGVKLISEMEQLT 290
Query: 259 --------ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
IS G +++E E TSL +D S L ++++MK L L ++
Sbjct: 291 SLDISENEISDEGAKYLSEMEQL----TSL--NIDYSRIGLEGVKYISEMKQLTSLTIAY 344
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+ IG ++++ + LR L++SN S G L+ + L L +S I + Y
Sbjct: 345 NRIGIKGAKLISEM-KQLRLLDISNNEISDEGAKYLS-EMKQLISLYISEIGIGIKGVKY 402
Query: 371 MSMMPSLKFIDISNTDI 387
+S M L+ +DI+ I
Sbjct: 403 ISEMKQLRLLDITRNRI 419
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 148/323 (45%), Gaps = 37/323 (11%)
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
L+S+++ L+ L++ + D ++ + + +L L++ ++V + GA L +L+ LN
Sbjct: 114 LISAMKQLTSLNIYDNGIGDEEIKYISEMKQLTSLNIGYNRVGDEGAKYLSEMKQLTSLN 173
Query: 219 LAW--TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
+ + G+ +S +E L N ++I + G +I+E +
Sbjct: 174 IGYNRVGIEGAKYLSEMEQLTSLNI-------------GYSRIGIEGVKYISEMKQL--- 217
Query: 277 ETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
TSL +S +VSN +L++MK L L++ + IGD+ V+ ++ + L +L++
Sbjct: 218 -TSLNISKNEVSNEGAK---YLSEMKQLRLLNIYHNEIGDEGVKYLSEM-KQLTSLHIGY 272
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF--IDISNTDIKG--FI 391
R GV +++ + L L +S +I D Y+S M L ID S ++G +I
Sbjct: 273 NRIGLEGVKLIS-EMEQLTSLDISENEISDEGAKYLSEMEQLTSLNIDYSRIGLEGVKYI 331
Query: 392 QQVGAETDLVLSLTAL--------QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
++ T L ++ + + L L++ ++SD LS K+LI L +
Sbjct: 332 SEMKQLTSLTIAYNRIGIKGAKLISEMKQLRLLDISNNEISDEGAKYLSEMKQLISLYIS 391
Query: 444 NASLTDVSLHQLSSLSKLTNLSI 466
+ + +S + +L L I
Sbjct: 392 EIGIGIKGVKYISEMKQLRLLDI 414
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 52/278 (18%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G + + E + Y+ + L SLN++ V++ L+ M L+ L++ ++ D G+
Sbjct: 199 GYSRIGIEGVKYISEMKQLTSLNISK-NEVSNEGAKYLSEMKQLRLLNIYHN-EIGDEGV 256
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K+L + L L + + +G+ L+S ++ L+ LD+
Sbjct: 257 KYLSEMKQLTSLHIGYNRIGLEGVKLISEMEQLTSLDIS--------------------- 295
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNE 251
+++S+ GA L +L+ LN+ ++ G+ + IS ++ L++ TI
Sbjct: 296 ---ENEISDEGAKYLSEMEQLTSLNIDYSRIGLEGVKYISEMK--QLTSLTI-------- 342
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLS 309
+I + G I+E + L LD+SN+ +S +L++MK L L +S
Sbjct: 343 ---AYNRIGIKGAKLISEMKQ--------LRLLDISNNEISDEGAKYLSEMKQLISLYIS 391
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
IG V+ ++ + LR L+++ R G +L+
Sbjct: 392 EIGIGIKGVKYISEM-KQLRLLDITRNRIGKEGAKLLS 428
>gi|32477504|ref|NP_870498.1| adenylate cyclase regulatory protein [Rhodopirellula baltica SH 1]
gi|32448058|emb|CAD77575.1| conserved hypothetical protein-putative adenylate cyclase
regulatory protein [Rhodopirellula baltica SH 1]
Length = 513
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 170/410 (41%), Gaps = 66/410 (16%)
Query: 79 DAEWMAYLGAFRYLRSLN---------VADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
D E +A L Y+ + N +A+ + +L L G+ E + +
Sbjct: 121 DPEAVAALTEAGYILTKNDDGNVVEFSIANQKGGIEESLQHLRGIPNTTEATFN-GPGID 179
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DAGM++L S++ L++L L++T +T + + + +L L L VTD L L L+K
Sbjct: 180 DAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSK 239
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 249
L +DL + + + G L L + L + VT EG
Sbjct: 240 LRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTD---------------------EG 278
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
APL S+ F Y T ++ ++ L Q LE+L
Sbjct: 279 LVKLAPLPLKSIN----------FNYCTT-------INGPTMK---MLGQTPTLENLQGD 318
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
S I D+S+ + + + L+ L + + G+ +AG+ L L + +DD +
Sbjct: 319 YSKINDESMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDDDGLK 376
Query: 370 YMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNHLERL 416
+S +P++ +DIS + I Q+G T L +L +L +LE L
Sbjct: 377 VISQLPAVTHVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLEEL 436
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
NL+ T V+D +L L +L L++ L D S +L+ L L ++++
Sbjct: 437 NLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 486
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 42/323 (13%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ + + L + LK L L+ +TD +K + +++L+ L+L TG+T +G+ LL+
Sbjct: 178 IDDAGMENLKSLANLKRLTLADTA-ITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTG 236
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L L +DL + D + SL + L + L S+V++ G L P L +N +
Sbjct: 237 LSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPLP-LKSINFNYC 295
Query: 223 GVTKLPNISSL-ECLNLSNCTIDSILEGNENKAPLAKIS------LAGTTFINEREAFLY 275
P + L + L N D +E+ A L +S + G E +
Sbjct: 296 TTINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQHIA 355
Query: 276 IETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-------- 325
+L F ++ +SS+ ++Q+ A+ H+D+S + S E +A +G
Sbjct: 356 GNKALARF-ELRDSSVDDDGLKVISQLPAVTHVDISECRLA--SPEGIAQLGKLTGLTYL 412
Query: 326 ------------------ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
NL LNL +T + + +L + L+ L+++GTQ+ D +
Sbjct: 413 GLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLM-KMTKLKTLNVAGTQLGDDS 471
Query: 368 ISYMSMMPSLKFIDISNTDIKGF 390
++ +P+LK ++++NT I GF
Sbjct: 472 FLELAKLPNLKSMNVANTSI-GF 493
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + ++ + L + D V L ++ + + +D+S C + G+ L
Sbjct: 346 VTGEGIQHIAGNKALARFELRDSS-VDDDGLKVISQLPAVTHVDISECRLASPEGIAQLG 404
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L ET + +A L NL L+L VTD L L +TKL+ L++ G
Sbjct: 405 KLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAG 464
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+Q+ + L P L +N+A T +
Sbjct: 465 TQLGDDSFLELAKLPNLKSMNVANTSI 491
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
+PN + +G IDD + + + +LK + +++T I TD +L +
Sbjct: 165 IPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAI----------TDQ--TLKTVGE 212
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
+ L+ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 213 MTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKS 272
Query: 470 VLTNSGLGSFKP 481
+T+ GL P
Sbjct: 273 KVTDEGLVKLAP 284
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L++L +L+RL L T ++D TL + L L LR +TD L L+ LSKL + +
Sbjct: 186 LKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDL 245
Query: 467 RDAVLTNSGLGSFKPPRSL 485
R+ + ++G+ S ++L
Sbjct: 246 RNTNIGDAGMDSLAKIKTL 264
>gi|328869082|gb|EGG17460.1| hypothetical protein DFA_08455 [Dictyostelium fasciculatum]
Length = 713
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 152/351 (43%), Gaps = 74/351 (21%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L F YL +++ C VT + + MT L L+L+ +++D +K + ++ L L
Sbjct: 343 LPGFVYLHTISFVGCSNVTDTGMEGFKTMTNLTSLNLT-GTRISDVSLKFIRRLTLLRSL 401
Query: 146 WLSETGLTADGIALLSSL------------------------QNLSVL------------ 169
L TG+T G+ LLS L NL+ L
Sbjct: 402 SLRNTGITEKGVLLLSPLSKLESLDLTNLLLTDTSMLTVATFSNLNTLLLGNALVTEKGI 461
Query: 170 -DLGGLPVTDLVL--------RSLQVLTK----LEYLDLWGSQVSNRGAAVLKMFPRLSF 216
D+ LP+T L L S+ LTK LE LD+ G+ V G LK F +L
Sbjct: 462 NDISNLPITTLSLLHCKKINNASMVYLTKYQNTLESLDITGTMVMGMGFIHLKRFKKLRD 521
Query: 217 LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
L +LPN C D ++ ++ ++K+ L+ T I + +
Sbjct: 522 L--------QLPN---------RLCITDDTIKHLDSLEFISKLHLSDYTQITSITSIPNL 564
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMK--ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
+ L L +SN+ +S T +K LEHL+L + + D V +A + L L+LS
Sbjct: 565 KR--LVDLSLSNTKISDDSIPTILKYLNLEHLNLDRTNVTDFGVSQLAVL--QLTTLSLS 620
Query: 335 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
+T+ + L+G + L+ L++S +IDD + + +P L+FID+ T
Sbjct: 621 STKINGTCFPELSG-ITLLKWLNVSNNEIDDAKVPALFKLPELQFIDLRGT 670
>gi|290993162|ref|XP_002679202.1| predicted protein [Naegleria gruberi]
gi|284092818|gb|EFC46458.1| predicted protein [Naegleria gruberi]
Length = 345
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 134/313 (42%), Gaps = 45/313 (14%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N V +E Y+ + L SL++ D + + L+ + L L++S V G K
Sbjct: 78 QNQVGSEGCKYISELKQLTSLSI-DENFIYDEGVEYLSELAQLTYLNISNN-GVGSEGCK 135
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
++ + L L + +G +S+L L LD+ + D L + L++L LD
Sbjct: 136 YVGKMKRLTSLGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGDKGLEHIGQLSQLTSLD 195
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA 254
L+ +++ N GA L +L++LN++ + GNE
Sbjct: 196 LYCNKIGNGGAKYLSELKQLTYLNISENHI------------------------GNE--- 228
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
G +I E + + + +++ + N + ++ ++K L +L++S + IG
Sbjct: 229 --------GIKYIGELKQLVNL---IINNNRIGNDGVK---YIGELKQLTYLNISENRIG 274
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
++ ++ + + L N+ +S S G + G L L L LS ID+ Y+S +
Sbjct: 275 NEGIKYIGDL-KQLTNIIISRNWIGSEGAKYI-GKLSQLTSLGLSSNNIDNEGAKYLSEL 332
Query: 375 PSLKFIDISNTDI 387
L F++I I
Sbjct: 333 KELSFLNIERNKI 345
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 14/217 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
+++++K L L + + I D+ VE ++ + A L LN+SN S G + G + L
Sbjct: 88 YISELKQLTSLSIDENFIYDEGVEYLSEL-AQLTYLNISNNGVGSEGCKYV-GKMKRLTS 145
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF--IQQVGAETDLVLSLTALQN-- 409
L +I Y+S + LK +DIS T+I KG I Q+ T L L + N
Sbjct: 146 LGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGDKGLEHIGQLSQLTSLDLYCNKIGNGG 205
Query: 410 ------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L LN+ + + + + + K+L++L + N + + + + L +LT
Sbjct: 206 AKYLSELKQLTYLNISENHIGNEGIKYIGELKQLVNLIINNNRIGNDGVKYIGELKQLTY 265
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
L+I + + N G+ + L + + W+ +E A
Sbjct: 266 LNISENRIGNEGIKYIGDLKQLTNIIISRNWIGSEGA 302
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 153/344 (44%), Gaps = 32/344 (9%)
Query: 175 PVTDLVLR-------SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
+T+L++R + L +L L ++ S + R + +L++LN+ G+
Sbjct: 3 SLTELIIRCDEQDAKYIGGLKQLTRLTIYSSHI--RDIGKISELKQLTYLNVPANGIWCY 60
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER----EAFLYI-ETSLLS 282
E L+ ID G+E ++++ + I+E E Y+ E + L+
Sbjct: 61 TTKQVKEFKQLTTLIIDQNQVGSEGCKYISELKQLTSLSIDENFIYDEGVEYLSELAQLT 120
Query: 283 FLDVSNSSL-SRFC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+L++SN+ + S C ++ +MK L L ++ IG + + ++ + L+ L++S T
Sbjct: 121 YLNISNNGVGSEGCKYVGKMKRLTSLGFYNNRIGKEGAKYISTLNQ-LKQLDISRTNIGD 179
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-----NTDIKGFIQQVG 395
G+ + G L L L L +I + Y+S + L +++IS N IK +I ++
Sbjct: 180 KGLEHI-GQLSQLTSLDLYCNKIGNGGAKYLSELKQLTYLNISENHIGNEGIK-YIGELK 237
Query: 396 AETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
+L+++ + N L L LN+ + ++ + + + K+L ++ + +
Sbjct: 238 QLVNLIINNNRIGNDGVKYIGELKQLTYLNISENRIGNEGIKYIGDLKQLTNIIISRNWI 297
Query: 448 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+ LS+LT+L + + N G + L L++
Sbjct: 298 GSEGAKYIGKLSQLTSLGLSSNNIDNEGAKYLSELKELSFLNIE 341
>gi|46446906|ref|YP_008271.1| hypothetical protein pc1272 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400547|emb|CAF23996.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 618
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 190/403 (47%), Gaps = 47/403 (11%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
+ LN + +T + L AL LK L L C +TDAG+ +L ++TL+ L L+
Sbjct: 228 IEELNFSKNASLTDAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGCK 287
Query: 152 LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLK 209
G+A L+ L L L+L +TD L L +LT L YL+L + +++ G A L
Sbjct: 288 FANAGLAHLTPLVALQHLNLSHCRNLTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHLT 347
Query: 210 MFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
L++LNL+ G+ L +++L LNLS+C N A LA ++ L
Sbjct: 348 PLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSC-------NNLTDAGLAHLTPLV 400
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV 321
T +N + + + L LT + AL+HLDL I D + +
Sbjct: 401 TLTHLNLSWCYNFTDAGL--------------AHLTPLVALQHLDLGHCRNITDAGLAHL 446
Query: 322 ACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKF 379
+ A L +LNLS F+ AG+ LA L L+ L L+G Q+ D +++++ + +L
Sbjct: 447 TPLVA-LTHLNLSWCYNFTDAGLAHLAP-LVALQHLDLNGCWQLTDAGLAHLAPLVALTH 504
Query: 380 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 439
+D+S+ + A + L ALQ+L+ NL +DA L L+ L H
Sbjct: 505 LDLSSCN-----HLTDAGLPHLTPLVALQHLDLSYCRNL-----TDAGLAHLAPLVALTH 554
Query: 440 LSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFK 480
L+L + + TD L L+ L L +L++ T++GL FK
Sbjct: 555 LNLSSCNHFTDAGLTHLTPLLALQDLNLNYCENFTDAGLAHFK 597
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L N++ +A+L L LN++ C T + L LT + L+ LDL C +T
Sbjct: 380 LNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNIT 439
Query: 130 DAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVL 187
DAG+ HL + L L LS T G+A L+ L L LDL G +TD L L L
Sbjct: 440 DAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHLDLNGCWQLTDAGLAHLAPL 499
Query: 188 TKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSN 240
L +LDL + +++ G L L L+L++ G+ L + +L LNLS+
Sbjct: 500 VALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTDAGLAHLAPLVALTHLNLSS 559
Query: 241 C 241
C
Sbjct: 560 C 560
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 169/342 (49%), Gaps = 34/342 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L+ ++ +AYL L+ LN+A C + ++ L LT + L+ L+LS C
Sbjct: 252 NLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGC-KFANAGLAHLTPLVALQHLNLSHC 310
Query: 126 VKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRS 183
+TDAG+ HL ++ L L LS +T G+A L+ L L+ L+L +TD L
Sbjct: 311 RNLTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAH 370
Query: 184 LQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECL 236
L LT L YL+L + +++ G A L L+ LNL+W G+ L + +L+ L
Sbjct: 371 LTPLTALTYLNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHL 430
Query: 237 NLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSL--------LSFLDVS 287
+L +C N A LA ++ L T +N + + + L L LD++
Sbjct: 431 DLGHCR-------NITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHLDLN 483
Query: 288 NS---SLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTR-FSSAG 342
+ + L + AL HLDLSS + + D + + + A L++L+LS R + AG
Sbjct: 484 GCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVA-LQHLDLSYCRNLTDAG 542
Query: 343 VGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ LA L L L+LS D +++++ + +L+ ++++
Sbjct: 543 LAHLAP-LVALTHLNLSSCNHFTDAGLTHLTPLLALQDLNLN 583
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 152/319 (47%), Gaps = 34/319 (10%)
Query: 47 RHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSS 106
R+L L + + L +H + L G +A +A+L L+ LN++ CR +T +
Sbjct: 262 RNLTDAGLAYLTPLTTLQH----LNLAGCKFANAG-LAHLTPLVALQHLNLSHCRNLTDA 316
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQN 165
L LT +T L L+LS C +TDAG+ HL ++ L L LS LT G+A L+ L
Sbjct: 317 GLPHLTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTA 376
Query: 166 LSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW-- 221
L+ L+L +TD L L L L +L+L W ++ G A L L L+L
Sbjct: 377 LTYLNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCR 436
Query: 222 ----TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA-----------KISLAGTTF 266
G+ L + +L LNLS C + G + APL +++ AG
Sbjct: 437 NITDAGLAHLTPLVALTHLNLSWC-YNFTDAGLAHLAPLVALQHLDLNGCWQLTDAGLAH 495
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVG 325
+ A +++ S S ++++ L LT + AL+HLDLS + D + +A +
Sbjct: 496 LAPLVALTHLDLS--SCNHLTDAGLPH---LTPLVALQHLDLSYCRNLTDAGLAHLAPLV 550
Query: 326 ANLRNLNLSN-TRFSSAGV 343
A L +LNLS+ F+ AG+
Sbjct: 551 A-LTHLNLSSCNHFTDAGL 568
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLE 354
+LT + L+HL+L+ + + + + A L++LNLS+ R + AG+ L
Sbjct: 271 YLTPLTTLQHLNLAGCKFANAGLAHLTPLVA-LQHLNLSHCRNLTDAGLPHLTLLTALTY 329
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDIS---NTDIKGFIQQVGAETDLVLSLTALQNLN 411
+ I D +++++ + +L ++++S N G L+L++ NL
Sbjct: 330 LNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLT 389
Query: 412 H-----------LERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSL 458
L LNL +DA L L+ L HL L + ++TD L L+ L
Sbjct: 390 DAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPL 449
Query: 459 SKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
LT+L++ T++GL P +L+ LDL+G W LT+ +
Sbjct: 450 VALTHLNLSWCYNFTDAGLAHLAPLVALQHLDLNGCWQLTDAGL 493
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L LN++ C T + L LT + L++L+L+ C TDAG+ H S++T
Sbjct: 543 LAHLAPLVALTHLNLSSCNHFTDAGLTHLTPLLALQDLNLNYCENFTDAGLAHFKSLATF 602
Query: 143 EKL 145
L
Sbjct: 603 PNL 605
>gi|156406568|ref|XP_001641117.1| predicted protein [Nematostella vectensis]
gi|156228254|gb|EDO49054.1| predicted protein [Nematostella vectensis]
Length = 803
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + L + L SLN+ VT L L G+ L LDLS +TD+G++++
Sbjct: 595 VTDECLVALNSHPSLSSLNILQTS-VTDRGLQHLKGLP-LSSLDLSDYRNITDSGVQYIA 652
Query: 138 SISTLEKLWLSETGLTADGIA------------------------LLSSLQNLSVLDLGG 173
+++L +L LS T LT +G+ +LS+ NL +L L
Sbjct: 653 GMTSLTRLLLSNTRLTDEGMVQLSGLAKLVELNVDRTVVTDKGSRVLSNFANLQILGLSS 712
Query: 174 LPVTDLVLRS--LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----- 226
VTD +LR L KL L+L + V+NRG L++ L+ LNL WT VT
Sbjct: 713 TGVTDKLLRDGVLNRCKKLCKLNLSRTSVTNRGIKHLELN-SLTLLNLDWTRVTADCGLL 771
Query: 227 LPNISSLECLNLSNCTIDS 245
L +L+ L +SNCT S
Sbjct: 772 LTGCPALKALRMSNCTPPS 790
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 30/367 (8%)
Query: 37 LPAHLADSLLRHLIRRRLIFPSLLEVFKHNA-EAIELRGENSVDAEWMAYLGAFRYLRSL 95
LP ++ D ++ L+ + + P +L F I+L V + +A L R L L
Sbjct: 430 LPHNVCDKIISRLVEDKALTPKVLHAFISCCLRYIKLDCYLLVTNDLLAELRFHRQLVHL 489
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM----KHLLSISTLEKLWLSETG 151
++ C +T AL A+ + L L L K++D G+ H I TL L L+ TG
Sbjct: 490 SIKSCPIITDKALEAVVDLPALTTLQLDN-TKISDKGLMYFSGHANCIQTLVHLSLNGTG 548
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+T G A L+ + L +L L +T L V+R LQ L+ L++ + V++ L
Sbjct: 549 VTNQGTASLADWKILRILGLENTKITSLDVIRHLQ---HLKTLNVAFTGVTDECLVALNS 605
Query: 211 FPRLSFLNLAWTGVTK--------LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA 262
P LS LN+ T VT LP +SSL+ + N T DS ++ L ++ L+
Sbjct: 606 HPSLSSLNILQTSVTDRGLQHLKGLP-LSSLDLSDYRNIT-DSGVQYIAGMTSLTRLLLS 663
Query: 263 GTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD----DS 317
T +E L L+ +D + + L+ L+ L LSS+ + D D
Sbjct: 664 NTRLTDEGMVQLSGLAKLVELNVDRTVVTDKGSRVLSNFANLQILGLSSTGVTDKLLRDG 723
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 377
V + C L LNLS T ++ G+ L L +L +L+L T++ ++ P+L
Sbjct: 724 V-LNRC--KKLCKLNLSRTSVTNRGIKHL--ELNSLTLLNLDWTRVTADCGLLLTGCPAL 778
Query: 378 KFIDISN 384
K + +SN
Sbjct: 779 KALRMSN 785
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
+L V+N L+ F Q L HL + S +I D ++E V + A L L L NT+ S
Sbjct: 469 YLLVTNDLLAELRFHRQ---LVHLSIKSCPIITDKALEAVVDLPA-LTTLQLDNTKISDK 524
Query: 342 GVGILAGH---LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
G+ +GH + L LSL+GT + + + ++ L+ + + NT I
Sbjct: 525 GLMYFSGHANCIQTLVHLSLNGTGVTNQGTASLADWKILRILGLENTKIT---------- 574
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
SL +++L HL+ LN+ T V+D L L++ L L++ S+TD L L L
Sbjct: 575 ----SLDVIRHLQHLKTLNVAFTGVTDECLVALNSHPSLSSLNILQTSVTDRGLQHLKGL 630
Query: 459 SKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHEL 517
L++L + D +T+SG+ SL L L LT++ ++Q + +E+ +
Sbjct: 631 -PLSSLDLSDYRNITDSGVQYIAGMTSLTRL-LLSNTRLTDEGMVQLSGLAKLVELNVDR 688
Query: 518 SVI 520
+V+
Sbjct: 689 TVV 691
>gi|12581504|gb|AAG59625.1| GU1 [Trypanosoma brucei]
gi|261333153|emb|CBH16148.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 846
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 188/442 (42%), Gaps = 75/442 (16%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+V + W+ L A RYL LNVA CR V + L+ + LK LDLS TD G ++L
Sbjct: 403 NVRSRWLESLRACRYLVELNVAYCRDVVEVSF--LSELRLLKHLDLSG----TDIGEQNL 456
Query: 137 LSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
I E L L + + + L +L+ L LD + D + + KLE+L
Sbjct: 457 DPIGQCEGLTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLS 516
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE- 248
+ L+ L L+LA T G++ LP SLE +++S C + + LE
Sbjct: 517 FRYCHLLT-DVKCLEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLITHLEF 575
Query: 249 --------------------GNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLD-- 285
G AP L +++L NE + + L +L
Sbjct: 576 LRPLPNLQQVVADQMNLTDIGGLTGAPSLRRVTL------NESKRLGTVGEVRLPYLQEL 629
Query: 286 ------VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTR 337
+SN+ + L ++L+HLD+ SV ++ + NLR L L N R
Sbjct: 630 SLRKSTISNAGIRS--LLASCRSLQHLDMQHC----HSVTELSALSQLPNLRELLLRNIR 683
Query: 338 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD-----IKGFIQ 392
+ + +A + NL L ++ D ++ +S + SL+ ID+S T IKG +
Sbjct: 684 VTGEFMTHIASCV-NLRKLQMTECA-DITDVNCLSALQSLEDIDLSRTSVTTEGIKGLSK 741
Query: 393 QVG------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+E V ++ L L L L+LE+T V+D + LS +L L+L S
Sbjct: 742 CYALRKLNLSECRYVTNVNCLGKLPFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKCS 801
Query: 447 -LTDVS-LHQLSSLSKLTNLSI 466
+T+V LH SSL L +
Sbjct: 802 RITNVERLH--SSLPHLEEFDV 821
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 195/490 (39%), Gaps = 97/490 (19%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+++V E M + R L SL V +C + ++L ++T + SR DA
Sbjct: 139 KSAVTNEMMHIVSMARDLESLTVRNCFSESEASLCSVTSIL------NSRATNRRDARTF 192
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE--Y 192
+L +G+T+ G+ L+ L L L P+++ ++ T LE
Sbjct: 193 YL-------------SGVTSLGV-----LRCLRSLTLFATPLSNQIMSYFCECTNLERVV 234
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNEN 252
+D VS A L+ LS LN T LP IS +C +L +D+ ++
Sbjct: 235 VDSCCGLVSLECFAALQRLTHLSVLNCTITD-EGLPPIS--KCFSLQYVMLDNCMK---- 287
Query: 253 KAPLAKISLAGT-----TFINEREAFLYIETSLLSFLDVSNSSLSRFC---------FLT 298
L ++ G+ T I R E + + + + RF F++
Sbjct: 288 ---LRSLNCLGSLRNLRTLIVSRNRI--PEEGVQGLRKLRDLEVLRFSVFNRPTAVEFIS 342
Query: 299 QMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 357
+ +L LDL + +GD V C L+ L LS R S V LA L L L
Sbjct: 343 SLGSLVELDLRDNWVGDAGCASFVHC--RQLQQLKLSCCRRVS-DVRWLAA-LTCLRTLD 398
Query: 358 LSGTQI-----------------------DDYAISYMSMMPSLKFIDISNTDI------- 387
LS T + D +S++S + LK +D+S TDI
Sbjct: 399 LSHTNVRSRWLESLRACRYLVELNVAYCRDVVEVSFLSELRLLKHLDLSGTDIGEQNLDP 458
Query: 388 ----KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
+G + + V L L+ L L +L+ E+T + DA + + K+L LS R
Sbjct: 459 IGQCEGLTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLSFR 518
Query: 444 NASL-TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
L TDV L L L L + +TN G+ S SL+ +D+ L+T L
Sbjct: 519 YCHLLTDVKC--LEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLITH---L 573
Query: 503 QFCKMHPRIE 512
+F + P ++
Sbjct: 574 EFLRPLPNLQ 583
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E I+L SV E + L LR LN+++CR VT+ + L + L+EL L +
Sbjct: 722 EDIDL-SRTSVTTEGIKGLSKCYALRKLNLSECRYVTN--VNCLGKLPFLRELHLEK-TN 777
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
VTD G+ L + LE L L++ + L SSL +L D+ G V
Sbjct: 778 VTDKGIAGLSNCIQLETLALTKCSRITNVERLHSSLPHLEEFDVYGTSV 826
>gi|254829631|ref|ZP_05234318.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
gi|258602049|gb|EEW15374.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
Length = 1778
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 177/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 380 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 434
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 435 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 468
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 469 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 524
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 525 KEFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 582
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++A +G NL +L N F+ G LPNLE L +S
Sbjct: 583 VIHDLPSLETFNAQTNLIANIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDN 642
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 643 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNN 694
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 695 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L +L NL
Sbjct: 313 SLATLNGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKNLPNL 369
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ + P+L L L G+T
Sbjct: 370 VNITADSCAIEDL--GTLNNLPKLQTLVLSDNENLTNITAITDL-PQLKTLTLDGCGITS 426
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L I SI E + LS+
Sbjct: 427 IGTLDNLPKLEKLDLKENQITSISE--------------------------ITDLPRLSY 460
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS ++L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 461 LDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST---LTNFPSLNYINISNNVIRTVG- 516
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 517 --KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLD 572
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + S + + +L LE N + +++ + T L L+ N S + SL
Sbjct: 573 VHSNRITSTSVIHDLPSLETFNAQTNLIAN-----IGTMDNLPDLTYVNLSFNRIPSLAP 627
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L L L + D LG+ L++LDL +L
Sbjct: 628 IGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 203/466 (43%), Gaps = 50/466 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L GE D ++ + +YL +L + S L L + L L+LS +
Sbjct: 159 LDLSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV 218
Query: 130 D-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ--V 186
+ +G++ L++ L++L +S D I+ ++SL L + G + L L++ V
Sbjct: 219 NLSGVEDLVN---LQELNVSANKALED-ISQVASLPVLKEISAQGCNIKTLELKNPAGAV 274
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCT 242
L +LE L + ++N + L P+L L N + + L + L+ ++ SNCT
Sbjct: 275 LPELETFYLQENDLTNLTS--LAKLPKLKNLYIKGNASLKSLATLNGATKLQLIDASNCT 332
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
L + L I L+G + + E TSL + ++ N + C + +
Sbjct: 333 DLETLGDISGLSELEMIQLSGCSKLKEI-------TSLKNLPNLVNITADS-CAIEDLGT 384
Query: 303 LEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
L +L +++ D+ + L+ L L +S G +LP LE L L
Sbjct: 385 LNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGT---LDNLPKLEKLDL 441
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNT------DIKG--FIQQVGAETDLVLSLTALQNL 410
QI +IS ++ +P L ++D+S D+K ++ + ++ + ++ L N
Sbjct: 442 KENQI--TSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNF 499
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL-HQLSSLSKLTNLSIRDA 469
L +N+ + T+ ++ L +N S++D+S+ H + +L K + +
Sbjct: 500 PSLNYINISNNVIR--TVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRK---VDASNN 554
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
++TN +G+F L+ LD+H + + I P +E ++
Sbjct: 555 LITN--IGTFDNLPKLQSLDVHSNRITSTSVIHDL----PSLETFN 594
>gi|71748370|ref|XP_823240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832908|gb|EAN78412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 846
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 188/442 (42%), Gaps = 75/442 (16%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+V + W+ L A RYL LNVA CR V + L+ + LK LDLS TD G ++L
Sbjct: 403 NVRSRWLESLRACRYLVELNVAYCRDVVEVSF--LSELRLLKHLDLSG----TDIGEQNL 456
Query: 137 LSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
I E L L + + + L +L+ L LD + D + + KLE+L
Sbjct: 457 DPIGRCEGLTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLS 516
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE- 248
+ L+ L L+LA T G++ LP SLE +++S C + + LE
Sbjct: 517 FRYCHLLT-DVKCLEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLITHLEF 575
Query: 249 --------------------GNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLD-- 285
G AP L +++L NE + + L +L
Sbjct: 576 LRPLPNLQQVVADQMNLTDIGGLTGAPSLRRVTL------NESKRLGTVGEVRLPYLQEL 629
Query: 286 ------VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTR 337
+SN+ + L ++L+HLD+ SV ++ + NLR L L N R
Sbjct: 630 SLRKSTISNAGIRS--LLASCRSLQHLDMQHC----HSVTELSALSQLPNLRELLLRNIR 683
Query: 338 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD-----IKGFIQ 392
+ + +A + NL L ++ D ++ +S + SL+ ID+S T IKG +
Sbjct: 684 VTGEFMTHIASCV-NLRKLQMTECA-DITDVNCLSALQSLEDIDLSRTSVTTEGIKGLSK 741
Query: 393 QVG------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+E V ++ L L L L+LE+T V+D + LS +L L+L S
Sbjct: 742 CYALRKLNLSECRYVTNVNCLGKLPFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKCS 801
Query: 447 -LTDVS-LHQLSSLSKLTNLSI 466
+T+V LH SSL L +
Sbjct: 802 RITNVERLH--SSLPHLEEFDV 821
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 195/490 (39%), Gaps = 97/490 (19%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+++V E M + R L SL V +C + ++L ++T + SR DA
Sbjct: 139 KSAVTNEMMHIVSMARDLESLTVRNCFSESEASLCSVTSIL------NSRATNRRDARTF 192
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE--Y 192
+L +G+T+ G+ L+ L L L P+++ ++ T LE
Sbjct: 193 YL-------------SGVTSLGV-----LRCLRSLTLFATPLSNQIMSYFCECTNLERVV 234
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNEN 252
+D VS A L+ LS LN T LP IS +C +L +D+ ++
Sbjct: 235 VDSCCGLVSLECFAALQRLTHLSVLNCTITD-EGLPPIS--KCFSLQYVMLDNCMK---- 287
Query: 253 KAPLAKISLAGT-----TFINEREAFLYIETSLLSFLDVSNSSLSRFC---------FLT 298
L ++ G+ T I R E + + + + RF F++
Sbjct: 288 ---LRSLNCLGSLRNLRTLIVSRNRI--PEEGVQGLRKLRDLEVLRFSVFNRPTAVEFIS 342
Query: 299 QMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 357
+ +L LDL + +GD V C L+ L LS R S V LA L L L
Sbjct: 343 SLGSLVELDLRDNWVGDAGCASFVHC--RQLQQLKLSCCRRVS-DVRWLAA-LTCLRTLD 398
Query: 358 LSGTQI-----------------------DDYAISYMSMMPSLKFIDISNTDI------- 387
LS T + D +S++S + LK +D+S TDI
Sbjct: 399 LSHTNVRSRWLESLRACRYLVELNVAYCRDVVEVSFLSELRLLKHLDLSGTDIGEQNLDP 458
Query: 388 ----KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
+G + + V L L+ L L +L+ E+T + DA + + K+L LS R
Sbjct: 459 IGRCEGLTFLLLKDCSSVKDLHFLETLRELVKLDTERTGIMDANVCQVVACKKLEFLSFR 518
Query: 444 NASL-TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
L TDV L L L L + +TN G+ S SL+ +D+ L+T L
Sbjct: 519 YCHLLTDVKC--LEGLRNLKTLDLAGTNVTNEGISSLPKCVSLEYVDVSECCLITH---L 573
Query: 503 QFCKMHPRIE 512
+F + P ++
Sbjct: 574 EFLRPLPNLQ 583
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E I+L SV E + L LR LN+++CR VT+ + L + L+EL L +
Sbjct: 722 EDIDL-SRTSVTTEGIKGLSKCYALRKLNLSECRYVTN--VNCLGKLPFLRELHLEK-TN 777
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
VTD G+ L + LE L L++ + L SSL +L D+ G V
Sbjct: 778 VTDKGIAGLSNCIQLETLALTKCSRITNVERLHSSLPHLEEFDVYGTSV 826
>gi|261331843|emb|CBH14837.1| leucine-rich repeat protein (LRRP, pseudogene),putative
[Trypanosoma brucei gambiense DAL972]
Length = 1517
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 171/362 (47%), Gaps = 38/362 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L G N+ D E + L + + SLN++ C ++T+ + ++ + L EL+LS C ++
Sbjct: 581 LDLSGTNT-DNESLRSLCLSQTMVSLNLSHCWKMTN--MSHISSLEALNELNLSDCFEI- 636
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+AG + L + L LS T +T I+ S +NL LDL L + +L +T
Sbjct: 637 NAGWEALEKLQQLHVAILSNTHITDGDISHFSKCKNLVTLDLSFCDKL-LDVTALSNITT 695
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSNCTID 244
LE L+L +G +VL PRL LN L + + L N S L+L NC
Sbjct: 696 LEDLNLSNCSKIRKGLSVLGELPRLRVLNVKGVLLEDSVIGSLGNGKSFAKLSLENCKGF 755
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--LSFLDVS-----NSSLSRFCFL 297
++ N L +++L + ++ + + SL L LD+ N+SL C
Sbjct: 756 GDVKPLSNLVTLEELNLH---YCDKVTSGMGTLGSLPQLRVLDLGRTQADNNSLENIC-- 810
Query: 298 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 357
T L L+LS S+ +A + A L LN+ N ++G + G L L + +
Sbjct: 811 TSSIPLVLLNLSHCK-KITSISTIASLTA-LEELNIDNCCNVTSGWNVF-GTLHQLRVAT 867
Query: 358 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
LS T+I+D I Y+S SL ++++ F + + TD +TAL + LE LN
Sbjct: 868 LSNTRINDENIRYVSECKSLNTLNLA------FCKDI---TD----VTALSKITMLEELN 914
Query: 418 LE 419
L+
Sbjct: 915 LD 916
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 168/419 (40%), Gaps = 74/419 (17%)
Query: 95 LNVADCRRVTSS--ALWALTGMTCL--KELDLSR-----------CVKVT---DAG---M 133
LN+ CRR+T +W L + L K++ LS VKV+ AG M
Sbjct: 400 LNLNGCRRITRGMGVVWVLPKLRVLHMKDMHLSEPSLDSVGTGGPLVKVSLDNCAGFGDM 459
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL-TKLEY 192
L SI TLE+L + + G+ L +L L L GLP V R L + +
Sbjct: 460 TLLSSIVTLEELNIQKCVDIISGVGCLGTLPYLVYLTWCGLPWYTTVPRVLNIKEAHISS 519
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNL-AWTGVTKLPNISSLECLNLSNCT-IDSILEGN 250
LD G S K +L+ ++ + V L NI +LE L+L C ID+++
Sbjct: 520 LDFTGICAS-------KSLLQLNMESITGLSNVEALANILTLEKLSLLGCNGIDAVIGCL 572
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
N L + L+GT NE L + +++S +LS +T M + L+
Sbjct: 573 GNPPQLKMLDLSGTNTDNESLRSLCLSQTMVSL------NLSHCWKMTNMSHISSLEA-- 624
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
L LNLS+ +AG L L L + LS T I D IS+
Sbjct: 625 -----------------LNELNLSDCFEINAGWEALE-KLQQLHVAILSNTHITDGDISH 666
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
S +L +D+S F D +L +TAL N+ LE LNL L
Sbjct: 667 FSKCKNLVTLDLS------F-------CDKLLDVTALSNITTLEDLNLSNCSKIRKGLSV 713
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L L L+++ L D + L + LS+ + G G KP +L L+
Sbjct: 714 LGELPRLRVLNVKGVLLEDSVIGSLGNGKSFAKLSLENC----KGFGDVKPLSNLVTLE 768
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 220/566 (38%), Gaps = 129/566 (22%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTS-SALWALTGMTCLK---------------- 118
N+VD +L L L +AD ++ + + LT + CL+
Sbjct: 240 NNVDNNGARHLFNIGTLEELVIADTMQLANIRGISRLTNLKCLELNSTDIDDSCVRRICA 299
Query: 119 -----ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
+L +S C + DA + ++ LE+L L+ GI L L L VLDL G
Sbjct: 300 CVKLFKLSVSECNNIMDA--TPISQLAALEELNLNSCYHITKGIGTLGMLLRLRVLDLSG 357
Query: 174 LPVTDLVLRSLQVLTKLEYLDLW-----------------------GSQVSNRGAAVLKM 210
PV D L+ L LE L+L G + RG V+ +
Sbjct: 358 APVEDNFLKDLCDCGSLERLNLSYCIQLTDINPLSNAAATEELNLNGCRRITRGMGVVWV 417
Query: 211 FPRLSFLNL----------------------------AWTGVTKLPNISSLECLNLSNCT 242
P+L L++ + +T L +I +LE LN+ C
Sbjct: 418 LPKLRVLHMKDMHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTLLSSIVTLEELNIQKC- 476
Query: 243 IDSILE-GNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
+D I G P L ++ G + L I+ + +S LD F +
Sbjct: 477 VDIISGVGCLGTLPYLVYLTWCGLPWYTTVPRVLNIKEAHISSLD--------FTGICAS 528
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K+L L++ S + G +VE +A + L L+L A +G L G+ P L++L LSG
Sbjct: 529 KSLLQLNMES-ITGLSNVEALANI-LTLEKLSLLGCNGIDAVIGCL-GNPPQLKMLDLSG 585
Query: 361 TQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQ 408
T D+ ++ + + ++ +++S+ T++ I + A +L LS AL+
Sbjct: 586 TNTDNESLRSLCLSQTMVSLNLSHCWKMTNM-SHISSLEALNELNLSDCFEINAGWEALE 644
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
L L L T ++D + S K L+ L L S D L +++LS +T L D
Sbjct: 645 KLQQLHVAILSNTHITDGDISHFSKCKNLVTLDL---SFCD-KLLDVTALSNITTL--ED 698
Query: 469 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 528
L+N K + L +L G L PR+ V + V+ IGS
Sbjct: 699 LNLSNCS----KIRKGLSVL----GEL-------------PRLRVLNVKGVLLEDSVIGS 737
Query: 529 NGPSPSRTSLRASLVKQKQDPMPMSH 554
G S L K D P+S+
Sbjct: 738 LGNGKSFAKLSLENCKGFGDVKPLSN 763
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 190/477 (39%), Gaps = 97/477 (20%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA----GMKHLLSISTLEKLWLSET 150
LN++ C+++TS + + +T L+EL++ C VT G H L ++TL S T
Sbjct: 819 LNLSHCKKITS--ISTIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATL-----SNT 871
Query: 151 GLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ + I +S ++L+ L+L +TD+ +L +T LE L+L +G L
Sbjct: 872 RINDENIRYVSECKSLNTLNLAFCKDITDVT--ALSKITMLEELNLDCCHNIRKGIETLG 929
Query: 210 MFPRLSFLNLA--------WTGVTKLPNISSLECLNLSNCTI---DSILEGNE------- 251
P+ L++ V L +S L S T + +L G+
Sbjct: 930 KLPKARILSMKECYMETDMRNNVPSLGIVSHLNSWKASQGTYPKHEGMLHGDGYAQQCSI 989
Query: 252 --NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS--SLSRFCFLTQMKALEHLD 307
N L K++L + +A I T LD + + F L +++ L +
Sbjct: 990 LGNSKSLVKLNLERSMGFISVKALSNIATLEELVLDHAQEVCCIPSFSCLPRLRVL---N 1046
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA-------------------- 347
L + I D + ++ +LR+LNLS+ ++ + + +L+
Sbjct: 1047 LKYTDINGDVTKNIS-ESKSLRSLNLSHCKWVT-DISVLSSLSTLEELNISECEQIRKGW 1104
Query: 348 ---GHLPNLEILSLSGTQI---DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
G LP L + LS T+I D +S + LKF + ++ + +L+
Sbjct: 1105 ESLGKLPLLRVAILSDTKITAKDIVCLSSCKTLVKLKFFRCEELSDVTVVYKIQSLEELI 1164
Query: 402 L-----SLTALQNLNHLERLN----------------------LEQTQVSDATLFPLSTF 434
+ L L L RL L + SD ++ + T
Sbjct: 1165 VKNCSDGLKGLNAPGTLPRLRFFASAKCERMLLVHSHGCVFLLLRNVRGSDISVESIGTS 1224
Query: 435 KELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
K L+ L++ LTD + LS ++ L LS+R+ G+G+ + LK LDL
Sbjct: 1225 KSLVRLTIEVGEDLTDTT--PLSDITSLEELSLRECGDNLGGVGTLEKLPRLKSLDL 1279
>gi|326528121|dbj|BAJ89112.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1068
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 191/450 (42%), Gaps = 75/450 (16%)
Query: 136 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
LLS+ LE L LS G ++ L S++NL L+L G+P T V L L+KL++
Sbjct: 130 LLSLKHLEHLDLSMNCLLGPSSHIPRFLGSMENLRYLNLSGMPFTGRVPSQLGNLSKLQH 189
Query: 193 LDLWG---SQVSNRGAAVLKMFPRLSFLNLAWTGVTK-------LPNISSLECLNLSNCT 242
LDL S++ + L P L +L+L+ +++ L I SL ++LS+C+
Sbjct: 190 LDLGQDDYSEMYSMDITWLTKLPLLQYLSLSGINLSRIAVWPRTLNTIPSLRVIHLSDCS 249
Query: 243 IDSILEG--NENKAPLAKISLAGTTFINE-REAFLYIETSL------------------- 280
+D+ + + N L K+ L+ ++ + TSL
Sbjct: 250 LDTASQSLPHLNLTKLEKLDLSYNNLDRSIASSWFWKVTSLKYLSLRQNRLLGKFPDALG 309
Query: 281 ----LSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSV--EMVACVGANLRNLNL 333
L LD+S+++L++ L + LE LDLS +SM GD V E + C L+ L+
Sbjct: 310 NMTSLKVLDLSDNNLNKTGNLKNLCHLEILDLSDNSMNGDIVVLMEGLQCAREKLQELHF 369
Query: 334 SNTRFSSAGVGIL---AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
+ +F +G L G +L IL +S + + + L ++D+S + G
Sbjct: 370 NGNKF----IGTLPNVVGEFSSLRILDMSNNNLFGLIPLGLCNLVRLTYLDLSMNQLNGN 425
Query: 391 I-QQVGAETDLVL------SLTA-----LQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
+ ++GA T L +LT L L HL L+L+ +++ + L
Sbjct: 426 VPTEIGALTALTYLVIFSNNLTGSIPAELGKLKHLTILSLKDNKITGPIPPEVMHSTSLT 485
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRD----AVLTNSGLGSFKPPRSLKL------- 487
L L + L ++L L + L + + V+T + K S+ L
Sbjct: 486 TLDLSSNHLNGTVPNELGYLKNMIGLDLSNNNLSGVITEEHFANLKSLYSIDLSSNSLRI 545
Query: 488 ---LDLHGGWLLTEDAILQFCKMHPRIEVW 514
D H ++ + AI C+M P VW
Sbjct: 546 VVDSDWHSPFISLQTAIFASCQMGPLFPVW 575
>gi|290991306|ref|XP_002678276.1| predicted protein [Naegleria gruberi]
gi|284091888|gb|EFC45532.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 168/380 (44%), Gaps = 36/380 (9%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M L L++S ++ D K ++ + L L + + +GI L+S ++ L++LD+ G
Sbjct: 100 MKQLTSLNISNN-QINDETAKSIIEMKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISG 158
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
+ D ++ + + +L L+++ +++ G+ + +L+ L++++ + S
Sbjct: 159 NSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSIS 218
Query: 234 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
E L++ T+ GN+ I G I+E + L+ LD+S +S+
Sbjct: 219 ELKQLTSLTVS----GNQ-------IGDEGIKLISEMKQ--------LTLLDISGNSIGD 259
Query: 294 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 351
+++MK L L++ ++ IG + + + L +L++S G ++ +
Sbjct: 260 KGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEM-KQLTSLDISYNEIGDEGAKSIS-EMK 317
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 411
L L++SG QI D I +S M L +DIS + VG + + ++ +
Sbjct: 318 QLTSLTISGNQIGDEGIKLISEMKQLTLLDISG-------KSVGDK-----GVKSISKMK 365
Query: 412 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 471
L L + ++ A +S K+L L + + D +S L +LT L I +
Sbjct: 366 QLTSLTIYTNEIGVAGAKFISEMKQLTSLDISYNEIGDEGAKSISELKQLTLLDISGNGI 425
Query: 472 TNSGLGSFKPPRSLKLLDLH 491
+ G + LK LD+
Sbjct: 426 GDEGSKFIIGMKQLKSLDIQ 445
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 143/309 (46%), Gaps = 25/309 (8%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
NS+ + + + + L SLN+ + + + + + M L LD+S ++ D G K
Sbjct: 159 NSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIE-MKQLTSLDISYN-EIGDEGAKS 216
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S + +GI L+S ++ L++LD+ G + D ++ + + +L L++
Sbjct: 217 ISELKQLTSLTVSGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLTSLNI 276
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
+ +++ G+ + +L+ L++++ + S E L++ TI GN+
Sbjct: 277 YNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTIS----GNQ---- 328
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMI 313
I G I+E + L+ LD+S S+ +++MK L L + ++ I
Sbjct: 329 ---IGDEGIKLISEMKQ--------LTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEI 377
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
G + ++ + L +L++S G ++ L L +L +SG I D ++
Sbjct: 378 GVAGAKFISEM-KQLTSLDISYNEIGDEGAKSIS-ELKQLTLLDISGNGIGDEGSKFIIG 435
Query: 374 MPSLKFIDI 382
M LK +DI
Sbjct: 436 MKQLKSLDI 444
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 143/343 (41%), Gaps = 45/343 (13%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN---- 218
++ L+ LD+GG + D ++ + + +L LD+ G+ + ++G + +L+ LN
Sbjct: 124 MKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLTSLNIYNN 183
Query: 219 -LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 277
+ G + + L L++S I G+E ++ E
Sbjct: 184 EIGVAGSKFIIEMKQLTSLDISYNEI-----GDEGAKSIS-------------------E 219
Query: 278 TSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
L+ L VS + + +++MK L LD+S + IGD V+ ++ + L +LN+ N
Sbjct: 220 LKQLTSLTVSGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKM-KQLTSLNIYN 278
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
AG + + L L +S +I D +S M L + IS Q+G
Sbjct: 279 NEIGVAGSKFII-EMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGN-------QIG 330
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
E + + + L L++ V D + +S K+L L++ + +
Sbjct: 331 DE-----GIKLISEMKQLTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEIGVAGAKFI 385
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
S + +LT+L I + + G S + L LLD+ G + E
Sbjct: 386 SEMKQLTSLDISYNEIGDEGAKSISELKQLTLLDISGNGIGDE 428
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 42/253 (16%)
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
IN+ A IE L+ LD+ + + +++MK L LD+S + IGD V+ ++ +
Sbjct: 113 INDETAKSIIEMKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKM 172
Query: 325 GANLRNLNLSNTRFSSAGVGILA-----------------------GHLPNLEILSLSGT 361
L +LN+ N AG + L L L++SG
Sbjct: 173 -KQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTVSGN 231
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
QI D I +S M L +DIS I KG + + + L LN+
Sbjct: 232 QIGDEGIKLISEMKQLTLLDISGNSIGDKG--------------VKPISKMKQLTSLNIY 277
Query: 420 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
++ A + K+L L + + D +S + +LT+L+I + + G+
Sbjct: 278 NNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGNQIGDEGIKLI 337
Query: 480 KPPRSLKLLDLHG 492
+ L LLD+ G
Sbjct: 338 SEMKQLTLLDISG 350
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 42/205 (20%)
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
S+ F+++MK L L++S++ I D++ + +
Sbjct: 90 SIENHKFISEMKQLTSLNISNNQINDETAKSII--------------------------E 123
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTAL 407
+ L L + G QI D I +S M L +DIS I KG + +
Sbjct: 124 MKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKG--------------VKPI 169
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
+ L LN+ ++ A + K+L L + + D +S L +LT+L++
Sbjct: 170 SKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTVS 229
Query: 468 DAVLTNSGLGSFKPPRSLKLLDLHG 492
+ + G+ + L LLD+ G
Sbjct: 230 GNQIGDEGIKLISEMKQLTLLDISG 254
>gi|430746590|ref|YP_007205719.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
gi|430018310|gb|AGA30024.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
Length = 506
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 25/295 (8%)
Query: 218 NLAWTGVTKLPNISSLECLNLSNCTIDS--ILEGNENKAPLAKISLAGTTFINEREAFLY 275
NL G+ +L +S L+ L++ T DS L G K L+ + L ++ A +
Sbjct: 162 NLTPAGMAQLRTLSRLKGLSVRGFT-DSHGFLAGLMGKTRLSHLRLPEAAVTDDEMAIIG 220
Query: 276 IETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD-----DSVEMVACVGANLR 329
T L LD N + F + +K L LD+ I D D V++ +G +
Sbjct: 221 GLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGVRITDLAPVTDLVQL-DVLGLSPD 279
Query: 330 NLNLSNTRFSSAG---VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
+ + S G +G L G L NL L+L TQI+D ++ + +P L ++ I
Sbjct: 280 RATFARSVPSPGGPSSLGPLRG-LTNLTQLTLGATQIEDRELAVAAGLPKLSYLMIGGRR 338
Query: 387 IK----GFIQQVGAETDLVLSLTALQNLNHLER-------LNLEQTQVSDATLFPLSTFK 435
I + + + T L + T++ +L L L +E + ++DA L PLS
Sbjct: 339 ITEAGLARLAESKSLTGLRFTDTSIADLRPLSPRLHALWGLYMENSALTDAGLEPLSDAT 398
Query: 436 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+ L++ + +TD LH L+ L L L + + +T++GLG K +SL+ L L
Sbjct: 399 RIGDLTITGSRMTDAGLHHLAPLPSLWKLRLGRSAITDAGLGRLKSLKSLETLSL 453
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 149/362 (41%), Gaps = 77/362 (21%)
Query: 65 HNAEAIELRGENSVD--AEWMAYLGAFRYLRSLNVADCRRVTSSA--LWALTGMTCLKEL 120
H E ++G + + MA L L+ L+V R T S L L G T L L
Sbjct: 148 HGVEWFTIQGHAAPNLTPAGMAQLRTLSRLKGLSV---RGFTDSHGFLAGLMGKTRLSHL 204
Query: 121 DLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL------ 174
L VTD M + ++ LE L L +T G A +++L+ LS+LD+ G+
Sbjct: 205 RLPEAA-VTDDEMAIIGGLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGVRITDLA 263
Query: 175 PVTDLV--------------------------LRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
PVTDLV L L+ LT L L L +Q+ +R AV
Sbjct: 264 PVTDLVQLDVLGLSPDRATFARSVPSPGGPSSLGPLRGLTNLTQLTLGATQIEDRELAVA 323
Query: 209 KMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCTI-------------------- 243
P+LS+L + G+ +L SL L ++ +I
Sbjct: 324 AGLPKLSYLMIGGRRITEAGLARLAESKSLTGLRFTDTSIADLRPLSPRLHALWGLYMEN 383
Query: 244 ----DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL----LSFLDVSNSSLSRFC 295
D+ LE + + +++ G+ + L SL L ++++ L R
Sbjct: 384 SALTDAGLEPLSDATRIGDLTITGSRMTDAGLHHLAPLPSLWKLRLGRSAITDAGLGR-- 441
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
L +K+LE L L+ + + D SVE +A +L++LNL + S AG+ L LP +I
Sbjct: 442 -LKSLKSLETLSLTETKLTDSSVETLAGF-QSLKSLNLDRSGISPAGIERLKQALPKTQI 499
Query: 356 LS 357
S
Sbjct: 500 SS 501
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 183/402 (45%), Gaps = 36/402 (8%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVAD--CRRVTSSALWALTGMTCLKELDLSRCVK 127
+ L G+N VD E + +G + + +T + + L ++ LK L + R
Sbjct: 129 VHLEGDN-VDDELLENVGKLHGVEWFTIQGHAAPNLTPAGMAQLRTLSRLKGLSV-RGFT 186
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ + L+ + L L L E +T D +A++ L +L VL L G VTD + L
Sbjct: 187 DSHGFLAGLMGKTRLSHLRLPEAAVTDDEMAIIGGLTDLEVLQLDGRNVTDRGFAHVANL 246
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI- 246
+L LD+ G ++++ + P + L G++ P+ ++ S S+
Sbjct: 247 KELSLLDMPGVRITD-------LAPVTDLVQLDVLGLS--PDRATFARSVPSPGGPSSLG 297
Query: 247 -LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKAL 303
L G N L +++L G T I +RE + LS+L + ++ L + K+L
Sbjct: 298 PLRGLTN---LTQLTL-GATQIEDRELAVAAGLPKLSYLMIGGRRITEAGLARLAESKSL 353
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
L + + I D + ++ L L + N+ + AG+ L+ + L+++G+++
Sbjct: 354 TGLRFTDTSIAD--LRPLSPRLHALWGLYMENSALTDAGLEPLS-DATRIGDLTITGSRM 410
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
D + +++ +PSL + + + I TD L L++L LE L+L +T++
Sbjct: 411 TDAGLHHLAPLPSLWKLRLGRSAI----------TD--AGLGRLKSLKSLETLSLTETKL 458
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
+D+++ L+ F+ L L+L + ++ + +L T +S
Sbjct: 459 TDSSVETLAGFQSLKSLNLDRSGISPAGIERLKQALPKTQIS 500
>gi|421611905|ref|ZP_16053033.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
gi|408497310|gb|EKK01841.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
Length = 455
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 149/354 (42%), Gaps = 60/354 (16%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DAGM++L S+ L+ L L++T +T + + L ++ L L VTD L L L
Sbjct: 120 IDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGL 179
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDS 245
+KL +DL S + + G L L+ + L + VT L ++SL
Sbjct: 180 SKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKSKVTDEGLVKLTSL------------ 227
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
PL I+ T IN L Q LE+
Sbjct: 228 ---------PLKSINFNYCTTING----------------------PTMKMLGQTPTLEN 256
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L S I D+S+ + + + L+ L + + G+ +AG+ L L + +DD
Sbjct: 257 LQGDYSKINDESMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDD 314
Query: 366 YAISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNH 412
+ +S +P++ ++DIS + I Q+G T L +L+ +L +
Sbjct: 315 DGLKVISQLPAVTYVDISECRLASPEGIAQLGELTGLTYLGLWETKTNDETLSGFGDLIN 374
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
LE LNL+ T V+D +L L +L L++ L D S +L+ L L ++++
Sbjct: 375 LEELNLKSTSVTDESLPVLMKMIKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 428
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 150/322 (46%), Gaps = 40/322 (12%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ + + LT + LK L L+ +TD +K + +++ L+L TG+T +G+ LL+
Sbjct: 120 IDDAGMENLTSLPKLKYLTLADTA-ITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTG 178
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG------------------ 204
L L +DL + D + SL + L + L S+V++ G
Sbjct: 179 LSKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKSKVTDEGLVKLTSLPLKSINFNYCT 238
Query: 205 ---AAVLKMF---PRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI--DSILEGNE 251
+KM P L L ++ + +L +S L+ L + C + + I
Sbjct: 239 TINGPTMKMLGQTPTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQHIAG 298
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEHLDL 308
NKA LA+ L ++ +++ + + ++++D+S L+ L ++ L +L L
Sbjct: 299 NKA-LARFELRDSS-VDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGELTGLTYLGL 356
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ D+++ + NL LNL +T + + +L + L+ L+++GTQ+ D +
Sbjct: 357 WETKTNDETLSGFGDL-INLEELNLKSTSVTDESLPVLM-KMIKLKTLNVAGTQLGDDSF 414
Query: 369 SYMSMMPSLKFIDISNTDIKGF 390
++ +P+LK ++++NT I GF
Sbjct: 415 LELAKLPNLKSMNVANTSI-GF 435
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
+PN + +G IDD + ++ +P LK++ +++T I TD L
Sbjct: 107 IPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAI----------TDETLKTAG--K 154
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
L+ ++ L L +T V+D L L+ +L + LRN+++ D + L+ + L ++ + +
Sbjct: 155 LDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKS 214
Query: 470 VLTNSGL 476
+T+ GL
Sbjct: 215 KVTDEGL 221
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + ++ + L + D V L ++ + + +D+S C + G+ L
Sbjct: 288 VTGEGIQHIAGNKALARFELRDSS-VDDDGLKVISQLPAVTYVDISECRLASPEGIAQLG 346
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L ET + ++ L NL L+L VTD L L + KL+ L++ G
Sbjct: 347 ELTGLTYLGLWETKTNDETLSGFGDLINLEELNLKSTSVTDESLPVLMKMIKLKTLNVAG 406
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+Q+ + L P L +N+A T +
Sbjct: 407 TQLGDDSFLELAKLPNLKSMNVANTSI 433
>gi|261334051|emb|CBH17045.1| T. brucei spp.-specific protein [Trypanosoma brucei gambiense DAL972]
Length = 1399
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 198/427 (46%), Gaps = 49/427 (11%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W+ + + L+SLNV++C +T + AL+ ++ L+EL+++ C ++ G + +++
Sbjct: 957 WLEGISQSKSLQSLNVSNCNYITD--ISALSSLSTLEELNVNCCDRIR-KGWEAFEALTR 1013
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQV 200
L LS T +T +GI LLS +NL L+L D+ + + + LE L +
Sbjct: 1014 LRVATLSVTWVTNEGIRLLSGCKNLRNLEL--YCCRDVSNIEPINNIKSLEELTIQNCHN 1071
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE--------- 251
N G + M PRL L L T SL L S + +EG E
Sbjct: 1072 INEGLLKVGMLPRLRVLVLRKLQSTYF----SLSSLGESKSLVKLTIEGPEELCDIKLIS 1127
Query: 252 NKAPLAKISLA-GTTFINE-----REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
N A L ++ +A G +N+ + +L++ T LS ++ N+ C ++++L+
Sbjct: 1128 NIATLKELKIAHGDRLLNDVGDLGKLPWLHVLT--LSHFNMGNTCFESVC---KIRSLKS 1182
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI-D 364
LD++ S D + ++ + A L LNLS +G L LP L +L+LS T++
Sbjct: 1183 LDITHSFELPD-IYHISNLTA-LEELNLSGCYHIISGWEALTA-LPRLRVLNLSSTRVTT 1239
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
Y Y+S SL +++ + D+ TD + L ++ LE L++ + +
Sbjct: 1240 SYGGYYISRCKSLITLNLESCDM----------TD----ASCLADIKTLEELHIGKCEEL 1285
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
L T +L L+L ++ +TD L ++ + +L++ N + + +S
Sbjct: 1286 TRGFSALFTLPQLRILNLMDSLITDEDLREIQLSHTIEDLNLSYCKELND-ITPVRRIKS 1344
Query: 485 LKLLDLH 491
+K +DLH
Sbjct: 1345 IKKMDLH 1351
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 166/380 (43%), Gaps = 70/380 (18%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L G N+ D++ + L + + SLN++ C +VTS ++ ++ + L EL+LS C++
Sbjct: 515 KVLDLSGTNT-DSDSLRGLCVSQTIVSLNLSHCWKVTS--VFHISALETLNELNLSDCIR 571
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQV 186
+ +AG + L + L LS T +T I+ S + L LDL + D+ SL
Sbjct: 572 I-NAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELVTLDLSFCDELFDIT--SLSN 628
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNC 241
+T LE L+L +G +VL PRL LN+ +T L N S L L NC
Sbjct: 629 ITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGNGKSFVKLILDNC 688
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
L+ TF++ + L D S + L Q++
Sbjct: 689 K-----------------GLSDVTFLSSLSTLKELN---LHHCDAVTSGIGTLGRLLQLR 728
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA-------------- 347
L DL + I ++S+E + + L +LNLS+ + ++ I +
Sbjct: 729 VL---DLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNALEKLNIDNCCH 785
Query: 348 --------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
G L L + LS T+I+D I ++S SL ++++ F + TD
Sbjct: 786 VTSGWNVFGTLHQLRVAVLSNTRINDENIRHISECKSLNTLNLA------FCNDI---TD 836
Query: 400 LVLSLTALQNLNHLERLNLE 419
+TAL N+ L LN++
Sbjct: 837 ----ITALSNITMLRELNID 852
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 190/456 (41%), Gaps = 69/456 (15%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SV+ ++ L L LN++ C ++T+ + L+ T ++EL+L+ C ++T G+ +
Sbjct: 310 SVEDNFLKDLCDCGPLERLNLSYCIQLTN--INPLSNATAIEELNLNGCRRIT-RGIGVV 366
Query: 137 LSISTLEKLWLSETGLTA---DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
++ L L + L+ D + SL +S+ + G D+ L L + LE L
Sbjct: 367 WALPKLRVLHMKGVHLSEPSLDSVGTGGSLVKVSLDNCAGFG--DMTL--LSSIVTLEEL 422
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
++ G L P L LN+ K +ISSL+ G
Sbjct: 423 NIQKCADIISGVCCLGTLPYLRVLNI------KEAHISSLD------------FTGIGAS 464
Query: 254 APLAKISLAGTTFINEREAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
L +++L T ++ EA I T LS L + C L + L+ LDLS +
Sbjct: 465 KSLLQLTLESITGLSNVEALANILTLEKLSLLGCNGIDAGIGC-LGNLPQLKVLDLSGTN 523
Query: 313 IGDDSVEMVACVGANLRNLNLS-----------------NTRFSSAGVGILAG-----HL 350
DS+ + CV + +LNLS N S + I AG L
Sbjct: 524 TDSDSLRGL-CVSQTIVSLNLSHCWKVTSVFHISALETLNELNLSDCIRINAGWEALEKL 582
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET---DLVL----- 402
L + LS T I D IS+ S L +D+S D I + T DL L
Sbjct: 583 QQLHVAILSNTHITDRDISHFSKCKELVTLDLSFCDELFDITSLSNITTLEDLNLDNCSK 642
Query: 403 ---SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSL 458
L+ L L L LN++ ++++ + L K + L L N L+DV+ LSSL
Sbjct: 643 IRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGNGKSFVKLILDNCKGLSDVTF--LSSL 700
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 494
S L L++ SG+G+ L++LDL GW
Sbjct: 701 STLKELNLHHCDAVTSGIGTLGRLLQLRVLDL--GW 734
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 169/398 (42%), Gaps = 67/398 (16%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L + LK L L R + + +HL +I TLE+L +++T + I +S L NL L
Sbjct: 176 SLNNLDMLKRLCL-RSNNIDNNDARHLFNIGTLEELAITDT-MQLTNIRGISRLTNLKCL 233
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
DL + D + + KL L + S+ +N A T +
Sbjct: 234 DLNSTNIDDSCIGEISACAKLSKLSV--SECNNIIDA------------------TPISQ 273
Query: 230 ISSLECLNL-SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
+++LE LNL SNC I T I L + LS + V +
Sbjct: 274 LAALEELNLNSNCHI--------------------TKGIGTLGMLLRLRMLDLSGVSVED 313
Query: 289 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
+ L C LE L+LS I ++ ++ A + LNL+ R + G+G++
Sbjct: 314 NFLKDLC---DCGPLERLNLSYC-IQLTNINPLSNATA-IEELNLNGCRRITRGIGVVWA 368
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-----------IQQVGAE 397
LP L +L + G + + ++ + SL + + N GF ++++ +
Sbjct: 369 -LPKLRVLHMKGVHLSEPSLDSVGTGGSLVKVSLDNC--AGFGDMTLLSSIVTLEELNIQ 425
Query: 398 --TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQ 454
D++ + L L +L LN+++ +S + K L+ L+L S+T +S +
Sbjct: 426 KCADIISGVCCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLTLE--SITGLSNVEA 483
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L+++ L LS+ ++G+G LK+LDL G
Sbjct: 484 LANILTLEKLSLLGCNGIDAGIGCLGNLPQLKVLDLSG 521
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 170/437 (38%), Gaps = 101/437 (23%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L L +++ ++ L +I TL
Sbjct: 434 VCCLGTLPYLRVLNIKE-AHISSLDFTGIGASKSLLQLTLESITGLSN--VEALANILTL 490
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
EKL L GI L +L L VLDL G LR L V + L+
Sbjct: 491 EKLSLLGCNGIDAGIGCLGNLPQLKVLDLSGTNTDSDSLRGLCVSQTIVSLN-------- 542
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC---LNLSNCT-IDSILEGNENKAPLAK 258
L+ W VT + +IS+LE LNLS+C I++ E E L
Sbjct: 543 --------------LSHCWK-VTSVFHISALETLNELNLSDCIRINAGWEALEKLQQL-H 586
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDS 317
+++ T I +R+ + + L LD+S FC E D++S S I
Sbjct: 587 VAILSNTHITDRDISHFSKCKELVTLDLS------FCD-------ELFDITSLSNI---- 629
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 377
L +LNL N G+ +L G LP L +L++ G + + I +
Sbjct: 630 --------TTLEDLNLDNCSKIRKGLSVL-GELPRLRVLNVKGVHLTNSVIGSLG----- 675
Query: 378 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 437
+ K F++ + + +T L +L+ L+ LNL DA + T L
Sbjct: 676 --------NGKSFVKLILDNCKGLSDVTFLSSLSTLKELNLHHC---DAVTSGIGTLGRL 724
Query: 438 IHL--------SLRNASLTDV-------------------SLHQLSSLSKLTNLSIRDAV 470
+ L + N SL D+ S+ ++SL+ L L+I +
Sbjct: 725 LQLRVLDLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNALEKLNIDNCC 784
Query: 471 LTNSGLGSFKPPRSLKL 487
SG F L++
Sbjct: 785 HVTSGWNVFGTLHQLRV 801
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + L G + + W A L A LR LN++ R TS + ++ L L+L C
Sbjct: 1204 EELNLSGCYHIISGWEA-LTALPRLRVLNLSSTRVTTSYGGYYISRCKSLITLNLESC-D 1261
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+TDA L I TLE+L + + G + L +L L +L+L +TD LR +Q+
Sbjct: 1262 MTDASC--LADIKTLEELHIGKCEELTRGFSALFTLPQLRILNLMDSLITDEDLREIQLS 1319
Query: 188 TKLEYLDL 195
+E L+L
Sbjct: 1320 HTIEDLNL 1327
>gi|428173313|gb|EKX42216.1| hypothetical protein GUITHDRAFT_74106 [Guillardia theta CCMP2712]
Length = 527
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 217/498 (43%), Gaps = 62/498 (12%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLG-AFRY 91
SL+ +P + +L L R + S L + +A L + +W+ LG +F
Sbjct: 38 SLDGIPNEMVQALFDSLAYSRRLEKSHLPLLSRICDA-SLFAYPLIADDWLEVLGESFHA 96
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-T 150
L L++++C VT + L + L+ + L C+++ DA ++ + +S+L L +S T
Sbjct: 97 LTRLDMSNCIHVTDEGISRLRSLQSLRSIKLENCLRLGDATLEVIGELSSLSHLSVSACT 156
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ + G++ LS L ++ L+L L D + SL+ LT L L+L + + L+
Sbjct: 157 RMASSGVSCLSQLVRMTDLNLERLTRLDSEGIESLEKLTNLRILNLGWTNADDDSFESLR 216
Query: 210 MFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI--------------------- 243
PRL LN+ G+ L +++ LE L + +C +
Sbjct: 217 SLPRLKRLNVCACPFTEDGLQALCSLTQLESLRMCSCKVGATSALVELSSLGKLKLLDLS 276
Query: 244 ------DSILEGNENKAPLAKISLAGTTFINEREAFLY----IETSLLSFLDVSNSSLSR 293
D LE + L + LA T + +L ++T L V+N L
Sbjct: 277 QCEHVGDQTLEALRGLSDLKILLLAHTRVTDIGLGYLSSLWDLKTLNLDCCHVTNGGLQT 336
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
LT LE+LDLS +++ S + L++LNL +T S AGV + G L NL
Sbjct: 337 IANLTN---LENLDLSDNVV-TSSGLALLTGLTTLKSLNLFSTGVSDAGVIHVTG-LTNL 391
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQV----------GAETD 399
L+L I D ++ +S + +L+ +D+ + +I + G TD
Sbjct: 392 VRLNLDSRLITDSGLACISGLTNLQELDLFGAKVTHHGTIYIGLLTSLTSLELCGGGLTD 451
Query: 400 LVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
++ L+ L + LN+ Q + +S+ + P+S L L++ + + L+
Sbjct: 452 --EAMRELKRLTRMRNLNVSQNESLSNGSFIPMSRMSLLTSLNIAGTNFSSDGARHLTIF 509
Query: 459 SKLTNLSIRDAVLTNSGL 476
+ LT+L +R L+ + L
Sbjct: 510 TDLTSLCLRFDCLSRTCL 527
>gi|47097221|ref|ZP_00234784.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258612341|ref|ZP_05711837.1| cell wall surface anchor family protein [Listeria monocytogenes
F6900]
gi|47014407|gb|EAL05377.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258611023|gb|EEW23631.1| cell wall surface anchor family protein [Listeria monocytogenes
F6900]
Length = 778
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 175/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 380 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 434
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 435 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 468
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 469 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 524
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 525 KEFYAQNNSISDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 582
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL ++ N F+ G LPNLE L +S
Sbjct: 583 VIHDLPSLETFNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDN 642
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 643 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLMELNLRNN 694
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 695 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 176/425 (41%), Gaps = 82/425 (19%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L L+ ++ ++C + + L ++G+ L+ + LS C K +K + S+ L
Sbjct: 314 LATLNGATKLQLIDASNCTDLET--LGDISGLLELEMIQLSGCSK-----LKEITSLKNL 366
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L +TAD A + DLG +L L KL+ L L ++
Sbjct: 367 PNL----VNITADSCA---------IEDLG----------TLNNLPKLQTLVLSDNENLT 403
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
A+ + P+L L L G+T L N+ LE L+L I SI E
Sbjct: 404 NITAITDL-PQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQITSISE----------- 451
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
+ LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 452 ---------------ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST- 495
Query: 320 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 379
+L +N+SN + G LP+L+ I D IS + MP+L+
Sbjct: 496 --LTNFPSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRK 548
Query: 380 IDISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
+D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 549 VDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----I 603
Query: 432 STFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
T L ++ N S + SL + L L L + D LG+ L++LDL
Sbjct: 604 GTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDL 663
Query: 491 HGGWL 495
+L
Sbjct: 664 QNNYL 668
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 206/473 (43%), Gaps = 64/473 (13%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L GE D ++ + +YL +L + S L L + L L+LS +
Sbjct: 159 LDLSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV 218
Query: 130 D-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ--V 186
+ +G++ L++ L++L +S D I+ ++SL L + G + L L++ V
Sbjct: 219 NLSGVEDLVN---LQELNVSANKALED-ISQVASLPVLKEISAQGCNIKTLELKNPAGAV 274
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCT 242
L +LE L + ++N + L P+L L N + + L + L+ ++ SNCT
Sbjct: 275 LPELETFYLQENDLTNLTS--LAKLPKLKNLYIKGNASLKSLATLNGATKLQLIDASNCT 332
Query: 243 -------IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
I +LE L I L+G + + E + +L + ++++ S C
Sbjct: 333 DLETLGDISGLLE-------LEMIQLSGCSKLKEITSL----KNLPNLVNITADS----C 377
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTRFSSAGVGILAGHLP 351
+ + L +L +++ D+ + L+ L L +S G +LP
Sbjct: 378 AIEDLGTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGT---LDNLP 434
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT------DIKG--FIQQVGAETDLVLS 403
LE L L QI +IS ++ +P L ++D+S D+K ++ + ++ +
Sbjct: 435 KLEKLDLKENQI--TSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSD 492
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL-HQLSSLSKLT 462
++ L N L +N+ + T+ ++ L +N S++D+S+ H + +L K
Sbjct: 493 VSTLTNFPSLNYINISNNVIR--TVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRK-- 548
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
+ + ++TN +G+F L+ LD+H + + I P +E ++
Sbjct: 549 -VDASNNLITN--IGTFDNLPKLQSLDVHSNRITSTSVIHDL----PSLETFN 594
>gi|46445968|ref|YP_007333.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399609|emb|CAF23058.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 616
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N + + L + + + +A+L + L+ LN+ C ++T + L L + L+ L+LS+C
Sbjct: 370 NLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGLAHLRPLVNLQHLNLSKC 429
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGL--TADGIALLSSLQNLSVLDLGGL-PVTDLVLR 182
K+TDAG+ HL + L+ L LS L T G+A L+ L +L L+L +TD+ L
Sbjct: 430 PKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCCNELTDIGLM 489
Query: 183 SLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSLEC 235
L L L++LDL G +++ G L L L NL TG+ L ++ +L
Sbjct: 490 HLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLMHLTSLVNLRQ 549
Query: 236 LNLS 239
L LS
Sbjct: 550 LVLS 553
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 66 NAEAIELRGE--NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS 123
N + L G+ N DA +A+L L+ LN+ C ++T L L + L+ L+L
Sbjct: 344 NLRHLNLSGDMSNLTDAG-LAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLH 402
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPV--TDLV 180
C K+TDAG+ HL + L+ L LS+ LT G+A L+ L NL LDL P+ T
Sbjct: 403 CCNKLTDAGLAHLRPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAG 462
Query: 181 LRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNISSL 233
L L L L+YL+L +++++ G L L L NL G+ L ++ +L
Sbjct: 463 LAYLAPLIDLQYLNLCCCNELTDIGLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNL 522
Query: 234 ECLNLSNC 241
+ LNL C
Sbjct: 523 QHLNLRCC 530
>gi|290978443|ref|XP_002671945.1| predicted protein [Naegleria gruberi]
gi|284085518|gb|EFC39201.1| predicted protein [Naegleria gruberi]
Length = 381
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 182/401 (45%), Gaps = 41/401 (10%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L+SL++ + L ++ M L LD+S K G + + + L L ++
Sbjct: 1 MQNLKSLSIV-GNGLVDEHLKEISEMKGLTLLDVSEN-KFGKEGAEKISGMVGLTTLNIN 58
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+ + +G + +++ L++L + + + R++ L L +L+L G+ + ++GA+ +
Sbjct: 59 DNYILDEGAKFIGTMKQLTLLKMKYCEIREEGARAISELKNLTFLNLHGNFIGDKGASYI 118
Query: 209 KMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
L+ LN+ T +T ++S L+ NL + I + +I G +
Sbjct: 119 SEMVNLTHLNVGSTQLTAEGARHVSGLK--NLKSLLIHT-----------NQIGHQGAKW 165
Query: 267 INEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
I+ + + L+ LDVS +S+ +L++M L HLD+ S+ +G +E + +
Sbjct: 166 ISTMK-----DLEGLTSLDVSGNSILDQGVQYLSEMSNLTHLDIGSNHVGVKGIESIIGM 220
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
L +LN+S+ S+G +++G + NL L++S ++ ++ M ++ + I N
Sbjct: 221 -KGLISLNVSSNDLGSSGAKLISG-MSNLTSLNISANRLLGEGAKFIGEMHNVTILVIRN 278
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
DI G E + + L+ LN ++S +S K+L L +
Sbjct: 279 NDI-------GDEGAKFIC-----KMKQLKSLNAVYNRISSKGFESISEMKQLTSLDIGY 326
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL---GSFKPP 482
S+ + L LT+L++R ++ + GL G K P
Sbjct: 327 NSIDSKGAKSVRKLKNLTSLNVRSNMIDDEGLKAIGQLKIP 367
>gi|171912739|ref|ZP_02928209.1| Leucine-rich repeat [Verrucomicrobium spinosum DSM 4136]
Length = 443
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 164/343 (47%), Gaps = 39/343 (11%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
I LS+L L L+L VTD + LQ L L+ LDL+ + VS+ L L
Sbjct: 121 IEPLSALSQLQCLELCQTQVTDF--KPLQRLGALQQLDLYSTSVSD--LEPLAALHALQQ 176
Query: 217 LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF--INEREAFL 274
LN+ T VT L ++ L L N + + E + PLAKI TT + R A +
Sbjct: 177 LNICSTKVTDLEPLAGLSSLRQFNFSFTGVTELD----PLAKI----TTLQQLEFRLAPI 228
Query: 275 YIETSL-----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
+ +L L LD+S + + L+ + AL+ L + + + D + +A + A LR
Sbjct: 229 FDLDALAGLRELQKLDLSTTEVRDLEPLSGLGALQKLYFNHTAVSD--LGPLAGLSA-LR 285
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
L+L R + +G LAG L L+ L L+ TQ+ D ++ ++ + +L+ +D+S T +
Sbjct: 286 KLDLRCARRVT-DIGPLAG-LHALQRLILASTQVTD--LTPLTELRNLQHLDLSRTKVSD 341
Query: 390 F--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 441
++ +G + V L L L+RL L+ TQVSD L P++ L L
Sbjct: 342 LSPLTSLTALRSLGLTSTQVSDLAPLAAYRDLQRLFLDSTQVSD--LGPVAGMNSLQELY 399
Query: 442 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
+ + S+TD L L+ L++L LS+ D NS + P S
Sbjct: 400 VSHTSVTD--LGPLAGLTELKRLSV-DECAVNSMPPTISPNES 439
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 169/359 (47%), Gaps = 63/359 (17%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ +EL D + + LGA + L D + S L L + L++L++ K
Sbjct: 131 QCLELCQTQVTDFKPLQRLGALQQL------DLYSTSVSDLEPLAALHALQQLNIC-STK 183
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTA-DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
VTD ++ L +S+L + S TG+T D +A +++LQ L + P+ DL +L
Sbjct: 184 VTD--LEPLAGLSSLRQFNFSFTGVTELDPLAKITTLQQL---EFRLAPIFDL--DALAG 236
Query: 187 LTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
L +L+ LDL ++V + + L +L F + A + + L +S+L L+L C
Sbjct: 237 LRELQKLDLSTTEVRDLEPLSGLGALQKLYFNHTAVSDLGPLAGLSALRKLDL-RCA--- 292
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+ PLA + L L ++++ ++ LT+++ L+H
Sbjct: 293 --RRVTDIGPLAGLHA-------------------LQRLILASTQVTDLTPLTELRNLQH 331
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LDLS + + D + + + A LR+L L++T+ S + LA + +L+ L L TQ+ D
Sbjct: 332 LDLSRTKVSD--LSPLTSLTA-LRSLGLTSTQVSD--LAPLAAYR-DLQRLFLDSTQVSD 385
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
+ ++ M SL+ + +S+T + TD L L L L+RL++++ V+
Sbjct: 386 --LGPVAGMNSLQELYVSHTSV----------TD----LGPLAGLTELKRLSVDECAVN 428
>gi|124004060|ref|ZP_01688907.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123990639|gb|EAY30119.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 577
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 168/353 (47%), Gaps = 46/353 (13%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ DGI L NL LDL +T L S L LEYLDL G+Q++ + ++
Sbjct: 79 VVPDGIG---KLNNLGGLDLSHNQLTTLP-ESFGKLVNLEYLDLSGAQLTTFPESFSELV 134
Query: 212 PRLSFLNLAWTGVTKLP----NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
L L L+ T + P + +L+ L LS+ + ++ + + L ++ L+ T I
Sbjct: 135 -NLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLSNTQLI 193
Query: 268 NEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
E+F + L +LD+S + L+ ++ LE+LDLS + + D V
Sbjct: 194 TLPESFDKLVN--LEYLDLSGTQLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGELV-- 249
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL++L LS+T+ + G L NL+ L LS TQ+ D S+ ++ +L+ + +SNT
Sbjct: 250 NLQDLYLSDTQLTDLPESF--GELVNLQRLYLSNTQLTDLPESFGELV-NLQDLYLSNTQ 306
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS---LR 443
+ TDL S L N L+RLNL TQ+ T P +F EL++L L
Sbjct: 307 L----------TDLPESFDKLVN---LQRLNLSSTQL---TALP-ESFGELVNLQRLYLS 349
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL-KLLDLHGGWL 495
N LT + S KL NL +D L+N L + P S KL++L +L
Sbjct: 350 NTQLTALP----ESFDKLVNL--QDLYLSNIQLTAL--PESFDKLVNLQHLYL 394
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 178/377 (47%), Gaps = 44/377 (11%)
Query: 142 LEKLWLSETGLTADGIALLSS---LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
LE+L+LS T L I L S L NL LDL G +T L S L LEYLDL G+
Sbjct: 182 LERLYLSNTQL----ITLPESFDKLVNLEYLDLSGTQLTTLP-ESFDKLVNLEYLDLSGT 236
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----NISSLECLNLSNCTIDSILEGNENKA 254
Q+++ + ++ L L L+ T +T LP + +L+ L LSN + + E
Sbjct: 237 QLTDLPESFGELV-NLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPESFGELV 295
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMI 313
L + L+ T + E+F + L L++S++ L+ ++ L+ L LS++ +
Sbjct: 296 NLQDLYLSNTQLTDLPESFDKLVN--LQRLNLSSTQLTALPESFGELVNLQRLYLSNTQL 353
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
V NL++L LSN + ++ L NL+ L LS TQ+ S+ +
Sbjct: 354 TALPESFDKLV--NLQDLYLSNIQLTALPESF--DKLVNLQHLYLSDTQLTALPESFDKL 409
Query: 374 MPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQ---------NLNHLERLNLEQTQV 423
+ +L+ + +S+T + + G +L L+L++ Q L +L+ LNL TQ+
Sbjct: 410 V-NLQHLYLSDTQLTALPESFGELVNLQHLNLSSTQLTALPESFGELVNLQHLNLSSTQL 468
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQL-SSLSKLTNLSIRDAVLTNSGLG----S 478
T P +F EL++ L+N L++ L L S +L NL D L+N+ S
Sbjct: 469 ---TTLP-ESFGELVN--LQNLDLSNTQLTTLPKSFGELVNLQNLD--LSNTQFTTLPES 520
Query: 479 FKPPRSLKLLDLHGGWL 495
F +LK LDL L
Sbjct: 521 FDELVNLKTLDLSNNQL 537
>gi|401426392|ref|XP_003877680.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493926|emb|CBZ29217.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 811
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 179/404 (44%), Gaps = 73/404 (18%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTC-LKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ LR L++ +C+ WA C L+ + LS C V DA + HL + +E+L L
Sbjct: 282 LQKLRRLDMTNCK---GDFDWAGVARCCFLRSVHLSGC-NVKDADVPHLAQLPCVEELLL 337
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
S T +T + L++ + L ++ L V + LQ L L LDL + VS+
Sbjct: 338 SRTRIT--NVQALATGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSD--VNC 393
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
L L +LNLA T VT +E A L+++
Sbjct: 394 LGQSQSLIYLNLAKTHVT------------------------SEGIADLSRL-------- 421
Query: 268 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 327
L +E L ++N+++ FL + +L+ L L S+++ ++E +
Sbjct: 422 ------LTLE-----HLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAALEGFGRL-QT 469
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L++L+L++TR ++ H NL L L G+ +D I+ + +P L+ + +S TD+
Sbjct: 470 LQDLSLAHTRVTNV---TELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRVLLLSKTDV 526
Query: 388 KGFIQQVGAETDLVLSLTALQNLN-HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
A +L+L +L+ L R+N + F ++ L +++L +
Sbjct: 527 --------ASLELILQSASLEQLEVKFSRVN------EKSAFFGVTKASALTYVTLTHCD 572
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
++D+ + L +L L++ + +T+ G+ +SL+ +DL
Sbjct: 573 VSDI--NNLGMCKELRLLNVWSSKVTSEGIAGLCDAKSLQEVDL 614
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 187/430 (43%), Gaps = 45/430 (10%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
D +W A + +LRS++++ C V + + L + C++EL LSR ++T+ ++ L +
Sbjct: 296 DFDW-AGVARCCFLRSVHLSGCN-VKDADVPHLAQLPCVEELLLSR-TRITN--VQALAT 350
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L + LS + +DGI L +L L+ LDL V+D + L L YL+L +
Sbjct: 351 GKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSD--VNCLGQSQSLIYLNLAKT 408
Query: 199 QVSNRGAAVLKMFPRLSFL---NLAWTGVTKLPNISSLECLNLSNCTIDS-ILEGNENKA 254
V++ G A L L L N V+ L SL+ L+L + +DS LEG
Sbjct: 409 HVTSEGIADLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAALEGFGRLQ 468
Query: 255 PLAKISLAGTTFINERE------------AFLYIETSLLSFLD---------VSNSSLSR 293
L +SLA T N E +++ + ++ L+ +S + ++
Sbjct: 469 TLQDLSLAHTRVTNVTELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRVLLLSKTDVAS 528
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
+ Q +LE L++ S + + S + L + L++ S G L
Sbjct: 529 LELILQSASLEQLEVKFSRVNEKSAFFGVTKASALTYVTLTHCDVSDINN---LGMCKEL 585
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLT 405
+L++ +++ I+ + SL+ +D++ T + IQ + V SL
Sbjct: 586 RLLNVWSSKVTSEGIAGLCDAKSLQEVDLAETAVTDIGPLLSCTKIQALILYKSSVRSLD 645
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
+ L L RL++ +T VS ++ LS + L L+L N ++ D + L +S
Sbjct: 646 GIGALQRLRRLDIAETPVS--SIRSLSACQSLEILNLSNTAVDDDGFQGIGQAQSLKVVS 703
Query: 466 IRDAVLTNSG 475
+ +T G
Sbjct: 704 MSFTAITQLG 713
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 154/356 (43%), Gaps = 48/356 (13%)
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
+L+ L L T + + + LQ L L L VT++ LQ L LDL GS V
Sbjct: 445 SLKTLSLQSTLVDSAALEGFGRLQTLQDLSLAHTRVTNVT--ELQHCHNLWRLDLQGSFV 502
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNL--SNCTIDSILEGNENKAP 255
G A L+ P+L L L+ T V L I +SLE L + S S G +
Sbjct: 503 DQAGIAGLERLPKLRVLLLSKTDVASLELILQSASLEQLEVKFSRVNEKSAFFGVTKASA 562
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLDLSSSMI 313
L ++L + + E LL+ V++ ++ C K+L+ +DL+ + +
Sbjct: 563 LTYVTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLC---DAKSLQEVDLAETAV 619
Query: 314 GD-----------------DSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLE 354
D SV + +GA LR L+++ T SS + L+ +LE
Sbjct: 620 TDIGPLLSCTKIQALILYKSSVRSLDGIGALQRLRRLDIAETPVSS--IRSLSA-CQSLE 676
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK--------GFIQQVGAETDLVLS--L 404
IL+LS T +DD + SLK + +S T I ++++ A++ V S L
Sbjct: 677 ILNLSNTAVDDDGFQGIGQAQSLKVVSMSFTAITQLGQLGQCSHLEELYAQSCPVTSEGL 736
Query: 405 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
L+ L +LNL T++ + L+ ++L+ L N T+V +++ + +
Sbjct: 737 VGLEKACCLAKLNLSYTKIQGG-IQRLTNCRKLLKL---NVKFTEVPYDEVAYVKR 788
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 123/300 (41%), Gaps = 70/300 (23%)
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID--SIL-----EGNEN---KAPLAKIS 260
PRL LA S +E L L N T+ S+L EG N P ++
Sbjct: 226 LPRLQMFALA----------SRIEELVLDNVTVHPHSVLAIGNAEGQGNGQAPPPSNRVP 275
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSN-------SSLSRFCFLTQMKALEHLDLSSSMI 313
L+ F+ + L LD++N + ++R CFL + LS +
Sbjct: 276 LSDLVFLQK-----------LRRLDMTNCKGDFDWAGVARCCFL------RSVHLSGCNV 318
Query: 314 GDDSVEMVA---CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
D V +A CV L LS TR ++ V LA L I+ LS Q+D I
Sbjct: 319 KDADVPHLAQLPCV----EELLLSRTRITN--VQALATG-KGLRIIQLSNAQVDSDGIDG 371
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
+ +P L +D+S+T LV + L L LNL +T V+ +
Sbjct: 372 LQTLPYLTRLDLSST--------------LVSDVNCLGQSQSLIYLNLAKTHVTSEGIAD 417
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
LS L HL L N ++ DVS L+ L LS++ ++ ++ L F ++L+ L L
Sbjct: 418 LSRLLTLEHLMLNNNNIRDVSF--LAESHSLKTLSLQSTLVDSAALEGFGRLQTLQDLSL 475
>gi|290985427|ref|XP_002675427.1| predicted protein [Naegleria gruberi]
gi|284089023|gb|EFC42683.1| predicted protein [Naegleria gruberi]
Length = 324
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 159/367 (43%), Gaps = 52/367 (14%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
MK L S L +S G+ D L+S ++ L L++G + D + + + +L
Sbjct: 1 MKQLTS------LDISGNGI-GDEAKLISEMKQLISLNIGKNEIGDEEAKLISEMKQLTS 53
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNCTIDSIL 247
L++ + + + GA ++ +L+ LN+ G L + L LN+ C
Sbjct: 54 LNISDNLIGDEGAKLISEMKQLTSLNICCNRIGVEGAKYLSEMKQLISLNI--C------ 105
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEH 305
EN+ I + A L ET L+ L++ + + F+++MK L
Sbjct: 106 ---ENE-------------IGDEGAKLISETRQLTSLNIGFTQIGGEGAKFISEMKQLTS 149
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LD+S ++IG + + ++ + L +LN+S+ G +++ + L L++S QI
Sbjct: 150 LDISDNLIGVEGAKFISEM-KQLTSLNISDNLIGDEGAKLIS-EMKQLTSLNISNNQIGG 207
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
+ +S M L +DISN Q+G E ++S + L LN+ ++ D
Sbjct: 208 EGVKLISEMKQLTSLDISNN-------QIGDEGAKLIS-----EMKQLTSLNISGNRIGD 255
Query: 426 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 485
+S K+L L + + D +S + +L +L+IR + + G+ + + L
Sbjct: 256 EGAKSMSEMKQLKSLDISYNQIGDEGTKLISEMKQLISLNIRANRIGDEGVKYIREMKQL 315
Query: 486 KLLDLHG 492
L G
Sbjct: 316 TSLTYKG 322
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 138/311 (44%), Gaps = 35/311 (11%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G+N + E + + L SLN++D + ++ M L L++ C ++ G
Sbjct: 33 GKNEIGDEEAKLISEMKQLTSLNISD-NLIGDEGAKLISEMKQLTSLNIC-CNRIGVEGA 90
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K+L + L L + E + +G L+S + L+ L++G + + + + +L L
Sbjct: 91 KYLSEMKQLISLNICENEIGDEGAKLISETRQLTSLNIGFTQIGGEGAKFISEMKQLTSL 150
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE 248
D+ + + GA + +L+ LN++ G + + L LN+SN I
Sbjct: 151 DISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQLTSLNISNNQI----- 205
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHL 306
G E G I+E + L+ LD+SN+ + +++MK L L
Sbjct: 206 GGE-----------GVKLISEMKQ--------LTSLDISNNQIGDEGAKLISEMKQLTSL 246
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
++S + IGD+ + ++ + L++L++S + G +++ + L L++ +I D
Sbjct: 247 NISGNRIGDEGAKSMSEM-KQLKSLDISYNQIGDEGTKLIS-EMKQLISLNIRANRIGDE 304
Query: 367 AISYMSMMPSL 377
+ Y+ M L
Sbjct: 305 GVKYIREMKQL 315
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 108/244 (44%), Gaps = 16/244 (6%)
Query: 271 EAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 328
EA L E L L++ + + +++MK L L++S ++IGD+ ++++ + L
Sbjct: 17 EAKLISEMKQLISLNIGKNEIGDEEAKLISEMKQLTSLNISDNLIGDEGAKLISEM-KQL 75
Query: 329 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 388
+LN+ R G L+ + L L++ +I D +S L ++I T I
Sbjct: 76 TSLNICCNRIGVEGAKYLS-EMKQLISLNICENEIGDEGAKLISETRQLTSLNIGFTQIG 134
Query: 389 G----FIQQVGAETDLVLS--LTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 436
G FI ++ T L +S L ++ + L LN+ + D +S K+
Sbjct: 135 GEGAKFISEMKQLTSLDISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQ 194
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 496
L L++ N + + +S + +LT+L I + + + G + L L++ G +
Sbjct: 195 LTSLNISNNQIGGEGVKLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTSLNISGNRIG 254
Query: 497 TEDA 500
E A
Sbjct: 255 DEGA 258
>gi|343419347|emb|CCD19427.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1478
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 201/432 (46%), Gaps = 72/432 (16%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ ++ L+ DLS C +TD + L ++S L
Sbjct: 440 VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTFDLSHCTGITD--VSPLSTLSGL 495
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVS 201
E L LS A G+ L SL+ L L L L + D VLR + VL L LDL + ++
Sbjct: 496 EVLNLSGCTGVASGVDSLCSLRMLRELRLSRLAINDAVLRDIVVLKCLRTLDLSHCTGIT 555
Query: 202 NRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
N + L L LNL+ T ++ L +++ + LNLS CT G + +PL+
Sbjct: 556 N--VSPLSTLSGLEVLNLSGCADITDISPLSDLNIMHTLNLSFCT------GITDVSPLS 607
Query: 258 KIS------LAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKALEHLDLS- 309
K+S L T I + I S L LD+S+ + ++ L+ + L LDLS
Sbjct: 608 KLSRLETLNLMYCTGITDVSPLSLI--SNLRTLDLSHCTGITDVSPLSLISNLRTLDLSH 665
Query: 310 ----------SSMIGDDSVEMVACVG----------ANLRNLNLSNTRFSSAGVGILA-- 347
S +I + +++ C G + L LNL G+ ++
Sbjct: 666 CTGITDVPPLSMLIRLEKLDLSGCTGITDVSPLSKLSRLETLNL----MYCTGITDVSPL 721
Query: 348 GHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAET-DL- 400
L LE L+L T I D +S +S M SL +++S TD+ + ET DL
Sbjct: 722 SKLSRLETLNLMYCTGITD--VSPLSKMSSLYTLNLSYCTGITDVSPLSMLIRLETLDLT 779
Query: 401 ----VLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQ 454
+ ++ L L+ LE LNL T ++D + PLS L L+L + +TDVS
Sbjct: 780 GCTGITDVSPLSKLSRLETLNLRYCTGITDVS--PLSKLSRLETLNLMYCTGITDVS--P 835
Query: 455 LSSLSKLTNLSI 466
LS LS+L L++
Sbjct: 836 LSKLSRLETLNL 847
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 188/404 (46%), Gaps = 63/404 (15%)
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL 174
CL+ LDLS C +TD + L +S+L L LS TG+T ++ LS L +L DL
Sbjct: 425 CLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGIT--DVSPLSKLSSLRTFDLSHC 480
Query: 175 P-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGA---AVLKMFPRLSFLNLAWTGVTKLPNI 230
+TD + L L+ LE L+L G G L+M L LA L +I
Sbjct: 481 TGITD--VSPLSTLSGLEVLNLSGCTGVASGVDSLCSLRMLRELRLSRLAINDAV-LRDI 537
Query: 231 SSLEC---LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
L+C L+LS+CT G N +PL+ +L+G +N + S LS L++
Sbjct: 538 VVLKCLRTLDLSHCT------GITNVSPLS--TLSGLEVLNLSGCADITDISPLSDLNIM 589
Query: 288 NSSLSRFCF-------LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
++ FC L+++ LE L+L G V ++ + +NLR L+LS+
Sbjct: 590 HTLNLSFCTGITDVSPLSKLSRLETLNLMYC-TGITDVSPLSLI-SNLRTLDLSH----C 643
Query: 341 AGVGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
G+ ++ + NL L LS T I D + +SM+ L+ +D+S
Sbjct: 644 TGITDVSPLSLISNLRTLDLSHCTGITD--VPPLSMLIRLEKLDLSG---------CTGI 692
Query: 398 TDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQ 454
TD ++ L L+ LE LNL T ++D + PLS L L+L + +TDVS L +
Sbjct: 693 TD----VSPLSKLSRLETLNLMYCTGITDVS--PLSKLSRLETLNLMYCTGITDVSPLSK 746
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
+SSL L NLS + S L L+ LDL G +T+
Sbjct: 747 MSSLYTL-NLSYCTGITDVSPLSMLI---RLETLDLTGCTGITD 786
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 196/426 (46%), Gaps = 64/426 (15%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E ++L G + ++ L L +LN+ C +T + L+ ++ L+ L+L C
Sbjct: 682 EKLDLSGCTGITD--VSPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNLMYCTG 737
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQ 185
+TD + L +S+L L LS TG+T ++ LS L L LDL G +TD+ L
Sbjct: 738 ITD--VSPLSKMSSLYTLNLSYCTGIT--DVSPLSMLIRLETLDLTGCTGITDV--SPLS 791
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSN 240
L++LE L+L + + +++ + L RL LNL + T V+ L +S LE LNL
Sbjct: 792 KLSRLETLNLRYCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLNLMY 849
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC--FL 297
CT G + +PL+ IS N R L T + DVS SL S C +L
Sbjct: 850 CT------GITDVSPLSLIS-------NLRTLDLSHCTGI---TDVSPLSLMSNLCSLYL 893
Query: 298 TQMKALEHLDLSSSMIGDDSVEMVACVG----------ANLRNLNLSNTRFSSAGVGILA 347
+ + + S +I + +++ C G + L LNL G+ ++
Sbjct: 894 SHCTGITDVPPLSMLIRLEKLDLSGCTGITDVSPLSKLSRLETLNL----MYCTGITDVS 949
Query: 348 --GHLPNLEILSL-SGTQIDDYA-ISYMSMMPSLKFIDISN-TDI---KGFIQQVGAETD 399
L LE L+L T I D + +S +S + +L + + TD+ FI +
Sbjct: 950 PLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLNLMYCTGITDVSPLSDFINLRTLDLS 1009
Query: 400 LVLSLTALQNLNHLERL-NLEQTQVSDAT-LFPLSTFKELIHLSLRNAS-LTDVS-LHQL 455
+T + L+ L RL NL + ++ T + PLST L L L + +TDVS L +L
Sbjct: 1010 FYTGITDVSPLSMLIRLENLSLSNIAGITDVSPLSTLIRLNVLYLSGCTGITDVSPLSKL 1069
Query: 456 SSLSKL 461
SSL L
Sbjct: 1070 SSLRTL 1075
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 200/443 (45%), Gaps = 68/443 (15%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E ++L G + ++ L L +LN+ C +T + L+ ++ L+ L+L C
Sbjct: 912 EKLDLSGCTGITD--VSPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNLMYCTG 967
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQ 185
+TD + L +S LE L L TG+T ++ LS NL LDL +TD+ L
Sbjct: 968 ITD--VSPLSKLSRLETLNLMYCTGIT--DVSPLSDFINLRTLDLSFYTGITDV--SPLS 1021
Query: 186 VLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLNLA-WTGVT---KLPNISSLECLNLSN 240
+L +LE L L S ++ + L RL+ L L+ TG+T L +SSL L+LS+
Sbjct: 1022 MLIRLENLSL--SNIAGITDVSPLSTLIRLNVLYLSGCTGITDVSPLSKLSSLRTLDLSH 1079
Query: 241 CTIDSILEGNENKAPLAKIS---------LAGTTFINEREAFLYIETSLLS----FLDVS 287
CT G + +PL+K+S G T ++ + T LS DVS
Sbjct: 1080 CT------GITDVSPLSKLSRLETLNLMYCTGITDVSPLSLISNLRTLDLSHCTGITDVS 1133
Query: 288 NSSL-SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG-------ANLRNLNLSNTR 337
SL S C +L+ + + S +I + +++ C G + L L N
Sbjct: 1134 PLSLMSNLCSLYLSHCTGITDVPPLSMLIRLEKLDLSGCTGITDVSPLSKLSRLETLNLM 1193
Query: 338 FSSAGVGILAGHL-PNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN----TDIKGFI 391
+ + + L NL L LS T I D +S +SM+ L+ +D+S TD+
Sbjct: 1194 YCTGITDVSPLSLMSNLCSLYLSHCTGITD--VSPLSMLIRLEKLDLSGCTGITDVSPLS 1251
Query: 392 QQVGAET------DLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 444
+ ET + ++ L L+ LE LNL T ++D + PLS L L L +
Sbjct: 1252 KLSRLETLNLMYCTGITDVSPLSKLSRLETLNLMYCTGITDVS--PLSLMSNLCSLYLSH 1309
Query: 445 AS-LTDVSLHQLSSLSKLTNLSI 466
+ +TDV LS LS+L L++
Sbjct: 1310 CTGITDVP--PLSKLSRLETLNL 1330
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E ++L G + ++ L L +LN+ C +T + +L M+ L L LS C
Sbjct: 1165 EKLDLSGCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSL--MSNLCSLYLSHCTG 1220
Query: 128 VTDAGMKHLLSISTLEKLWLSE-TGLT-ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+TD +L LEKL LS TG+T ++ LS L+ L+++ G +TD+ L
Sbjct: 1221 ITDVSPLSMLI--RLEKLDLSGCTGITDVSPLSKLSRLETLNLMYCTG--ITDV--SPLS 1274
Query: 186 VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLP---NISSLECLNLSN 240
L++LE L+L + + +++ + L + L L L+ TG+T +P +S LE LNL
Sbjct: 1275 KLSRLETLNLMYCTGITD--VSPLSLMSNLCSLYLSHCTGITDVPPLSKLSRLETLNLMY 1332
Query: 241 CTIDSILEGNENKAPLAKIS 260
CT G + +PL+K+S
Sbjct: 1333 CT------GITDVSPLSKLS 1346
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L L +LN+ C +T + L+ ++ L+ L+L C +TD L IS L L
Sbjct: 1319 LSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSL--ISNLRTL 1374
Query: 146 WLSE-TGLT-ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
LS TG+T ++L+S+L +L + G +TD+ L +L +LE DL G
Sbjct: 1375 DLSHCTGITDVSPLSLMSNLCSLYLSHCTG--ITDV--PPLSMLIRLEKSDLSGCT-GIT 1429
Query: 204 GAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSNCT 242
+ L RL LNL + T V+ L +S LE LNL CT
Sbjct: 1430 DVSPLSKLSRLETLNLMYCTGITDVSPLSKVSRLETLNLMYCT 1472
>gi|307108381|gb|EFN56621.1| hypothetical protein CHLNCDRAFT_57520 [Chlorella variabilis]
Length = 790
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 159/369 (43%), Gaps = 59/369 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ LGA L SL + C R+ AL L G+T L++LDLS C ++T G+ L S+ L
Sbjct: 448 LSGLGALHRLTSLCMRGCDRLADGALDFLPGLTSLRQLDLSGCKELTADGLAPLSSLRLL 507
Query: 143 EKLWLSE-TGL-TADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ 199
L L +GL A + LS+L +L+ L+LGG + LR+L L+ L L L G
Sbjct: 508 ACLRLQHCSGLRGAAALRPLSTLSSLTALNLGGCTAIHGQSLRALGTLSALRQLSLEGC- 566
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKL-PNISSLECLNLSNCT--IDSILEGNENKAPL 256
RG +L G+ L P++ L LNL C+ D+ L+ L
Sbjct: 567 ---RGVVLLD------------AGLEALAPSLHRLTSLNLQGCSTLTDAGLQKMGPLTGL 611
Query: 257 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 316
++L+ I A + +M L L L +S DD
Sbjct: 612 VSLNLSECPSITGAGAAAW-----------------------RMPLLASLQLQNSPGVDD 648
Query: 317 SVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMM 374
+ LR+LNL R G+ +A L L L L G +++ D ++ + +
Sbjct: 649 AGLAALAGLTALRSLNLKQCKRVGDGGLAAMAPALQRLTALCLQGMSEVTDAGVAQLGAL 708
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLST 433
SL+ +++ F Q G + AL L+ L RL+L + +++D +L L
Sbjct: 709 RSLQDLELQ------FAWQFGDA-----GIAALTRLSALSRLDLMYSWKITDDSLRSLGR 757
Query: 434 FKELIHLSL 442
L+ L++
Sbjct: 758 MTSLLSLNV 766
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 196/460 (42%), Gaps = 79/460 (17%)
Query: 97 VADCRRVTS---SALWALTGMTCLKELDLSRCVKVTD--AGMKHLLSISTLEKLWLSET- 150
+ C RV++ L A+ L+ LD++ C VTD G L + L +L L
Sbjct: 329 LGGCSRVSTVGDGVLEAVARCRGLRALDMAGCTGVTDEGTGFTQLSRLQQLSELNLKGCY 388
Query: 151 GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV-- 207
L DG+ LL +L++L+ L+L VTD L L LT+LE L+L G + GA
Sbjct: 389 SLADDGLELLPTLRSLAALNLQECWQVTDRGLAHLSGLTRLEDLNLQGCRNLANGAGQSL 448
Query: 208 --LKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNC---TIDSILEGNENKAPL 256
L RL+ L LA + LP ++SL L+LS C T D + APL
Sbjct: 449 SGLGALHRLTSLCMRGCDRLADGALDFLPGLTSLRQLDLSGCKELTADGL-------APL 501
Query: 257 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF----LTQMKALEHLDLSS-S 311
+ + L L+ L + + S R L+ + +L L+L +
Sbjct: 502 SSLRL-------------------LACLRLQHCSGLRGAAALRPLSTLSSLTALNLGGCT 542
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTR---FSSAGVGILAGHLPNLEILSLSG-TQIDDYA 367
I S+ + + A LR L+L R AG+ LA L L L+L G + + D
Sbjct: 543 AIHGQSLRALGTLSA-LRQLSLEGCRGVVLLDAGLEALAPSLHRLTSLNLQGCSTLTDAG 601
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH--------------- 412
+ M + L +++S I GA + L +LQ N
Sbjct: 602 LQKMGPLTGLVSLNLSECP---SITGAGAAAWRMPLLASLQLQNSPGVDDAGLAALAGLT 658
Query: 413 -LERLNLEQTQ-VSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRD 468
L LNL+Q + V D L ++ + L L L+ S +TD + QL +L L +L ++
Sbjct: 659 ALRSLNLKQCKRVGDGGLAAMAPALQRLTALCLQGMSEVTDAGVAQLGALRSLQDLELQF 718
Query: 469 A-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
A ++G+ + +L LDL W +T+D++ +M
Sbjct: 719 AWQFGDAGIAALTRLSALSRLDLMYSWKITDDSLRSLGRM 758
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 194/490 (39%), Gaps = 65/490 (13%)
Query: 81 EW-MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
+W +A + LR +++ C VT + L + L L L CVK+TD G+ L +
Sbjct: 194 DWDLADVALLSTLRCVSLRGCEGVTDEGVAQLARLPRLSRLVLRNCVKLTDVGLARLAGV 253
Query: 140 ST--LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S L +LW + + L S G + L LDL G
Sbjct: 254 SGRELPQLWAPAGPGSPPPVPRLRSP---------GARLPAAAAPPPCRRPPLASLDLAG 304
Query: 198 SQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPL 256
++ RG A S L G +++ + D +LE L
Sbjct: 305 CVLLTERGFAAAASGLAASLTELLLGGCSRVSTVG------------DGVLEAVARCRGL 352
Query: 257 AKISLAGTTFI-NEREAFLYI-------ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 308
+ +AG T + +E F + E +L +++ L L +++L L+L
Sbjct: 353 RALDMAGCTGVTDEGTGFTQLSRLQQLSELNLKGCYSLADDGLE---LLPTLRSLAALNL 409
Query: 309 SSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG---ILAGHLPNLEILSLSGT-QI 363
+ D + ++ + L +LNL R + G G G L L L + G ++
Sbjct: 410 QECWQVTDRGLAHLSGL-TRLEDLNLQGCRNLANGAGQSLSGLGALHRLTSLCMRGCDRL 468
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
D A+ ++ + SL+ +D+S +++ A+ L L +L L L L+
Sbjct: 469 ADGALDFLPGLTSLRQLDLSG------CKELTAD-----GLAPLSSLRLLACLRLQHCSG 517
Query: 424 --SDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI---RDAVLTNSGLG 477
A L PLST L L+L ++ SL L +LS L LS+ R VL ++GL
Sbjct: 518 LRGAAALRPLSTLSSLTALNLGGCTAIHGQSLRALGTLSALRQLSLEGCRGVVLLDAGLE 577
Query: 478 SFKPP-RSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRT 536
+ P L L+L G LT DA LQ KM P + CPS I G + R
Sbjct: 578 ALAPSLHRLTSLNLQGCSTLT-DAGLQ--KMGPLTGLVSLNLSECPS--ITGAGAAAWRM 632
Query: 537 SLRASLVKQK 546
L ASL Q
Sbjct: 633 PLLASLQLQN 642
>gi|290992226|ref|XP_002678735.1| predicted protein [Naegleria gruberi]
gi|284092349|gb|EFC45991.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 36/262 (13%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++ + G K + I +L +L + L A+G+ LS L+NL +L + + D + +
Sbjct: 205 QIGNDGAKFIGEIQSLTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIKDEGVVHICK 264
Query: 187 LTKLEYLDLWGSQVSNRGAAVL-KMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNC 241
L +L +LDLW ++++ G ++ K P+++ L N+ G L + L L
Sbjct: 265 LKQLTHLDLWNTEITAEGIELVSKQLPKVTHLHISINVIRDGTKFLGEMKQLTTLEADEI 324
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQ 299
+D+ EG + L K L+FL V+N+ + C +++
Sbjct: 325 ELDA--EGLKYLVGLKK----------------------LNFLSVNNNLFGAEGCKVVSE 360
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL-AGHLPNLEILSL 358
MK LE L ++ + IGD+ V+ + C +L +L L N GV +L +G+L NL L +
Sbjct: 361 MKQLEELCMNDNNIGDNGVQYL-CELKSLTSLCLWNNNIGIEGVKLLCSGNLNNLTTLDI 419
Query: 359 SGTQI---DDYAISYMSMMPSL 377
G QI D + M + L
Sbjct: 420 RGNQITKSDSHLFENMKQLTEL 441
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 175/431 (40%), Gaps = 93/431 (21%)
Query: 92 LRSLNVADCRRVTSSALWA--LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L+ + AD ++T WA + + LK L++S KV G K + + L KL +S
Sbjct: 64 LKLTHTADNTKITEFTKWAANIAQLEQLKSLEISSDHKVGYDGAKVIGQLKQLTKLDISF 123
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL--------WGSQVS 201
+ A+G + +Q L+ L++ G +T +R + LT L YL++ G
Sbjct: 124 NTIGAEGAKFIGEMQQLTYLNIYGNSLTSEGIRFISQLTNLTYLNVRFNEDFRFGGHDKG 183
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL 261
GA L+ +L+ L++ + + GN+
Sbjct: 184 LEGAQYLRNLQKLTSLDIGYNQI------------------------GND---------- 209
Query: 262 AGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVE 319
G FI E ++ L+ L + N++L +L+++K L L ++++ I D+ V
Sbjct: 210 -GAKFIGEIQS--------LTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIKDEGVV 260
Query: 320 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS------GT------------ 361
+ C L +L+L NT ++ G+ +++ LP + L +S GT
Sbjct: 261 HI-CKLKQLTHLDLWNTEITAEGIELVSKQLPKVTHLHISINVIRDGTKFLGEMKQLTTL 319
Query: 362 -----QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
++D + Y+ + L F+ ++N GAE V+S + LE L
Sbjct: 320 EADEIELDAEGLKYLVGLKKLNFLSVNNN-------LFGAEGCKVVS-----EMKQLEEL 367
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSL--RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
+ + D + L K L L L N + V L +L+ LT L IR +T S
Sbjct: 368 CMNDNNIGDNGVQYLCELKSLTSLCLWNNNIGIEGVKLLCSGNLNNLTTLDIRGNQITKS 427
Query: 475 GLGSFKPPRSL 485
F+ + L
Sbjct: 428 DSHLFENMKQL 438
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 15/252 (5%)
Query: 297 LTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
+ Q++ L+ L++SS +G D +++ + L L++S + G + G + L
Sbjct: 85 IAQLEQLKSLEISSDHKVGYDGAKVIGQL-KQLTKLDISFNTIGAEGAKFI-GEMQQLTY 142
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLVLSLTALQNLNHLE 414
L++ G + I ++S + +L ++++ N D + G + L+NL L
Sbjct: 143 LNIYGNSLTSEGIRFISQLTNLTYLNVRFNEDFR-----FGGHDKGLEGAQYLRNLQKLT 197
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
L++ Q+ + + + L L++RN +L + LS L L LSI + + +
Sbjct: 198 SLDIGYNQIGNDGAKFIGEIQSLTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIKDE 257
Query: 475 GLGSFKPPRSLKLLDLHGGW--LLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPS 532
G+ + L LDL W +T + I K P++ H +S+ D G
Sbjct: 258 GVVHICKLKQLTHLDL---WNTEITAEGIELVSKQLPKVTHLH-ISINVIRDGTKFLGEM 313
Query: 533 PSRTSLRASLVK 544
T+L A ++
Sbjct: 314 KQLTTLEADEIE 325
>gi|404412424|ref|YP_006698011.1| internalin I [Listeria monocytogenes SLCC7179]
gi|404238123|emb|CBY59524.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 1783
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 380 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 434
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 435 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 468
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 469 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 524
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 525 KEFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 582
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL +L N F+ G LPNLE L +S
Sbjct: 583 VIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDN 642
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 643 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNN 694
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 695 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L +L NL
Sbjct: 313 SLATLNGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKNLPNL 369
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ + P+L L L G+T
Sbjct: 370 VNITADSCAIEDL--GTLNNLPKLQTLVLSDNENLTNITAITDL-PQLKTLTLDGCGITS 426
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L I SI E + LS+
Sbjct: 427 IGTLDNLPKLEKLDLKENQITSISE--------------------------ITDLPRLSY 460
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS ++L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 461 LDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST---LTNFPSLNYINISNNVIRTVG- 516
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 517 --KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLD 572
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + S + + +L LE N + +++ + T L L+ N S + SL
Sbjct: 573 VHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNLPDLTYVNLSFNRIPSLAP 627
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L L L + D LG+ L++LDL +L
Sbjct: 628 IGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 203/466 (43%), Gaps = 50/466 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L GE D ++ + +YL +L + S L L + L L+LS +
Sbjct: 159 LDLSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV 218
Query: 130 D-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ--V 186
+ +G++ L++ L++L +S D I+ ++SL L + G + L L++ V
Sbjct: 219 NLSGVEDLVN---LQELNVSANKALED-ISQVASLPVLKEISAQGCNIKTLELKNPAGAV 274
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCT 242
L +LE L + ++N + L P+L L N + + L + L+ ++ SNCT
Sbjct: 275 LPELETFYLQENDLTNLTS--LAKLPKLKNLYIKGNASLKSLATLNGATKLQLIDASNCT 332
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
L + L I L+G + + E TSL + ++ N + C + +
Sbjct: 333 DLETLGDISGLSELEMIQLSGCSKLKEI-------TSLKNLPNLVNITADS-CAIEDLGT 384
Query: 303 LEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
L +L +++ D+ + L+ L L +S G +LP LE L L
Sbjct: 385 LNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGT---LDNLPKLEKLDL 441
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNT------DIKG--FIQQVGAETDLVLSLTALQNL 410
QI +IS ++ +P L ++D+S D+K ++ + ++ + ++ L N
Sbjct: 442 KENQI--TSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNF 499
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL-HQLSSLSKLTNLSIRDA 469
L +N+ + T+ ++ L +N S++D+S+ H + +L K + +
Sbjct: 500 PSLNYINISNNVIR--TVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRK---VDASNN 554
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
++TN +G+F L+ LD+H + + I P +E ++
Sbjct: 555 LITN--IGTFDNLPKLQSLDVHSNRITSTSVIHDL----PSLETFN 594
>gi|290892518|ref|ZP_06555511.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
gi|290557827|gb|EFD91348.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
Length = 1775
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENKIT-------------SISEITDLP-------------RLSYLDVSVNNL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ T V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGD--LKKLPLLEWLNVSSNRLTDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 522 KEFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL ++ N F+ G LPNLE L +S
Sbjct: 580 VIHDLPSLETFNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDN 639
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 640 NSYLRSLGTMDGVPKLRILDLQN----NYLNYNGTEGN----LSSLSDLTNLTELNLRNN 691
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 692 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 728
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 206 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 260
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 380 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 437
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 438 LKENKITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLTDVST-- 492
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 493 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 546
Query: 381 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 547 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IG 601
Query: 433 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
T L ++ N S + SL + L L L + D LG+ L++LDL
Sbjct: 602 TMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 661
Query: 492 GGWL 495
+L
Sbjct: 662 NNYL 665
>gi|404406789|ref|YP_006689504.1| internalin I [Listeria monocytogenes SLCC2376]
gi|404240938|emb|CBY62338.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 1775
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENKIT-------------SISEITDLP-------------RLSYLDVSVNNL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ T V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGD--LKKLPLLEWLNVSSNRLTDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 522 KEFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL ++ N F+ G LPNLE L +S
Sbjct: 580 VIHDLPSLETFNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDN 639
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 640 NSYLRSLGTMDGVPKLRILDLQN----NYLNYNGTEGN----LSSLSDLTNLTELNLRNN 691
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 692 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 728
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 206 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 260
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 380 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 437
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 438 LKENKITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLTDVST-- 492
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 493 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 546
Query: 381 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 547 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IG 601
Query: 433 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
T L ++ N S + SL + L L L + D LG+ L++LDL
Sbjct: 602 TMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 661
Query: 492 GGWL 495
+L
Sbjct: 662 NNYL 665
>gi|386052609|ref|YP_005970167.1| internalin-I [Listeria monocytogenes Finland 1998]
gi|346645260|gb|AEO37885.1| internalin-I [Listeria monocytogenes Finland 1998]
Length = 1778
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 380 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 434
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 435 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 468
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 469 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 524
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 525 KEFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 582
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL +L N F+ G LPNLE L +S
Sbjct: 583 VIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDN 642
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 643 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNN 694
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 695 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L +L NL
Sbjct: 313 SLATLNGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKNLPNL 369
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ + P+L L L G+T
Sbjct: 370 VNITADSCAIEDL--GTLNNLPKLQTLVLSDNENLTNITAITDL-PQLKTLTLDGCGITS 426
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L I SI E + LS+
Sbjct: 427 IGTLDNLPKLEKLDLKENQITSISE--------------------------ITDLPRLSY 460
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS ++L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 461 LDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST---LTNFPSLNYINISNNVIRTVG- 516
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 517 --KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLD 572
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + S + + +L LE N + +++ + T L L+ N S + SL
Sbjct: 573 VHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNLPDLTYVNLSFNRIPSLAP 627
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L L L + D LG+ L++LDL +L
Sbjct: 628 IGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 203/466 (43%), Gaps = 50/466 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L GE D ++ + +YL +L + S L L + L L+LS +
Sbjct: 159 LDLSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV 218
Query: 130 D-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ--V 186
+ +G++ L++ L++L +S D I+ ++SL L + G + L L++ V
Sbjct: 219 NLSGVEDLVN---LQELNVSANKALED-ISQVASLPVLKEISAQGCNIKTLELKNPAGAV 274
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCT 242
L +LE L + ++N + L P+L L N + + L + L+ ++ SNCT
Sbjct: 275 LPELETFYLQENDLTNLTS--LAKLPKLKNLYIKGNASLKSLATLNGATKLQLIDASNCT 332
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
L + L I L+G + + E TSL + ++ N + C + +
Sbjct: 333 DLETLGDISGLSELEMIQLSGCSKLKEI-------TSLKNLPNLVNITADS-CAIEDLGT 384
Query: 303 LEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
L +L +++ D+ + L+ L L +S G +LP LE L L
Sbjct: 385 LNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGT---LDNLPKLEKLDL 441
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNT------DIKG--FIQQVGAETDLVLSLTALQNL 410
QI +IS ++ +P L ++D+S D+K ++ + ++ + ++ L N
Sbjct: 442 KENQI--TSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNF 499
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL-HQLSSLSKLTNLSIRDA 469
L +N+ + T+ ++ L +N S++D+S+ H + +L K + +
Sbjct: 500 PSLNYINISNNVIR--TVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRK---VDASNN 554
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
++TN +G+F L+ LD+H + + I P +E ++
Sbjct: 555 LITN--IGTFDNLPKLQSLDVHSNRITSTSVIHDL----PSLETFN 594
>gi|16802378|ref|NP_463863.1| hypothetical protein lmo0333 [Listeria monocytogenes EGD-e]
gi|386049260|ref|YP_005967251.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404282763|ref|YP_006683660.1| internalin I [Listeria monocytogenes SLCC2372]
gi|405757319|ref|YP_006686595.1| internalin I [Listeria monocytogenes SLCC2479]
gi|81849931|sp|Q8YA32.1|INLI_LISMO RecName: Full=Internalin-I; Flags: Precursor
gi|16409711|emb|CAC98412.1| lmo0333 [Listeria monocytogenes EGD-e]
gi|346423106|gb|AEO24631.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404232265|emb|CBY53668.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235201|emb|CBY56603.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 1778
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 380 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 434
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 435 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 468
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 469 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 524
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 525 KEFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 582
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL +L N F+ G LPNLE L +S
Sbjct: 583 VIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDN 642
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 643 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNN 694
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 695 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 169/401 (42%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L +L NL
Sbjct: 313 SLETLNGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKNLPNL 369
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ + P+L L L G+T
Sbjct: 370 VNITADSCAIEDL--GTLNNLPKLQTLVLSDNENLTNITAITDL-PQLKTLTLDGCGITS 426
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L I SI E + LS+
Sbjct: 427 IGTLDNLPKLEKLDLKENQITSISE--------------------------ITDLPRLSY 460
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS ++L+ L ++ LE L++SS+ + D V + + L +N+SN + G
Sbjct: 461 LDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSD--VSTLTNFPS-LNYINISNNVIRTVG- 516
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 517 --KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLD 572
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + S + + +L LE N + +++ + T L L+ N S + SL
Sbjct: 573 VHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNLPDLTYVNLSFNRIPSLAP 627
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L L L + D LG+ L++LDL +L
Sbjct: 628 IGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 203/466 (43%), Gaps = 50/466 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L GE D ++ + +YL +L + S L L + L L+LS +
Sbjct: 159 LDLSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV 218
Query: 130 D-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ--V 186
+ +G++ L++ L++L +S D I+ ++SL L + G + L L++ V
Sbjct: 219 NLSGVEDLVN---LQELNVSANKALED-ISQVASLPVLKEISAQGCNIKTLELKNPAGAV 274
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCT 242
L +LE L + ++N + L P+L L N + + L + L+ ++ SNCT
Sbjct: 275 LPELETFYLQENDLTNLTS--LAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCT 332
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
L + L I L+G + + E TSL + ++ N + C + +
Sbjct: 333 DLETLGDISGLSELEMIQLSGCSKLKEI-------TSLKNLPNLVNITADS-CAIEDLGT 384
Query: 303 LEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
L +L +++ D+ + L+ L L +S G +LP LE L L
Sbjct: 385 LNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGT---LDNLPKLEKLDL 441
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNT------DIKG--FIQQVGAETDLVLSLTALQNL 410
QI +IS ++ +P L ++D+S D+K ++ + ++ + ++ L N
Sbjct: 442 KENQI--TSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNF 499
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL-HQLSSLSKLTNLSIRDA 469
L +N+ + T+ ++ L +N S++D+S+ H + +L K + +
Sbjct: 500 PSLNYINISNNVIR--TVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRK---VDASNN 554
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
++TN +G+F L+ LD+H + + I P +E ++
Sbjct: 555 LITN--IGTFDNLPKLQSLDVHSNRITSTSVIHDL----PSLETFN 594
>gi|83592173|ref|YP_425925.1| hypothetical protein Rru_A0837 [Rhodospirillum rubrum ATCC 11170]
gi|386348881|ref|YP_006047129.1| hypothetical protein F11_04310 [Rhodospirillum rubrum F11]
gi|83575087|gb|ABC21638.1| Leucine-rich repeat [Rhodospirillum rubrum ATCC 11170]
gi|346717317|gb|AEO47332.1| leucine-rich repeat-containing protein [Rhodospirillum rubrum F11]
Length = 1085
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 168/361 (46%), Gaps = 66/361 (18%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTD + L + L+ L+LS T +T + L+ +++L L L VTDL L L
Sbjct: 84 VTD--LTPLTGLENLQGLFLSYTAVT--DLTPLTGIKSLQSLILSETQVTDLT--PLAGL 137
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 247
L+ ++L +Q+++ A L L L L++T VT L ++ LE NL + IL
Sbjct: 138 KNLQSINLSATQITD--LAPLAGLENLQNLTLSYTTVTDLAPLAGLE--NLQHL----IL 189
Query: 248 EGNE--NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
G + PLA + L LD+S + ++ L +K+L+
Sbjct: 190 LGTRVIDLTPLAGLKS-------------------LQSLDLSGTRVTNIAPLVGLKSLQS 230
Query: 306 LDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
LDL + + D + VG +L++LNLS T + + LAG L NL+ L+LS T
Sbjct: 231 LDLRRTRVTD----IAPLVGLKSLKSLQSLNLSRTPVTD--LAPLAG-LENLQNLTLSYT 283
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+ D A ++ + +L+ ID+ T+ V+ L L L +L+ ++L T
Sbjct: 284 TVTDLAP--LAGLENLQNIDLGGTE--------------VIDLAPLAGLENLQNIDLGGT 327
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 481
+V D L PL+ + L +L+L ++TD L L+ L L ++ +T+ G F
Sbjct: 328 EVID--LAPLAGLENLQNLTLSYTTVTD--LAPLAGLENLQSIDCSGCRITSVPDGLFDS 383
Query: 482 P 482
P
Sbjct: 384 P 384
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKEL---DLSRCVKVTDAGMKHLLSISTLEKLWLS 148
L+SL D RR + + L G+ LK L +LSR VTD + L + L+ L LS
Sbjct: 225 LKSLQSLDLRRTRVTDIAPLVGLKSLKSLQSLNLSR-TPVTD--LAPLAGLENLQNLTLS 281
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
T +T +A L+ L+NL +DLGG V DL L L L+ +DL G++V + A L
Sbjct: 282 YTTVT--DLAPLAGLENLQNIDLGGTEVIDLA--PLAGLENLQNIDLGGTEVID--LAPL 335
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL---NLSNCTIDSILEG 249
L L L++T VT L ++ LE L + S C I S+ +G
Sbjct: 336 AGLENLQNLTLSYTTVTDLAPLAGLENLQSIDCSGCRITSVPDG 379
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDL--S 123
N ++I L D +A L L++L ++ T + L L G+ L+ L L +
Sbjct: 139 NLQSINLSATQITD---LAPLAGLENLQNLTLS---YTTVTDLAPLAGLENLQHLILLGT 192
Query: 124 RCVKVTD-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-L 181
R + +T AG+K L S+ LS T +T IA L L++L LDL VTD+ L
Sbjct: 193 RVIDLTPLAGLKSLQSLD------LSGTRVT--NIAPLVGLKSLQSLDLRRTRVTDIAPL 244
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 241
L+ L L+ L+L + V++ A L L L L++T VT L ++ LE NL N
Sbjct: 245 VGLKSLKSLQSLNLSRTPVTD--LAPLAGLENLQNLTLSYTTVTDLAPLAGLE--NLQN- 299
Query: 242 TIDSILEGNE--NKAPLA------KISLAGTTFIN 268
ID L G E + APLA I L GT I+
Sbjct: 300 -ID--LGGTEVIDLAPLAGLENLQNIDLGGTEVID 331
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 26/145 (17%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L NL+ L LS T + D ++ ++ + SL+ + +S T V LT L
Sbjct: 93 LENLQGLFLSYTAVTD--LTPLTGIKSLQSLILSETQ--------------VTDLTPLAG 136
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRD 468
L +L+ +NL TQ++D L PL+ + L +L+L ++TD++ L L +L L L R
Sbjct: 137 LKNLQSINLSATQITD--LAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQHLILLGTRV 194
Query: 469 AVLTN-SGLGSFKPPRSLKLLDLHG 492
LT +GL +SL+ LDL G
Sbjct: 195 IDLTPLAGL------KSLQSLDLSG 213
>gi|242078575|ref|XP_002444056.1| hypothetical protein SORBIDRAFT_07g006470 [Sorghum bicolor]
gi|241940406|gb|EES13551.1| hypothetical protein SORBIDRAFT_07g006470 [Sorghum bicolor]
Length = 1010
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 181/427 (42%), Gaps = 62/427 (14%)
Query: 136 LLSISTLEKLWLSETGLTADGIAL---LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
LLS+ LE + LS LT + L S++N+ L+L G+P T V L L+ L+Y
Sbjct: 105 LLSLEYLEHMDLSSNSLTGPHGCIPQFLGSMKNMKYLNLSGIPFTGGVAPQLGNLSNLQY 164
Query: 193 LDLWGSQVSNRGAAV--LKMFPRLSFLNLAW---TGVTKLPN----ISSLECLNLSNCTI 243
LDL G Q A + L P L +L++++ +G+ P + SL + L++C++
Sbjct: 165 LDL-GRQYYLYSADITWLTNLPLLQYLDMSYVNLSGIADWPQKLNMVPSLRVIRLTSCSL 223
Query: 244 DSILE--GNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFC--FLT 298
D+ + + N L K+ L+ F + ++ + + + L +L++ N L L
Sbjct: 224 DTTNQSLSHFNLTNLEKLDLSLNNFNHPIVSSWWFWKPTGLKYLNLHNIGLIGHLQDSLE 283
Query: 299 QMKALEHLDLSS------SMIGDDS----VEMVACVG--ANLRNLNLSNTRFSSAGVGIL 346
M L LDLS+ ++ G S EM+ + +L L+LS + S + I
Sbjct: 284 NMTLLRVLDLSNNYQNCLALTGSPSNLCTFEMIGNLNNLCSLEILDLS-YNYMSGDMTIF 342
Query: 347 AGHLPN-----LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
G LP L+ L+L + + + SL + ISN ++ G I
Sbjct: 343 TGRLPQCSWDKLQHLNLDSNNLTGTLPNLIGHFISLSVLVISNNNLTGTIP--------- 393
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L N HL L+L ++S + + + +L L LRN +L+ Q+ S L
Sbjct: 394 ---AGLGNCTHLTILDLYCNKISGSVPTEIGSLSKLTSLDLRNNNLSGGVPTQIGGCSNL 450
Query: 462 TNLSIRDAVLTNSGLGS-FKPPRSLKLLDLHGG----------WLLT---EDAILQFCKM 507
T L + + L+ + F+ SLK LDL W E C+M
Sbjct: 451 TFLDVSNNYLSGVIMEEHFEGLISLKKLDLSSNKNLKVTVNRDWFPPFRLEYGNFANCQM 510
Query: 508 HPRIEVW 514
P W
Sbjct: 511 APLFPAW 517
>gi|168699408|ref|ZP_02731685.1| hypothetical protein GobsU_07802 [Gemmata obscuriglobus UQM 2246]
Length = 320
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 59/303 (19%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T + + L + L L L V VTDAG+K L + L L L+ +T G+ L+
Sbjct: 60 KMTDAGMKELAALRNLTSLKLIGPV-VTDAGLKALAPLKKLTTLQLTAAKVTDAGVKELA 118
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
SL +L+ LDL VTD ++ L LT+L LDL G++V++ G L L L+L
Sbjct: 119 SLASLTTLDLASTNVTDAGVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGS 178
Query: 222 TGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
T VT +L +++L+ L+L + K++ AG + E +
Sbjct: 179 TAVTGASLKELAPLTNLKTLHLYDT----------------KMTDAG---LKELAPLTSL 219
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
T L+ V+++ L LT +K NL +LNL T
Sbjct: 220 TTLTLAATKVTDAGLKG---LTPLK-------------------------NLSDLNLGGT 251
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI-----DISNTDIKGFI 391
+ +SAG+ LA L NL +L L T + D + ++ + +LK + ++ +K F
Sbjct: 252 KVTSAGLKELA-ALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLVGAKVTTKGVKEFK 310
Query: 392 QQV 394
V
Sbjct: 311 DAV 313
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 44/237 (18%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L +K L L L+++ + D V+ +A + A+L L+L++T + AGV LA L L L
Sbjct: 93 LAPLKKLTTLQLTAAKVTDAGVKELASL-ASLTTLDLASTNVTDAGVKELA-PLTRLTAL 150
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
LSGT++ D + ++ + +L + + +T + G SL L L +L+ L
Sbjct: 151 DLSGTKVTDAGLKELAPLKNLVTLSLGSTAVTGA------------SLKELAPLTNLKTL 198
Query: 417 NLEQT------------------------QVSDATLFPLSTFKELIHLSLRNASLTDVSL 452
+L T +V+DA L L+ K L L+L +T L
Sbjct: 199 HLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGLKGLTPLKNLSDLNLGGTKVTSAGL 258
Query: 453 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT------EDAILQ 503
+L++L LT L + +T++GL P +LK+L L G + T +DA+L+
Sbjct: 259 KELAALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLVGAKVTTKGVKEFKDAVLK 315
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL +L L + AG+ LA L L L L+ ++ D + ++ + SL +D+++T+
Sbjct: 74 NLTSLKLIGPVVTDAGLKALA-PLKKLTTLQLTAAKVTDAGVKELASLASLTTLDLASTN 132
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ TD + L L L L+L T+V+DA L L+ K L+ LSL + +
Sbjct: 133 V----------TDA--GVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGSTA 180
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+T SL +L+ L+ L L + D +T++GL
Sbjct: 181 VTGASLKELAPLTNLKTLHLYDTKMTDAGL 210
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
KVTDAG+K L + L L L T +T+ G+ L++L+NL+VLDL VTD L+ L
Sbjct: 228 KVTDAGLKGLTPLKNLSDLNLGGTKVTSAGLKELAALKNLTVLDLDVTAVTDAGLKELTP 287
Query: 187 LTKLEYLDLWGSQVSNRGA-----AVLK 209
LT L+ L L G++V+ +G AVLK
Sbjct: 288 LTNLKVLRLVGAKVTTKGVKEFKDAVLK 315
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L ++ L L L ++ D ++ +A + L L L+ + + AGV LA L +L L
Sbjct: 69 LAALRNLTSLKLIGPVVTDAGLKALAPL-KKLTTLQLTAAKVTDAGVKELA-SLASLTTL 126
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
L+ T + D + ++ + L +D+S T + TD L L L +L L
Sbjct: 127 DLASTNVTDAGVKELAPLTRLTALDLSGTKV----------TDA--GLKELAPLKNLVTL 174
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+L T V+ A+L L+ L L L + +TD L +L+ L+ LT L++ +T++GL
Sbjct: 175 SLGSTAVTGASLKELAPLTNLKTLHLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGL 234
Query: 477 GSFKPPRSLKLLDLHG 492
P ++L L+L G
Sbjct: 235 KGLTPLKNLSDLNLGG 250
>gi|284800621|ref|YP_003412486.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284993807|ref|YP_003415575.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
gi|284056183|gb|ADB67124.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284059274|gb|ADB70213.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
Length = 1778
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 380 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 434
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 435 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 468
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 469 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 524
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 525 KEFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 582
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL +L N F+ G LPNLE L +S
Sbjct: 583 VIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDN 642
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 643 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNN 694
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 695 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 169/401 (42%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L +L NL
Sbjct: 313 SLETLNGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKNLPNL 369
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ + P+L L L G+T
Sbjct: 370 VNITADSCAIEDL--GTLNNLPKLQTLVLSDNENLTNITAITDL-PQLKTLTLDGCGITS 426
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L I SI E + LS+
Sbjct: 427 IGTLDNLPKLEKLDLKENQITSISE--------------------------ITDLPRLSY 460
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS ++L+ L ++ LE L++SS+ + D V + + L +N+SN + G
Sbjct: 461 LDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSD--VSTLTNFPS-LNYINISNNVIRTVG- 516
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 517 --KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLD 572
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + S + + +L LE N + +++ + T L L+ N S + SL
Sbjct: 573 VHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNLPDLTYVNLSFNRIPSLAP 627
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L L L + D LG+ L++LDL +L
Sbjct: 628 IGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 203/466 (43%), Gaps = 50/466 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L GE D ++ + +YL +L + S L L + L L+LS +
Sbjct: 159 LDLSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV 218
Query: 130 D-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ--V 186
+ +G++ L++ L++L +S D I+ ++SL L + G + L L++ V
Sbjct: 219 NLSGVEDLVN---LQELNVSANKALED-ISQVASLPVLKEISAQGCNIKTLELKNPAGAV 274
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCT 242
L +LE L + ++N + L P+L L N + + L + L+ ++ SNCT
Sbjct: 275 LPELETFYLQENDLTNLTS--LAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCT 332
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
L + L I L+G + + E TSL + ++ N + C + +
Sbjct: 333 DLETLGDISGLSELEMIQLSGCSKLKEI-------TSLKNLPNLVNITADS-CAIEDLGT 384
Query: 303 LEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
L +L +++ D+ + L+ L L +S G +LP LE L L
Sbjct: 385 LNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGT---LDNLPKLEKLDL 441
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNT------DIKG--FIQQVGAETDLVLSLTALQNL 410
QI +IS ++ +P L ++D+S D+K ++ + ++ + ++ L N
Sbjct: 442 KENQI--TSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNF 499
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL-HQLSSLSKLTNLSIRDA 469
L +N+ + T+ ++ L +N S++D+S+ H + +L K + +
Sbjct: 500 PSLNYINISNNVIR--TVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRK---VDASNN 554
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
++TN +G+F L+ LD+H + + I P +E ++
Sbjct: 555 LITN--IGTFDNLPKLQSLDVHSNRITSTSVIHDL----PSLETFN 594
>gi|168700133|ref|ZP_02732410.1| hypothetical protein GobsU_11435 [Gemmata obscuriglobus UQM 2246]
Length = 167
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
RVT + L + L LDL VTDAG+K L + L +L L T +T G+ L+
Sbjct: 27 RVTDVGVKELAALKALTNLDLGG-TGVTDAGVKELSGLKGLTRLELRSTKITDAGVKELA 85
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
+L+NL+ LDLGG VTD + L L L LDL +QV++ G L L+ L+L
Sbjct: 86 ALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHG 145
Query: 222 TGVT 225
TGVT
Sbjct: 146 TGVT 149
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
D V+ +A + L LNL TR + GV LA L L L L GT + D + +S +
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELAA-LKALTNLDLGGTGVTDAGVKELSGL 63
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDL-VLSLTALQNLNHLERLNLEQTQVSDATLFPLST 433
L +++ +T I TD V L AL+NLNHL+ L T+V+DA LS
Sbjct: 64 KGLTRLELRSTKI----------TDAGVKELAALKNLNHLD---LGGTKVTDAGAKELSG 110
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
L+ L L N +TD + L++L+ LT L + +T++GL
Sbjct: 111 LNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVTDAGL 153
Score = 56.2 bits (134), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
AGV LA L L+L T++ D + ++ + +L +D+ T + TD
Sbjct: 6 AGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGV----------TDA 55
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+ L L L RL L T+++DA + L+ K L HL L +TD +LS L+
Sbjct: 56 --GVKELSGLKGLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNF 113
Query: 461 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L L + + +T++G+ + L LDLHG
Sbjct: 114 LVTLDLSNTQVTDAGVKALTALTGLTTLDLHG 145
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L A + L +L++ VT + + L+G+ L L+L R K+TDAG+K L ++ L L
Sbjct: 36 LAALKALTNLDLGGTG-VTDAGVKELSGLKGLTRLEL-RSTKITDAGVKELAALKNLNHL 93
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L T +T G LS L L LDL VTD +++L LT L LDL G+ V++ G
Sbjct: 94 DLGGTKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVTDAG 152
Score = 50.4 bits (119), Expect = 0.003, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K L L+L + + D V+ +A + A L NL+L T + AGV L+G L L L L
Sbjct: 16 KGLTTLNLRRTRVTDVGVKELAALKA-LTNLDLGGTGVTDAGVKELSG-LKGLTRLELRS 73
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
T+I D + ++ + +L +D+ T + GA+ L LN L L+L
Sbjct: 74 TKITDAGVKELAALKNLNHLDLGGTKVT----DAGAKE--------LSGLNFLVTLDLSN 121
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 457
TQV+DA + L+ L L L +TD L +L++
Sbjct: 122 TQVTDAGVKALTALTGLTTLDLHGTGVTDAGLKELNA 158
Score = 38.9 bits (89), Expect = 8.1, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T + + L + L LDL KVTDAG K L ++ L L LS T +T G+ L+
Sbjct: 75 KITDAGVKELAALKNLNHLDLGG-TKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKALT 133
Query: 162 SLQNLSVLDLGGLPVTDLVLRSL 184
+L L+ LDL G VTD L+ L
Sbjct: 134 ALTGLTTLDLHGTGVTDAGLKEL 156
>gi|430746800|ref|YP_007205929.1| hypothetical protein Sinac_6131 [Singulisphaera acidiphila DSM
18658]
gi|430018520|gb|AGA30234.1| hypothetical protein Sinac_6131 [Singulisphaera acidiphila DSM
18658]
Length = 270
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
++ L L R ++DA M HL ++ LE L+ + +T G+ + L L L L G+P+
Sbjct: 116 IRTLTLGRDPSISDADMVHLKGMADLEALFFDKGKITGAGLENFAGLPKLHTLSLQGIPL 175
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 231
TD LR L+ LT + L L ++++ G LK L F++L TGVT L ++S
Sbjct: 176 TDGDLRPLEALTNPDALTLDSPRITDVGLVHLKHLVPLRFISLNETGVTGAGLGNLADMS 235
Query: 232 SLECLNLSNCTIDSI 246
+LE L L + S+
Sbjct: 236 NLEILYLVKTNVSSL 250
>gi|157865941|ref|XP_001681677.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68124975|emb|CAJ02737.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 776
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 174/428 (40%), Gaps = 69/428 (16%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSS--ALWA-LTGMT--CLKELDLSRCVKVTDAGMKHLLS 138
A G LR L V DCR +T S +LW+ L + L++L LS + + + LL
Sbjct: 150 ASWGLMVRLRELTVRDCRHLTGSLPSLWSWLPNLQKLVLRQLQLSGTLPAEWSRVTSLLE 209
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ + + +T SS+++L L+L G V+ + + L L+L G+
Sbjct: 210 LEIV-----AAGDITGTLPPEWSSIKSLRTLNLEGTQVSGTLPPGWSEMKSLTNLELEGT 264
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVT-KLP----NISSLECLNLSNCTIDSIL-EGNEN 252
QVS L LNL T V+ LP +++SL LNL + L G
Sbjct: 265 QVSGTLPPGWSSIKSLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSE 324
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
L + L GT VS + R+ ++MK+L L+L +
Sbjct: 325 MKSLTSLELEGT--------------------QVSGTLPPRW---SEMKSLRTLNLEGTQ 361
Query: 313 I-GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP-------NLEILSLSGTQID 364
+ G + V+ A+LR LNL T+ S G LP +L L+L GTQ+
Sbjct: 362 VSGSLPPQWVSM--ASLRTLNLEGTQVS--------GSLPPEWVSMASLRTLNLEGTQVS 411
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
S M SL +++ T + G + +E + L LNLE TQVS
Sbjct: 412 GTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSE------------MKSLRTLNLEGTQVS 459
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
+ + L L+L ++ S + LT+L + ++ + + +S
Sbjct: 460 GSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSEMKS 519
Query: 485 LKLLDLHG 492
L+ L+L G
Sbjct: 520 LRTLNLEG 527
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 190/470 (40%), Gaps = 71/470 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
++ EW + + LR+LN+ + +V+ + + M L L+L +V+
Sbjct: 220 GTLPPEW----SSIKSLRTLNL-EGTQVSGTLPPGWSEMKSLTNLEL-EGTQVSGTLPPG 273
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
SI +L L L T ++ S+ +L L+L G V+ + + L L+L
Sbjct: 274 WSSIKSLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLEL 333
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-KLP----NISSLECLNLSNCTIDSILEGN 250
G+QVS L LNL T V+ LP +++SL LNL + L
Sbjct: 334 EGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGSLPPQWVSMASLRTLNLEGTQVSGSLPPE 393
Query: 251 E-NKAPLAKISLAGTTF-------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
+ A L ++L GT +E ++ +E L VS + R+ ++MK+
Sbjct: 394 WVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLE---LEGTQVSGTLPPRW---SEMKS 447
Query: 303 LEHLDLSSSMI-GDDSVEMVACVGANLRNLNLSNTRFSSA-----------------GVG 344
L L+L + + G E V+ A+LR LNL T+ S G
Sbjct: 448 LRTLNLEGTQVSGSLPPEWVSM--ASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQ 505
Query: 345 ILAGHLP-------NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
+ +G LP +L L+L GTQ+ M SL+ +++ T + G + +E
Sbjct: 506 V-SGTLPPRWSEMKSLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSE 564
Query: 398 TDLVLSLTALQ---------------NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
SLT+L+ + L LNLE TQVS A K L +L L
Sbjct: 565 MK---SLTSLELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGALPPGWGEMKSLTNLYL 621
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L+ + + LTNL + ++ S + SL+ LDL G
Sbjct: 622 EGTQLSGSLPTEWRGMKSLTNLYLEGTQVSGSLPPQWSSLTSLRTLDLEG 671
>gi|386042670|ref|YP_005961475.1| internalin [Listeria monocytogenes 10403S]
gi|404409572|ref|YP_006695160.1| internalin I [Listeria monocytogenes SLCC5850]
gi|345535904|gb|AEO05344.1| internalin [Listeria monocytogenes 10403S]
gi|404229398|emb|CBY50802.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 1778
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 380 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 434
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 435 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 468
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 469 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 524
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 525 KEFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 582
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL ++ N F+ G LPNLE L +S
Sbjct: 583 VIHDLPSLETFNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDN 642
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 643 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNN 694
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 695 VYID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L +L NL
Sbjct: 313 SLETLNGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKNLPNL 369
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ + P+L L L G+T
Sbjct: 370 VNITADSCAIEDL--GTLNNLPKLQTLVLSDNENLTNITAITDL-PQLKTLTLDGCGITS 426
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L I SI E + LS+
Sbjct: 427 IGTLDNLPKLEKLDLKENQITSISE--------------------------ITDLPRLSY 460
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS ++L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 461 LDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST---LTNFPSLNYINISNNVIRTVG- 516
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 517 --KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLD 572
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + S + + +L LE N + +++ + T L ++ N S + SL
Sbjct: 573 VHSNRITSTSVIHDLPSLETFNAQANLITN-----IGTMDNLPDITYVNLSFNRIPSLAP 627
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L L L + D LG+ L++LDL +L
Sbjct: 628 IGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 668
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 203/466 (43%), Gaps = 50/466 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
++L GE D ++ + +YL +L + S L L + L L+LS +
Sbjct: 159 LDLSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV 218
Query: 130 D-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ--V 186
+ +G++ L++ L++L +S D I+ ++SL L + G + L L++ V
Sbjct: 219 NLSGVEDLVN---LQELNVSANKALED-ISQVASLPVLKEISAQGCNIKTLELKNPAGAV 274
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCT 242
L +LE L + ++N + L P+L L N + + L + L+ ++ SNCT
Sbjct: 275 LPELETFYLQENDLTNLTS--LAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCT 332
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
L + L I L+G + + E TSL + ++ N + C + +
Sbjct: 333 DLETLGDISGLSELEMIQLSGCSKLKEI-------TSLKNLPNLVNITADS-CAIEDLGT 384
Query: 303 LEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
L +L +++ D+ + L+ L L +S G +LP LE L L
Sbjct: 385 LNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGT---LDNLPKLEKLDL 441
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNT------DIKG--FIQQVGAETDLVLSLTALQNL 410
QI +IS ++ +P L ++D+S D+K ++ + ++ + ++ L N
Sbjct: 442 KENQI--TSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNF 499
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL-HQLSSLSKLTNLSIRDA 469
L +N+ + T+ ++ L +N S++D+S+ H + +L K + +
Sbjct: 500 PSLNYINISNNVIR--TVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRK---VDASNN 554
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
++TN +G+F L+ LD+H + + I P +E ++
Sbjct: 555 LITN--IGTFDNLPKLQSLDVHSNRITSTSVIHDL----PSLETFN 594
>gi|398020181|ref|XP_003863254.1| hypothetical protein, unknown function [Leishmania donovani]
gi|322501486|emb|CBZ36565.1| hypothetical protein, unknown function [Leishmania donovani]
Length = 811
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 184/409 (44%), Gaps = 71/409 (17%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L + + LR L++ +C+ A + L+ + LS C V DA + HL + +
Sbjct: 276 LSDLASLQKLRRLDMTNCKGDFDCA--GIARCCFLRSVHLSGC-NVKDADVPHLAQLPCV 332
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
E+L LS T +T + L++ + L ++ L V + LQ L L LDL + VS+
Sbjct: 333 EELLLSRTRIT--NVQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSD 390
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA 262
L L +LNLA T VT +E A L+++
Sbjct: 391 --VNFLGQSQSLIYLNLAKTHVT------------------------SEGIAGLSRL--- 421
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 322
L +E L ++N+++ FL + +L+ L L S+++ +E
Sbjct: 422 -----------LTLE-----HLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLEGFG 465
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
+ L++L+L++TR +S H NL L L G+ +D I+ + +P L+ + +
Sbjct: 466 RL-QTLQDLSLAHTRVTSV---TELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRILLL 521
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD-ATLFPLSTFKELIHLS 441
S TD+ A +L+L +L E+L ++ + V++ + F ++ L ++
Sbjct: 522 SKTDV--------ASLELILKSESL------EQLEVKFSHVNEKSAFFGVTKASALTDVT 567
Query: 442 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L + ++D+ + L +L L++ + +T+ G+ RSL+ +DL
Sbjct: 568 LTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEGIAGLCEARSLQEVDL 614
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 175/411 (42%), Gaps = 57/411 (13%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR--CVKVTDAGMKHLLSISTL 142
+LG + L LN+A VTS + L+ + L+ L L+ V+ H L +L
Sbjct: 393 FLGQSQSLIYLNLAK-THVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSL 451
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+ + GL +G L +LQ+LS+ VT+L Q L LDL GS V
Sbjct: 452 QSTLVDSAGL--EGFGRLQTLQDLSLAHTRVTSVTEL-----QHCHNLWRLDLQGSFVDQ 504
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNL--SNCTIDSILEGNENKAPLA 257
G A L+ P+L L L+ T V L I SLE L + S+ S G + L
Sbjct: 505 AGIAGLERLPKLRILLLSKTDVASLELILKSESLEQLEVKFSHVNEKSAFFGVTKASALT 564
Query: 258 KISLAGTTFINEREAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
++L + + E LL+ V++ ++ C + ++L+ +DL+ + + D
Sbjct: 565 DVTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLC---EARSLQEVDLAETAVTD 621
Query: 316 -----------------DSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
SV + +GA LR L+++ T SS + L+ +LEIL
Sbjct: 622 ISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIAETPVSS--IRSLSA-CQSLEIL 678
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+LS T +DD + + SL+ + +S T I Q L +HLE L
Sbjct: 679 NLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLGQ--------------LGQCSHLEEL 724
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
+ + V+ L L L+ L+L L + +L++ KL L+++
Sbjct: 725 HAQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTNCRKLLKLNVK 774
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 182/418 (43%), Gaps = 44/418 (10%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
+LRS++++ C V + + L + C++EL LSR ++T+ ++ L + L + LS
Sbjct: 307 FLRSVHLSGCN-VKDADVPHLAQLPCVEELLLSR-TRITN--VQALAAGKGLRIIQLSNA 362
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+ +DGI L +L L+ LDL V+D+ L L YL+L + V++ G A L
Sbjct: 363 QVDSDGIDGLQTLPYLTRLDLSSTLVSDVNF--LGQSQSLIYLNLAKTHVTSEGIAGLSR 420
Query: 211 FPRLSFL---NLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGT-- 264
L L N V+ L SL+ L+L + +DS LEG L +SLA T
Sbjct: 421 LLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLEGFGRLQTLQDLSLAHTRV 480
Query: 265 -------------------TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+F+++ L L +S + ++ + + ++LE
Sbjct: 481 TSVTELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRILLLSKTDVASLELILKSESLEQ 540
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L++ S + + S + L ++ L++ S G L +L++ +++
Sbjct: 541 LEVKFSHVNEKSAFFGVTKASALTDVTLTHCDVSDINN---LGMCKELRLLNVWSSKVTS 597
Query: 366 YAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLN 417
I+ + SL+ +D++ T + IQ + V SL + L L RL+
Sbjct: 598 EGIAGLCEARSLQEVDLAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLD 657
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
+ +T VS ++ LS + L L+L N ++ D + + L +S+ +T G
Sbjct: 658 IAETPVS--SIRSLSACQSLEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLG 713
>gi|72385461|ref|XP_846398.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|25956236|emb|CAB95328.2| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 183/429 (42%), Gaps = 79/429 (18%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ LG YLR LN+ + ++S + L +L++ +++ ++ L +I TL
Sbjct: 484 VGCLGTLPYLRVLNIKE-AHISSLDFTGIGASKSLLQLNMESITGLSN--VEALANILTL 540
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDLWGS 198
EKL L TG+ A GI L +L L +LDL G + LRSL Q + L W
Sbjct: 541 EKLSLHGCTGIDA-GIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCW-- 597
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC-TIDSILEGNENKAPLA 257
KM T V+ + ++ +L LNLSNC I++ E E L
Sbjct: 598 ----------KM-----------TNVSHISSLEALNELNLSNCFGINAGWEALEKLQQL- 635
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVS-NSSLSRFCFLTQMKALEHLDLSSSMIGDD 316
+++ T I +R+ + L LD+S + L L+ + LE L+L S
Sbjct: 636 HVAILSNTHITDRDISHFSNCKNLITLDLSFCNKLLDVTALSNITTLEELNLDSC----- 690
Query: 317 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 376
+N+R G+ +L G LP L +L++ G Q++D I +S+
Sbjct: 691 ---------SNIR-----------KGLSVL-GELPRLCVLNIKGVQLEDSVI--VSLGNG 727
Query: 377 LKFIDISNTDIKGFIQQVGAETDLVL--------------SLTALQNLNHLERLNLEQTQ 422
F+ +S + KGF V ++LV + L L L L+L +TQ
Sbjct: 728 NSFVRLSLENCKGF-GDVAPLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVLDLGRTQ 786
Query: 423 VSDATLFPLSTFKE-LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 481
V D +L + T L+ L+L N S+ ++SL+ L L+I + SG F
Sbjct: 787 VDDNSLENICTCSSPLVSLNLSNCKKI-TSISAIASLTALEELNIDNCCNVTSGWNVFGT 845
Query: 482 PRSLKLLDL 490
L++ L
Sbjct: 846 LHQLRVATL 854
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 201/471 (42%), Gaps = 95/471 (20%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L S N+ D S + ++ L +L +S+C +TDA + ++ LE+L LS
Sbjct: 286 LNSTNIDD------SCVEEISACAKLSKLCISKCNNITDA--TPISQLAALEELNLSNCH 337
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLR------SLQVL-----------------T 188
+T GI L L L +LDL G+PV D L+ SL+ L T
Sbjct: 338 ITK-GIGTLGMLLRLRMLDLSGVPVEDNCLKDLCDCGSLERLNISYRIQLTDINPLSNAT 396
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE 248
+E L+L G + RG V+ P+L L++ ++LS ++DS+
Sbjct: 397 AIEELNLNGCRRITRGIGVVWALPKLRVLHMKD--------------VHLSEPSLDSVGT 442
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIET----------------------SLLSFLDV 286
G PL K+SL + I T L L++
Sbjct: 443 G----GPLVKVSLDNCAGFGDMTLLSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNI 498
Query: 287 SNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
+ +S F + K+L L++ S+ G +VE +A + L L+L AG+G
Sbjct: 499 KEAHISSLDFTGIGASKSLLQLNM-ESITGLSNVEALANI-LTLEKLSLHGCTGIDAGIG 556
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAETDL 400
L G+LP L++L LSGT D+ ++ + + ++ +++S+ T++ I + A +L
Sbjct: 557 CL-GNLPQLKMLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKMTNV-SHISSLEALNEL 614
Query: 401 VLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS 451
LS AL+ L L L T ++D + S K LI L L + L DV+
Sbjct: 615 NLSNCFGINAGWEALEKLQQLHVAILSNTHITDRDISHFSNCKNLITLDLSFCNKLLDVT 674
Query: 452 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
LS+++ L L++ GL L +L++ G L ED+++
Sbjct: 675 --ALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQL--EDSVI 721
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 195/464 (42%), Gaps = 79/464 (17%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA----GMKHLLSISTLEKLWL 147
L SLN+++C+++TS + A+ +T L+EL++ C VT G H L ++TL
Sbjct: 802 LVSLNLSNCKKITS--ISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATL----- 854
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
S T + + +S ++L+ L+L +TD+ +L +T LE L+L +G
Sbjct: 855 SNTRTNDENVRHVSECKSLNTLNLAFCKDITDVT--ALSKITMLEELNLDCCHNIRKGIE 912
Query: 207 VLKMFPRLSFLNL--AWTG------VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
L P+ L++ + G + L N SL LNL ++ N A L +
Sbjct: 913 TLGTLPKARILSMKECYMGDGYAQQCSILGNSKSLVKLNLERSRGRISVKALSNVATLEE 972
Query: 259 ISL---AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
+ L I + L + D+ N +++ +++ K+L L+LS
Sbjct: 973 LVLDHARKVCCIPSFSCLPRLRVLNLKYTDI-NGDVTKN--ISESKSLRSLNLSHCKWVT 1029
Query: 316 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILSLSGTQI---DDYA 367
D + + + N+N N GI G LP L + LS T+I D
Sbjct: 1030 DISVLSSLLTLEELNVNCCN--------GIRKGWESLGKLPLLRVAILSDTKITAKDIAC 1081
Query: 368 ISYMSMMPSLKFID---ISNTDIKGFIQQ-----VGAETDLVLSLTALQNLNHLERLNLE 419
+S + LKF +S+ + IQ V + +D + L AL L L +L
Sbjct: 1082 LSSCKKLVKLKFFQCEKLSDVTVVYKIQSLEELIVTSCSDGLKGLNALGTLPRLRFHHLR 1141
Query: 420 QTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 478
+ SD ++ + T K L+ L + LTD++ LS+++ L LS+RD G+G+
Sbjct: 1142 NVRGSDISVESIGTSKSLVRLHIEVGEELTDIT--PLSNITSLEELSLRDYRKPPEGVGT 1199
Query: 479 F-KPPR-----------------------SLKLLDLHGGWLLTE 498
K PR S+ L+L W LT+
Sbjct: 1200 LGKLPRLKSLDLGLSRISDSTLYCICLSRSITSLNLDSSWKLTD 1243
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 166/404 (41%), Gaps = 76/404 (18%)
Query: 111 LTGMTCLKELDLSR--CVK---VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
L M LK L + + C++ + + +HL +I TLE+L +++T + I +S L N
Sbjct: 222 LVNMISLKRLQMLKRLCLRSNNIDNNDGRHLFNIGTLEELAITDT-MQLTNIRGISRLTN 280
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L L+L + D + + KL L + S+ +N T T
Sbjct: 281 LKCLELNSTNIDDSCVEEISACAKLSKLCI--SKCNN------------------ITDAT 320
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 285
+ +++LE LNLSNC I T I L + LS +
Sbjct: 321 PISQLAALEELNLSNCHI--------------------TKGIGTLGMLLRLRMLDLSGVP 360
Query: 286 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
V ++ L C +LE L++S + D + + LNL+ R + G+G+
Sbjct: 361 VEDNCLKDLC---DCGSLERLNISYRIQLTDINPLSNATA--IEELNLNGCRRITRGIGV 415
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------------- 390
+ LP L +L + + + ++ + L + +S + GF
Sbjct: 416 VWA-LPKLRVLHMKDVHLSEPSLDSVGTGGPL--VKVSLDNCAGFGDMTLLSSIVTLEEL 472
Query: 391 -IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
IQ+ D++ + L L +L LN+++ +S + K L+ L++ S+T
Sbjct: 473 NIQKCA---DIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNME--SITG 527
Query: 450 VS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+S + L+++ L LS+ ++G+G LK+LDL G
Sbjct: 528 LSNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 571
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 204/481 (42%), Gaps = 52/481 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L EN +A L L LN+ C +VTS + L + L+ LDL R +V
Sbjct: 731 VRLSLENCKGFGDVAPLSNLVTLEELNLHYCDKVTS-GMGTLGRLPQLRVLDLGR-TQVD 788
Query: 130 DAGMKHLLSIST-LEKLWLSE----TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 184
D ++++ + S+ L L LS T ++A IA L++L+ L++ + + V +L
Sbjct: 789 DNSLENICTCSSPLVSLNLSNCKKITSISA--IASLTALEELNIDNCCNVTSGWNVFGTL 846
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSN 240
+L L ++ ++ + L+ LNLA+ T VT L I+ LE LNL
Sbjct: 847 H---QLRVATLSNTRTNDENVRHVSECKSLNTLNLAFCKDITDVTALSKITMLEELNLDC 903
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
C +I +G E L K + ++ +E ++ + + L
Sbjct: 904 C--HNIRKGIETLGTLPKARI-----LSMKECYM------------GDGYAQQCSILGNS 944
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K+L L+L S G SV+ ++ V A L L L + R LP L +L+L
Sbjct: 945 KSLVKLNLERSR-GRISVKALSNV-ATLEELVLDHARKVCCIPSFSC--LPRLRVLNLKY 1000
Query: 361 TQIDDYAISYMSMMPSLKFIDISN----TDIK-------GFIQQVGAETDLVLSLTALQN 409
T I+ +S SL+ +++S+ TDI V + +L
Sbjct: 1001 TDINGDVTKNISESKSLRSLNLSHCKWVTDISVLSSLLTLEELNVNCCNGIRKGWESLGK 1060
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSL-HQLSSLSKLTNLSIR 467
L L L T+++ + LS+ K+L+ L + L+DV++ +++ SL +L S
Sbjct: 1061 LPLLRVAILSDTKITAKDIACLSSCKKLVKLKFFQCEKLSDVTVVYKIQSLEELIVTSCS 1120
Query: 468 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIG 527
D + + LG+ R L ++ G + E + IEV EL+ I P I
Sbjct: 1121 DGLKGLNALGTLPRLRFHHLRNVRGSDISVESIGTSKSLVRLHIEVGEELTDITPLSNIT 1180
Query: 528 S 528
S
Sbjct: 1181 S 1181
>gi|291237888|ref|XP_002738864.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 871
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 160/364 (43%), Gaps = 76/364 (20%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
A + L+ LN++ CR++T K LD + +T K+L+++S L
Sbjct: 524 ALKRLKHLNLSSCRQLTD------------KVLDTVKADNITLLVFKYLVTLS------L 565
Query: 148 SETGLTADGIA--LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
ET +T G+ L SS LS L+L VTD L++L LT L+ L L G+++S+
Sbjct: 566 EETSVTDRGMQSYLQSSPSTLSHLNLNKTSVTDATLQALSALTHLKSLGLEGTKISH--L 623
Query: 206 AVLKMFPRLSFLNLAWTGVTKLP-------------NISSLECLNLSNCTIDSILEGNEN 252
LK +L LN+ T + + NIS+++C+N G+E
Sbjct: 624 DCLKALSKLQSLNICSTNLPAIALSHLKSLTSLSSLNISNIDCMN-----------GDEA 672
Query: 253 KAPLAKISLAGTTFINERE----AFLYIETSLLSFLDVSNS---SLSRFCFLTQMKALEH 305
L+ + L + YI L LD+++ + L+ M++L
Sbjct: 673 LQCLSGLKLTHLKMPSRHTTTDVGLKYISDMPLVVLDLTDYIRITDEGVRHLSNMRSLNS 732
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI-- 363
L L ++ I DD++ + + +NL L L +T S+ G +L G L++L L+ T++
Sbjct: 733 LFLVNTKITDDAMTHIQGL-SNLVELCLDHTEISNKGATVL-GFFNKLQVLGLASTRVTS 790
Query: 364 ---DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+ ++ + M+ L D D L AL+ L HL +NL++
Sbjct: 791 KLLKSHVLNKLVMLNKLNLRDTKIRDN---------------GLDALK-LPHLTLINLDR 834
Query: 421 TQVS 424
TQVS
Sbjct: 835 TQVS 838
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 21/183 (11%)
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI-LAGHLPNLEILSLSG-TQIDDYAIS 369
M GD++++ ++ G L +L + +R ++ VG+ +P L +L L+ +I D +
Sbjct: 667 MNGDEALQCLS--GLKLTHLKMP-SRHTTTDVGLKYISDMP-LVVLDLTDYIRITDEGVR 722
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
++S M SL + + NT I TD ++T +Q L++L L L+ T++S+
Sbjct: 723 HLSNMRSLNSLFLVNTKI----------TDD--AMTHIQGLSNLVELCLDHTEISNKGAT 770
Query: 430 PLSTFKELIHLSLRNASLTDVSL--HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 487
L F +L L L + +T L H L+ L L L++RD + ++GL + K P L L
Sbjct: 771 VLGFFNKLQVLGLASTRVTSKLLKSHVLNKLVMLNKLNLRDTKIRDNGLDALKLPH-LTL 829
Query: 488 LDL 490
++L
Sbjct: 830 INL 832
>gi|146095030|ref|XP_001467457.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134071822|emb|CAM70515.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 811
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 184/409 (44%), Gaps = 71/409 (17%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L + + LR L++ +C+ A + L+ + LS C V DA + HL + +
Sbjct: 276 LSDLASLQKLRRLDMTNCKGDFDCA--GIARCCFLRSVHLSGC-NVKDADVPHLAQLPCV 332
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
E+L LS T +T + L++ + L ++ L V + LQ L L LDL + VS+
Sbjct: 333 EELLLSRTRIT--NVQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSD 390
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA 262
L L +LNLA T VT +E A L+++
Sbjct: 391 --VNFLGQSQSLIYLNLAKTHVT------------------------SEGIAGLSRL--- 421
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 322
L +E L ++N+++ FL + +L+ L L S+++ +E
Sbjct: 422 -----------LTLE-----HLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLEGFG 465
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
+ L++L+L++TR +S H NL L L G+ +D I+ + +P L+ + +
Sbjct: 466 RL-QTLQDLSLAHTRVTSV---TELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRILLL 521
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD-ATLFPLSTFKELIHLS 441
S TD+ A +L+L +L E+L ++ + V++ + F ++ L ++
Sbjct: 522 SKTDV--------ASLELILKSESL------EQLEVKFSHVNEKSAFFGVTKASALTDVT 567
Query: 442 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L + ++D+ + L +L L++ + +T+ G+ RSL+ +DL
Sbjct: 568 LTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEGIAGLCEARSLQEVDL 614
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 175/411 (42%), Gaps = 57/411 (13%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR--CVKVTDAGMKHLLSISTL 142
+LG + L LN+A VTS + L+ + L+ L L+ V+ H L +L
Sbjct: 393 FLGQSQSLIYLNLAK-THVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSL 451
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+ + GL +G L +LQ+LS+ VT+L Q L LDL GS V
Sbjct: 452 QSTLVDSAGL--EGFGRLQTLQDLSLAHTRVTSVTEL-----QHCHNLWRLDLQGSFVDQ 504
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNL--SNCTIDSILEGNENKAPLA 257
G A L+ P+L L L+ T V L I SLE L + S+ S G + L
Sbjct: 505 AGIAGLERLPKLRILLLSKTDVASLELILKSESLEQLEVKFSHVNEKSAFFGVTKASALT 564
Query: 258 KISLAGTTFINEREAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
++L + + E LL+ V++ ++ C + ++L+ +DL+ + + D
Sbjct: 565 DVTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLC---EARSLQEVDLAETAVTD 621
Query: 316 -----------------DSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
SV + +GA LR L+++ T SS + L+ +LEIL
Sbjct: 622 ISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIAETPVSS--IRSLSA-CQSLEIL 678
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+LS T +DD + + SL+ + +S T I Q L +HLE L
Sbjct: 679 NLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLGQ--------------LGQCSHLEEL 724
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
+ + V+ L L L+ L+L L + +L++ KL L+++
Sbjct: 725 HAQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTNCRKLLKLNVK 774
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 182/418 (43%), Gaps = 44/418 (10%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
+LRS++++ C V + + L + C++EL LSR ++T+ ++ L + L + LS
Sbjct: 307 FLRSVHLSGCN-VKDADVPHLAQLPCVEELLLSR-TRITN--VQALAAGKGLRIIQLSNA 362
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+ +DGI L +L L+ LDL V+D+ L L YL+L + V++ G A L
Sbjct: 363 QVDSDGIDGLQTLPYLTRLDLSSTLVSDVNF--LGQSQSLIYLNLAKTHVTSEGIAGLSR 420
Query: 211 FPRLSFL---NLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGT-- 264
L L N V+ L SL+ L+L + +DS LEG L +SLA T
Sbjct: 421 LLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLEGFGRLQTLQDLSLAHTRV 480
Query: 265 -------------------TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
+F+++ L L +S + ++ + + ++LE
Sbjct: 481 TSVTELQHCHNLWRLDLQGSFVDQAGIAGLERLPKLRILLLSKTDVASLELILKSESLEQ 540
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L++ S + + S + L ++ L++ S G L +L++ +++
Sbjct: 541 LEVKFSHVNEKSAFFGVTKASALTDVTLTHCDVSDINN---LGMCKELRLLNVWSSKVTS 597
Query: 366 YAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLN 417
I+ + SL+ +D++ T + IQ + V SL + L L RL+
Sbjct: 598 EGIAGLCEARSLQEVDLAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLD 657
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
+ +T VS ++ LS + L L+L N ++ D + + L +S+ +T G
Sbjct: 658 IAETPVS--SIRSLSACQSLEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLG 713
>gi|46445969|ref|YP_007334.1| hypothetical protein pc0335 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399610|emb|CAF23059.1| hypothetical protein pc0335 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 642
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 146/308 (47%), Gaps = 19/308 (6%)
Query: 56 FPSLLEVFKHNAEAIEL-RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
F +L F + EA+ + + DA+ + L + L+ L + C T + L LT +
Sbjct: 295 FEKILNHFSNEIEALNFSKNAHLTDAQLLT-LKNCKNLKVLQLQACHNFTDAGLAHLTPL 353
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG 173
L+ L+LS C +TDAG+ HL + L+ L LS LT G+A L+ L L+ L+L
Sbjct: 354 MALQHLNLSYCKNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHLTPLVALTHLNLSW 413
Query: 174 L-PVTDLVLRSLQVLTKLEYLDLW-GSQVSNRGAAVLKMFPRLSFL------NLAWTGVT 225
+TD L L L L +LDL +++NRG A L + L +L NL G+
Sbjct: 414 CNKLTDAGLAHLTPLVALTHLDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTDAGLA 473
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF-INEREAFLYIETSLLSFL 284
L ++ +L+ L L C + G + APL ++ ++ N +A L T L++
Sbjct: 474 HLSSLVALQHLKLC-CCVSLTDAGLAHLAPLVALTHLDLSWCFNITDAGLAHLTPLVTLQ 532
Query: 285 DVSNSSLSR-----FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-F 338
+ S R LT++ AL+HL L+ D+ NL++L+LS R
Sbjct: 533 HLGLSGCRRLTDVGLAHLTRLVALQHLGLNRCDNLTDAGLAHLTPLINLQHLDLSECRKL 592
Query: 339 SSAGVGIL 346
++AG+ L
Sbjct: 593 TNAGLAHL 600
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N DA +A+L L+ L ++ CRR+T L LT + L+ L L+RC +TDAG+ H
Sbjct: 516 NITDAG-LAHLTPLVTLQHLGLSGCRRLTDVGLAHLTRLVALQHLGLNRCDNLTDAGLAH 574
Query: 136 LLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL 171
L + L+ L LSE LT G+A L+ L L LDL
Sbjct: 575 LTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDL 611
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAG 132
R +N DA +A+L L+ L++++CR++T++ L LT + L+ LDL C K+T A
Sbjct: 563 RCDNLTDAG-LAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDLRCCNKLTGAR 621
Query: 133 MKHL 136
+ H
Sbjct: 622 LAHF 625
>gi|417301579|ref|ZP_12088730.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327542171|gb|EGF28664.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 442
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 151/324 (46%), Gaps = 44/324 (13%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ + + LT + LK L L+ +TD +K + +++ L+L TG+T +G+ LL+
Sbjct: 107 IDDAGMENLTSLPKLKYLTLADTA-ITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTG 165
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG------------------ 204
L L +DL + D + SL + L + L S+V++ G
Sbjct: 166 LSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKSKVTDEGLVKLAPLPLKSINFNYCT 225
Query: 205 ---AAVLKMF---PRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI--DSILEGNE 251
+KM P L +L ++ + +L +S L+ L + C + + I
Sbjct: 226 TINGPTMKMLGQTPTLEYLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAG 285
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEHLDL 308
NKA LA+ L ++ +++ + + ++++D+S L+ L ++ L +L L
Sbjct: 286 NKA-LARFELRDSS-VDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGKLTGLTYLGL 343
Query: 309 SSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
+ D E +A G NL LNL +T + + +L + L+ L+++GTQ+ D
Sbjct: 344 WETKTND---ETLAGFGDLVNLEELNLKSTAVTDESLPVLM-KMTKLKTLNVAGTQLGDD 399
Query: 367 AISYMSMMPSLKFIDISNTDIKGF 390
+ ++ +P+LK ++++NT I GF
Sbjct: 400 SFLELAKLPNLKSMNVANTSI-GF 422
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 56/352 (15%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DAGM++L S+ L+ L L++T +T + + L ++ L L VTD L L L
Sbjct: 107 IDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGL 166
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 247
+KL +DL + + + G L L + L + VT
Sbjct: 167 SKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKSKVTD--------------------- 205
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
EG APL S+ F Y T ++ ++ L Q LE+L
Sbjct: 206 EGLVKLAPLPLKSIN----------FNYCTT-------INGPTMK---MLGQTPTLEYLQ 245
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
S I D S+ + + + L+ L + + G+ +AG+ L L + +DD
Sbjct: 246 GDYSKINDASMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDDDG 303
Query: 368 ISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNHLE 414
+ +S +P++ ++DIS + I Q+G T L +L +L +LE
Sbjct: 304 LKVISQLPAVTYVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLE 363
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
LNL+ T V+D +L L +L L++ L D S +L+ L L ++++
Sbjct: 364 ELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 415
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + ++ + L + D V L ++ + + +D+S C + G+ L
Sbjct: 275 VTGEGIQHIAGNKALARFELRDSS-VDDDGLKVISQLPAVTYVDISECRLASPEGIAQLG 333
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L L ET + +A L NL L+L VTD L L +TKL+ L++ G
Sbjct: 334 KLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAG 393
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
+Q+ + SFL LA KLPN+ S+ N S
Sbjct: 394 TQLGDD-----------SFLELA-----KLPNLKSMNVANTS 419
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
+PN + +G IDD + ++ +P LK++ +++T I TD L
Sbjct: 94 IPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAI----------TDETLKTAG--K 141
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
L+ ++ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 142 LDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKS 201
Query: 470 VLTNSGLGSFKP 481
+T+ GL P
Sbjct: 202 KVTDEGLVKLAP 213
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 44/268 (16%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+S+N C + + L G T E K+ DA M L +S L++L +
Sbjct: 216 LKSINFNYCTTINGPTMKML-GQTPTLEYLQGDYSKINDASMAELKGLSKLKRLRIRGCD 274
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV-SNRGAAVLKM 210
+T +GI ++ + L+ +L V D L+ + L + Y+D+ ++ S G A L
Sbjct: 275 VTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQLPAVTYVDISECRLASPEGIAQLGK 334
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 270
L++L L W TK T D L G + L +++L T +E
Sbjct: 335 LTGLTYLGL-WE--TK---------------TNDETLAGFGDLVNLEELNLKSTAVTDE- 375
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
L +M L+ L+++ + +GDDS +A + NL++
Sbjct: 376 ----------------------SLPVLMKMTKLKTLNVAGTQLGDDSFLELAKL-PNLKS 412
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSL 358
+N++NT + LA + P+L+++
Sbjct: 413 MNVANTSIGFDVIDTLAENHPDLQVIEF 440
>gi|350425720|ref|XP_003494211.1| PREDICTED: hypothetical protein LOC100742728 [Bombus impatiens]
Length = 971
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 196/449 (43%), Gaps = 49/449 (10%)
Query: 88 AFRYLRSLNVA--DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
F +R+LN++ + R+ + +T M+ L DLS +TD + +++ L +L
Sbjct: 211 GFERVRALNLSCNNLARLNDVLVGRVTNMSELTRFDLSDN-SLTDVSVGAFRTLAGLVRL 269
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L ++ L L LDL + DL +L L L+ LDL G+Q+ GA
Sbjct: 270 SLRRNAISTVHEDAFQGLDRLEYLDLSDNRLADLPDSALTPLYSLQKLDLSGNQLQVLGA 329
Query: 206 AVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTID----SILEG------- 249
+ RL L+++ G+ + L + L L LS + S+L G
Sbjct: 330 RWFESLDRLRELDVSRNGLARAASGTLQPLPGLSILKLSENPLKERDVSLLLGTGRRLET 389
Query: 250 -NENKAPLAKIS-----------LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--C 295
+ ++ LA++ LAG R L LL LD+S + L
Sbjct: 390 VDASRTGLARVPAALTRSVRALRLAGNKLTTIRGGDLD-SYPLLRILDISENRLIDIEND 448
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
L +++ LE LD+S +++ V++ A + +L NL L R ++ + L G L NL+
Sbjct: 449 ALGRLEVLEELDISGNVL----VKIPASLPNSLTNLKLQRNRITTLKIDDLQG-LYNLKS 503
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L+L+ I+ + + +P L+ +D+S+ IK + + L + L LE+
Sbjct: 504 LTLNDNDINAIEVGALGQLPVLEELDLSDNPIKTLPANTLSGPSNLAKL-RMSGLTSLEQ 562
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
EQ+ ++ FP+ T + L+ L + R+ L L ++LS +L D TNS
Sbjct: 563 KQEEQSDMA----FPVPTPERLVFLDVSRSPVLARQLLADDAALSACKSLVQLDLSRTNS 618
Query: 475 GLGSFKPPR---SLKLLDLHGG-WLLTED 499
F P L++L+L W TED
Sbjct: 619 TSLRFDLPYMLPQLRILNLSANHWDCTED 647
>gi|431930507|ref|YP_007243553.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
gi|431828810|gb|AGA89923.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
Length = 1283
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 171/396 (43%), Gaps = 46/396 (11%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L L +L DC + L L G+T L+ LD C AG++ L ++TL
Sbjct: 130 VADLTPLAGLTNLQALDCGCTPVTDLTPLAGLTNLRSLD---CAYTPVAGLEPLADLTTL 186
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+ L T + AD +A L+ L L LD G V D L + L L+ LD G++V +
Sbjct: 187 KSLDCRHTRV-AD-LAPLAGLTELQFLDCGDTRVAD--LEPVASLANLQSLDCGGTRVVD 242
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI--- 259
L L L+ +T V L ++SL L +C + + PLA +
Sbjct: 243 --LTPLAGLANLQALDCGFTQVADLAPLASLTNLQSLDCRSAPV----TDLGPLASLGNL 296
Query: 260 -SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 318
SL A L T+LLS L+ N+ + L + L+ L+ SS+ + D
Sbjct: 297 QSLICQFTPVADLAPLAGLTNLLS-LNCWNTPVIDLAPLASIGNLQSLNCSSTPVAD--- 352
Query: 319 EMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 377
+ + G NLR+L + + + + LAG L NL L GT + D + P +
Sbjct: 353 -LASLAGLTNLRSLECAGSPVTD--LAPLAG-LTNLRSLDCEGTPVAD-------LGPLI 401
Query: 378 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 437
++ + D GF + V L L L +L+ L QT V+D L PL+ L
Sbjct: 402 NLTNLRSLDC-GFTR--------VTDLAPLAGLTNLQSLICRQTPVAD--LAPLAALNNL 450
Query: 438 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
+ N +TD L L+ L+ + +L + ++N
Sbjct: 451 QSFACGNTRITD--LTPLADLANMESLDCGETPISN 484
>gi|66807643|ref|XP_637544.1| hypothetical protein DDB_G0286583 [Dictyostelium discoideum AX4]
gi|60465980|gb|EAL64047.1| hypothetical protein DDB_G0286583 [Dictyostelium discoideum AX4]
Length = 722
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 155/325 (47%), Gaps = 34/325 (10%)
Query: 86 LGAFRYLRSL-NVA--DCRRVTSSALWALTGMTC---LKELDLSRCVKVTDAGMKHLLSI 139
L F+Y+ L NV +C + L LK LDL R ++TD G+++L +
Sbjct: 339 LNCFKYMAELSNVYFRNCENLNDIGLQIFRQPNFEKNLKTLDL-RDNRITDVGIRNLKGL 397
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
LE+L+L TG T G+ALL +L L LD+ +TD + + T+L++L L G+Q
Sbjct: 398 LNLEELYLGSTGCTDIGLALLCNLLKLKTLDVSKCNITDSSMDIICRFTELKFLYLSGTQ 457
Query: 200 VSNRGAAVLKMFPRL--------------SFLNLAWTGVTKLPNISSLECLNLSNCTI-- 243
V+++G + P L S LA+ G T L+ L++ I
Sbjct: 458 VTDKGINTISKLPNLIQLYVSNCLRITNQSLFFLAYLGKT-------LKLLDIFQTKIGL 510
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKA 302
+ ++ K L + L G IN+ S L LD+S+ ++S LT +++
Sbjct: 511 NGFIQLRMFKQ-LQFLVLPGRDSINDATIGHLNSLSNLRKLDLSDYRNISDLSPLTNLQS 569
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
L L LS++ I D+S+ +L L+L+ T ++ GV L L LSLS T+
Sbjct: 570 LTELLLSNTKISDNSIINSIKTMDSLEVLSLNKTEVTTEGVSQLVNLN--LTSLSLSSTK 627
Query: 363 IDDYAISYMSMMPSLKFIDISNTDI 387
ID ++ Y+ M SL+ +DIS DI
Sbjct: 628 IDGKSLYYLGQMKSLQKLDISFNDI 652
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 150/340 (44%), Gaps = 64/340 (18%)
Query: 59 LLEVFKHNAEAIELRGENSVDAEWMAYLGAFR---YLRSLNVADCR--RVTSSALWALTG 113
LL FK+ AE + N + + L FR + ++L D R R+T + L G
Sbjct: 338 LLNCFKYMAELSNVYFRNCENLNDIG-LQIFRQPNFEKNLKTLDLRDNRITDVGIRNLKG 396
Query: 114 MTCLKEL------------------------DLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L+EL D+S+C +TD+ M + + L+ L+LS
Sbjct: 397 LLNLEELYLGSTGCTDIGLALLCNLLKLKTLDVSKC-NITDSSMDIICRFTELKFLYLSG 455
Query: 150 TGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQVLTK-LEYLDLWGSQVSNRGAAV 207
T +T GI +S L NL L + L +T+ L L L K L+ LD++ +++ G
Sbjct: 456 TQVTDKGINTISKLPNLIQLYVSNCLRITNQSLFFLAYLGKTLKLLDIFQTKIGLNGFIQ 515
Query: 208 LKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL 261
L+MF +L FL L + L ++S+L L+LS+ S L N L ++ L
Sbjct: 516 LRMFKQLQFLVLPGRDSINDATIGHLNSLSNLRKLDLSDYRNISDLSPLTNLQSLTELLL 575
Query: 262 AGT-----TFINEREAFLYIETSLLSFLDVSNSSLSRFC--------------------F 296
+ T + IN + +E L+ +V+ +S+ +
Sbjct: 576 SNTKISDNSIINSIKTMDSLEVLSLNKTEVTTEGVSQLVNLNLTSLSLSSTKIDGKSLYY 635
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
L QMK+L+ LD+S + I D+S++ + + L +++L T
Sbjct: 636 LGQMKSLQKLDISFNDITDNSMDYLKPIADTLSHIDLRGT 675
>gi|207743293|ref|YP_002259685.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
gi|206594690|emb|CAQ61617.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
Length = 625
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 175/420 (41%), Gaps = 51/420 (12%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
D A+LG + L+S+ +T AL AL E+ S V++AG+ LL+
Sbjct: 129 DPAMFAHLGKYPALKSVRFKG--ELTLEALKALPPGVEHLEIGRSTGSGVSNAGLA-LLA 185
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L+ L L+ + A+G LL++ +L+ L L G + D +L + LDL +
Sbjct: 186 TRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQSRSIASLDLSVN 245
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGNEN 252
+ GA L P +S LNL G+ L +L+ LN SN I D+ + G +
Sbjct: 246 MIGPDGARALAGAPLVS-LNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFAD 304
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSS 310
L +++LAG I A + L+ LD+S + L L ++L L++ +
Sbjct: 305 NTVLTQLNLAG-NMIGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRN 363
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSA------------------------GVGIL 346
+ IGDD E +A L++LNLS R G L
Sbjct: 364 NEIGDDGTEALA-RNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASAL 422
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
A + ++ L L +I D ++ + +L +D+S +I QV A D ++S
Sbjct: 423 ARNT-SVASLHLGSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMS--- 478
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
LNL+ ++ D L+ L L+L + + L+ + LT L +
Sbjct: 479 ---------LNLDDNEIGDDGTAALAQHPRLTSLNLASNRIGPTGAQHLAKSATLTELDL 529
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 163/415 (39%), Gaps = 45/415 (10%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS---------RCVK- 127
+DAE L L SL++ C + A AL + LDLS R +
Sbjct: 199 IDAEGARLLATCASLTSLSLTGCS-IGDRAATALAQSRSIASLDLSVNMIGPDGARALAG 257
Query: 128 ------------VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ D G L + TL+ L S G+ G+ + L+ L+L G
Sbjct: 258 APLVSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNM 317
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNI 230
+ R+L+ T L LDL +++ + GA VL L+ LN + G L
Sbjct: 318 IGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRNNEIGDDGTEALARN 377
Query: 231 SSLECLNLS-NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
++L+ LNLS N L+++ L + L TS+ S SN
Sbjct: 378 TTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVASLHLGSNR 437
Query: 290 -SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
S + ++ L LDLS + I D +++A +L +LNL + G LA
Sbjct: 438 IGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAG-NDSLMSLNLDDNEIGDDGTAALAQ 496
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
H P L L+L+ +I +++ +L +D+S ++G E LSL+ +
Sbjct: 497 H-PRLTSLNLASNRIGPTGAQHLAKSATLTELDLSE-------NRIGPEGAEALSLSTV- 547
Query: 409 NLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
L LN+ + +A + L L RN + + L + ++LT
Sbjct: 548 ----LTTLNVSGNAIGEAGARAFAEKSTSLTSLDARNNRMGEAGAKMLEANTRLT 598
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 14/226 (6%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
N + + L L+SLN++ R+ AL G T L ELDL C + G
Sbjct: 363 NNEIGDDGTEALARNTTLKSLNLS-YNRIGLQGAGALGGNTTLSELDLRACA-IDPYGAS 420
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L +++ L L + G +++++ L++LDL + D + L L L+
Sbjct: 421 ALARNTSVASLHLGSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMSLN 480
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCTIDSILEG 249
L +++ + G A L PRL+ LNLA TG L ++L L+LS I EG
Sbjct: 481 LDDNEIGDDGTAALAQHPRLTSLNLASNRIGPTGAQHLAKSATLTELDLSENRIGP--EG 538
Query: 250 NEN---KAPLAKISLAGTTFINEREAFLYIETSL-LSFLDVSNSSL 291
E L ++++G I E A + E S L+ LD N+ +
Sbjct: 539 AEALSLSTVLTTLNVSGNA-IGEAGARAFAEKSTSLTSLDARNNRM 583
>gi|290996041|ref|XP_002680591.1| predicted protein [Naegleria gruberi]
gi|284094212|gb|EFC47847.1| predicted protein [Naegleria gruberi]
Length = 281
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 121/258 (46%), Gaps = 19/258 (7%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+ HL + L+KL + ++ + +G+ +S L+ L+ LD+ +++ + L L +L +
Sbjct: 17 LNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYLSELKQLTF 76
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSIL 247
L + + + +G+ + +L+ L N+ G L + L LN+ + I
Sbjct: 77 LIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDNRI---- 132
Query: 248 EGNENKAPLAKISLAGTTFINE----REAFLYI-ETSLLSFLDVSNSSLSRFC--FLTQM 300
G+E + ++ +IN E Y+ E L L++SN+ + +L ++
Sbjct: 133 -GDEGSKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCEL 191
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K L LD+S + IGD+ ++ ++ + L +L++S + GV ++ L + L ++
Sbjct: 192 KQLMDLDISCNDIGDEGIKYLSGL-KQLTHLDISYNKIRDEGVKYIS-ELKEIMYLYINN 249
Query: 361 TQIDDYAISYMSMMPSLK 378
I D Y+S M LK
Sbjct: 250 NYIGDEGTKYLSEMNQLK 267
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--------- 347
L+++K L+ L + S IGD+ V ++ + L L++ N S G L+
Sbjct: 20 LSELKQLKKLHIYDSYIGDEGVRFISEL-KQLTTLDIRNNGISEYGAKYLSELKQLTFLI 78
Query: 348 --------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 389
L L IL + IDD Y+S + L +++I + I
Sbjct: 79 IDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDNRIGDEGSK 138
Query: 390 FIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLS 441
+I ++ TDL ++ + N L HL LN+ Q+ D L K+L+ L
Sbjct: 139 YIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCELKQLMDLD 198
Query: 442 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
+ + D + LS L +LT+L I + + G+ + + L ++ ++ E
Sbjct: 199 ISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYINNNYIGDE 255
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 119/307 (38%), Gaps = 55/307 (17%)
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
L L L +L+ L ++ S + + G + +L+ L++ G+++ E L+
Sbjct: 16 ALNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYLSELKQLT 75
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 299
ID I G+ +I+E + + +D +N +L++
Sbjct: 76 FLIIDK-----------NNIGAKGSKYISELKQLTIL------IIDKNNIDDEGAKYLSE 118
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
+K L +L++ + IGD+ + + + L +L ++N + + G L+ L +L +L++S
Sbjct: 119 LKQLTYLNIQDNRIGDEGSKYIGEL-KQLTDLYINNNQIGNEGAKYLS-ELKHLILLNIS 176
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
QI D Y+ + L +DIS DI
Sbjct: 177 NNQIGDEGAKYLCELKQLMDLDISCNDI-------------------------------- 204
Query: 420 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
D + LS K+L HL + + D + +S L ++ L I + + + G
Sbjct: 205 ----GDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYINNNYIGDEGTKYL 260
Query: 480 KPPRSLK 486
LK
Sbjct: 261 SEMNQLK 267
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N++D E YL + L LN+ D R+ + + L +L ++ ++ + G K
Sbjct: 105 KNNIDDEGAKYLSELKQLTYLNIQD-NRIGDEGSKYIGELKQLTDLYINNN-QIGNEGAK 162
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+L + L L +S + +G L L+ L LD+ + D ++ L L +L +LD
Sbjct: 163 YLSELKHLILLNISNNQIGDEGAKYLCELKQLMDLDISCNDIGDEGIKYLSGLKQLTHLD 222
Query: 195 LWGSQVSNRGAAVLKMFPRLSFL 217
+ +++ + G + + +L
Sbjct: 223 ISYNKIRDEGVKYISELKEIMYL 245
>gi|83748568|ref|ZP_00945588.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
gi|83724776|gb|EAP71934.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
Length = 629
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 175/420 (41%), Gaps = 51/420 (12%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
D A+LG + L+S+ +T AL AL E+ S V++AG+ LL+
Sbjct: 133 DPAMFAHLGKYPALKSVRFKG--ELTLEALKALPPGVEHLEIGRSTGSGVSNAGLA-LLA 189
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L+ L L+ + A+G LL++ +L+ L L G + D +L + LDL +
Sbjct: 190 TRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGDRAATALAQSRSIASLDLSVN 249
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGNEN 252
+ GA L P +S LNL G+ L +L+ LN SN I D+ + G +
Sbjct: 250 MIGPDGARALAGAPLVS-LNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFAD 308
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSS 310
L +++LAG I A + L+ LD+S + L L ++L L++ +
Sbjct: 309 NTVLTQLNLAG-NMIGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRN 367
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSA------------------------GVGIL 346
+ IGDD E +A L++LNLS R G L
Sbjct: 368 NEIGDDGTEALA-RNTTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASAL 426
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
A + ++ L L +I D ++ + +L +D+S +I QV A D ++S
Sbjct: 427 ARNT-SVASLHLGSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMS--- 482
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
LNL+ ++ D L+ L L+L + + L+ + LT L +
Sbjct: 483 ---------LNLDDNEIGDDGTAALAQHPRLTSLNLASNRIGPTGAQHLAKSATLTELDL 533
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 163/415 (39%), Gaps = 45/415 (10%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS---------RCVK- 127
+DAE L L SL++ C + A AL + LDLS R +
Sbjct: 203 IDAEGARLLATCASLTSLSLTGCS-IGDRAATALAQSRSIASLDLSVNMIGPDGARALAG 261
Query: 128 ------------VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
+ D G L + TL+ L S G+ G+ + L+ L+L G
Sbjct: 262 APLVSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNM 321
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNI 230
+ R+L+ T L LDL +++ + GA VL L+ LN + G L
Sbjct: 322 IGPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRNNEIGDDGTEALARN 381
Query: 231 SSLECLNLS-NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
++L+ LNLS N L+++ L + L TS+ S SN
Sbjct: 382 TTLKSLNLSYNRIGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVASLHLGSNR 441
Query: 290 -SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
S + ++ L LDLS + I D +++A +L +LNL + G LA
Sbjct: 442 IGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAG-NDSLMSLNLDDNEIGDDGTAALAQ 500
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
H P L L+L+ +I +++ +L +D+S ++G E LSL+ +
Sbjct: 501 H-PRLTSLNLASNRIGPTGAQHLAKSATLTELDLSE-------NRIGPEGAEALSLSTV- 551
Query: 409 NLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
L LN+ + +A + L L RN + + L + ++LT
Sbjct: 552 ----LTTLNVSGNAIGEAGARAFAEKSTSLTSLDARNNRMGEAGAKMLEANTRLT 602
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 14/225 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + L L+SLN++ R+ AL G T L ELDL C + G
Sbjct: 368 NEIGDDGTEALARNTTLKSLNLS-YNRIGLQGAGALGGNTTLSELDLRACA-IDPYGASA 425
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L +++ L L + G +++++ L++LDL + D + L L L+L
Sbjct: 426 LARNTSVASLHLGSNRIGDSGARAIATIRTLTLLDLSRNNIHDAGAQVLAGNDSLMSLNL 485
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCTIDSILEGN 250
+++ + G A L PRL+ LNLA TG L ++L L+LS I EG
Sbjct: 486 DDNEIGDDGTAALAQHPRLTSLNLASNRIGPTGAQHLAKSATLTELDLSENRIGP--EGA 543
Query: 251 EN---KAPLAKISLAGTTFINEREAFLYIETSL-LSFLDVSNSSL 291
E L ++++G I E A + E S L+ LD N+ +
Sbjct: 544 EALSLSTVLTTLNVSGNA-IGEAGARAFAEKSTSLTSLDARNNRM 587
>gi|283779449|ref|YP_003370204.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
gi|283437902|gb|ADB16344.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
Length = 633
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G +V + +A LG F+ L+ L+++ +VT + L L +T L +L L ++ A +
Sbjct: 481 GRTTVTDQGLAQLGQFKRLKWLDLS-LTKVTDTGLEQLDQLTQLNQLFL-EGTAISSASI 538
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ + LE+L LS+ + D +A +++L+ L VL L G PVTD L L L LE L
Sbjct: 539 PAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEML 598
Query: 194 DLWGSQVSNRGAAVLK 209
DL G++VS A LK
Sbjct: 599 DLRGTRVSADAAEKLK 614
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT L L LK LDLS KVTD G++ L ++ L +L+L T +++ I ++
Sbjct: 485 VTDQGLAQLGQFKRLKWLDLS-LTKVTDTGLEQLDQLTQLNQLFLEGTAISSASIPAIAR 543
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+NL LDL + + D L + L +L+ L L G+ V++ G A L L L+L T
Sbjct: 544 LRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEMLDLRGT 603
Query: 223 GVT 225
V+
Sbjct: 604 RVS 606
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 18/140 (12%)
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
LSL T + D ++ + LK++D+S T + TD T L+ L+ L +
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKV----------TD-----TGLEQLDQLTQ 522
Query: 416 LN---LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
LN LE T +S A++ ++ + L L L ++ D L ++++L +L L + +T
Sbjct: 523 LNQLFLEGTAISSASIPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVT 582
Query: 473 NSGLGSFKPPRSLKLLDLHG 492
++GL ++L++LDL G
Sbjct: 583 DAGLAKLVSLQNLEMLDLRG 602
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 43/171 (25%)
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNEN 252
L L + V+++G A L F RL +L+L+ T VT D+ LE +
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVT------------------DTGLEQLDQ 519
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
L ++ L GT +S++S+ + +++ LE LDLS
Sbjct: 520 LTQLNQLFLEGTA--------------------ISSASIPA---IARLRNLEELDLSKVN 556
Query: 313 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
I DD + +A + L+ L L T + AG+ L L NLE+L L GT++
Sbjct: 557 IADDDLAKIATL-KQLKVLYLVGTPVTDAGLAKLVS-LQNLEMLDLRGTRV 605
>gi|72385469|ref|XP_846402.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|9366571|emb|CAB95333.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 207/461 (44%), Gaps = 75/461 (16%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L S N+ D S + ++ L +L +S C VTDA + ++ LE+L LS
Sbjct: 286 LNSTNIDD------SCVEEISACVKLSKLSVSECNNVTDA--TPISQLAALEELNLSNCH 337
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLR------SLQVL-----------------T 188
+T GI L L L +LDL G+PV D L+ SL+ L T
Sbjct: 338 ITK-GIGTLGMLLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNAT 396
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC------LNLSNCT 242
+E L+L G + RG V+ PRL L++ +++ P++ S+ ++L NC
Sbjct: 397 AIEELNLNGCRRITRGIGVVWALPRLRILHMKDVHLSE-PSLDSVGTGGLLVKVSLDNCA 455
Query: 243 -------IDSILEGNE-NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 294
+ SI+ E N A I ++G + Y+ +L+ +V SSL F
Sbjct: 456 GFGDMTLLSSIVTLEELNIQKCADI-ISGVGCLG---TLPYLR--VLNVKEVHISSLD-F 508
Query: 295 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
+ K+L L L S G +VE +A + L L+L AG+G L G+LP L+
Sbjct: 509 IGIGASKSLLQLTL-ESFTGLSNVEALANI-LTLEKLSLHGCTGIDAGIGCL-GNLPQLK 565
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS------- 403
+L LSGT D+ ++ + + ++ +++S+ T++ I + A +L LS
Sbjct: 566 MLDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKMTNV-SHISSLEALNELNLSNCIRINA 624
Query: 404 -LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKL 461
A++ L L L T ++D + S K L+ L L + L DV+ LS+++ L
Sbjct: 625 GWEAIEKLQQLHVAILSNTHITDRDISHFSKCKNLVTLDLSFCNKLLDVT--TLSNITTL 682
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
L++ GL L +L++ G L ED+++
Sbjct: 683 EELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQL--EDSVI 721
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 166/399 (41%), Gaps = 66/399 (16%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
+ +L + LK L L R + + +HL S+ TLE+L +++T + I +S L NL
Sbjct: 225 MISLNNLDMLKRLRL-RSNNIDNNDARHLFSVGTLEELAITDT-MQLTNIREISRLTNLK 282
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
L+L + D + + KL L + S+ +N T T +
Sbjct: 283 CLELNSTNIDDSCVEEISACVKLSKLSV--SECNN------------------VTDATPI 322
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+++LE LNLSNC I T I L + LS + V
Sbjct: 323 SQLAALEELNLSNCHI--------------------TKGIGTLGMLLRLRILDLSGVPVE 362
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
++ L C +LE L++S + D + + LNL+ R + G+G++
Sbjct: 363 DNCLKDLC---DCGSLERLNISYCIQLTDINPLSNATA--IEELNLNGCRRITRGIGVVW 417
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-----------IQQVGA 396
LP L IL + + + ++ S+ + +S + GF ++++
Sbjct: 418 A-LPRLRILHMKDVHLSEPSLD--SVGTGGLLVKVSLDNCAGFGDMTLLSSIVTLEELNI 474
Query: 397 E--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LH 453
+ D++ + L L +L LN+++ +S + K L+ L+L S T +S +
Sbjct: 475 QKCADIISGVGCLGTLPYLRVLNVKEVHISSLDFIGIGASKSLLQLTLE--SFTGLSNVE 532
Query: 454 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L+++ L LS+ ++G+G LK+LDL G
Sbjct: 533 ALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 571
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 199/459 (43%), Gaps = 69/459 (15%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA----GMKHLLSISTLEKLWL 147
L SLN++ C+++TS + A+ +T L+EL++ C VT G H L ++TL
Sbjct: 802 LVSLNLSHCKKITS--ISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATL----- 854
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
S T + + I +S ++L+ L+L +TD+ +L +T LE L+L +G
Sbjct: 855 SNTRINDENIQHVSECKSLNTLNLAFCKDITDVT--ALSTITMLEELNLDCCHNIRKGIE 912
Query: 207 VLKMFPRLSFLNL--AWTG------VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
L P++ L++ + G + L N SL LNL ++ N A L +
Sbjct: 913 TLGKLPKVRILSMKECYMGDSDAQQCSILGNSKSLVKLNLERSMGFISVKALSNIATLEE 972
Query: 259 ISLAGTTFINEREAFL---YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
+ L I + +F + L + D+++ +++ K+L+ L+LS
Sbjct: 973 LVLDSVCGIYDVLSFSCLPRLRVLNLKYTDINDDVTKN---ISESKSLQSLNLSHCKWVT 1029
Query: 316 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI---DDYAISYMS 372
D + +++ + + L LN++ G L G LP L + LS T I D +S
Sbjct: 1030 D-ISVLSSL-STLEELNVNFCNGIRKGWESL-GKLPLLRVAILSDTNITAKDIACLSSCK 1086
Query: 373 MMPSLKFI---DISNTDIKGFIQQ-----VGAETDLVLSLTALQNLNHLE---------- 414
+ L+F +S+ + IQ V +D + L AL L+ L
Sbjct: 1087 KLVKLQFFRCEKLSDVTVVYEIQSLEELIVRKYSDGLKGLNALGTLSRLRFLHLRNARGS 1146
Query: 415 --------------RLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
RLN+E + +++DAT PLS L LSLR+ T L L
Sbjct: 1147 DISVESIGTSKSLVRLNIETREELTDAT--PLSNITSLEELSLRDCGDTLEGAWTLGKLP 1204
Query: 460 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
+L +L + + ++++ L R + L+L + LT+
Sbjct: 1205 RLRSLDLGLSDISDNTLDEICLSRFITSLNLRYNFKLTD 1243
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 62/144 (43%), Gaps = 31/144 (21%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD-------- 178
++TDA L +I++LE+L L + G T +G L L L LDLG ++D
Sbjct: 1169 ELTDA--TPLSNITSLEELSLRDCGDTLEGAWTLGKLPRLRSLDLGLSDISDNTLDEICL 1226
Query: 179 ------LVLR---------SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
L LR S+ LT LE L+L G G L PRL LNL T
Sbjct: 1227 SRFITSLNLRYNFKLTDISSISNLTALEELNLSGCHRITSGWEALSELPRLRVLNLESTS 1286
Query: 224 VTK------LPNISSLECLNLSNC 241
VT + SL LNL +C
Sbjct: 1287 VTTRDGGYYISRCKSLVTLNLESC 1310
>gi|84043372|ref|XP_951476.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348176|gb|AAQ15503.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359981|gb|AAX80405.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1393
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 186/423 (43%), Gaps = 39/423 (9%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L LN++ C ++T + L+ T ++EL+L+ C ++T G+ + ++ L + +
Sbjct: 321 LERLNISYCIQLTD--INPLSNATAIEELNLNGCRRIT-RGIDVVWALPKLRVFHMKDVH 377
Query: 152 LTA---DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
L+ D + SL +S+ + G D+ L L + LE L++ G L
Sbjct: 378 LSEPSLDSVGTGGSLVKVSLDNCAGFG--DMSL--LSSIVTLEELNIQKCADIISGVGCL 433
Query: 209 KMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 263
P L LN+ + T + SL LN+ + T S +E N L K+SL G
Sbjct: 434 GTLPYLRVLNIKEVHISSLDFTGIGASKSLLQLNMESITGLSNVEALANILTLEKLSLHG 493
Query: 264 TTFINEREAFL----YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
T I+ L ++ LS + N SL C M +L +L M +V
Sbjct: 494 CTDIDAGIGCLGNLPQLKVLDLSGTNTDNESLRSLCLSQTMVSL-NLSHCWKMT---NVS 549
Query: 320 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-- 377
++ + A L LNLSN +AG L L L + LS T I D ISY S +L
Sbjct: 550 HISSLEA-LNELNLSNCIRINAGWEALE-KLQQLHVAILSNTHITDRGISYFSKCKNLVT 607
Query: 378 -------KFIDISNTDIKGFIQQVGAET--DLVLSLTALQNLNHLERLNLEQTQVSDATL 428
K +D++ ++++ ++ ++ L+ L L L LN++ Q+ D+ +
Sbjct: 608 LDLSFCNKLLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVI 667
Query: 429 FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 487
L K L+ LSL N DV+ LS+L L L++ SG+G+ L++
Sbjct: 668 GSLGNGKSLVRLSLENCKGFGDVT--PLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRV 725
Query: 488 LDL 490
LDL
Sbjct: 726 LDL 728
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 180/443 (40%), Gaps = 83/443 (18%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL------ 136
M+ L + L LN+ C + S G+ CL L R + + + + L
Sbjct: 406 MSLLSSIVTLEELNIQKCADIIS-------GVGCLGTLPYLRVLNIKEVHISSLDFTGIG 458
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
S S L+ S TGL+ + L+++ L L L G D + L L +L+ LDL
Sbjct: 459 ASKSLLQLNMESITGLS--NVEALANILTLEKLSLHGCTDIDAGIGCLGNLPQLKVLDLS 516
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLA--WTGVTKLPNISSLECLN---LSNCT-IDSILEGN 250
G+ N L + + LNL+ W +T + +ISSLE LN LSNC I++ E
Sbjct: 517 GTNTDNESLRSLCLSQTMVSLNLSHCWK-MTNVSHISSLEALNELNLSNCIRINAGWEAL 575
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS-NSSLSRFCFLTQMKALEHLDLS 309
E L +++ T I +R + + L LD+S + L L+ + LE L+L
Sbjct: 576 EKLQQL-HVAILSNTHITDRGISYFSKCKNLVTLDLSFCNKLLDVTTLSNITTLEELNLD 634
Query: 310 S--------SMIGD---------------DSV-------------EMVACVG-------- 325
S S++G+ DSV + C G
Sbjct: 635 SCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIGSLGNGKSLVRLSLENCKGFGDVTPLS 694
Query: 326 --ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
L LNL ++G+G L G LP L +L L TQ+DD ++ + S+ + ++
Sbjct: 695 NLVTLEELNLHYCDKVTSGMGTL-GRLPQLRVLDLGRTQVDDNSLENIC-TSSIPLVSLN 752
Query: 384 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
+ K + S++A+ +L LE LN++ + T +L +L
Sbjct: 753 FSHCKK-----------ITSISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATLS 801
Query: 444 NASLTDVSLHQLSSLSKLTNLSI 466
N + D + +S L L++
Sbjct: 802 NTRINDEKIRHVSECKSLNTLNL 824
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 193/455 (42%), Gaps = 60/455 (13%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
++ + + + LRSLN++ C+ VT + L+ ++ L+EL+++ C G + L
Sbjct: 949 INGDATKNISESKSLRSLNLSHCKWVTD--ISVLSSLSTLEELNVN-CCNAIRKGWESLG 1005
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDL-VLRSLQVLTKLEYLDL 195
+ L LS+T +TA IA LSS + L L ++D+ V+ +Q L +L +
Sbjct: 1006 KLPLLRVAILSDTNITAKDIACLSSCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIVKNC 1065
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNL----------------------------AWTGVTKL 227
G +G L PRL FL+L T T L
Sbjct: 1066 SGGL---KGLNALGTLPRLRFLHLRNVSGSDISVESIGTSKSLVRLNIETREELTDTTPL 1122
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
NI+SLE L+L C + G K P + G + IN+ + + ++ L+++
Sbjct: 1123 SNITSLEELSLRKCGNNLEGVGTLGKLPRLRSLYLGLSRINDSTLYYICLSRSITSLNLA 1182
Query: 288 NS-SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
+S L+ ++++ ALE L+L E ++ + LR LNL +TR ++ G
Sbjct: 1183 SSWKLTDISHISKLTALEELNLRGCYPITSGWEALSEL-PRLRVLNLESTRVTTRYGGYY 1241
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
+L LSL + D S ++ + +L+ + +G +L +
Sbjct: 1242 IRRCKSLVTLSLESCDMTDA--SCLANIKTLEEL------------HIGRCKELRWGFSP 1287
Query: 407 LQNLNHLERLNLEQTQVSDATLF---PLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 462
L L L LNL + ++D L P T +EL +LS L D++ L ++ S+ KL
Sbjct: 1288 LFTLPRLRILNLICSLITDEDLREIQPPHTIEEL-NLSY-CEELNDITPLGRIKSIKKLH 1345
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG--GWL 495
DA G S L +DL+ GW
Sbjct: 1346 LRQSHDARRPTEGFRSLLELPCLSWVDLNNVYGWF 1380
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 217/498 (43%), Gaps = 88/498 (17%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTS-SALWALTGMTCLK---------------- 118
N+VD + +L + L L + D ++T+ + LT + CL+
Sbjct: 187 NNVDNNDVCHLFSVGTLEELAITDTMQLTNIRGISRLTNLMCLELNSTDIDDTCIGEISA 246
Query: 119 -----ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
+L +S C +TDA + ++ LE+L L+ GI L L L +LDL G
Sbjct: 247 CAKLSKLSVSECNNITDA--TPISQLAALEELNLNSCYHITKGIGTLGMLLRLRMLDLSG 304
Query: 174 LPVTDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKM 210
+PV D L+ SL+ L T +E L+L G + RG V+
Sbjct: 305 VPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGIDVVWA 364
Query: 211 FPRLSF-----LNLAWTGVTKLPNISSLECLNLSNCT-------IDSILEGNE-NKAPLA 257
P+L ++L+ + + SL ++L NC + SI+ E N A
Sbjct: 365 LPKLRVFHMKDVHLSEPSLDSVGTGGSLVKVSLDNCAGFGDMSLLSSIVTLEELNIQKCA 424
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
I ++G + Y+ +L+ +V SSL F + K+L L++ S+ G +
Sbjct: 425 DI-ISGVGCLG---TLPYLR--VLNIKEVHISSLD-FTGIGASKSLLQLNM-ESITGLSN 476
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 377
VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++ + + ++
Sbjct: 477 VEALANI-LTLEKLSLHGCTDIDAGIGCL-GNLPQLKVLDLSGTNTDNESLRSLCLSQTM 534
Query: 378 KFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSD 425
+++S+ T++ I + A +L LS AL+ L L L T ++D
Sbjct: 535 VSLNLSHCWKMTNV-SHISSLEALNELNLSNCIRINAGWEALEKLQQLHVAILSNTHITD 593
Query: 426 ATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
+ S K L+ L L + L DV+ LS+++ L L++ GL
Sbjct: 594 RGISYFSKCKNLVTLDLSFCNKLLDVT--TLSNITTLEELNLDSCSNIRKGLSVLGELPR 651
Query: 485 LKLLDLHGGWLLTEDAIL 502
L +L++ G L ED+++
Sbjct: 652 LCVLNIKGVQL--EDSVI 667
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 163/400 (40%), Gaps = 71/400 (17%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L + LK L L R V + + HL S+ TLE+L +++T + I +S L NL L
Sbjct: 172 SLNNLDMLKRLCL-RSNNVDNNDVCHLFSVGTLEELAITDT-MQLTNIRGISRLTNLMCL 229
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
+L + D + + KL L + S+ +N T T +
Sbjct: 230 ELNSTDIDDTCIGEISACAKLSKLSV--SECNN------------------ITDATPISQ 269
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+++LE LNL++C I +G I L + LS + V ++
Sbjct: 270 LAALEELNLNSCY--HITKG-----------------IGTLGMLLRLRMLDLSGVPVEDN 310
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
L C +LE L++S + D + + LNL+ R + G+ ++
Sbjct: 311 CLKDLC---DCGSLERLNISYCIQLTDINPLSNATA--IEELNLNGCRRITRGIDVVWA- 364
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------------IQQ 393
LP L + + + + ++ + SL + + N GF IQ+
Sbjct: 365 LPKLRVFHMKDVHLSEPSLDSVGTGGSLVKVSLDNC--AGFGDMSLLSSIVTLEELNIQK 422
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-L 452
D++ + L L +L LN+++ +S + K L+ L++ S+T +S +
Sbjct: 423 CA---DIISGVGCLGTLPYLRVLNIKEVHISSLDFTGIGASKSLLQLNME--SITGLSNV 477
Query: 453 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L+++ L LS+ ++G+G LK+LDL G
Sbjct: 478 EALANILTLEKLSLHGCTDIDAGIGCLGNLPQLKVLDLSG 517
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 188/455 (41%), Gaps = 104/455 (22%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
++ E + ++ + L +LN+A C+ +T + AL+ +T L+EL+L C + G++ L
Sbjct: 805 INDEKIRHVSECKSLNTLNLAFCKDITD--VTALSKITMLEELNLDCCPNIR-KGIETLG 861
Query: 138 SISTLEKLWLSETGLTADGIA----LLSSLQNLSVLDL----GGLPVTDL---------- 179
++ L + E + DG A +L + ++L L+L G + V L
Sbjct: 862 TLPKARILSMKECYM-GDGYAQQCSILGNSKSLVKLNLERSRGRISVKALSDIATLEELV 920
Query: 180 --------VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA---W-TGVTKL 227
+ S L +L L+L + ++ + L LNL+ W T ++ L
Sbjct: 921 LDHAREVCCIPSFSCLPRLRVLNLKYTDINGDATKNISESKSLRSLNLSHCKWVTDISVL 980
Query: 228 PNISSLECLNLSNCTIDSILEGNEN--KAPLAKISLAGTTFINERE-AFLYIETSLLSFL 284
++S+LE LN++ C ++I +G E+ K PL ++++ T I ++ A L L+
Sbjct: 981 SSLSTLEELNVNCC--NAIRKGWESLGKLPLLRVAILSDTNITAKDIACLSSCKKLVKLK 1038
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
LS + ++++LE L +V L+ LN
Sbjct: 1039 FFRCKKLSDVTVVYKIQSLEEL-------------IVKNCSGGLKGLNA----------- 1074
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 404
G LP L L L ++S +DI ++ +G LV
Sbjct: 1075 --LGTLPRLRFLHLR---------------------NVSGSDIS--VESIGTSKSLV--- 1106
Query: 405 TALQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
RLN+E + +++D T PLS L LSLR + L L +L +
Sbjct: 1107 ----------RLNIETREELTDTT--PLSNITSLEELSLRKCGNNLEGVGTLGKLPRLRS 1154
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
L + + + +S L RS+ L+L W LT+
Sbjct: 1155 LYLGLSRINDSTLYYICLSRSITSLNLASSWKLTD 1189
>gi|290972583|ref|XP_002669031.1| predicted protein [Naegleria gruberi]
gi|284082572|gb|EFC36287.1| predicted protein [Naegleria gruberi]
Length = 369
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 139/331 (41%), Gaps = 37/331 (11%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
A +R L + + + + M+ L ELD+ RC ++ G+K L+ + L L
Sbjct: 20 AISEMRQLTKLGINGIQDNDMRQIGMMSQLTELDIERC-DISGEGIKFLIVMPQLTSLNG 78
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
L L+S + L+ LD+ + + + L +L LD+ + + + GA
Sbjct: 79 GYNYLQCGDAKLISEMSKLTKLDINTNEIGTEGAKYISTLNQLTELDIGNNNILSEGAKF 138
Query: 208 LKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS---------------NCTIDSIL 247
++ L LN+ G + + L L++ N I+ +
Sbjct: 139 IRNLKNLVKLNVERNNIGDEGANYISEMKQLTALDIGFNMFGFEGIKAISQLNHLIELSI 198
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
+GNE I++ G I E++ + + F D LS+ ++QM L LD
Sbjct: 199 QGNE-------ITINGVKLITEKKNLTSLNLGNI-FYDTKTPELSQ--LVSQMHQLTTLD 248
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
+ ++ IG + ++A + NL++LN++ G+ + L L L++ G QIDD
Sbjct: 249 IENNNIGPEVANLLAEM-KNLKHLNIAFNNIEKEGLSHIT-QLTQLTSLNVCGNQIDDEG 306
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
+S M L ++I + F+ + G ET
Sbjct: 307 AKIVSSMKQLLKLNIE----ENFLNEGGCET 333
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 151/352 (42%), Gaps = 50/352 (14%)
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
ET T+ I +S ++ L+ L + G+ D+ R + ++++L LD+ +S G L
Sbjct: 10 ETNDTSSSIEAISEMRQLTKLGINGIQDNDM--RQIGMMSQLTELDIERCDISGEGIKFL 67
Query: 209 KMFPRLSFLNLAWT----GVTKL-PNISSLECLNLSNCTIDSILEGNENKAPLAKIS--- 260
+ P+L+ LN + G KL +S L L+++ I + EG + + L +++
Sbjct: 68 IVMPQLTSLNGGYNYLQCGDAKLISEMSKLTKLDINTNEIGT--EGAKYISTLNQLTELD 125
Query: 261 LAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
+ ++E F+ +L+ ++ +N ++++MK L LD+ +M G + ++
Sbjct: 126 IGNNNILSEGAKFIRNLKNLVKLNVERNNIGDEGANYISEMKQLTALDIGFNMFGFEGIK 185
Query: 320 MVACVG-----------------------ANLRNLNLSNTRFSSAG--VGILAGHLPNLE 354
++ + NL +LNL N + + + L + L
Sbjct: 186 AISQLNHLIELSIQGNEITINGVKLITEKKNLTSLNLGNIFYDTKTPELSQLVSQMHQLT 245
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 414
L + I + ++ M +LK ++I+ +I+ L+ + L L
Sbjct: 246 TLDIENNNIGPEVANLLAEMKNLKHLNIAFNNIEKE------------GLSHITQLTQLT 293
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
LN+ Q+ D +S+ K+L+ L++ L + + + +LT L I
Sbjct: 294 SLNVCGNQIDDEGAKIVSSMKQLLKLNIEENFLNEGGCETIIEMPQLTQLYI 345
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 47/273 (17%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ +E ++ + L LNV + + ++ M L LD+ + G+
Sbjct: 127 GNNNILSEGAKFIRNLKNLVKLNV-ERNNIGDEGANYISEMKQLTALDIGFNM-FGFEGI 184
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-------PVTDLVLRSLQV 186
K + ++ L +L + +T +G+ L++ +NL+ L+LG + ++ LV + Q+
Sbjct: 185 KAISQLNHLIELSIQGNEITINGVKLITEKKNLTSLNLGNIFYDTKTPELSQLVSQMHQL 244
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNC 241
T LD+ + + A +L L LN+A+ + K + ++ L LN+
Sbjct: 245 TT----LDIENNNIGPEVANLLAEMKNLKHLNIAFNNIEKEGLSHITQLTQLTSLNVCGN 300
Query: 242 TIDSILEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLT 298
ID EG AKI S+ +N E FL C +
Sbjct: 301 QIDD--EG-------AKIVSSMKQLLKLNIEENFLN----------------EGGCETII 335
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
+M L L +SS+ IG+ VEM+ C NLR++
Sbjct: 336 EMPQLTQLYISSNRIGEKQVEMI-CGKKNLRDI 367
>gi|157873267|ref|XP_001685146.1| hypothetical protein LMJF_31_1600 [Leishmania major strain
Friedlin]
gi|68128217|emb|CAJ08348.1| hypothetical protein LMJF_31_1600 [Leishmania major strain
Friedlin]
Length = 811
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 194/437 (44%), Gaps = 78/437 (17%)
Query: 62 VFKHNAEAI-----ELRGENSVDAEW--MAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
V H+ AI + G+ + W ++ L + + LR L++ +C+ A +
Sbjct: 248 VHPHSVVAIGNAERQGNGQPPPPSNWVPLSDLASLQKLRRLDMTNCKGDFDCA--GIARC 305
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
L+ + LS C V DA + HL + +E+L LS T +T + L++ + L ++ L
Sbjct: 306 CFLRSVHLSGC-NVKDADVPHLAQLPCVEELLLSRTRIT--NVQALAAGKGLRIIQLSNA 362
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
V + LQ L L LDL + VS+ L L +LNLA T VT
Sbjct: 363 QVDSDGIDGLQTLPYLTRLDLSSTLVSD--VNCLGQSQSLIYLNLAKTHVT--------- 411
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 294
+E A L+++ L +E L ++N+++
Sbjct: 412 ---------------SEGIAGLSRL--------------LTLE-----HLMLNNNNIRDV 437
Query: 295 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
FL + +L+ L L S+++ +E + + L++L+L++TR ++ H NL
Sbjct: 438 SFLAESHSLKTLSLQSTLVDSAGLEGLGRL-RTLQDLSLAHTRVTNV---TKLQHCRNLW 493
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 414
L L G+ +D I + +P L+ + +S TD+ A +L+L +L E
Sbjct: 494 RLDLQGSFVDQAGIVGLERLPKLRVLVLSKTDV--------ASLELILKSESL------E 539
Query: 415 RLNLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
+L ++ + V++ + F ++ L ++L + ++D+ + L +L L++ + +T+
Sbjct: 540 QLEVKFSHVNERSAFFGVTKASALTDVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTS 597
Query: 474 SGLGSFKPPRSLKLLDL 490
G+ RSL+ +DL
Sbjct: 598 EGIAGLCDARSLQEVDL 614
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 174/410 (42%), Gaps = 57/410 (13%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR--CVKVTDAGMKHLLSISTLE 143
LG + L LN+A VTS + L+ + L+ L L+ V+ H L +L+
Sbjct: 394 LGQSQSLIYLNLAK-THVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQ 452
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
+ GL +G+ L +LQ+LS L VT++ LQ L LDL GS V
Sbjct: 453 STLVDSAGL--EGLGRLRTLQDLS---LAHTRVTNVT--KLQHCRNLWRLDLQGSFVDQA 505
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNL--SNCTIDSILEGNENKAPLAK 258
G L+ P+L L L+ T V L I SLE L + S+ S G + L
Sbjct: 506 GIVGLERLPKLRVLVLSKTDVASLELILKSESLEQLEVKFSHVNERSAFFGVTKASALTD 565
Query: 259 ISLAGTTFINEREAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLDLSSSMIGD- 315
++L + + E LL+ V++ ++ C ++L+ +DL+ + + D
Sbjct: 566 VTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLC---DARSLQEVDLAETAVTDI 622
Query: 316 ----------------DSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILS 357
SV + +GA LR L+++ T SS + L+ LEIL+
Sbjct: 623 SPLLSCTKIQALILYRSSVRSLDGIGALQQLRRLDIAETSVSS--IRSLSA-CQRLEILN 679
Query: 358 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
LS T +DD + SLK + +S T I QVG L +HLE L+
Sbjct: 680 LSNTAVDDDGFQGIGQAQSLKVVSMSFTAIT----QVG----------QLGQCSHLEELH 725
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
+ V+ L L L+ L+L L + +L++ KL L+++
Sbjct: 726 AQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTNCRKLLKLNVK 774
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 182/418 (43%), Gaps = 44/418 (10%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
+LRS++++ C V + + L + C++EL LSR ++T+ ++ L + L + LS
Sbjct: 307 FLRSVHLSGCN-VKDADVPHLAQLPCVEELLLSR-TRITN--VQALAAGKGLRIIQLSNA 362
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+ +DGI L +L L+ LDL V+D + L L YL+L + V++ G A L
Sbjct: 363 QVDSDGIDGLQTLPYLTRLDLSSTLVSD--VNCLGQSQSLIYLNLAKTHVTSEGIAGLSR 420
Query: 211 FPRLSFL---NLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTF 266
L L N V+ L SL+ L+L + +DS LEG L +SLA T
Sbjct: 421 LLTLEHLMLNNNNIRDVSFLAESHSLKTLSLQSTLVDSAGLEGLGRLRTLQDLSLAHTRV 480
Query: 267 IN--------------------EREAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEH 305
N ++ + +E L L +S + ++ + + ++LE
Sbjct: 481 TNVTKLQHCRNLWRLDLQGSFVDQAGIVGLERLPKLRVLVLSKTDVASLELILKSESLEQ 540
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L++ S + + S + L ++ L++ S G L +L++ +++
Sbjct: 541 LEVKFSHVNERSAFFGVTKASALTDVTLTHCDVSDINN---LGMCKELRLLNVWSSKVTS 597
Query: 366 YAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLN 417
I+ + SL+ +D++ T + IQ + V SL + L L RL+
Sbjct: 598 EGIAGLCDARSLQEVDLAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALQQLRRLD 657
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
+ +T VS ++ LS + L L+L N ++ D + L +S+ +T G
Sbjct: 658 IAETSVS--SIRSLSACQRLEILNLSNTAVDDDGFQGIGQAQSLKVVSMSFTAITQVG 713
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA---CVGANLRNLNLSNTRFSSA 341
D + ++R CFL + LS + D V +A CV L LS TR ++
Sbjct: 296 DFDCAGIARCCFL------RSVHLSGCNVKDADVPHLAQLPCV----EELLLSRTRITNV 345
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
+ AG L I+ LS Q+D I + +P L +D+S+T LV
Sbjct: 346 Q-ALAAGK--GLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSST--------------LV 388
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
+ L L LNL +T V+ + LS L HL L N ++ DVS L+ L
Sbjct: 389 SDVNCLGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSF--LAESHSL 446
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 506
LS++ ++ ++GL R+L+ L L +T LQ C+
Sbjct: 447 KTLSLQSTLVDSAGLEGLGRLRTLQDLSL-AHTRVTNVTKLQHCR 490
>gi|46446775|ref|YP_008140.1| hypothetical protein pc1141 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400416|emb|CAF23865.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 194
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 30 QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRG--ENS--VDAEWMAY 85
R L L +L +++ L+ + + ++ KH + IE EN+ DA +A
Sbjct: 52 HRCQLNTLKNYLEFTVVSELLNQTSLLTEFEKILKHFSNEIEALNFSENTYLTDAHLLAL 111
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G + L+ L++ C +T L LT +T L+ LDLS C K+TD G+ HL +++ L++L
Sbjct: 112 KGC-KNLKILHLEKCWDLTDDGLAHLTPLTSLQHLDLSSCKKLTDKGLAHLTTLTILQRL 170
Query: 146 WLSET-GLTADGIALLSSLQNL 166
LS LT DG+A L++L L
Sbjct: 171 DLSYCENLTKDGLAYLTTLTGL 192
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A+L L+ L+++ C+++T L LT +T L+ LDLS C +T G+ +L +++ L
Sbjct: 133 LAHLTPLTSLQHLDLSSCKKLTDKGLAHLTTLTILQRLDLSYCENLTKDGLAYLTTLTGL 192
Query: 143 E 143
+
Sbjct: 193 Q 193
>gi|405971309|gb|EKC36154.1| UBX domain-containing protein 1 [Crassostrea gigas]
Length = 852
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 168/354 (47%), Gaps = 37/354 (10%)
Query: 86 LGAFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
L A RY +++L++ C +T + L LT + LK L+LS C ++TD ++ + + L
Sbjct: 469 LHAVRYHCQIQTLSLNSCSLITDAGLLELTSLKKLKHLNLSGCRQLTDKCLEIVKEMPGL 528
Query: 143 EKLWLSETGLTADG-IALLSSLQ-NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L TG+T G I ++ SL +L VL+L + +T+ +L L+ L L+ L L +++
Sbjct: 529 VSLNLDGTGVTESGFIGIILSLPASLQVLNLNRMNITEKLLTHLKDLENLKVLCLEHTKI 588
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNLSN---CTIDSILEGNENKA 254
G + ++ L L+++ T + L +L CL ++N D L+ +N
Sbjct: 589 C--GLSGVEQLKSLETLDVSQTDIVSESLLCLGDNLTCLGIANTERVNGDLALQYIQNN- 645
Query: 255 PLAKISLAGTTFINEREAFLYIE---TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
L + +A T +N A YI+ LS ++ + F++ M L LDL++
Sbjct: 646 -LTCLGIANTERVNGDLALQYIQRLSLRSLSLPSRLTTTDTGLQFISHM-PLTELDLTNF 703
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
+ + + LR L LSNT+ + AG+ L L +L+IL L T + D +
Sbjct: 704 I-------NIFKMYPRLRKLLLSNTKITDAGMNKLKD-LKDLQILYLDRTLVTDACSEVI 755
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
L + +++T I T L AL + + L +LNL +T VS+
Sbjct: 756 KCFQGLVELSLASTGI----------TSQFLCNGALDSCHDLSKLNLCRTLVSN 799
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 134/314 (42%), Gaps = 47/314 (14%)
Query: 176 VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTK-------- 226
+TD L L L KL++L+L G Q++++ ++K P L LNL TGVT+
Sbjct: 489 ITDAGLLELTSLKKLKHLNLSGCRQLTDKCLEIVKEMPGLVSLNLDGTGVTESGFIGIIL 548
Query: 227 -LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 285
LP +SL+ LNL+ I L T + + E L L
Sbjct: 549 SLP--ASLQVLNLNRMNITEKL----------------LTHLKDLEN--------LKVLC 582
Query: 286 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
+ ++ + + Q+K+LE LD+S + I +S+ C+G NL L ++NT + +
Sbjct: 583 LEHTKICGLSGVEQLKSLETLDVSQTDIVSESL---LCLGDNLTCLGIANTERVNGDLA- 638
Query: 346 LAGHLPNLEILSLSGTQI--DDYAISYMSMMPSLKFIDI---SNTDIK-GFIQQVG-AET 398
L NL L ++ T+ D A+ Y+ + + TD FI + E
Sbjct: 639 LQYIQNNLTCLGIANTERVNGDLALQYIQRLSLRSLSLPSRLTTTDTGLQFISHMPLTEL 698
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
DL + + L +L L T+++DA + L K+L L L +TD +
Sbjct: 699 DLTNFINIFKMYPRLRKLLLSNTKITDAGMNKLKDLKDLQILYLDRTLVTDACSEVIKCF 758
Query: 459 SKLTNLSIRDAVLT 472
L LS+ +T
Sbjct: 759 QGLVELSLASTGIT 772
>gi|290980071|ref|XP_002672756.1| predicted protein [Naegleria gruberi]
gi|284086335|gb|EFC40012.1| predicted protein [Naegleria gruberi]
Length = 385
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 145/314 (46%), Gaps = 25/314 (7%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + + L SL++ D ++ ++GM L LD++R ++ G K
Sbjct: 52 NQIGVEGAKLISGMKSLISLSIGD-NQIGVEGAKLISGMKHLTSLDINRN-QIGVEGAKS 109
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + + A+G +S ++ L+ LD+GG + + + + +L LD+
Sbjct: 110 ISRMKQLTSLNIYYNQIGAEGAKSISGMKQLTSLDIGGNQIGVEESKYISEMKQLTSLDI 169
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+ +Q+ GA + +L+ LN+ + GV IS E L++ I S NE
Sbjct: 170 YNNQIGVEGAKSISGMKQLTSLNIGFNRIGVEGSKLIS--EMKQLTSLNIGS----NE-- 221
Query: 254 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 313
I + G+ FI E + TSL + + S+ ++++MK L LD+ + I
Sbjct: 222 -----IGVEGSKFIPEMKHL----TSLNIYYNEIGDEGSK--YISEMKQLTSLDIYYNEI 270
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
G + + ++ + L +L +S+ + G ++ + L L ++ QI D ++S
Sbjct: 271 GVEGAKYISEM-KQLTSLGISDNQIGVEGAKFIS-EMKLLTSLDIADNQIGDEGSKFISE 328
Query: 374 MPSLKFIDISNTDI 387
M SL +++++ I
Sbjct: 329 MKSLTSLNVNSNQI 342
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 174/378 (46%), Gaps = 37/378 (9%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC-VKVTDA----GM 133
+ + + ++ ++L SL++AD ++ ++GM L L++ R + V A GM
Sbjct: 7 EEDKLKFISEMKHLTSLDIAD-NQIGDEGSKFISGMKHLTSLNIDRNQIGVEGAKLISGM 65
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K L+S+S + + + +G L+S +++L+ LD+ + +S+ + +L L
Sbjct: 66 KSLISLS------IGDNQIGVEGAKLISGMKHLTSLDINRNQIGVEGAKSISRMKQLTSL 119
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLE---CLNLSNCTIDSILE 248
+++ +Q+ GA + +L+ L++ GV + IS ++ L++ N I +E
Sbjct: 120 NIYYNQIGAEGAKSISGMKQLTSLDIGGNQIGVEESKYISEMKQLTSLDIYNNQIG--VE 177
Query: 249 GNENKAPLAKISLAGTTF--INEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALE 304
G ++ + + +++ F I + L E L+ L++ ++ + F+ +MK L
Sbjct: 178 GAKSISGMKQLTSLNIGFNRIGVEGSKLISEMKQLTSLNIGSNEIGVEGSKFIPEMKHLT 237
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
L++ + IGD+ + ++ + L +L++ G ++ + L L +S QI
Sbjct: 238 SLNIYYNEIGDEGSKYISEM-KQLTSLDIYYNEIGVEGAKYIS-EMKQLTSLGISDNQIG 295
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
++S M L +DI++ Q+G E +S + L LN+ Q+
Sbjct: 296 VEGAKFISEMKLLTSLDIADN-------QIGDEGSKFIS-----EMKSLTSLNVNSNQIG 343
Query: 425 DATLFPLSTFKELIHLSL 442
D +S K+L L +
Sbjct: 344 DEGAKLISGMKQLTSLKI 361
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
+ F+++MK L LD++ + IGD+ + ++ + +L +LN+ + G +++G + +
Sbjct: 10 KLKFISEMKHLTSLDIADNQIGDEGSKFISGM-KHLTSLNIDRNQIGVEGAKLISG-MKS 67
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
L LS+ QI +S M L +DI+ Q+G E ++ +
Sbjct: 68 LISLSIGDNQIGVEGAKLISGMKHLTSLDINRN-------QIGVE-----GAKSISRMKQ 115
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
L LN+ Q+ +S K+L L + + +S + +LT+L I + +
Sbjct: 116 LTSLNIYYNQIGAEGAKSISGMKQLTSLDIGGNQIGVEESKYISEMKQLTSLDIYNNQIG 175
Query: 473 NSGLGSFKPPRSLKLLDL 490
G S + L L++
Sbjct: 176 VEGAKSISGMKQLTSLNI 193
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 162/381 (42%), Gaps = 43/381 (11%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M L LD++ ++ D G K + + L L + + +G L+S +++L L +G
Sbjct: 17 MKHLTSLDIADN-QIGDEGSKFISGMKHLTSLNIDRNQIGVEGAKLISGMKSLISLSIGD 75
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNIS 231
+ + + + L LD+ +Q+ GA + +L+ LN+ + G +IS
Sbjct: 76 NQIGVEGAKLISGMKHLTSLDINRNQIGVEGAKSISRMKQLTSLNIYYNQIGAEGAKSIS 135
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
++ L ++D + GN+ I + + +I+E + L+ LD+ N+ +
Sbjct: 136 GMKQL----TSLD--IGGNQ-------IGVEESKYISEMKQ--------LTSLDIYNNQI 174
Query: 292 S--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
++ MK L L++ + IG + ++++ + L +LN+ + G +
Sbjct: 175 GVEGAKSISGMKQLTSLNIGFNRIGVEGSKLISEM-KQLTSLNIGSNEIGVEGSKFIP-E 232
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
+ +L L++ +I D Y+S M L +DI + ++G E +S
Sbjct: 233 MKHLTSLNIYYNEIGDEGSKYISEMKQLTSLDI-------YYNEIGVEGAKYIS-----E 280
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
+ L L + Q+ +S K L L + + + D +S + LT+L++
Sbjct: 281 MKQLTSLGISDNQIGVEGAKFISEMKLLTSLDIADNQIGDEGSKFISEMKSLTSLNVNSN 340
Query: 470 VLTNSG---LGSFKPPRSLKL 487
+ + G + K SLK+
Sbjct: 341 QIGDEGAKLISGMKQLTSLKI 361
>gi|84043404|ref|XP_951492.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348240|gb|AAQ15567.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62358736|gb|AAX79191.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1394
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 193/460 (41%), Gaps = 88/460 (19%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ S + ++ L +L +S C +TDA + +S LE+L L+ GI L
Sbjct: 236 IDDSCIGEISACAKLSKLSVSECNNITDA--TPISQLSALEELNLNSCYHITKGIGTLGM 293
Query: 163 LQNLSVLDLGGLPVTDLVLR------SLQVL-----------------TKLEYLDLWGSQ 199
L L +LDL G+PV D L+ SL+ L T +E L+L G +
Sbjct: 294 LLRLRILDLSGVPVEDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCR 353
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
RG V+ P+L L++ ++LS ++DS+ G PL K+
Sbjct: 354 RITRGIGVVWALPKLRVLHMKD--------------VHLSEPSLDSVGTG----GPLVKV 395
Query: 260 SLAGTTFINEREAFLYIET----------------------SLLSFLDVSNSSLSRFCF- 296
SL + I T L L++ + +S F
Sbjct: 396 SLDNCAGFGDMTLLSSIVTLEELNIQKCADIISGVGSLGTLPYLRVLNIKEAHISSLDFT 455
Query: 297 -LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
+ K+L L++ S+ G VE +A + L L+L AG+G L G+LP L++
Sbjct: 456 GIGASKSLLQLNM-ESITGLIDVEALANI-LTLEKLSLHGCTGIDAGIGCL-GNLPQLKM 512
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS-------- 403
L LSGT D+ ++ + + ++ +++S+ T++ I + A +L LS
Sbjct: 513 LDLSGTNTDNESLRSLCLSQTVVSLNLSHCWKMTNVS-HISSLEALNELNLSNCFGINAG 571
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLT 462
A++ L L L T ++D + S K L+ L L + L DV+ LS+++ L
Sbjct: 572 WEAIEKLQQLHVAILSNTHITDRNISHFSKCKNLVTLDLSFCNKLLDVT--ALSNITTLE 629
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
L++ GL L +L++ G L ED+++
Sbjct: 630 ELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQL--EDSVI 667
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 178/413 (43%), Gaps = 64/413 (15%)
Query: 92 LRSLNVADCRRVTSS--ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ LN+ CRR+T +WAL + L D V +++ + + + L K+ L
Sbjct: 344 IEELNLNGCRRITRGIGVVWALPKLRVLHMKD----VHLSEPSLDSVGTGGPLVKVSLDN 399
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLV--LRSLQVLTKLEYLDLWGSQVSNRGAAV 207
D + LLSS+ L L++ D++ + SL L L L++ + +S+
Sbjct: 400 CAGFGD-MTLLSSIVTLEELNIQ--KCADIISGVGSLGTLPYLRVLNIKEAHISSLDFTG 456
Query: 208 LKMFPRLSFLNL-AWTG---VTKLPNISSLECLNLSNCT-IDSILEGNENKAPLAKISLA 262
+ L LN+ + TG V L NI +LE L+L CT ID+ + N L + L+
Sbjct: 457 IGASKSLLQLNMESITGLIDVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLS 516
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNS-SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 321
GT NE L + +++S L++S+ ++ ++ ++AL L+LS+
Sbjct: 517 GTNTDNESLRSLCLSQTVVS-LNLSHCWKMTNVSHISSLEALNELNLSN----------- 564
Query: 322 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 381
C G N AG + L L + LS T I D IS+ S +L +D
Sbjct: 565 -CFGIN-------------AGWEAIE-KLQQLHVAILSNTHITDRNISHFSKCKNLVTLD 609
Query: 382 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 441
+S F ++ L +TAL N+ LE LNL+ L L L L+
Sbjct: 610 LS------FCNKL-------LDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLN 656
Query: 442 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR---SLKLLDLH 491
++ L D + L + L +S+ D +G G P +L+ L+LH
Sbjct: 657 IKGVQLEDSVIVSLGNGGSLVKVSLDDC----AGFGDVTPLSNLVTLEELNLH 705
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 164/400 (41%), Gaps = 71/400 (17%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L + LK L L R + + +HL +I TLE+L +++T + I +S L NL L
Sbjct: 172 SLNNLDMLKRLCL-RSNNIDNNDARHLFNIGTLEELAITDT-MQLTNIRGISRLTNLKCL 229
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
+L + D + + KL L + S+ +N T T +
Sbjct: 230 ELNSTDIDDSCIGEISACAKLSKLSV--SECNN------------------ITDATPISQ 269
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+S+LE LNL++C I +G I L + LS + V ++
Sbjct: 270 LSALEELNLNSCY--HITKG-----------------IGTLGMLLRLRILDLSGVPVEDN 310
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
L C +LE L++S + D + + LNL+ R + G+G++
Sbjct: 311 CLKDLC---DCGSLERLNISYCIQLTDINPLSNATA--IEELNLNGCRRITRGIGVVWA- 364
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------------IQQ 393
LP L +L + + + ++ + L + + N GF IQ+
Sbjct: 365 LPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNC--AGFGDMTLLSSIVTLEELNIQK 422
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSL 452
D++ + +L L +L LN+++ +S + K L+ L++ + + L DV
Sbjct: 423 CA---DIISGVGSLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMESITGLIDV-- 477
Query: 453 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L+++ L LS+ ++G+G LK+LDL G
Sbjct: 478 EALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 517
>gi|303286333|ref|XP_003062456.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455973|gb|EEH53275.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 519
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 196/464 (42%), Gaps = 61/464 (13%)
Query: 57 PSLLE-VFKHNAEAIELRGENSVDAEWMAYLGAFR--YLRSLNVADCRRVTSSALWALTG 113
P L + VF A A EL +VDA LG F +L + D VT + L AL
Sbjct: 3 PDLAQRVFDVLARANEL----TVDA-----LGRFEGCFLSDASGLDANVVTDAFLAALRD 53
Query: 114 M-TCLKELDLSRCVKVTDAGMK-HLLSISTLEKLWLSE-TGLTADGIALLSSLQNL-SVL 169
+ T L +DL+ C +T G++ + + + + +SE G+ D +A ++S +L S
Sbjct: 54 VATSLSRIDLTGCDALTSGGLRSNFPCCARMTIVNVSECAGVDDDALAAMASATHLKSFF 113
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
G VT +R L LT L L F R + L G+ L
Sbjct: 114 CEGNDAVTGSGVRHLASLTSLRELS----------------FERCARLR---EGMCHLAG 154
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+ +L LNL C S E + P S + IE SL +N+
Sbjct: 155 LRNLRSLNLGWCGKLSAKETSRALTPFFPASASAPRST-------PIELSLART--GANA 205
Query: 290 SLSRFCFLTQMKA-LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
+R L Q+ L L++S + DD++ + + NLR+L+L R S GV L G
Sbjct: 206 DTARA--LGQLAGRLVALNVSGCAMNDDALHFLGGL-INLRSLSLERCRVSDVGVRQLCG 262
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
L +L L+L T++ + + ++ + L+ + N D G + G E +
Sbjct: 263 -LRDLRELNLGYTRVTNDGVLALAPLTELRVV---NLDSLGDVGDAGMEV--------AR 310
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
LE L + T V D + L + L L+L ++TD L L ++ L NL++
Sbjct: 311 RWEKLESLCVSDTGVGDGGVRKLKSCARLRDLNLGYTNVTDDGLEHLEDMTSLRNLNLDS 370
Query: 469 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 512
++T+ G+ +L +DL G + E A F K P++E
Sbjct: 371 RLITDDGVRHLANLGALTAIDLFGAKISDEGASRLF-KCTPKLE 413
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 124/281 (44%), Gaps = 49/281 (17%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R LR LN+ RVT+ + AL +T L+ ++L V DAGM+ LE L
Sbjct: 260 LCGLRDLRELNLG-YTRVTNDGVLALAPLTELRVVNLDSLGDVGDAGMEVARRWEKLESL 318
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S+TG+ G+ L S L L+LG VTD L L+ +T L L+L +++
Sbjct: 319 CVSDTGVGDGGVRKLKSCARLRDLNLGYTNVTDDGLEHLEDMTSLRNLNLDSRLITD--- 375
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
GV L N+ +L ++L AKIS
Sbjct: 376 ----------------DGVRHLANLGALTAIDLFG----------------AKIS----- 398
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFC---FLTQMKALEHLDLS-SSMIGDDSVEMV 321
+E + L+ T L L++ SL+ K ++ L++ ++ I DD V+ V
Sbjct: 399 --DEGASRLFKCTPKLERLELCGGSLTNVGVKRIAEHCKGMKTLNIGRNAKITDDCVDDV 456
Query: 322 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
+ L +LNL+ ++ +S GV LA LP L L++ G +
Sbjct: 457 VTM-RELTSLNLAFSKITSDGVRKLAA-LPCLTSLAIKGCE 495
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 182/438 (41%), Gaps = 92/438 (21%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD-----A 131
VD + +A + + +L+S VT S + L +T L+EL RC ++ + A
Sbjct: 94 GVDDDALAAMASATHLKSFFCEGNDAVTGSGVRHLASLTSLRELSFERCARLREGMCHLA 153
Query: 132 GMKHLLSI-----------------------------STLEKLWLSETGLTADGIALLSS 162
G+++L S+ ST +L L+ TG AD L
Sbjct: 154 GLRNLRSLNLGWCGKLSAKETSRALTPFFPASASAPRSTPIELSLARTGANADTARALGQ 213
Query: 163 LQN-LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L L++ G + D L L L L L L +VS+ G L L LNL +
Sbjct: 214 LAGRLVALNVSGCAMNDDALHFLGGLINLRSLSLERCRVSDVGVRQLCGLRDLRELNLGY 273
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 281
T VT D +L APL ++ + +L
Sbjct: 274 TRVTN-----------------DGVLA----LAPLTELRV----------------VNLD 296
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSS 340
S DV ++ + + + LE L +S + +GD V ++ +C A LR+LNL T +
Sbjct: 297 SLGDVGDAGME---VARRWEKLESLCVSDTGVGDGGVRKLKSC--ARLRDLNLGYTNVTD 351
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G+ L + +L L+L I D + +++ + +L ID+ F ++ E
Sbjct: 352 DGLEHLE-DMTSLRNLNLDSRLITDDGVRHLANLGALTAIDL-------FGAKISDEGAS 403
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF-KELIHLSL-RNASLTDVSLHQLSSL 458
L + LERL L +++ + ++ K + L++ RNA +TD + + ++
Sbjct: 404 RL----FKCTPKLERLELCGGSLTNVGVKRIAEHCKGMKTLNIGRNAKITDDCVDDVVTM 459
Query: 459 SKLTNLSIRDAVLTNSGL 476
+LT+L++ + +T+ G+
Sbjct: 460 RELTSLNLAFSKITSDGV 477
>gi|428225640|ref|YP_007109737.1| hypothetical protein GEI7407_2206 [Geitlerinema sp. PCC 7407]
gi|427985541|gb|AFY66685.1| leucine-rich repeat-containing protein [Geitlerinema sp. PCC 7407]
Length = 504
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 159/365 (43%), Gaps = 29/365 (7%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL-TADGIALLSSLQNLSVL 169
LT +T L L + + + ++ L + L++L G T ++ L +L NL L
Sbjct: 130 LTDVTVLGTLGTLQALNLRGNPVRDLRPLQGLQRLHTLTLGWSTVTDLSTLPTLPNLHQL 189
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
DL G V D+ RSL +LE L+L +++S+ + L N A T VT +
Sbjct: 190 DLSGSQVGDI--RSLAPQPRLETLNLSANRISSIALPAMPSLRSLDLENNALTRVTIPAS 247
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+ LE LNL+N I S+ G + A L ++SLA R L LD+S +
Sbjct: 248 MGKLESLNLANNAIASLQFGGQIPA-LRRLSLASNQLTEVRA---IASQPQLQELDLSFN 303
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
++ L + A+ L +S + D + L+ L+LS + L G
Sbjct: 304 QITDLGPLASLGAIRVLKISGNRPISDLRPLAGLT--TLQALDLSEASIRD--ITPLRG- 358
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLV 401
L NLE L LSG QI + +S + L ++ I I +Q + +++ +
Sbjct: 359 LRNLETLVLSGNQIQQ--LESLSGLNRLSYLAIGGNQISDLRAIAALYSLQTLMLDSNRI 416
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
S+ L +L L+ L L Q++D PL+ L L L +T+ +L+ L
Sbjct: 417 TSVRPLASLGQLKVLTLGNNQITDPA--PLAALTGLTVLQLPQNRITN-----FDALATL 469
Query: 462 TNLSI 466
TNL I
Sbjct: 470 TNLRI 474
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 154/350 (44%), Gaps = 56/350 (16%)
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
E T D A + L++ S LDLGG +TD L L L +L L L+ S +S+ L
Sbjct: 59 EVAQTPDCQAAAARLRSQSTLDLGGRGLTD--LSPLVSLPQLTGLSLYNSSLSD--LRPL 114
Query: 209 KMFPRLSFLNLAW---TGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAG 263
P L L+L++ T VT L + +L+ LNL + + L+G + L ++L G
Sbjct: 115 SSLPNLRALDLSYANLTDVTVLGTLGTLQALNLRGNPVRDLRPLQGLQR---LHTLTL-G 170
Query: 264 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS------ 317
+ + + + L LD+S S + L LE L+LS++ I +
Sbjct: 171 WSTVTDLSTLPTLPN--LHQLDLSGSQVGDIRSLAPQPRLETLNLSANRISSIALPAMPS 228
Query: 318 -------------VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 364
V + A +G L +LNL+N +S G G +P L LSL+ Q+
Sbjct: 229 LRSLDLENNALTRVTIPASMG-KLESLNLANNAIASLQFG---GQIPALRRLSLASNQLT 284
Query: 365 DYAISYMSMMPSLKFIDISNTDIK--GFIQQVGAETDLVLS-------LTALQNLNHLER 415
+ + ++ P L+ +D+S I G + +GA L +S L L L L+
Sbjct: 285 E--VRAIASQPQLQELDLSFNQITDLGPLASLGAIRVLKISGNRPISDLRPLAGLTTLQA 342
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
L+L + + D T PL + L L L+ + QL SLS L LS
Sbjct: 343 LDLSEASIRDIT--PLRGLRNLETL-----VLSGNQIQQLESLSGLNRLS 385
>gi|283777859|ref|YP_003368614.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
gi|283436312|gb|ADB14754.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Length = 1487
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 196/426 (46%), Gaps = 63/426 (14%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
++ +N+ DC+ + L ++ + LK L L +TDA + + + +L +L LS+T
Sbjct: 991 HVEKINLTDCKIGPDAPLASIAELANLKSLLLVGS-DITDAQLTSIAGLKSLSELSLSDT 1049
Query: 151 GLTADGI-ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+TA + LL+ L L L L G V VL ++ L KL +L L G +V+ ++LK
Sbjct: 1050 AVTAPAVNGLLAQLPQLQRLYLSGTKVDRGVLVAVTNLPKLSHLSLAGIEVAPSDLSLLK 1109
Query: 210 MFPRLSFLNLAWTGVT-----KLPNISSLECLN-----LSNCTIDSILEGNEN----KAP 255
P+L +L+L+ TG++ +L +SSL L L++ + ++ N P
Sbjct: 1110 KCPQLEWLDLSSTGLSDEASQQLVGLSSLRELAVPKNPLTDAGQEELIAAMPNCHVVGDP 1169
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR-FCFLTQMKALEHLDLSSSMIG 314
L LA +I E+ + ++T ++ S L R C + + E +L ++ +
Sbjct: 1170 LDPQRLA-ARWILEKRGTVELDTGAVT----SPKELPRDKCHVLAIDLAELANLKAAEV- 1223
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-------HLPNLEI------------ 355
++++A + L +L LS+T + A + + +L NL I
Sbjct: 1224 ---IQVIAGC-SELESLRLSDTAITDADLAAIGKLKLLKKLYLANLAITDDGLAKLAELE 1279
Query: 356 ----LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 411
L +SG +I ++ SL+ +++SNT + TD +L A+ +
Sbjct: 1280 LLEVLDVSGGRITGAGLANFRSASSLQELNLSNTML----------TDP--NLAAIAPMT 1327
Query: 412 HLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L L++ + VSDA L L+ +L L LR LTD + L+S +KL L +
Sbjct: 1328 SLISLDMSACRGVSDAGLKKLAGLTQLRSLGLRGTKLTDAAAESLASYAKLEQLDLDSTS 1387
Query: 471 LTNSGL 476
+ +SG+
Sbjct: 1388 IGDSGV 1393
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 32/278 (11%)
Query: 119 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
++D + C + D +K L++++ LE L LS T +T G+A L L +L +DLG LP+T
Sbjct: 870 KVDFAGCRTIGDDDLKPLVALADLESLALSGTKITPAGLANLHGLASLKSIDLGTLPLTT 929
Query: 179 LVLRSLQV------LTKLEYLDLWGSQ--VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 230
+ +L + + E D ++ +S G + S + L + T LP
Sbjct: 930 ASVETLAAALPDCKIERREPADKLVARWVLSVGGKCTITSDESASQVELT-SATTVLPEA 988
Query: 231 S-SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+ +E +NL++C I APLA I+ +++ LL D++++
Sbjct: 989 AIHVEKINLTDCKIGP-------DAPLASIA-----------ELANLKSLLLVGSDITDA 1030
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
L+ L + L D + + +V + L+ L LS T+ GV + +
Sbjct: 1031 QLTSIAGLKSLSELSLSD---TAVTAPAVNGLLAQLPQLQRLYLSGTKVDR-GVLVAVTN 1086
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
LP L LSL+G ++ +S + P L+++D+S+T +
Sbjct: 1087 LPKLSHLSLAGIEVAPSDLSLLKKCPQLEWLDLSSTGL 1124
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 176/390 (45%), Gaps = 32/390 (8%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
+ R VT S L +L L++L L+ +TD G+ L + +L KL L+ T +T G+
Sbjct: 679 EGRGVTDSDLASLELAPGLRQLSLA-ATPITDTGIASLAKLKSLAKLSLARTAITNKGLE 737
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
L+ L L+ LDL +TD L L L+KLE L L + +S+ G L M L L
Sbjct: 738 SLARLSQLAELDLSSTKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRLLV 797
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
+ T +++ + L + T D G + + +A + L ER A L +
Sbjct: 798 ASGTMLSERGHGVLTAALPQTEITWD----GADMQRQVALVLL-------ERGARLSVAD 846
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
+ + V + + ++K L+ IGDD ++ + + A+L +L LS T+
Sbjct: 847 MRGNIVPV--VARREDLPIGRLKVLKVDFAGCRTIGDDDLKPLVAL-ADLESLALSGTKI 903
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYM-SMMPSLKFIDISNTD--IKGFIQQVG 395
+ AG+ L G L +L+ + L + ++ + + +P K D + ++ VG
Sbjct: 904 TPAGLANLHG-LASLKSIDLGTLPLTTASVETLAAALPDCKIERREPADKLVARWVLSVG 962
Query: 396 -----------AETDLVLSLTALQNLN-HLERLNLEQTQVS-DATLFPLSTFKELIHLSL 442
++ +L + T L H+E++NL ++ DA L ++ L L L
Sbjct: 963 GKCTITSDESASQVELTSATTVLPEAAIHVEKINLTDCKIGPDAPLASIAELANLKSLLL 1022
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
+ +TD L ++ L L+ LS+ D +T
Sbjct: 1023 VGSDITDAQLTSIAGLKSLSELSLSDTAVT 1052
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 195/449 (43%), Gaps = 64/449 (14%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L + L L++A +T+ L +L ++ L ELDLS K+TD G+ LL++S L
Sbjct: 712 IASLAKLKSLAKLSLARTA-ITNKGLESLARLSQLAELDLS-STKITDQGLTRLLALSKL 769
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT-KLEYLDL-WGSQV 200
E+L+LS+ L+ +G+ L+ ++L +L G T L R VLT L ++ W
Sbjct: 770 ERLYLSDNSLSDNGLEQLAMAKSLRLLVASG---TMLSERGHGVLTAALPQTEITWDGAD 826
Query: 201 SNRGAA--VLKMFPRLSFLNLAWTGVT------KLPNISSLECLNLSNCTIDSILEGNEN 252
R A +L+ RLS ++ V LP I L+ L + +I G+++
Sbjct: 827 MQRQVALVLLERGARLSVADMRGNIVPVVARREDLP-IGRLKVLKVDFAGCRTI--GDDD 883
Query: 253 KAPLA------KISLAGTTFINEREAFLYIETSL----LSFLDVSNSSLSRFCFLTQMKA 302
PL ++L+GT A L+ SL L L ++ +S+
Sbjct: 884 LKPLVALADLESLALSGTKITPAGLANLHGLASLKSIDLGTLPLTTASVETLAAALPDCK 943
Query: 303 LEHLDLSSSMIG--------------DDSVEMVACVGA---------NLRNLNLSNTRFS 339
+E + + ++ D+S V A ++ +NL++ +
Sbjct: 944 IERREPADKLVARWVLSVGGKCTITSDESASQVELTSATTVLPEAAIHVEKINLTDCKIG 1003
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT-----DIKGFIQQV 394
L NL+ L L G+ I D ++ ++ + SL + +S+T + G + Q+
Sbjct: 1004 PDAPLASIAELANLKSLLLVGSDITDAQLTSIAGLKSLSELSLSDTAVTAPAVNGLLAQL 1063
Query: 395 GAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
L LS L A+ NL L L+L +V+ + L L +L L L +
Sbjct: 1064 PQLQRLYLSGTKVDRGVLVAVTNLPKLSHLSLAGIEVAPSDLSLLKKCPQLEWLDLSSTG 1123
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
L+D + QL LS L L++ LT++G
Sbjct: 1124 LSDEASQQLVGLSSLRELAVPKNPLTDAG 1152
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLP--NLEILSLS--GTQIDDYAISYMSMMPSLK 378
+G + N S F V LP +LEIL++ G + D ++ + + P L+
Sbjct: 643 ALGGRVTAANSSGREF----VATTPTELPAESLEILAIDFEGRGVTDSDLASLELAPGLR 698
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
+ ++ T I TD + +L L L +L+L +T +++ L L+ +L
Sbjct: 699 QLSLAATPI----------TDT--GIASLAKLKSLAKLSLARTAITNKGLESLARLSQLA 746
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
L L + +TD L +L +LSKL L + D L+++GL +SL+LL + G +L+E
Sbjct: 747 ELDLSSTKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRLL-VASGTMLSE 805
Query: 499 DAILQFCKMHPRIEV-W 514
P+ E+ W
Sbjct: 806 RGHGVLTAALPQTEITW 822
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 84 AYLGAFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
A L FR L+ LN+++ +T L A+ MT L LD+S C V+DAG+K L ++
Sbjct: 1294 AGLANFRSASSLQELNLSNTM-LTDPNLAAIAPMTSLISLDMSACRGVSDAGLKKLAGLT 1352
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L L T LT L+S L LDL + D + L LT L L L + V
Sbjct: 1353 QLRSLGLRGTKLTDAAAESLASYAKLEQLDLDSTSIGDSGVEKLLSLTSLRRLVLAKTSV 1412
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTK 226
++ G A L L ++L T VT+
Sbjct: 1413 TDGGVASLAKLKDLRSVSLVRTSVTE 1438
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L+ ++V+ S LS L + LE LDLSS+ + D++ + + + ++LR L + +
Sbjct: 1095 LAGIEVAPSDLS---LLKKCPQLEWLDLSSTGLSDEASQQLVGL-SSLRELAVPKNPLTD 1150
Query: 341 AGVGILAGHLPNLE---------------ILSLSGT-QIDDYAISYMSMMPSLKFIDISN 384
AG L +PN IL GT ++D A++ +P K +
Sbjct: 1151 AGQEELIAAMPNCHVVGDPLDPQRLAARWILEKRGTVELDTGAVTSPKELPRDK-CHVLA 1209
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
D+ AE V++ + LE L L T ++DA L + K L L L N
Sbjct: 1210 IDLAELANLKAAEVIQVIA-----GCSELESLRLSDTAITDADLAAIGKLKLLKKLYLAN 1264
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
++TD L +L+ L L L + +T +GL +F+ SL+ L+L
Sbjct: 1265 LAITDDGLAKLAELELLEVLDVSGGRITGAGLANFRSASSLQELNL 1310
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
S LE L LS+T +T +A + L+ L L L L +TD L L L LE LD+ G +
Sbjct: 1231 SELESLRLSDTAITDADLAAIGKLKLLKKLYLANLAITDDGLAKLAELELLEVLDVSGGR 1290
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI------SSLECLNLSNC--TIDSILEGNE 251
++ G A + L LNL+ T +T PN+ +SL L++S C D+ L+
Sbjct: 1291 ITGAGLANFRSASSLQELNLSNTMLTD-PNLAAIAPMTSLISLDMSACRGVSDAGLKKLA 1349
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
L + L GT D + SL+ + LE LDL S+
Sbjct: 1350 GLTQLRSLGLRGTKLT-----------------DAAAESLASYA------KLEQLDLDST 1386
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
IGD VE + + + R + L+ T + GV LA L +L +SL T + + A + +
Sbjct: 1387 SIGDSGVEKLLSLTSLRRLV-LAKTSVTDGGVASLA-KLKDLRSVSLVRTSVTEAACTEL 1444
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSG 360
+L+ L+LS++M+ D ++ +A + +L +L++S R S AG+ LAG L L L L G
Sbjct: 1304 SLQELNLSNTMLTDPNLAAIAPM-TSLISLDMSACRGVSDAGLKKLAG-LTQLRSLGLRG 1361
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
T++ D A ++ L+ +D+ +T I G E L L+ L +
Sbjct: 1362 TKLTDAAAESLASYAKLEQLDLDSTSIG----DSGVEKLLSLTSLRRLVL--------AK 1409
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
T V+D + L+ K+L +SL S+T+ + +L
Sbjct: 1410 TSVTDGGVASLAKLKDLRSVSLVRTSVTEAACTEL 1444
>gi|168030611|ref|XP_001767816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680898|gb|EDQ67330.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 628
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 190/411 (46%), Gaps = 35/411 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
R+L+ ++V C +V + + AL+ + L++L L C VTD+G+ L L L L
Sbjct: 109 RFLQDVDVTFCTQVGDAEVIALSELRHLQKLKLDSCRDVTDSGLSSLSRCKGLRILGLKY 168
Query: 150 -TGLTADGIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAA 206
+GL GI ++ Q L ++DL V+D L SL +L LE L L V+++G +
Sbjct: 169 CSGLGDFGIQNVAIGCQRLYIIDLSFTEVSDKGLASLALLKHLECLSLISCINVTDKGLS 228
Query: 207 VL----KMFPRLSF---LNLAWTGVTKLPNIS-SLECLNLSNCT-IDSILEGNENK-APL 256
L K +L+ LN++ G+ +L S L+ LNLS C I ++L + K L
Sbjct: 229 CLRNGCKSLQKLNVAKCLNVSSQGIIELTGSSVQLQELNLSYCKLISNVLFASFQKLKTL 288
Query: 257 AKISLAGTTFINEREAFL------YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
+ L G + + + E SL V+++ + +T L+ LDL+
Sbjct: 289 QVVKLDGCVIGDSNLSLIGSGCIELKELSLSKCQGVTDAGVVGV--VTSCTGLQKLDLTC 346
Query: 311 SM-IGDDSVEMVACVGANLRNLNLSNTRFSSA-GVGILAGHLPNLEILSLSGTQIDDYAI 368
I D +++ VA L +L + N +A G+ ++ LE L L+ ++D +
Sbjct: 347 CRDITDTALKAVATSCTGLLSLRMENCLLVTAEGLIMIGKSCVYLEELDLTDCNLNDNGL 406
Query: 369 SYMSMMPSLKFIDISNT-DIK-GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
+ L+ + + DI + +GA + T L+ L+ + + V A
Sbjct: 407 KSIGRCRGLRLLKVGYCMDITYAGLASIGA------TCTNLRELDCYRSVGISDEGV--A 458
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGL 476
+ ++++LS +S+TD SLH L+ LS L L +R +T++G+
Sbjct: 459 AIASGCKRLKVVNLSY-CSSITDASLHSLALLSDLVQLELRACSQITSAGI 508
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 70 IELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVK 127
+ELR + + + ++Y+GA ++LR L+V C+ V + AL+ G L++++LS
Sbjct: 495 LELRACSQITSAGISYIGASCKHLRELDVKRCKFVGDHGVLALSRGCRNLRQVNLSY-TA 553
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
VTDAGM + ++S ++ + L +T+ A
Sbjct: 554 VTDAGMMAIANMSCIQDMKLVHVNVTSSCFA 584
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 45/282 (15%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDA 131
+ + DA + + + L+ L++ CR +T +AL A+ T T L L + C+ VT
Sbjct: 320 KCQGVTDAGVVGVVTSCTGLQKLDLTCCRDITDTALKAVATSCTGLLSLRMENCLLVTAE 379
Query: 132 GMKHL-LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSL-QVLT 188
G+ + S LE+L L++ L +G+ + + L +L +G + +T L S+ T
Sbjct: 380 GLIMIGKSCVYLEELDLTDCNLNDNGLKSIGRCRGLRLLKVGYCMDITYAGLASIGATCT 439
Query: 189 KLEYLDLWGS-QVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
L LD + S +S+ G AA+ RL +NL++ C ++++
Sbjct: 440 NLRELDCYRSVGISDEGVAAIASGCKRLKVVNLSY-------------CSSITD------ 480
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
A L ++L E A I ++ +S++ S K L L
Sbjct: 481 -------ASLHSLALLSDLVQLELRACSQITSAGISYIGAS------------CKHLREL 521
Query: 307 DLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
D+ +GD V ++ NLR +NLS T + AG+ +A
Sbjct: 522 DVKRCKFVGDHGVLALSRGCRNLRQVNLSYTAVTDAGMMAIA 563
>gi|406831706|ref|ZP_11091300.1| peptidase M56 BlaR1 [Schlesneria paludicola DSM 18645]
Length = 1125
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 136/348 (39%), Gaps = 75/348 (21%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV--LDLGGL 174
LK +DL+ KH ISTLE LS + + LL ++ NL + L+LG
Sbjct: 805 LKNVDLTPASVARLGATKH---ISTLE---LSGRSINDE---LLQAISNLPIGRLELGSG 855
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
P TD ++ L LE + + G ++N L PRL + L + T +
Sbjct: 856 PYTDDGVKQLANCVALESISIAGPSITNDCFTHLVRLPRLRGVGLRSSQFTSGVLATLAR 915
Query: 235 CLNLSNCTIDSILEGNENKAPLAK---ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
+L TI + + + P ++ + G TF
Sbjct: 916 IPDLRRMTISTTEQLTFDLGPFSELRSVDFTGATF------------------------- 950
Query: 292 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 351
GDD +A L ++ N+ ++AGV L L
Sbjct: 951 ----------------------GDDLTHALAEKCPRLEEASIRNSSITNAGVAALVP-LR 987
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 411
+L +L+L QIDD + MP+L+++D++N DI G T L A +
Sbjct: 988 HLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDI-------GDRT-----LAAASGCS 1035
Query: 412 HLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSL 458
L LNL QTQ+S+ L + K + +LSL N LTD + L L
Sbjct: 1036 RLSYLNLGQTQISNEGLAVIGKLKNIRNLSLWSNQQLTDECVSHLKQL 1083
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 97 VADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDA----GMKHLLS--ISTLEKLWLSE 149
+ D RR+T S LT + EL R V T A + H L+ LE+ +
Sbjct: 916 IPDLRRMTISTTEQLTFDLGPFSEL---RSVDFTGATFGDDLTHALAEKCPRLEEASIRN 972
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ +T G+A L L++L VL L + D + S+Q + LE+LDL + +R A
Sbjct: 973 SSITNAGVAALVPLRHLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDIGDRTLAAAS 1032
Query: 210 MFPRLSFLNLAWTGVT--------KLPNISSL 233
RLS+LNL T ++ KL NI +L
Sbjct: 1033 GCSRLSYLNLGQTQISNEGLAVIGKLKNIRNL 1064
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 151/362 (41%), Gaps = 42/362 (11%)
Query: 174 LPVT-DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
+P++ D +L ++ +++ LDL V A+V ++ G TK +IS+
Sbjct: 781 IPISGDEILVDIETISRDRSLDLHLKNVDLTPASVARL------------GATK--HIST 826
Query: 233 LECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
LE LS +I D +L+ N P+ ++ L + ++ L +L S + ++ S+
Sbjct: 827 LE---LSGRSINDELLQAISN-LPIGRLELGSGPYTDDGVKQLANCVALES-ISIAGPSI 881
Query: 292 SRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
+ CF L ++ L + L SS + +A + +LR + +S T + +G +
Sbjct: 882 TNDCFTHLVRLPRLRGVGLRSSQFTSGVLATLARI-PDLRRMTISTTEQLTFDLGPFS-- 938
Query: 350 LPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
L + +G DD + P L+ I N+ I + AL
Sbjct: 939 --ELRSVDFTGATFGDDLTHALAEKCPRLEEASIRNSSITN------------AGVAALV 984
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
L HL L L++ Q+ D + L L L N + D +L S S+L+ L++
Sbjct: 985 PLRHLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDIGDRTLAAASGCSRLSYLNLGQ 1044
Query: 469 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 528
++N GL ++++ L L LT++ + K P + L + QI
Sbjct: 1045 TQISNEGLAVIGKLKNIRNLSLWSNQQLTDECVSHL-KQLPDYRMKFVLHLQLDGTQITK 1103
Query: 529 NG 530
NG
Sbjct: 1104 NG 1105
>gi|302853080|ref|XP_002958057.1| hypothetical protein VOLCADRAFT_99233 [Volvox carteri f.
nagariensis]
gi|300256635|gb|EFJ40897.1| hypothetical protein VOLCADRAFT_99233 [Volvox carteri f.
nagariensis]
Length = 581
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 141/555 (25%), Positives = 228/555 (41%), Gaps = 120/555 (21%)
Query: 7 SELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKH- 65
+E+ LCI A + +S+ SLE LPA L + L+ S L F+
Sbjct: 16 TEVQDLCIAAVAAAWDSLPA-----SSLEALPADLVQRVFDELLAAGRFSLSDLTRFREL 70
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRV---------------------- 103
+ + + L G V + + L LRSL++ C +V
Sbjct: 71 DLDTVVLVGRADVRNDRLRSLEKCSRLRSLDLTGCVQVSDVGVASLRRHGGLQRLRLSHC 130
Query: 104 ---TSSALWALTGMTCLKELDLSRCVKVT------------------------DAGMKHL 136
T +AL + G+T L+EL+L C +T G++HL
Sbjct: 131 VTLTDAALNHVRGLTGLQELELRECELITGEGLMQLSGLTQLKTLDLDQCRRIKGGLQHL 190
Query: 137 LSISTLEKL--------------WLSETG-----------LTADGIALLSSLQNLSVLDL 171
S+ L L WL E G +T G++ L++L L+ LDL
Sbjct: 191 TSLRHLATLRLGWCPLLGDSEVTWLRELGQLRELRLAYTQVTDVGVSHLAALTALTHLDL 250
Query: 172 GGLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFP-------RLSFLNLAWT 222
GG +TD LQ LT L+ L L+G Q N G A+L P LS+ +
Sbjct: 251 GGCTRLTDAAAAPLQRLTALQVLSLYGCGQFGNAGLAMLIAVPLLSLNSLTLSYTAVTTP 310
Query: 223 GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIE---T 278
G+T L ++S L L+L +C + D++ LA + L+ T+ + L + T
Sbjct: 311 GLTALSSLSRLTLLSLDSCAVGDAVCRVLRRLPRLANLDLSETSVGDGGLDALTVSGPPT 370
Query: 279 SL----LSFLDVSNSSLSRFC-FLTQ--------MKALEHLDLSSSMIGDDSVEMVACVG 325
SL L++ V+ + C F+T + L+ LDL S + D + V +
Sbjct: 371 SLTHLKLTYTKVNELGMPGKCVFITDEGLSKLSLLVGLQQLDLDSGTLTDACLRHVTGLS 430
Query: 326 ANLRNLNLSNTRFSSAGV---GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
A L L+L + R + AG G NL L G + D +++ + SL +++
Sbjct: 431 A-LTGLDLFSCRITDAGARLLGGSGHLGGNLRSLECCGGLLTDAGAVHLARLTSLTCLNL 489
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
S + GA+ SL A +L+ L+ L+L T ++ A L ++ L +LS+
Sbjct: 490 SQ---NARLGDAGAQ-----SLAA--SLSDLQELSLNHTNITSACLRDVAALPWLRYLSV 539
Query: 443 RNASLTDVSLHQLSS 457
N +TD ++ +L S
Sbjct: 540 SNTRVTDAAVAKLRS 554
>gi|410046126|ref|XP_003952131.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 14 [Pan
troglodytes]
Length = 568
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 182/401 (45%), Gaps = 52/401 (12%)
Query: 1 MERERESELVRLCIEAACQSGESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFP--- 57
M++ R +++ C +AA +SV + + L R L SL IRR I
Sbjct: 173 MDKGRAAQVCTACRDAAYH--KSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRR 230
Query: 58 SLLEVFKH--NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWA 110
SL V + N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L
Sbjct: 231 SLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGR 287
Query: 111 LTG-MTCLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLS 167
+ + L+ L+L C +T+ G+ + + L+ L L +D GI L+ + +
Sbjct: 288 IAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSA 347
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTK 226
G L + L L+ Q LT L + +RG L++ LSF ++ G+
Sbjct: 348 A--EGCLGLEQLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLH 398
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD- 285
L ++ SL LNL +C D+I + + + L+G +SF D
Sbjct: 399 LSHMGSLRSLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDK 441
Query: 286 VSNSSLSRFCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGV 343
V + SL+ ++ Q + L+ L L S I DD + + LR LN+ R + G+
Sbjct: 442 VGDQSLA---YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGL 498
Query: 344 GILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
++A HL L + L G T+I + ++ +P LK +++
Sbjct: 499 ELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 539
>gi|87309591|ref|ZP_01091725.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
gi|87287355|gb|EAQ79255.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
Length = 328
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 43/225 (19%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--------- 347
L +++L+ L+L+ S + D S+E++ + LR+L L T +SAGV LA
Sbjct: 88 LVMLQSLQRLNLNQSGVTDKSLEIMGAL-PELRSLYLERTAVTSAGVAALASCEKLEELM 146
Query: 348 --------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQ 392
G LP L +LSLS T I D + ++ +P LK + + +T + G
Sbjct: 147 LTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDTAVTGEGFA 206
Query: 393 QVGAETDLVL-----------SLTALQNLNHLERLNLEQTQVSDATLFP-----LSTFK- 435
+ + TDL L ++ L++ +LERL L +T ++D L P L F
Sbjct: 207 MLKSSTDLRLIDLSDNSINRSTIETLRSFPNLERLYLGRTSLTDE-LLPEFIDTLIRFNP 265
Query: 436 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
L L++ +TD SL L L++L +L++ D T G+F+
Sbjct: 266 HLRGLAIMEVPITDNSLTPLKRLAELPDLAVVDFRETGVTRGAFQ 310
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 56/207 (27%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV-------- 126
++ V + + +GA LRSL + + VTS+ + AL L+EL L+ C
Sbjct: 101 QSGVTDKSLEIMGALPELRSLYL-ERTAVTSAGVAALASCEKLEELMLTECAIQDDALET 159
Query: 127 ---------------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+TDAGM HL S+ L+ L+L +T +T +G A+L S +L ++DL
Sbjct: 160 IGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDTAVTGEGFAMLKSSTDLRLIDL 219
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-----------------RGAAVLKM---- 210
+ + +L+ LE L L + +++ RG A++++
Sbjct: 220 SDNSINRSTIETLRSFPNLERLYLGRTSLTDELLPEFIDTLIRFNPHLRGLAIMEVPITD 279
Query: 211 -----------FPRLSFLNLAWTGVTK 226
P L+ ++ TGVT+
Sbjct: 280 NSLTPLKRLAELPDLAVVDFRETGVTR 306
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
GA LR A+ R+T +A L + L+ L+L++ VTD ++ + ++ L L+
Sbjct: 68 GAVVELR----ANSARMTDNAASHLVMLQSLQRLNLNQS-GVTDKSLEIMGALPELRSLY 122
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L T +T+ G+A L+S + L L L + D L ++ L L L L + +++ G
Sbjct: 123 LERTAVTSAGVAALASCEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMF 182
Query: 207 VLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTID-SILEGNENKAPLAKIS 260
L+ P L L L T VT L + + L ++LS+ +I+ S +E + L ++
Sbjct: 183 HLQSLPHLKTLYLRDTAVTGEGFAMLKSSTDLRLIDLSDNSINRSTIETLRSFPNLERLY 242
Query: 261 LAGTTFINE 269
L T+ +E
Sbjct: 243 LGRTSLTDE 251
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L +L+ L+L+ + + D ++ M +P L+ + + T + + AL +
Sbjct: 91 LQSLQRLNLNQSGVTDKSLEIMGALPELRSLYLERTAVTS------------AGVAALAS 138
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
LE L L + + D L + L LSL +TD + L SL L L +RD
Sbjct: 139 CEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDT 198
Query: 470 VLTNSGLGSFKPPRSLKLLDL 490
+T G K L+L+DL
Sbjct: 199 AVTGEGFAMLKSSTDLRLIDL 219
>gi|66802316|ref|XP_629940.1| hypothetical protein DDB_G0291806 [Dictyostelium discoideum AX4]
gi|60463333|gb|EAL61524.1| hypothetical protein DDB_G0291806 [Dictyostelium discoideum AX4]
Length = 956
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L N ++ + + YL L L++++C R+T+ +L + MT L++LD+S + +
Sbjct: 152 LNLSNSNKLEDKGIKYLKGLPKLTELDISNCCRITNRSLKYIGFMTRLEQLDISNNLNLN 211
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN-LSVLDLGGLPVTDLVLRSLQVLT 188
D K+L+ +S L++L T I + QN L+ + GG S+Q
Sbjct: 212 DQAFKYLMVLSRLKELVARNVPFTDHSIC--TQFQNQLNNYNHGG-------SISIQPFQ 262
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
L ++L S +SN+ + FP LS + L+ T T++
Sbjct: 263 SLSIINLSNSFISNQSLPIFLQFPSLSTIYLSNTKCTQI 301
>gi|301126468|ref|XP_002909849.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101999|gb|EEY60051.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 427
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 27/262 (10%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVK 127
+ LRG + V + L + L++LN+ C + +T + AL +T L L+LS C +
Sbjct: 169 LNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDGGISALAEVTSLTSLNLSNCSQ 228
Query: 128 VTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQ 185
+TD G+ L ++ L L ++ G +T G L+ L NL LD+ G +TD L
Sbjct: 229 LTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLV 288
Query: 186 VLTKLEYLDLW-GSQVSNRGAAVLKMFPRLSFLNLAWTG---------VTKLPNISSLE- 234
KL +LW S++ + ++ ++ FLN G + KL N++SL+
Sbjct: 289 NFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCGKVTDRGLRSIAKLRNLTSLDM 348
Query: 235 --CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
C N+++ ++ + + N L + L G + I + S L LD+SN
Sbjct: 349 VSCFNVTDEGLNELSKLNR----LKSLYLGGCSGIRDEGIAALSHLSSLVILDLSN---- 400
Query: 293 RFCFLTQMKALEHLDLSSSMIG 314
C KAL +D + + G
Sbjct: 401 --CRQVGNKALLGIDDGTGVSG 420
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQ--NLSVLDLGG 173
LKE++L+ C +TD ++ L ++S L + L +T I LL+ Q +L+ ++LG
Sbjct: 88 LKEVNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLGY 147
Query: 174 LP-VTDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 222
V+D + ++ L+KL YL+L G SQV + G L L LNL +
Sbjct: 148 CKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDG 207
Query: 223 GVTKLPNISSLECLNLSNCT 242
G++ L ++SL LNLSNC+
Sbjct: 208 GISALAEVTSLTSLNLSNCS 227
>gi|343418611|emb|CCD19670.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 840
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 191/449 (42%), Gaps = 62/449 (13%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L L++ DC + L L G+T L+EL L + + V DA ++ L L +L
Sbjct: 282 LARMRSLEMLDLNDCTGIVR-GLHELCGLTTLQELYLWQ-LCVDDAFLRDLTCHERLRRL 339
Query: 146 WLSETGLTAD--GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL---TKLEYLDLWGSQV 200
L+ D +A + SL+NL + D G ++R L VL T L+ L LW V
Sbjct: 340 SLNSCTRITDVSPLARMRSLENLDLNDCTG------IVRGLHVLCGLTTLQELCLWQLCV 393
Query: 201 SNRGAAVLKMFPRLSFLNL----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPL 256
+ L RL L+L T V+ L + SLE LNL+ CT I+ G L
Sbjct: 394 DDAFVRDLTCHERLRRLSLNSCTRITNVSPLARMRSLEILNLNGCT--GIVRGLHVLCGL 451
Query: 257 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMI 313
+ + +AFL T +S +S +R L +M++LE LDL+
Sbjct: 452 TTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNGC-T 510
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMS 372
G V C L+ L L+ + A + L H L LSL S T+I D +S ++
Sbjct: 511 GIVRGLHVLCGLTTLQELCLAEVPVNDALLRDLTCH-ERLRELSLNSCTRITD--VSPLA 567
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
M SL+ +D++ D G ++ L L L L+ L L Q V +A L L+
Sbjct: 568 RMRSLEMLDLN--DCTGIVR----------GLHELCGLTTLQELCLWQLCVDNAFLRDLT 615
Query: 433 TFKELIHLSLRNAS-LTDVS----------------------LHQLSSLSKLTNLSIRDA 469
+ L LSL + + +TDVS LH+L L+ L L +
Sbjct: 616 CHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNGCIGIVRGLHELCGLTTLQELYLWQL 675
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
+ N+ L L+ L L+ +T+
Sbjct: 676 CVDNAFLRDLTCHERLRRLSLNSCTRITD 704
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 203/494 (41%), Gaps = 79/494 (15%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L LN+ DC + L L G+T L+EL L + V V DA ++ L L +L
Sbjct: 140 LARMRSLEMLNLNDCTGIVR-GLHELCGLTTLQELYLPK-VYVDDAFLRDLTCHERLRRL 197
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
L+ D ++ L+ +++L +LDL G L L LT L+ L LW V N
Sbjct: 198 SLNSCTRITD-VSPLARMRSLEMLDLNGCIGIVRGLHELCGLTTLQELYLWQLCVDNAFL 256
Query: 206 AVLKMFPRLSFLNL----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL 261
L RL L+L T V+ L + SLE L+L++CT I+ G L +
Sbjct: 257 RDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNDCT--GIVRGLHELCGLTTLQE 314
Query: 262 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF---LTQMKALEHLDLSSS------- 311
+ +AFL T +S +S +R L +M++LE+LDL+
Sbjct: 315 LYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLENLDLNDCTGIVRGL 374
Query: 312 -----------------MIGDDSVEMVACVGANLRNLNL-SNTRFSSA------------ 341
+ D V + C LR L+L S TR ++
Sbjct: 375 HVLCGLTTLQELCLWQLCVDDAFVRDLTC-HERLRRLSLNSCTRITNVSPLARMRSLEIL 433
Query: 342 ----------GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDI 387
G+ +L G L L+ L L +DD + ++ L+ + +++ TD+
Sbjct: 434 NLNGCTGIVRGLHVLCG-LTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDV 492
Query: 388 KGFIQQVGAE-------TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
+ E T +V L L L L+ L L + V+DA L L+ + L L
Sbjct: 493 SPLARMRSLEMLDLNGCTGIVRGLHVLCGLTTLQELCLAEVPVNDALLRDLTCHERLREL 552
Query: 441 SLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW-LLTE 498
SL + + +TDVS L+ + L L + D GL +L+ L L W L +
Sbjct: 553 SLNSCTRITDVS--PLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQELCL---WQLCVD 607
Query: 499 DAILQFCKMHPRIE 512
+A L+ H R+
Sbjct: 608 NAFLRDLTCHERLR 621
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 176/411 (42%), Gaps = 54/411 (13%)
Query: 111 LTGMTC---LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L +TC L+EL L+ C ++TD + L + +LE L L++ G+ +L L L
Sbjct: 43 LRDLTCHERLRELSLNSCTRITD--VSPLARMRSLEILNLNDCTGIVRGLHVLCGLTTLQ 100
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
L L + V D +R L +L L L N + T V+ L
Sbjct: 101 ELCLANVNVDDAFVRDLTCHERLRRLSL------NSCTRI--------------TDVSPL 140
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+ SLE LNL++CT I+ G L + + +AFL T +S
Sbjct: 141 ARMRSLEMLNLNDCT--GIVRGLHELCGLTTLQELYLPKVYVDDAFLRDLTCHERLRRLS 198
Query: 288 NSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
+S +R L +M++LE LDL+ IG C L+ L L +A +
Sbjct: 199 LNSCTRITDVSPLARMRSLEMLDLNGC-IGIVRGLHELCGLTTLQELYLWQLCVDNAFLR 257
Query: 345 ILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
L H L LSL S T+I D +S ++ M SL+ +D++ D G ++
Sbjct: 258 DLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEMLDLN--DCTGIVR----------G 302
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLT 462
L L L L+ L L Q V DA L L+ + L LSL + + +TDVS L+ + L
Sbjct: 303 LHELCGLTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVS--PLARMRSLE 360
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW-LLTEDAILQFCKMHPRIE 512
NL + D GL +L+ L L W L +DA ++ H R+
Sbjct: 361 NLDLNDCTGIVRGLHVLCGLTTLQELCL---WQLCVDDAFVRDLTCHERLR 408
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 202/460 (43%), Gaps = 73/460 (15%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R L +L++ DC + L L G+T L+EL L + + V DA ++ L L +L
Sbjct: 353 LARMRSLENLDLNDCTGIVR-GLHVLCGLTTLQELCLWQ-LCVDDAFVRDLTCHERLRRL 410
Query: 146 WL-SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL---TKLEYLDLWGSQVS 201
L S T +T ++ L+ +++L +L+L G ++R L VL T L+ L LW V
Sbjct: 411 SLNSCTRIT--NVSPLARMRSLEILNLNGCTG---IVRGLHVLCGLTTLQELYLWQLCVD 465
Query: 202 NRGAAVLKMFPRLSFLNL----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ L RL L+L T V+ L + SLE L+L+ CT I+ G L
Sbjct: 466 DAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNGCT--GIVRGLHVLCGLT 523
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIG 314
+ + +A L T ++S +S +R L +M++LE LDL
Sbjct: 524 TLQELCLAEVPVNDALLRDLTCHERLRELSLNSCTRITDVSPLARMRSLEMLDL------ 577
Query: 315 DDSVEMVA-----CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYAI 368
+D +V C L+ L L +A + L H L LSL S T+I D +
Sbjct: 578 NDCTGIVRGLHELCGLTTLQELCLWQLCVDNAFLRDLTCH-ERLRRLSLNSCTRITD--V 634
Query: 369 SYMSMMPSLKFIDISNTD--IKGFIQQVGAET-------DLVLSLTALQNLN---HLERL 416
S ++ M SL+ +D++ ++G + G T L + L++L L RL
Sbjct: 635 SPLARMRSLEMLDLNGCIGIVRGLHELCGLTTLQELYLWQLCVDNAFLRDLTCHERLRRL 694
Query: 417 NLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT-----NLSIRDAV 470
+L T+++D + PL+ + L L L + + LH+L L+ L L + DA
Sbjct: 695 SLNSCTRITDVS--PLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQELYLWQLCVDDAF 752
Query: 471 LTN------------------SGLGSFKPPRSLKLLDLHG 492
L + + + RSL++LDL+G
Sbjct: 753 LRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNG 792
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 159/370 (42%), Gaps = 50/370 (13%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVL---TKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ SL+ L + D G ++R L VL T L+ L LW V + L RL
Sbjct: 1 MRSLEMLDLNDCTG------IVRGLHVLCGLTTLQELCLWQLCVDDALLRDLTCHERLRE 54
Query: 217 LNL----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 272
L+L T V+ L + SLE LNL++CT I+ G L + +N +A
Sbjct: 55 LSLNSCTRITDVSPLARMRSLEILNLNDCT--GIVRGLHVLCGLTTLQELCLANVNVDDA 112
Query: 273 FLYIETSLLSFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVA-----CV 324
F+ T +S +S +R L +M++LE L+L +D +V C
Sbjct: 113 FVRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLNL------NDCTGIVRGLHELCG 166
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDIS 383
L+ L L A + L H L LSL S T+I D +S ++ M SL+ +D++
Sbjct: 167 LTTLQELYLPKVYVDDAFLRDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEMLDLN 223
Query: 384 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
+G +V L L L L+ L L Q V +A L L+ + L LSL
Sbjct: 224 GC--------IG----IVRGLHELCGLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLN 271
Query: 444 NAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
+ + +TDVS L+ + L L + D GL +L+ +L+ L +DA L
Sbjct: 272 SCTRITDVS--PLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQ--ELYLWQLCVDDAFL 327
Query: 503 QFCKMHPRIE 512
+ H R+
Sbjct: 328 RDLTCHERLR 337
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 159/396 (40%), Gaps = 60/396 (15%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTS----------------------SALWALTGM 114
VD ++ L LR L++ C R+T L L G+
Sbjct: 463 CVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNGCTGIVRGLHVLCGL 522
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
T L+EL L+ V V DA ++ L L +L L+ D ++ L+ +++L +LDL
Sbjct: 523 TTLQELCLAE-VPVNDALLRDLTCHERLRELSLNSCTRITD-VSPLARMRSLEMLDLNDC 580
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPNI 230
L L LT L+ L LW V N L RL L+L T V+ L +
Sbjct: 581 TGIVRGLHELCGLTTLQELCLWQLCVDNAFLRDLTCHERLRRLSLNSCTRITDVSPLARM 640
Query: 231 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
SLE L+L+ C I+ G L + + AFL T +S +S
Sbjct: 641 RSLEMLDLNGCI--GIVRGLHELCGLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLNS 698
Query: 291 LSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVA-----CVGANLRNLNLSNTRFSSAG 342
+R L +M++LE LDL +D +V C L+ L L A
Sbjct: 699 CTRITDVSPLARMRSLEMLDL------NDCTGIVRGLHELCGLTTLQELYLWQLCVDDAF 752
Query: 343 VGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
+ L H L LSL S T+I D +S ++ M SL+ +D++ +G +V
Sbjct: 753 LRDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEMLDLNGC--------IG----IV 797
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 437
L L L L+ L L V DA + L+ + L
Sbjct: 798 RGLHVLCGLTTLQELCLANVNVDDAFVRGLACHERL 833
>gi|300691654|ref|YP_003752649.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078714|emb|CBJ51373.1| leucine-rich-repeat type III effector protein (GALA7) [Ralstonia
solanacearum PSI07]
Length = 612
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 35/289 (12%)
Query: 117 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS---SLQNLSVLDL 171
L+ LDL C + A +++L + LE L + + G LL+ SL+ L+V D
Sbjct: 170 LRHLDLGECTGEAKSPAAIEYLAKL-PLESLNVKGAQIGDRGAQLLAANLSLKKLNVADG 228
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
G ++++ R L LE LD+ G+++ RGA L + L L GVT P I
Sbjct: 229 G---ISEVGARKLAAHPSLESLDMSGNRIDARGAEHLATSQSIETLRLCCCGVTD-PGIQ 284
Query: 232 S------LECLNLSNCTIDSILEGNEN--KAPLAKISLAGTTFINEREAFLYIETSLLSF 283
+ L+ L++S I NE+ +A A SL R+ +++
Sbjct: 285 ALASNRRLKSLDVSGNNI------NEDALRALAANPSLTSLDVGYNRQNARGGPQTVVQG 338
Query: 284 LDVSNSSLSRFCFLTQMKA----LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
+D++ F ++A LE L + + + D +VEM+A + +L+L N
Sbjct: 339 VDMA------FALAMGLRARGKPLESLKVDGNALNDRAVEMLALPMIEIASLSLKNNLIG 392
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 388
G LAG+ P LE L L+ +IDD +S SLK + + N +K
Sbjct: 393 PDGARHLAGN-PVLESLDLTRNKIDDEGAEALSRSRSLKTLSVLNCGVK 440
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E++ ++G D L A L+ LNVAD ++ L L+ LD+S +
Sbjct: 197 ESLNVKGAQIGD-RGAQLLAANLSLKKLNVADGG-ISEVGARKLAAHPSLESLDMS-GNR 253
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ G +HL + ++E L L G+T GI L+S + L LD+ G + + LR+L
Sbjct: 254 IDARGAEHLATSQSIETLRLCCCGVTDPGIQALASNRRLKSLDVSGNNINEDALRALAAN 313
Query: 188 TKLEYLDLWGSQVSNRGA 205
L LD+ ++ + RG
Sbjct: 314 PSLTSLDVGYNRQNARGG 331
>gi|320169501|gb|EFW46400.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1286
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 174/405 (42%), Gaps = 36/405 (8%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
A TG+T + L L+ ++TD +S L +L+L+ L++ + L L L
Sbjct: 104 AFTGLTAVISLQLNNN-RLTDISANAFTGLSALSQLFLNNNRLSSVPAGAFAGLPALKQL 162
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP- 228
L +T + LT L +L L +Q+++ A+V LS L L +T +P
Sbjct: 163 QLNSNRITSISATLFTGLTALTWLRLEFNQITSIPASVFTDLTGLSVLVLRSNNITSIPP 222
Query: 229 -NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT-------FINEREAF---LYIE 277
+ L L+ + +I+ I + + AG T +IN+ + +
Sbjct: 223 YAFTGLTALSQIDVSINLITS-------IPAFAFAGLTAATYLDLYINQITSISDSAFTG 275
Query: 278 TSLLSFLDVSNSSLSRFCFLT--QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
+ L+FL++ N+ L+ T + AL++L L S+ + + A + A L +L L +
Sbjct: 276 LTALTFLNMDNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAPNTFAGLTA-LNSLQLYD 334
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
+ +S L L LSL+ I S + + SL+++ + N I
Sbjct: 335 NQITSIPANAF-DDLSVLNTLSLNDNLITSVPASAFANLTSLQYLSLFNNRITS------ 387
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
++ A +L L L+L ++++ ++ L L L N S+T +S
Sbjct: 388 ------IAANAFDDLTALGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITSISAGTF 441
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
SSLS +T + + D +++ +F SLKLL L G + + A
Sbjct: 442 SSLSAVTYMYMYDNQISSIPANTFTGMTSLKLLYLSGNQITSVSA 486
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 163/409 (39%), Gaps = 68/409 (16%)
Query: 101 RRVTSSALWALTGMTCLKELDLS-RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
+TS +A TG+T L ++D+S + A L+ +T L++++ +T+ +
Sbjct: 215 NNITSIPPYAFTGLTALSQIDVSINLITSIPAFAFAGLTAATYLDLYINQ--ITSISDSA 272
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
+ L L+ L++ +T ++ + LT L+YL LW +QV++ L+ L L
Sbjct: 273 FTGLTALTFLNMDNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAPNTFAGLTALNSLQL 332
Query: 220 AWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+T +P ++S L L+L++ I S+ A
Sbjct: 333 YDNQITSIPANAFDDLSVLNTLSLNDNLITSV------------------------PASA 368
Query: 275 YIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 332
+ + L +L + N+ ++ + AL L L ++ I + A + A L L+
Sbjct: 369 FANLTSLQYLSLFNNRITSIAANAFDDLTALGSLHLHTNRITNIPSTAFASLSA-LTQLH 427
Query: 333 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
L N +S G + L + + + QI + + M SLK + +S I
Sbjct: 428 LYNNSITSISAGTFSS-LSAVTYMYMYDNQISSIPANTFTGMTSLKLLYLSGNQI----- 481
Query: 393 QVGAETDLVLSLTALQNLN-HLERLNLEQTQVSDATL------------------FPLST 433
+ LTAL L+ +L R+ T +S A P S
Sbjct: 482 -TSVSANAFSGLTALTQLSLYLNRI----TSISAAAFPGLTALLTLSLSDNQISSIPSSA 536
Query: 434 FKELI---HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
F +L L L N +T ++ + L L+ L + + +T++ +F
Sbjct: 537 FTDLTLLKFLYLYNNQITSIAANAFVGLPALSTLLLHNNTITSTFATAF 585
>gi|440717669|ref|ZP_20898151.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
gi|436437289|gb|ELP30945.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
Length = 442
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 146/323 (45%), Gaps = 42/323 (13%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ + + L + LK L L+ +TD +K + +++L+ L+L TG+T +G+ LL+
Sbjct: 107 IDDAGMENLKSLANLKRLTLADTA-ITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTG 165
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L L +DL + D + SL + L + L S+V++ G L P L +N +
Sbjct: 166 LSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPLP-LKSINFNYC 224
Query: 223 GVTKLPNIS------SLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLY 275
P + +LE L I D+ + + + L ++ + G E +
Sbjct: 225 TTINGPTMKMLGQTPTLENLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIA 284
Query: 276 IETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-------- 325
+L F ++ +SS+ ++Q+ A+ H+D+S + S E +A +G
Sbjct: 285 GNKALARF-ELRDSSVDDDGLKVISQLPAVTHVDISECRLA--SPEGIAQLGKLIGLTYL 341
Query: 326 ------------------ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
NL LNL +T + + +L + L+ L+++GTQ+ D +
Sbjct: 342 GLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLM-KMTKLKTLNVAGTQLGDDS 400
Query: 368 ISYMSMMPSLKFIDISNTDIKGF 390
++ +P+LK ++++NT I GF
Sbjct: 401 FLELAKLPNLKSMNVANTSI-GF 422
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 56/352 (15%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ DAGM++L S++ L++L L++T +T + + + +L L L VTD L L L
Sbjct: 107 IDDAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGL 166
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 247
+KL +DL + + + G L L + L + VT
Sbjct: 167 SKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTD--------------------- 205
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
EG APL S+ F Y T ++ ++ L Q LE+L
Sbjct: 206 EGLVKLAPLPLKSIN----------FNYCTT-------INGPTMK---MLGQTPTLENLQ 245
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
S I D S+ + + + L+ L + + G+ +AG+ L L + +DD
Sbjct: 246 GDYSKINDASMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDDDG 303
Query: 368 ISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNHLE 414
+ +S +P++ +DIS + I Q+G L +L +L +LE
Sbjct: 304 LKVISQLPAVTHVDISECRLASPEGIAQLGKLIGLTYLGLWETKTNDETLAGFGDLVNLE 363
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
LNL+ T V+D +L L +L L++ L D S +L+ L L ++++
Sbjct: 364 ELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 415
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E + ++ + L + D V L ++ + + +D+S C + G+ L
Sbjct: 275 VTGEGIQHIAGNKALARFELRDSS-VDDDGLKVISQLPAVTHVDISECRLASPEGIAQLG 333
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L L L ET + +A L NL L+L VTD L L +TKL+ L++ G
Sbjct: 334 KLIGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDESLPVLMKMTKLKTLNVAG 393
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
+Q+ + SFL LA KLPN+ S+ N S
Sbjct: 394 TQLGDD-----------SFLELA-----KLPNLKSMNVANTS 419
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L++L +L+RL L T ++D TL + L L LR +TD L L+ LSKL + +
Sbjct: 115 LKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDL 174
Query: 467 RDAVLTNSGLGSFKPPRSL 485
R+ + ++G+ S ++L
Sbjct: 175 RNTNIGDAGMDSLAKIKTL 193
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
+PN + +G IDD + + + +LK + +++T I TD +L +
Sbjct: 94 IPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAI----------TDQ--TLKTVGE 141
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
+ L+ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 142 MTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKS 201
Query: 470 VLTNSGLGSFKP 481
+T+ GL P
Sbjct: 202 KVTDEGLVKLAP 213
>gi|242072029|ref|XP_002451291.1| hypothetical protein SORBIDRAFT_05g027070 [Sorghum bicolor]
gi|241937134|gb|EES10279.1| hypothetical protein SORBIDRAFT_05g027070 [Sorghum bicolor]
Length = 816
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 186/450 (41%), Gaps = 79/450 (17%)
Query: 73 RGENSVDAEWMAYLGAFRYLRSLNVADCRRVTS--SALWALTGMTCLKELDLSRCVKVTD 130
R +N V E++ L +YL N+ + R+++ ++ L+G CL+ L LS C +++
Sbjct: 101 RMQNDVLPEYINGLAKLQYL---NLKESSRISALPESIGKLSG--CLEFLGLSGCSGISE 155
Query: 131 --AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
A L + L+ S D + L++LQ L +L G + SL LT
Sbjct: 156 LPASFGDLKCMMYLDMSGCSAIKELPDSVGHLTNLQRL---ELSGCNSLKAIPESLCGLT 212
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-------------------N 229
+L+YL L R + L +LNL+ GVT+LP
Sbjct: 213 QLQYLSLEFCTYIVRLPEAIGCLVDLQYLNLSHCGVTELPLHLELALCSIKKELPRALRG 272
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
++ LE L++S + ++ G K L + T+ LY+ L DV +
Sbjct: 273 LTRLEYLDMS---WNGLVVGKMEKDDLLDAMKSLTSL-----KVLYLSGCLKRCFDVKKN 324
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA--GVGILA 347
+ F+ + LEHLDLSS + +E + NL+ L+ N R S + +
Sbjct: 325 D-AYLDFIGTLTNLEHLDLSS----NGELEYLPESIGNLKRLHTLNLRNCSGLMSLPVSI 379
Query: 348 GHLPNLEILSLSGT--QIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAETDL-VL 402
L+ L L G ++ D A S + +L + DI G+ + Q+ E+D+ L
Sbjct: 380 SGATGLKSLVLDGCSHEVMDQATSLLHYSLTLPLFKVRADDISGYSNLHQLQGESDIGGL 439
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
++ +L+N+ LE +A LS + L+ L+L S +K
Sbjct: 440 NIVSLENVRFLE----------EAQRLKLSAKQNLVKLTL--------------SWTKDA 475
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+ I D L LG PP SLK L G
Sbjct: 476 HRLIEDKDL----LGELVPPMSLKSFRLEG 501
>gi|406830019|ref|ZP_11089613.1| hypothetical protein SpalD1_00225 [Schlesneria paludicola DSM
18645]
Length = 509
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 150/372 (40%), Gaps = 58/372 (15%)
Query: 135 HLL-SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
HLL S + L L L+ T +T + L L++LS+LDLGG ++D + L L L+ L
Sbjct: 112 HLLKSFNALGTLNLNGTDITDADFSELRDLRHLSLLDLGGTRISDASIEGLSQLKNLKEL 171
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+ G+++++ G LK LPN I +E++
Sbjct: 172 WIDGTEITDAGVQSLK---------------EALPN------------AIVGKDAPDESQ 204
Query: 254 APLAKISLAGTTFINEREAFL-YIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSS 310
A SL G +E A IE FLDV + + Q ++L L L S
Sbjct: 205 AIETIRSLGGGVTRDEAVAGRPVIEVGFGGFLDVGPKTTIEEVLSAVKQFRSLRTLQLGS 264
Query: 311 SMIGDDSVEMVACVGA--------NLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLSG 360
S GD S ++A NL L + + AG+ ++ L +L +++L
Sbjct: 265 S--GDASHGLLATADGWKEISELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKI 322
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
T I + + +L D+ TD L L+ L L+ L+L
Sbjct: 323 TNQGMKEIGKLKNLTNLGLFDVQLTDA---------------GLNQLRGLQRLDTLSLNN 367
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
+SD L + L LS+ + +TD L L LS L NL + +++ GL
Sbjct: 368 NPISDEGLRQVGALTSLTFLSVPSTEITDNGLKGLRGLSSLKNLCLASTRISDDGLKGLI 427
Query: 481 PPRSLKLLDLHG 492
+L+ LDL G
Sbjct: 428 GLNNLEQLDLAG 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELD-LSR----CVKV 128
G + E ++ + FR LR+L + + L G + EL+ L+R +++
Sbjct: 239 GPKTTIEEVLSAVKQFRSLRTLQLGSSGDASHGLLATADGWKEISELNNLTRLTIIGIEI 298
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
TDAG+K + +S LE L L +T G+ + L+NL+ L L + +TD L L+ L
Sbjct: 299 TDAGLKEISRLSQLESLRLINLKITNQGMKEIGKLKNLTNLGLFDVQLTDAGLNQLRGLQ 358
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
+L+ L L + +S+ G + L+FL++ T G+ L +SSL+ L L++ I
Sbjct: 359 RLDTLSLNNNPISDEGLRQVGALTSLTFLSVPSTEITDNGLKGLRGLSSLKNLCLASTRI 418
Query: 244 -DSILEGNENKAPLAKISLAGT 264
D L+G L ++ LAGT
Sbjct: 419 SDDGLKGLIGLNNLEQLDLAGT 440
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 53/240 (22%)
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA---AVLK 209
TADG +S L NL+ L + G+ +TD L+ + L++LE L L +++N+G LK
Sbjct: 275 TADGWKEISELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKITNQGMKEIGKLK 334
Query: 210 MFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
L ++ T G+ +L + L+ L+L+N I
Sbjct: 335 NLTNLGLFDVQLTDAGLNQLRGLQRLDTLSLNNNPI------------------------ 370
Query: 268 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 327
S+ L + LT +L L + S+ I D+ ++ + + ++
Sbjct: 371 -------------------SDEGLRQVGALT---SLTFLSVPSTEITDNGLKGLRGL-SS 407
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L+NL L++TR S G+ L G L NLE L L+GT++ + + + SL + +SNT I
Sbjct: 408 LKNLCLASTRISDDGLKGLIG-LNNLEQLDLAGTRVTGTGVGPLRELESLHSLGLSNTQI 466
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 177/400 (44%), Gaps = 53/400 (13%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
LR +++ L +F L +LN+ + +T + L + L LDL +++DA
Sbjct: 100 LRQNKYFSGKYLHLLKSFNALGTLNL-NGTDITDADFSELRDLRHLSLLDLG-GTRISDA 157
Query: 132 GMKHLLSISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
++ L + L++LW+ T +T G+ +L +L N V P + +++ L
Sbjct: 158 SIEGLSQLKNLKELWIDGTEITDAGVQSLKEALPNAIVGK--DAPDESQAIETIRSLGGG 215
Query: 191 EYLD--LWGSQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 247
D + G V G L + P+ + + ++ + SL L L +
Sbjct: 216 VTRDEAVAGRPVIEVGFGGFLDVGPKTTIEEV----LSAVKQFRSLRTLQLGSS------ 265
Query: 248 EGNENKAPLAKISLAGTTFINE-----REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
G+ + LA + G I+E R + IE ++++ L L+Q+++
Sbjct: 266 -GDASHGLLA--TADGWKEISELNNLTRLTIIGIE--------ITDAGLKEISRLSQLES 314
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
L ++L + G + + NL NL L + + + AG+ L G L L+ LSL+
Sbjct: 315 LRLINLKITNQGMKEIGKL----KNLTNLGLFDVQLTDAGLNQLRG-LQRLDTLSLNNNP 369
Query: 363 IDDYAISYMSMMPSLKFIDISNTDI-----KGFIQQVGAETDLVLS--------LTALQN 409
I D + + + SL F+ + +T+I KG ++ + + +L L+ L L
Sbjct: 370 ISDEGLRQVGALTSLTFLSVPSTEITDNGLKG-LRGLSSLKNLCLASTRISDDGLKGLIG 428
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
LN+LE+L+L T+V+ + PL + L L L N ++D
Sbjct: 429 LNNLEQLDLAGTRVTGTGVGPLRELESLHSLGLSNTQISD 468
>gi|405751552|ref|YP_006675017.1| internalin I [Listeria monocytogenes SLCC2378]
gi|404220752|emb|CBY72115.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2378]
Length = 1775
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 186/415 (44%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A N + + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 522 KEFYAQNN--NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 580 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 637
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 638 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 687
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 688 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 310 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 366
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ M P+L L L G+T
Sbjct: 367 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITS 423
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 424 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 457
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 458 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG- 513
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ + D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 514 --KMTELPSLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 569
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 570 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 624
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 625 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|46906570|ref|YP_012959.1| cell wall surface anchor family protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47091468|ref|ZP_00229265.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 4b H7858]
gi|81830300|sp|Q723X5.1|INLI_LISMF RecName: Full=Internalin-I; Flags: Precursor
gi|46879835|gb|AAT03136.1| cell wall surface anchor family protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47020145|gb|EAL10881.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 4b H7858]
Length = 1775
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 186/415 (44%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A N + + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 522 KEFYAQNN--NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 580 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 637
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 638 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 687
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 688 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 310 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 366
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ M P+L L L G+T
Sbjct: 367 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITS 423
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 424 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 457
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 458 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG- 513
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ + D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 514 --KMTELPSLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 569
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 570 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 624
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 625 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|405754422|ref|YP_006677886.1| internalin I [Listeria monocytogenes SLCC2540]
gi|404223622|emb|CBY74984.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2540]
Length = 1775
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 522 KEFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 580 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 637
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 638 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 687
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 688 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 169/401 (42%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 310 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 366
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ M P+L L L G+T
Sbjct: 367 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITS 423
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 424 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 457
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D V + + L +N+SN + G
Sbjct: 458 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSD--VSTLTNFPS-LNYINVSNNVIRTVG- 513
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 514 --KMTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 569
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 570 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 624
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 625 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|254825619|ref|ZP_05230620.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-194]
gi|293594862|gb|EFG02623.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-194]
Length = 1775
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 522 KEFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 580 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 637
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 638 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 687
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 688 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 310 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 366
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ M P+L L L G+T
Sbjct: 367 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITS 423
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 424 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 457
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 458 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG- 513
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 514 --KMTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 569
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 570 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 624
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 625 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|254992878|ref|ZP_05275068.1| internalin proteins, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes FSL J2-064]
Length = 1775
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 522 KEFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 580 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 637
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 638 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 687
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 688 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 310 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 366
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ M P+L L L G+T
Sbjct: 367 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITS 423
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 424 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 457
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 458 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG- 513
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 514 --KMTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 569
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 570 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 624
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 625 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|226222958|ref|YP_002757065.1| internalin proteins, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731097|ref|YP_006204593.1| internalin protein, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes 07PF0776]
gi|406703104|ref|YP_006753458.1| internalin I (LPXTG motif) [Listeria monocytogenes L312]
gi|225875420|emb|CAS04117.1| Putative internalin proteins, putative peptidoglycan bound protein
(LPXTG motif) [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|384389855|gb|AFH78925.1| internalin protein, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes 07PF0776]
gi|406360134|emb|CBY66407.1| internalin I (LPXTG motif) [Listeria monocytogenes L312]
Length = 1775
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 522 KEFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 580 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 637
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 638 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 687
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 688 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 310 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 366
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ M P+L L L G+T
Sbjct: 367 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITS 423
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 424 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 457
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 458 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG- 513
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 514 --KMTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 569
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 570 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 624
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 625 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|254854582|ref|ZP_05243930.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
R2-503]
gi|300766483|ref|ZP_07076434.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N1-017]
gi|404279887|ref|YP_006680785.1| internalin I [Listeria monocytogenes SLCC2755]
gi|404285703|ref|YP_006692289.1| internalin I [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|258607981|gb|EEW20589.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
R2-503]
gi|300512809|gb|EFK39905.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N1-017]
gi|404226522|emb|CBY47927.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244632|emb|CBY02857.1| internalin I (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 1775
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 522 KEFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 580 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 637
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 638 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 687
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 688 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 310 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 366
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ M P+L L L G+T
Sbjct: 367 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITS 423
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 424 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 457
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 458 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG- 513
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 514 --KMTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 569
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 570 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 624
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 625 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|424713203|ref|YP_007013918.1| Internalin-I [Listeria monocytogenes serotype 4b str. LL195]
gi|424012387|emb|CCO62927.1| Internalin-I [Listeria monocytogenes serotype 4b str. LL195]
Length = 1631
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 186/415 (44%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 233 EDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGC-GITSIGT--LDNLP 287
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 288 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 321
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 322 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 377
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A N + + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 378 KEFYAQNN--NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 435
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 436 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 493
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 494 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 543
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 544 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 596
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 166 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 222
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ M P+L L L G+T
Sbjct: 223 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITS 279
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 280 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 313
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D S +L +N+SN + G
Sbjct: 314 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG- 369
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ + D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 370 --KMTELPSLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 425
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 426 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 480
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 481 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 521
>gi|342181851|emb|CCC91330.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 421
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 26/184 (14%)
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT----DIKGFIQ-QVGAETDL-- 400
GHLP + L+LSGT + D + +S+ SL+ ID+ D++ Q Q E D+
Sbjct: 33 GHLPRIHTLALSGTGVIDECLCGLSLSKSLRRIDLCGCLRIKDVEPLSQIQTLEEVDVSG 92
Query: 401 ----VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQL 455
V + AL L HL L T + D L LS + L+ L L N LT+V L
Sbjct: 93 CFPCVCGIGALGKLPHLRYLKATLTGIRDECLVRLSVSRCLVKLLLSNCERLTNV--QCL 150
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW------------LLTEDAILQ 503
+ ++ L L + D V G+G SLK LD+ G L E IL+
Sbjct: 151 ARITSLEELDLSDCVNVTEGIGDLGRLPSLKSLDISGTGTSDVDLCGICKSLCIEKLILK 210
Query: 504 FCKM 507
CK+
Sbjct: 211 RCKL 214
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 156/374 (41%), Gaps = 49/374 (13%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAG-MKHLLSISTLEKLWLSETGLTADGIALLSSLQ 164
S + L + L+EL + V V + G + HL I TL LS TG+ + + LS +
Sbjct: 4 SDVRPLCDVQTLEELTIRDSVGVVNLGNIGHLPRIHTL---ALSGTGVIDECLCGLSLSK 60
Query: 165 NLSVLDLGG-LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
+L +DL G L + D+ L + LE +D+ G G L P L +L TG
Sbjct: 61 SLRRIDLCGCLRIKDV--EPLSQIQTLEEVDVSGCFPCVCGIGALGKLPHLRYLKATLTG 118
Query: 224 VTKLPNISSLEC---LNLSNCTIDSILEGNE---NKAPLAKIS------LAGTTFINERE 271
+ EC L++S C + +L E N LA+I+ L+ + E
Sbjct: 119 IRD-------ECLVRLSVSRCLVKLLLSNCERLTNVQCLARITSLEELDLSDCVNVTEGI 171
Query: 272 AFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--AN 327
L SL S LD+S + S C + + +E L L + D V C+
Sbjct: 172 GDLGRLPSLKS-LDISGTGTSDVDLCGICKSLCIEKLILKRCKLITD----VFCLQNLPT 226
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L+++N+ G G+ + LP L L + T + D + +SM SL ++I
Sbjct: 227 LQHVNIGECSNIIEGFGVFS-VLPELRTLYVHHTAVTDNDLRAISMSNSLVSLNI----- 280
Query: 388 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
A + ++ L +L LE +N+ + + L +S+ L L + ++
Sbjct: 281 --------ASCSQIADVSCLSDLKTLEEININLCEGINKGLVEVSSLPNLRSLDACSTAV 332
Query: 448 TDVSLHQLSSLSKL 461
D L +++ + L
Sbjct: 333 DDNCLEKIAGSTTL 346
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 161/378 (42%), Gaps = 70/378 (18%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
+ LG +LR L A + L L+ CL +L LS C ++T+ ++ L I++
Sbjct: 99 GIGALGKLPHLRYLK-ATLTGIRDECLVRLSVSRCLVKLLLSNCERLTN--VQCLARITS 155
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
LE+L LS+ +GI L L +L LD+ G +D +DL G
Sbjct: 156 LEELDLSDCVNVTEGIGDLGRLPSLKSLDISGTGTSD--------------VDLCGIC-- 199
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS- 260
+ + K+ + L T V L N+ +L+ +N+ C+ +I+EG + L ++
Sbjct: 200 -KSLCIEKLILKRCKL---ITDVFCLQNLPTLQHVNIGECS--NIIEGFGVFSVLPELRT 253
Query: 261 --LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 318
+ T + + + SL+S S S ++ L+ +K LE ++++
Sbjct: 254 LYVHHTAVTDNDLRAISMSNSLVSLNIASCSQIADVSCLSDLKTLEEININ--------- 304
Query: 319 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 378
C G N + +S+ LPNL L T +DD + ++ +L+
Sbjct: 305 ---LCEGINKGLVEVSS--------------LPNLRSLDACSTAVDDNCLEKIAGSTTLE 347
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKEL 437
+G++ TD +T L + LE +NL++ T +S + LS+ L
Sbjct: 348 ---------RGYLAGCVNITD----VTPLVAVKSLEYVNLDECTGISG--IKELSSLPLL 392
Query: 438 IHLSLRNASLTDVSLHQL 455
+SLR +++ L +L
Sbjct: 393 RVISLRGTRISEEELKEL 410
>gi|423447642|ref|ZP_17424521.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
gi|401130053|gb|EJQ37722.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
Length = 710
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|343421641|emb|CCD18751.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 518
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 186/443 (41%), Gaps = 64/443 (14%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRV--TSSALWALTGMT 115
SL EV HNA AI ++G F + L V RV T L +LT
Sbjct: 110 SLEEVALHNASAI-------------VHIGKFGRMPCLRVLTLHRVGVTDDFLCSLTTSG 156
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L L+L+ C ++TD ++ L SI TLE++ LS + G+A L SL L L+L
Sbjct: 157 SLTHLNLTECSRLTD--VEPLASIKTLEQVNLSGSFPGVRGLAALGSLPRLRELNLKHTA 214
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-AWTGVTKLPNISSLE 234
VTD L++L + K RL ++ T VT L ISSL+
Sbjct: 215 VTDDCLKTL---------------------SASKTLVRLFLVDCRRLTDVTPLVKISSLQ 253
Query: 235 CLNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
++LS+C+ I + G + L +SL GT +E+ L SL S L+
Sbjct: 254 VVDLSDCSGITKGMGGFGTLSGLYALSLTGTALTDEQLQELCASQSLESLSIKRCKLLTD 313
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLP 351
L + L LD+S D V C + LR L F+ L P
Sbjct: 314 VGVLGFVTTLRELDMSEC----DGVARGFCSFSALRELRSLYMTFTCVTNECLCEISKCP 369
Query: 352 NLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNT----DIKGFIQQVGAETDLVLSLTA 406
L LS++G ++ D IS +S + +L+ ++++ D G + + L +S TA
Sbjct: 370 QLVKLSVAGCKKLTD--ISCLSQVHTLEDLNVNMCEHIEDGLGVLGGLEELRTLRMSFTA 427
Query: 407 LQN--------LNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 457
+ N LER LE + ++D + L+ + L+ L+L + +L
Sbjct: 428 VGNDELRLVCKSKTLERSELEGCERITDVS--ALAVAQSLMFLNLDRCQKVVTGVGELGK 485
Query: 458 LSKLTNLSIRDAVLTNSGLGSFK 480
L L +S++ +T + S K
Sbjct: 486 LPALRVVSLQGVSVTEDDMKSLK 508
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGF-----IQQVGAET 398
G +P L +L+L + D + ++ SL ++++ TD++ ++QV
Sbjct: 129 GRMPCLRVLTLHRVGVTDDFLCSLTTSGSLTHLNLTECSRLTDVEPLASIKTLEQVNLSG 188
Query: 399 DL--VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQL 455
V L AL +L L LNL+ T V+D L LS K L+ L L + LTDV+ L
Sbjct: 189 SFPGVRGLAALGSLPRLRELNLKHTAVTDDCLKTLSASKTLVRLFLVDCRRLTDVT--PL 246
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 505
+S L + + D G+G F L L L G LT++ + + C
Sbjct: 247 VKISSLQVVDLSDCSGITKGMGGFGTLSGLYALSLTGTA-LTDEQLQELC 295
>gi|229116621|ref|ZP_04246007.1| Internalin [Bacillus cereus Rock1-3]
gi|228666793|gb|EEL22249.1| Internalin [Bacillus cereus Rock1-3]
Length = 705
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 387
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 363
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 364 PLYALPLKDLVLT 376
>gi|229097621|ref|ZP_04228579.1| Internalin [Bacillus cereus Rock3-29]
gi|228685760|gb|EEL39680.1| Internalin [Bacillus cereus Rock3-29]
Length = 726
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 387
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ + PLS+ K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITN--VAPLSSLKNVTYLTL--------AGNQVEDIT 363
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 364 PLYALPLKDLVLT 376
>gi|290996272|ref|XP_002680706.1| hypothetical protein NAEGRDRAFT_63852 [Naegleria gruberi]
gi|284094328|gb|EFC47962.1| hypothetical protein NAEGRDRAFT_63852 [Naegleria gruberi]
Length = 418
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC---LNLSNCTI 243
LTKLE + + G VS+ ++FP L+ L + +T L NI+ LE L++ C
Sbjct: 148 LTKLEKI-ILGGNVSDENVQQFQLFPNLTSLKIPQGHITNLKNIAKLEKLTELDIGECC- 205
Query: 244 DSILEGNENKAPLA------KISLAGTTFINEREAFLYIETSLLSFLDVSNS--SLSRFC 295
D +L+ + +PLA +SL+ F E + L+S LDVS+S ++
Sbjct: 206 DIVLD--DGLSPLALMKNLTSLSLSKIVFAPEEYKPITQLPRLVS-LDVSSSDNTVESIK 262
Query: 296 FLT-QMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
LT +K L ++S++ +IGD++ ++ L LN+SNT GV + L L
Sbjct: 263 ILTSSLKQLTIFNISNNFLIGDEAARLIGESLKQLTFLNISNTNLQPQGVKYIC-ELTEL 321
Query: 354 EILSLSGTQIDDYAISYM---SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
L + QI D + ++ L +D+ NT ++ E L +L L
Sbjct: 322 RHLEMGENQIFDQEVVFICKSKFSSKLTNLDLKNT-------RISKE-----CLKSLSTL 369
Query: 411 NHLERLNLEQTQVSDATL-FPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
++L+ LNL T++ + + FP FK+L L+L+ +L L +L++ ++
Sbjct: 370 DNLQYLNLMFTEIDKSNITFP---FKKLRFLTLKENNLDGDELEELTNFNQ 417
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 54/274 (19%)
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETG-----LTADGIALLSSLQNLSVLDLGGLPVTDLV 180
+K+ + +L +I+ LEKL + G + DG++ L+ ++NL+ L L
Sbjct: 177 LKIPQGHITNLKNIAKLEKLTELDIGECCDIVLDDGLSPLALMKNLTSLSLS-------- 228
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
++ F + +T+LP + SL+ ++ S+
Sbjct: 229 --------------------------------KIVFAPEEYKPITQLPRLVSLD-VSSSD 255
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSNSSLSR--FCFL 297
T++SI + L +++ I + A L E+ L+FL++SN++L ++
Sbjct: 256 NTVESIKILTSSLKQLTIFNISNNFLIGDEAARLIGESLKQLTFLNISNTNLQPQGVKYI 315
Query: 298 TQMKALEHLDLSSSMIGDDSVEMV--ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
++ L HL++ + I D V + + + L NL+L NTR S + L+ L NL+
Sbjct: 316 CELTELRHLEMGENQIFDQEVVFICKSKFSSKLTNLDLKNTRISKECLKSLST-LDNLQY 374
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
L+L T+ID I++ L+F+ + ++ G
Sbjct: 375 LNLMFTEIDKSNITF--PFKKLRFLTLKENNLDG 406
>gi|254933382|ref|ZP_05266741.1| cell wall surface anchor family protein [Listeria monocytogenes
HPB2262]
gi|405748685|ref|YP_006672151.1| internalin I [Listeria monocytogenes ATCC 19117]
gi|424822071|ref|ZP_18247084.1| Internalin-I [Listeria monocytogenes str. Scott A]
gi|293584944|gb|EFF96976.1| cell wall surface anchor family protein [Listeria monocytogenes
HPB2262]
gi|332310751|gb|EGJ23846.1| Internalin-I [Listeria monocytogenes str. Scott A]
gi|404217885|emb|CBY69249.1| internalin I (LPXTG motif) [Listeria monocytogenes ATCC 19117]
Length = 1775
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 78/415 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D + +T+ + A+T M LK L L C +T G L ++
Sbjct: 377 EDLGTLNNLPKLQTLILSDNKDLTN--INAVTDMPQLKTLALDGC-GITSIGT--LDNLP 431
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E LT S+ ++ LP +L YLD+ + +
Sbjct: 432 KLEKLDLKENQLT-------------SISEINDLP-------------RLSYLDVSVNYL 465
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 466 TTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSL 521
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + + L +D SN+ ++ + L++LD+ S+ I + S
Sbjct: 522 KEFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTS 579
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL L + F+ G LP LEIL ++
Sbjct: 580 VIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT-- 637
Query: 362 QIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LN
Sbjct: 638 --DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELN 687
Query: 418 L-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 468
L + +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 688 LRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 169/401 (42%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L L NL
Sbjct: 310 SLATLKGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNL 366
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ AV M P+L L L G+T
Sbjct: 367 VNITADSCAIEDL--GTLNNLPKLQTLILSDNKDLTNINAVTDM-PQLKTLALDGCGITS 423
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L + SI E N+ L + LS+
Sbjct: 424 IGTLDNLPKLEKLDLKENQLTSISEIND----LPR----------------------LSY 457
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS + L+ L ++ LE L++SS+ + D V + + L +N+SN + G
Sbjct: 458 LDVSVNYLTTIGELKKLPLLEWLNVSSNRLSD--VSTLTNFPS-LNYINVSNNVIRTVG- 513
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 514 --KMTELPSLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLD 569
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + + + + +L LE + +++ + T L L+ + S + SL
Sbjct: 570 VHSNRITNTSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAP 624
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L KL L + D LG+ L+ L+L +L
Sbjct: 625 IGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|18378037|emb|CAD21749.1| hypothetical leucine-rich repeat protein 1, LRRP1 [Trypanosoma
brucei]
Length = 1394
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 183/436 (41%), Gaps = 86/436 (19%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L +L +S C +TDA + + LE+L L+ GI L L L +LDL G+PV
Sbjct: 250 LSKLSVSECNNITDA--TPISQLEALEELNLNSCYHITKGIGTLGMLLRLRILDLSGVPV 307
Query: 177 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 213
D L+ SL+ L T E L+L G + RG V+ P+
Sbjct: 308 EDNCLKGLCDCGSLERLNISYCIQLKDINPLSNATATEELNLNGCRRITRGIGVVWALPK 367
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L L++ ++LS ++DS+ G PL K+SL +
Sbjct: 368 LRVLHMKD--------------VHLSEPSLDSVGTG----GPLVKVSLDNCAGFGDMTLL 409
Query: 274 LYIET----------------------SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLS 309
I T L L++ + +S F + K+L L++
Sbjct: 410 SSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNM- 468
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
S+ G +VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++
Sbjct: 469 ESITGLSNVEALANI-LTLEKLSLHGCTDIDAGIGCL-GNLPQLKMLDLSGTNTDNESLR 526
Query: 370 YMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLN 417
+ + ++ +++S+ T++ I + A +L LS A++ L L
Sbjct: 527 SLCLSQTMVSLNLSHCWKMTNV-SHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAI 585
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
L T ++D + S K L+ L L + L DV+ LS+++ L +L++ + GL
Sbjct: 586 LPNTHITDRDISHFSNCKNLVTLDLSFCNKLLDVT--TLSNITTLEDLNLDNCSNIRKGL 643
Query: 477 GSFKPPRSLKLLDLHG 492
L +L++ G
Sbjct: 644 SVLGELPRLCVLNIKG 659
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 158/383 (41%), Gaps = 64/383 (16%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R + + +HL +I TLEKL +++T + I +S L NL LDL + D +R
Sbjct: 185 RSNNIDNNDARHLFNIGTLEKLAITDT-MQLTNIRGISRLTNLMCLDLNSTNIDDSCVRR 243
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 243
+ KL L + S+ +N T T + + +LE LNL++C
Sbjct: 244 ICACVKLSKLSV--SECNN------------------ITDATPISQLEALEELNLNSCY- 282
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
I +G I L + LS + V ++ L C +L
Sbjct: 283 -HITKG-----------------IGTLGMLLRLRILDLSGVPVEDNCLKGLC---DCGSL 321
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
E L++S + D + LNL+ R + G+G++ LP L +L + +
Sbjct: 322 ERLNISYCIQLKDINPLSNATAT--EELNLNGCRRITRGIGVVWA-LPKLRVLHMKDVHL 378
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGF-----------IQQVGAE--TDLVLSLTALQNL 410
+ ++ + L + + N GF ++++ + D++ + L L
Sbjct: 379 SEPSLDSVGTGGPLVKVSLDNC--AGFGDMTLLSSIVTLEELNIQKCADIISGVGCLGTL 436
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDA 469
+L LN+++ +S + K L+ L++ S+T +S + L+++ L LS+
Sbjct: 437 PYLRVLNIKEAHISSLDFTGIGASKSLLQLNME--SITGLSNVEALANILTLEKLSLHGC 494
Query: 470 VLTNSGLGSFKPPRSLKLLDLHG 492
++G+G LK+LDL G
Sbjct: 495 TDIDAGIGCLGNLPQLKMLDLSG 517
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 198/474 (41%), Gaps = 99/474 (20%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA----GMKHLLSISTLEKLWL 147
L SLN++ C+++TS + A+ +T L+EL++ C VT G H L ++TL
Sbjct: 748 LVSLNLSHCKKITS--ISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATL----- 800
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
S T + + + +S ++L+ L+L +TD+ +L +T LE L+L +G
Sbjct: 801 SNTRINDENVRHVSECKSLNTLNLAFCKDITDVT--ALSKITMLEELNLDCCPNIRKGIE 858
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
L P+ L++ ++ + + +C SIL N L K++L +
Sbjct: 859 TLGTLPKARILSMKEC---QIGDSDAQQC---------SILG---NSKSLVKLNLERSRG 903
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL---DLSSSMIGDDSVEMVAC 323
+A I T LD + C + L HL ++ + I D + ++
Sbjct: 904 RISVKALSNIATLEELVLDHA----QEVCCIPSFSCLPHLRVLNVKYTDINGDVTKNIS- 958
Query: 324 VGANLRNLNLSNTRFSSAGVGILA-----------------------GHLPNLEILSLSG 360
+LR LNLS+ ++ + + +L+ G LP L + LS
Sbjct: 959 ESKSLRLLNLSHCKWVT-DISVLSSLSTLEKLNVKCCNGIRKGWESLGKLPLLRVAILSD 1017
Query: 361 TQI---DDYAISYMSMMPSLKFI---DISNTDIKGFIQQ-----VGAETDLVLSLTALQN 409
T I D +S + LKF +S+ + IQ V + +D + L AL
Sbjct: 1018 TNITAKDIACLSSCKTLVKLKFFRCEKLSDVTVVYKIQSLEELMVRSCSDGLKGLNALGT 1077
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRD 468
L L L+L + SD ++ + T K L+ L++ LT+ + LS+++ L LS+RD
Sbjct: 1078 LPRLRFLHLRNLKGSDISVESIGTSKSLVRLNIEMREELTNAT--PLSNITSLEELSLRD 1135
Query: 469 AVLTNSGLGSF-KPPR-----------------------SLKLLDLHGGWLLTE 498
G+G+ K PR S+ L+L W LT+
Sbjct: 1136 CGDNLEGVGTLGKLPRLKSLDLGLSRISDDTLDDICLSRSITSLNLASSWKLTD 1189
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 203/513 (39%), Gaps = 95/513 (18%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ LG L LN+ + S + +L +L L C D +K L ++ TL
Sbjct: 643 LSVLGELPRLCVLNIKGVH-LKDSVIGSLGNGNSFVKLSLENCKGFGD--VKPLSNLVTL 699
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
E+L L G+ L L L VLDLG V + LE + S + +
Sbjct: 700 EELNLHYCDKVTSGMGTLGRLLQLRVLDLGRTQVDN---------NSLENICTSSSPLVS 750
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA 262
+ K T ++ + ++++LE LN+ NC ++ G L ++ +A
Sbjct: 751 LNLSHCKKI----------TSISAIASLTALEELNIDNCC--NVTSGWNVFGTLHQLRVA 798
Query: 263 --GTTFINEREAFLYIETSLLSFL------DVSN-SSLSRFCFLTQM---------KALE 304
T IN+ E L+ L D+++ ++LS+ L ++ K +E
Sbjct: 799 TLSNTRINDENVRHVSECKSLNTLNLAFCKDITDVTALSKITMLEELNLDCCPNIRKGIE 858
Query: 305 H---------LDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILA-GHLPN 352
L + IGD + + +G +L LNL +R + + A ++
Sbjct: 859 TLGTLPKARILSMKECQIGDSDAQQCSILGNSKSLVKLNLERSR---GRISVKALSNIAT 915
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET-----------DLV 401
LE L L Q + I S +P L+ +++ TDI G + + +E+ V
Sbjct: 916 LEELVLDHAQ-EVCCIPSFSCLPHLRVLNVKYTDINGDVTKNISESKSLRLLNLSHCKWV 974
Query: 402 LSLTALQNLNHLERLN------------------------LEQTQVSDATLFPLSTFKEL 437
++ L +L+ LE+LN L T ++ + LS+ K L
Sbjct: 975 TDISVLSSLSTLEKLNVKCCNGIRKGWESLGKLPLLRVAILSDTNITAKDIACLSSCKTL 1034
Query: 438 IHLS-LRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L R L+DV+ ++++ SL +L S D + + LG+ R L L +L G +
Sbjct: 1035 VKLKFFRCEKLSDVTVVYKIQSLEELMVRSCSDGLKGLNALGTLPRLRFLHLRNLKGSDI 1094
Query: 496 LTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 528
E + IE+ EL+ P I S
Sbjct: 1095 SVESIGTSKSLVRLNIEMREELTNATPLSNITS 1127
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 113/296 (38%), Gaps = 56/296 (18%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
E + ++ N + W + LG LR ++D +T+ + L+ L +L RC K
Sbjct: 987 EKLNVKCCNGIRKGWES-LGKLPLLRVAILSD-TNITAKDIACLSSCKTLVKLKFFRCEK 1044
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS---- 183
++D + + I +LE+L + G+ L +L L L L L +D+ + S
Sbjct: 1045 LSDVTVVY--KIQSLEELMVRSCSDGLKGLNALGTLPRLRFLHLRNLKGSDISVESIGTS 1102
Query: 184 -------------------LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----- 219
L +T LE L L + G L PRL L+L
Sbjct: 1103 KSLVRLNIEMREELTNATPLSNITSLEELSLRDCGDNLEGVGTLGKLPRLKSLDLGLSRI 1162
Query: 220 ---------------------AW--TGVTKLPNISSLECLNLSNC-TIDSILEGNENKAP 255
+W T ++ + N+++LE +NLS C I+S +
Sbjct: 1163 SDDTLDDICLSRSITSLNLASSWKLTDISHISNLTALEEMNLSGCYPINSGWKALSELPR 1222
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
L ++L + + + L L++ S ++ ++ +K LE L + S
Sbjct: 1223 LRVVNLESASVTTRYDGYYISRCKYLVTLNIQLSDMTDASYIANIKTLEELRIGKS 1278
>gi|391340788|ref|XP_003744718.1| PREDICTED: chaoptin-like [Metaseiulus occidentalis]
Length = 1224
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 191/438 (43%), Gaps = 47/438 (10%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
++ A+ + L + YL ++N A L +T LK LDL ++ + +
Sbjct: 448 TIPADLIDLLRSVEYLNAMNNA------LEGFINLANLTTLKRLDL----RLNPRLREDV 497
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
L S++++L S T ++ D I + + + LS P L Q L +DL
Sbjct: 498 LIGSSIQELDFSFTKISTDFI--IPTARRLSKYSFQLFPSESLRSLFAQNFPDLTTIDLR 555
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS-----SLECLNLS-----NCTIDSI 246
S +S G+ L P L F++L+ + L ++ +L+ L+LS N ++ S
Sbjct: 556 YSAISRVGSNALYYLPNLEFVHLSHCRIDTLDEVAFNRLPALQLLDLSHNRLRNLSLSSF 615
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN------SSLSRFCFLTQM 300
+ ++ + + L+ + R ++E +++ V N S + FLT
Sbjct: 616 CQLSDFDIVPSTVDLSHNQIKSLRAQDDHLEYECQNYITVLNLKHNHISDIDFDAFLTVK 675
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
L LDLS +++GD ++ + R LNLS+ R + + G L NL+ L LS
Sbjct: 676 NTLLELDLSHNLLGDQQLKKFIDLKRVSR-LNLSHNRLAMLPRRAMTG-LFNLQELDLSS 733
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
I S ++ +P L+ +D+S+ +I + + A N +E LNLE+
Sbjct: 734 NLIQQITPSALASLPKLRAVDLSSNNIS------------FIPIDAF-NGTSIEVLNLER 780
Query: 421 TQV---SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 477
Q+ +A + + ++LS N + ++ + + L++L +LSI + + G
Sbjct: 781 NQLPSLKNAAFRSIGSNLTELYLS-HNDDMHALTNGEFAYLTQLLHLSISNCGIKTITPG 839
Query: 478 SFKPPRSLKLLDLHGGWL 495
SF L LD+ WL
Sbjct: 840 SFNDLSLLISLDISNNWL 857
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 42/328 (12%)
Query: 173 GLPVTDLVLRSLQVL-------TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
GL V D+ S+++L T L LD+ + + GA+ K L NLA ++
Sbjct: 388 GLKVLDVSKNSIRLLSEDSFPFTNLHTLDISDNAMLTIGASPFKYLVNLKDFNLAHNRLS 447
Query: 226 KLPN-----ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 280
+P + S+E LN +++ LEG N A L + +N R + S
Sbjct: 448 TIPADLIDLLRSVEYLN----AMNNALEGFINLANLTTLKRLDLR-LNPRLREDVLIGSS 502
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE-MVACVGANLRNLNLSNTRFS 339
+ LD S + +S + + L S + +S+ + A +L ++L + S
Sbjct: 503 IQELDFSFTKISTDFIIPTARRLSKY--SFQLFPSESLRSLFAQNFPDLTTIDLRYSAIS 560
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-----NTDIKGFIQQ- 393
G L +LPNLE + LS +ID + +P+L+ +D+S N + F Q
Sbjct: 561 RVGSNALY-YLPNLEFVHLSHCRIDTLDEVAFNRLPALQLLDLSHNRLRNLSLSSFCQLS 619
Query: 394 ----VGAETDL----VLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE-LI 438
V + DL + SL A + N++ LNL+ +SD T K L+
Sbjct: 620 DFDIVPSTVDLSHNQIKSLRAQDDHLEYECQNYITVLNLKHNHISDIDFDAFLTVKNTLL 679
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L L + L D L + L +++ L++
Sbjct: 680 ELDLSHNLLGDQQLKKFIDLKRVSRLNL 707
>gi|423379089|ref|ZP_17356373.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
gi|423623795|ref|ZP_17599573.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401257718|gb|EJR63915.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401633535|gb|EJS51312.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
Length = 717
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|407424780|gb|EKF39143.1| hypothetical protein MOQ_000636 [Trypanosoma cruzi marinkellei]
Length = 936
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 200/475 (42%), Gaps = 79/475 (16%)
Query: 100 CRRVTSSALWALTGMTC-----------LKELDLSRCVKVTDAGMKHLLSISTLEKL-WL 147
CR V +L + ++C L++LDLS +VT+ GM +S L+KL L
Sbjct: 347 CRHVEQLSLCMSSSVSCTRFLRHRSLCALRDLDLSY-TQVTEEGMHR--DVSRLKKLSRL 403
Query: 148 SETGLTA-DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGA 205
S G +G+ L +L L LDLG VTD L +L+ +L LDL W ++++
Sbjct: 404 SLEGCRKIEGLQWLRALTQLRELDLGYSSVTDDSLTALRFCPELVRLDLQWCGRITSLKC 463
Query: 206 AVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
V + L LNL T VT L + ++LE ++L C S + N L ++
Sbjct: 464 LVGALCDSLRELNLTETSVTDEGLVPLKDFAALEWISLEGCGAVSDVNVLCNLTRLREVD 523
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
+ T N L +L + L+ FL ++ LE +DLS + ++ +
Sbjct: 524 VGRTRVTNGGVLSLSQCQALRAMRMRQCYRLTDASFLGALQQLEEVDLSDCPVTNEGIAA 583
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS-------- 372
+ C +LR L L + S V L G L +L +L L T +D+ ++
Sbjct: 584 L-CGARSLRKLQLQSCHAVS-DVNFLGG-LEHLMLLDLHHTTVDEAGSVGLAQCPQLTTL 640
Query: 373 -----------------MMPSLKFIDISNT----DIKGFIQQVGA-ETDLVLSLTALQNL 410
+P LK +D+S T D F++ ET LSL +N+
Sbjct: 641 IMHSVLVHSLQHWNAALFLPRLKRLDLSTTKVTSDALSFLRMCPILET---LSLRGCKNI 697
Query: 411 NHLERLNLEQTQ------VSDATLFPLSTFKELI---------------HLSLRNASLTD 449
HL+ L ++ + ++ P T ++I ++++ + ++
Sbjct: 698 THLDFLIIQTSSGVGVCGIAPHDAEPHDTLVDIIAGKEKNPDDGPSPIENMTINDGAIKS 757
Query: 450 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
+ + +L L++ D +TN GL + + L+ L L +TE A+L++
Sbjct: 758 TAAAPVVGRHRLRELTLSDTGVTNDGLRALQYCPGLERLRLAHCKNVTEVAVLRW 812
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 140/331 (42%), Gaps = 54/331 (16%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR ++V RVT+ + +L+ L+ + + +C ++TDA L ++ LE++ LS+
Sbjct: 519 LREVDVGR-TRVTNGGVLSLSQCQALRAMRMRQCYRLTDASF--LGALQQLEEVDLSDCP 575
Query: 152 LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+T +GIA L ++L L L V+D+ L L L LDL + V G+ L
Sbjct: 576 VTNEGIAALCGARSLRKLQLQSCHAVSDVNF--LGGLEHLMLLDLHHTTVDEAGSVGLAQ 633
Query: 211 FPRLSFLNL---------AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 260
P+L+ L + W LP + L+ L+ + T D++ P L +S
Sbjct: 634 CPQLTTLIMHSVLVHSLQHWNAALFLPRLKRLD-LSTTKVTSDAL--SFLRMCPILETLS 690
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG-----D 315
L G I L FL + SS C + A H L + G D
Sbjct: 691 LRGCKNITH-----------LDFLIIQTSSGVGVCGIAPHDAEPHDTLVDIIAGKEKNPD 739
Query: 316 D----------------SVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
D S VG + LR L LS+T ++ G+ L + P LE L L
Sbjct: 740 DGPSPIENMTINDGAIKSTAAAPVVGRHRLRELTLSDTGVTNDGLRALQ-YCPGLERLRL 798
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
+ + + ++ + + LK +D+S T + G
Sbjct: 799 AHCK-NVTEVAVLRWLSQLKELDLSATGVTG 828
>gi|423540177|ref|ZP_17516568.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
gi|401173712|gb|EJQ80924.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
Length = 710
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|423546410|ref|ZP_17522768.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB5-5]
gi|401180979|gb|EJQ88133.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB5-5]
Length = 710
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|423534546|ref|ZP_17510964.1| hypothetical protein IGI_02378, partial [Bacillus cereus HuB2-9]
gi|402462963|gb|EJV94666.1| hypothetical protein IGI_02378, partial [Bacillus cereus HuB2-9]
Length = 618
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|46447568|ref|YP_008933.1| hypothetical protein pc1934 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401209|emb|CAF24658.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 261
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 19/235 (8%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-- 149
L+ LN++ C ++T++ L LT + L+ L+LSRC ++TDAG+ HL ++ L+ L LS
Sbjct: 3 LKYLNLSGCSKLTNAGLAHLTPLKTLQHLNLSRCSRLTDAGLAHLTPLTALQHLGLSYCE 62
Query: 150 --TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAA 206
T +ALL++LQ+L++ + L TD+ L L LT L++LDL +++ G
Sbjct: 63 NLTDAGLAHLALLTALQDLALANCKHL--TDVGLVHLTPLTSLQHLDLSNCMNLTDDGLV 120
Query: 207 VLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
L L L NL G+ L +++L+ L L + +G + APL +
Sbjct: 121 HLTPLTALQHLVLSGCDNLTDAGLAHLTPLTALQTLGLRRWCQNLTGDGLAHLAPLTALQ 180
Query: 261 LAGTTFI-NEREAFLYIETSLLSFLDVSNSSLSR-----FCFLTQMKALEHLDLS 309
++ N ++A L T L + + S+ L + AL+HLDLS
Sbjct: 181 TLDLSYCKNLKDAGLAHLTPLTALQTLGLKWCSKLTDAGLAHLKPLAALQHLDLS 235
>gi|290996867|ref|XP_002681003.1| predicted protein [Naegleria gruberi]
gi|284094626|gb|EFC48259.1| predicted protein [Naegleria gruberi]
Length = 518
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 177/388 (45%), Gaps = 38/388 (9%)
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD----LVLRSLQVLTKLEYL 193
S+S L KL + +TGL I++L +L+NL+ L+L L + D ++ + L+ +TKL +
Sbjct: 106 SMSQLTKLDVGKTGLHTFPISILPNLENLTELNLTFLEIFDQGAKIISQRLKFITKLS-V 164
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCT-----I 243
D G + G + +L+FLN++ + + + L+ L++ N T +
Sbjct: 165 DYCG--IGIEGVQAIGNMKQLTFLNISENEMRNEEIELIGTLDQLKYLSIRNITRENNSV 222
Query: 244 DSILEGN--ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQ 299
D L+ N +N L +++ +E E L+ L+V+N + +++
Sbjct: 223 DDYLDFNSLKNLKLLTYLNIGENRISDEIGLQFLREMKQLTHLNVANMEIGSIGAKIISE 282
Query: 300 MKALEHLDLSSSMIGDDSV----EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
M L L++ + IG + EM N++N NL +F L G + L+
Sbjct: 283 MTHLVKLNIGRNDIGRTGIDYIGEMKQLTSLNVQNCNLMECKF-------LCG-MKQLQY 334
Query: 356 LSLSGTQIDDYAISYM-SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 414
L++S I + + + + LKF++IS + + L + L L LN L
Sbjct: 335 LNISENTIRNEGVDLICKELSQLKFLNISEILSRPY----QFRNVLPIKLENLPRLNQLT 390
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
L+L +V++ +L L K L L++R S+T +S +S+LT L+I + +
Sbjct: 391 ELDLSSDRVNEESLIFLLELKCLTSLNVRRNSITCNCAKIISGMSQLTKLNISETQVDEL 450
Query: 475 GLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
+ + L++L + +L + ++
Sbjct: 451 VMEYICGMKELRVLYMQKNYLENDSEVV 478
>gi|386333501|ref|YP_006029671.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334195950|gb|AEG69135.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 462
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 57/319 (17%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTAD-------------------- 155
L+ELDLS C +T G+ HLL++ L++L +S GL AD
Sbjct: 146 LRELDLSLCEGPITAVGIAHLLALP-LDRLDVSGCGLNADSARLLAGHATLTALNLRRNA 204
Query: 156 ----GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
G+A + + L+ L++ G + +R+L T + LD+ +++ + GA L
Sbjct: 205 IGDAGVAAFARNKKLTTLNVSGNGIGPAGVRALAANTTITTLDISDNEIGDEGARALASN 264
Query: 212 PRLSFLN-----LAWTGVTKLPNISSLECLNLS--------------NCTIDSILE-GNE 251
L+ L+ + G L ++L L+LS N T+ ++ GNE
Sbjct: 265 AALTRLDASDCGIGPDGTQALATSTTLTSLDLSYNEIEAEGVEALGRNTTLRTLHACGNE 324
Query: 252 NKAPLAKISLAGTTF---------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
A++ A TT I A + + L+ L++SN+ + R
Sbjct: 325 LGHREAELLAASTTLTVLNLSSNAIGNAGARAFGANTTLAELNLSNNGIERVPAWADTGK 384
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
L LDLS++ IGD + +++A L LN+ + R AG LAG+ L L +S +
Sbjct: 385 LTTLDLSNNRIGDAAAQVLAAS-RTLTTLNVGSNRIGDAGACALAGNT-TLATLDVSLNR 442
Query: 363 IDDYAISYMSMMPSLKFID 381
I + ++ +LK ++
Sbjct: 443 IGKAGMLALAANTTLKKLE 461
>gi|423442133|ref|ZP_17419039.1| hypothetical protein IEA_02463, partial [Bacillus cereus BAG4X2-1]
gi|402416089|gb|EJV48408.1| hypothetical protein IEA_02463, partial [Bacillus cereus BAG4X2-1]
Length = 595
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|241724224|ref|XP_002413721.1| F-box/LRR-repeat protein, putative [Ixodes scapularis]
gi|215507537|gb|EEC17029.1| F-box/LRR-repeat protein, putative [Ixodes scapularis]
Length = 315
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 82/343 (23%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSE 149
L L + DC V+ L L+ + L LDLS C+ VTDAG++H+ IS+L+KL L
Sbjct: 1 LEYLGLEDCALVSDLGLEYLSLRLKNLVSLDLSMCLSVTDAGLEHIAKISSLKKLTLLGC 60
Query: 150 TGLTAD--------------------------GIALLS---SLQNLSVLDLGGLPVTD-- 178
LT+ GI +++ L +L+ L++ P+TD
Sbjct: 61 EDLTSQSMFHLATARFRLNCLIISYCNQIEDTGIHMINRGQGLVSLTTLNVNACPITDVG 120
Query: 179 --LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM-FPRLSFLNLA-WTGVTK-----LPN 229
+V L+ LT L + VS G +V+ +L F+N+ TG+T L
Sbjct: 121 LSVVAEKLRDLTALNISEC--EYVSKDGISVVAANLRKLRFINMRLCTGLTNISLKHLAR 178
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+SSLE +NL CT KI+ G F+ E ++S+L LDVS +
Sbjct: 179 MSSLEVINLKGCT---------------KITGKGMAFMASGEG----QSSVLE-LDVSFT 218
Query: 290 SL--SRFCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-------RFS 339
S+ + ++ Q M+ L L L +I D + +A RNL+ NT R +
Sbjct: 219 SIGDTGLRYIAQGMQKLRSLSLCGCLISDKGLTRIA------RNLHALNTLKISRCSRIT 272
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYA--ISYMSMMPSLKFI 380
G+ ++A +L L + L G A S + +P LKF+
Sbjct: 273 DNGIKVVACNLKRLRQIDLKGCSRITSAGKRSLVVRLPHLKFL 315
>gi|46445832|ref|YP_007197.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399473|emb|CAF22922.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 329
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
F +L F + EAI + + L + L+ L + CR +T L L +
Sbjct: 175 FEKILNHFSNEIEAIHFSDNVYLTDAHLLTLKNCKNLKVLQLQACRNLTDVGLAHLAPLE 234
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 174
LK L+LS C +TDAG+ HL + L+ L L LT G+A L L L L+L G
Sbjct: 235 ALKHLNLSECDNLTDAGLAHLTLLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKGC 294
Query: 175 P-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAA 206
+TD+ L L+ L L++LDL G + +++ G A
Sbjct: 295 DNLTDIGLAHLRPLVALQHLDLDGCNNLTDAGLA 328
>gi|290982306|ref|XP_002673871.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284087458|gb|EFC41127.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 529
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 140/307 (45%), Gaps = 41/307 (13%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L +L++S C + G++ + +++ L KL +S + G LLS+L+NL LD+ +
Sbjct: 179 LTDLNVSYC-DIDATGIQFIRNMTCLIKLNISGNNINCKGALLLSNLKNLQELDIASACL 237
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLE 234
+ + + + L++L + +Q+ N GA + +L L+++ G L IS
Sbjct: 238 KEEGAKHISRMDNLKFLSISHNQILNGGAKAISSLSKLEILHISNCDIGCEGLQYISK-- 295
Query: 235 CLNLSNCT-ID----------SILEGNENKAPLAKIS-----LAGTTFINEREAFLYIET 278
NL N T ID I+ + N + I+ L G ++++ E Y+
Sbjct: 296 --NLKNLTEIDIGGNHFGMDGVIVIASMNNLKVLSIAESCLGLLGVQYLSKMENLTYLNI 353
Query: 279 S-----------------LLSFLDVSNS-SLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
S L + L +NS S+ ++ + L L++ S+ I D +E+
Sbjct: 354 SDNIDDIFIGESINDLQNLTTLLYTNNSLSMDEAITISSLTQLTTLNIESTEISDVHIEI 413
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
+ +L NL +S GV +++ + +LE L LSG +I D ++Y+ + L+ +
Sbjct: 414 LCSSLHHLINLYADTNFITSWGVKLISESMIDLESLYLSGNRIGDEGLTYICSLQHLRIL 473
Query: 381 DISNTDI 387
+ N +I
Sbjct: 474 GVCNCEI 480
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 148/351 (42%), Gaps = 73/351 (20%)
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT------------------- 225
+++ L +LD++GS + + G A L L LN+ +T
Sbjct: 100 KLMPNLIHLDIYGSDIEDSGVACLCKLKELKILNIGSNKLTSKGRGIEMISKFMKCLTNL 159
Query: 226 ------------KLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREA 272
K + L LN+S C ID+ ++ N L K++++G IN + A
Sbjct: 160 DISFNSLGNSGMKQLKLDKLTDLNVSYCDIDATGIQFIRNMTCLIKLNISGNN-INCKGA 218
Query: 273 FLYIETSLLSFLDVSNSSLS-------------RFCFLTQ-------------MKALEHL 306
L L LD++++ L +F ++ + LE L
Sbjct: 219 LLLSNLKNLQELDIASACLKEEGAKHISRMDNLKFLSISHNQILNGGAKAISSLSKLEIL 278
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
+S+ IG + ++ ++ NL +++ F GV ++A + NL++LS++ + +
Sbjct: 279 HISNCDIGCEGLQYISKNLKNLTEIDIGGNHFGMDGVIVIAS-MNNLKVLSIAESCLGLL 337
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
+ Y+S M +L +++IS+ FI + S+ LQNL L N +S
Sbjct: 338 GVQYLSKMENLTYLNISDNIDDIFIGE---------SINDLQNLTTLLYTN---NSLSMD 385
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQL-SSLSKLTNLSIRDAVLTNSGL 476
+S+ +L L++ + ++DV + L SSL L NL +T+ G+
Sbjct: 386 EAITISSLTQLTTLNIESTEISDVHIEILCSSLHHLINLYADTNFITSWGV 436
>gi|290993458|ref|XP_002679350.1| leucine rich repeat protein [Naegleria gruberi]
gi|284092966|gb|EFC46606.1| leucine rich repeat protein [Naegleria gruberi]
Length = 528
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 178/400 (44%), Gaps = 77/400 (19%)
Query: 117 LKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
L+ELDLS C + G+K L S+ L L +S+T A+G+ + ++NL+ L++ +
Sbjct: 130 LRELDLSGQNCYR---EGVKCLKSLKHLTVLNVSKTK-CANGVKYIGMIENLTSLNISSV 185
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 229
+ + + L L KL LD+ ++ A ++ L+FL++ G+ + +
Sbjct: 186 HLENQDVEHLSSLKKLTSLDVNNCNLTFEDADIISRLKSLTFLDIGNNDLGPLGLLPISS 245
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+ SL+ L+++ I+S E+ L K+ IN E LYI + D N
Sbjct: 246 MESLQTLHINRIWIES-----ESCESLTKM-------INLTE--LYISKN-----DFGNE 286
Query: 290 SLSRFCFLTQMKALEHLDLSSSMI----GDDSVEMVACVGANLRNLNLSNTRFSSAGVG- 344
L +++ MK L LD+ + I GD++ ++VA + L LN+S +S+G
Sbjct: 287 GLK---WISSMKNLRVLDIGNHSIIDALGDEAAKLVASL-TQLTYLNISQHEITSSGAKY 342
Query: 345 ----------ILAGH------------LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
+ G+ L L L++SG QI + +S +P L +DI
Sbjct: 343 LTSLTKLTTLFIDGNEICDDFLDSISSLKELTYLNISGGQISVKGVKSISKLPRLTILDI 402
Query: 383 SNTD--IKGFIQQVG----------AETDLVLSLTALQ----NLNHLERLNLEQTQVSDA 426
S ++Q+G + TDLV S+ + NL +L L + + D
Sbjct: 403 SECVGCCSEVLKQLGLMKQLTSLHLSLTDLVESVEGFKYWHKNLINLTYLEMNFCGLDDN 462
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+ +S L +L L++ LTD + L + KL LS+
Sbjct: 463 AIKWISGLPNLKYLDLQSNDLTDDCIQHLLGMKKLEYLSL 502
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 177/401 (44%), Gaps = 49/401 (12%)
Query: 28 RRQRRSLERLPAHLADSL-LRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYL 86
RR+ + L + D + HL LIF + + F +N ++L G+N E + L
Sbjct: 91 RREWKKLSQSHQKYIDRVECLHLKYNLLIFTIIQKRF-YNLRELDLSGQNCY-REGVKCL 148
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
+ ++L LNV+ + ++ + + + L L++S V + + ++HL S+ L L
Sbjct: 149 KSLKHLTVLNVSKTK--CANGVKYIGMIENLTSLNISS-VHLENQDVEHLSSLKKLTSLD 205
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGL---PVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
++ LT + ++S L++L+ LD+G P+ L + S++ L L +W + +
Sbjct: 206 VNNCNLTFEDADIISRLKSLTFLDIGNNDLGPLGLLPISSMESLQTLHINRIW---IESE 262
Query: 204 GAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL 261
L L+ L ++ G L ISS++ L + + SI++ ++A SL
Sbjct: 263 SCESLTKMINLTELYISKNDFGNEGLKWISSMKNLRVLDIGNHSIIDALGDEAAKLVASL 322
Query: 262 AGTTFINEREAFL---------YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
T++N + + + F+D + ++ +K L +L++S
Sbjct: 323 TQLTYLNISQHEITSSGAKYLTSLTKLTTLFIDGNEICDDFLDSISSLKELTYLNISGGQ 382
Query: 313 IGDDSVEMVA------------CVGA------------NLRNLNLSNTRFSSAGVGILAG 348
I V+ ++ CVG L +L+LS T + G
Sbjct: 383 ISVKGVKSISKLPRLTILDISECVGCCSEVLKQLGLMKQLTSLHLSLTDLVESVEGFKYW 442
Query: 349 H--LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
H L NL L ++ +DD AI ++S +P+LK++D+ + D+
Sbjct: 443 HKNLINLTYLEMNFCGLDDNAIKWISGLPNLKYLDLQSNDL 483
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 28/293 (9%)
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTIDS 245
L LDL G G LK L+ LN++ T GV + I +L LN+S+ +++
Sbjct: 130 LRELDLSGQNCYREGVKCLKSLKHLTVLNVSKTKCANGVKYIGMIENLTSLNISSVHLEN 189
Query: 246 ILEGNENKAPLAKISLAGTTFIN--EREAFLYIETSLLSFLDVSNSSLSRFCFL--TQMK 301
+ E+ + L K++ N +A + L+FLD+ N+ L L + M+
Sbjct: 190 --QDVEHLSSLKKLTSLDVNNCNLTFEDADIISRLKSLTFLDIGNNDLGPLGLLPISSME 247
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
+L+ L ++ I +S E + + NL L +S F + G+ ++ + NL +L +
Sbjct: 248 SLQTLHINRIWIESESCESLTKM-INLTELYISKNDFGNEGLKWISS-MKNLRVLDIGNH 305
Query: 362 QI----DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
I D A ++ + L +++IS +I GA+ L+ +
Sbjct: 306 SIIDALGDEAAKLVASLTQLTYLNISQHEITS----SGAKYLTSLTKLTTLFI------- 354
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
+ ++ D L +S+ KEL +L++ ++ + +S L +LT L I + V
Sbjct: 355 -DGNEICDDFLDSISSLKELTYLNISGGQISVKGVKSISKLPRLTILDISECV 406
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKEL-----DLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L++++C S L L M L L DL V+ K+L++++ LE ++
Sbjct: 400 LDISECVGCCSEVLKQLGLMKQLTSLHLSLTDLVESVEGFKYWHKNLINLTYLE---MNF 456
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
GL + I +S L NL LDL +TD ++ L + KLEYL L+G+ ++ + L+
Sbjct: 457 CGLDDNAIKWISGLPNLKYLDLQSNDLTDDCIQHLLGMKKLEYLSLFGNNMTEKKTKRLE 516
Query: 210 MFPR 213
+ +
Sbjct: 517 KYLK 520
>gi|430744264|ref|YP_007203393.1| hypothetical protein Sinac_3437 [Singulisphaera acidiphila DSM
18658]
gi|430015984|gb|AGA27698.1| hypothetical protein Sinac_3437 [Singulisphaera acidiphila DSM
18658]
Length = 329
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
+V+ S L L + L L L VTDAG++HL ++ L+KL+L +T +T G+A L
Sbjct: 77 KVSDSDLVVLEKLGKLTRLSLV-GTPVTDAGLEHLKGLTELKKLYLVDTKVTDAGLAHLK 135
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L+NL VL L G V D + SL+ L L+ L L GS+V++ G
Sbjct: 136 GLKNLEVLSLVGTQVGDAGVDSLKDLPNLQTLFLLGSKVTDEG 178
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
+++KA L G +++ + L+ VS+S L L ++ L L L
Sbjct: 42 DQDKAVADIQKLGGKVDRDDKAPGKPVTNVSLAITKVSDSDL---VVLEKLGKLTRLSLV 98
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ + D +E + + L+ L L +T+ + AG+ L G L NLE+LSL GTQ+ D +
Sbjct: 99 GTPVTDAGLEHLKGL-TELKKLYLVDTKVTDAGLAHLKG-LKNLEVLSLVGTQVGDAGVD 156
Query: 370 YMSMMPSLK 378
+ +P+L+
Sbjct: 157 SLKDLPNLQ 165
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
++L T+VSD+ L L +L LSL +TD L L L++L L + D +T++G
Sbjct: 71 VSLAITKVSDSDLVVLEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTKVTDAG 130
Query: 476 LGSFKPPRSLKLLDLHG 492
L K ++L++L L G
Sbjct: 131 LAHLKGLKNLEVLSLVG 147
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ +L L L+ L L G PVTD L L+ LT+L+ L L ++V++ G A LK L
Sbjct: 83 LVVLEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTKVTDAGLAHLKGLKNLEV 142
Query: 217 LNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKA---PLAKISLA 262
L+L T GV L ++ +L+ L L + EG + P +I LA
Sbjct: 143 LSLVGTQVGDAGVDSLKDLPNLQTLFLLGSKVTD--EGTKKAVEALPKTRIDLA 194
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
+++DLV+ L+ L L RL+L T V+DA L L EL L L + +TD L L
Sbjct: 79 SDSDLVV----LEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTKVTDAGLAHL 134
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 513
L L LS+ + ++G+ S K +L+ L L G +T++ + + P+ +
Sbjct: 135 KGLKNLEVLSLVGTQVGDAGVDSLKDLPNLQTLFLLGSK-VTDEGTKKAVEALPKTRI 191
>gi|423465200|ref|ZP_17441968.1| hypothetical protein IEK_02387, partial [Bacillus cereus BAG6O-1]
gi|402418961|gb|EJV51249.1| hypothetical protein IEK_02387, partial [Bacillus cereus BAG6O-1]
Length = 628
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|414586492|tpg|DAA37063.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 356
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV------- 128
+ + + L F L SL++ C VT+ A + L LDL RC K+
Sbjct: 170 DQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCPKINGGLIHL 229
Query: 129 -----------------TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
TD+ MK+L ++ L +L LS ++A G++ L L L L+L
Sbjct: 230 KGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNL 289
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
G VT + L + L L L+L + + G LK +L L+L + +T
Sbjct: 290 EGCAVTAVCLEVISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQIT 343
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
++SL C +++ L L+G + L L + +C VT G K ++ L L L
Sbjct: 161 MQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 152 LTADG-IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
G I L + + +TD ++ L LT L L L ++S G + L+
Sbjct: 221 KINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRG 280
Query: 211 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
+L LNL VT + ++SL LNLS C I EG EN L K+
Sbjct: 281 LHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKL 332
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL 159
C +T S + L+ +T L+EL LS C K++ G+ +L + L L L +TA + +
Sbjct: 243 CNGITDSDMKYLSDLTNLRELQLSSC-KISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEV 301
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+S L +L +L+L + D +L+ LTKL+ L L +Q+++
Sbjct: 302 ISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITD 344
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + M YL LR L ++ C ++++ + L G+ L L+L C VT ++
Sbjct: 244 NGITDSDMKYLSDLTNLRELQLSSC-KISAFGVSYLRGLHKLGHLNLEGCA-VTAVCLEV 301
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ +++L L LS G+ +G L L L L LG +TD L L+V+
Sbjct: 302 ISELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKVM 353
>gi|290974572|ref|XP_002670019.1| leucine-rich repeat protein [Naegleria gruberi]
gi|284083573|gb|EFC37275.1| leucine-rich repeat protein [Naegleria gruberi]
Length = 334
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
S+ + F+++MK L L +S + IGD+ V++++ + L +LN+SN R GV +++
Sbjct: 124 SIEKAKFISEMKQLTSLIISDNGIGDEGVKLISEL-KQLTSLNMSNNRIGDEGVKLIS-E 181
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L L L +S I + +S M L ++I+ ++G E + +
Sbjct: 182 LKQLTSLDISLNDIGAEGVKSISEMKQLTSLNIN-------YNRIGDE-----GVKLISE 229
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
L L LN+ + D + +S K+L L++ N + D + +S L +LT+L+I +
Sbjct: 230 LKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNN 289
Query: 470 VLTNSGLGSFKPPRSLKLLDLH 491
+ G S + L L ++
Sbjct: 290 RIGAEGAKSISEMKQLTSLSIN 311
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 53/249 (21%)
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L +S+ G+ +G+ L+S L+ L+ L++ + D ++ + L +L L
Sbjct: 129 KFISEMKQLTSLIISDNGIGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSL 188
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE 248
D+ + + G + +L+ LN+ + GV + + L LN+SN I
Sbjct: 189 DISLNDIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGI----- 243
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 308
G+E G I+E MK L L++
Sbjct: 244 GDE-----------GVKLISE------------------------------MKQLTSLNI 262
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
S++ IGD+ V+ ++ + L +LN+SN R + G ++ + L LS++ QI D +
Sbjct: 263 SNNGIGDEGVKSISEL-KQLTSLNISNNRIGAEGAKSIS-EMKQLTSLSINYNQIGDEGV 320
Query: 369 SYMSMMPSL 377
+S M L
Sbjct: 321 KSISDMKQL 329
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E + + + L SL+++ + + + +++ M L L+++ ++ D G+K
Sbjct: 169 NRIGDEGVKLISELKQLTSLDIS-LNDIGAEGVKSISEMKQLTSLNINYN-RIGDEGVKL 226
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S G+ +G+ L+S ++ L+ L++ + D ++S+ L +L L++
Sbjct: 227 ISELKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNI 286
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLN 237
+++ GA + +L+ L++ + GV + ++ L LN
Sbjct: 287 SNNRIGAEGAKSISEMKQLTSLSINYNQIGDEGVKSISDMKQLTSLN 333
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E ++ + L SL ++D + + ++ + L L++S ++ D G+K + +
Sbjct: 126 EKAKFISEMKQLTSLIISD-NGIGDEGVKLISELKQLTSLNMSNN-RIGDEGVKLISELK 183
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L +S + A+G+ +S ++ L+ L++ + D ++ + L +L L++ + +
Sbjct: 184 QLTSLDISLNDIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGI 243
Query: 201 SNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
+ G ++ +L+ LN++ GV + + L LN+SN I
Sbjct: 244 GDEGVKLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNNRI 291
>gi|167524527|ref|XP_001746599.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774869|gb|EDQ88495.1| predicted protein [Monosiga brevicollis MX1]
Length = 1226
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 105 SSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ 164
SS W L LD +R ++ + G L++ LE L +S +TA LLS L
Sbjct: 342 SSDTWPAQAELTLLALDYNR-IRYLEPGTFQRLTV--LEHLDISSNAITALPAGLLSDLS 398
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+L++L+L + + + Q LT L L W +Q+S+ A+L +L L L+ +
Sbjct: 399 SLTMLELQSNRIAAIDVHVFQDLTALTVLYAWQNQLSDLDPALLAPLSQLRILFLSTNRL 458
Query: 225 TKL-PNI----SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
L P+ + LE L L++C +D++ E L + + G+ + L+ TS
Sbjct: 459 RTLHPDTLAAQTRLEQLGLADCQLDALPENLVRSDRLQALYIRGSGVTALPHSLLFNTTS 518
Query: 280 LLSFLDVSN--SSLSRFCFLTQMKALEHLDLSSSMIGD---DSVEMVACVGANLRNLNLS 334
L S N +SL F + L+ LDL +S+I D ++ + +L+NL+L+
Sbjct: 519 LQSLYAAENRLASLPDGAFRGYAQLLD-LDLGNSLIADLEGQTIHLDLAASMSLQNLDLT 577
Query: 335 NTRFSSAGVGILAGHLPNLEILSLSG 360
R +S + L NL L++ G
Sbjct: 578 GMRLNSVTFSQIT-ELVNLTYLAMGG 602
>gi|422417931|ref|ZP_16494886.1| internalin-I [Listeria seeligeri FSL N1-067]
gi|313634795|gb|EFS01226.1| internalin-I [Listeria seeligeri FSL N1-067]
Length = 1687
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 175/401 (43%), Gaps = 64/401 (15%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L L + L+ L LS +TD + + + L+ + L G+T I L +L L
Sbjct: 370 LGTLENLPKLQTLILSGNENLTD--VDAINDLPQLKTVALDGCGIT--NIGTLENLPKLE 425
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT---GV 224
LD+ G VTD+ + L +L YLD +Q++ G L P L +LNL+ V
Sbjct: 426 KLDIKGNKVTDI--SEITDLPRLSYLDASENQLTTIG--TLAKLPLLDWLNLSENQLKDV 481
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+ + N SL +N+SN +I + G + P K G F + + + L L
Sbjct: 482 SAINNFPSLNYINVSNNSITTF--GKMTELPSLK-EFYGQ-FNKVTDISMIHDMPNLRKL 537
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIG--------------DDSVEMVACVGA---- 326
+VSN+ ++ + L++LD+ S+ I D S +++ +G
Sbjct: 538 NVSNNLINNLGTFENLPKLQNLDIHSNKITNTTVIHDFPSLETYDASSNLISTLGTMDNL 597
Query: 327 -NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
+ +NLS+ R S G LP L+ L ++ + + +P+L+ +++++
Sbjct: 598 PEVTTINLSSNRIPSLEP---IGDLPKLDTLLVNSNSSYLRTVGSLDGLPALQILELNS- 653
Query: 386 DIKGFIQQVGAETDL-------------------VLSLTALQNLNHLERLNLEQTQVSDA 426
+I G E L ++ L+ L +L +L L L+ ++ D
Sbjct: 654 ---NYINYSGKEATLSAFSDLTNLTELSMKDNYYIVDLSGLSSLTNLRYLYLDNNKIVDV 710
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
T PL EL L+L + D+S LSSL+KLTNL ++
Sbjct: 711 T--PLGNLTELRELTLGTNKIQDIS--ALSSLNKLTNLVVK 747
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 212/476 (44%), Gaps = 72/476 (15%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L GE +D +A + F+YL ++ D + + LT +T + L+LS +
Sbjct: 147 LNLSGETGIDETDIASIEGFQYLENVTSVDLSENNLTDITPLTDLTKIVTLNLSSNQNLE 206
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ--VL 187
D + + ++ L+ L +S AD I+ +++L L + G + L L + + L
Sbjct: 207 D--LNGVEGLTNLQDLNVSTCKSLAD-ISPVAALPALKEISAQGCNIQTLELENPEGDAL 263
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTI 243
+LE L + + + A L P+L L N + + L +S++ ++ SNCT
Sbjct: 264 PELETFYLQENDLQDLTA--LATLPKLKNLYIKGNSSLESLETLNGSTSIQLIDASNCTD 321
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L I L+G + + E T L + +++N + + C + + L
Sbjct: 322 METVGDISGITTLEMIQLSGCSKLKEI-------TDLKNLPNLTNITANN-CIIEDLGTL 373
Query: 304 EHLDLSSSMI--GDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
E+L ++I G++++ V + L+ + L ++ +G L +LP LE L +
Sbjct: 374 ENLPKLQTLILSGNENLTDVDAINDLPQLKTVALDGCGITN--IGTLE-NLPKLEKLDIK 430
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
G ++ D IS ++ +P L ++D A + + ++ L L L+ LNL
Sbjct: 431 GNKVTD--ISEITDLPRLSYLD--------------ASENQLTTIGTLAKLPLLDWLNLS 474
Query: 420 QTQVSDATL---FP-----------LSTFKELIHL-SLRN-----ASLTDVSL-HQLSSL 458
+ Q+ D + FP ++TF ++ L SL+ +TD+S+ H + +L
Sbjct: 475 ENQLKDVSAINNFPSLNYINVSNNSITTFGKMTELPSLKEFYGQFNKVTDISMIHDMPNL 534
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVW 514
K L++ + ++ N LG+F+ L+ LD+H + I F P +E +
Sbjct: 535 RK---LNVSNNLINN--LGTFENLPKLQNLDIHSNKITNTTVIHDF----PSLETY 581
>gi|170040460|ref|XP_001848016.1| leucine-rich transmembrane protein [Culex quinquefasciatus]
gi|167864100|gb|EDS27483.1| leucine-rich transmembrane protein [Culex quinquefasciatus]
Length = 1512
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 147/362 (40%), Gaps = 70/362 (19%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
LE+L+L LT+ L SL+ L LDL ++ L + + L +L+ L L +Q+
Sbjct: 626 LERLYLRNNTLTSIEYGALDSLRRLRYLDLSVNRLSTLNEQLFRSLAELDELHLGDNQIE 685
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKL------PNISSLECLNLSNCTIDSILEGNENKAP 255
N G V +L L+++ + L PN+S + +NL +C + I E N
Sbjct: 686 NLGPNVFSSLRKLRVLDISDNPLGTLQKDVFQPNLS-VSMINLKSCGLSRI-EAN----- 738
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
+ G +NE L +E + L DV +D+SS
Sbjct: 739 ----TFRGLQNLNE----LNLEDNRLRADDV-----------------RQIDVSS----- 768
Query: 316 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 375
LR L LS+ F+ +L LP+L+ L L I + + S
Sbjct: 769 ------------LRTLRLSSNNFTVIRENML-DRLPSLQNLVLDRCSIRELPATLFSKNN 815
Query: 376 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 435
+L +D+SN ++ L NLN + L L Q++D LS
Sbjct: 816 NLVKLDLSNNYLR------------TLKRNTFNNLNVFKELRLHNNQINDFPHVALSNVS 863
Query: 436 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLDLHGGW 494
L LSL LT V ++L L L +L RD +++ SG + P L ++DL G
Sbjct: 864 TLELLSLSKNQLTSVDFYKLHGLPNLRHLDFRDNTISSLSGFNTVTLPH-LDMIDLSGNL 922
Query: 495 LL 496
LL
Sbjct: 923 LL 924
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 171/422 (40%), Gaps = 45/422 (10%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+TS AL + L+ LDLS +++ + S++ L++L L + + G + SS
Sbjct: 636 LTSIEYGALDSLRRLRYLDLS-VNRLSTLNEQLFRSLAELDELHLGDNQIENLGPNVFSS 694
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+ L VLD+ P+ L Q + ++L +S A + L+ LNL
Sbjct: 695 LRKLRVLDISDNPLGTLQKDVFQPNLSVSMINLKSCGLSRIEANTFRGLQNLNELNLEDN 754
Query: 223 GV----TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
+ + ++SSL L LS+ I E ++ P + + I E A L+ +
Sbjct: 755 RLRADDVRQIDVSSLRTLRLSSNNFTVIRENMLDRLPSLQNLVLDRCSIRELPATLFSKN 814
Query: 279 SLLSFLDVSNS---SLSRFCFLTQMKALEHLDLSSSMIGD-------------------- 315
+ L LD+SN+ +L R F + + L L ++ I D
Sbjct: 815 NNLVKLDLSNNYLRTLKRNTF-NNLNVFKELRLHNNQINDFPHVALSNVSTLELLSLSKN 873
Query: 316 --DSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
SV+ G NLR+L+ + SS G LP+L+++ LSG + ++
Sbjct: 874 QLTSVDFYKLHGLPNLRHLDFRDNTISSLS-GFNTVTLPHLDMIDLSGNLLLALPQNFFK 932
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLV----LSLTALQNLNHLERLNLEQTQVSDATL 428
SL+ ID+S +E+ L L+LT N L+R++ T D
Sbjct: 933 HSISLQRIDLSCNRFNQIPNAALSESSLARLAWLNLTG----NPLQRIHHTMTAADDQH- 987
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
+ L L + +LT ++ L L + + G+F +L++L
Sbjct: 988 ---RKYPHLKELHISQTNLTILTSKDFEIYPALQRLYLIQNRINRVSPGAFVALSNLQIL 1044
Query: 489 DL 490
DL
Sbjct: 1045 DL 1046
>gi|343421695|emb|CCD18730.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 582
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 183/427 (42%), Gaps = 65/427 (15%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L LR LN+ V S +L+ L L++L+LS C ++ D + L I
Sbjct: 189 EGVQDLAELPNLRVLNLEKVN-VPSDSLFELCKSRSLEKLNLSSCKRLLD--VSPLSEIK 245
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
TL +L LS G++ L LQ L +L+L VTD L L LE L+L
Sbjct: 246 TLVELDLSLCCSLFTGVSELGKLQCLRILNLRNTAVTDHSLPGLSESDSLEILNLS---- 301
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
S RG T V+ L I SL L+LSNC ++ +G
Sbjct: 302 SCRG----------------LTNVSPLKEIKSLVQLDLSNCP--ALRDG----------- 332
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
I A ++ T L ++N SL C + ++LE LD SS D +
Sbjct: 333 ------IGSLVALPFLCTLKLRNTAITNESLRDIC---ESESLEELDASSCTALSDVFHI 383
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
V L LNLS G+ +A LP L L +SGT I ++ + + SL+ +
Sbjct: 384 S--VLNTLVELNLSFCPNLVKGMEAIAS-LPFLRALDISGTPITNHCLRGLRKSNSLETV 440
Query: 381 DISN----TDIKGFIQ-------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
+ + TD+ + +G L + L L L LNLE T+ ++ +
Sbjct: 441 SLRSCNNLTDVFYLSKISTLLRLDLGCCISLQKGVGTLGKLPRLRILNLEGTRAANDWII 500
Query: 430 PLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS-FKPP--RSL 485
LST + L L L + +L+DVSL L+++ L L I + V SG + K P R L
Sbjct: 501 GLSTSRSLAVLILSSCLALSDVSL--LANIEPLEELDISNCVSIRSGAEALLKLPQIRVL 558
Query: 486 KLLDLHG 492
K+ D++
Sbjct: 559 KMYDVNA 565
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 143/325 (44%), Gaps = 37/325 (11%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+V ++ + L R L LN++ C+R+ + L+ + L ELDLS C + G+ L
Sbjct: 209 NVPSDSLFELCKSRSLEKLNLSSCKRLLDVS--PLSEIKTLVELDLSLCCSLF-TGVSEL 265
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL 195
+ L L L T +T + LS +L +L+L +T++ L+ + L LDL
Sbjct: 266 GKLQCLRILNLRNTAVTDHSLPGLSESDSLEILNLSSCRGLTNV--SPLKEIKSLVQLDL 323
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNI---SSLECLNLSNCT-------- 242
G L P L L L T +T L +I SLE L+ S+CT
Sbjct: 324 SNCPALRDGIGSLVALPFLCTLKLRNTAITNESLRDICESESLEELDASSCTALSDVFHI 383
Query: 243 --IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LT 298
+++++E N + P + EA + L LD+S + ++ C L
Sbjct: 384 SVLNTLVELNLSFCP---------NLVKGMEAIASL--PFLRALDISGTPITNHCLRGLR 432
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
+ +LE + L S D V ++ + LR L+L GVG L G LP L IL+L
Sbjct: 433 KSNSLETVSLRSCNNLTD-VFYLSKISTLLR-LDLGCCISLQKGVGTL-GKLPRLRILNL 489
Query: 359 SGTQIDDYAISYMSMMPSLKFIDIS 383
GT+ + I +S SL + +S
Sbjct: 490 EGTRAANDWIIGLSTSRSLAVLILS 514
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 48/254 (18%)
Query: 318 VEMVACVG-------ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+E++ C G ANL +L + + R S V G L NL L LSGT++ D
Sbjct: 87 IEIIMCKGIFDLSILANLGSLEVLSVRGSRVHVTGSIGGLKNLRELDLSGTRVQDEVFYE 146
Query: 371 MSMMPSLKFIDISN----------TDIKGFIQ-QVGAETDLVLSLTALQNLNHLERLNLE 419
+S P+L +++ DI+ + +G + + L L +L LNLE
Sbjct: 147 LSENPNLTKVNLRQCQGLSDVSPLADIESLQELDLGLCRSINEGVQDLAELPNLRVLNLE 206
Query: 420 QTQVSDATLF-----------------------PLSTFKELIHLSLRNASLTDVSLHQLS 456
+ V +LF PLS K L+ L L + +L
Sbjct: 207 KVNVPSDSLFELCKSRSLEKLNLSSCKRLLDVSPLSEIKTLVELDLSLCCSLFTGVSELG 266
Query: 457 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHE 516
L L L++R+ +T+ L SL++L+L LT + L+ K ++++ +
Sbjct: 267 KLQCLRILNLRNTAVTDHSLPGLSESDSLEILNLSSCRGLTNVSPLKEIKSLVQLDLSN- 325
Query: 517 LSVICPS--DQIGS 528
CP+ D IGS
Sbjct: 326 ----CPALRDGIGS 335
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 165/384 (42%), Gaps = 66/384 (17%)
Query: 160 LSSLQNLSVLDLGGLPVTDLV--------------LRSLQVLT---------KLEYLDLW 196
+ L+NL LDL G V D V LR Q L+ L+ LDL
Sbjct: 123 IGGLKNLRELDLSGTRVQDEVFYELSENPNLTKVNLRQCQGLSDVSPLADIESLQELDLG 182
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNE 251
+ N G L P L LNL V +L SLE LNLS+C +L+
Sbjct: 183 LCRSINEGVQDLAELPNLRVLNLEKVNVPSDSLFELCKSRSLEKLNLSSCK--RLLD--- 237
Query: 252 NKAPLAKI--------SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMK 301
+PL++I SL + F E + L L++ N++++ L++
Sbjct: 238 -VSPLSEIKTLVELDLSLCCSLFTGVSELG---KLQCLRILNLRNTAVTDHSLPGLSESD 293
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
+LE L+LSS G +V + + + L L+LSN G+G L LP L L L T
Sbjct: 294 SLEILNLSSCR-GLTNVSPLKEIKS-LVQLDLSNCPALRDGIGSLVA-LPFLCTLKLRNT 350
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET-----------DLVLSLTALQNL 410
I + ++ + SL+ +D S+ + + +LV + A+ +L
Sbjct: 351 AITNESLRDICESESLEELDASSCTALSDVFHISVLNTLVELNLSFCPNLVKGMEAIASL 410
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA 469
L L++ T +++ L L L +SLR+ +LTDV LS +S L L +
Sbjct: 411 PFLRALDISGTPITNHCLRGLRKSNSLETVSLRSCNNLTDV--FYLSKISTLLRLDLGCC 468
Query: 470 VLTNSGLGSF-KPPRSLKLLDLHG 492
+ G+G+ K PR L++L+L G
Sbjct: 469 ISLQKGVGTLGKLPR-LRILNLEG 491
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 161/363 (44%), Gaps = 31/363 (8%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+++L++L +L VL + G V V S+ L L LDL G++V + L P L+
Sbjct: 98 LSILANLGSLEVLSVRGSRVH--VTGSIGGLKNLRELDLSGTRVQDEVFYELSENPNLTK 155
Query: 217 LNL----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 272
+NL + V+ L +I SL+ L+L C SI EG ++ A L + + +N
Sbjct: 156 VNLRQCQGLSDVSPLADIESLQELDLGLCR--SINEGVQDLAELPNLRVLNLEKVNVPSD 213
Query: 273 FLYIETSLLSFLDVSNSSLSRF---CFLTQMKALEHLDLS---SSMIGDDSVEMVACVGA 326
L+ S ++ SS R L+++K L LDLS S G + + C
Sbjct: 214 SLFELCKSRSLEKLNLSSCKRLLDVSPLSEIKTLVELDLSLCCSLFTGVSELGKLQC--- 270
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT- 385
LR LNL NT + + L+ +LEIL+LS + +S + + SL +D+SN
Sbjct: 271 -LRILNLRNTAVTDHSLPGLSES-DSLEILNLSSCR-GLTNVSPLKEIKSLVQLDLSNCP 327
Query: 386 ---DIKGFIQQVGAETDLVLSLTALQN---LNHLERLNLEQTQVSDAT----LFPLSTFK 435
D G + + L L TA+ N + E +LE+ S T +F +S
Sbjct: 328 ALRDGIGSLVALPFLCTLKLRNTAITNESLRDICESESLEELDASSCTALSDVFHISVLN 387
Query: 436 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
L+ L+L + ++SL L L I +TN L + SL+ + L
Sbjct: 388 TLVELNLSFCPNLVKGMEAIASLPFLRALDISGTPITNHCLRGLRKSNSLETVSLRSCNN 447
Query: 496 LTE 498
LT+
Sbjct: 448 LTD 450
>gi|290980573|ref|XP_002673006.1| predicted protein [Naegleria gruberi]
gi|284086587|gb|EFC40262.1| predicted protein [Naegleria gruberi]
Length = 361
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 281 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
L+ LDVS + + +LTQ+ L L + ++ I DD ++M++ + L L+LSN R
Sbjct: 140 LTILDVSYNDIGYGGVKWLTQLSQLTELRIGNNSIFDDDIKMISEM-KQLTKLDLSNCRI 198
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
GV L+ L NL L L G ++ D + +S + L + I Q+G E
Sbjct: 199 MD-GVQYLS-KLENLTSLRLCGNRLTDERVESISNLKQLTELYIGEN-------QLGTE- 248
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
++ N+ L RLN++Q ++S + L L L++ + D + +S +
Sbjct: 249 ----GAKSIGNMTQLTRLNIQQNRISQGVKY-LEKLDRLTDLNISKNKIGDTGVIIISEM 303
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
++LT L+IRD ++ G + + L LD+
Sbjct: 304 NQLTKLTIRDNKISEEGAKTLGLLQKLTYLDI 335
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 17/230 (7%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+G+ + L L+V+ W LT ++ L EL + + D +K + + L KL
Sbjct: 134 IGSLKQLTILDVSYNDIGYGGVKW-LTQLSQLTELRIGNN-SIFDDDIKMISEMKQLTKL 191
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
LS + DG+ LS L+NL+ L L G +TD + S+ L +L L + +Q+ GA
Sbjct: 192 DLSNCRI-MDGVQYLSKLENLTSLRLCGNRLTDERVESISNLKQLTELYIGENQLGTEGA 250
Query: 206 AVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTIDS-----ILEGNENKAPL 256
+ +L+ LN+ GV L + L LN+S I I E N+ L
Sbjct: 251 KSIGNMTQLTRLNIQQNRISQGVKYLEKLDRLTDLNISKNKIGDTGVIIISEMNQ----L 306
Query: 257 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
K+++ I+E A L++LD+S++S+S + K ++ L
Sbjct: 307 TKLTIRDNK-ISEEGAKTLGLLQKLTYLDISDNSVSNVTANSMQKNMKSL 355
>gi|334145937|ref|YP_004508864.1| leucine-rich protein [Porphyromonas gingivalis TDC60]
gi|333803091|dbj|BAK24298.1| leucine-rich protein [Porphyromonas gingivalis TDC60]
Length = 1384
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 198/430 (46%), Gaps = 38/430 (8%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L +L SL D R + L L +T L L+LS G+ S+++L
Sbjct: 187 IAKLEGLDHLTSLTRLDLRGNQIAKLEGLDHLTSLTGLNLSGNQIRKLEGLD---SLTSL 243
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+L+LS G + L++L +L+ L L G + L L LT L L+L G+Q+S
Sbjct: 244 TELYLS--GNQIAKLEGLNALTSLTELYLSGNQIAKL--EGLNALTSLTGLNLSGNQISK 299
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNLSNCTIDSILEGNENKAPLAKI 259
+ L L+ LNL+ + KL + +SL L+L I + LEG ++ L ++
Sbjct: 300 LES--LASLTSLTRLNLSDNQIAKLEGLNALTSLTGLDLRGNQI-AKLEGLDHLTSLTRL 356
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
L G I + E + + L+ LD+S + +S+ L + +L LDLS + I ++E
Sbjct: 357 DLRGNQ-IRKLEGLDSLTS--LTQLDLSGNQISKLESLNALTSLTELDLSDNQIA--TLE 411
Query: 320 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 379
+A + +L L+LS+ + + G+ A L +L L L G QI + + + SL
Sbjct: 412 SLASL-TSLTELDLSDNQIAKLE-GLNA--LTSLTGLDLRGNQI--AKLEGLDHLTSLTR 465
Query: 380 IDISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
+D+ I+ + Q+ + + L +L L L L+L Q+ ATL L
Sbjct: 466 LDLRGNQIRKLEGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQI--ATLEGL 523
Query: 432 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
+ L L L + + L L+SL+ LT L + D + + L K L+ LD+
Sbjct: 524 NALTSLTRLDLSDNQI--AKLESLASLTSLTRLDLSDNQI--AKLEGLKDLTQLQELDVS 579
Query: 492 GGWLLTEDAI 501
G + + D I
Sbjct: 580 GNDIQSVDDI 589
>gi|390341015|ref|XP_003725354.1| PREDICTED: protein slit-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 1012
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 175/418 (41%), Gaps = 51/418 (12%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV-----KVTDAGMKHLLSISTLE 143
FR R + D ++ + LW++ C + LD + + +V + +S L
Sbjct: 216 FRNNRQIERLD---LSDNILWSI-AEDCFQPLDALKFLNLSYNRVNEKNQMIFTGLSQLT 271
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
+L+L T L S L +DL + + + Q LE+LDL G+ ++
Sbjct: 272 ELYLQRNKFTRIDPTLFLSNTQLKKIDLSFNRIKTIAPNAFQNQRLLEFLDLSGNSLT-- 329
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLA 262
S +LA+ G ++L L+LS+ +++ I++ N A L K++L
Sbjct: 330 -----------SLNSLAFQGA------NALRTLDLSSNSVNEIMDDVFTNLANLTKLNLK 372
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEM 320
G N A + + LS+L ++++++SR L + LE LDLS + + ++
Sbjct: 373 GNMLPNI-TADTFGDIPSLSYLTLTDNNISRISSNSLAGLVGLEFLDLSGNSLR--HLQA 429
Query: 321 VACVG-ANLRNLNLSNTRFSSAGVGILA----GHLPNLEILSLSGTQIDDYAISYMSMMP 375
A G A L LNL++ + L + L L+L G Q+ + P
Sbjct: 430 GALQGLAALMELNLADNKLYIVEPEALKTTQFSFMSQLTWLNLQGNQLIELQRGVFRGAP 489
Query: 376 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 435
SL+ + +S I L + A N L RL + + +
Sbjct: 490 SLRVLTLSRNKI------------LRIVPDAFSGFNRLHRLMMSDNNLRRLPDGIFRLLR 537
Query: 436 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
L L LRN SLT++S L+ L+NL++ + LTN + K R ++ L+L+
Sbjct: 538 TLEMLDLRNNSLTEISDKAFQGLTALSNLNLAENKLTNDKMKWLKNIRPVQTLNLNNN 595
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 188/473 (39%), Gaps = 79/473 (16%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADC--RRVTSSALWALTGMT 115
SLLE N IE R + S + W F+ L +L + RV TG++
Sbjct: 210 SLLESIFRNNRQIE-RLDLSDNILWSIAEDCFQPLDALKFLNLSYNRVNEKNQMIFTGLS 268
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L EL L R K T LS + L+K+ LS + + + L LDL G
Sbjct: 269 QLTELYLQRN-KFTRIDPTLFLSNTQLKKIDLSFNRIKTIAPNAFQNQRLLEFLDLSGNS 327
Query: 176 VTDL---------VLRSLQV---------------LTKLEYLDLWGSQVSNRGAAVLKMF 211
+T L LR+L + L L L+L G+ + N A
Sbjct: 328 LTSLNSLAFQGANALRTLDLSSNSVNEIMDDVFTNLANLTKLNLKGNMLPNITADTFGDI 387
Query: 212 PRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTT 265
P LS+L L +++ L + LE L+LS ++ + G + A L +++LA
Sbjct: 388 PSLSYLTLTDNNISRISSNSLAGLVGLEFLDLSGNSLRHLQAGALQGLAALMELNLADNK 447
Query: 266 -FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+I E EA ++F F++Q+ L ++ G+ +E+ V
Sbjct: 448 LYIVEPEAL----------------KTTQFSFMSQLTWL-------NLQGNQLIELQRGV 484
Query: 325 ---GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 381
+LR L LS + +G L L +S + ++ +L+ +D
Sbjct: 485 FRGAPSLRVLTLSRNKILRIVPDAFSG-FNRLHRLMMSDNNLRRLPDGIFRLLRTLEMLD 543
Query: 382 ISNTDI-----KGFIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATL 428
+ N + K F Q + A ++L L+ + L+N+ ++ LNL Q S +
Sbjct: 544 LRNNSLTEISDKAF-QGLTALSNLNLAENKLTNDKMKWLKNIRPVQTLNLNNNQFSQMSS 602
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 481
L +L L N +LT VS+ S L L NL++ + LT L F P
Sbjct: 603 GDFEVAGNLRYLYLSNNNLTKVSVRNDSRL-YLYNLTLSNNRLTE--LMDFSP 652
>gi|434405931|ref|YP_007148816.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260186|gb|AFZ26136.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 451
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 175/371 (47%), Gaps = 64/371 (17%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ + L +L D + S + L+ +T L LDLS +++D +K L +++ L
Sbjct: 127 ISDIKVLSNLTNLTDIDLSKNQISDIKVLSNLTNLTVLDLSDN-QISD--IKVLSNLTNL 183
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+ LSE ++ I +LS+L NL+VLDLG ++D ++ L LT L YL LW +Q+
Sbjct: 184 TSVKLSENQIS--DIEVLSNLTNLTVLDLGYNQISD--IKVLSNLTNLTYLSLWNNQIG- 238
Query: 203 RGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
VL L+ L+L W + + L N+++L L L + I I PL+
Sbjct: 239 -DIKVLSNLTNLTSLSL-WDNQISDIKPLSNLTNLTSLYLWDNQISDI-------KPLSN 289
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 318
++ +LY+ ++ ++ L+ + L LDLS + IGD +
Sbjct: 290 LT---------NLTYLYLW----------DNQIADIKPLSNLTNLTDLDLSKNQIGD--I 328
Query: 319 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 378
+ ++ + + L +L+LS + A + L+ +L NL LSL Q D I +S + +L
Sbjct: 329 KPLSNLTS-LTSLDLSKNQI--ADIKPLS-NLTNLTSLSLWRNQSID--IELLSNLTNLT 382
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
+D+S I + L NL +L ++L + Q+SD + PLS +L
Sbjct: 383 SLDLSENQISD--------------IKPLSNLTNLTDIDLSENQISD--IKPLSNLTKLE 426
Query: 439 HLSLRNASLTD 449
L ++N + D
Sbjct: 427 DLQIQNNPILD 437
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 43/362 (11%)
Query: 156 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
I LS+L NL+ LDL ++D+ + L LT L +DL +Q+S VL L+
Sbjct: 85 DIKPLSNLTNLTTLDLSENQISDI--KPLSNLTNLTDIDLSSNQIS--DIKVLSNLTNLT 140
Query: 216 FLNLAWTGVTK---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 272
++L+ ++ L N+++L L+LS+ I I + N L + L+ I++ E
Sbjct: 141 DIDLSKNQISDIKVLSNLTNLTVLDLSDNQISDI-KVLSNLTNLTSVKLSENQ-ISDIEV 198
Query: 273 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 332
+ L+ LD+ + +S L+ + L +L L ++ IGD +++++ + NL +L+
Sbjct: 199 LSNLTN--LTVLDLGYNQISDIKVLSNLTNLTYLSLWNNQIGD--IKVLSNL-TNLTSLS 253
Query: 333 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY-AISYMSMMPSLKFIDISNTDIKGFI 391
L + + S +L NL L L QI D +S ++ + L D DIK
Sbjct: 254 LWDNQISDIKP---LSNLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWDNQIADIKPL- 309
Query: 392 QQVGAETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RN 444
+ TDL LS + L NL L L+L + Q++D + PLS L LSL RN
Sbjct: 310 SNLTNLTDLDLSKNQIGDIKPLSNLTSLTSLDLSKNQIAD--IKPLSNLTNLTSLSLWRN 367
Query: 445 ASLT-------------DVSLHQLSSLSKLTNLS-IRDAVLTNSGLGSFKPPRSL-KLLD 489
S+ D+S +Q+S + L+NL+ + D L+ + + KP +L KL D
Sbjct: 368 QSIDIELLSNLTNLTSLDLSENQISDIKPLSNLTNLTDIDLSENQISDIKPLSNLTKLED 427
Query: 490 LH 491
L
Sbjct: 428 LQ 429
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S + L+ +T L LDLS +++D +K L +++ L + LS ++ I +LS+L N
Sbjct: 84 SDIKPLSNLTNLTTLDLSEN-QISD--IKPLSNLTNLTDIDLSSNQIS--DIKVLSNLTN 138
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L+ +DL ++D ++ L LT L LDL +Q+S VL L+ + L+
Sbjct: 139 LTDIDLSKNQISD--IKVLSNLTNLTVLDLSDNQIS--DIKVLSNLTNLTSVKLSENQ-- 192
Query: 226 KLPNISSLECL-NLSNCTIDSILEGNENKAPLAKI--SLAGTTFI---NEREAFLYIETS 279
IS +E L NL+N T +L+ N+ K+ +L T++ N + + + ++
Sbjct: 193 ----ISDIEVLSNLTNLT---VLDLGYNQISDIKVLSNLTNLTYLSLWNNQIGDIKVLSN 245
Query: 280 LLSFLDVSNSSLSRF-CFLTQMKALEHL-DLSSSMIGDDSVEMVACVG--ANLRNLNLSN 335
L + +SLS + ++ +K L +L +L+S + D+ + + + NL L L +
Sbjct: 246 LTNL-----TSLSLWDNQISDIKPLSNLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWD 300
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
+ A + L+ +L NL L LS QI D I +S + SL +D+S I I+ +
Sbjct: 301 NQI--ADIKPLS-NLTNLTDLDLSKNQIGD--IKPLSNLTSLTSLDLSKNQIAD-IKPLS 354
Query: 396 AETDLV---------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
T+L + + L NL +L L+L + Q+SD + PLS L + L
Sbjct: 355 NLTNLTSLSLWRNQSIDIELLSNLTNLTSLDLSENQISD--IKPLSNLTNLTDIDLSENQ 412
Query: 447 LTDVSLHQLSSLSKLTNLSIRD 468
++D+ LS+L+KL +L I++
Sbjct: 413 ISDI--KPLSNLTKLEDLQIQN 432
>gi|390341017|ref|XP_003725355.1| PREDICTED: protein slit-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 1012
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 175/418 (41%), Gaps = 51/418 (12%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV-----KVTDAGMKHLLSISTLE 143
FR R + D ++ + LW++ C + LD + + +V + +S L
Sbjct: 216 FRNNRQIERLD---LSDNILWSI-AEDCFQPLDALKFLNLSYNRVNEKNQMIFTGLSQLT 271
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
+L+L T L S L +DL + + + Q LE+LDL G+ ++
Sbjct: 272 ELYLQRNKFTRIDPTLFLSNTQLKKIDLSFNRIKTIAPNAFQNQRLLEFLDLSGNSLT-- 329
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLA 262
S +LA+ G ++L L+LS+ +++ I++ N A L K++L
Sbjct: 330 -----------SLNSLAFQGA------NALRTLDLSSNSVNEIMDDVFTNLANLTKLNLK 372
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEM 320
G N A + + LS+L ++++++SR L + LE LDLS + + ++
Sbjct: 373 GNMLPNI-TADTFGDIPSLSYLTLTDNNISRISSNSLAGLVGLEFLDLSGNSLR--HLQA 429
Query: 321 VACVG-ANLRNLNLSNTRFSSAGVGILA----GHLPNLEILSLSGTQIDDYAISYMSMMP 375
A G A L LNL++ + L + L L+L G Q+ + P
Sbjct: 430 GALQGLAALMELNLADNKLYIVEPEALKTTQFSFMSQLTWLNLQGNQLIELQRGVFRGAP 489
Query: 376 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 435
SL+ + +S I L + A N L RL + + +
Sbjct: 490 SLRVLTLSRNKI------------LRIVPDAFSGFNRLHRLMMSDNNLRRLPDGIFRLLR 537
Query: 436 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
L L LRN SLT++S L+ L+NL++ + LTN + K R ++ L+L+
Sbjct: 538 TLEMLDLRNNSLTEISDKAFQGLTALSNLNLAENKLTNDKMKWLKNIRPVQTLNLNNN 595
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 195/488 (39%), Gaps = 84/488 (17%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADC--RRVTSSALWALTGMT 115
SLLE N IE R + S + W F+ L +L + RV TG++
Sbjct: 210 SLLESIFRNNRQIE-RLDLSDNILWSIAEDCFQPLDALKFLNLSYNRVNEKNQMIFTGLS 268
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L EL L R K T LS + L+K+ LS + + + L LDL G
Sbjct: 269 QLTELYLQRN-KFTRIDPTLFLSNTQLKKIDLSFNRIKTIAPNAFQNQRLLEFLDLSGNS 327
Query: 176 VTDL---------VLRSLQV---------------LTKLEYLDLWGSQVSNRGAAVLKMF 211
+T L LR+L + L L L+L G+ + N A
Sbjct: 328 LTSLNSLAFQGANALRTLDLSSNSVNEIMDDVFTNLANLTKLNLKGNMLPNITADTFGDI 387
Query: 212 PRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTT 265
P LS+L L +++ L + LE L+LS ++ + G + A L +++LA
Sbjct: 388 PSLSYLTLTDNNISRISSNSLAGLVGLEFLDLSGNSLRHLQAGALQGLAALMELNLADNK 447
Query: 266 -FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+I E EA ++F F++Q+ L ++ G+ +E+ V
Sbjct: 448 LYIVEPEAL----------------KTTQFSFMSQLTWL-------NLQGNQLIELQRGV 484
Query: 325 ---GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 381
+LR L LS + +G L L +S + ++ +L+ +D
Sbjct: 485 FRGAPSLRVLTLSRNKILRIVPDAFSG-FNRLHRLMMSDNNLRRLPDGIFRLLRTLEMLD 543
Query: 382 ISNTDI-----KGFIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATL 428
+ N + K F Q + A ++L L+ + L+N+ ++ LNL Q S +
Sbjct: 544 LRNNSLTEISDKAF-QGLTALSNLNLAENKLTNDKMKWLKNIRPVQTLNLNNNQFSQMSS 602
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP---PRSL 485
L +L L N +LT VS+ S L L NL++ + LT L F P P
Sbjct: 603 GDFEVAGNLRYLYLSNNNLTKVSVRNDSRL-YLYNLTLSNNRLTE--LMDFSPHILPG-- 657
Query: 486 KLLDLHGG 493
++LDL G
Sbjct: 658 RVLDLAGN 665
>gi|330506767|ref|YP_004383195.1| internalin-A [Methanosaeta concilii GP6]
gi|328927575|gb|AEB67377.1| internalin-A, putative [Methanosaeta concilii GP6]
Length = 567
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 187/402 (46%), Gaps = 93/402 (23%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L+G+T L +LDLS ++TDA L ++ L L L +T ++ LS L NL L
Sbjct: 161 SLSGLTNLTDLDLSTN-QITDA--SPLSGLTNLTDLDLDNNQIT--DVSSLSGLINLMNL 215
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--L 227
DL +T++ SL LT + +LDLWG+Q+++ + L NL W V++ +
Sbjct: 216 DLSSNRITNV---SLSGLTNVVWLDLWGNQITDVTLSGLT--------NLTWLDVSRNQI 264
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
++SSL L L K+ L G I + + + L+ LD+S
Sbjct: 265 ADVSSLSGL-----------------TNLTKLYL-GCNQITDVSSLSGLTN--LTDLDLS 304
Query: 288 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
+ ++ L+ + L +LDL ++ I D S+ + NL +L LSN + + V L+
Sbjct: 305 TNQITDASPLSGLTNLTYLDLDNNRINDVSLSDLT----NLTDLELSNNQIND--VSSLS 358
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET----DL--- 400
G L NL+ L LS QI+D IS +S + +L +++S+ +I + DL
Sbjct: 359 G-LTNLKDLDLSNNQIND--ISSLSGLTNLTDLELSSNEITNISSLSSLASLRCLDLDNN 415
Query: 401 ----VLSLTALQNL-------NH------------LERLNLEQTQVSDATLFPLSTFKEL 437
V SL+AL +L NH L L+L Q++D + PLS L
Sbjct: 416 QIIDVSSLSALTSLKWLRLCSNHATDASSLSSLVNLRWLDLSSNQITDVS--PLSGLYNL 473
Query: 438 IHLSLRNASLTDVS--------------LHQLSSLSKLTNLS 465
L+L + +TDVS +Q++ +S L+NL+
Sbjct: 474 GWLNLSSNQITDVSPLSGLANLTGLDLSSNQITDVSPLSNLT 515
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 167/372 (44%), Gaps = 84/372 (22%)
Query: 126 VKVTDAGMKHLLSISTLEK-LWLSETGLTADGIALLSSLQNLSVL---DLGGLPVTDLVL 181
+K+ +A M + I+ LE+ + L L + I+ SSL L+ L +L +TD+
Sbjct: 60 IKLLNADMSSIKDITGLERCINLENLSLRENEISDASSLSGLTGLKRLELSSNQITDV-- 117
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 241
SL L LE L LW + ++N + L L L W K+ N+SSL L
Sbjct: 118 -SLSGLANLETLSLWDNHITNVSLSGLTNLDTL----LLWGN--KIINVSSLSGL----- 165
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+ L+ LD+S + ++ L+ +
Sbjct: 166 -------------------------------------TNLTDLDLSTNQITDASPLSGLT 188
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
L LDL ++ I D V+ + NL NL+LS+ R ++ L+G L N+ L L
Sbjct: 189 NLTDLDLDNNQITD-----VSSLSGLINLMNLDLSSNRITNVS---LSG-LTNVVWLDLW 239
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL---------VLSLTALQNL 410
G QI D +S ++ +L ++D+S I + + T+L + +++L L
Sbjct: 240 GNQITDVTLSGLT---NLTWLDVSRNQIAD-VSSLSGLTNLTKLYLGCNQITDVSSLSGL 295
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS--KLTNLSIRD 468
+L L+L Q++DA+ PLS L +L L N + DVSL L++L+ +L+N I D
Sbjct: 296 TNLTDLDLSTNQITDAS--PLSGLTNLTYLDLDNNRINDVSLSDLTNLTDLELSNNQIND 353
Query: 469 AVLTNSGLGSFK 480
V + SGL + K
Sbjct: 354 -VSSLSGLTNLK 364
>gi|290981666|ref|XP_002673551.1| predicted protein [Naegleria gruberi]
gi|284087135|gb|EFC40807.1| predicted protein [Naegleria gruberi]
Length = 438
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 179/451 (39%), Gaps = 89/451 (19%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALW----ALTGMTCLKELDLS- 123
+IE+ G N + E + YL ++C+ +TS+ L+ + G + L +L L+
Sbjct: 36 SIEI-GYNRIGNEGVKYL-----------SECKELTSANLYGNNISAEGASYLTKLKLTN 83
Query: 124 ---RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV 180
R ++ G K + +S L+ L + + A+G L +L L+ L + + +
Sbjct: 84 LDIRTNELGAEGAKFIGQLSQLKILNIGVNDICAEGAKYLVALNQLTNLGINCNRIGEEG 143
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLEC 235
+S+ + +L LD+ + + G + L+ L NL G K+ + L
Sbjct: 144 AKSISEMKQLTNLDISNNYIGETGVEYVSEMGNLTTLTIIENNLRAEGCKKIRKLKQLTR 203
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
L++ + KI G FI+E E + FL+++N+S+
Sbjct: 204 LSIYD----------------NKIGAEGAKFISEMEQLM--------FLEINNNSIRNEG 239
Query: 296 --FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
+++Q+ L LD+S + IG + + ++ L
Sbjct: 240 TEYISQLGNLTELDISHNEIGSEGAKHIS--------------------------QFKQL 273
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
L S +I+ + Y+S + L TD++ +G + S+ ++ NL L
Sbjct: 274 TCLRFSYNKINAESFEYLSTLTQL-------TDLRICSSSIGDD-----SIKSITNLKSL 321
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
L L +SD +S +L LS+ +++D LS L++LT L + + N
Sbjct: 322 TILYLNGNNISDNGCKNISELTQLTDLSMALNNISDEGCKFLSQLTQLTELDVSYNRIGN 381
Query: 474 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
G + LK L + + E I Q
Sbjct: 382 IGAEYINEMKQLKHLAIQANNIRNESKIDQL 412
>gi|291230586|ref|XP_002735244.1| PREDICTED: partner of paired-like [Saccoglossus kowalevskii]
Length = 396
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 52/334 (15%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH----------LLSI 139
R +R + + +R SS + GM L+ L+LS C +TD G+ H +L++
Sbjct: 70 RGIRRVQILSLKRSLSSVV---QGMHNLQSLNLSGCYNLTDVGLAHAFVREMPSLTVLNL 126
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDLW 196
S +++ S G A L+NL LDLGG + T L+L + LTKL YL+L
Sbjct: 127 SLCKQITDSSLGRIAQ------YLRNLEHLDLGGCCNITNTGLLLIAWG-LTKLRYLNLR 179
Query: 197 GSQ-VSNRGAAVLKMFPR------LSFLNLAWTGVTKLPNIS---------SLECLNLSN 240
+ VS+ G A L + L +L KL +++ LE LNLS
Sbjct: 180 SCRHVSDSGIAHLAGLTKNDAGGTLFLQHLVLQDCQKLTDLALLNAARGLVKLESLNLSF 239
Query: 241 C--TIDSILEGNENKAPLAKISLAGTTFINE------REAFLYIETSLLSFLD-VSNSSL 291
C DS + L +++L I++ E Y+ T +SF D V ++SL
Sbjct: 240 CGGITDSGMVHLSRMPSLKELNLRSCDNISDIGIAHLAEGGAYLRTLDVSFCDKVGDASL 299
Query: 292 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHL 350
+ M +L + LSS I DD + + +L+ LN+ +R + G+G++A +L
Sbjct: 300 THIA--QGMYSLMSISLSSCPITDDGMARLVRTLRDLKTLNIGQCSRITDEGLGLIATNL 357
Query: 351 PNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + + +P L +++
Sbjct: 358 RKLSCIDLYGCTKITTVGLEKIMQLPCLSVLNLG 391
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 57/191 (29%)
Query: 87 GAFRYLRSLNVADCRRVTSSALW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G +L+ L + DC+++T AL A G+ L+ L+LS C +TD+GM HL + +L++L
Sbjct: 201 GGTLFLQHLVLQDCQKLTDLALLNAARGLVKLESLNLSFCGGITDSGMVHLSRMPSLKEL 260
Query: 146 WL------SETGLT--ADGIALLSSLQ--------------------NLSVLDLGGLPVT 177
L S+ G+ A+G A L +L +L + L P+T
Sbjct: 261 NLRSCDNISDIGIAHLAEGGAYLRTLDVSFCDKVGDASLTHIAQGMYSLMSISLSSCPIT 320
Query: 178 D-------LVLRSLQVLT--------------------KLEYLDLWG-SQVSNRGAAVLK 209
D LR L+ L KL +DL+G ++++ G +
Sbjct: 321 DDGMARLVRTLRDLKTLNIGQCSRITDEGLGLIATNLRKLSCIDLYGCTKITTVGLEKIM 380
Query: 210 MFPRLSFLNLA 220
P LS LNL
Sbjct: 381 QLPCLSVLNLG 391
>gi|290977929|ref|XP_002671689.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284085260|gb|EFC38945.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 434
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 35/269 (13%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
LK L++ + D G + + I TL L + + G+T+ G + L L+ L++G +
Sbjct: 120 LKRLEIGDNQQFGDCGAESISKIKTLTSLNVLDCGITSKGAEFIGLLNGLTYLNIGNNKI 179
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 231
D ++ + L+ L L + +++++ ++ L+ L++ VT + +I
Sbjct: 180 MDSGMKFIGKLSSLNVLQIGSTEITSESFKLVGCMKGLTSLSIYSNPVTIEDAKSISSIH 239
Query: 232 SLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
L+ LN+SN I +EG + + L +SLA NE LLS
Sbjct: 240 GLKSLNISNTGIS--VEGLKYLSALTLLTNLSLAKNNITNE---------GLLS------ 282
Query: 289 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
++QMK + L L ++I D ++++ + NLR LN+S T+ ++ G+ +
Sbjct: 283 --------ISQMKQITKLFLQHNVIDCDGAQLLSTM-TNLRLLNISQTKITTEGIKHITS 333
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSL 377
L N+ L++S Q++D A+ +S M L
Sbjct: 334 -LKNITSLNISINQLNDEALKLVSSMNQL 361
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E + YL A L +L++A +T+ L +++ M + +L L V D G + L
Sbjct: 251 ISVEGLKYLSALTLLTNLSLAK-NNITNEGLLSISQMKQITKLFLQHNVIDCD-GAQLLS 308
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+++ L L +S+T +T +GI ++SL+N++ L++ + D L+ + + +L L
Sbjct: 309 TMTNLRLLNISQTKITTEGIKHITSLKNITSLNISINQLNDEALKLVSSMNQLTNLSTHN 368
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 241
+++++ GA + L+ LN++ G L +++L+ +N+SNC
Sbjct: 369 NKLTSEGAKHISQLNNLTELNISSNPVRIEGANYLNQMTTLKIINVSNC 417
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 51/344 (14%)
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV----TDLVLRSLQVLTKLEYLDLWGS 198
EKLWL +GI+ + ++ S +G + +++ +S L +LE D
Sbjct: 72 EKLWLCFIKEQQEGISRIFNIGVDSFRVVGSYFIDSINAEIISKSFPNLKRLEIGD--NQ 129
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENK 253
Q + GA + L+ LN+ G+T + ++ L LN+ N
Sbjct: 130 QFGDCGAESISKIKTLTSLNVLDCGITSKGAEFIGLLNGLTYLNIGN------------- 176
Query: 254 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSS 311
KI +G FI + S L+ L + ++ ++ F + MK L L + S+
Sbjct: 177 ---NKIMDSGMKFIGK--------LSSLNVLQIGSTEITSESFKLVGCMKGLTSLSIYSN 225
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
+ + + ++ + L++LN+SNT S G+ L+ L L LSL+ I + + +
Sbjct: 226 PVTIEDAKSISSIHG-LKSLNISNTGISVEGLKYLSA-LTLLTNLSLAKNNITNEGLLSI 283
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
S M + K F+Q + D L+ + NL LN+ QT+++ + +
Sbjct: 284 SQMKQIT---------KLFLQHNVIDCDGAQLLSTMTNL---RLLNISQTKITTEGIKHI 331
Query: 432 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
++ K + L++ L D +L +SS+++LTNLS + LT+ G
Sbjct: 332 TSLKNITSLNISINQLNDEALKLVSSMNQLTNLSTHNNKLTSEG 375
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 74 GENSVDAEWMAYLGAFRYLRSL----NVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+N++ E + + + + L NV DC L+ MT L+ L++S+ K+T
Sbjct: 271 AKNNITNEGLLSISQMKQITKLFLQHNVIDC-----DGAQLLSTMTNLRLLNISQ-TKIT 324
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
G+KH+ S+ + L +S L + + L+SS+ L+ L +T + + L
Sbjct: 325 TEGIKHITSLKNITSLNISINQLNDEALKLVSSMNQLTNLSTHNNKLTSEGAKHISQLNN 384
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L L++ + V GA L L +N++
Sbjct: 385 LTELNISSNPVRIEGANYLNQMTTLKIINVS 415
>gi|290976637|ref|XP_002671046.1| predicted protein [Naegleria gruberi]
gi|284084611|gb|EFC38302.1| predicted protein [Naegleria gruberi]
Length = 350
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 30/319 (9%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + + YL L LN++ C ++T+ + ++ GM L L++S + D+G+
Sbjct: 34 GYNDIGYKAVEYLSKLEKLTILNISKC-KITNLGIESMIGMKQLTSLEISEN-GIDDSGV 91
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K L+ +S L KL + + +G +S ++NL+ L +G + + ++ + L +L L
Sbjct: 92 KSLIELSQLTKLDIDHNEIRTEGCKCISQMKNLTDLSVGLNGIDEEGIKFICELKQLTNL 151
Query: 194 DLWGSQ-VSNRGAAVLKMFPRLSFLNLA--WTGVTKLPNISSLECLNLSNCTIDSILEGN 250
Q VS G + +L LN+ W G IS ++ L + S L
Sbjct: 152 SAHAIQIVSVDGVQSITSLKQLISLNIGDNWIGDAGAKVISEMK--QLKTLYMHSTL--- 206
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDL 308
I + GT I+ E + L+FLD+S ++L ++ + L L +
Sbjct: 207 --------IGIDGTKSIS--------EMTNLTFLDISANNLGDEGAKLISGLNQLIKLWI 250
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
S IG++ E ++ + L L++ + G L+ L +L L +S I+D +
Sbjct: 251 SEISIGNEGAESISKL-EKLTELDVHRNSIETEGAKSLS-KLKHLTRLDISENFIEDSGV 308
Query: 369 SYMSMMPSLKFIDISNTDI 387
Y+S M LK +++ + I
Sbjct: 309 KYLSKMKKLKHLNVYDNGI 327
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 164/356 (46%), Gaps = 49/356 (13%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL---SETGLTADGIAL 159
++S A ++ + L EL + D G K + +S LEKL + S+ +T GI
Sbjct: 14 ISSEATQSIGNLINLTEL----SIGYNDIGYKAVEYLSKLEKLTILNISKCKITNLGIES 69
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
+ ++ L+ L++ + D ++SL L++L LD+ +++ G + L+ L++
Sbjct: 70 MIGMKQLTSLEISENGIDDSGVKSLIELSQLTKLDIDHNEIRTEGCKCISQMKNLTDLSV 129
Query: 220 AWTGVTK--LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAK-ISL-AGTTFINEREAF 273
G+ + + I L+ L NLS I + ++G ++ L + ISL G +I + A
Sbjct: 130 GLNGIDEEGIKFICELKQLTNLSAHAIQIVSVDGVQSITSLKQLISLNIGDNWIGDAGAK 189
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
+ +++MK L+ L + S++IG D + ++ + NL L++
Sbjct: 190 V----------------------ISEMKQLKTLYMHSTLIGIDGTKSISEM-TNLTFLDI 226
Query: 334 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 393
S G +++G L L L +S I + +S + L +D+ I
Sbjct: 227 SANNLGDEGAKLISG-LNQLIKLWISEISIGNEGAESISKLEKLTELDVHRNSI------ 279
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
ET+ SL+ L+ HL RL++ + + D+ + LS K+L HL++ + + +
Sbjct: 280 ---ETEGAKSLSKLK---HLTRLDISENFIEDSGVKYLSKMKKLKHLNVYDNGIDN 329
>gi|296120888|ref|YP_003628666.1| hypothetical protein Plim_0620 [Planctomyces limnophilus DSM 3776]
gi|296013228|gb|ADG66467.1| hypothetical protein Plim_0620 [Planctomyces limnophilus DSM 3776]
Length = 219
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 94 SLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
S +++D + VT L L G+ + L+L R K+TDAG+ H+ ++ L KL L +T +T
Sbjct: 80 SFHLSD-QPVTDEQLALLPGLPEVAILNL-RGTKITDAGLVHVGTLKNLLKLHLEKTAIT 137
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
G+A LS L+ L L+L G VT ++ L L KL+ L LW ++VS+
Sbjct: 138 DAGLAHLSGLEKLEYLNLYGTKVTGAGVKGLAKLPKLQRLYLWQTEVSD 186
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L L + LNL T+++DA L + T K L+ L L ++TD L LS L KL
Sbjct: 93 LALLPGLPEVAILNLRGTKITDAGLVHVGTLKNLLKLHLEKTAITDAGLAHLSGLEKLEY 152
Query: 464 LSIRDAVLTNSGL-GSFKPPR 483
L++ +T +G+ G K P+
Sbjct: 153 LNLYGTKVTGAGVKGLAKLPK 173
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
+ +LS+ + + +L G LP + IL+L GT+I D + ++ + +L + + T I
Sbjct: 80 SFHLSDQPVTDEQLALLPG-LPEVAILNLRGTKITDAGLVHVGTLKNLLKLHLEKTAI-- 136
Query: 390 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
TD L L L LE LNL T+V+ A + L+ +L L L ++D
Sbjct: 137 --------TD--AGLAHLSGLEKLEYLNLYGTKVTGAGVKGLAKLPKLQRLYLWQTEVSD 186
Query: 450 VSLHQL 455
L +L
Sbjct: 187 ADLQEL 192
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LS+ +T + +ALL L +++L+L G +TD L + L L L L + +++ G A
Sbjct: 83 LSDQPVTDEQLALLPGLPEVAILNLRGTKITDAGLVHVGTLKNLLKLHLEKTAITDAGLA 142
Query: 207 VLKMFPRLSFLNLAWTGVT--------KLPNISSL 233
L +L +LNL T VT KLP + L
Sbjct: 143 HLSGLEKLEYLNLYGTKVTGAGVKGLAKLPKLQRL 177
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
L + R+ FL L T + P IS + T+ + +K +A++ G +
Sbjct: 10 LAVVARMGFLGLLTTFIWSNPFIS-IGAEGTPATTVKPVTYTEAHKQVIAQVKSKGGQVL 68
Query: 268 NEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
+ ++ S LS V++ L+ L ++ L +L + I D + V +
Sbjct: 69 ALAQTDARLDVSFHLSDQPVTDEQLALLPGLPEVAIL---NLRGTKITDAGLVHVGTL-K 124
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL L+L T + AG+ L+G L LE L+L GT++ + ++ +P L+ + + T+
Sbjct: 125 NLLKLHLEKTAITDAGLAHLSG-LEKLEYLNLYGTKVTGAGVKGLAKLPKLQRLYLWQTE 183
Query: 387 I 387
+
Sbjct: 184 V 184
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+ V E +A L + LN+ + +T + L + + L +L L + +TDAG+
Sbjct: 85 DQPVTDEQLALLPGLPEVAILNLRGTK-ITDAGLVHVGTLKNLLKLHLEKTA-ITDAGLA 142
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
HL + LE L L T +T G+ L+ L L L L V+D L+ LQV
Sbjct: 143 HLSGLEKLEYLNLYGTKVTGAGVKGLAKLPKLQRLYLWQTEVSDADLQELQV 194
>gi|283778672|ref|YP_003369427.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
gi|283437125|gb|ADB15567.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
Length = 450
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 45/261 (17%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTDA + L I +++L+L T L+ G+A L+ L +L L L LP+ D L+ L
Sbjct: 215 VTDAVLPKLAKIPEIKRLFLGSTKLSGGGLATLAPLVDLEYLSLKQLPIDDRDLQELPEF 274
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 247
KL L L ++V++ G L P+ + L+ W T++ + LE +S T+ S+
Sbjct: 275 PKLMSLGLDFTEVTDAG---LTKLPKFAMLDTLWLDATRVTDEGMLEVAKIS--TLRSL- 328
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
F+ + F L ++ +L +L
Sbjct: 329 -----------------------------------FMPATQVKGPGFSHLMKLASLRYLS 353
Query: 308 LSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
L + D V + VG N+ L L +T + + L G + L+ L LS T + D
Sbjct: 354 LKGVQL--DDVALQHLVGLENIEILGLDHTNVTDKQIEQLVG-MTRLKTLWLSKTAVTDG 410
Query: 367 AISYMSMMPSLKFIDISNTDI 387
AI +S + SL+ + + +++
Sbjct: 411 AIESLSKIRSLQTVYLHGSEV 431
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+D + L F L SL + D VT + L L L L L +VTD GM +
Sbjct: 263 IDDRDLQELPEFPKLMSLGL-DFTEVTDAGLTKLPKFAMLDTLWLD-ATRVTDEGMLEVA 320
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
ISTL L++ T + G + L L +L L L G+ + D+ L+ L L +E L L
Sbjct: 321 KISTLRSLFMPATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEILGLDH 380
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDS 245
+ V+++ L RL L L+ T VT L I SL+ + L + +
Sbjct: 381 TNVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHGSEVSA 433
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
FL + S L + LE+L L I D ++ + L +L L T + AG
Sbjct: 233 FLGSTKLSGGGLATLAPLVDLEYLSLKQLPIDDRDLQELPEF-PKLMSLGLDFTEVTDAG 291
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
+ L L+ L L T++ D + ++ + +L+ + + T +KG
Sbjct: 292 LTKLP-KFAMLDTLWLDATRVTDEGMLEVAKISTLRSLFMPATQVKGP------------ 338
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
+ L L L L+L+ Q+ D L L + + L L + ++TD + QL +++L
Sbjct: 339 GFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEILGLDHTNVTDKQIEQLVGMTRLK 398
Query: 463 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L + +T+ + S RSL+ + LHG
Sbjct: 399 TLWLSKTAVTDGAIESLSKIRSLQTVYLHG 428
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
V E M + LRSL + +V L + L+ L L + V++ D ++HL+
Sbjct: 311 VTDEGMLEVAKISTLRSLFMP-ATQVKGPGFSHLMKLASLRYLSL-KGVQLDDVALQHLV 368
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ +E L L T +T I L + L L L VTD + SL + L+ + L G
Sbjct: 369 GLENIEILGLDHTNVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLHG 428
Query: 198 SQVSNRGAAVLK 209
S+VS GA L+
Sbjct: 429 SEVSADGAERLR 440
>gi|218187578|gb|EEC70005.1| hypothetical protein OsI_00548 [Oryza sativa Indica Group]
Length = 1018
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 157/390 (40%), Gaps = 50/390 (12%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G + E + +G + L SL ++ V + W +T +T L L SRC +T +
Sbjct: 368 GASQFSGELPSSIGWLKSLNSLEISGTTIVGTIPSW-ITNLTSLTILQFSRC-GLTGSIP 425
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEY 192
L ++ L KL L E + +S+ NLS L L V + L SL L L Y
Sbjct: 426 SFLGKLTKLRKLVLYECNFSGKLPQHISNFTNLSTLFLNSNNLVGTMKLASLWGLQHLRY 485
Query: 193 LDLWGSQ---VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI----SSLECLNLSNCTIDS 245
LD+ + V + + P+L L L+ +TK P+ L L+LS I
Sbjct: 486 LDISDNNLVVVDGKVNSSSTHIPKLQILALSGCNITKFPDFLRSQDELLWLDLSKNQIHG 545
Query: 246 ILEG----NENKAPLAKISLAGTTFI-------------------NEREAFLYIETSLLS 282
+ + N + +A + LA F N E + I
Sbjct: 546 AIPSWAWESWNDSGVASLILAHNKFTSVGSNPFIPLQIDWLDLSNNMFEGTIPIPQGSAR 605
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA--CVGANLRNLNLSNTRFSS 340
FLD SN+ S F L H+ L ++ + S E+ C L+ L+LSN FS
Sbjct: 606 FLDYSNNMFSSIPF-NFTAHLSHVTLFNAPGNNFSGEIPPSFCTATELQYLDLSNNNFSG 664
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
+ L ++ ++IL+L+ Q+D + S + S I+G L
Sbjct: 665 SIPSCLIENVNGIQILNLNANQLDGEIPDTIKEGCSFHALYFSGNRIEG---------QL 715
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFP 430
SL A QN LE L+ + Q++D +FP
Sbjct: 716 PRSLLACQN---LEILDAGKNQIND--IFP 740
>gi|168701995|ref|ZP_02734272.1| hypothetical protein GobsU_20883 [Gemmata obscuriglobus UQM 2246]
Length = 684
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 160/370 (43%), Gaps = 46/370 (12%)
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L+ DL V D L L+ L + L G++V++ G A LK L+ LNLA++GVT
Sbjct: 41 LTAADLTDRAVADADLARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVT 100
Query: 226 K--LPNISSLECLN---LSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
L ++++ L + T+ D+ L L I L+GT A L
Sbjct: 101 DAGLADLNAFPLLTSLWVQGTTVSDAGLAVARELPALTHIDLSGTKVTGPGLAHLKGLKG 160
Query: 280 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
L L + + + C+L + + L LS + + D + + + A L L++ TR +
Sbjct: 161 LTLLLSGTALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKA-LGTLDVRKTRAT 219
Query: 340 SAGVGIL------------AGHLPNLEILSLSGTQI--------------DDYAISYMSM 373
A + L AG P L++ L+ + D A + +
Sbjct: 220 PASLAELHKSVPGCRIRDSAGDRPPLDVNRLAAEWVLSVGGSVGVSGQPRDIRAAADLPQ 279
Query: 374 MP-SLKFIDISNTDIK----GFIQQVGAETDLVL--------SLTALQNLNHLERLNLEQ 420
P +L +++S+ +K G + T+LVL +L L+NL L+ L+L
Sbjct: 280 GPLALARVNLSDRSVKDDDLGRLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSLTG 339
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
T V+DA L + K L L L + +T+ L L+ L+ L+++ + ++++GL K
Sbjct: 340 TDVTDAGLARIRERKSLTTLHLSSTKVTNAGLVHLAGLAGLSHIHLDGTGVSDAGLVHLK 399
Query: 481 PPRSLKLLDL 490
LK L L
Sbjct: 400 GLTDLKTLGL 409
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 186/439 (42%), Gaps = 34/439 (7%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L AF L SL V V+ + L + L +DLS KVT G+ HL + L
Sbjct: 104 LADLNAFPLLTSLWVQGTT-VSDAGLAVARELPALTHIDLS-GTKVTGPGLAHLKGLKGL 161
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L LS T LT + L L + L L P+TD L L L L LD+ ++ +
Sbjct: 162 TLL-LSGTALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKALGTLDVRKTRATP 220
Query: 203 RGAAVL-KMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA------- 254
A L K P + A N + E + ++ + + +A
Sbjct: 221 ASLAELHKSVPGCRIRDSAGDRPPLDVNRLAAEWVLSVGGSVGVSGQPRDIRAAADLPQG 280
Query: 255 --PLAKISLAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSS 311
LA+++L+ + ++ L T L L + + + +L + L+ L L+ +
Sbjct: 281 PLALARVNLSDRSVKDDDLGRLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSLTGT 340
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
+ D + + +L L+LS+T+ ++AG+ LAG L L + L GT + D + ++
Sbjct: 341 DVTDAGLARIRER-KSLTTLHLSSTKVTNAGLVHLAG-LAGLSHIHLDGTGVSDAGLVHL 398
Query: 372 SMMPSLKFIDISNTDIKG---------------FIQQVGAETDLVLSLTALQNLNHLERL 416
+ LK + +S T + G ++ G + L+ L H L
Sbjct: 399 KGLTDLKTLGLSRTRVLGPGLAHTHSWKRLDALYLTNTGVTDEAFAHLSPHHTLRH---L 455
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+ T ++DA + + LI L+L + ++ D L QL S + T+L++R+ +T GL
Sbjct: 456 GADGTGLTDAGMAHVRHLTGLISLNLSDTAVGDAGLMQLGSNAGPTHLTVRNTKVTLRGL 515
Query: 477 GSFKPPRSLKLLDLHGGWL 495
+F + + GG L
Sbjct: 516 HAFHATGPWRTVTWDGGQL 534
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 150/350 (42%), Gaps = 50/350 (14%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L G + DA +A + + L +L+++ + VT++ L L G+ L + L V+
Sbjct: 335 LSLTGTDVTDA-GLARIRERKSLTTLHLSSTK-VTNAGLVHLAGLAGLSHIHLD-GTGVS 391
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DAG+ HL ++ L+ L LS T + G+A S + L L L VTD L
Sbjct: 392 DAGLVHLKGLTDLKTLGLSRTRVLGPGLAHTHSWKRLDALYLTNTGVTDEAFAHLSPHHT 451
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI- 243
L +L G+ +++ G A ++ L LNL+ T G+ +L + + L + N +
Sbjct: 452 LRHLGADGTGLTDAGMAHVRHLTGLISLNLSDTAVGDAGLMQLGSNAGPTHLTVRNTKVT 511
Query: 244 -------------------DSILEGNENKAPLAKISLAG------TTFINE--------R 270
L E A+ +LA + NE +
Sbjct: 512 LRGLHAFHATGPWRTVTWDGGQLGPTEADRSAARWALAAGGRLRVSGVPNEIVAAGELPK 571
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
F+ E + L+ L VS++ L+ +LT M LDL+ S I +D + + + LR
Sbjct: 572 RKFVVTELA-LNGLAVSDTELAALKYLTGM---SRLDLAGSAITNDGLAHLKGL-TGLRR 626
Query: 331 LNLSNTRFSSAGV-GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 379
L LS TR + AG+ I A L L++L + TQ A + + P K
Sbjct: 627 LGLSETRVTDAGLDAIKALPLTELDLLGTAVTQ--KGAEGFRAAQPGCKV 674
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 154/397 (38%), Gaps = 65/397 (16%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
RVT +AL L + L+ L L+ VTDAG+ + +L L LS T +T G+ L+
Sbjct: 317 RVTDAALGYLKNLARLQFLSLT-GTDVTDAGLARIRERKSLTTLHLSSTKVTNAGLVHLA 375
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L LS + L G V+D L L+ LT L+ L L ++V G A + RL L L
Sbjct: 376 GLAGLSHIHLDGTGVSDAGLVHLKGLTDLKTLGLSRTRVLGPGLAHTHSWKRLDALYLTN 435
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SL 280
TGVT EAF ++
Sbjct: 436 TGVTD--------------------------------------------EAFAHLSPHHT 451
Query: 281 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
L L + L+ + + L L+LS + +GD + M A +L + NT+
Sbjct: 452 LRHLGADGTGLTDAGMAHVRHLTGLISLNLSDTAVGDAGL-MQLGSNAGPTHLTVRNTKV 510
Query: 339 SSAGVGILAGHLPNLEIL----SLSGTQIDDYAISY-MSMMPSLKFIDISNTDI------ 387
+ G+ P + L T+ D A + ++ L+ + N +
Sbjct: 511 TLRGLHAFHATGPWRTVTWDGGQLGPTEADRSAARWALAAGGRLRVSGVPNEIVAAGELP 570
Query: 388 -KGFIQQVGAETDLVLS---LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
+ F+ A L +S L AL+ L + RL+L + +++ L L L L L
Sbjct: 571 KRKFVVTELALNGLAVSDTELAALKYLTGMSRLDLAGSAITNDGLAHLKGLTGLRRLGLS 630
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
+TD L + +L LT L + +T G F+
Sbjct: 631 ETRVTDAGLDAIKAL-PLTELDLLGTAVTQKGAEGFR 666
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCL 117
SL + N E E+R + A+ A A R++ AD R+ ALT +
Sbjct: 14 SLNGAVQVNGEEREIRSAADLPADRFALTAADLTDRAVADADLARLKDC--QALTRI--- 68
Query: 118 KELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVT 177
+ KVTDAG+ HL +S L L L+ +G+T G+A L++ L+ L + G V+
Sbjct: 69 ----ILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLADLNAFPLLTSLWVQGTTVS 124
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
D L + L L ++DL G++V+ G A
Sbjct: 125 DAGLAVARELPALTHIDLSGTKVTGPGLA 153
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L++ L R+ L T+V+DA L L L HL+L + +TD L L++ LT+
Sbjct: 56 LARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLADLNAFPLLTS 115
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
L ++ ++++GL + +L +DL G
Sbjct: 116 LWVQGTTVSDAGLAVARELPALTHIDLSG 144
>gi|449458744|ref|XP_004147107.1| PREDICTED: F-box/LRR-repeat protein 20-like [Cucumis sativus]
gi|449503502|ref|XP_004162034.1| PREDICTED: F-box/LRR-repeat protein 20-like [Cucumis sativus]
Length = 421
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 161/363 (44%), Gaps = 50/363 (13%)
Query: 21 GESVQKW-RRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVD 79
G ++W R Q ++L A LLR + R F LLE+ + + D
Sbjct: 47 GLVCKRWLRVQSNERKKLSARAGPHLLRKMASR---FSRLLELDLSQSTSRSFY-PGVTD 102
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHLL- 137
++ F+YL LN+ C+ ++ S L A+ +G++ L+ LD+S C K+TD G +
Sbjct: 103 SDLTVVANGFQYLIVLNLQYCKSISDSGLAAIGSGLSKLQSLDVSYCRKLTDKGFSAVAE 162
Query: 138 SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYL 193
+ L L+ L DG+ L + +L L L G +TD LR L + K+E L
Sbjct: 163 GCRDIRNLNLAGCKLVTDGLLKTLSKNCHSLEELGLHGCTNITDSGLRELVKGCQKIEIL 222
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
D+ ++ SN G + +++ + L L+C + + DSIL E
Sbjct: 223 DV--NKCSNVG--------DVGVSSVSKACSSSLKTFKLLDCYKIKD---DSILSLAEFC 269
Query: 254 APLAKISLAGTTFINE---REAFLYIETSLLSF-----LDVSNSSLSRFCFLTQMKALEH 305
L + + G I++ ++ L +++L + L++++SSLS C T LE
Sbjct: 270 NNLETLIIGGCRDISDESIQKLALACKSNLRTLRMDWCLNITDSSLS--CIFTHCSNLEA 327
Query: 306 LDLSSS---------MIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEI 355
LD+ +G D +E+ NL+ L +SN + + A + IL +LE
Sbjct: 328 LDIGCCEEVTDAAFHSLGSDGIEV------NLKVLKISNCPKITLATISILVDSCNSLEY 381
Query: 356 LSL 358
L +
Sbjct: 382 LDV 384
>gi|328708332|ref|XP_003243660.1| PREDICTED: leucine-rich repeat-containing protein 4B-like
[Acyrthosiphon pisum]
Length = 597
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 157/376 (41%), Gaps = 69/376 (18%)
Query: 79 DAEWMAYLG--AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
D E +A L A YL N+ D + +L +T L+ LDLS + + HL
Sbjct: 122 DIESLANLTQLAILYLYRNNIMDIK--------SLAHLTKLETLDLSYNEIMDIESLAHL 173
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+ TL+ LS ++ ++L L L L + ++ LT LE L L
Sbjct: 174 TELETLD---LSNNNISELKHGAFANLSKLQSLFLYTNKIENIETGVFNNLTSLESLSLH 230
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-----ISSLECLNLSNCTIDSILEGNE 251
+ + N + + K RL L L+ +T++ N + L+ L+L N I I
Sbjct: 231 DNSIHNLDSEIFKGLTRLEKLTLSNNNITEVKNRVFSNLPKLQILDLQNNKISGI----- 285
Query: 252 NKAPLAKISLAGTTFINEREAFLYI---ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 308
ERE+F Y+ ET +LS ++S F +++++L DL
Sbjct: 286 -----------------ERESFTYLTKLETLILSNNNISEVQNGAFANFSKLQSL---DL 325
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
S + I D +E ++ + L LNLSN S G +L L+ L LSG +ID+
Sbjct: 326 SYNFIMD--IESLSHL-TELETLNLSNNNISEVKNGAFT-NLWKLQALFLSGNKIDNIET 381
Query: 369 SYMSMMPSLK--FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
+ + SL+ F+D +N I ++ L + L L RL L+ + +
Sbjct: 382 GAFNNLTSLRALFLDYNN------IHKI--------DLDMFKGLKKLNRLFLDHNMIRN- 426
Query: 427 TLFPLSTFKELIHLSL 442
P TF L LS+
Sbjct: 427 --IPPGTFDSLASLSV 440
>gi|407705527|ref|YP_006829112.1| ATP-grasp domain-containing protein [Bacillus thuringiensis MC28]
gi|407383212|gb|AFU13713.1| Internalin [Bacillus thuringiensis MC28]
Length = 670
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLRS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDLSGID 387
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PL + K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITNVA--PLRSLKNVTYLTL--------AGNQVEDIT 363
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 364 PLYALPLKDLVLT 376
>gi|374850803|dbj|BAL53782.1| hypothetical conserved protein, partial [uncultured planctomycete]
Length = 351
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 45/288 (15%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
R+T + + L+EL L+ V D +++L ++ +LE L L+ T + G+ +
Sbjct: 99 RLTPQGWRKIAELRALRELYLADS-NVDDEDLQYLANLGSLETLDLAWTPMKGTGLKHVG 157
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
++NL VL L + D + + LTKLE LDL G+ V+++G + F
Sbjct: 158 QIRNLRVLLLTHTKIADEHIAQIVPLTKLEKLDLGGTLVTDKG---------MEF----- 203
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 281
V++L N+ L C + T D+ LA++ + + T L
Sbjct: 204 --VSRLANLKDLRCPE--SLTDDAT-------KLLARL--------------VQLRTLCL 238
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
S V++ + L+++++L DLS + I D +++ + + + L +L LS T + A
Sbjct: 239 SSSCVTSQGVESLKTLSELRSL---DLSRTKIDDRALDQITVL-SKLEHLLLSETNITDA 294
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
V + G NL+ L L GT+I D + + + +L+ +++S T + G
Sbjct: 295 -VAPVIGRFMNLKSLFLDGTKISDSVLQEVGKVHTLERLNLSKTAVTG 341
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
VT + ++ + LK+L RC + +TD K L + L L LS + +T+ G+ L
Sbjct: 196 VTDKGMEFVSRLANLKDL---RCPESLTDDATKLLARLVQLRTLCLSSSCVTSQGVESLK 252
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
+L L LDL + D L + VL+KLE+L L + +++ A V+ F L L L
Sbjct: 253 TLSELRSLDLSRTKIDDRALDQITVLSKLEHLLLSETNITDAVAPVIGRFMNLKSLFLDG 312
Query: 222 TGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
T ++ ++ + +LE LNLS + EG ++ PLA
Sbjct: 313 TKISDSVLQEVGKVHTLERLNLSKTAVTG--EGLQHLTPLA 351
>gi|391335820|ref|XP_003742286.1| PREDICTED: chaoptin-like [Metaseiulus occidentalis]
Length = 1341
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 173/401 (43%), Gaps = 50/401 (12%)
Query: 89 FRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW 146
FR LR+L +R +T+ A + + +T L+ L+L+ ++ G + L+ L
Sbjct: 604 FRGLRALEELSLQRNNLTNLAKGSFSFLTRLRLLNLAHN-QLGAIGADTFGPMPGLQSLN 662
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LS++GL + L L VLDL G P+ VLR L L++L L L + S
Sbjct: 663 LSDSGLNSIENGAFDGLTGLEVLDLSGNPIK--VLR-LSGLSQLRLLRLASTSPSKLAEG 719
Query: 207 VLKMFPRLSFLNLAWTGVTKLPN-------ISSLECLNLSNCTIDSILEGNENKAPLAKI 259
+ L L+L+ + + PN +SSL L + I S+ +G N PL ++
Sbjct: 720 LFDKMTSLEELDLSASHIN--PNRVGLFERLSSLHTLRAGHNNISSLRQGLLNALPLREV 777
Query: 260 SLAGT--TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
SL G T I +ET L+ +N ++ R L ALE LDLSS++IG +
Sbjct: 778 SLEGNSLTAIPTESINAQVETLRLA---GNNITILRSGCLKGFNALERLDLSSNLIGSIN 834
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 377
++ G LR L+LS+ R + LP + +G + D + S +P
Sbjct: 835 NDVFDESG--LRFLDLSSNRLRT---------LPYHLFRNTTGLEQLDLDANDFSYIP-- 881
Query: 378 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH----------LERLNLEQTQVSDAT 427
N + G + Q+G L LS + + LE L+L VS
Sbjct: 882 ------NAIVDGAV-QMGKLRVLKLSRNPMTRVREDFASGGLLPALEELDLSFGNVSILA 934
Query: 428 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
+ +F EL L+ + + VS L L +L +L + D
Sbjct: 935 TNDMHSFPELTLLTFAHNRINKVSPGALRPLRRLVSLDLSD 975
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 136/323 (42%), Gaps = 51/323 (15%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
RR+ LT T L LD + + D + L + L+ LS L + A
Sbjct: 549 RRLRVDMFRDLTSTTRLY-LDGNNVADIEDGAFETLAECTFLD---LSGNRLKSLRAAQF 604
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L+ L L L +T+L S LT+L L+L +Q+ GA P L LNL+
Sbjct: 605 RGLRALEELSLQRNNLTNLAKGSFSFLTRLRLLNLAHNQLGAIGADTFGPMPGLQSLNLS 664
Query: 221 WTGVTKLPN-----ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 275
+G+ + N ++ LE L+LS GN P+ + L+G +
Sbjct: 665 DSGLNSIENGAFDGLTGLEVLDLS---------GN----PIKVLRLSGLS---------- 701
Query: 276 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
+ LL S S L+ F +M +LE LDLS+S I + V + + ++L L +
Sbjct: 702 -QLRLLRLASTSPSKLAEGLF-DKMTSLEELDLSASHINPNRVGLFERL-SSLHTLRAGH 758
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
SS G+L LP E+ SL G + AI S+ ++ + ++ +I
Sbjct: 759 NNISSLRQGLLNA-LPLREV-SLEGNSL--TAIPTESINAQVETLRLAGNNIT------- 807
Query: 396 AETDLVLSLTALQNLNHLERLNL 418
+L L+ N LERL+L
Sbjct: 808 -----ILRSGCLKGFNALERLDL 825
>gi|388512917|gb|AFK44520.1| unknown [Medicago truncatula]
Length = 416
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 159/351 (45%), Gaps = 26/351 (7%)
Query: 21 GESVQKWRR-QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSV- 78
G ++W R Q ++L A +LR + R F L+E+ A++I V
Sbjct: 42 GLVCKRWLRLQSTERKKLSARAGPHMLRKMADR---FTRLVEL--DLAQSISRSFYPGVT 96
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHLL 137
D++ FR LR LN+ +C+ +T + A+ G++ L LD+S C K+TD G+ +
Sbjct: 97 DSDLAVIANGFRCLRILNLHNCKGITDVGMKAIGDGLSLLHSLDVSYCRKLTDKGLSAVA 156
Query: 138 -SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGL-PVTDLVLRSLQV-LTKLEY 192
L L L+ D I AL + +NL L L G +TD L SL ++++
Sbjct: 157 KGCCDLRILHLTGCRFVTDSILEALSKNCRNLEELVLQGCTSITDNGLMSLASGCQRIKF 216
Query: 193 LDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE 251
LD+ S VS+ G + + S L ++ + S L + +++++ G
Sbjct: 217 LDINKCSTVSDVGVSSICNACSSSLKTLKLLDCYRIGDKSILSLAKFCD-NLETLIIGGC 275
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
I L T N+ + + L+VS+SSLS C L+Q + LE LD+
Sbjct: 276 RDVSNDAIKLLATACRNKLKNL-----RMDWCLNVSDSSLS--CILSQCRNLEALDIGCC 328
Query: 312 -MIGDDSVEMVAC--VGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 358
+ D + ++ G +L+ L +SN + + G+GIL G LE L +
Sbjct: 329 EEVTDTAFHHISNEEPGLSLKILKVSNCPKITVVGIGILLGKCSYLEYLDV 379
>gi|290994542|ref|XP_002679891.1| predicted protein [Naegleria gruberi]
gi|284093509|gb|EFC47147.1| predicted protein [Naegleria gruberi]
Length = 359
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 160/355 (45%), Gaps = 46/355 (12%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L +LD+S + V G + +++ L L +S L G ++ + L+ L++ +
Sbjct: 41 LTKLDVSSWL-VNAEGANMISNLAHLADLDISNNQLLERGSKIIREMTQLTKLNISRNNI 99
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 231
+S+ +T+L LD+ + + N GA+ + +L+ L+++ G+ L +I+
Sbjct: 100 NAGGTKSICEMTQLTDLDISNNFIGNEGASYIGGMTKLTNLSISENHIGVEGIKSLFHIN 159
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
+L CLN+S+C KI G I+E + L+ L++S++ +
Sbjct: 160 NLICLNISSC----------------KIGDEGARLISEMKQ--------LTTLEISHNEI 195
Query: 292 SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
+ +++M L L++ +++G++ + + L L++S+ R S G L+
Sbjct: 196 GSYGSKAISEMYQLTKLNIRYNVLGNEGAHYIGIM-EQLTELDISHNRISGEGAKSLS-K 253
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L L L ++ +I D + +S + L ++DI +I +G T L++ ++ L
Sbjct: 254 LSQLTKLDINTNEIGDEGMKSISKLDQLLYLDIGENEIG----DIG--TGLIIGMSKLT- 306
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
L + +V + L+ +L L + N + D SL LS L L N
Sbjct: 307 -----ELLINDNRVGNDGAESLAQMHQLTQLDICNNPVNDDSLELLSKLPDLINF 356
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 31/304 (10%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
L L LD+ +Q+ RG+ +++ +L+ LN++ + S E L++ I +
Sbjct: 62 LAHLADLDISNNQLLERGSKIIREMTQLTKLNISRNNINAGGTKSICEMTQLTDLDISNN 121
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
GNE + + + T ++ E + +E + S ++N C L
Sbjct: 122 FIGNEGASYIG--GMTKLTNLSISENHIGVE-GIKSLFHINN----LIC----------L 164
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
++SS IGD+ +++ + L L +S+ S G ++ + L L++ + +
Sbjct: 165 NISSCKIGDEGARLISEM-KQLTTLEISHNEIGSYGSKAIS-EMYQLTKLNIRYNVLGNE 222
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
Y+ +M L +DIS+ I G GA+ +L L+ L +L++ ++ D
Sbjct: 223 GAHYIGIMEQLTELDISHNRISG----EGAK--------SLSKLSQLTKLDINTNEIGDE 270
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 486
+ +S +L++L + + D+ + +SKLT L I D + N G S L
Sbjct: 271 GMKSISKLDQLLYLDIGENEIGDIGTGLIIGMSKLTELLINDNRVGNDGAESLAQMHQLT 330
Query: 487 LLDL 490
LD+
Sbjct: 331 QLDI 334
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 31/291 (10%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L LN++ + + ++ MT L +LD+S + + G ++ ++ L L +SE
Sbjct: 89 LTKLNISR-NNINAGGTKSICEMTQLTDLDISNNF-IGNEGASYIGGMTKLTNLSISENH 146
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ +GI L + NL L++ + D R + + +L L++ +++ + G+ +
Sbjct: 147 IGVEGIKSLFHINNLICLNISSCKIGDEGARLISEMKQLTTLEISHNEIGSYGSKAISEM 206
Query: 212 PRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
+L+ LN+ + G + + L L++S+ I E L+K+S
Sbjct: 207 YQLTKLNIRYNVLGNEGAHYIGIMEQLTELDISHNRISG-----EGAKSLSKLSQLTKLD 261
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
IN E + + + L Q L +LD+ + IGD ++ + +
Sbjct: 262 INTNE--------------IGDEGMKSISKLDQ---LLYLDIGENEIGDIGTGLIIGM-S 303
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 377
L L +++ R + G LA + L L + ++D ++ +S +P L
Sbjct: 304 KLTELLINDNRVGNDGAESLA-QMHQLTQLDICNNPVNDDSLELLSKLPDL 353
>gi|290973418|ref|XP_002669445.1| predicted protein [Naegleria gruberi]
gi|284082993|gb|EFC36701.1| predicted protein [Naegleria gruberi]
Length = 280
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 139 ISTLEKLWLSETG---LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
IS +++L L G + +G ++S ++ L+ LD+GG ++D RS+ + +L +LD+
Sbjct: 22 ISEMKQLTLLNIGTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKMRQLTFLDI 81
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGN 250
+G+ + ++GA + +L+ LN+ G + + L L++ ID +EG
Sbjct: 82 YGNGIGDKGAKSISEMQQLTLLNIGGNQIGDEGAKLISQMKQLTFLDIYCNEID--VEGA 139
Query: 251 ENKAPLAK----------ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
+ + + + I + G F++E + TSL ++ ++ ++QM
Sbjct: 140 KCISEMQQLTSLNIGSNEIGVEGVKFLSEMQQL----TSLNIGENLIGDEGAK--LISQM 193
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K L LD+ + IG + + ++ + L +LN+ G +++ + L L +
Sbjct: 194 KQLTFLDIYCNEIGVEGAKSISEM-QQLTSLNIGENGIGDEGAKLIS-EMKQLTFLDIYC 251
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDI 387
+I Y+S M L ++ISN I
Sbjct: 252 NEIGVEGAKYISEMKQLTSLNISNNQI 278
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 132/321 (41%), Gaps = 63/321 (19%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ +G L+S ++ L++L++G + D + + +L +LD+ G+Q+S+ GA +
Sbjct: 14 IGVEGAKLISEMKQLTLLNIGTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKM 73
Query: 212 PRLSFLNLAWTGV--TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
+L+FL++ G+ +IS ++ L L N + GN+ AK+
Sbjct: 74 RQLTFLDIYGNGIGDKGAKSISEMQQLTLLN------IGGNQIGDEGAKL---------- 117
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--AN 327
++QMK L LD+ + I VE C+
Sbjct: 118 ---------------------------ISQMKQLTFLDIYCNEI---DVEGAKCISEMQQ 147
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L +LN+ + GV L+ + L L++ I D +S M L F+DI
Sbjct: 148 LTSLNIGSNEIGVEGVKFLS-EMQQLTSLNIGENLIGDEGAKLISQMKQLTFLDI----- 201
Query: 388 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
+ ++G E ++ + L LN+ + + D +S K+L L + +
Sbjct: 202 --YCNEIGVE-----GAKSISEMQQLTSLNIGENGIGDEGAKLISEMKQLTFLDIYCNEI 254
Query: 448 TDVSLHQLSSLSKLTNLSIRD 468
+S + +LT+L+I +
Sbjct: 255 GVEGAKYISEMKQLTSLNISN 275
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 263 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEM 320
GT I + A + E L+FLD+ + +S +++M+ L LD+ + IGD +
Sbjct: 34 GTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKMRQLTFLDIYGNGIGDKGAKS 93
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
++ + L +L++ G QI D +S M L F+
Sbjct: 94 IS--------------------------EMQQLTLLNIGGNQIGDEGAKLISQMKQLTFL 127
Query: 381 DI--SNTDIKGF-----IQQ-----VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
DI + D++G +QQ +G+ V + L + L LN+ + + D
Sbjct: 128 DIYCNEIDVEGAKCISEMQQLTSLNIGSNEIGVEGVKFLSEMQQLTSLNIGENLIGDEGA 187
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
+S K+L L + + +S + +LT+L+I + + + G + L L
Sbjct: 188 KLISQMKQLTFLDIYCNEIGVEGAKSISEMQQLTSLNIGENGIGDEGAKLISEMKQLTFL 247
Query: 489 DLH 491
D++
Sbjct: 248 DIY 250
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + + + + L LN+ ++ ++ M L LD+ C ++ G K
Sbjct: 84 NGIGDKGAKSISEMQQLTLLNIGG-NQIGDEGAKLISQMKQLTFLDI-YCNEIDVEGAKC 141
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + + +G+ LS +Q L+ L++G + D + + + +L +LD+
Sbjct: 142 ISEMQQLTSLNIGSNEIGVEGVKFLSEMQQLTSLNIGENLIGDEGAKLISQMKQLTFLDI 201
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+ +++ GA + +L+ LN+ G+
Sbjct: 202 YCNEIGVEGAKSISEMQQLTSLNIGENGI 230
>gi|168700135|ref|ZP_02732412.1| hypothetical protein GobsU_11445 [Gemmata obscuriglobus UQM 2246]
Length = 120
Score = 58.9 bits (141), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L AL G+T L D KVTD G+K L + L +L L+ T +T G+ LS L L+
Sbjct: 4 LAALKGLTQLDLFD----TKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALT 59
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
LDLG VTD +++L L L L+L + V++ G L L+ L+L++T VT
Sbjct: 60 TLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVT 117
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
M L A + L L++ D + VT + L+G+ L L+L+ +VTDAG+K L ++ L
Sbjct: 1 MKELAALKGLTQLDLFDTK-VTDVGVKELSGLKGLTRLELT-FTQVTDAGVKALSGLTAL 58
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
L L T +T G+ LS L++L L+LG VTD +++L L L LDL ++V++
Sbjct: 59 TTLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVTD 118
Query: 203 RG 204
G
Sbjct: 119 AG 120
Score = 48.9 bits (115), Expect = 0.008, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
MK L ++ L +L L +T +T G+ LS L+ L+ L+L VTD +++L LT L
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 239
LDL ++V++ G L L LNL T GV L + L L+LS
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLS 112
Score = 44.7 bits (104), Expect = 0.17, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L L L RL L TQV+DA + LS L L L +TD + LS L L L++
Sbjct: 28 LSGLKGLTRLELTFTQVTDAGVKALSGLTALTTLDLGFTKVTDAGVKALSGLKHLIQLNL 87
Query: 467 RDAVLTNSGLGSFKPPRSLKLLDL 490
V+T++G+ + + L +LDL
Sbjct: 88 GVTVVTDAGVKALAGLKGLTILDL 111
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L L L L T++ D + +S + L ++++ T + TD + AL
Sbjct: 7 LKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQV----------TDA--GVKALSG 54
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
L L L+L T+V+DA + LS K LI L+L +TD + L+ L LT L +
Sbjct: 55 LTALTTLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFT 114
Query: 470 VLTNSG 475
+T++G
Sbjct: 115 RVTDAG 120
>gi|291001373|ref|XP_002683253.1| hypothetical protein NAEGRDRAFT_45222 [Naegleria gruberi]
gi|284096882|gb|EFC50509.1| hypothetical protein NAEGRDRAFT_45222 [Naegleria gruberi]
Length = 461
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 156/333 (46%), Gaps = 43/333 (12%)
Query: 109 WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS-LQNLS 167
A++ +T L++L+++ C K+ + G++ + + L +L + TG+ A G+ L+++ L+NL+
Sbjct: 155 QAISQLTNLQKLNVNNC-KIGNLGVQFITQLGNLMELSVINTGMDAKGLNLIATRLKNLT 213
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVT 225
L G L +++ LT L + V +GA + L+ L+L G+
Sbjct: 214 KLQFNGTVQHVTSLSNMKQLTSLSMG--FDVDVDVKGAKAISEMNNLTNLSLNTNDEGLE 271
Query: 226 KLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
++ ++ L L + + ++ L+ L K++L N+ E F L+S L
Sbjct: 272 EICKMTQLTSLKVCGFYLTTLGLKFLPRLKKLRKLNL------NDHEDFGNEGAKLISEL 325
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
D Q+ +LE D+ G + + L +L +SN + GV
Sbjct: 326 D-------------QLTSLEINDIGIDKKGAKFITNLK----QLTSLTISNNPIFNEGVK 368
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 404
L LP L L+ T+ID+ + Y+S M +LK ++I + ++Q +G E S+
Sbjct: 369 YLT-ELPQLTNLNARFTKIDNEGVKYLSEMANLKILNIK----RNYVQDLGVE-----SI 418
Query: 405 TALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 437
++NL L+ +EQ ++S+ + L K+L
Sbjct: 419 CGMKNLTELD---IEQNEISEEGVAKLKEMKQL 448
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 294 FC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
FC ++Q+ L+ L++++ IG+ V+ + +G NL L++ NT + G+ ++A L N
Sbjct: 153 FCQAISQLTNLQKLNVNNCKIGNLGVQFITQLG-NLMELSVINTGMDAKGLNLIATRLKN 211
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
L L +GT ++S M + SL + D+KG A+ +N+
Sbjct: 212 LTKLQFNGTVQHVTSLSNMKQLTSLSMGFDVDVDVKG--------------AKAISEMNN 257
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
L L+L +D L + +L L + LT + L L L KL L++ D
Sbjct: 258 LTNLSL---NTNDEGLEEICKMTQLTSLKVCGFYLTTLGLKFLPRLKKLRKLNLND 310
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ + G+K+L + L L T + +G+ LS + NL +L++ V DL + S+ +
Sbjct: 362 IFNEGVKYLTELPQLTNLNARFTKIDNEGVKYLSEMANLKILNIKRNYVQDLGVESICGM 421
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L LD+ +++S G A LK +L L A
Sbjct: 422 KNLTELDIEQNEISEEGVAKLKEMKQLKVLKKA 454
>gi|17546076|ref|NP_519478.1| GALA protein 5 [Ralstonia solanacearum GMI1000]
gi|17428372|emb|CAD15059.1| lrr-gala family type III effector protein (gala 7) [Ralstonia
solanacearum GMI1000]
Length = 647
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 166/393 (42%), Gaps = 49/393 (12%)
Query: 117 LKELDLSRC----VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
L+ +DL C + A +++L ++ LE L + + G ALL+ ++L L++
Sbjct: 202 LRHIDLGECDPGCGAKSHAAIEYLATL-PLESLNVKGAAIGDRGAALLAGNRSLKTLNVA 260
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
++++ R L LE LD+ G+Q+ RGA L + L L GVT P I +
Sbjct: 261 DGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSESIQTLRLCCCGVTD-PGIQA 319
Query: 233 ------LECLNLSNCTIDS----ILEGNENKAPLAKISLAGTTFINER------------ 270
L+ L++S I+ L N + L +S T + E
Sbjct: 320 LAGNRQLKSLDVSGNHINEDALRALAANPSLTTL-DVSCNRQTPVGEPQSVEQGVSMALA 378
Query: 271 --EAFLYIETSLLSFLDVSNS----SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
E + ET L S N+ ++ F T A L L S+ IG + + +A
Sbjct: 379 LAEGLVGRETPLASLKADGNAFVDFAVEMLAFPTIRTA--SLSLKSNFIGPEGAQKLAEN 436
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID--- 381
A L++L+L+ + AG L+ H +L+ LS+ + D ++ P+L +D
Sbjct: 437 PA-LKSLDLTRNKIGDAGAEALS-HSRSLKTLSVLNCDVKDPGAQALARNPTLTTLDLGN 494
Query: 382 -ISNTDIKGFIQQVGAETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
IS QQ E D + AL L L+++ DA + PL+
Sbjct: 495 LISEKQNPAARQQEQDEFDTTANEITENGTRALAQSPSLISLSVQGNLCEDAGVLPLARS 554
Query: 435 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
L L++ ++T S +L+S LT+L++R
Sbjct: 555 PRLTSLNVAYTNMTLESARELASNPVLTSLNVR 587
>gi|407849405|gb|EKG04153.1| hypothetical protein TCSYLVIO_004793 [Trypanosoma cruzi]
Length = 835
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 203/477 (42%), Gaps = 38/477 (7%)
Query: 45 LLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVT 104
LL H+ R FP ++ K + V + M + R LR+L V +C +
Sbjct: 100 LLDHIGREH--FPLFQDLKKRLKLRELKLLHSVVGCDMMHVMSTCRELRTLTVQNCFSES 157
Query: 105 SSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS--- 161
L +T + + + +G+ +L +S L L L T L+ + LS
Sbjct: 158 EVILRGVTSILSNRISEKREFSTFYISGVTNLGVLSNLRNLTLCNTPLSEVMMLYLSECV 217
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-- 219
SL+ + V GL + L SLQ LT+L L++ ++ G A + L + L
Sbjct: 218 SLERVVVNSCRGLRSLE-CLSSLQRLTELSLLNMG---ITEEGLAFISSCNSLRHIQLDN 273
Query: 220 --AWTGVTKLPNISSLECLNLS-NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
G+ L ++ L L++S N D + N L ++ L ++ E L +
Sbjct: 274 CMKLQGINCLGSLIGLRTLSVSRNRVSDDGIRSLSNLRNLEQLRLVSFNRLSSVEPVLCL 333
Query: 277 ETSLLSFLDVSNSSLSRFCF-LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
+ LL N C L ++ L L+S D V + C +LR L+LS
Sbjct: 334 D-KLLELDITENWVTDEGCAALANCGQIQKLKLASCRCVSD-VRWI-CALTSLRFLDLSK 390
Query: 336 TRFSSAGVGIL--AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--- 390
T SA + +L L L + S SG + S++ + SL +D+++T IK
Sbjct: 391 THVRSADLQLLTVCQRLEELHVASCSGVK----DASFVEGLLSLGHLDLTDTSIKDAGTQ 446
Query: 391 -IQQVGAETDLVLS----LTALQ---NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
+++ A T L L LT +Q L L LNLE T+V DA + PL +L LSL
Sbjct: 447 SLRKCTALTFLSLQDCRFLTDIQFVEPLKDLLNLNLEGTEVVDANIIPLMHCTKLEVLSL 506
Query: 443 RNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
R+ LTDV L L L +L + +T+ G+ SL+ +DL G L+T
Sbjct: 507 RHCLFLTDVRC--LRELKALKSLDLSGTYVTDEGVSDVSQCISLERIDLSGCCLITH 561
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 184/415 (44%), Gaps = 70/415 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTS-SALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ E +A++ + LR + + +C ++ + L +L G L+ L +SR +V+D G++ L
Sbjct: 252 ITEEGLAFISSCNSLRHIQLDNCMKLQGINCLGSLIG---LRTLSVSR-NRVSDDGIRSL 307
Query: 137 LSISTLEKLWL-----------------------SETGLTADGIALLSSLQNLSVLDLGG 173
++ LE+L L +E +T +G A L++ + L L
Sbjct: 308 SNLRNLEQLRLVSFNRLSSVEPVLCLDKLLELDITENWVTDEGCAALANCGQIQKLKLAS 367
Query: 174 L-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNIS 231
V+D+ R + LT L +LDL + V + +L + RL L++A +GV +
Sbjct: 368 CRCVSDV--RWICALTSLRFLDLSKTHVRSADLQLLTVCQRLEELHVASCSGVKDASFVE 425
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL-DVSNSS 290
L L + T SI + AGT + + A ++ FL D+
Sbjct: 426 GLLSLGHLDLTDTSIKD-------------AGTQSLRKCTALTFLSLQDCRFLTDIQ--- 469
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
F+ +K L +L+L + + D + + ++ C L L+L + F + V L
Sbjct: 470 -----FVEPLKDLLNLNLEGTEVVDANIIPLMHC--TKLEVLSLRHCLFLT-DVRCLR-E 520
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD-IKGF--------IQQVGAETDL 400
L L+ L LSGT + D +S +S SL+ ID+S I F ++ V A+
Sbjct: 521 LKALKSLDLSGTYVTDEGVSDVSQCISLERIDLSGCCLITHFEFLRPLTALRHVIADRMN 580
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
VL +T L +ER+++ + + + L+ LSL+ +++TD +H +
Sbjct: 581 VLDVTGLGGSGSVERVSIADCKRLGS--MGMLEAPRLLDLSLKKSAITDSGIHSV 633
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 30/262 (11%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
V + + L T L+ L L C+ +TD ++ L + L+ L LS T +T +G++ +S
Sbjct: 487 VVDANIIPLMHCTKLEVLSLRHCLFLTD--VRCLRELKALKSLDLSGTYVTDEGVSDVSQ 544
Query: 163 LQNLSVLDLGGL----------PVTDLVLRSLQVLTKLEYLDLWGSQVSNR--------- 203
+L +DL G P+T L + L+ L GS R
Sbjct: 545 CISLERIDLSGCCLITHFEFLRPLTALRHVIADRMNVLDVTGLGGSGSVERVSIADCKRL 604
Query: 204 GAAVLKMFPRLSFLNLAWTGVTK------LPNISSLECLNLSNCTIDSILEGNENKAPLA 257
G+ + PRL L+L + +T L SL LNL NCT + L L
Sbjct: 605 GSMGMLEAPRLLDLSLKKSAITDSGIHSVLLRCHSLRRLNLQNCTSITELSAVAQLPSLT 664
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDD 316
++ + N+ AF+ +L V ++ L + L LDLS +S+
Sbjct: 665 ELLVRNMKITNKSVAFVARCATLEKLQMVECVEITDVNSLKYLHRLVELDLSRTSVTSGG 724
Query: 317 SVEMVACVGANLRNLNLSNTRF 338
V + C NL+ LNLS R+
Sbjct: 725 IVGLARCY--NLKKLNLSGCRY 744
>gi|290987592|ref|XP_002676506.1| predicted protein [Naegleria gruberi]
gi|284090109|gb|EFC43762.1| predicted protein [Naegleria gruberi]
Length = 259
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 227 LPNISSLE--CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
LPNI +LE C T DS + G + KI G I ++ A +IE L+ L
Sbjct: 6 LPNIVTLEWTCSRYQKFTFDSGIFGTMKQLTKLKI---GENNIGDQNAKCFIEMKQLTSL 62
Query: 285 DVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
DV ++++S+ F+ +M L +L+++++ +G+ + ++ + L LN+ G
Sbjct: 63 DVYHNNISKEGAKFIGEMTQLTYLNVNTNNVGELGAKYISKLNQ-LITLNIGLNSIGEQG 121
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLV 401
++ + L L++ I + +++S M L IS NT G +
Sbjct: 122 AEYIS-EMKQLTDLNIYSCNIGNRGANHISRMKQL----ISLNTGRNGLDDE-------- 168
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
+ + LN L LN+ + +S+ L +S K++IHL + N + D +S + +L
Sbjct: 169 -GVKYISELNQLNFLNIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIISRMKQL 227
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
T L I + + G + L LD+
Sbjct: 228 TRLDISNNSIGEEGTKYISEMKKLTYLDI 256
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 57/257 (22%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
+ +++ L+ L +G + D + + +L LD++ + +S GA + +L++L
Sbjct: 27 GIFGTMKQLTKLKIGENNIGDQNAKCFIEMKQLTSLDVYHNNISKEGAKFIGEMTQLTYL 86
Query: 218 NLAWTGVTKL--PNISSLECLNLSNCTIDSILE----------------------GNENK 253
N+ V +L IS L L N ++SI E GN
Sbjct: 87 NVNTNNVGELGAKYISKLNQLITLNIGLNSIGEQGAEYISEMKQLTDLNIYSCNIGNRGA 146
Query: 254 APLAK----ISLAGTTFINEREAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQMKALEHL 306
+++ ISL + E YI E + L+FL++++S++S +++ MK + HL
Sbjct: 147 NHISRMKQLISLNTGRNGLDDEGVKYISELNQLNFLNIADSNISEEGLNYISGMKQIIHL 206
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
D+S++ I D+ E+++ + L L +S I +
Sbjct: 207 DISNNFIDDEGAEIIS--------------------------RMKQLTRLDISNNSIGEE 240
Query: 367 AISYMSMMPSLKFIDIS 383
Y+S M L ++DI
Sbjct: 241 GTKYISEMKKLTYLDIG 257
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N +D E + Y+ L LN+AD ++ L ++GM + LD+S + D G
Sbjct: 161 GRNGLDDEGVKYISELNQLNFLNIADSN-ISEEGLNYISGMKQIIHLDISNNF-IDDEGA 218
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
+ + + L +L +S + +G +S ++ L+ LD+G
Sbjct: 219 EIISRMKQLTRLDISNNSIGEEGTKYISEMKKLTYLDIG 257
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G NS+ + Y+ + L LN+ C + + ++ M L L+ R + D G+
Sbjct: 113 GLNSIGEQGAEYISEMKQLTDLNIYSCN-IGNRGANHISRMKQLISLNTGRN-GLDDEGV 170
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K++ ++ L L ++++ ++ +G+ +S ++ + LD+ + D + + +L L
Sbjct: 171 KYISELNQLNFLNIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIISRMKQLTRL 230
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLA 220
D+ + + G + +L++L++
Sbjct: 231 DISNNSIGEEGTKYISEMKKLTYLDIG 257
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 29/235 (12%)
Query: 289 SSLSRFCF----LTQMKALEHLDLSSSMIGDDS----VEMVACVGANLRNLNLSNTRFSS 340
S +F F MK L L + + IGD + +EM L +L++ + S
Sbjct: 17 SRYQKFTFDSGIFGTMKQLTKLKIGENNIGDQNAKCFIEM-----KQLTSLDVYHNNISK 71
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETD 399
G + G + L L+++ + + Y+S + L ++I N+ I + GAE
Sbjct: 72 EGAKFI-GEMTQLTYLNVNTNNVGELGAKYISKLNQLITLNIGLNS-----IGEQGAE-- 123
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+ + L LN+ + + +S K+LI L+ L D + +S L+
Sbjct: 124 ------YISEMKQLTDLNIYSCNIGNRGANHISRMKQLISLNTGRNGLDDEGVKYISELN 177
Query: 460 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA-ILQFCKMHPRIEV 513
+L L+I D+ ++ GL + + LD+ ++ E A I+ K R+++
Sbjct: 178 QLNFLNIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIISRMKQLTRLDI 232
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N+V Y+ L +LN+ + ++ M L +L++ C + + G H
Sbjct: 91 NNVGELGAKYISKLNQLITLNIG-LNSIGEQGAEYISEMKQLTDLNIYSC-NIGNRGANH 148
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L GL +G+ +S L L+ L++ +++ L + + ++ +LD+
Sbjct: 149 ISRMKQLISLNTGRNGLDDEGVKYISELNQLNFLNIADSNISEEGLNYISGMKQIIHLDI 208
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + + GA ++ +L+ L+++
Sbjct: 209 SNNFIDDEGAEIISRMKQLTRLDIS 233
>gi|290979547|ref|XP_002672495.1| predicted protein [Naegleria gruberi]
gi|284086072|gb|EFC39751.1| predicted protein [Naegleria gruberi]
Length = 665
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 117/228 (51%), Gaps = 19/228 (8%)
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+T VL+++ L K+ Y+D+ ++ + GA+++ +L++L++++TG++ S +
Sbjct: 398 ITHEVLQNITKLEKVNYVDIAAIRIGDEGASMIGQMKQLTYLDISFTGISYNGMRSIGQL 457
Query: 236 LNLSNCTIDSILEGNEN-KAP-----------LAKISLAGTTF--INEREAFLYIETSLL 281
NL+ S + EN AP L K++ T+ I + + E L
Sbjct: 458 TNLTQLIFSS--DDYENYSAPKGVTVAIHLRNLKKLTHLDITYNEIGDEGSQFISELLNL 515
Query: 282 SFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
++L++ N+ L F +++++ L HL++S++ +S++ + C NL +L NT +
Sbjct: 516 TYLEMPNNQLRNEGFKMISKLENLTHLNISNNDFNCESMKHL-CELKNLTSLEAFNTGIT 574
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
S V ++A HL L L LS I + Y+S + L+ + ++ T++
Sbjct: 575 SNDVKLIANHLKYLTELDLSCNDIGNEGAKYVSELKQLQSLQLAQTNL 622
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E M +L + L SL + ++ + L ELDLS C + + G K+
Sbjct: 547 NDFNCESMKHLCELKNLTSLEAFNTGITSNDVKLIANHLKYLTELDLS-CNDIGNEGAKY 605
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L+ L L++T L ++G+ L L L+ LD+ + + L + +LE L +
Sbjct: 606 VSELKQLQSLQLAQTNLDSEGVKYLVRLDQLTDLDVSENSIDAERCKYLNEMKQLEELSI 665
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 122/322 (37%), Gaps = 92/322 (28%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
+++T L +T + + +D++ +++ D G + + L L +S TG++ +G+ +
Sbjct: 396 KKITHEVLQNITKLEKVNYVDIA-AIRIGDEGASMIGQMKQLTYLDISFTGISYNGMRSI 454
Query: 161 SSLQNLSVLDLG-----------GLPVTDLVLRSLQVLTKLE------------------ 191
L NL+ L G+ V + LR+L+ LT L+
Sbjct: 455 GQLTNLTQLIFSSDDYENYSAPKGVTVA-IHLRNLKKLTHLDITYNEIGDEGSQFISELL 513
Query: 192 ---YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--------KLPNISSLECLNLSN 240
YL++ +Q+ N G ++ L+ LN++ +L N++SLE N
Sbjct: 514 NLTYLEMPNNQLRNEGFKMISKLENLTHLNISNNDFNCESMKHLCELKNLTSLEAFNTGI 573
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
+ D L N +
Sbjct: 574 TSNDVKLIAN------------------------------------------------HL 585
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
K L LDLS + IG++ + V+ + L++L L+ T S GV L L L L +S
Sbjct: 586 KYLTELDLSCNDIGNEGAKYVSEL-KQLQSLQLAQTNLDSEGVKYLV-RLDQLTDLDVSE 643
Query: 361 TQIDDYAISYMSMMPSLKFIDI 382
ID Y++ M L+ + I
Sbjct: 644 NSIDAERCKYLNEMKQLEELSI 665
>gi|290999929|ref|XP_002682532.1| predicted protein [Naegleria gruberi]
gi|284096159|gb|EFC49788.1| predicted protein [Naegleria gruberi]
Length = 339
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 144/328 (43%), Gaps = 39/328 (11%)
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
HL + L+ L + + + +G+ +S L+ L+ LD+ + + + L L +L L+
Sbjct: 46 HLSGLKQLKSLHIYGSQIRGEGVRYISELKQLTNLDIRSHNIFHIGAKYLSELKQLTTLN 105
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNEN 252
++G+ + +G+ + +L+ L +A GV +S L+ L+N I GNE
Sbjct: 106 IYGNHIGAKGSKYISELNQLTTLFIAENSIGVEGAKYLSELK--QLTNLGISVNWLGNEG 163
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSS 310
A ++KI L+ LD+S++ + L ++K L L++S
Sbjct: 164 LAYVSKI-------------------KQLTILDISHNDIGAEGGKHLGELKQLTLLNISH 204
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+ I D+ +E + + L L ++ + G L+ L L L++S +I D Y
Sbjct: 205 NKIQDEGLENIGKL-KQLTTLIINQNDIGAEGAQYLS-ELKQLTFLNISDNRIGDEGSKY 262
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
+ + L + I++ DI + GA+ L++L L LN+ + D
Sbjct: 263 IGELKQLVDLYINDNDIG----EEGAK--------YLRDLKQLIYLNVGGNEFGDEGAKY 310
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSL 458
+S K+L L + N S+ D LS +
Sbjct: 311 ISELKQLTKLDINNNSIGDEGTKHLSEM 338
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 137/330 (41%), Gaps = 49/330 (14%)
Query: 175 PVTDLVLR--------SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAW 221
+T LV+R L L +L+ L ++GSQ+ G + +L+ L N+
Sbjct: 30 SLTKLVIRIEEEEEVHHLSGLKQLKSLHIYGSQIRGEGVRYISELKQLTNLDIRSHNIFH 89
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 281
G L + L LN+ GN I G+ +I+E T+L
Sbjct: 90 IGAKYLSELKQLTTLNIY---------GNH-------IGAKGSKYISELNQL----TTL- 128
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
F+ ++ + +L+++K L +L +S + +G++ + V+ + L L++S+ +
Sbjct: 129 -FIAENSIGVEGAKYLSELKQLTNLGISVNWLGNEGLAYVSKI-KQLTILDISHNDIGAE 186
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
G G G L L +L++S +I D + + + L + I+ DI GAE
Sbjct: 187 G-GKHLGELKQLTLLNISHNKIQDEGLENIGKLKQLTTLIINQNDI-------GAEGAQY 238
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
LS L L LN+ ++ D + K+L+ L + + + + L L +L
Sbjct: 239 LS-----ELKQLTFLNISDNRIGDEGSKYIGELKQLVDLYINDNDIGEEGAKYLRDLKQL 293
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
L++ + G + L LD++
Sbjct: 294 IYLNVGGNEFGDEGAKYISELKQLTKLDIN 323
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G K+L + L L +S L +G+A +S ++ L++LD+ + + L L +L
Sbjct: 139 GAKYLSELKQLTNLGISVNWLGNEGLAYVSKIKQLTILDISHNDIGAEGGKHLGELKQLT 198
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSI 246
L++ +++ + G + +L+ L ++ G L + L LN+S+ I
Sbjct: 199 LLNISHNKIQDEGLENIGKLKQLTTLIINQNDIGAEGAQYLSELKQLTFLNISDNRI--- 255
Query: 247 LEGNENKAPLAKISLAGTTFINE----REAFLYI-ETSLLSFLDVSNSSLSRFC--FLTQ 299
G+E + ++ +IN+ E Y+ + L +L+V + ++++
Sbjct: 256 --GDEGSKYIGELKQLVDLYINDNDIGEEGAKYLRDLKQLIYLNVGGNEFGDEGAKYISE 313
Query: 300 MKALEHLDLSSSMIGDDSVEMVA 322
+K L LD++++ IGD+ + ++
Sbjct: 314 LKQLTKLDINNNSIGDEGTKHLS 336
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 81 EWMAYLGAFRYLRSLNVA--DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
E +AY+ + L L+++ D L L +T L ++S K+ D G++++
Sbjct: 162 EGLAYVSKIKQLTILDISHNDIGAEGGKHLGELKQLTLL---NISHN-KIQDEGLENIGK 217
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ L L +++ + A+G LS L+ L+ L++ + D + + L +L L + +
Sbjct: 218 LKQLTTLIINQNDIGAEGAQYLSELKQLTFLNISDNRIGDEGSKYIGELKQLVDLYINDN 277
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
+ GA L+ +L +LN+ G + + L L+++N +I
Sbjct: 278 DIGEEGAKYLRDLKQLIYLNVGGNEFGDEGAKYISELKQLTKLDINNNSI 327
>gi|300693896|ref|YP_003749869.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299075933|emb|CBJ35242.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
solanacearum PSI07]
Length = 1002
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 170/394 (43%), Gaps = 50/394 (12%)
Query: 117 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
++ LDLS C V+ AG+ +L LE L LS+T + G LL+S +L+ L+L G
Sbjct: 576 VRHLDLSGCTGTAVSGAGLAYLAG-RKLESLDLSDTPIGDRGAQLLASSTSLTSLNLSGN 634
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 229
++D + T L L+L G+ +S+ GA L L+ L+++ TGV L +
Sbjct: 635 EISDAGAAAFADNTSLTSLNLRGNHISDAGAEALGRNTVLTSLDVSANPIGNTGVQALAS 694
Query: 230 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
SL LNL + I D +E + L + ++ F + A L +L S L ++
Sbjct: 695 SRSLTSLNLCSTWIEDEGVEALASNTVLRSLDISHNRFGAQFAAELAQNRTLAS-LKANH 753
Query: 289 SSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
SL+ L +++L L+LSS++I D V+ + A+LR+L+LS G+G L
Sbjct: 754 CSLTNNVAQQLASIRSLTALELSSNLIDDAGVQAI-VRNASLRSLDLSQNPI---GLGGL 809
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
+A++ + SL I D G +
Sbjct: 810 -------------------HALALSRTLTSLDVSCIGCGDRGGLV--------------- 835
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L L L L ++ + L+ + LI L L ++ V+ L+ +L +L+
Sbjct: 836 LSKSRSLTLLKLGSNGIASEGVQILAANRSLISLDLSGNTIDVVAARALAKNPRLASLNA 895
Query: 467 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
L ++ + + RSL LD+ L + A
Sbjct: 896 SSCGLDDAAVSALAESRSLTSLDVSKNRLFSPGA 929
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 169/430 (39%), Gaps = 71/430 (16%)
Query: 92 LRSLNVADCR--RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+R L+++ C V+ + L L G L+ LDLS + D G + L S ++L L LS
Sbjct: 576 VRHLDLSGCTGTAVSGAGLAYLAGRK-LESLDLSD-TPIGDRGAQLLASSTSLTSLNLSG 633
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ G A + +L+ L+L G ++D +L T L LD+ + + N G L
Sbjct: 634 NEISDAGAAAFADNTSLTSLNLRGNHISDAGAEALGRNTVLTSLDVSANPIGNTGVQALA 693
Query: 210 MFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 264
L+ LNL T GV L + + L L++S+ G
Sbjct: 694 SSRSLTSLNLCSTWIEDEGVEALASNTVLRSLDISHNRF-------------------GA 734
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVA 322
F E + L+ L ++ SL+ L +++L L+LSS++I D V+ +
Sbjct: 735 QFAAE-----LAQNRTLASLKANHCSLTNNVAQQLASIRSLTALELSSNLIDDAGVQAI- 788
Query: 323 CVGANLRNLNLSNTRFSSAGVGILA------------------GHL-----PNLEILSLS 359
A+LR+L+LS G+ LA G L +L +L L
Sbjct: 789 VRNASLRSLDLSQNPIGLGGLHALALSRTLTSLDVSCIGCGDRGGLVLSKSRSLTLLKLG 848
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
I + ++ SL +D+S I V++ AL L LN
Sbjct: 849 SNGIASEGVQILAANRSLISLDLSGNTID------------VVAARALAKNPRLASLNAS 896
Query: 420 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
+ DA + L+ + L L + L L+ LT+L+I + G +
Sbjct: 897 SCGLDDAAVSALAESRSLTSLDVSKNRLFSPGARALAGNRVLTSLNISHNRIGFHGAAAL 956
Query: 480 KPPRSLKLLD 489
SL LD
Sbjct: 957 AESTSLTFLD 966
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN---TRFSSAGVGILAGHL 350
F L ALE L S G+ ++ + + ++R+L+LS T S AG+ LAG
Sbjct: 546 FSRLGNYSALESL----SFHGNLTIADLKALPPSVRHLDLSGCTGTAVSGAGLAYLAGR- 600
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
LE L LS T I D ++ SL +++S +I GA A +
Sbjct: 601 -KLESLDLSDTPIGDRGAQLLASSTSLTSLNLSGNEIS----DAGA--------AAFADN 647
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L LNL +SDA L L L + + + + L+S LT+L++
Sbjct: 648 TSLTSLNLRGNHISDAGAEALGRNTVLTSLDVSANPIGNTGVQALASSRSLTSLNLCSTW 707
Query: 471 LTNSGLGSFKPPRSLKLLDL 490
+ + G+ + L+ LD+
Sbjct: 708 IEDEGVEALASNTVLRSLDI 727
>gi|149174147|ref|ZP_01852775.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
gi|148847127|gb|EDL61462.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
Length = 476
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 113/261 (43%), Gaps = 55/261 (21%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
VTD ++ + + LWLS + +T GI L L L+L G VTD L L+ L
Sbjct: 267 VTDQILRDFNYWNKVSGLWLSRSKVTDAGIEYLRGATRLYSLNLSGTEVTDATLEHLKGL 326
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG--VTKLPNISSLECLNLSNCTIDS 245
+L ++L G+QVS RG VL++ + +A+ G V KL N + L LS+ +
Sbjct: 327 PELHSVNLRGTQVSPRG--VLELIASSDSMQIAFPGGWVWKLENAHGFQ-LKLSSPAVTG 383
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L + L GT + Y++ ++ D +SL F
Sbjct: 384 EL-----------LKLFGTVRVQA-----YLDLDGIALTDEGLASLGGF----------- 416
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
+LR L +SNT+ SSAG+ LAG L +L L L G+ + D
Sbjct: 417 --------------------EDLRTLRISNTQISSAGLNHLAG-LASLRELDLRGSAVAD 455
Query: 366 YAISYMS-MMPSLKFIDISNT 385
I+ + +P+ K ID + T
Sbjct: 456 EDINKLQRALPNCK-IDWNET 475
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--K 388
L LS ++ + AG+ L G L L+LSGT++ D + ++ +P L +++ T + +
Sbjct: 284 LWLSRSKVTDAGIEYLRG-ATRLYSLNLSGTEVTDATLEHLKGLPELHSVNLRGTQVSPR 342
Query: 389 GFIQQVGAETDLVLSLTA-----LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
G ++ + + + ++ L+N H +L L V+ L T + +L L
Sbjct: 343 GVLELIASSDSMQIAFPGGWVWKLENA-HGFQLKLSSPAVTGELLKLFGTVRVQAYLDLD 401
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 503
+LTD L L L L I + ++++GL SL+ LDL G + ED I +
Sbjct: 402 GIALTDEGLASLGGFEDLRTLRISNTQISSAGLNHLAGLASLRELDLRGSAVADED-INK 460
Query: 504 FCKMHPRIEV-WHE 516
+ P ++ W+E
Sbjct: 461 LQRALPNCKIDWNE 474
>gi|290998894|ref|XP_002682015.1| predicted protein [Naegleria gruberi]
gi|284095641|gb|EFC49271.1| predicted protein [Naegleria gruberi]
Length = 413
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 22/231 (9%)
Query: 258 KISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 316
+I + G +I+E + TSL +S +++S+ ++++MK L L + ++ IGD+
Sbjct: 144 RIGVEGVKYISEMKQL----TSLNISEIEISDEGAK---YISEMKQLTSLYIHNNEIGDE 196
Query: 317 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 376
+ ++ + L +LN+ S G ++ + L LS+ +I D Y+S M
Sbjct: 197 GSKHISEM-KQLTSLNIGCNEISDEGAKHIS-EMNQLISLSIGYNRIGDEGFKYISEMKQ 254
Query: 377 LKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVS 424
L +DI++ +I +I ++ T L + + + L L L++ +T++S
Sbjct: 255 LTSLDITDDEIGDEGAKYISEMKQLTSLNIGFNEIGDEGAKYISELKQLTSLDISETEIS 314
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
D +S K+LI L++ ++D +S L +LT+L I D + N G
Sbjct: 315 DEGAKYISEMKQLIWLTIGYNEISDKGAKYISELKQLTSLDITDNKIGNEG 365
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E Y+ + L SL++ D + ++ M L L++ ++ D G
Sbjct: 237 GYNRIGDEGFKYISEMKQLTSLDITD-DEIGDEGAKYISEMKQLTSLNIG-FNEIGDEGA 294
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K++ + L L +SET ++ +G +S ++ L L +G ++D + + L +L L
Sbjct: 295 KYISELKQLTSLDISETEISDEGAKYISEMKQLIWLTIGYNEISDKGAKYISELKQLTSL 354
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
D+ +++ N GA + +L LN+ + +
Sbjct: 355 DITDNKIGNEGAKYISEMNQLISLNIGYNRI 385
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 134/319 (42%), Gaps = 63/319 (19%)
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G+K++ + L L +SE ++ +G +S ++ L+ L + + D + + + +L
Sbjct: 149 GVKYISEMKQLTSLNISEIEISDEGAKYISEMKQLTSLYIHNNEIGDEGSKHISEMKQLT 208
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE 251
L++ +++S+ GA + +L L++ + +
Sbjct: 209 SLNIGCNEISDEGAKHISEMNQLISLSIGYNRIGD------------------------- 243
Query: 252 NKAPLAKISLAGTTFINEREAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDL 308
E F YI E L+ LD+++ + ++++MK L L++
Sbjct: 244 -------------------EGFKYISEMKQLTSLDITDDEIGDEGAKYISEMKQLTSLNI 284
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ IGD+ + ++ + L +L++S T S G ++ + L L++ +I D
Sbjct: 285 GFNEIGDEGAKYISEL-KQLTSLDISETEISDEGAKYIS-EMKQLIWLTIGYNEISDKGA 342
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
Y+S + L +DI++ ++G E +S +N L LN+ ++ D
Sbjct: 343 KYISELKQLTSLDITDN-------KIGNEGAKYIS-----EMNQLISLNIGYNRIGDEGA 390
Query: 429 FPLSTFKELIHLSLRNASL 447
+S K+L SLR SL
Sbjct: 391 KYISEMKQLT--SLRQISL 407
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/270 (16%), Positives = 116/270 (42%), Gaps = 44/270 (16%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ E Y+ + L SL + + + ++ M L L++ C +++D G KH+
Sbjct: 169 ISDEGAKYISEMKQLTSLYIHN-NEIGDEGSKHISEMKQLTSLNIG-CNEISDEGAKHIS 226
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
++ L L + + +G +S ++ L+ LD+ + D + + + +L L++
Sbjct: 227 EMNQLISLSIGYNRIGDEGFKYISEMKQLTSLDITDDEIGDEGAKYISEMKQLTSLNIGF 286
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+++ + GA + +L+ L+++ T
Sbjct: 287 NEIGDEGAKYISELKQLTSLDISET----------------------------------- 311
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
+IS G +I+E + +++ + + ++S+ +++++K L LD++ + IG++
Sbjct: 312 EISDEGAKYISEMKQLIWL---TIGYNEISDKGAK---YISELKQLTSLDITDNKIGNEG 365
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILA 347
+ ++ + L +LN+ R G ++
Sbjct: 366 AKYISEMNQ-LISLNIGYNRIGDEGAKYIS 394
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
S+ + F+++MK L LD+ S+ IG + V+ ++
Sbjct: 122 SVDQLKFISEMKQLTSLDIYSNRIGVEGVKYIS--------------------------E 155
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
+ L L++S +I D Y+S M L + I N +I G E +S
Sbjct: 156 MKQLTSLNISEIEISDEGAKYISEMKQLTSLYIHNNEI-------GDEGSKHIS-----E 203
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
+ L LN+ ++SD +S +LI LS+ + D +S + +LT+L I D
Sbjct: 204 MKQLTSLNIGCNEISDEGAKHISEMNQLISLSIGYNRIGDEGFKYISEMKQLTSLDITDD 263
Query: 470 VLTNSGLGSFKPPRSLKLLDL 490
+ + G + L L++
Sbjct: 264 EIGDEGAKYISEMKQLTSLNI 284
>gi|413937766|gb|AFW72317.1| hypothetical protein ZEAMMB73_434085 [Zea mays]
Length = 403
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N+V AE M L +L++ C ++ L L +T L+ L++ C + D+ +K+
Sbjct: 196 NAVTAEGMRAFANLVNLLNLDLEGCLKI-HGGLIHLKDLTKLESLNMRYCNYIADSDIKY 254
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L ++ L+ L LS +T G++ + LQ L+ L+L G PVT L ++ L+ L L+L
Sbjct: 255 LTDLTNLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEGCPVTAACLEAISGLSSLVLLNL 314
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI 243
+ + G + RL LNL + +T L + SLE LNL +C I
Sbjct: 315 NRCGIYDDGCENFEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSCKI 367
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L L SLN+ C + S + LT +T LK+L LS C K+TD G+ ++ + L
Sbjct: 227 LIHLKDLTKLESLNMRYCNYIADSDIKYLTDLTNLKDLQLS-CCKITDLGVSYIRGLQKL 285
Query: 143 EKLWLSETGLTA------------------------DGIALLSSLQNLSVLDLGGLPVTD 178
L L +TA DG L+ L VL+LG +TD
Sbjct: 286 THLNLEGCPVTAACLEAISGLSSLVLLNLNRCGIYDDGCENFEGLKRLKVLNLGFNYITD 345
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
L L+ L LE L+L ++ + G + LK L L L+ T V
Sbjct: 346 ACLVHLKELISLESLNLDSCKIGDDGLSHLKGLVLLQSLELSDTEV 391
>gi|357615345|gb|EHJ69606.1| hypothetical protein KGM_07261 [Danaus plexippus]
Length = 438
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 92 LRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
L L + DC+R+T AL A TG+ LK ++LS CV VTDAG++HL + LE + L
Sbjct: 250 LEHLGLQDCQRLTDEALKHAATGLPKLKSINLSFCVAVTDAGLRHLARLPHLEDVNLRAC 309
Query: 151 -GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV---SNRGAA 206
G++ G+A L+ L LD + + D G + + G +
Sbjct: 310 DGVSDAGVAHLAESGRLRALD-------------------VSFCDKVGDEALSHATLGLS 350
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT------IDSILEGNENKAPLAKIS 260
L+ LS L G+ ++ +S LE LN+ CT + ++ EG +N L I
Sbjct: 351 GLRCLS-LSACRLTDEGLERVARLSQLETLNIGQCTQVTDRGLRALGEGLKN---LKAID 406
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVS 287
L G T I ++ LS L++
Sbjct: 407 LYGCTCITHEGLDHIVKLPRLSVLNLG 433
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 61 EVFKHNAEAI-ELRGEN-----SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGM 114
E KH A + +L+ N +V + +L +L +N+ C V+ + + L
Sbjct: 264 EALKHAATGLPKLKSINLSFCVAVTDAGLRHLARLPHLEDVNLRACDGVSDAGVAHLAES 323
Query: 115 TCLKELDLSRCVKVTDAGMKH-LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
L+ LD+S C KV D + H L +S L L LS LT +G+ ++ L L L++G
Sbjct: 324 GRLRALDVSFCDKVGDEALSHATLGLSGLRCLSLSACRLTDEGLERVARLSQLETLNIGQ 383
Query: 174 LP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
VTD LR+L + L L+ +DL+G + +++ G + PRLS LNL
Sbjct: 384 CTQVTDRGLRALGEGLKNLKAIDLYGCTCITHEGLDHIVKLPRLSVLNLG 433
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 139/338 (41%), Gaps = 78/338 (23%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+ A L SL+++ C VT +AL + T + LK LDLS C +VTD+ +
Sbjct: 134 VAALPGLESLSLSGCYSVTDAALASAFATELPALKRLDLSLCKQVTDSSLGR-------- 185
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGG-LPVTD----LVLRSLQVLTKLEYLDLWGS 198
+ SL+NL L+LGG VTD L+ L+ L +L W
Sbjct: 186 ---------------IAQSLKNLEELELGGCCNVTDTGLLLIAWGLRKLRRLNLRSCW-- 228
Query: 199 QVSNRGAAVL------KMFPRLSFLNL-------------AWTGVTKLPNISSLECLNLS 239
V++ G A L + P L L L A TG+ KL +I NLS
Sbjct: 229 HVNDDGIAHLCGGGEARGTPELEHLGLQDCQRLTDEALKHAATGLPKLKSI------NLS 282
Query: 240 NC--TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 297
C D+ L L ++L +++ E+ L LDVS FC
Sbjct: 283 FCVAVTDAGLRHLARLPHLEDVNLRACDGVSDAGVAHLAESGRLRALDVS------FCDK 336
Query: 298 TQMKALEH----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGIL 346
+AL H L LS+ + D+ +E VA + + L LN+ T+ + G+ L
Sbjct: 337 VGDEALSHATLGLSGLRCLSLSACRLTDEGLERVARL-SQLETLNIGQCTQVTDRGLRAL 395
Query: 347 AGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L NL+ + L G T I + ++ +P L +++
Sbjct: 396 GEGLKNLKAIDLYGCTCITHEGLDHIVKLPRLSVLNLG 433
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 41/160 (25%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADC 100
+ D+ LRHL R P L E + LR + V +A+L LR+L+V+ C
Sbjct: 287 VTDAGLRHLAR----LPHL--------EDVNLRACDGVSDAGVAHLAESGRLRALDVSFC 334
Query: 101 RRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE---------- 149
+V AL A G++ L+ L LS C ++TD G++ + +S LE L + +
Sbjct: 335 DKVGDEALSHATLGLSGLRCLSLSAC-RLTDEGLERVARLSQLETLNIGQCTQVTDRGLR 393
Query: 150 -----------------TGLTADGIALLSSLQNLSVLDLG 172
T +T +G+ + L LSVL+LG
Sbjct: 394 ALGEGLKNLKAIDLYGCTCITHEGLDHIVKLPRLSVLNLG 433
>gi|343423407|emb|CCD18182.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 518
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 183/449 (40%), Gaps = 62/449 (13%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRV--TSSALWALTGMT 115
SL EV HNA AI ++G F + L V RV T L +LT
Sbjct: 110 SLEEVALHNASAI-------------VHIGRFGRMPCLRVLTLHRVGVTDDFLCSLTTSG 156
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L L+L+ C ++TD ++ L SI TLE++ LS + G+ L SL L L+L
Sbjct: 157 SLTHLNLTECSRLTD--VEPLASIKTLEQVNLSGSFPGVRGLGALGSLPRLRELNLKHTA 214
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
VTD L++L L L L + T VT L ISSL+
Sbjct: 215 VTDDCLKTLSASKTLVRLFLGDCR--------------------RLTDVTPLVKISSLQV 254
Query: 236 LNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 294
++LS+C+ I + G L +SL GT +E+ L SL S L+
Sbjct: 255 VDLSDCSGITKGMGGFGTLPGLYLLSLTGTALTDEQLQELCASQSLESLSIKRCKLLTDV 314
Query: 295 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA---NLRNLNLSNTRFSSAGVGILAGHLP 351
L + L LD+S D V C + LR+L ++ TR ++ + +A
Sbjct: 315 GVLGFVTTLRELDMSEC----DGVARGFCSFSALRELRSLYMTFTRVTNECLCEIA-KCT 369
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 411
L LS++G + ++ +S + + ++ N ++ I L L L
Sbjct: 370 QLVKLSVAGCK----KLTDISCLAQVHTLEDLNVNMCEHIDD---------GLGVLGGLE 416
Query: 412 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV 470
L L + T V + L + K L L +TDVS L++ L L++
Sbjct: 417 ELRTLRMSSTAVGNDELRLVCKSKTLERSELEGCERITDVS--ALAAAQSLMFLNLDKCQ 474
Query: 471 LTNSGLGSFKPPRSLKLLDLHGGWLLTED 499
+G+G +L+++ L G + +D
Sbjct: 475 KVVTGVGELGKLPALRVISLQGATVTEDD 503
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGF-----IQQVGAET 398
G +P L +L+L + D + ++ SL ++++ TD++ ++QV
Sbjct: 129 GRMPCLRVLTLHRVGVTDDFLCSLTTSGSLTHLNLTECSRLTDVEPLASIKTLEQVNLSG 188
Query: 399 DL--VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQL 455
V L AL +L L LNL+ T V+D L LS K L+ L L + LTDV+ L
Sbjct: 189 SFPGVRGLGALGSLPRLRELNLKHTAVTDDCLKTLSASKTLVRLFLGDCRRLTDVT--PL 246
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 505
+S L + + D G+G F L LL L G LT++ + + C
Sbjct: 247 VKISSLQVVDLSDCSGITKGMGGFGTLPGLYLLSLTGTA-LTDEQLQELC 295
>gi|149175637|ref|ZP_01854257.1| putative serine/threonine-protein kinase [Planctomyces maris DSM
8797]
gi|148845622|gb|EDL59965.1| putative serine/threonine-protein kinase [Planctomyces maris DSM
8797]
Length = 718
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
++ E MA L L +L++ DC V AL L G LK LDL +T+AG+ H+
Sbjct: 552 TITREVMAPLKGLAKLETLHLEDCH-VMDDALAPLEGKLTLKTLDLHE-TGLTNAGLSHI 609
Query: 137 LSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
S+ L L L + +T +G+ L++L+ LS ++L L +TD + ++ +L++L++
Sbjct: 610 SSLLNLTHLSLQKNREITDEGLQALANLKKLSSINLDRLNITDEGITFIKHNPRLDWLNI 669
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+Q+S+ +L R+ L L + +T
Sbjct: 670 KDTQISDTSIPLLIKLNRMKNLYLEGSKIT 699
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
++ + L +D +IK Q + E + L+ L LE L+LE V D L P
Sbjct: 530 VTQVQELPVVDFYIREIKFHPQTITREV-----MAPLKGLAKLETLHLEDCHVMDDALAP 584
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLD 489
L L L L LT+ L +SSL LT+LS+ ++ +T+ GL + + L ++
Sbjct: 585 LEGKLTLKTLDLHETGLTNAGLSHISSLLNLTHLSLQKNREITDEGLQALANLKKLSSIN 644
Query: 490 LHGGWLLTEDAILQFCKMHPRIE 512
L L D + F K +PR++
Sbjct: 645 L--DRLNITDEGITFIKHNPRLD 665
>gi|290991518|ref|XP_002678382.1| predicted protein [Naegleria gruberi]
gi|284091994|gb|EFC45638.1| predicted protein [Naegleria gruberi]
Length = 344
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 31/303 (10%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+TS T + L +LD+ ++ D GMK + + L KL + + +GI LS+
Sbjct: 14 ITSKGAEYFTNLKQLIKLDIG-GTEIGDEGMKSIGKMKQLTKLEMCGNKIGDEGIKALSN 72
Query: 163 LQ-NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---- 217
L +L+ L + + ++L+ LT+L YLD+ +++ N+GA + P+L+ L
Sbjct: 73 LNSSLTHLCVRKNNIGQEGAKTLKHLTRLNYLDIRKNKLGNQGAKEISELPQLTRLFICK 132
Query: 218 -NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE----- 271
N+ G + I +L L +S I G + + L + + N R
Sbjct: 133 NNIGDEGAKAIGEIQTLTQLVMSENPIGD--GGAISVSQLRHLKTLCIQWTNVRTEGIKA 190
Query: 272 -------AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
L+I+++ L F D+ + Q+ L L +S + IGD ++++ +
Sbjct: 191 ICNMKQLTCLHIQSNKLGFDDIK--------PIGQLNQLTRLLISDNQIGDSGAKIISEL 242
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
L NL + ++ G L+G + NL L+LSG +I + + +S M L+ + + +
Sbjct: 243 NQ-LTNLRIYDSNIGIEGAKSLSG-MKNLTKLNLSGNKIGNKGLEAISGMLQLQKLSVIH 300
Query: 385 TDI 387
+I
Sbjct: 301 CEI 303
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
+ +MK L L++ + IGD+ ++ ++ + ++L +L + G L HL L L
Sbjct: 46 IGKMKQLTKLEMCGNKIGDEGIKALSNLNSSLTHLCVRKNNIGQEGAKTLK-HLTRLNYL 104
Query: 357 SLSGTQIDDYAISYMSMMPSLK--FIDISNTDIKGF--IQQVGAETDLVLS--------L 404
+ ++ + +S +P L FI +N +G I ++ T LV+S
Sbjct: 105 DIRKNKLGNQGAKEISELPQLTRLFICKNNIGDEGAKAIGEIQTLTQLVMSENPIGDGGA 164
Query: 405 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
++ L HL+ L ++ T V + + K+L L +++ L + + L++LT L
Sbjct: 165 ISVSQLRHLKTLCIQWTNVRTEGIKAICNMKQLTCLHIQSNKLGFDDIKPIGQLNQLTRL 224
Query: 465 SIRDAVLTNSG 475
I D + +SG
Sbjct: 225 LISDNQIGDSG 235
>gi|290994540|ref|XP_002679890.1| predicted protein [Naegleria gruberi]
gi|284093508|gb|EFC47146.1| predicted protein [Naegleria gruberi]
Length = 293
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 134/311 (43%), Gaps = 59/311 (18%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E ++ + L SL+++D + + G + E M
Sbjct: 10 GVNEIGVEGGKFISEIKQLTSLDISDNQ-------IGVEGAKLISE-------------M 49
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K L S++ + G+ +G L+S ++ L+ LD+ G + D ++S+ + +L L
Sbjct: 50 KQLTSLNIFK------NGIGVEGAKLISEMKQLTSLDISGNLIYDEGVKSISEMKQLTSL 103
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE 248
D+ +++ GA ++ +L+ LN++ G + + L L + ID
Sbjct: 104 DISKNEIGVEGAKLISGMKQLTSLNISKNEISDEGAKLISEMKQLTSLTIYKSGIDD--- 160
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS--SLSRFCFLTQMKALEHL 306
G +++E + L+ LD+S++ + F+++MK L L
Sbjct: 161 -------------KGAKYLSEIKQ--------LTSLDISSNPMGVEGAKFISEMKQLTSL 199
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
D+S+++I D+ E ++ + L +LN+SN G +++ + L L + +I D
Sbjct: 200 DISNNLIYDEGAEFISGM-KQLTSLNISNNIILDEGAKLIS-EMKQLTSLDICYNEIGDE 257
Query: 367 AISYMSMMPSL 377
++S M L
Sbjct: 258 GAKFISGMKQL 268
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F++++K L LD+S + IG + ++++ + L +LN+ G +++ + L
Sbjct: 21 FISEIKQLTSLDISDNQIGVEGAKLISEM-KQLTSLNIFKNGIGVEGAKLIS-EMKQLTS 78
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L +SG I D + +S M L +DIS +I G E ++S + L
Sbjct: 79 LDISGNLIYDEGVKSISEMKQLTSLDISKNEI-------GVEGAKLIS-----GMKQLTS 126
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LN+ + ++SD +S K+L L++ + + D LS + +LT+L I + G
Sbjct: 127 LNISKNEISDEGAKLISEMKQLTSLTIYKSGIDDKGAKYLSEIKQLTSLDISSNPMGVEG 186
Query: 476 LGSFKPPRSLKLLDLHGGWLLTEDA 500
+ L LD+ + E A
Sbjct: 187 AKFISEMKQLTSLDISNNLIYDEGA 211
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
+++MK L LD+S + IG + ++++ + L +LN+S S G +++ + L L
Sbjct: 94 ISEMKQLTSLDISKNEIGVEGAKLISGM-KQLTSLNISKNEISDEGAKLIS-EMKQLTSL 151
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKG--FIQQVGAETDLVLS--------L 404
++ + IDD Y+S + L +DIS+ ++G FI ++ T L +S
Sbjct: 152 TIYKSGIDDKGAKYLSEIKQLTSLDISSNPMGVEGAKFISEMKQLTSLDISNNLIYDEGA 211
Query: 405 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
+ + L LN+ + D +S K+L L + + D +S + +LT+L
Sbjct: 212 EFISGMKQLTSLNISNNIILDEGAKLISEMKQLTSLDICYNEIGDEGAKFISGMKQLTSL 271
Query: 465 SI 466
+
Sbjct: 272 YV 273
>gi|423616588|ref|ZP_17592422.1| hypothetical protein IIO_01914, partial [Bacillus cereus VD115]
gi|401258404|gb|EJR64590.1| hypothetical protein IIO_01914, partial [Bacillus cereus VD115]
Length = 590
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKILYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLRS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDLSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRDA 469
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ V L + N++IL ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKILYVAGNQIED---------------------------------- 322
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PL + K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLRSLKNVTYLTL--------AGNQVEDIT 368
Query: 460 KLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|44888782|gb|AAS48163.1| LLR protein WM1.1 [Aegilops tauschii]
Length = 1032
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 177/445 (39%), Gaps = 88/445 (19%)
Query: 136 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
LLS+ L+ L LS G + LL S+ NL L+L G+P T + L L+KL+Y
Sbjct: 118 LLSLKRLKHLDLSMNCLLGTNSQIPHLLGSMGNLRYLNLSGIPFTGRMPSHLGNLSKLQY 177
Query: 193 LDL-WGSQVSNRGAAVLKMFPRLSFLNL---AWTGVTKLPN----ISSLECLNLSNCTID 244
LDL + + + L P L FL++ G+ P+ I SL ++LSNC +D
Sbjct: 178 LDLGYCPAMYSTDITWLTKLPFLKFLSMRGVMLPGIADWPHTLNMIPSLRVIDLSNCLLD 237
Query: 245 SILEG--NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRF------- 294
+ + N L K+ L F + + + + + L +LD+ N+ L +F
Sbjct: 238 YANQSLQHVNLTKLEKLDLFNNYFEHSLASGWFWKATSLKYLDLGNNRLFGQFPDTLGNM 297
Query: 295 -------------------CFLTQMKALEHLDLSSSMI-GDDSVEMVA---CVGANLRNL 331
L + LE +DLS + I GD +V M + C L+ +
Sbjct: 298 TNLQVLDISENWNPHMMMAGNLENLCGLEIIDLSYNYINGDIAVLMESLPQCTRKKLQEM 357
Query: 332 NLSNTRFSSAGVGILAGHLPN-------LEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
+L F+ G LPN L ILSLSG + ++ + L +++ +
Sbjct: 358 DLRYNNFT--------GTLPNLVSDFTRLRILSLSGNNLVGSIPPWLVNLTRLTTLELFS 409
Query: 385 TDIKGFIQQVGAETDLVLSLTALQN------------LNHLERLNLEQTQVSDATLFPLS 432
+ G I + SL N L +L L+L ++++ +
Sbjct: 410 NHLTGSIPPWLGNLTCLTSLELSDNLLTGSIPAEFGKLMYLTILDLSSNHLNESVPAEIG 469
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG---SFKPPRSLKLLD 489
+ LI L L N S T V + L+ LT+L D L N + ++ P +L
Sbjct: 470 SLVNLIFLDLSNNSFTGVITEE--HLANLTSLKQIDLSLNNFKIALNSDWRAPSTL---- 523
Query: 490 LHGGWLLTEDAILQFCKMHPRIEVW 514
E A C+M P W
Sbjct: 524 --------ESAWFASCQMGPLFPPW 540
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 32/297 (10%)
Query: 101 RRVTSSALWALTGMTCLKELDLSR--CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
+T S L +TCL L+LS A L+ ++ L+ LS L A
Sbjct: 410 NHLTGSIPPWLGNLTCLTSLELSDNLLTGSIPAEFGKLMYLTILD---LSSNHLNESVPA 466
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
+ SL NL LDL T ++ L LT L+ +DL ++N A L
Sbjct: 467 EIGSLVNLIFLDLSNNSFTGVITEEHLANLTSLKQIDL---SLNNFKIA----------L 513
Query: 218 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 277
N W + P S+LE ++C + + + + + ++ T+ E + +
Sbjct: 514 NSDW----RAP--STLESAWFASCQMGPLFPPWLQQLKITALDISTTSLKGEFPDWFWSA 567
Query: 278 TSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
S +++LD+SN+ +S A E L L S+ + + + N+ L++SN
Sbjct: 568 FSNVTYLDISNNQISGNLPAHMDSMAFEKLYLRSNRL----TGPIPTLPTNITLLDISNN 623
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 393
FS L P LEIL + QI Y + + L ++D+SN ++G + Q
Sbjct: 624 TFSETIPSNLVA--PRLEILCMHSNQIGGYIPESICKLEQLIYLDLSNNILEGEVPQ 678
>gi|168704644|ref|ZP_02736921.1| hypothetical protein GobsU_34225 [Gemmata obscuriglobus UQM 2246]
Length = 952
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 153/342 (44%), Gaps = 64/342 (18%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L +T L+ELDLS C V+D + L +++ L L LS AD ++ L++L L LD
Sbjct: 651 LAPLTALEELDLSGCAGVSD--LSPLANLTALRFLDLSGCAGGAD-LSPLANLTALRFLD 707
Query: 171 LGGLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA----WTGV 224
L G V+DL L LT LE L+L G + VS+ + L L LNL+ W +
Sbjct: 708 LSGCAGVSDLA--PLANLTALEGLNLRGCAGVSD--LSPLANLTGLRHLNLSGCAGWADL 763
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+ L N++ L LNL+ CT G + +PLA + + L L
Sbjct: 764 SPLANLTGLRHLNLNGCT------GVSDLSPLAPL-------------------TALEEL 798
Query: 285 DVSN-SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
D+S + +S L + ALE LDLS D + LR L+LS AGV
Sbjct: 799 DLSGCAGVSDLSPLANLTALEGLDLSGCAGVSDLSPLAPHTA--LRFLDLSGC----AGV 852
Query: 344 GILAGHLPN--LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
L+ P+ L L LSG +S +S + +L ++ + D+ G V
Sbjct: 853 SCLSPLAPHTALRFLDLSGCA----GVSDLSPLANLTALE--DLDLSGCAG--------V 898
Query: 402 LSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSL 442
L+ L NL LE L+L T V D L PL+ L L L
Sbjct: 899 SDLSPLANLTALEGLDLSGCTGVLD--LSPLAPLTALQFLDL 938
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 149/314 (47%), Gaps = 33/314 (10%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L L L+++ C V S L L +T L+ LDLS C D + L +++ L
Sbjct: 648 LSPLAPLTALEELDLSGCAGV--SDLSPLANLTALRFLDLSGCAGGAD--LSPLANLTAL 703
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVS 201
L LS +D +A L++L L L+L G V+D L L LT L +L+L G
Sbjct: 704 RFLDLSGCAGVSD-LAPLANLTALEGLNLRGCAGVSD--LSPLANLTGLRHLNLSGCA-- 758
Query: 202 NRGAAVLKMFPRLS---FLNL-AWTGV---TKLPNISSLECLNLSNCTIDSILEGNENKA 254
G A L L+ LNL TGV + L +++LE L+LS C S L N
Sbjct: 759 --GWADLSPLANLTGLRHLNLNGCTGVSDLSPLAPLTALEELDLSGCAGVSDLSPLANLT 816
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMI 313
L + L+G +++ + L FLD+S + +S L AL LDLS
Sbjct: 817 ALEGLDLSGCAGVSDLSPL--APHTALRFLDLSGCAGVSCLSPLAPHTALRFLDLSGCA- 873
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLSG-TQIDDYAISY 370
G + +A + A L +L+LS AGV L+ +L LE L LSG T + D +S
Sbjct: 874 GVSDLSPLANLTA-LEDLDLSGC----AGVSDLSPLANLTALEGLDLSGCTGVLD--LSP 926
Query: 371 MSMMPSLKFIDISN 384
++ + +L+F+D+
Sbjct: 927 LAPLTALQFLDLGG 940
>gi|421888173|ref|ZP_16319281.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum K60-1]
gi|378966462|emb|CCF96029.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum K60-1]
Length = 466
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 9/295 (3%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L L+V CR SA L G L LD+ R + DAG+ L L S G
Sbjct: 175 LDRLDVGGCRLNADSARL-LAGHPTLTALDIRRNA-IGDAGVAAFARNKKLTALNASSNG 232
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ G+ L++ ++ LD+ + D R+L T L LD S + G L
Sbjct: 233 IGPAGVRALAANTTIATLDISDNEIGDEGARALAGHTALTKLDASDSGIGPEGTRALATS 292
Query: 212 PRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
L+ L+L++ G L ++L L++ + + +
Sbjct: 293 MTLASLDLSYNEIGAEGAEALGENTTLTTLHVCGNALGHREAALLAASATLTTLDLSSNA 352
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
I A + + L+ L++SN+ + R L LD+S++ IGD + +++A
Sbjct: 353 IGSAGARAFGTNTTLTKLNLSNNGIERVSAWANNSKLTKLDISNNRIGDAAAQVLADS-R 411
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 381
L LN S+ R AG LAG+ L L++S +I + + + +LK ++
Sbjct: 412 TLTTLNASSNRIGDAGASALAGNT-TLATLNVSFNRIGEAGLLALEANTTLKKLE 465
>gi|326427049|gb|EGD72619.1| hypothetical protein PTSG_04354 [Salpingoeca sp. ATCC 50818]
Length = 1165
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 170/371 (45%), Gaps = 38/371 (10%)
Query: 117 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 174
++ L V VTDA ++ L TL +L + + LT GIA L NL+ L L G
Sbjct: 767 IQHLAFRSSVVVTDAFLRVLGTQFPTLYELEIYDCPMLTFRGIAALKGAPNLASLHLSGA 826
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTK-----LP 228
TD + +L L LE+ L G++VS++ A P + L +LA T LP
Sbjct: 827 -FTDSCVDALMSLHPLEHFSLNGARVSSQQFARFLSSPTATHLQSLALTSCPALDDGILP 885
Query: 229 NI---SSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFL 284
+I + L L+LS + ++ G P L ++L+ T +ERE + ++ L
Sbjct: 886 SICGLTDLGHLSLSKTPVRAV--GQLASLPHLYSLNLS-YTRASEREVGALAAATNMTTL 942
Query: 285 DVSNSSLSRFCFL--TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSA 341
+ +LS + +L L LSS DD+ C ++ L+LS + +
Sbjct: 943 GLFGLNLSSDAYAPWAGHGSLAELTLSSRDSFDDACLAHVCTLTHVTTLDLSGYYQLTPD 1002
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMS--MMPSLKFIDISNTDIKGFIQQVGAETD 399
G+ +A + L+ LSLS T + D A+ ++ +PSL DIS TD+ TD
Sbjct: 1003 GLKAIAA-MQQLQSLSLSNTALTDAALLHIGGVGLPSLDTFDISRTDV----------TD 1051
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLF---PLSTFKELIHLSLRNASLTDVSLHQLS 456
A + + RLNL +T++++ T F L+ L LS+ + L +L+
Sbjct: 1052 ACAP--AFKGFAAVARLNLSRTRITN-TFFHAHALNDCAALQTLSIERTHTSTKGLAELN 1108
Query: 457 SLSKLTNLSIR 467
LS+L +++ R
Sbjct: 1109 GLSRLQSVNAR 1119
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQN 165
A WA G L EL LS DA + H+ +++ + L LS LT DG+ ++++Q
Sbjct: 955 APWA--GHGSLAELTLSSRDSFDDACLAHVCTLTHVTTLDLSGYYQLTPDGLKAIAAMQQ 1012
Query: 166 LSVLDLGGLPVTDLVLRSLQ--VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
L L L +TD L + L L+ D+ + V++ A K F ++ LNL+ T
Sbjct: 1013 LQSLSLSNTALTDAALLHIGGVGLPSLDTFDISRTDVTDACAPAFKGFAAVARLNLSRTR 1072
Query: 224 VT 225
+T
Sbjct: 1073 IT 1074
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 136/321 (42%), Gaps = 45/321 (14%)
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ L RS V+T +L + G+Q + P L+F +A + PN++SL
Sbjct: 767 IQHLAFRSSVVVTDA-FLRVLGTQFPTLYELEIYDCPMLTFRGIA--ALKGAPNLASL-- 821
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
+LS DS ++ + PL SL G VS+ +RF
Sbjct: 822 -HLSGAFTDSCVDALMSLHPLEHFSLNGAR--------------------VSSQQFARFL 860
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
L+ L L+S DD + C +L +L+LS T + VG LA LP+L
Sbjct: 861 SSPTATHLQSLALTSCPALDDGILPSICGLTDLGHLSLSKTPVRA--VGQLAS-LPHLYS 917
Query: 356 LSLSGTQIDDY---AISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLVLS-------- 403
L+LS T+ + A++ + M +L ++ ++D G+ +L LS
Sbjct: 918 LNLSYTRASEREVGALAAATNMTTLGLFGLNLSSDAYAPWAGHGSLAELTLSSRDSFDDA 977
Query: 404 -LTALQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS--SLS 459
L + L H+ L+L Q++ L ++ ++L LSL N +LTD +L + L
Sbjct: 978 CLAHVCTLTHVTTLDLSGYYQLTPDGLKAIAAMQQLQSLSLSNTALTDAALLHIGGVGLP 1037
Query: 460 KLTNLSIRDAVLTNSGLGSFK 480
L I +T++ +FK
Sbjct: 1038 SLDTFDISRTDVTDACAPAFK 1058
>gi|195150157|ref|XP_002016021.1| GL10712 [Drosophila persimilis]
gi|194109868|gb|EDW31911.1| GL10712 [Drosophila persimilis]
Length = 529
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 339 LEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 398
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 399 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGMV 458
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ SLQ L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 459 KIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 518
Query: 215 SFLNLA 220
LNL
Sbjct: 519 QKLNLG 524
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 57/300 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
R L +L + C +T++ L + G+ L+ L+L C ++D G+ HL S
Sbjct: 277 LRNLENLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRET---- 332
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAA 206
+E L + + L Q LS LG + Q LT L+ ++L + V++ G
Sbjct: 333 AEGNLQLEHLG-LQDCQRLSDEALGHIA---------QGLTSLKSINLSFCVSVTDSGLK 382
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
L P+L LNL C N+S+ + + EG
Sbjct: 383 HLARMPKLEQLNLR-------------SCDNISDIGMAYLTEGGSG-------------- 415
Query: 267 INEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
I + +SF D +S+ +L+ + L L L+ I D + +A
Sbjct: 416 ---------INSLDVSFCDKISDQALTHIA--QGLYRLRSLSLNQCQITDQGMVKIAKSL 464
Query: 326 ANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L NLN+ +R + G+ LA L NL+ + L G TQ+ I + +P L+ +++
Sbjct: 465 QELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 524
>gi|302804592|ref|XP_002984048.1| hypothetical protein SELMODRAFT_445748 [Selaginella moellendorffii]
gi|300148400|gb|EFJ15060.1| hypothetical protein SELMODRAFT_445748 [Selaginella moellendorffii]
Length = 657
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 185/425 (43%), Gaps = 60/425 (14%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKH 135
V E +A + L LN+ C V L +L +C L +LD+SRC V+DAG+
Sbjct: 216 VTDEGLASIATLHSLEVLNLVSCNNVDDGGLRSLK-RSCRSLLKLDVSRCSNVSDAGLAA 274
Query: 136 LLSIS-TLEKLWLSETGLTADGIALLSSLQNLS-----VLD-----LGGLPVTDLVLRSL 184
L + +LE+L LS + D LL++ Q VLD GLP + R
Sbjct: 275 LATSHLSLEQLTLSYCSIITDD--LLATFQKFDHLQSIVLDGCEIARNGLP---FIARGC 329
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 244
+ L +L G V++RG A + G T L ++ C L++ ++
Sbjct: 330 KQLKELSLSKCRG--VTDRGIAAVAQ------------GCTALHKLNLTCCRELTDASLC 375
Query: 245 SILEGNENKAPLAKISLAGTTFINER------EAFLYIETSLLSFLDVSNSSLSRFCFLT 298
I +++ L + + + I E E +E + ++S++ L +++
Sbjct: 376 RI---SKDCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTECNMSDTGLK---YIS 429
Query: 299 QMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEIL 356
+ AL L L S I D V + NLR L+ ++ AGV +A P L++L
Sbjct: 430 KCTALRSLKLGFCSTITDKGVAHIGARCCNLRELDFYRSKGIGDAGVAAIASGCPKLKLL 489
Query: 357 SLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
LS ++I D ++ +S + L+ + +++G + + + T L + + + L ++
Sbjct: 490 DLSYCSKITDCSLQSLSQLRELQRV-----ELRGCV--LVSSTGLAVMASGCKRLTEIDI 542
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL-SIRDAVLTNS 474
+Q+ +A + LS F L + N S +S L SL +L+ L S+R L N
Sbjct: 543 KRC--SQIGNAGVSALSFFCP--GLRMMNISYCPISNAGLLSLPRLSCLQSVRLVHLKNV 598
Query: 475 GLGSF 479
+ F
Sbjct: 599 TVDCF 603
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 190/455 (41%), Gaps = 80/455 (17%)
Query: 81 EWMAYLG--AFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHL 136
E +A +G A L S+N++ TS+ L L C L ++DLS C + D+ + L
Sbjct: 89 ENLALVGQIAGNRLASINLSRVGGFTSAGLGLLARSCCASLTDVDLSYCSNLKDSDVLAL 148
Query: 137 LSISTLEKLWLSET---------------------------GLTADGIALLS-SLQNLSV 168
IS L+ L L+ G+T GIAL++ + + L
Sbjct: 149 AQISNLQALRLTGCHSITDIGLGCLAAGCKMLKLLTLKGCLGITDIGIALVAVNCKQLRT 208
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
LDL VTD L S+ L LE L+L + V + G LK R S L L V++
Sbjct: 209 LDLSYTEVTDEGLASIATLHSLEVLNLVSCNNVDDGGLRSLKRSCR-SLLKL---DVSRC 264
Query: 228 PNIS------------SLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAF 273
N+S SLE L LS C+I D +L + L I L G F
Sbjct: 265 SNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKFDHLQSIVLDGCEIARNGLPF 324
Query: 274 LYIETSLLSFLDVSN---------SSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVAC 323
+ L L +S +++++ C AL L+L+ + D S+ ++
Sbjct: 325 IARGCKQLKELSLSKCRGVTDRGIAAVAQGC-----TALHKLNLTCCRELTDASLCRISK 379
Query: 324 VGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
L +L + S + + G+ L P LE L + + D + Y+S +L+ + +
Sbjct: 380 DCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTECNMSDTGLKYISKCTALRSLKL 439
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPL-STFKELIHL 440
GF + TD ++ + N L L+ +++ + DA + + S +L L
Sbjct: 440 ------GFCSTI---TDKGVAHIGARCCN-LRELDFYRSKGIGDAGVAAIASGCPKLKLL 489
Query: 441 SLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
L S +TD SL LS L +L + +R VL +S
Sbjct: 490 DLSYCSKITDCSLQSLSQLRELQRVELRGCVLVSS 524
>gi|198456933|ref|XP_001360491.2| GA22149 [Drosophila pseudoobscura pseudoobscura]
gi|198135799|gb|EAL25066.2| GA22149 [Drosophila pseudoobscura pseudoobscura]
Length = 529
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 339 LEHLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 398
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 399 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGMV 458
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ SLQ L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 459 KIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 518
Query: 215 SFLNLA 220
LNL
Sbjct: 519 QKLNLG 524
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 57/300 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
R L +L + C +T++ L + G+ L+ L+L C ++D G+ HL S
Sbjct: 277 LRNLENLELGGCCNITNTGLLLIAWGLKKLRHLNLRSCWHISDQGIGHLAGFSRET---- 332
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAA 206
+E L + + L Q LS LG + Q LT L+ ++L + V++ G
Sbjct: 333 AEGNLQLEHLG-LQDCQRLSDEALGHIA---------QGLTSLKSINLSFCVSVTDSGLK 382
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
L P+L LNL C N+S+ + + EG
Sbjct: 383 HLARMPKLEQLNLR-------------SCDNISDIGMAYLTEGGSG-------------- 415
Query: 267 INEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
I + +SF D +S+ +L+ + L L L+ I D + +A
Sbjct: 416 ---------INSLDVSFCDKISDQALTHIA--QGLYRLRSLSLNQCQITDQGMVKIAKSL 464
Query: 326 ANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L NLN+ +R + G+ LA L NL+ + L G TQ+ I + +P L+ +++
Sbjct: 465 QELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 524
>gi|302753328|ref|XP_002960088.1| hypothetical protein SELMODRAFT_437235 [Selaginella moellendorffii]
gi|300171027|gb|EFJ37627.1| hypothetical protein SELMODRAFT_437235 [Selaginella moellendorffii]
Length = 657
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 185/425 (43%), Gaps = 60/425 (14%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKH 135
V E +A + L LN+ C V L +L +C L +LD+SRC V+DAG+
Sbjct: 216 VTDEGLASIATLHSLEVLNLVSCNNVDDGGLRSLK-RSCRSLLKLDVSRCSNVSDAGLAA 274
Query: 136 LLSIS-TLEKLWLSETGLTADGIALLSSLQNLS-----VLD-----LGGLPVTDLVLRSL 184
L + +LE+L LS + D LL++ Q VLD GLP + R
Sbjct: 275 LATSHLSLEQLTLSYCSIITDD--LLATFQKFDHLQSIVLDGCEIARNGLP---FIARGC 329
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 244
+ L +L G V++RG A + G T L ++ C L++ ++
Sbjct: 330 KQLKELSLSKCRG--VTDRGIAAVAQ------------GCTALHKLNLTCCRELTDASLC 375
Query: 245 SILEGNENKAPLAKISLAGTTFINER------EAFLYIETSLLSFLDVSNSSLSRFCFLT 298
I +++ L + + + I E E +E + ++S++ L +++
Sbjct: 376 RI---SKDCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTECNMSDTGLK---YIS 429
Query: 299 QMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEIL 356
+ AL L L S I D V + NLR L+ ++ AGV +A P L++L
Sbjct: 430 KCTALRSLKLGFCSTITDKGVAHIGARCCNLRELDFYRSKGIGDAGVAAIASGCPKLKLL 489
Query: 357 SLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
LS ++I D ++ +S + L+ + +++G + + + T L + + + L ++
Sbjct: 490 DLSYCSKITDCSLQSLSQLRELQRL-----ELRGCV--LVSSTGLAVMASGCKRLTEIDI 542
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL-SIRDAVLTNS 474
+Q+ +A + LS F L + N S +S L SL +L+ L S+R L N
Sbjct: 543 KRC--SQIGNAGVSALSFFCP--GLRMMNISYCPISKAGLLSLPRLSCLQSVRLVHLKNV 598
Query: 475 GLGSF 479
+ F
Sbjct: 599 TVDCF 603
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 190/455 (41%), Gaps = 80/455 (17%)
Query: 81 EWMAYLG--AFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHL 136
E +A +G A L S+N++ TS+ L L C L ++DLS C + D+ + L
Sbjct: 89 ENLALVGQIAGNRLASINLSRVGGFTSAGLGLLARSCCASLTDVDLSYCSNLKDSDVLAL 148
Query: 137 LSISTLEKLWLSET---------------------------GLTADGIALLS-SLQNLSV 168
IS L+ L L+ G+T GIAL++ + + L
Sbjct: 149 AQISNLQALRLTGCHSITDIGLGCLAAGCKMLKLLTLKGCLGITDIGIALVAVNCKQLRT 208
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 227
LDL VTD L S+ L LE L+L + V + G LK R S L L V++
Sbjct: 209 LDLSYTEVTDEGLASIATLHSLEVLNLVSCNNVDDGGLRSLKRSCR-SLLKL---DVSRC 264
Query: 228 PNIS------------SLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAF 273
N+S SLE L LS C+I D +L + L I L G F
Sbjct: 265 SNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKFDHLQSIVLDGCEIARNGLPF 324
Query: 274 LYIETSLLSFLDVSN---------SSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVAC 323
+ L L +S +++++ C AL L+L+ + D S+ ++
Sbjct: 325 IARGCKQLKELSLSKCRGVTDRGIAAVAQGC-----TALHKLNLTCCRELTDASLCRISK 379
Query: 324 VGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
L +L + S + + G+ L P LE L + + D + Y+S +L+ + +
Sbjct: 380 DCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTECNMSDTGLKYISKCTALRSLKL 439
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPL-STFKELIHL 440
GF + TD ++ + N L L+ +++ + DA + + S +L L
Sbjct: 440 ------GFCSTI---TDKGVAHIGARCCN-LRELDFYRSKGIGDAGVAAIASGCPKLKLL 489
Query: 441 SLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
L S +TD SL LS L +L L +R VL +S
Sbjct: 490 DLSYCSKITDCSLQSLSQLRELQRLELRGCVLVSS 524
>gi|307215039|gb|EFN89866.1| F-box/LRR-repeat protein 14 [Harpegnathos saltator]
Length = 457
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 30/198 (15%)
Query: 70 IELRGENSVDAEWMAYLGAFR-------YLRSLNVADCRRVTSSALWALT-GMTCLKELD 121
++LR V + +AYL L L++ DC+R++ AL ++ G+T LK ++
Sbjct: 238 LDLRSCWHVSDQGIAYLAGLNREADGNLALEHLSLQDCQRLSDEALRNVSLGLTTLKSIN 297
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWL------SETGLT--ADGIALLSSLQNLSVLDLGG 173
LS CV +TD+G+KHL +S+L +L L S+ G+ A+G + ++SL ++S D
Sbjct: 298 LSFCVCITDSGVKHLARMSSLRELNLRSCDNISDIGMAYLAEGGSRITSL-DVSFCD--- 353
Query: 174 LPVTDLVLRSL-QVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLAWTGV------- 224
+ D L + Q L L+ L L Q+S+ G + K L LN+
Sbjct: 354 -KIGDQALVHISQGLFNLKSLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDRSLH 412
Query: 225 TKLPNISSLECLNLSNCT 242
T N+ L+C++L CT
Sbjct: 413 TMAENMKHLKCIDLYGCT 430
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 53/301 (17%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGM-----KHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
L G+ L+ L+LS C +TD G+ + L +++ L + T+ G + L+N
Sbjct: 150 LRGVPNLEALNLSGCYNITDTGIMSGFCQELPTLTVLNLSLCKQVTDTSLG-RIAQYLKN 208
Query: 166 LSVLDLGGL-PVTD----LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L L+LGG +T+ ++ L+ L +L+ W VS++G A L R + NLA
Sbjct: 209 LEHLELGGCCNITNTGLMVIAWGLKKLKRLDLRSCW--HVSDQGIAYLAGLNREADGNLA 266
Query: 221 WTGVT----------KLPNIS----SLECLNLSNCTI--DSILEGNENKAPLAKISLAGT 264
++ L N+S +L+ +NLS C DS ++ + L +++L
Sbjct: 267 LEHLSLQDCQRLSDEALRNVSLGLTTLKSINLSFCVCITDSGVKHLARMSSLRELNLRSC 326
Query: 265 TFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 323
I++ A+L S ++ LDVS FC IGD ++ ++
Sbjct: 327 DNISDIGMAYLAEGGSRITSLDVS------FC---------------DKIGDQALVHISQ 365
Query: 324 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSM-MPSLKFID 381
NL++L+LS + S G+ +A L +LE L++ +++ D ++ M+ M LK ID
Sbjct: 366 GLFNLKSLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDRSLHTMAENMKHLKCID 425
Query: 382 I 382
+
Sbjct: 426 L 426
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 78/310 (25%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L L + C +T++ L + G+ LK LDL C V+D G+ +L ++
Sbjct: 206 LKNLEHLELGGCCNITNTGLMVIAWGLKKLKRLDLRSCWHVSDQGIAYLAGLNR------ 259
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAA 206
ADG +L++LS+ D L +D LR++ + LT L+ ++
Sbjct: 260 -----EADGNL---ALEHLSLQDCQRL--SDEALRNVSLGLTTLKSIN------------ 297
Query: 207 VLKMFPRLSF-LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
LSF + + +GV L +SSL LNL +C IS G
Sbjct: 298 -------LSFCVCITDSGVKHLARMSSLRELNLRSCD---------------NISDIGMA 335
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH----------LDLSSSMIGD 315
++ E S ++ LDVS FC +AL H L LS+ I D
Sbjct: 336 YLAE-------GGSRITSLDVS------FCDKIGDQALVHISQGLFNLKSLSLSACQISD 382
Query: 316 DSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSM 373
+ + +A +L LN+ +R + + +A ++ +L+ + L G T+I + +
Sbjct: 383 EGICKIAKTLHDLETLNIGQCSRLTDRSLHTMAENMKHLKCIDLYGCTKITTSGLERIMK 442
Query: 374 MPSLKFIDIS 383
+P L +++
Sbjct: 443 LPQLSTLNLG 452
>gi|17546075|ref|NP_519477.1| GALA protein 4 [Ralstonia solanacearum GMI1000]
gi|17428371|emb|CAD15058.1| type III effector protein gala6 [Ralstonia solanacearum GMI1000]
Length = 620
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 136/305 (44%), Gaps = 21/305 (6%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L LD+S V +AG + + L++L L+ ++ DG L+ ++L+ LDL +
Sbjct: 286 LTSLDVSNN-GVGNAGAEAFAGNTVLKQLSLAGGMISGDGAQALADNKSLTDLDLSNNRL 344
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 231
D ++L L L G+++ GA L L LNL++ GV L +
Sbjct: 345 GDAGAQALADSESFVSLKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVNAL-GRA 403
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAK-ISLA----GTTFINEREAFLYIETSLLSFLDV 286
L L+L C IDS + + LA+ SLA G+ I + A + S L+ L++
Sbjct: 404 KLRKLDLCACAIDS-----DGASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNL 458
Query: 287 SNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
S +++ L +L LDLS + IGDD +AC L +LNLS + S G
Sbjct: 459 SGNNIHAVGAQALASNDSLITLDLSRNGIGDDGTAALACH-PRLTSLNLSRNQIGSTGAQ 517
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 404
LA L L LS +I ++ L +++S I + AE+ + SL
Sbjct: 518 QLA-KSATLAELDLSENRIGPEGAEALARSTVLTTLNVSYNAIGEAGARALAESVSLTSL 576
Query: 405 TALQN 409
A +N
Sbjct: 577 DARRN 581
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 38/257 (14%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT--GMTCLKELDLSRCVKVTDA 131
G N + A+ L L+SLN++ W + G L++LDL C +D
Sbjct: 364 GGNEIGADGAEALARNVVLQSLNLS----YNPIGFWGVNALGRAKLRKLDLCACAIDSD- 418
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G L ++L L+L + DG L+ L++L+L G + + ++L L
Sbjct: 419 GASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNLSGNNIHAVGAQALASNDSLI 478
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCTIDSI 246
LDL + + + G A L PRL+ LNL+ TG +L ++L L+LS I
Sbjct: 479 TLDLSRNGIGDDGTAALACHPRLTSLNLSRNQIGSTGAQQLAKSATLAELDLSENRI--- 535
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALE 304
G E LA+ +++L+ L+VS +++ L + +L
Sbjct: 536 --GPEGAEALAR-------------------STVLTTLNVSYNAIGEAGARALAESVSLT 574
Query: 305 HLDLSSSMIGDDSVEMV 321
LD + IG+D +++
Sbjct: 575 SLDARRNGIGEDGAKVL 591
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 160/384 (41%), Gaps = 28/384 (7%)
Query: 117 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
L+ L++ RC ++ G+ HL S+ L+ L L+ + +G L++ ++L L L G
Sbjct: 165 LEHLEIGRCTGSAISAEGLAHLASM-PLKSLNLNGIEIGVEGARTLAASKSLVSLSLIGC 223
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPN 229
+ D ++L ++ LDL +++ GA L P +S LNL G L
Sbjct: 224 GIGDRAAQALVASRSIQCLDLSVNRIGRDGAQALAGAPLVS-LNLHNNEIGNEGARVLAT 282
Query: 230 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
+L L++SN + ++ E L ++SLAG I+ A + L+ LD+SN
Sbjct: 283 SRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGG-MISGDGAQALADNKSLTDLDLSN 341
Query: 289 SSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
+ L L ++ L L + IG D E +A L++LNLS GV L
Sbjct: 342 NRLGDAGAQALADSESFVSLKLGGNEIGADGAEALA-RNVVLQSLNLSYNPIGFWGVNAL 400
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
L L L ID S ++ SL + + + I GA A
Sbjct: 401 G--RAKLRKLDLCACAIDSDGASALARNTSLASLYLGSNRIG----DDGAR--------A 446
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L + L LNL + L++ LI L L + D L+ +LT+L++
Sbjct: 447 LAKNSTLTLLNLSGNNIHAVGAQALASNDSLITLDLSRNGIGDDGTAALACHPRLTSLNL 506
Query: 467 RDAVLTNSGLGSFKPPRSLKLLDL 490
+ ++G +L LDL
Sbjct: 507 SRNQIGSTGAQQLAKSATLAELDL 530
>gi|290996590|ref|XP_002680865.1| predicted protein [Naegleria gruberi]
gi|284094487|gb|EFC48121.1| predicted protein [Naegleria gruberi]
Length = 304
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCL-------KELDLSRCV 126
GE ++AE +AYL L+ LN + TS+ L + + L KE D+
Sbjct: 90 GELRLEAESVAYLKKLTNLKELNCSPDSYGTSAHLSEMKSLNSLILNVKYNKEEDIENIS 149
Query: 127 KVTD-------------AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
K+T G + L +IS+ L LS + G+ + L NL+ L+L
Sbjct: 150 KLTSLNHLKLWNSNINSKGAEFLSNISSFTSLNLSGNVIRDAGLVNIGKLANLTFLNLSY 209
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LP 228
++D + +L L KL L+L G+ + ++GA ++ F L +L L +TK L
Sbjct: 210 NGLSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIISKFSHLKYLQLRNNQITKNGANYLS 269
Query: 229 NISSLECLNLSNCTIDSILE 248
N++SL L+L +D +E
Sbjct: 270 NLNSLYSLDLRENKLDYKIE 289
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 269 EREAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 327
E E+ Y++ + L L+ S S L++MK+L L L+ ++ +E ++ + +
Sbjct: 95 EAESVAYLKKLTNLKELNCSPDSYGTSAHLSEMKSLNSLILNVKYNKEEDIENISKLTS- 153
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L +L L N+ +S G L+ ++ + L+LSG I D + + + +L F+++S +
Sbjct: 154 LNHLKLWNSNINSKGAEFLS-NISSFTSLNLSGNVIRDAGLVNIGKLANLTFLNLSYNGL 212
Query: 388 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
+T L NL L LNL + D +S F L +L LRN +
Sbjct: 213 SDS------------GITNLGNLRKLTDLNLNGNNIEDQGAKIISKFSHLKYLQLRNNQI 260
Query: 448 TDVSLHQLSSLSKLTNLSIRDAVL 471
T + LS+L+ L +L +R+ L
Sbjct: 261 TKNGANYLSNLNSLYSLDLRENKL 284
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 144/298 (48%), Gaps = 36/298 (12%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
R+T++ +++ + L LDLS VTDA +K + I ++ +L + T + I +S
Sbjct: 22 RITNTKIFS--KLKNLTALDLSYNELVTDAHVKEISLIPSMRRLNIFCTDIGKQSIVYIS 79
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL----DLWGSQVSNRGAAVLKMFPRLS-- 215
++ L L LG L + + L+ LT L+ L D +G+ +A L L+
Sbjct: 80 EMKLLESLILGELRLEAESVAYLKKLTNLKELNCSPDSYGT------SAHLSEMKSLNSL 133
Query: 216 FLNLAWTGVTKLPNISSLECLN---LSNCTIDSILEGNE---NKAPLAKISLAGTTFINE 269
LN+ + + NIS L LN L N I+S +G E N + ++L+G
Sbjct: 134 ILNVKYNKEEDIENISKLTSLNHLKLWNSNINS--KGAEFLSNISSFTSLNLSGNVI--- 188
Query: 270 REAFLYIETSL--LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
R+A L L L+FL++S + LS L ++ L L+L+ + I D ++++
Sbjct: 189 RDAGLVNIGKLANLTFLNLSYNGLSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIISKF- 247
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK--FID 381
++L+ L L N + + G L+ +L +L L L ++ DY I + P+++ FI+
Sbjct: 248 SHLKYLQLRNNQITKNGANYLS-NLNSLYSLDLRENKL-DYKIE--KIFPNVRRLFIE 301
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
++++MK LE L L + +SV + + NL+ LN S + ++ HL +
Sbjct: 75 IVYISEMKLLESLILGELRLEAESVAYLKKL-TNLKELNCSPDSYGTSA------HLSEM 127
Query: 354 E-----ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KG--FIQQVGAETDLVLS- 403
+ IL++ + +D I +S + SL + + N++I KG F+ + + T L LS
Sbjct: 128 KSLNSLILNVKYNKEED--IENISKLTSLNHLKLWNSNINSKGAEFLSNISSFTSLNLSG 185
Query: 404 -------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 456
L + L +L LNL +SD+ + L ++L L+L ++ D +S
Sbjct: 186 NVIRDAGLVNIGKLANLTFLNLSYNGLSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIIS 245
Query: 457 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
S L L +R+ +T +G SL LDL
Sbjct: 246 KFSHLKYLQLRNNQITKNGANYLSNLNSLYSLDL 279
>gi|218185950|gb|EEC68377.1| hypothetical protein OsI_36516 [Oryza sativa Indica Group]
Length = 959
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 157/400 (39%), Gaps = 72/400 (18%)
Query: 136 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
LL+++ LE + LS+ G T L SLQNL L+L G+P + V L LT L Y
Sbjct: 144 LLNLTYLEHIDLSKNQLQGQTGRVPEFLGSLQNLRYLNLSGIPFSGEVPPQLGNLTNLHY 203
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE- 251
L L S+ G ++F ++ W L + SL L++S+ ++ + + +
Sbjct: 204 LGL-----SDTG---------INFTDIQW-----LARLHSLTHLDMSHTSLSMVHDWADV 244
Query: 252 -NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
N P K+ L++ L + D S S F + LE LDLS
Sbjct: 245 MNNIPSLKV--------------LHLAYCNLVYAD---QSFSHF----NLTNLEELDLSV 283
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+ L+ LNL +T+ + G +L L LS T D +
Sbjct: 284 NYFNHPIASCWFWNAQGLKYLNLGSTKLYGQFPNV-PGQFGSLRFLDLSSTCNIDIVTTN 342
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
++ + +L+ I + + I G I Q +L + N L L L +S
Sbjct: 343 LTNLCNLRIIHLERSQIHGDIAQ-------LLQRLPRCSYNRLNELYLSDNNISGILPNR 395
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR----DAVLTNSGLGSFKPPRSLK 486
L L+ L + + L+ Q+ S LT L + + V+T+ F RSLK
Sbjct: 396 LDHLTSLVILDISHNKLSGPLPPQIGMFSNLTYLDLSSNNLNGVITDE---HFTSMRSLK 452
Query: 487 LLDLHGG---------WLL---TEDAILQFCKMHPRIEVW 514
LDL G WL E A+ C M PR W
Sbjct: 453 TLDLSGNSLKILVDSEWLPLFSLEVALFSPCHMGPRFPGW 492
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 59/292 (20%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS--------NRGAAVLKMF 211
+S+++L LDL G SL++L E+L L+ +V+ R LK
Sbjct: 445 FTSMRSLKTLDLSG--------NSLKILVDSEWLPLFSLEVALFSPCHMGPRFPGWLKRQ 496
Query: 212 PRLSFLNLAWTGVT-KLPNISSLECLN-----LSNCTIDSILEGN-ENKAPLAKISLAGT 264
+++LN+++ G+T +LPN S LN +SN I+ L N E L+++ +
Sbjct: 497 VNITYLNMSFAGITDRLPNWFSTTFLNAQLLDVSNNEINGSLPANMEVMTTLSRLYMGS- 555
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSV--EM 320
N+ + + L +D+S +SLS AL +L L S+ + D+ + E
Sbjct: 556 ---NKLTGQIPLLPKALEIMDISRNSLSGPLPSNFGDDLALSYLHLFSNHLADNLLKGEF 612
Query: 321 VACV-GANLRNLNLSNTRFSSAGVGILAGHLP-------NLEILSLSGTQIDDYAISYMS 372
C L L +SN IL+G P NLE+L L+ ++
Sbjct: 613 PRCFQPVFLSKLFVSNN--------ILSGKFPPFLRSRHNLEMLDLASNDFYGGLPIWIG 664
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
+ +L + +SN + G I T++ NL L +L+L +S
Sbjct: 665 ELSNLAIVRLSNNNFSGNIP------------TSITNLTRLVQLDLSNNSIS 704
>gi|335058613|gb|AEH26502.1| leucine-rich repeat domain protein [uncultured Acidobacteria
bacterium A11]
Length = 402
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 183
R + DA + L + L L L+ TG+ G+ ++ +L+NL L+L PVTD L
Sbjct: 139 RNDTLVDAWLDRLADLPDLISLDLANTGVAGPGLKVVGTLKNLERLNLTLTPVTDAHLEH 198
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 238
L LT L L L ++ + G L +L N +T G+ + ++ LE L +
Sbjct: 199 LAGLTNLRVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTGLERLEI 258
Query: 239 SNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 297
+C + AP LAK+ + +E + D + +++ L
Sbjct: 259 VHCHF------TDAGAPHLAKL--------------VNLERLQIGSRDATGAAIEPLTAL 298
Query: 298 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 357
T+++ LDL + + V + + +LR L + + + G +A L NLEIL
Sbjct: 299 TKLR---ELDLQDNQATAEGVRHASRI-PSLRVLRI-HGQIKDEGAASIA-QLSNLEILV 352
Query: 358 LSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
+ + D A+ + + +P L+ ++I I
Sbjct: 353 ANNAGLTDDALDHFARLPRLQRLEIKGNKI 382
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L + L LDL+++ + +++V + NL LNL+ T + A + LAG L NL +L
Sbjct: 151 LADLPDLISLDLANTGVAGPGLKVVGTL-KNLERLNLTLTPVTDAHLEHLAG-LTNLRVL 208
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
SL+ + ++ + L+ + T + L + + LERL
Sbjct: 209 SLASAKCTGEGFRFLGKLKQLENANFHFTPVNDA------------GLAGISTVTGLERL 256
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
+ +DA L+ L L + + T ++ L++L+KL L ++D T G+
Sbjct: 257 EIVHCHFTDAGAPHLAKLVNLERLQIGSRDATGAAIEPLTALTKLRELDLQDNQATAEGV 316
Query: 477 GSFKPPRSLKLLDLHG 492
SL++L +HG
Sbjct: 317 RHASRIPSLRVLRIHG 332
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
R T +A+ LT +T L+ELDL + T G++H I +L L + + +G A +
Sbjct: 285 RDATGAAIEPLTALTKLRELDLQDN-QATAEGVRHASRIPSLRVLRI-HGQIKDEGAASI 342
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
+ L NL +L +TD L L +L+ L++ G+++++ A L+
Sbjct: 343 AQLSNLEILVANNAGLTDDALDHFARLPRLQRLEIKGNKITDPALARLQ 391
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
D + ++ +P L +D++NT + G L + L +LERLNL T V+
Sbjct: 145 DAWLDRLADLPDLISLDLANTGVAGP------------GLKVVGTLKNLERLNLTLTPVT 192
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
DA L L+ L LSL +A T L L +L N + + ++GL
Sbjct: 193 DAHLEHLAGLTNLRVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTG 252
Query: 485 LKLLDL 490
L+ L++
Sbjct: 253 LERLEI 258
>gi|332668444|ref|YP_004451232.1| Miro domain-containing protein [Haliscomenobacter hydrossis DSM
1100]
gi|332337258|gb|AEE54359.1| Miro domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1058
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 149/312 (47%), Gaps = 62/312 (19%)
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+L V DL +P +S+ LT+L+ L + S+V + ++++ L+ L+L+ T V
Sbjct: 21 DLRVYDLTKIP------QSIVTLTELKVLRI-KSRVLKDLSPLMQLH-NLTTLDLSSTPV 72
Query: 225 TKL---PNISSLECLNLSNCTIDSILEGNENKAPLAKIS-----LAGTTFINEREAFLYI 276
+ L + +L LN+SN + + +PLA++ A T +++ +
Sbjct: 73 SNLRPLAQLRNLTQLNISNTHVKDL-------SPLAQLYNLTELFASETKVSDLSPLAQL 125
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
L+ LDVSNS +S L Q+ L LD+S+S GD S + R L N+
Sbjct: 126 HN--LTTLDVSNSGVSDLSPLAQLHDLTTLDVSNS--GDLS---------DTRWL-FGNS 171
Query: 337 RFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 394
F V L+ L NL LS S T + D ++ +S + +L + I NT
Sbjct: 172 TFYRTDVSDLSPLTQLHNLTWLSFSKTPVSD--LTPLSQLHNLTQLFIYNT--------- 220
Query: 395 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 454
LV L L+ L++L+RL++ T VSD L P+S + L L + N +++D
Sbjct: 221 -----LVSDLRPLEQLHNLDRLDVSNTTVSD--LSPVSQLQNLTKLYVYNTAVSD----- 268
Query: 455 LSSLSKLTNLSI 466
LS L KL NL+I
Sbjct: 269 LSPLEKLYNLNI 280
>gi|320169763|gb|EFW46662.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 684
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 156/359 (43%), Gaps = 43/359 (11%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++ L L+LS +T+ + S L L+ L L G P+T + + LT L LD++ +
Sbjct: 56 LTALNSLFLSNNPITSIAVNAFSGLTALTQLSLAGNPLTTIPDNTFTGLTALTRLDVYVT 115
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
Q+++ A+ P L L+L +T NI+S L+ T S+ N P
Sbjct: 116 QIASISASAFAGLPVLEVLSLNDNQIT---NIASNTFTGLTALTRLSLFNNNITSIP--- 169
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSN---SSLSRFCFLTQMKALEHLDLSSSMIGD 315
A + + S L++LD++ +SLS F+ + L +L L+S+ I
Sbjct: 170 -------------ASAFADLSALTYLDLAGNQMTSLSANAFI-GLTELTYLSLTSNEI-- 213
Query: 316 DSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
S+ A G L L L N +S AG L +L +L + QI + + + +
Sbjct: 214 TSISPAAFTGLTALTELVLENNLIASISANDFAG-LTSLNLLRMRNNQITSLSANGFAGL 272
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSL--TALQNLNHLERLNLEQTQVSDATLFPLS 432
PSL +D+ + +L+ S+ +A L L L+++ Q++ + +
Sbjct: 273 PSLTELDL--------------DLNLMTSIDASAFAGLTSLNLLSVQNNQITSISANGFA 318
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
L L L + +T +S + + L+ L L + +T+ +F SL +L LH
Sbjct: 319 GLPSLTALGLESNQITSISANAFAGLTSLNFLRLEGNQITSISANAFAAVTSLSVLSLH 377
>gi|440804643|gb|ELR25520.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 444
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 169/371 (45%), Gaps = 47/371 (12%)
Query: 37 LPAHLADSLLRHL-IRRRLIFPSLLEVFKHNAEAI------ELRGENSVDAEWMAYLGAF 89
+PA L +L+ + +RR+ P+ + F ++ + + R N E MA
Sbjct: 29 MPAELKHKILQSVCLRRKNFTPAEFQFFIEPSDHLTSLDLSQCRTLNENHFELMA--TKL 86
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSI--STLEKL 145
R L SLNVA C VT L +T +C +++L LS C KVTD+G+ + + + L +L
Sbjct: 87 RQLVSLNVAGCVSVTYDVLQRITE-SCPHIRQLTLSGCPKVTDSGVALVATTYHTNLTRL 145
Query: 146 WLSET-GLTADGIALLS-SLQNLSVLDLGGLPV-----TDLVLRSLQVLTKLEYLDL--- 195
L+E +T + +A LS N+ L LG T+++ R+L K+ Y+ L
Sbjct: 146 ELNECFEVTDNSLASLSEQCTNIKALHLGYCQYITDKGTEMLCRALPTNPKMSYIHLEEI 205
Query: 196 ---WGSQVSNRGAAVLKMF-PRLSFLNLAWTGVT------------KLPNISSLECLNLS 239
+ ++++++ L F L +L+++ +T +L ++ EC L+
Sbjct: 206 TLDYCTELTDKAIQQLVSFNSTLRYLSMSGCKITDNAIRYVAGYCARLVTLNVKECDMLT 265
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET----SLLSFLDVSNSSLSRFC 295
+ TI I + + T + ++ LY SL ++N+SL
Sbjct: 266 DYTITVIAQRCKGLEAFDGSCGGRYTDASAQQLALYSHQLKSLSLARSAAITNASLGSIA 325
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLE 354
+E L+++ + + D+ ++ + NL+ L++S R + G+ +L + P+L+
Sbjct: 326 L--GCSRIESLNINGTQVSDEGLKQLVTSCRNLKQLDVSFCKRLTVDGIRLLLTNCPSLQ 383
Query: 355 ILSLSGTQIDD 365
L++ G + D
Sbjct: 384 KLAMWGITVPD 394
>gi|149178243|ref|ZP_01856836.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148842892|gb|EDL57262.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 254
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
K+TD +K L +S ++ L L T +T+ G+A L L+ L+ L L V D L+ LQ
Sbjct: 65 KITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLKHLQQ 124
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK------LPNISSLECLNLSN 240
L LEYL+L+G+++++ G + L +L L + T VT+ I+ LE + L
Sbjct: 125 LPNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQTKVTRPAGLALQEQITGLEVIGLPE 184
Query: 241 CTIDSILEGNENKAPLAKISLAGTT 265
E E P+ K A T
Sbjct: 185 EPKPVAAEKPELPKPVEKKPEAKKT 209
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L LQ+L L L+LE+T+V+DA L L L +L+L +TD L QLSSL KL
Sbjct: 95 LAQLQHLKALTHLHLEKTKVNDAGLKHLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLKR 154
Query: 464 LSI 466
L +
Sbjct: 155 LYV 157
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LS+ +T + + L+ L + L+L G VT L LQ L L +L L ++V++ G
Sbjct: 61 LSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLK 120
Query: 207 VLKMFPRLSFLNLAWTGVTK--LPNISSLECLN 237
L+ P L +LNL T +T L +SSL+ L
Sbjct: 121 HLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLK 153
>gi|51850104|dbj|BAD42393.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 647
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 165/394 (41%), Gaps = 51/394 (12%)
Query: 117 LKELDLSRC----VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
L+ +DL C + A +++L ++ LE L + + G ALL+ ++L L++
Sbjct: 202 LRHIDLGECDPGCGAKSHAAIEYLATL-PLESLNVKGAAIGDRGAALLAGNRSLKTLNVA 260
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
++++ R L LE LD+ G+Q+ RGA L + L L GVT P I +
Sbjct: 261 DGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSESIQTLRLCCCGVTD-PGIQA 319
Query: 233 ------LECLNLSNCTIDS----ILEGNENKAPLAKISLAGTTFINER------------ 270
L+ L++S I+ L N + L +S T + E
Sbjct: 320 LARNRQLKSLDVSGNHINEDALRALAANPSLTTL-DVSCNRQTPVGEPQSVEQGVSMALA 378
Query: 271 --EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE-----HLDLSSSMIGDDSVEMVAC 323
E + ET L S N+ + F +M A L L S+ IG + + +A
Sbjct: 379 LAEGLVGRETPLASLKADGNAFVD---FAAEMLAFPTIGTASLSLKSNFIGPEGAQKLAE 435
Query: 324 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID-- 381
A L++L+L+ + AG L+ H +L+ LS+ + D ++ P L +D
Sbjct: 436 NPA-LKSLDLTRNKIGDAGAEALS-HSRSLKTLSVLNCDVKDPGAQALARNPMLITLDLG 493
Query: 382 --ISNTDIKGFIQQVGAETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLST 433
IS QQ E D + AL L L+++ DA + PL+
Sbjct: 494 NLISEKQNPAARQQEQDEFDATANEITENGTRALAQSPSLTSLSVQGNLCEDAGVLPLAR 553
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
L L++ ++T S +L+S LT+L++R
Sbjct: 554 SPRLTSLNVAYTNMTLESARELASNPVLTSLNVR 587
>gi|354492507|ref|XP_003508389.1| PREDICTED: F-box/LRR-repeat protein 13 [Cricetulus griseus]
Length = 824
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 122/304 (40%), Gaps = 72/304 (23%)
Query: 66 NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N + I G + Y+ + + + + DC+ +T S+L +L+ + L L+L+
Sbjct: 486 NLKKIRFEGNKRITDACFKYIDKNYPGINHIYMVDCKTLTDSSLKSLSVLKQLTVLNLTN 545
Query: 125 CVKVTDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTD 178
C++++DAG++ L S + +L L+ L D + L NL L L +TD
Sbjct: 546 CIRISDAGLRQFLDGSVSVKIRELNLNNCSLVGDPAIVKLSERCTNLHYLSLRNCEHLTD 605
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 238
L + + + L +DL G+ +S+ G A+L +L ++L+ EC N+
Sbjct: 606 LAIECIANMQSLISIDLSGTSISHEGLALLSRHRKLREVSLS-------------ECTNI 652
Query: 239 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 298
++ I + + N
Sbjct: 653 TDMGIRAFCRSSMN---------------------------------------------- 666
Query: 299 QMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEIL 356
LEHLD+S S + DD ++ VA + +LN++ + + G+ L+ L IL
Sbjct: 667 ----LEHLDVSHCSQLSDDIIKAVAIFCTQITSLNIAGCPKITDGGLETLSAKCHYLHIL 722
Query: 357 SLSG 360
+SG
Sbjct: 723 DISG 726
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 204/480 (42%), Gaps = 74/480 (15%)
Query: 105 SSALWALTGMTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALLSS- 162
+ L A++ L+EL++S C +TD M+H+ + L LS T +T + LL
Sbjct: 320 TKTLKAVSHCKNLQELNVSDCQSLTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRY 379
Query: 163 LQNLSVLDLGGL-PVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG--------AAVLK 209
NL L+L TD L+ L + KL YLDL G +Q+S +G ++
Sbjct: 380 FPNLQNLNLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRNIANSCTGIMH 439
Query: 210 M----FPRLSFLNLAWTGVTKLPNISSLECL---NLSNCTIDSILEGNENKAPLAKISLA 262
+ P L+ N V K IS++ + ++S+C ++ N L KI
Sbjct: 440 LTINDMPTLTD-NCVKVLVEKCLQISTVVFIGSPHISDCAFKALTSCN-----LKKIRFE 493
Query: 263 GTTFINEREAFLYIETSL-----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDD 316
G I + F YI+ + + +D + S L+ +K L L+L++ + I D
Sbjct: 494 GNKRITD-ACFKYIDKNYPGINHIYMVDCKTLTDSSLKSLSVLKQLTVLNLTNCIRISDA 552
Query: 317 SVEMV--ACVGANLRNLNLSNTRF-SSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMS 372
+ V +R LNL+N + L+ NL LSL + + D AI ++
Sbjct: 553 GLRQFLDGSVSVKIRELNLNNCSLVGDPAIVKLSERCTNLHYLSLRNCEHLTDLAIECIA 612
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATL--F 429
M SL ID+S T I L L L ++L E T ++D + F
Sbjct: 613 NMQSLISIDLSGTSISH------------EGLALLSRHRKLREVSLSECTNITDMGIRAF 660
Query: 430 PLSTFKELIHLSLRNAS-LTDVSLHQLSSL-SKLTNLSIRDA-VLTNSGLGSFKPP-RSL 485
S+ L HL + + S L+D + ++ +++T+L+I +T+ GL + L
Sbjct: 661 CRSSM-NLEHLDVSHCSQLSDDIIKAVAIFCTQITSLNIAGCPKITDGGLETLSAKCHYL 719
Query: 486 KLLDLHGGWLLTEDAI--------------LQFCKMHPRIEVWHELSVICPSDQIGSNGP 531
+LD+ G LLT+ + +QFCK + H++S + + S P
Sbjct: 720 HILDISGCILLTDQILQDLRVGCKQLRILKMQFCK-SISVAAAHKMSSVVQHQEYSSRNP 778
>gi|224007994|ref|XP_002292956.1| hypothetical protein THAPSDRAFT_16210 [Thalassiosira pseudonana
CCMP1335]
gi|220971082|gb|EED89417.1| hypothetical protein THAPSDRAFT_16210 [Thalassiosira pseudonana
CCMP1335]
Length = 301
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 56/318 (17%)
Query: 92 LRSLNVADCRRVTSSALWALTGM-TCLKELDLSRCVKVTDAGMKHLL------------- 137
LR+L++A+CRR+T A+ ++ + T L ++L C +TD ++ L
Sbjct: 1 LRTLSLANCRRLTDEAVVNVSHLSTSLVAVNLGGCRCLTDRSLEALGGLLGLTKLDLSQV 60
Query: 138 --------SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QV 186
I+ L+ L L +G+ + +A SL L L+L + D + L V
Sbjct: 61 CLRSSWQGKINNLKSLELCYSGVQDNHLAHFRSLPMLEELNLDSCHLGDWSIAHLADNNV 120
Query: 187 LTKLEYLDLWGSQVSNRG---AAVLKMFPRLS--FLNLAWTGVTKLPNISSLECLNLSNC 241
+ + LDL + +S+ G A K RLS + N+ G+ L +++ LE LNL
Sbjct: 121 IPNITSLDLADADISDFGLSKIAQFKQMKRLSLFYCNVTSAGLRHLSSMTKLEVLNL--- 177
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
DS G+E L + L + R L + + +K
Sbjct: 178 --DSREIGDEGLKHLRDLPLQSLDVFSGRVTDL------------------GYGCIRLIK 217
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSG 360
L+ L+L +GD +A + NL +LNLS N R ++ G LA L NL+ L+LS
Sbjct: 218 TLQSLELCGGGVGDIGCTHLATI-PNLTSLNLSQNERITNRGAASLAA-LSNLKALNLSN 275
Query: 361 TQIDDYAISYMSMMPSLK 378
T + A+ Y S + LK
Sbjct: 276 TAVTPDALRYFSDLSKLK 293
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 407
G + NL+ L L + + D +++ +P L+ +++ + + + A+ +++ ++T+L
Sbjct: 68 GKINNLKSLELCYSGVQDNHLAHFRSLPMLEELNLDSCHLGDWSIAHLADNNVIPNITSL 127
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
+L +SD L ++ FK++ LSL ++T L LSS++KL L++
Sbjct: 128 ---------DLADADISDFGLSKIAQFKQMKRLSLFYCNVTSAGLRHLSSMTKLEVLNLD 178
Query: 468 DAVLTNSGLGSFK--PPRSLKLL 488
+ + GL + P +SL +
Sbjct: 179 SREIGDEGLKHLRDLPLQSLDVF 201
>gi|46447561|ref|YP_008926.1| hypothetical protein pc1927 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401202|emb|CAF24651.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 109
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN DAE +A+L L+ L+++ C+ +T + L LT +T L+ LDLS C +TDAG+
Sbjct: 16 ENLTDAE-LAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHLDLSYCENLTDAGLA 74
Query: 135 HLLSISTLEKLWLS 148
HL ++ L+ L LS
Sbjct: 75 HLAPLTALQHLDLS 88
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET- 150
L+ L ++ C +T + L LT +T L+ LDLS C ++TDAG+ HL +++L+ L LS
Sbjct: 7 LQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHLDLSYCE 66
Query: 151 GLTADGIALLSSLQNLSVLDL 171
LT G+A L+ L L LDL
Sbjct: 67 NLTDAGLAHLAPLTALQHLDL 87
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVL 169
+T +T L+ L LS C +TDA + HL ++ L+ L LS +T G+A L+ L +L L
Sbjct: 1 MTPLTGLQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHL 60
Query: 170 DLGGLP-VTDLVLRSLQVLTKLEYLDL 195
DL +TD L L LT L++LDL
Sbjct: 61 DLSYCENLTDAGLAHLAPLTALQHLDL 87
>gi|359464005|ref|ZP_09252568.1| internalin A protein [Acaryochloris sp. CCMEE 5410]
Length = 624
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 198/419 (47%), Gaps = 64/419 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++++ + L SL +A + V S L LT + L R + D + LL+ L
Sbjct: 155 ISFIQDLKQLTSLGLAANKIVDISGLKDLTTLNSLNL----RSNAIDDYSV--LLNFKEL 208
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDL-VLRSLQVLTKLEYLDLWGSQV 200
+L +S A G+A L L+ L+ LDL ++D+ VLR L KL +LDL +Q+
Sbjct: 209 SQLTVSVR--EATGLAFLQDLRGLTYLDLSYNHWISDISVLRHL---PKLTHLDLGSNQI 263
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLP---NISSLECLNLSNCTIDSI-----LEG--- 249
S+ AVL P+L+ L+L+ ++ L + LE L++S I I L+G
Sbjct: 264 SD--IAVLSDLPQLTHLSLSANKISDLSVLQTLQGLESLDISANEIADIAILQNLQGLTQ 321
Query: 250 -----NE--NKAPLAKISLAGTTFINEREAFLY-IETSL--LSFLDVSNSSLSRFCFLTQ 299
N+ + + L ++ ++ E Y + L L+ LDVS++ LS L
Sbjct: 322 LDISSNDVSDISALQDLTTLTQLNVSSNEVIDYSVLQGLTELTNLDVSDNQLSEISDLQG 381
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
+ AL L+LS + + D SV L LNLS S V + +L L+LS
Sbjct: 382 LHALTSLNLSYNQLSDISVLQDL---KQLATLNLSYNPVSDIAV---LQNFKDLTTLNLS 435
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNT---------DIKGFIQQVGAETDLVLSLTALQNL 410
TQI D +S + + L +D+ + D+KG + ++ + + ++AL+NL
Sbjct: 436 FTQITD--LSTLQGLKGLTSLDLHSNQIRDISALQDLKG-LYRLNVSDNQLSDISALRNL 492
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS---LTDVSLHQLSSLSKLTNLSI 466
L LNL Q+SD ++ ++L L+ NAS L+D+S+ L L++L +L +
Sbjct: 493 KGLFSLNLSINQISD-----IAALQDLTRLTSLNASHNRLSDISV--LQGLTRLNSLDL 544
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 206/466 (44%), Gaps = 97/466 (20%)
Query: 22 ESVQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDA 80
E + R ++ S+E L D+ HL R+ P+ + +H + L+G VD
Sbjct: 11 EQTTRKRLKQMSVEDFNQSLNDTY-HHLQRQ----PNAYALNDEHQIVGLSLQG---VDG 62
Query: 81 EWM--AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS-RCVKVTDAGMKHLL 137
+ A + + +L +L + D + S + + L + LS + V T +L
Sbjct: 63 HELVDASIEQYPHLSALYLFD---IVSPEIVPFASLPGLSTIALSGQDVTAT----SYLQ 115
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ L ++L T ++ + LS L+NL+ LDL + D+ +Q L +L L L
Sbjct: 116 QATNLTTVYLKTTHIS--DYSFLSDLKNLTHLDLSNNQIADISF--IQDLKQLTSLGLAA 171
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID--SILEGNENKAP 255
+++ ++ L ++++L LNL + ID S+L N
Sbjct: 172 NKI---------------------VDISGLKDLTTLNSLNLRSNAIDDYSVL---LNFKE 207
Query: 256 LAKISLA-----GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
L++++++ G F+ + Y++ LS+ N +S L + L HLDL S
Sbjct: 208 LSQLTVSVREATGLAFLQDLRGLTYLD---LSY----NHWISDISVLRHLPKLTHLDLGS 260
Query: 311 SMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ I D +A + L +L+LS + S V L LE L +S +I D AI
Sbjct: 261 NQISD-----IAVLSDLPQLTHLSLSANKISDLSV---LQTLQGLESLDISANEIADIAI 312
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
+ + L +DIS+ D+ ++ALQ+L L +LN+ +V D ++
Sbjct: 313 --LQNLQGLTQLDISSNDVS--------------DISALQDLTTLTQLNVSSNEVIDYSV 356
Query: 429 FPLSTFKELIHLSLRNASLTDVS----LHQLSSL----SKLTNLSI 466
L EL +L + + L+++S LH L+SL ++L+++S+
Sbjct: 357 --LQGLTELTNLDVSDNQLSEISDLQGLHALTSLNLSYNQLSDISV 400
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 22/182 (12%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-------------CLKELDLSRCVKVT 129
+A L F+ L +LN++ + S L L G+T L++L + V+
Sbjct: 420 IAVLQNFKDLTTLNLSFTQITDLSTLQGLKGLTSLDLHSNQIRDISALQDLKGLYRLNVS 479
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS---VLDLGGLPVTDLVLRSLQV 186
D + + ++ L+ L+ L+ + I+ +++LQ+L+ L+ ++D+ + LQ
Sbjct: 480 DNQLSDISALRNLKGLF--SLNLSINQISDIAALQDLTRLTSLNASHNRLSDISV--LQG 535
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LT+L LDL +Q+++ +VL+ P L L+L ++ V+ + L LNLS+ I S+
Sbjct: 536 LTRLNSLDLGANQIAD--ISVLQNIPGLFSLDLRFSDVSVFQDFKGLTSLNLSSNQISSV 593
Query: 247 LE 248
E
Sbjct: 594 PE 595
>gi|281205906|gb|EFA80095.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
PN500]
Length = 1902
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 164/350 (46%), Gaps = 33/350 (9%)
Query: 62 VFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELD 121
+F HN + + +R EN + E + + LR L+++ C +++ L L+ L
Sbjct: 1346 LFAHNIQELSIRNENRISDEALVTFSCSQ-LRVLDLSSCSKISDQTFIQLPQCPQLESLI 1404
Query: 122 LSRCVKVTDAG-------MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
L C +TDA M L IS ++++TG+ + + S ++++ + L
Sbjct: 1405 LEACYNITDAAALNISQKMPSLRKISLKSCKFITDTGII-NIVQRCSKIEDMKLSRCHSL 1463
Query: 175 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISS 232
+ S Q+ LE +DL Q+S +L++ +L+ +NL+ +S
Sbjct: 1464 SDVAVEAISTQLSGVLERIDLSMCPQLSVESLITLLQLCTKLTAINLSENPKVNNEIVSI 1523
Query: 233 LEC-------LNLSNCTIDSILEGN-ENKAP------LAKISLAGTTFINEREAFLYIET 278
+ L L +CT + ++G E P + K ++ +F+N + L + +
Sbjct: 1524 ISNQFPGVIHLRLDSCTKITDIDGTLELSTPSLQTLSIKKSQISHQSFLNITASLLNLTS 1583
Query: 279 -SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNT 336
S+ S L +++ S S FLTQ LE+LD+S + + D+S++ + L++L++S
Sbjct: 1584 LSVKSCLQLTDLSFSSIGFLTQ---LEYLDISDNYRLLDNSMQSICKSLHRLKHLDISQC 1640
Query: 337 -RFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSM-MPSLKFIDIS 383
R S+ ++ HL LE L + G ++D A+ Y + + L+ IDIS
Sbjct: 1641 LRLSTKAFFMIGKHLTKLEELLMVGCASLNDTAVLYFAENLFMLRHIDIS 1690
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 176/417 (42%), Gaps = 87/417 (20%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL--SSLQNLSVLDLGGLPVT 177
LD+ C VT ++ L I L+K+ +S+ +T + +ALL ++Q LS+ + +
Sbjct: 1306 LDIQNCPMVTTENLRQLAQIPKLKKIDISKCKVTNEVVALLFAHNIQELSIRNENRISDE 1365
Query: 178 DLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
LV S ++L LDL S++S++ L P+L L L NI+ L
Sbjct: 1366 ALVTFS---CSQLRVLDLSSCSKISDQTFIQLPQCPQLESLILEACY-----NITDAAAL 1417
Query: 237 NLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIE----------TSLLSFLD 285
N+S K P L KISL FI + ++ + S D
Sbjct: 1418 NIS------------QKMPSLRKISLKSCKFITDTGIINIVQRCSKIEDMKLSRCHSLSD 1465
Query: 286 VSNSSLSRFCFLTQMKA-LEHLDLSSSMIGDDSVEMVAC---VGANLRNLNLS-NTRFSS 340
V+ ++S TQ+ LE +DL SM SVE + + L +NLS N + ++
Sbjct: 1466 VAVEAIS-----TQLSGVLERIDL--SMCPQLSVESLITLLQLCTKLTAINLSENPKVNN 1518
Query: 341 AGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
V I++ P + L L S T+I TDI G ++
Sbjct: 1519 EIVSIISNQFPGVIHLRLDSCTKI---------------------TDIDGTLE------- 1550
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNA-SLTDVSLHQLSS 457
LS +LQ L+++++Q+S + ++ + L LS+++ LTD+S +
Sbjct: 1551 --LSTPSLQT------LSIKKSQISHQSFLNITASLLNLTSLSVKSCLQLTDLSFSSIGF 1602
Query: 458 LSKLTNLSIRDA--VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 512
L++L L I D +L NS K LK LD+ L+ A K ++E
Sbjct: 1603 LTQLEYLDISDNYRLLDNSMQSICKSLHRLKHLDISQCLRLSTKAFFMIGKHLTKLE 1659
>gi|46447553|ref|YP_008918.1| hypothetical protein pc1919 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401194|emb|CAF24643.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 97
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
+ +A+L L+ L+++ C +T + LT +T L+ LDLS C K TD G+ HL +
Sbjct: 6 GDGLAHLAPLTALQHLDLSQCENLTDDGIAHLTSLTGLQHLDLSLCEKFTDDGLAHLAPL 65
Query: 140 STLEKLWLSET-GLTADGIALLSSLQNLSVLD 170
+ L+ L LS LT G+A L+ L L LD
Sbjct: 66 TALQHLNLSRCRNLTDAGLAHLTPLTALQYLD 97
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIAL 159
+ +T L L +T L+ LDLS+C +TD G+ HL S++ L+ L LS T DG+A
Sbjct: 2 QELTGDGLAHLAPLTALQHLDLSQCENLTDDGIAHLTSLTGLQHLDLSLCEKFTDDGLAH 61
Query: 160 LSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLD 194
L+ L L L+L +TD L L LT L+YLD
Sbjct: 62 LAPLTALQHLNLSRCRNLTDAGLAHLTPLTALQYLD 97
>gi|390604154|gb|EIN13545.1| RNI-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 515
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 189/441 (42%), Gaps = 67/441 (15%)
Query: 27 WRRQRRSLERLPAHLAD---SLLRHLIRRRLIFPSLLEVFKHNAEAIELRGE----NSVD 79
W Q++ LE LP H+ +++R + L P + + +I L E
Sbjct: 76 WESQKQWLEHLPDHIVPRLFAMMRAEVPDALTSP-FMTTYLLRGPSITLTSELLHVKKAT 134
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWA--LTGMTCLKELDLSRCVKVTDAGMKHLL 137
E + +GA L L + + S W + LK+L+L C KV DA + +
Sbjct: 135 VEAVGRVGA--ELTDLEITGQASIPEST-WVQLFKKLPSLKKLNLRGCTKV-DANVVATI 190
Query: 138 SIST--LEKLWLSETGLTADGIA-LLSSLQNLSVLDLGGLPV--TDLV----LRSLQVLT 188
S S L + L++T T IA L+ + +++ VL L G+ TD L ++
Sbjct: 191 SRSCRLLTSVNLNQTSATPASIAALVLACRDIEVLKLAGIQPNWTDAAFARFLSAVNETE 250
Query: 189 KLEYLDLWGSQVSNRGAA------VLKMFPRLSFLNLAWTGVTKLP------NISSLECL 236
E + L ++ G +LKM P L+ L+L++TG+ LP +I LE L
Sbjct: 251 GFELVKLRNLKLRQLGLGDASLHPLLKMVPNLNRLDLSFTGIRHLPKVDPDFSIPPLEKL 310
Query: 237 NLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 294
+L++ + D +L E+ L ++L R + S S L ++ + L
Sbjct: 311 SLTSTMVFTDDVLTAMEHLPRLKTLNLGALGASQGRASL-----SNSSALTMTPAMLRE- 364
Query: 295 CFLTQMKALEHLDLSS-SMIGDDSVEM----------VACVGANLRNLNLSNTRFSSAGV 343
LT + A DL S++G+ + M +A VG + LN++
Sbjct: 365 --LTSILAERCPDLEVVSLVGNTKLGMGSRDPAVRDFIAQVGRRCKTLNMAA--IPGLRS 420
Query: 344 GILAGHL------PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVG 395
G LAG L P +E L+LS T +DD A Y+S SL+ ++++ T G +
Sbjct: 421 GDLAGLLSEGEGPPRIETLNLSNTSVDDEAAQYISCCESLQTLEVAGTKFTPAGLFPIID 480
Query: 396 AETDL-VLSLTALQNLNHLER 415
A L L LT+ + + ++R
Sbjct: 481 ACEKLQTLDLTSCRGIKTVDR 501
>gi|255544119|ref|XP_002513122.1| glucose regulated repressor protein, putative [Ricinus communis]
gi|223548133|gb|EEF49625.1| glucose regulated repressor protein, putative [Ricinus communis]
Length = 407
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 164/373 (43%), Gaps = 70/373 (18%)
Query: 21 GESVQKWRR-QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEV-FKHNAEAIELRGENSV 78
G ++W R Q ++L A +L+ + R F L+E+ + G
Sbjct: 33 GLVCKRWLRLQSTERKKLAARAGPHMLQKMAAR---FSRLIELDLSQSVSRSFYPGVTDS 89
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHLL 137
D +++ F+YLR LN+ +C+ +T + + ++ G++ L+ LD+S C K+TD G+
Sbjct: 90 DLSVISH--GFQYLRVLNLQNCKGITDNGMRSIGCGLSSLQSLDVSYCRKLTDKGLS--- 144
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQV-LTKLEYLDL 195
A+ ++L +L L G +TD VL++L + L+ L L
Sbjct: 145 --------------------AVAGGCRDLRILHLAGCRFITDEVLKALSTSCSNLQELGL 184
Query: 196 WG-SQVSNRGAA-VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN-CT--------ID 244
G + +++ G ++ ++ FL+ + K NI + NLS C+ +D
Sbjct: 185 QGCTNITDSGVKDLVSGCKQIQFLD-----INKCSNIGDVGISNLSKACSSCLKTLKLLD 239
Query: 245 SILEGNENKAPLAKIS-------LAGTTFINEREAFLYIETSLLSF--------LDVSNS 289
G+E+ + LAK + G I+++ L S L++S+S
Sbjct: 240 CYKVGDESLSSLAKFCNNLETLIIGGCRDISDQSVKLLASACTNSLKNLRMDWCLNISDS 299
Query: 290 SLSRFCFLTQMKALEHLDLSSS-MIGDDSVEMVACV--GANLRNLNLSNT-RFSSAGVGI 345
SLS C LT+ + LE LD+ + D + +++ V L+ L +SN + + G+G
Sbjct: 300 SLS--CILTECRNLEALDIGCCEEVTDAAFQVLGTVENKLKLKVLKISNCPKITVTGIGR 357
Query: 346 LAGHLPNLEILSL 358
L LE L +
Sbjct: 358 LLEKCNVLEYLDV 370
>gi|260787625|ref|XP_002588853.1| hypothetical protein BRAFLDRAFT_99565 [Branchiostoma floridae]
gi|229274023|gb|EEN44864.1| hypothetical protein BRAFLDRAFT_99565 [Branchiostoma floridae]
Length = 848
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 163/398 (40%), Gaps = 43/398 (10%)
Query: 86 LGAFRYLRSLN-----VADCRRVTSSALWALTGMTCLKELDLS--RCVKVTDAGMKHLLS 138
L F YL SL D R + + L + +T L LDLS + D HL S
Sbjct: 104 LSDFSYLISLERPYLYTNDIRGLPAGVL---SQLTSLWWLDLSDNHIADLPDGVFSHLTS 160
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L LWL + + + S+L +L LDL + DL LT L YL L+ +
Sbjct: 161 ---LRYLWLFDNHIAHLPEGVFSNLTSLQGLDLSDNHIADLPDGVFSHLTSLRYLWLFDN 217
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-----ISSLECLNLSNCTIDSILEG-NEN 252
+++ V L L+L+ + LP+ ++SL L L + I + EG N
Sbjct: 218 HIAHLPEGVFSNLTSLQGLDLSDNHIADLPDGVFSHLTSLRYLWLFDNHIAHLPEGVFSN 277
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSS 310
L + L+ + + TS L ++ + N+++S + + L L LS
Sbjct: 278 LTSLQGLDLSDNHIADLPDGVFSHLTS-LKWIRLHNNNISSLPTGVFSHLTTLRDLYLSG 336
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+ I D + + + +L L + N +S G+ + HL +L+ LSLS I D
Sbjct: 337 NHIADLPDGVFSHL-TSLEQLYMFNNNITSLPTGVFS-HLTSLQGLSLSDNHIADLPDGV 394
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
S + SL+++ +SN +I V +L L+ LNL+ +S P
Sbjct: 395 FSHLTSLEWLKLSNNNISSLPTGV------------FSHLTRLDELNLDNNNISS---LP 439
Query: 431 LSTFKELIHLS----LRNASLTDVSLHQLSSLSKLTNL 464
F L L N D SL+ + + ++L L
Sbjct: 440 TGVFSHLTSLQELYIAGNPWRCDCSLYGVMTSTRLRGL 477
>gi|406830031|ref|ZP_11089625.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 306
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
D + LGA ++ SL+ +T A LT L L L+ + DA M +
Sbjct: 39 ADGKASGSLGADGHVVSLS---SHSMTDDAAKQLTAFPALTTLALTDS-PIGDAHMGVIG 94
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
+++ LE L L T +T G+ +SSL++L L+L G VTD L SL LT+L L+L
Sbjct: 95 ALTQLESLALDHTQVTDAGLQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLND 154
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNL----SNCTIDSILEGNE 251
+Q++ G L RL L L T V +P +S LE L + T I+
Sbjct: 155 TQINGLGLVYLSKLNRLEALYLQNTVVDFESIPPLSGLESLKILHLAGTKTGGGIVRAIT 214
Query: 252 NKAPLAKISLAGTTFINE 269
L ++ L GT+ +E
Sbjct: 215 GLPSLERLYLNGTSIKDE 232
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 60/315 (19%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
L ADG A S + V+ L +TD + L L L L S + + V+
Sbjct: 37 LEADGKASGSLGADGHVVSLSSHSMTDDAAKQLTAFPALTTLALTDSPIGDAHMGVIGAL 96
Query: 212 PRLSFLNLAWTGVTK--LPNISSLEC---LNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
+L L L T VT L +ISSLE LNL+ C S+ +G SLAG T
Sbjct: 97 TQLESLALDHTQVTDAGLQSISSLEHLRELNLAGC---SVTDGGLG-------SLAGLT- 145
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
E + L+ D + L +L+++ LE L L ++++ +S+ ++ +
Sbjct: 146 ----------ELTSLNLNDTQINGLG-LVYLSKLNRLEALYLQNTVVDFESIPPLSGL-E 193
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
+L+ L+L+ T+ V + G LP+LE L L+GT I D I P+L +
Sbjct: 194 SLKILHLAGTKTGGGIVRAITG-LPSLERLYLNGTSIKDEDI------PALAAV------ 240
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
QN H + L +E+T +SDA L P+ +L +L +
Sbjct: 241 -------------------LAQNCPHFKGLFVEKTALSDAALEPMHPLADLKEFTLIHVH 281
Query: 447 LTDVSLHQLSSLSKL 461
T V+ + L KL
Sbjct: 282 GTKVTKDGVVRLRKL 296
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAETDLVLSLTALQNLNH 412
++SLS + D A ++ P+L + ++++ I + +GA L
Sbjct: 52 HVVSLSSHSMTDDAAKQLTAFPALTTLALTDSPIGDAHMGVIGA-------------LTQ 98
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
LE L L+ TQV+DA L +S+ + L L+L S+TD L L+ L++LT+L++ D +
Sbjct: 99 LESLALDHTQVTDAGLQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLNDTQIN 158
Query: 473 NSGL 476
GL
Sbjct: 159 GLGL 162
>gi|325109499|ref|YP_004270567.1| hypothetical protein Plabr_2946 [Planctomyces brasiliensis DSM
5305]
gi|324969767|gb|ADY60545.1| leucine-rich repeat cysteine-containing subtype [Planctomyces
brasiliensis DSM 5305]
Length = 381
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 33/305 (10%)
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSI- 246
+D G +VS L P+L L N + + S LE L+L C + +
Sbjct: 79 VDFIGKEVSPEALEALAKLPKLRSLLLRESNAGDDALIAVGKCSQLENLDLRECPVSNAG 138
Query: 247 ---LEGNENKAPLAKISLAGTTFINER-----EAFLYIETSLLSFLDVSNSSLSRFCFLT 298
L G E L +G T +++ ++ L FL +S L + LT
Sbjct: 139 LAHLVGLEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLT 198
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILS 357
++ L L+S+++GD+ ++ ++ LR L +S ++ S G+ ++ L LE L
Sbjct: 199 DLR---ELYLASTLVGDEDLKALSQF-PELRKLRVSKLSQLSGQGIQEIS-QLSKLEELD 253
Query: 358 LS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+S + + + IS +S + L +++ I G E L L L L
Sbjct: 254 VSEDSSLSNDDISSLSKLTKLTKLNLWRVPIS----DAGVEH--------LAPLTKLTWL 301
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
NL+ TQ+SDA L L KEL L L + +++ L QLS L L L + + G+
Sbjct: 302 NLDNTQLSDAGLSTLKEMKELKFLHLGSTQISNAGLPQLSELKSLDKLVVTRTAVNQEGV 361
Query: 477 GSFKP 481
+P
Sbjct: 362 DKLQP 366
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 39/296 (13%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR---CVKV 128
LR N+ D +A +G L +L++ +C V+++ L L G+ LK L LS V
Sbjct: 105 LRESNAGDDALIA-VGKCSQLENLDLRECP-VSNAGLAHLVGLEKLKALRLSGQSGATTV 162
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
D GM+ + + L+ L L ++ DG+ L L +L L L V D L++L
Sbjct: 163 DDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELYLASTLVGDEDLKALSQFP 222
Query: 189 KLEYLDLWG-SQVSNRGAAVLKMFPRLSFLN------LAWTGVTKLPNISSLECLNLSNC 241
+L L + SQ+S +G + +L L+ L+ ++ L ++ L LNL
Sbjct: 223 ELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDISSLSKLTKLTKLNLWRV 282
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQ 299
I G E+ APL K L++L++ N+ LS L +
Sbjct: 283 PISDA--GVEHLAPLTK----------------------LTWLNLDNTQLSDAGLSTLKE 318
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
MK L+ L L S+ I + + ++ + +L L ++ T + GV L LP+ EI
Sbjct: 319 MKELKFLHLGSTQISNAGLPQLSEL-KSLDKLVVTRTAVNQEGVDKLQPELPDTEI 373
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 127/274 (46%), Gaps = 15/274 (5%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+V+ ++ L + L L L E+ D + + L LDL PV++ L L
Sbjct: 85 EVSPEALEALAKLPKLRSLLLRESNAGDDALIAVGKCSQLENLDLRECPVSNAGLAHLVG 144
Query: 187 LTKLEYLDLWG----SQVSNRGAAVLKMFPR-----LSFLNLAWTGVTKLPNISSLECLN 237
L KL+ L L G + V + G + P+ L FL ++ G+ +L ++ L L
Sbjct: 145 LEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELY 204
Query: 238 LSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS-NSSLSR-- 293
L++ + D L+ L K+ ++ + ++ + + S L LDVS +SSLS
Sbjct: 205 LASTLVGDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDD 264
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
L+++ L L+L I D VE +A + L LNL NT+ S AG+ L + L
Sbjct: 265 ISSLSKLTKLTKLNLWRVPISDAGVEHLAPL-TKLTWLNLDNTQLSDAGLSTLK-EMKEL 322
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
+ L L TQI + + +S + SL + ++ T +
Sbjct: 323 KFLHLGSTQISNAGLPQLSELKSLDKLVVTRTAV 356
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVA-CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
L ++ L L L S GDD++ V C + L NL+L S+AG+ L G L L+
Sbjct: 94 LAKLPKLRSLLLRESNAGDDALIAVGKC--SQLENLDLRECPVSNAGLAHLVG-LEKLKA 150
Query: 356 LSLSG----TQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQQVGAETDL---------- 400
L LSG T +DD + ++ +P LK + + I G +QQ+ TDL
Sbjct: 151 LRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELYLASTLV 210
Query: 401 -----------------------VLSLTALQNLNHLERLNL----EQTQVSDATLFPLST 433
LS +Q ++ L +L E + +S+ + LS
Sbjct: 211 GDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDISSLSK 270
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+L L+L ++D + L+ L+KLT L++ + L+++GL + K + LK L L
Sbjct: 271 LTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFLHL 327
>gi|340376197|ref|XP_003386620.1| PREDICTED: f-box/LRR-repeat protein 13-like [Amphimedon
queenslandica]
Length = 820
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT---CLKELDLSR 124
+ + L G + + + LG + + SLN+ADC RV+ + + + L+EL+L+
Sbjct: 526 QVVYLAGCTKISDQGLKSLGHLKKIHSLNLADCSRVSDAGVRYIVEHNSGPVLRELNLTN 585
Query: 125 CVKVTDAG-MKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLR 182
C K++D ++ L L LS +D G+ LL+ L NL LD+ G +TDL +
Sbjct: 586 CAKISDVTPLRIAQHCRNLMYLNLSFCEHISDTGVELLTQLSNLVDLDVTGCSLTDLGVI 645
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
+L KL +L L S+V A++KM L+ L + ++ + L L++
Sbjct: 646 ALGQNKKLMHLGL--SEVDVTDDAIIKMAKGLNNLQIINLSCCEVKHFILNPPLALTDAC 703
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREA-FLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+ ++ N L K+ LA + + A +L + + +D+S +S++ +
Sbjct: 704 VQAL---AFNCQLLIKVYLAACPHLGDSTAKYLAQGCTWVQHIDLSGTSITD-------Q 753
Query: 302 ALEHLDLSSSMIGDDSVEMVACV 324
AL HL S + +++++CV
Sbjct: 754 ALRHLGKSCHHLT--QLDILSCV 774
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 160/386 (41%), Gaps = 60/386 (15%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLS-SLQNLSVLDLGGL 174
L L L +CV +T K++ L+ L LSE G+T + I ++ S L L+L
Sbjct: 317 LGHLSLQKCVLLTSDSFKYIGQCQNLQDLNLSECQGITDEAIKSIAISCSGLFYLNLSYC 376
Query: 175 PVTDLVLRSLQVLTK-LEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
VTD ++R L + L YL L +Q + +G + LA G KL
Sbjct: 377 YVTDSIIRLLTKYCRSLNYLSLSNCTQFTGKGLQSI----------LAGEGCRKLVY--- 423
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
L+LS C ++S FI + L+ T L D+ + S+
Sbjct: 424 ---LDLSACV---------------QLSTEALLFIGQGCPILHTLT-LDDITDLVDESII 464
Query: 293 RFCFLTQMKALEHLDL-SSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHL 350
F +T L H L SS + D + + +A L+ + N S + LA
Sbjct: 465 NF--VTHCHTLRHFSLLGSSSLTDRAFKHLALENRKLKTFKVENNDHISDLSLRALAKSC 522
Query: 351 PNLEILSLSG-TQIDDY---AISYMSMMPSLKFID---ISNTDIKGFIQQVG-------- 395
+L+++ L+G T+I D ++ ++ + SL D +S+ ++ ++
Sbjct: 523 RDLQVVYLAGCTKISDQGLKSLGHLKKIHSLNLADCSRVSDAGVRYIVEHNSGPVLRELN 582
Query: 396 ----AETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDV 450
A+ V L Q+ +L LNL + +SD + L+ L+ L + SLTD+
Sbjct: 583 LTNCAKISDVTPLRIAQHCRNLMYLNLSFCEHISDTGVELLTQLSNLVDLDVTGCSLTDL 642
Query: 451 SLHQLSSLSKLTNLSIRDAVLTNSGL 476
+ L KL +L + + +T+ +
Sbjct: 643 GVIALGQNKKLMHLGLSEVDVTDDAI 668
>gi|290978242|ref|XP_002671845.1| predicted protein [Naegleria gruberi]
gi|284085417|gb|EFC39101.1| predicted protein [Naegleria gruberi]
Length = 439
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 160/386 (41%), Gaps = 45/386 (11%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKEL---DLSRCVKVTDAGMKHLLSISTLEKLW 146
++L ++ ++ L+ CLK L D+S +++D +KH +++ L L
Sbjct: 72 KFLERVSNFTVKKNEEGNLFNCQIFECLKNLTRIDISD-NEISDERVKHFGNLTHLTNLV 130
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
++ + +G L L L+ L++G + + + L L LD+ + + +RGA
Sbjct: 131 INCNDIGVEGAKCLCQLNQLTRLNIGNNSLETEGAKYISELKNLTKLDIARNCIGDRGAQ 190
Query: 207 VLKMFPRLSFLNLAWTGVTKL-----PNISSLECLNLSNCTIDSILEGNENKAPLAKISL 261
+ +L+ LNL G+ L + L L++SN I G+E ++K+
Sbjct: 191 FITEMKQLTSLNLNRNGIEYLGAKFISEMYQLTSLDISNNDI-----GSEGAKQISKLDQ 245
Query: 262 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 321
+I + +N +++MK L +LD+S + I + + +
Sbjct: 246 LTKLYIYD-----------------NNIGDEGAMHISEMKQLTNLDISRNDIDSEGAKSI 288
Query: 322 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 381
C L NLN+ + G ++ + NL IL + +I ++S M L +
Sbjct: 289 -CELYQLTNLNICSNYIGETGAKHIS-EMNNLTILEIGSNEIGSEGAYHISRMHQLTRLM 346
Query: 382 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 441
I DI + GA+ + + L +L++ + D +S K+L +L
Sbjct: 347 IFANDIG----EKGAK--------HVSEMKQLTKLDIYDNNIGDEGTIHISEMKQLTYLD 394
Query: 442 LRNASLTDVSLHQLSSLSKLTNLSIR 467
+ ++ + L++LT L++
Sbjct: 395 VSANNIGHEGAEYIRKLNRLTFLNVH 420
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 41/231 (17%)
Query: 281 LSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
L+ L++ N+SL +++++K L LD++ + IGD + +
Sbjct: 150 LTRLNIGNNSLETEGAKYISELKNLTKLDIARNCIGDRGAQFIT---------------- 193
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
+ L L+L+ I+ ++S M L +DISN DI G+E
Sbjct: 194 ----------EMKQLTSLNLNRNGIEYLGAKFISEMYQLTSLDISNNDI-------GSE- 235
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+ L+ L +L + + D +S K+L +L + + + L
Sbjct: 236 ----GAKQISKLDQLTKLYIYDNNIGDEGAMHISEMKQLTNLDISRNDIDSEGAKSICEL 291
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 509
+LTNL+I + +G +L +L++ + +E A +MH
Sbjct: 292 YQLTNLNICSNYIGETGAKHISEMNNLTILEIGSNEIGSEGA-YHISRMHQ 341
>gi|148228501|ref|NP_001083845.1| F-box and leucine-rich repeat protein 14 [Xenopus laevis]
gi|50603939|gb|AAH77430.1| Fbl13 protein [Xenopus laevis]
Length = 400
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 152/331 (45%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C++VT S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRTLNLSLCKQVTDSSLGRIAQYLKGLQV 147
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 148 LELGGCTNITNTGLLLIAWGLHGLKSLNLRSCRHVSDVGIGHLAGMTRSAA--EGCLSLE 205
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ L L
Sbjct: 206 QLTLQDCQKLTDLALKHI------SRGLQGLRVL-NLSFCGGISDAGLLHLSHMGGLRSL 258
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 259 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 298
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 299 YIAQGLYGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 358
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 359 TGIDLYGCTRITKKGLERITQLPCLKVLNLG 389
>gi|383852952|ref|XP_003701989.1| PREDICTED: F-box/LRR-repeat protein 14-like [Megachile rotundata]
Length = 479
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 23/169 (13%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L L
Sbjct: 289 LEHLSLQDCQRLSDEALRHISIGLTTLKSINLSFCVCITDSGVKHLAKMSSLRELNLRSC 348
Query: 148 ---SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVS 201
S+ G+ A+G + +SSL ++S D + D L + Q L L+ L L Q+S
Sbjct: 349 DNISDIGMAYLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLKSLSLSACQIS 403
Query: 202 NRG-AAVLKMFPRLSFLNLAWTG-------VTKLPNISSLECLNLSNCT 242
+ G + K L LN+ T ++ L+C++L CT
Sbjct: 404 DEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCT 452
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 163/406 (40%), Gaps = 112/406 (27%)
Query: 27 WR--RQRRSLERLPAHLADSLLRHLIRRRLIFP---SLLEVFKH--NAEAIELRG-ENSV 78
WR R L + L SL+R ++R + L +V + N EA+ L G N
Sbjct: 130 WRGVEARLHLRKQAPALFASLVRRGVKRVQVLSLRRGLGDVLRGVPNLEALNLSGCYNIT 189
Query: 79 DAEWM-AYLGAFRYLRSLNVADCRRVTSSALWAL--------------------TGMTC- 116
DA + A+ + L LN++ C++V+ +L + TG+ C
Sbjct: 190 DAGLINAFCQEYSTLTELNLSLCKQVSDISLGRIVQYLKNLEHLELGGCCNITNTGLLCI 249
Query: 117 ------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
LK LDL C +V+D G+ HL G+ + +L++LS+ D
Sbjct: 250 AWNLKKLKRLDLRSCWQVSDLGIAHL-------------AGVNREAAGGNFALEHLSLQD 296
Query: 171 LGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVLKMFPRLSF-LNLAWTGVTKLP 228
L +D LR + + LT L+ ++ LSF + + +GV L
Sbjct: 297 CQRL--SDEALRHISIGLTTLKSIN-------------------LSFCVCITDSGVKHLA 335
Query: 229 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
+SSL LNL +C IS G ++ E S +S LDVS
Sbjct: 336 KMSSLRELNLRSCD---------------NISDIGMAYLAE-------GGSRISSLDVS- 372
Query: 289 SSLSRFCFLTQMKALEH----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TR 337
FC +AL H L LS+ I D+ + +A +L LN+ +R
Sbjct: 373 -----FCDKIGDQALVHISQGLFNLKSLSLSACQISDEGICKIAKTLHDLETLNIGQCSR 427
Query: 338 FSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDI 382
+ G+ +A + +L+ + L G T+I + + +P L +++
Sbjct: 428 LTDKGLYTIAESMKHLKCIDLYGCTRISTNGLERIMKLPQLSTLNL 473
>gi|22748931|ref|NP_689654.1| F-box/LRR-repeat protein 14 [Homo sapiens]
gi|386782025|ref|NP_001247451.1| F-box/LRR-repeat protein 14 [Macaca mulatta]
gi|390467358|ref|XP_003733751.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 2 [Callithrix
jacchus]
gi|402884767|ref|XP_003905846.1| PREDICTED: F-box/LRR-repeat protein 14 [Papio anubis]
gi|441670511|ref|XP_004092204.1| PREDICTED: F-box/LRR-repeat protein 14 [Nomascus leucogenys]
gi|48428083|sp|Q8N1E6.1|FXL14_HUMAN RecName: Full=F-box/LRR-repeat protein 14; AltName: Full=F-box and
leucine-rich repeat protein 14
gi|20381419|gb|AAH28132.1| F-box and leucine-rich repeat protein 14 [Homo sapiens]
gi|119609334|gb|EAW88928.1| F-box and leucine-rich repeat protein 14, isoform CRA_a [Homo
sapiens]
gi|312150528|gb|ADQ31776.1| F-box and leucine-rich repeat protein 14 [synthetic construct]
gi|355563880|gb|EHH20380.1| F-box and leucine-rich repeat protein 14 [Macaca mulatta]
gi|384945426|gb|AFI36318.1| F-box/LRR-repeat protein 14 [Macaca mulatta]
gi|410217776|gb|JAA06107.1| F-box and leucine-rich repeat protein 14 [Pan troglodytes]
Length = 418
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 148 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 205
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 206 QLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSL 258
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 259 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 298
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 299 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 358
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 359 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|356536441|ref|XP_003536746.1| PREDICTED: F-box/LRR-repeat protein 2-like [Glycine max]
Length = 419
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 167/359 (46%), Gaps = 42/359 (11%)
Query: 21 GESVQKWRR-QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSV- 78
G ++W R Q ++L A +LR + R F L+E+ A+++ V
Sbjct: 44 GLVCKRWLRLQSTERKKLAARAGPHMLRKMADR---FTRLVEL--DLAQSVSRSFYPGVT 98
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHLL 137
D++ AF L+ LN+ +C+ +T + + A+ G++ L+ LD+S C K+TD G+ +
Sbjct: 99 DSDLAVIATAFTCLKILNLHNCKGITDAGMKAIGEGLSLLQSLDVSYCRKLTDKGLSAVA 158
Query: 138 -SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGL-PVTDLVLRSLQV-LTKLEY 192
L L ++ DG+ AL +NL L L G +TD L +L ++ +
Sbjct: 159 KGCCDLRILHMAGCRFVNDGVLEALSKYCRNLEELGLQGCTSITDNGLINLASGCRQIRF 218
Query: 193 LDL-WGSQVSNRGA-----AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LD+ S VS+ G A L L+ G + +I+ C NL I
Sbjct: 219 LDINKCSNVSDVGVSSFSSACSSSLKTLKLLDCYKIGDETILSIAEF-CGNLET----LI 273
Query: 247 LEGNENKAPLAKISLA---GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ G + + A SLA G++ N R + L+ S+SSLS C L+Q + L
Sbjct: 274 IGGCRDVSADAIKSLATACGSSLKNLRMDWC---------LNTSDSSLS--CVLSQCRNL 322
Query: 304 EHLDLSSS-MIGDDSVEMVAC--VGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 358
E LD+ + D + ++++ G +L+ L +SN + + AG+GI+ G +L+ L +
Sbjct: 323 EALDIGCCEELTDAAFQLMSNEEPGLSLKILKVSNCPKITVAGIGIIVGKCTSLQYLDV 381
>gi|417302467|ref|ZP_12089567.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327541207|gb|EGF27751.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 341
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKID 249
Query: 245 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L+ E K L +++ I E + I L L + +S+S L Q+K L
Sbjct: 250 NESLKAFEGKTSLTVLNVDNCPAITEEAIPVIISLPHLKLLHLGKTSVSPDA-LPQLKPL 308
Query: 304 EHLD 307
+ L+
Sbjct: 309 QELE 312
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
S G + LPNL+ L + G DD +S +P+L + +T + V AE
Sbjct: 106 SDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAE-- 163
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 ----------LNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
++ + AL + + + DD ++A + L++++L N+ + + ++ LP L L
Sbjct: 137 ISGLPALVAVTFQDTSVTDDGASVLAELN-ELQDVSLMNSPVTDKTLASIS-TLPKLTKL 194
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LESLELAETDF-------GPE-----GMPAIANIEGLEKI 241
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
NL T++ + +L L L++ N ++T+ ++ + SL L L + ++
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIISLPHLKLLHLGKTSVSPDA 301
Query: 476 LGSFKPPRSLKLL 488
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|224110020|ref|XP_002333160.1| predicted protein [Populus trichocarpa]
gi|222835013|gb|EEE73462.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 23/337 (6%)
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
+L NL LDL + + +L +L+ L ++DL G+Q++ + L +L+L
Sbjct: 268 NLTNLEYLDLSSNILGGSIPSTLGLLSNLNFVDLLGNQINGPIPLKIGNLTNLQYLHLGG 327
Query: 222 TGVT-----KLPNISSLECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINEREAFLY 275
+T L N+ SL L+LS+ I+ SI +N L ++ L+ + + L
Sbjct: 328 NKITGFIPFSLGNLKSLTMLDLSHNQINGSIPLEIQNLTNLKELYLSSNSISGSIPSTLG 387
Query: 276 IETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
+ ++L+S LD+S++ ++ L + +L LDLS + I + S + NL+ L L
Sbjct: 388 LLSNLIS-LDLSDNQITGLIPFLLGNLTSLIILDLSHNQI-NGSTPLETQNLTNLKELYL 445
Query: 334 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 393
S+ S + L G L NL L LS QI + + SL +D+S+ I G
Sbjct: 446 SSNSISGSIPSTL-GLLSNLISLDLSDNQITGLIPFLLGNLTSLIILDLSHNQING---S 501
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
ET QNL +L+ L L +S + L L L L N +T +
Sbjct: 502 TPLET---------QNLTNLKELYLSSNSISGSIPSTLGLLSNLTFLDLSNNQITGLIPF 552
Query: 454 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L +L+ LT L + + S S K +L LDL
Sbjct: 553 LLDNLTNLTTLYLSHNQINGSIPSSLKYCNNLAYLDL 589
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
NS+ + LG L SL+++D ++T + L +T L LDLS ++ +
Sbjct: 448 NSISGSIPSTLGLLSNLISLDLSD-NQITGLIPFLLGNLTSLIILDLSHN-QINGSTPLE 505
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+++ L++L+LS ++ + L L NL+ LDL +T L+ L LT L L L
Sbjct: 506 TQNLTNLKELYLSSNSISGSIPSTLGLLSNLTFLDLSNNQITGLIPFLLDNLTNLTTLYL 565
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLS 239
+Q++ + LK L++L+L++ + ++L ++ SL+ +N S
Sbjct: 566 SHNQINGSIPSSLKYCNNLAYLDLSFNNLSEEIPSELYDLDSLQYVNFS 614
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 166/373 (44%), Gaps = 48/373 (12%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N ++L G N ++ +G L+ L++ ++T ++L + L LDLS
Sbjct: 295 NLNFVDLLG-NQINGPIPLKIGNLTNLQYLHLGG-NKITGFIPFSLGNLKSLTMLDLSHN 352
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
++ + + +++ L++L+LS ++ + L L NL LDL +T L+ L
Sbjct: 353 -QINGSIPLEIQNLTNLKELYLSSNSISGSIPSTLGLLSNLISLDLSDNQITGLIPFLLG 411
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-KLPN----ISSLECLNLSN 240
LT L LDL +Q++ + L L L+ ++ +P+ +S+L L+LS+
Sbjct: 412 NLTSLIILDLSHNQINGSTPLETQNLTNLKELYLSSNSISGSIPSTLGLLSNLISLDLSD 471
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL-TQ 299
I ++ FL + L LD+S++ ++ L TQ
Sbjct: 472 NQITGLI------------------------PFLLGNLTSLIILDLSHNQINGSTPLETQ 507
Query: 300 -MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
+ L+ L LSS+ I S+ + +NL L+LSN + + + L +L NL L L
Sbjct: 508 NLTNLKELYLSSNSI-SGSIPSTLGLLSNLTFLDLSNNQITGL-IPFLLDNLTNLTTLYL 565
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 418
S QI+ S + +L ++D+S ++ +++ +E L +L+ L+ +N
Sbjct: 566 SHNQINGSIPSSLKYCNNLAYLDLSFNNLS---EEIPSE---------LYDLDSLQYVNF 613
Query: 419 EQTQVSDATLFPL 431
+S + PL
Sbjct: 614 SYNNLSGSVSLPL 626
>gi|406830084|ref|ZP_11089678.1| hypothetical protein SpalD1_00552 [Schlesneria paludicola DSM
18645]
Length = 249
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L+ LDL V+D G+K L +S L L L+ TG+ G+ L L L L L G +
Sbjct: 113 LETLDLE-LSDVSDEGLKSLGRLSQLRGLGLNHTGIADIGLGYLRPLTGLQGLHLDGTKI 171
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
TD ++ LQ ++ L+ L L + VS+ G VL L LNLA + VT+ +S +
Sbjct: 172 TDAGVKHLQSMSHLQILKLSNTLVSDAGVEVLFDLHELQILNLAESRVTRRGFVSLRQA- 230
Query: 237 NLSNCTIDSILE 248
L NC + I +
Sbjct: 231 -LPNCELPVIFD 241
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 395 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 454
G TD V+ L L HLE L+LE + VSD L L +L L L + + D+ L
Sbjct: 97 GKNTDRVVPSLCL--LKHLETLDLELSDVSDEGLKSLGRLSQLRGLGLNHTGIADIGLGY 154
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L L+ L L + +T++G+ + L++L L
Sbjct: 155 LRPLTGLQGLHLDGTKITDAGVKHLQSMSHLQILKL 190
>gi|296123881|ref|YP_003631659.1| serine/threonine protein kinase-related protein [Planctomyces
limnophilus DSM 3776]
gi|296016221|gb|ADG69460.1| Serine/threonine protein kinase-related protein [Planctomyces
limnophilus DSM 3776]
Length = 1655
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 188/472 (39%), Gaps = 67/472 (14%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCL--------------------KELDLSRCVKVTDA 131
L L ++ C +VT +A+ +T L + LDL ++T
Sbjct: 1195 LTHLELSQCEKVTGAAIRKFKHLTHLEAWAVPVGDDDLAPLKDNPFRNLDLG-GTRITGK 1253
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
+ ++S L L+ T + +A L L+ L L + D +R + L L
Sbjct: 1254 ALAAFTNLSDLRSSRLAFTSIKNKDLAALKDCHRLTFLALYNTGIGDEGVREICELKALR 1313
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDSILEG 249
L+L GS+V+N L P L ++L +T VT + + + L C +
Sbjct: 1314 SLELQGSKVTNEVFFYLMKLPHLLSVDLRYTQVTPEAIESFRKQKPLCEVKCDAGVLPRW 1373
Query: 250 NENKAPLAK---ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
N L K A F+ ++ +++++ + L + L F +LE L
Sbjct: 1374 EPNGDELVKNAKADRAAAAFVLKQGKYVWLDNA-KDPLHGDPAILPPHLFKLTGISLEGL 1432
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE------ILSLSG 360
++ D C NL +L L N +GI HL E L L G
Sbjct: 1433 ---KTLTPRDFEIFKGC--QNLSDLQLLN-------MGITDEHLRAFEGTTSITKLKLDG 1480
Query: 361 TQIDDYAISYMSMMPSLKFIDI--SNTDIKGFIQQVGAETDLVL----------SLTALQ 408
+ +SY S L F+ + + D K FIQ + + L S+ A +
Sbjct: 1481 QAVTSKGLSYFSGCKRLTFLSVWATQADDK-FIQSIASPDYTYLNLGGTRITDASIAAFE 1539
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
+L +LE L T ++D + L++ + L +L L + LTD S L++L L++ +
Sbjct: 1540 SLQNLEMATLNFTGLTDEGIEHLASAENLTYLGLNHTRLTDASAKVFLKLNQLEELTLSN 1599
Query: 469 AVLTNSGL----GSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV-WH 515
++ GL + + L LL+ +T D++ +F +HP+ + W+
Sbjct: 1600 TQFSDQGLLLLVNALPNLKRLNLLETK----VTADSVDKFQSLHPKCRILWN 1647
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 180/470 (38%), Gaps = 90/470 (19%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
IE R + +DA+ R L + + ++ + L L + L L+LS+C KV
Sbjct: 1148 GIEFRNKRDLDAKDFEVFSGCRDLEKVRLG-FSSISDAHLKPLENLPKLTHLELSQCEKV 1206
Query: 129 TDAGMKHLLSISTLE--------------------KLWLSETGLTADGIALLSSLQNLSV 168
T A ++ ++ LE L L T +T +A ++L +L
Sbjct: 1207 TGAAIRKFKHLTHLEAWAVPVGDDDLAPLKDNPFRNLDLGGTRITGKALAAFTNLSDLRS 1266
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--- 225
L + + L +L+ +L +L L+ + + + G + L L L + VT
Sbjct: 1267 SRLAFTSIKNKDLAALKDCHRLTFLALYNTGIGDEGVREICELKALRSLELQGSKVTNEV 1326
Query: 226 -----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL-AGT--------------- 264
KLP++ S++ L + T ++I E + PL ++ AG
Sbjct: 1327 FFYLMKLPHLLSVD-LRYTQVTPEAI-ESFRKQKPLCEVKCDAGVLPRWEPNGDELVKNA 1384
Query: 265 -------TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
F+ ++ +++++ + L + L F +LE L ++ D
Sbjct: 1385 KADRAAAAFVLKQGKYVWLDNAK-DPLHGDPAILPPHLFKLTGISLEGL---KTLTPRDF 1440
Query: 318 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE------ILSLSGTQIDDYAISYM 371
C NL +L L N +GI HL E L L G + +SY
Sbjct: 1441 EIFKGC--QNLSDLQLLN-------MGITDEHLRAFEGTTSITKLKLDGQAVTSKGLSYF 1491
Query: 372 SMMPSLKFIDI--SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
S L F+ + + D K FIQ + A D LNL T+++DA++
Sbjct: 1492 SGCKRLTFLSVWATQADDK-FIQSI-ASPDYTY-------------LNLGGTRITDASIA 1536
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
+ + L +L LTD + L+S LT L + LT++ F
Sbjct: 1537 AFESLQNLEMATLNFTGLTDEGIEHLASAENLTYLGLNHTRLTDASAKVF 1586
>gi|397499401|ref|XP_003820442.1| PREDICTED: F-box/LRR-repeat protein 14 [Pan paniscus]
Length = 561
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 49/333 (14%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 251 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 307
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKL----WLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+L C +T+ G+ LL L++L S L+ GI L+ + + G L
Sbjct: 308 LELGGCSNITNTGL--LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLG 363
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLE 234
+ L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL
Sbjct: 364 LEQLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLR 416
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D V + SL+
Sbjct: 417 SLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA- 458
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 459 --YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 516
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 517 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 549
>gi|344278047|ref|XP_003410808.1| PREDICTED: F-box/LRR-repeat protein 14 [Loxodonta africana]
Length = 514
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYHLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 148 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 205
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 206 QLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSL 258
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 259 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 298
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 299 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 358
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 359 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL-------------- 137
LR LN++ C ++ + L L+ M L+ L+L C ++D G+ HL
Sbjct: 230 LRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFC 289
Query: 138 -------------SISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLGG-LPVTDLVLR 182
+ L+ L L ++ DGI ++ + L L++G + +TD L
Sbjct: 290 DKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLE 349
Query: 183 SL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+ + L++L +DL+G ++++ RG + P L LNL +T SS E
Sbjct: 350 LIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKTSSRE 403
>gi|332661885|ref|YP_004451355.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
gi|332337382|gb|AEE54482.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1141
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 168/405 (41%), Gaps = 106/405 (26%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT-------------- 153
L+ L+ + LK ++LSR + HL ++S L+ + T L+
Sbjct: 129 LYPLSNLIYLKHINLSRTRLPNLVTLGHLSNLSFLDLSYTQVTDLSDLSTLSNLNSLNLS 188
Query: 154 ---ADGIALLSSLQNLSVLDLGGLPVTDLV--------------------LRSLQVLTKL 190
+ LS+L NLS LDL V+DL LRSL+ L L
Sbjct: 189 DTQVSDLDALSALSNLSFLDLSFTQVSDLSGLSTLSNLSSLNLRDTYSSDLRSLRPLINL 248
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN 250
L L ++VS+ +VL LS L+L++T V+ L +S+L
Sbjct: 249 SDLKLSSTEVSD--LSVLAHLHNLSSLHLSYTQVSDLSALSAL----------------- 289
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
S LSFLD+S++ +S L+ + L L+LS+
Sbjct: 290 ----------------------------SNLSFLDLSDTQVSDLSALSALYNLSFLNLSN 321
Query: 311 SMIGDDSVEMVACVGANLRN-LNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDY- 366
+ I D S LR+ LNLS SS + L HL NL ++L+ T D
Sbjct: 322 TQISDLSA---------LRHLLNLSIIDLSSTELTDLTTLRHLQNLNSINLNKTHASDLS 372
Query: 367 AISYMSMMPSLKFIDISNTDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
A+S +S + L D +D+ + + V L+AL NL +L L+L T
Sbjct: 373 ALSNLSNLSELYLSDTQASDLSALSALFNLNSLNLSYTQVSGLSALANLQNLSSLDLGDT 432
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+V D L PL+ + L L L + + D+S + +LSKL L++
Sbjct: 433 EVFD--LSPLANLQNLSSLDLSDTEVVDLS--PMINLSKLKYLNL 473
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L R+L++LN + + +S L AL+ ++ L EL LS + + L ++++L
Sbjct: 349 LTTLRHLQNLNSINLNKTHASDLSALSNLSNLSELYLSDTQASDLSALSALFNLNSLNLS 408
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ +GL+A L++LQNLS LDLG V D L L L L LDL ++V +
Sbjct: 409 YTQVSGLSA-----LANLQNLSSLDLGDTEVFD--LSPLANLQNLSSLDLSDTEVVDLSP 461
Query: 206 AVLKMFPRLSFLNLAWTGVTKLP 228
+ +L +LNL+ T + LP
Sbjct: 462 MI--NLSKLKYLNLSSTPILHLP 482
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 190/445 (42%), Gaps = 104/445 (23%)
Query: 46 LRHLIRRRLIFPSLLEVFK-HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVT 104
L+H+ R P+L+ + N ++L D L L +LN +
Sbjct: 138 LKHINLSRTRLPNLVTLGHLSNLSFLDLSYTQVTD------LSDLSTLSNLNSLNLSDTQ 191
Query: 105 SSALWALTGMTCLKELDLSRCVKVTD--------------------AGMKHLLSISTLEK 144
S L AL+ ++ L LDLS +V+D + ++ L + L
Sbjct: 192 VSDLDALSALSNLSFLDLS-FTQVSDLSGLSTLSNLSSLNLRDTYSSDLRSLRPLINLSD 250
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS T ++ +++L+ L NLS L L V+D L +L L+ L +LDL +QVS+
Sbjct: 251 LKLSSTEVS--DLSVLAHLHNLSSLHLSYTQVSD--LSALSALSNLSFLDLSDTQVSDLS 306
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 264
A L LSFLNL+ T ++ L + L LN
Sbjct: 307 A--LSALYNLSFLNLSNTQISDLSALRHL--LN--------------------------- 335
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
LS +D+S++ L+ L ++ L ++L+ + D S
Sbjct: 336 ----------------LSIIDLSSTELTDLTTLRHLQNLNSINLNKTHASDLS---ALSN 376
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
+NL L LS+T+ ++ + L+ L NL L+LS TQ+ +S ++ + +L +D+ +
Sbjct: 377 LSNLSELYLSDTQ--ASDLSALSA-LFNLNSLNLSYTQVS--GLSALANLQNLSSLDLGD 431
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
T+ V L+ L NL +L L+L T+V D L P+ +L +L+L +
Sbjct: 432 TE--------------VFDLSPLANLQNLSSLDLSDTEVVD--LSPMINLSKLKYLNLSS 475
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDA 469
+ + +L L KLT L +RD
Sbjct: 476 TPILHLPF-ELLFLPKLTKLDLRDT 499
>gi|320170313|gb|EFW47212.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
Length = 1198
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 146/349 (41%), Gaps = 59/349 (16%)
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
TLE+L LS TG+T+ + S L L L L +T + + L+ L +L L GS +
Sbjct: 66 TLEQLSLSNTGITSVPVNAFSQLTKLEFLSLAYTAITSIASGAFTNLSHLTFLGLSGSLL 125
Query: 201 SNRGAAVLKMFPRLSFLNL-----------AWTGVTKL-------PNISSLECLNLSNCT 242
N A P L L L AWTG+T L P +S++ S T
Sbjct: 126 VNLPAGAFNGAPNLELLYLAETKLTAIPSSAWTGLTALRYLYIDSPQLSTISANAFSGLT 185
Query: 243 -IDSILEGN-----------ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
+ ++L GN E L +SL G + + + ++ L LD+SN++
Sbjct: 186 ALTTLLVGNPAYRYISPNAFEGLPALRTLSLTGCSITSLSDG-IFNGLDELETLDMSNTA 244
Query: 291 LS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
++ F LT ++ L S I + ++L +L LS T +S G
Sbjct: 245 VTILPADAFAGLTALQDLLLDGSSLLSI----PTQIFPALSSLESLTLSGTNITSIGPNA 300
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 405
G L +L L LS TQI A + + +PSL+ + +SN+ I V
Sbjct: 301 FVG-LSSLTTLDLSNTQIASIAPNAFAGLPSLRSLRLSNSPITSLPPNV----------- 348
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS---LRNASLTDVS 451
L L+ L+L+ T + T P F+ L +L+ L+N + D S
Sbjct: 349 -FSTLTQLQTLSLQATSL---TTLPPGLFQGLFNLATVQLQNNNFDDNS 393
>gi|22328596|ref|NP_193118.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|19347839|gb|AAL86331.1| putative disease resistance protein [Arabidopsis thaliana]
gi|28827260|gb|AAO50474.1| unknown protein [Arabidopsis thaliana]
gi|110742628|dbj|BAE99226.1| disease resistance like protein [Arabidopsis thaliana]
gi|332657929|gb|AEE83329.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 719
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 58/370 (15%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCR---RVTSSALWALTGMTCLKELDLSR---CVK 127
G N+ +G+ +YLR L++ DC ++ SS L +T L LDLS +
Sbjct: 116 GSNNFSGILPDSIGSLKYLRVLSLGDCNLFGKIPSS----LGNLTYLTNLDLSVNDFTGE 171
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ D+ M HL + L +L L L+ + ++L +L L+++DLG ++ ++ L
Sbjct: 172 LPDS-MGHL---NKLTELHLGSAKLSGNFPSMLLNLSELTLIDLGSNQFGGMLPSNMSSL 227
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTID 244
+KL Y + + S + L M P L+ L L + G NISS SN +
Sbjct: 228 SKLVYFGIDRNSFSGSIPSSLFMLPSLTSLVLGRNDFNGPLDFGNISSP-----SNLGVL 282
Query: 245 SILEGNENKAPLAKIS-LAGTTFIN-----------EREAFLYIETSLLSFLDVS---NS 289
S+LE N N IS L G +++ + FL++++ L+FLD+S
Sbjct: 283 SLLENNFNGPIPESISKLVGLFYLDLSLWNTKRGMVDFNTFLHLKS--LTFLDLSYINTR 340
Query: 290 SLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
S+ + + +L +LDLS ++ ++ + + +G + SS +
Sbjct: 341 SMVDISIFSPLLSLGYLDLSGINLKISSTLSLPSPMGTLI---------LSSCNIPEFPN 391
Query: 349 HLPN---LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF------IQQVGAETD 399
L N L L +S +I ++ +P L++++IS GF IQ+ G
Sbjct: 392 FLENQTTLYYLDISANKIGGQVPQWLWSLPELQYVNISQNSFSGFEGPADVIQRCGELLM 451
Query: 400 LVLSLTALQN 409
L +S Q+
Sbjct: 452 LDISSNTFQD 461
>gi|48096980|ref|XP_393659.1| PREDICTED: f-box/LRR-repeat protein 14 [Apis mellifera]
gi|380017700|ref|XP_003692785.1| PREDICTED: F-box/LRR-repeat protein 14-like [Apis florea]
Length = 481
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 23/169 (13%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L L
Sbjct: 291 LEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLRELNLRSC 350
Query: 148 ---SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVS 201
S+ G+ A+G + +SSL ++S D + D L + Q L L+ L L Q+S
Sbjct: 351 DNVSDIGMAYLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLKLLSLSACQIS 405
Query: 202 NRG-AAVLKMFPRLSFLNLAWTG-------VTKLPNISSLECLNLSNCT 242
+ G + K L LN+ T ++ L+C++L CT
Sbjct: 406 DEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCT 454
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 137/302 (45%), Gaps = 54/302 (17%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLL--SISTLEKLWLSETGLTADGIAL---LSSLQN 165
L G+ L+ L+LS C +TDAG+ + +TL +L LS +D I+L + L+N
Sbjct: 173 LKGVPNLEALNLSGCYNITDAGLINAFCQEYTTLTELNLSLCKQVSD-ISLGRIVQYLKN 231
Query: 166 LSVLDLGGL-PVTD----LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR------L 214
L L+LGG +T+ + +L+ L +L+ W QVS+ G A L R L
Sbjct: 232 LEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCW--QVSDLGIAHLAGVNREAAGGNL 289
Query: 215 SFLNLAWTGVTKLPN---------ISSLECLNLSNCTI--DSILEGNENKAPLAKISLAG 263
+ +L+ +L + +++L+ +NLS C DS L+ + L +++L
Sbjct: 290 ALEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLRELNLRS 349
Query: 264 TTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 322
+++ A+L S +S LDVS FC IGD ++ ++
Sbjct: 350 CDNVSDIGMAYLAEGGSRISSLDVS------FC---------------DKIGDQALVHIS 388
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ--IDDYAISYMSMMPSLKFI 380
NL+ L+LS + S G+ +A L +LE L++ D + M LK I
Sbjct: 389 QGLFNLKLLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCI 448
Query: 381 DI 382
D+
Sbjct: 449 DL 450
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 164/407 (40%), Gaps = 112/407 (27%)
Query: 27 WR--RQRRSLERLPAHLADSLLRHLIRRRLIFP---SLLEVFKH--NAEAIELRG-ENSV 78
WR R L + L SL+R ++R + L +V K N EA+ L G N
Sbjct: 132 WRGVEARLHLRKQAPALFASLVRRGVKRVQVLSLRRGLGDVLKGVPNLEALNLSGCYNIT 191
Query: 79 DAEWM-AYLGAFRYLRSLNVADCRRVTSSALWALT--------------------GMTC- 116
DA + A+ + L LN++ C++V+ +L + G+ C
Sbjct: 192 DAGLINAFCQEYTTLTELNLSLCKQVSDISLGRIVQYLKNLEHLELGGCCNITNGGLLCI 251
Query: 117 ------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
LK LDL C +V+D G+ HL ++ A G L +L++LS+ D
Sbjct: 252 AWNLKKLKRLDLRSCWQVSDLGIAHLAGVNR-----------EAAGGNL--ALEHLSLQD 298
Query: 171 LGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVLKMFPRLSF-LNLAWTGVTKLP 228
L +D LR + + LT L+ ++ LSF + + +G+ L
Sbjct: 299 CQRL--SDEALRHVSIGLTTLKSIN-------------------LSFCVCITDSGLKHLA 337
Query: 229 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
+SSL LNL +C +S G ++ E S +S LDVS
Sbjct: 338 KMSSLRELNLRSCD---------------NVSDIGMAYLAE-------GGSRISSLDVS- 374
Query: 289 SSLSRFCFLTQMKALEH----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TR 337
FC +AL H L LS+ I D+ + +A +L LN+ +R
Sbjct: 375 -----FCDKIGDQALVHISQGLFNLKLLSLSACQISDEGICKIAKTLHDLETLNIGQCSR 429
Query: 338 FSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ G+ +A + +L+ + L G T+I + + +P L +++
Sbjct: 430 LTDKGLYTIAESMKHLKCIDLYGCTRISTNGLERIMKLPQLSTLNLG 476
>gi|290980799|ref|XP_002673119.1| predicted protein [Naegleria gruberi]
gi|284086700|gb|EFC40375.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 170/402 (42%), Gaps = 43/402 (10%)
Query: 96 NVADCRRVTSSALW---ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
NVA+ R + + + L M LK+L++ K+ +G K++ S+ L L+++
Sbjct: 10 NVANLRVIENEGGFNCEILDSMKELKKLNIEFNSKIDPSGFKYICSLEQLTDLYMTFCYF 69
Query: 153 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 212
D L SL++L+ L + G + + + + +L+ L + + + GA +
Sbjct: 70 GFDIAKHLPSLKSLTYLLITGNYIGVEGAKYIGEMKQLKQLHIANNNIGPEGAKYISGLE 129
Query: 213 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 272
+L+FLN+ +T +D +E K L + + G +E
Sbjct: 130 QLTFLNIRANEIT-----------------MDGAKFISEMK-QLTGLKIVGNNICDEGAK 171
Query: 273 FLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANL 328
F+ L+ LD++++++ ++++M + LD+ + I D V C G L
Sbjct: 172 FIS-GMKQLTNLDIASNNIGENGAKYVSEMMNIRKLDIGFNSINDG----VKCFGEMKQL 226
Query: 329 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 388
+LN+++ G ++ L LS++ I Y ++S M +L +DIS+ I+
Sbjct: 227 TDLNVNSCCIGLDGTKYISS-FNQLTHLSIAENLITPYGAIHISQMKNLIKLDISDNRIR 285
Query: 389 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 448
+ ++ +N L LN+ ++ + + L +L + + ++
Sbjct: 286 DN------------GVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNIG 333
Query: 449 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+ S +Q+S + L LSI + + G L LD+
Sbjct: 334 EKSANQISEMKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDI 375
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 164/420 (39%), Gaps = 97/420 (23%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E Y+G + L+ L++A+ + G K+
Sbjct: 91 NYIGVEGAKYIGEMKQLKQLHIANNN--------------------------IGPEGAKY 124
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + +T DG +S ++ L+ L + G + D + + + +L LD+
Sbjct: 125 ISGLEQLTFLNIRANEITMDGAKFISEMKQLTGLKIVGNNICDEGAKFISGMKQLTNLDI 184
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTIDSILEGNE 251
+ + GA + + L++ + GV + L LN+++C
Sbjct: 185 ASNNIGENGAKYVSEMMNIRKLDIGFNSINDGVKCFGEMKQLTDLNVNSCC--------- 235
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLS 309
I L GT +I+ +F + L+ L ++ + ++ + ++QMK L LD+S
Sbjct: 236 -------IGLDGTKYIS---SF-----NQLTHLSIAENLITPYGAIHISQMKNLIKLDIS 280
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ I D+ V+ ++ + L L++S I I
Sbjct: 281 DNRIRDNGVQSIS--------------------------EMNQLTELNVSSIDITPIGIQ 314
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
Y+ M +L ++ I++ +I G + S + + HL +L++ V D
Sbjct: 315 YICKMDNLTYLIIAHNNI-------GEK-----SANQISEMKHLAQLSIYHNAVGDEGAK 362
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
+S ++L L + + D + LS + +LT L+ D +++ G K R + L D
Sbjct: 363 FISEMEQLTFLDIGYNEIGDEGVKALSGMKQLTRLNAVDNNISDEGE---KYIREMNLAD 419
>gi|406833162|ref|ZP_11092756.1| hypothetical protein SpalD1_16026 [Schlesneria paludicola DSM
18645]
Length = 447
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L+ +K L L L++S+I D VE + L L+LS+ + GV + +L L+ L
Sbjct: 128 LSGLKGLTSLALTNSVINDSGVETIVKSFPELTELDLSSNTNMTNGVVKIISNLGKLQRL 187
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+L QI+D +S + L+ +D+ G D+ L + A L HL+
Sbjct: 188 TLVQNQINDIGAQRLSKLQELRSLDLRGNMEAG---------DMTLEVVA--GLPHLQSF 236
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-------RDA 469
T V+D+ L LS + L L L++ +TD S L+ LSKL+ L I D
Sbjct: 237 KHRSTAVNDSGLEYLSQGQALESLLLQDFVITDQSGPHLAKLSKLSQLEIFRCQGFGSDG 296
Query: 470 VLTNSGLG 477
VL G+G
Sbjct: 297 VLALKGMG 304
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 155/329 (47%), Gaps = 30/329 (9%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
I ++ +++ +E + G L+ L + +CR + + L+G+ L L L+ V +
Sbjct: 87 IVIQDGSNLQSEDLVLFGKLSDLKKLQIFNCRTLNDEMVAQLSGLKGLTSLALTNSV-IN 145
Query: 130 DAGMKHLL-SISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
D+G++ ++ S L +L L S T +T + ++S+L L L L + D+ + L L
Sbjct: 146 DSGVETIVKSFPELTELDLSSNTNMTNGVVKIISNLGKLQRLTLVQNQINDIGAQRLSKL 205
Query: 188 TKLEYLDLWGS-QVSNRGAAVLKMFPRL-SFLNLAW----TGVTKLPNISSLECLNLSNC 241
+L LDL G+ + + V+ P L SF + + +G+ L +LE L L +
Sbjct: 206 QELRSLDLRGNMEAGDMTLEVVAGLPHLQSFKHRSTAVNDSGLEYLSQGQALESLLLQDF 265
Query: 242 TIDSILEGNENKAPLAKISLA--------GTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
I + + A L+K+S G+ + + I +L +V + ++
Sbjct: 266 VITD--QSGPHLAKLSKLSQLEIFRCQGFGSDGVLALKGMGLIRLTLRDLPNVDDRAMEV 323
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT----RFSSAGVGILAGH 349
F L Q++ L +L+S +GD ++ + A L++L L + + + V +++
Sbjct: 324 FDDLPQLRRLYLHELTS--VGDAGLKHL----AGLKSLELLDIWTVPQMTDETVDVIS-Q 376
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLK 378
LPNL+ LS+ T + D AI + M SL+
Sbjct: 377 LPNLKDLSIRVTGVTDSAIDKLLTMKSLQ 405
>gi|229149630|ref|ZP_04277861.1| Internalin [Bacillus cereus m1550]
gi|228633840|gb|EEK90438.1| Internalin [Bacillus cereus m1550]
Length = 766
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VMPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 342 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 398
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 399 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 456
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRD 468
++D+S +S+L KL LS IRD
Sbjct: 457 ISDLS--PVSNLKKLVFLSFVANEIRD 481
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 54/192 (28%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L L V+N+ + F +K L HL L + D M NL +L+LSN + ++
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFAD---VMPLVKMDNLESLDLSNNKITN 306
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
V L + N++ L LSG QI+D
Sbjct: 307 --VAPLT-EMKNVKSLFLSGNQIED----------------------------------- 328
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 ---VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDIKP 375
Query: 461 LTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 376 LYTLPLKDLVLT 387
>gi|350417674|ref|XP_003491538.1| PREDICTED: F-box/LRR-repeat protein 14-like [Bombus impatiens]
Length = 485
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 23/169 (13%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L L
Sbjct: 295 LEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLRELNLRSC 354
Query: 148 ---SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVS 201
S+ G+ A+G + +SSL ++S D + D L + Q L L+ L L Q+S
Sbjct: 355 DNISDIGMAYLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLKLLSLSACQIS 409
Query: 202 NRG-AAVLKMFPRLSFLNLAWTG-------VTKLPNISSLECLNLSNCT 242
+ G + K L LN+ T ++ L+C++L CT
Sbjct: 410 DEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCT 458
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 54/302 (17%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLL--SISTLEKLWLSETGLTADGIAL---LSSLQN 165
L G+ L+ L+LS C +TD G+ + +TL +L LS +D I+L + L+N
Sbjct: 177 LKGVPNLEALNLSGCYNITDVGLINAFCQEYATLIELNLSLCKQVSD-ISLGRIVQYLKN 235
Query: 166 LSVLDLGGL-PVTD----LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR------L 214
L L+LGG +T+ + +L+ L +L+ W QVS+ G A L R L
Sbjct: 236 LEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCW--QVSDLGIAHLAGVNRESAGGNL 293
Query: 215 SFLNLAWTGVTKLPN---------ISSLECLNLSNCTI--DSILEGNENKAPLAKISLAG 263
+ +L+ +L + +++L+ +NLS C DS L+ + L +++L
Sbjct: 294 ALEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLRELNLRS 353
Query: 264 TTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 322
I++ A+L S +S LDVS FC IGD ++ ++
Sbjct: 354 CDNISDIGMAYLAEGGSRISSLDVS------FC---------------DKIGDQALVHIS 392
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ--IDDYAISYMSMMPSLKFI 380
NL+ L+LS + S G+ +A L +LE L++ D + M LK I
Sbjct: 393 QGLFNLKLLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCI 452
Query: 381 DI 382
D+
Sbjct: 453 DL 454
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 126/310 (40%), Gaps = 77/310 (24%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L L + C +T+ L + + LK LDL C +V+D G+ HL
Sbjct: 233 LKNLEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHL----------- 281
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAA 206
G+ + +L++LS+ D L +D LR + + LT L+ ++
Sbjct: 282 --AGVNRESAGGNLALEHLSLQDCQRL--SDEALRHVSIGLTTLKSIN------------ 325
Query: 207 VLKMFPRLSF-LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
LSF + + +G+ L +SSL LNL +C IS G
Sbjct: 326 -------LSFCVCITDSGLKHLAKMSSLRELNLRSCD---------------NISDIGMA 363
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH----------LDLSSSMIGD 315
++ E S +S LDVS FC +AL H L LS+ I D
Sbjct: 364 YLAE-------GGSRISSLDVS------FCDKIGDQALVHISQGLFNLKLLSLSACQISD 410
Query: 316 DSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSM 373
+ + +A +L LN+ +R + G+ +A + +L+ + L G T+I + +
Sbjct: 411 EGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNGLERIMK 470
Query: 374 MPSLKFIDIS 383
+P L +++
Sbjct: 471 LPQLSTLNLG 480
>gi|290984031|ref|XP_002674731.1| predicted protein [Naegleria gruberi]
gi|284088323|gb|EFC41987.1| predicted protein [Naegleria gruberi]
Length = 356
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 29/253 (11%)
Query: 249 GNENKAPLAKISLAGTTFI--NE--REAFLYI-ETSLLSFLDVS--NSSLSRFCFLTQMK 301
GNE ++K+ +I NE E YI E + L LD+S N + +++++K
Sbjct: 111 GNEGAKYISKLKQLTHLYILNNEIDDEGAKYISELNQLVSLDISYNNIGVEGAKYISELK 170
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
L +LD+S + IG + + +A + L LN+S G + G L L L++
Sbjct: 171 QLTNLDISVNHIGAEGAQHIAEMNQ-LTILNISTNNIGYEGAKYI-GKLKQLTCLTIFNN 228
Query: 362 QIDDYAISYMSMMPSLKFIDIS--NTDIKG--FIQQVGAETDLVLSLTALQNLNHLERLN 417
ID Y+S M L ++IS N D++G +I ++ TDL +S+
Sbjct: 229 NIDVEGAKYISEMKQLTDLNISYNNIDVEGAKYISELKQLTDLDISIN------------ 276
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 477
Q+ + ++ +L LS + ++ D +S + +LTNL I + ++N G+
Sbjct: 277 ----QIGAKGVQYIAEMNQLTILSASHNNIGDEGAKYISEMKQLTNLDISNNSISNEGVK 332
Query: 478 SFKPPRSLKLLDL 490
+ + L +L++
Sbjct: 333 CIEEMKHLTVLNI 345
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 67/261 (25%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++ D G K++ ++ L L +S + +G +S L+ L+ LD + V + Q
Sbjct: 133 EIDDEGAKYISELNQLVSLDISYNNIGVEGAKYISELKQLTNLD---ISVNHIGAEGAQH 189
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 246
+ ++ L + +S N+ + G + + L CL + N ID
Sbjct: 190 IAEMNQLTIL----------------NISTNNIGYEGAKYIGKLKQLTCLTIFNNNID-- 231
Query: 247 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
+ G +I+E + + S + +DV + +++++K L L
Sbjct: 232 --------------VEGAKYISEMKQLTDLNIS-YNNIDVEGAK-----YISELKQLTDL 271
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
D+S + IG V+ +A + L ILS S I D
Sbjct: 272 DISINQIGAKGVQYIA--------------------------EMNQLTILSASHNNIGDE 305
Query: 367 AISYMSMMPSLKFIDISNTDI 387
Y+S M L +DISN I
Sbjct: 306 GAKYISEMKQLTNLDISNNSI 326
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E Y+G + L L + + A + ++ M L +L++S + G K+
Sbjct: 204 NNIGYEGAKYIGKLKQLTCLTIFNNNIDVEGAKY-ISEMKQLTDLNISYN-NIDVEGAKY 261
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +S + A G+ ++ + L++L + D + + + +L LD+
Sbjct: 262 ISELKQLTDLDISINQIGAKGVQYIAEMNQLTILSASHNNIGDEGAKYISEMKQLTNLDI 321
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNL 219
+ +SN G ++ L+ LN+
Sbjct: 322 SNNSISNEGVKCIEEMKHLTVLNI 345
>gi|340728038|ref|XP_003402339.1| PREDICTED: f-box/LRR-repeat protein 14-like [Bombus terrestris]
Length = 485
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 23/174 (13%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L
Sbjct: 290 GGNLALEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLREL 349
Query: 146 WL------SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLW 196
L S+ G+ A+G + +SSL ++S D + D L + Q L L+ L L
Sbjct: 350 NLRSCDNISDIGMAYLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLKLLSLS 404
Query: 197 GSQVSNRG-AAVLKMFPRLSFLNLAWTG-------VTKLPNISSLECLNLSNCT 242
Q+S+ G + K L LN+ T ++ L+C++L CT
Sbjct: 405 ACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCT 458
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 54/302 (17%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLL--SISTLEKLWLSETGLTADGIAL---LSSLQN 165
L G+ L+ L+LS C +TD G+ + +TL +L LS +D I+L + L+N
Sbjct: 177 LKGVPNLEALNLSGCYNITDVGLINAFCQEYATLIELNLSLCKQVSD-ISLGRIVQYLKN 235
Query: 166 LSVLDLGGL-PVTD----LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR------L 214
L L+LGG +T+ + +L+ L +L+ W QVS+ G A L R L
Sbjct: 236 LEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCW--QVSDLGIAHLAGVNRESAGGNL 293
Query: 215 SFLNLAWTGVTKLPN---------ISSLECLNLSNCTI--DSILEGNENKAPLAKISLAG 263
+ +L+ +L + +++L+ +NLS C DS L+ + L +++L
Sbjct: 294 ALEHLSLQDCQRLSDEALRHVSIGLTTLKSINLSFCVCITDSGLKHLAKMSSLRELNLRS 353
Query: 264 TTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 322
I++ A+L S +S LDVS FC IGD ++ ++
Sbjct: 354 CDNISDIGMAYLAEGGSRISSLDVS------FC---------------DKIGDQALVHIS 392
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ--IDDYAISYMSMMPSLKFI 380
NL+ L+LS + S G+ +A L +LE L++ D + M LK I
Sbjct: 393 QGLFNLKLLSLSACQISDEGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCI 452
Query: 381 DI 382
D+
Sbjct: 453 DL 454
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 126/310 (40%), Gaps = 77/310 (24%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L L + C +T+ L + + LK LDL C +V+D G+ HL
Sbjct: 233 LKNLEHLELGGCCNITNGGLLCIAWNLKKLKRLDLRSCWQVSDLGIAHL----------- 281
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAA 206
G+ + +L++LS+ D L +D LR + + LT L+ ++
Sbjct: 282 --AGVNRESAGGNLALEHLSLQDCQRL--SDEALRHVSIGLTTLKSIN------------ 325
Query: 207 VLKMFPRLSF-LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
LSF + + +G+ L +SSL LNL +C IS G
Sbjct: 326 -------LSFCVCITDSGLKHLAKMSSLRELNLRSCD---------------NISDIGMA 363
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH----------LDLSSSMIGD 315
++ E S +S LDVS FC +AL H L LS+ I D
Sbjct: 364 YLAE-------GGSRISSLDVS------FCDKIGDQALVHISQGLFNLKLLSLSACQISD 410
Query: 316 DSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSM 373
+ + +A +L LN+ +R + G+ +A + +L+ + L G T+I + +
Sbjct: 411 EGICKIAKTLHDLETLNIGQCSRLTDKGLYTIAESMKHLKCIDLYGCTRISTNGLERIMK 470
Query: 374 MPSLKFIDIS 383
+P L +++
Sbjct: 471 LPQLSTLNLG 480
>gi|218232900|ref|YP_002366112.1| internalin [Bacillus cereus B4264]
gi|218160857|gb|ACK60849.1| putative internalin [Bacillus cereus B4264]
Length = 760
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VMPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 393 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRD 468
++D+S +S+L KL LS IRD
Sbjct: 451 ISDLS--PVSNLKKLVFLSFVANEIRD 475
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 54/192 (28%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L L V+N+ + F +K L HL L + D M NL +L+LSN + ++
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFAD---VMPLVKMDNLESLDLSNNKITN 300
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
V L + N++ L LSG QI+D
Sbjct: 301 --VAPLT-EMKNVKSLFLSGNQIED----------------------------------- 322
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 ---VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDIKP 369
Query: 461 LTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 370 LYTLPLKDLVLT 381
>gi|302761780|ref|XP_002964312.1| hypothetical protein SELMODRAFT_142102 [Selaginella moellendorffii]
gi|300168041|gb|EFJ34645.1| hypothetical protein SELMODRAFT_142102 [Selaginella moellendorffii]
Length = 603
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 182/426 (42%), Gaps = 66/426 (15%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS-ISTLEKLWLSE- 149
L ++++ C V L L + +++L L+ C++VTD G++ L + L+ L L
Sbjct: 88 LVEMDLSYCSYVEDDGLLGLARLNRIEKLKLTGCIRVTDMGLESLAAGCHRLKTLVLKGC 147
Query: 150 TGLTADGIALLSSL-QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAV 207
+T GI L+++ + L +LDL VTD ++ + L L L+L G + V +R +
Sbjct: 148 VAITDAGIKLVAARSEELMILDLSFTEVTDEGVKYVSELKALRTLNLMGCNNVGDRALSY 207
Query: 208 L----KMFPRLSF---LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
L K L N++ G+ LP + +L + S T D+ L+ E + +
Sbjct: 208 LQENCKSLVDLDVSRCQNVSSVGIAALPTLLTLHLCHCSQVTEDAFLD-FEKPNGIQTLR 266
Query: 261 LAGTTFIN---EREAFLYIETSLLSFLD---VSNSSLSRFCFLTQMKALEHLDL------ 308
L G F + +R A E LS V++ + R +T K L+ LDL
Sbjct: 267 LDGCEFTHDSLDRVAAGCQELKELSLCKSRGVTDKRIDR--LITSCKFLKKLDLTCCFDV 324
Query: 309 ---------------------SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
SS M+ D+S+ MV L L++++ + AG+ +
Sbjct: 325 TEISLLSIARSSTSIKSLKLESSLMVTDNSLPMVFESCHLLEELDVTDCNLTGAGLEPI- 383
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSM----MPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
G+ L +L L+ I DY I ++ + L + G I V DL
Sbjct: 384 GNCVLLRVLKLAFCNISDYGIFFVGAGCHKLMELDLYRCRSVGDAGVISVVNGCQDL--- 440
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL-TDVSLHQLSS-LSKL 461
+ NL++ R +SDA++ ++ +L L +R +L T L Q+++ +L
Sbjct: 441 --RVLNLSYCSR-------ISDASMTAIARLSKLSQLEIRGCTLVTSDGLTQVAAGCKRL 491
Query: 462 TNLSIR 467
L I+
Sbjct: 492 VELDIK 497
>gi|291392871|ref|XP_002712822.1| PREDICTED: F-box/LRR-repeat protein 14-like [Oryctolagus cuniculus]
Length = 400
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 49/333 (14%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWL----SETGLTADGIALLSSLQNLSVLDLGGLP 175
L+L C +T+ G+ LL L++L S L+ GI L+ + + G L
Sbjct: 148 LELGGCSNITNTGL--LLIAWGLQRLKTLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLG 203
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLE 234
+ L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL
Sbjct: 204 LEQLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLR 256
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D V + SL+
Sbjct: 257 SLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA- 298
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 299 --YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 356
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 357 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|18204097|gb|AAH21329.1| F-box and leucine-rich repeat protein 14 [Mus musculus]
Length = 400
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 49/333 (14%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKL----WLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+L C +T+ G+ LL L++L S L+ GI L+ + + G L
Sbjct: 148 LELGGCSNITNTGL--LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLG 203
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLE 234
+ L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL
Sbjct: 204 LEQLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLR 256
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D V + SL+
Sbjct: 257 SLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA- 298
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 299 --YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 356
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 357 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|430746594|ref|YP_007205723.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
gi|430018314|gb|AGA30028.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
Length = 170
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
RV + + L + ELDL K+TDAG+K L + +L L L TG+T G+A L+
Sbjct: 32 RVGDAGMAQLASHPGIAELDL-HGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLA 90
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
+ L LDLG ++D ++ L L+ LD+ + V++R ++ F RL +N
Sbjct: 91 GMDRLERLDLGYTKISD---AGIEHLKGLKGLDIVETNVTDRSIPIIGGFERLEAINPRG 147
Query: 222 TGVTK 226
+ +T+
Sbjct: 148 SKITE 152
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L+ L + NTR AG+ LA H P + L L GT+I D + + M SL + + T I
Sbjct: 23 LKRLAIENTRVGDAGMAQLASH-PGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGI 81
Query: 388 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
TD L L ++ LERL+L T++SDA + K L L + ++
Sbjct: 82 ----------TDA--GLAHLAGMDRLERLDLGYTKISDAG---IEHLKGLKGLDIVETNV 126
Query: 448 TDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
TD S+ + +L ++ R + +T +G
Sbjct: 127 TDRSIPIIGGFERLEAINPRGSKITEAG 154
Score = 53.5 bits (127), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 102 RVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS 161
++T + L L GM L L L R +TDAG+ HL + LE+L L T ++ GI L
Sbjct: 56 KITDAGLKPLKGMKSLVHLSL-RATGITDAGLAHLAGMDRLERLDLGYTKISDAGIEHLK 114
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL-KMFPRL 214
L+ L +++ VTD + + +LE ++ GS+++ G L KM P+L
Sbjct: 115 GLKGLDIVETN---VTDRSIPIIGGFERLEAINPRGSKITEAGEEQLRKMLPKL 165
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
+ L+L T+++DA L PL K L+HLSLR +TD L L+ + +L L + ++
Sbjct: 47 IAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLAGMDRLERLDLGYTKIS 106
Query: 473 NSGLGSFKPPRSLKLLDLH---------GGW-----------LLTEDAILQFCKMHPRIE 512
++G+ K + L +++ + GG+ +TE Q KM P+++
Sbjct: 107 DAGIEHLKGLKGLDIVETNVTDRSIPIIGGFERLEAINPRGSKITEAGEEQLRKMLPKLD 166
Query: 513 VWH 515
+ H
Sbjct: 167 IDH 169
Score = 47.0 bits (110), Expect = 0.030, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
L+RL +E T+V DA + L++ + L L +TD L L + L +LS+R +T
Sbjct: 23 LKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGIT 82
Query: 473 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 506
++GL L+ LDL G+ DA ++ K
Sbjct: 83 DAGLAHLAGMDRLERLDL--GYTKISDAGIEHLK 114
Score = 43.9 bits (102), Expect = 0.25, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
LS L++L + T + G+A L+S ++ LDL G +TD L+ L+ + L +L L
Sbjct: 18 LSAVVLKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLR 77
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+ +++ G A L RL L+L +T ++
Sbjct: 78 ATGITDAGLAHLAGMDRLERLDLGYTKIS 106
>gi|290984930|ref|XP_002675179.1| predicted protein [Naegleria gruberi]
gi|284088774|gb|EFC42435.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 14/281 (4%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
M L LD+ R + G + + + L +L ++ + G +S L L+ LD+
Sbjct: 53 MKHLTHLDI-RNNGIGYEGAQSIGKVMQLTRLCIAGNNIGEKGAKSISQLTQLTTLDVSF 111
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 228
+ D + + L++L L++ G++++++GA L L FLN++ G+ L
Sbjct: 112 NQLCDYGTKFISQLSRLTDLNIRGNRITDKGAIFLSDLKELRFLNISSNTILLEGIKSLT 171
Query: 229 NISSLECLNLS-NCTIDSILEGNENKAPLAKISLAGTTF--INEREAFLYI-ETSLLSFL 284
N+ L L++S N + S + L ++L+ + ++ YI E L L
Sbjct: 172 NLKQLTQLDISYNNILPSYAQTISEMDQLTNLNLSYNDYGWGSDSNGVRYICEMKNLKTL 231
Query: 285 DVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
+ ++ F + +MK L L++ SS IG S ++++ + L L++S G
Sbjct: 232 TFGGICIRQYIFNYIKEMKQLACLNIRSSYIGSSSAKLISSMNQ-LTELDISYNEIGDVG 290
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
++ + L L++ G +I+ Y+ M L +++IS
Sbjct: 291 AKHIS-EMDQLTSLNVEGCRINSEGTEYLKQMKQLTYLNIS 330
>gi|301617436|ref|XP_002938142.1| PREDICTED: f-box/LRR-repeat protein 14-like [Xenopus (Silurana)
tropicalis]
Length = 400
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 141/308 (45%), Gaps = 37/308 (12%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKHLL-SIST 141
A++ LRSLN++ C++VT S+L + + L+ L+L C +T+ G+ + +
Sbjct: 111 AFVQEIGSLRSLNLSLCKQVTDSSLGRIAQYLKGLQVLELGGCTNITNTGLLLIAWGLHG 170
Query: 142 LEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L+ L L +D GI L+ + + G L + L L+ Q LT L +
Sbjct: 171 LKSLNLRSCRHVSDVGIGHLAGMTRSAA--EGCLGLEQLTLQDCQKLTDLSLKHI----- 223
Query: 201 SNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
+RG L++ LSF ++ G+ L ++ L LNL +C D+I + + +
Sbjct: 224 -SRGLQGLRVL-NLSFCGGISDAGLLHLSHMGGLRSLNLRSC--DNISDTGIMHLAMGSL 279
Query: 260 SLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQ-MKALEHLDLSSSMIGDDS 317
L+G +SF D V + SL+ ++ Q + L+ L L S I DD
Sbjct: 280 RLSGLD---------------VSFCDKVGDQSLA---YIAQGLYGLKSLSLCSCHISDDG 321
Query: 318 VEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMP 375
+ + LR LN+ R + G+ ++A HL L + L G T+I + ++ +P
Sbjct: 322 INRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKKGLERITQLP 381
Query: 376 SLKFIDIS 383
LK +++
Sbjct: 382 CLKVLNLG 389
>gi|301756605|ref|XP_002914145.1| PREDICTED: f-box/LRR-repeat protein 14-like [Ailuropoda
melanoleuca]
Length = 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 49/333 (14%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKL----WLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+L C +T+ G+ LL L++L S L+ GI L+ + + G L
Sbjct: 148 LELGGCSNITNTGL--LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLG 203
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLE 234
+ L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL
Sbjct: 204 LEQLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLR 256
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D V + SL+
Sbjct: 257 SLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA- 298
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 299 --YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 356
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 357 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|115495249|ref|NP_001069415.1| F-box/LRR-repeat protein 14 [Bos taurus]
gi|225543352|ref|NP_598701.2| F-box/LRR-repeat protein 14 [Mus musculus]
gi|404312677|ref|NP_001258205.1| F-box/LRR-repeat protein 14 [Rattus norvegicus]
gi|296211085|ref|XP_002752262.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 1 [Callithrix
jacchus]
gi|332249161|ref|XP_003273733.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 1 [Nomascus
leucogenys]
gi|348555895|ref|XP_003463758.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cavia porcellus]
gi|395845614|ref|XP_003795522.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 1 [Otolemur
garnettii]
gi|48428059|sp|Q8BID8.1|FXL14_MOUSE RecName: Full=F-box/LRR-repeat protein 14; AltName: Full=F-box and
leucine-rich repeat protein 14
gi|122144674|sp|Q17R01.1|FXL14_BOVIN RecName: Full=F-box/LRR-repeat protein 14; AltName: Full=F-box and
leucine-rich repeat protein 14
gi|26351129|dbj|BAC39201.1| unnamed protein product [Mus musculus]
gi|74196388|dbj|BAE33081.1| unnamed protein product [Mus musculus]
gi|109659305|gb|AAI18094.1| F-box and leucine-rich repeat protein 14 [Bos taurus]
gi|119609336|gb|EAW88930.1| F-box and leucine-rich repeat protein 14, isoform CRA_c [Homo
sapiens]
gi|148667199|gb|EDK99615.1| F-box and leucine-rich repeat protein 14 [Mus musculus]
gi|149049602|gb|EDM02056.1| rCG29594 [Rattus norvegicus]
gi|296487055|tpg|DAA29168.1| TPA: F-box/LRR-repeat protein 14 [Bos taurus]
Length = 400
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 148 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 205
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 206 QLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSL 258
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 259 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 298
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 299 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 358
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 359 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|47217481|emb|CAG10250.1| unnamed protein product [Tetraodon nigroviridis]
Length = 673
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 165/361 (45%), Gaps = 33/361 (9%)
Query: 33 SLERLPAHLADSLLRHLIRRRLIFPSLLEVF-KHNAEAIELRGENSVDAEWMAYLGAFRY 91
SL L L + LL H+ R RL+ P LE+F + L E + L AF
Sbjct: 270 SLAGLTPELVELLLNHMSRERLLRPRSLELFFGCPLQKFVLNCYPYCTNELLRQLRAFPA 329
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL--SISTLEKLWLSE 149
LR L++ V S + L + C LD + KVTDAGM L + S L +L L++
Sbjct: 330 LRHLSL-----VNSPLITGLKNL-CFLSLDQT---KVTDAGMVLYLHSAPSCLAQLSLNQ 380
Query: 150 TGLTADGIALLSSL-QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
T +T +A+L S L +L + V D+ +L L+ L L+L G+ VS G L
Sbjct: 381 TAVTEATLAVLPSCTPQLRLLSIKQTKVRDVA--ALARLSGLHTLNLDGTDVSESGLEHL 438
Query: 209 KMFPRLSFLNLAWTGVTKLPN-ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
P LS L+LA VT + + LNL+ T+ + S+ +
Sbjct: 439 ASHPLLSSLSLAGISVTDGNQALQIISGLNLTQLTLP------------GRRSVTDSGLA 486
Query: 268 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 327
+ L E L + V++ +++ L M+ L+ L LS++ + D + + +
Sbjct: 487 SVCRLTLLTELDLTDYTQVTDQGVAQ---LASMRRLKKLSLSNTQVTDAGLSPLRGL-QE 542
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY-MSMMPSLKFIDISNTD 386
L++L L T +S GV L LP+L++L L+ TQ+ D + + P L +++S T
Sbjct: 543 LQDLCLDRTAVTSRGVAALIACLPHLQVLGLACTQVGDTVVRRGLLRCPQLVKLNLSRTR 602
Query: 387 I 387
I
Sbjct: 603 I 603
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L L + R VT S L ++ +T L ELDL+ +VTD G+ L S+ L+KL LS T
Sbjct: 469 LTQLTLPGRRSVTDSGLASVCRLTLLTELDLTDYTQVTDQGVAQLASMRRLKKLSLSNTQ 528
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVSN----RGAA 206
+T G++ L LQ L L L VT + +L L L+ L L +QV + RG
Sbjct: 529 VTDAGLSPLRGLQELQDLCLDRTAVTSRGVAALIACLPHLQVLGLACTQVGDTVVRRG-- 586
Query: 207 VLKMFPRLSFLNLAWTGVT 225
L P+L LNL+ T +T
Sbjct: 587 -LLRCPQLVKLNLSRTRIT 604
>gi|5739323|gb|AAD50430.1|AF166121_1 Cf2/Cf5 disease resistance protein homolog [Hordeum vulgare subsp.
vulgare]
Length = 893
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 99 DCRRVTSSALWALTGMTC------LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL 152
DC R WA G+TC + LDLSR + LLS+ L+ L L T L
Sbjct: 67 DCCR------WA--GITCSNMTGRVIGLDLSRRFSLVGQISPSLLSLEHLQYLNLKSTSL 118
Query: 153 TADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
G L SL NL LDL + + ++ L L+KLEYLDL ++ + L
Sbjct: 119 CGHGGRIPEFLGSLNNLRHLDLSYMSFSGVLPPQLGNLSKLEYLDLSNMEMDVIDISWLS 178
Query: 210 MFPRLSFLNLAWTGVTKLPN-------ISSLECLNLSNCTIDSILEG--NENKAPLAKIS 260
PRL +L++++T ++ + I SL+ L LS C++ S + + N L +
Sbjct: 179 RLPRLMYLDISYTNLSSIAAWPPVVNMIPSLKDLRLSYCSLSSTNQSLTHLNLTNLQHLD 238
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
L+ F + + + + + +LD+S++SL
Sbjct: 239 LSRNYFAHPIASSWFWNVTSIEYLDLSDTSL 269
>gi|395845616|ref|XP_003795523.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 2 [Otolemur
garnettii]
Length = 401
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 148 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 205
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 206 QLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSL 258
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 259 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 298
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 299 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 358
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 359 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|290994554|ref|XP_002679897.1| leucine rich repeat domain protein [Naegleria gruberi]
gi|284093515|gb|EFC47153.1| leucine rich repeat domain protein [Naegleria gruberi]
Length = 331
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + + F+ L SL + D ++ + ++GMT L ELD+S + G
Sbjct: 116 GGNEIGLQGAKIVSEFKQLTSLYI-DSSQIGTEGAKLISGMTKLTELDISANYLCAE-GA 173
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L +S + + +GI +S ++NL+ LD+ G + +S+ + +L YL
Sbjct: 174 KSISGMDHLTFLNISSSNIDQEGIKSISEMKNLTKLDICGNNLGAEGAKSISQMKQLTYL 233
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT--------GVTKLPNISSL 233
+ + + + GA + +L+ LN+ + ++++PN++ L
Sbjct: 234 KAYTNSLRSEGAIFISELDKLTTLNICYNEIGDEGAKAISQMPNLTDL 281
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 111/236 (47%), Gaps = 25/236 (10%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE-----YLDLWGSQVSNRGAAVLKMF 211
+ L+ ++NL+ L +GG ++ L+ +++++ + Y+D SQ+ GA ++
Sbjct: 101 LELVGLMRNLTKLCVGG---NEIGLQGAKIVSEFKQLTSLYID--SSQIGTEGAKLISGM 155
Query: 212 PRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAP---LAKISLAG 263
+L+ L+++ G + + L LN+S+ ID EG ++ + L K+ + G
Sbjct: 156 TKLTELDISANYLCAEGAKSISGMDHLTFLNISSSNIDQ--EGIKSISEMKNLTKLDICG 213
Query: 264 TTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMV 321
E + + L++L +SL F++++ L L++ + IGD+ + +
Sbjct: 214 NNLGAEGAKSIS-QMKQLTYLKAYTNSLRSEGAIFISELDKLTTLNICYNEIGDEGAKAI 272
Query: 322 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 377
+ + NL +L + R G ++ + L +L +S +I + + Y+ M L
Sbjct: 273 SQM-PNLTDLRIDGNRIGPEGAKSIS-EMKQLRLLDISFNRIGEEGVKYVKGMKHL 326
>gi|332249163|ref|XP_003273734.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 2 [Nomascus
leucogenys]
gi|119609335|gb|EAW88929.1| F-box and leucine-rich repeat protein 14, isoform CRA_b [Homo
sapiens]
Length = 401
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 49/333 (14%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKL----WLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+L C +T+ G+ LL L++L S L+ GI L+ + + G L
Sbjct: 148 LELGGCSNITNTGL--LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLG 203
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLE 234
+ L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL
Sbjct: 204 LEQLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLR 256
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D V + SL+
Sbjct: 257 SLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA- 298
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 299 --YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 356
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 357 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|319881515|gb|ADV75084.1| TLR2B [Amazona albifrons]
Length = 397
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 279 SLLSFLDVSNSSLSRF-CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS 334
SLL+ + V N+ + C L+Q +++LE+LDLSS+++GD S+E AC GA +L+ LNLS
Sbjct: 97 SLLTKVTVENTKVFLVPCSLSQHLRSLEYLDLSSNLLGDQSLEHSACQGAWPSLQTLNLS 156
Query: 335 NTRFSSAGV-GILAGHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQ 392
S + G HL NL +L +S + I + P +LK++++S+T I
Sbjct: 157 QNSLSDLEMTGKSLSHLRNLSLLDISQNNFGE--IPDVCEWPKNLKYLNVSSTHIPKLTT 214
Query: 393 QVGAETDLVLSLTA-------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
+ + VL ++A LQ L L+ L L + Q+ TL + L+ +S+R
Sbjct: 215 CIPPTLE-VLDVSANNLKEFGLQ-LPFLKELYLTKNQLK--TLPGAAPIPNLVAMSVRRN 270
Query: 446 SLTDVSLHQLSSLSKLTNLSIRD 468
L S + S K+ L D
Sbjct: 271 KLNSFSREEFESFKKMELLDASD 293
>gi|440712554|ref|ZP_20893170.1| hypothetical protein RBSWK_00227 [Rhodopirellula baltica SWK14]
gi|436442709|gb|ELP35820.1| hypothetical protein RBSWK_00227 [Rhodopirellula baltica SWK14]
Length = 341
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKID 249
Query: 245 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L+ E K L +++ I E + + L L + +S+S L Q+K L
Sbjct: 250 NESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA-LPQLKPL 308
Query: 304 EHLD 307
+ L+
Sbjct: 309 QELE 312
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
S G + LPNL+ L + G DD +S +P+L + +T + V AE
Sbjct: 106 SDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAE-- 163
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 ----------LNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
++ + AL + + + DD ++A + L++++L N+ + + ++ LP L L
Sbjct: 137 ISGLPALVAVTFQDTSVTDDGASVLAELN-ELQDVSLMNSPVTDKTLASIS-TLPKLTKL 194
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LESLELAETDF-------GPE-----GMPAIANIEGLEKI 241
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
NL T++ + +L L L++ N ++T+ ++ + SL L L + ++
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA 301
Query: 476 LGSFKPPRSLKLL 488
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|410963525|ref|XP_003988315.1| PREDICTED: F-box/LRR-repeat protein 14, partial [Felis catus]
Length = 411
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 49/333 (14%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 82 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 138
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKL----WLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+L C +T+ G+ LL L++L S L+ GI L+ + + G L
Sbjct: 139 LELGGCSNITNTGL--LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLG 194
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLE 234
+ L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL
Sbjct: 195 LEQLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLR 247
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D V + SL+
Sbjct: 248 SLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA- 289
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 290 --YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 347
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 348 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 380
>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
Length = 1279
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 177/386 (45%), Gaps = 69/386 (17%)
Query: 139 ISTLEKLWLSETGLT--ADGIALLSSLQNLSVLD--LGGLPVTDLVLRSLQVLTKLEYLD 194
+S+L+ L +S T L D I LSSLQ+L V D + LP S+ L+ L++LD
Sbjct: 265 LSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLP------DSIGQLSNLQHLD 318
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN----ISSLECLNLSNCTIDSILEGN 250
+ + ++ ++ ++ L L ++ + LP +SSL+ LNLS + ++ E
Sbjct: 319 VSDTSLNTLPDSIGQL-SNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEAL 377
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLS 309
+ L ++L+GT EA + + L L++S + L+ + Q+ +L+ L+LS
Sbjct: 378 CQLSSLQDLNLSGTGLTTLPEAICQLNS--LQDLNLSGTGLTTLPEAICQLNSLQDLNLS 435
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSS----------------AGVGILA-----G 348
+ G ++ C +L++LNLS T ++ +G G+ G
Sbjct: 436 GT--GLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIG 493
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG----------AET 398
L NL L S T + + + +L+F++ISNT + +G ++T
Sbjct: 494 QLTNLNNLMASNTALTTLP-DTLGQLSNLEFLNISNTSLVTLPDSIGLLSHLQILFVSDT 552
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-----SLH 453
DLV ++ L LE LN+ T + T P + L +L + N S TD+ S+
Sbjct: 553 DLVTLPESIGQLTSLEILNVSNTGL---TSLP-ESIGRLTNLQILNVSNTDLTSLPESIG 608
Query: 454 QLSSLSKLTNLSIRDAVLTNSGLGSF 479
QL SL KL ++N+GL S
Sbjct: 609 QLKSLIKLN--------VSNTGLTSL 626
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 185/380 (48%), Gaps = 69/380 (18%)
Query: 142 LEKLWLSETGLTA--DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
L+ L++S T LT + I LS+L+ L + G + + D S+ + L+ L++ +
Sbjct: 107 LQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPD----SIGEMPNLQDLNVSSTD 162
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
++ A++ ++ RL L+++ TG+T LP+ S+ L++ L +
Sbjct: 163 LTTLPASIGQLT-RLQHLDVSSTGLTSLPD--SIGQLSM-----------------LKHL 202
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMIG--DD 316
++GT ++ + L LDVS++SL+ + Q+ +L+HLD+S + + D
Sbjct: 203 DVSGTDLATLPDSIGQLTN--LKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPD 260
Query: 317 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 376
S+ + ++L++L++S TR I+ L +L+ L +S T I++ S + + +
Sbjct: 261 SIGQL----SSLQHLDVSGTRLQILPDSIV--QLSSLQHLDVSDTSINNLPDS-IGQLSN 313
Query: 377 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
L+ +D+S+T + +G L NL HLE VSDA+ L+T E
Sbjct: 314 LQHLDVSDTSLNTLPDSIG----------QLSNLQHLE--------VSDAS---LNTLPE 352
Query: 437 LIHL--SLRNASLTDVSLHQL-SSLSKLTNLSIRDAVLTNSGLGSFKPP----RSLKLLD 489
I SL++ +L+ L L +L +L+ S++D L+ +GL + SL+ L+
Sbjct: 353 TIWRLSSLQDLNLSGTGLTTLPEALCQLS--SLQDLNLSGTGLTTLPEAICQLNSLQDLN 410
Query: 490 LHGGWLLT-EDAILQFCKMH 508
L G L T +AI Q +
Sbjct: 411 LSGTGLTTLPEAICQLNSLQ 430
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 52/276 (18%)
Query: 213 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT------F 266
LSFL L LP +++L+ L +++ I + + E L ++++GT+ F
Sbjct: 47 ELSFLPL------DLPPLTNLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEF 100
Query: 267 INEREAF--LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
I E LY+ + L+ L S + Q+ L LD+S S + + +
Sbjct: 101 IGELVGLQSLYVSRTALTTLPNS---------IRQLSNLRRLDISFSGF----INLPDSI 147
Query: 325 G--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY--AISYMSMMPSLKFI 380
G NL++LN+S+T ++ I G L L+ L +S T + +I +SM LK +
Sbjct: 148 GEMPNLQDLNVSSTDLTTLPASI--GQLTRLQHLDVSSTGLTSLPDSIGQLSM---LKHL 202
Query: 381 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
D+S TD+ +G L NL HL+ + + D+ + L HL
Sbjct: 203 DVSGTDLATLPDSIG----------QLTNLKHLDVSSTSLNTLPDS----IGQLSSLQHL 248
Query: 441 SLRNASLTDV--SLHQLSSLSKLTNLSIRDAVLTNS 474
+ SL + S+ QLSSL L R +L +S
Sbjct: 249 DVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDS 284
>gi|255536164|ref|YP_003096535.1| Two component regulator three Y domain protein [Flavobacteriaceae
bacterium 3519-10]
gi|255342360|gb|ACU08473.1| Two component regulator three Y domain protein [Flavobacteriaceae
bacterium 3519-10]
Length = 542
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 18/268 (6%)
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ + S L+KL LS LT + +SSL +L LD+ +T + +L LE L
Sbjct: 81 YFSTFSKLKKLDLSSNQLTGEISNSVSSLTDLVRLDISNNRLTGDPAAATAMLINLEELS 140
Query: 195 LWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPN----ISSLECLNLSNCTIDSILEG 249
L +Q V N + L+ FP L L+LA T + +P L+ LNLSN T+
Sbjct: 141 LGNNQFVFNDVESFLQNFPNLRILDLAHTQLLAVPQKISGFPKLQSLNLSNNTLSQNFSA 200
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSF--LDVSNSSLS--RFCFLTQMKALEH 305
L +++L+GT I + +E S L LDVSN++ + L+ M LE
Sbjct: 201 LSTLLQLTELNLSGTQLIK-----IPVELSGLPLVTLDVSNNAFAPNYSMVLSNMSELEW 255
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L L ++ + E+ L +LNLS + + G A L NLE L L+ QI+
Sbjct: 256 LSLENNQLTALPRELAQL--KKLVHLNLSGNKITGGFDGFSA--LKNLEQLYLNHNQIEG 311
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQ 393
+ + + L+ + ++ + G I +
Sbjct: 312 NFPAALLQLDKLQMLSLTGNQLTGEIPE 339
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 41/212 (19%)
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
L LD+S++ + D A + NL L+L N +F V + PNL IL L+ TQ
Sbjct: 112 LVRLDISNNRLTGDPAAATAML-INLEELSLGNNQFVFNDVESFLQNFPNLRILDLAHTQ 170
Query: 363 IDDYAI-SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+ A+ +S P L+ +++SN L + +AL L L LNL T
Sbjct: 171 L--LAVPQKISGFPKLQSLNLSN-------------NTLSQNFSALSTLLQLTELNLSGT 215
Query: 422 Q-----------------VSDATLFP-----LSTFKELIHLSLRNASLTDVSLHQLSSLS 459
Q VS+ P LS EL LSL N LT + +L+ L
Sbjct: 216 QLIKIPVELSGLPLVTLDVSNNAFAPNYSMVLSNMSELEWLSLENNQLTALP-RELAQLK 274
Query: 460 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
KL +L++ +T G F ++L+ L L+
Sbjct: 275 KLVHLNLSGNKIT-GGFDGFSALKNLEQLYLN 305
>gi|126340111|ref|XP_001366661.1| PREDICTED: f-box/LRR-repeat protein 14-like [Monodelphis domestica]
Length = 400
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 148 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 205
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 206 QLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSL 258
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 259 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 298
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 299 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 358
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 359 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|54294508|ref|YP_126923.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
gi|53754340|emb|CAH15819.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
Length = 464
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 148/356 (41%), Gaps = 43/356 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
++SLN+ + + AL L L+L R + D G K L + +L L LS
Sbjct: 46 IKSLNLRN-NNIGDEGAKALAANQSLSTLNL-RANNIGDEGAKALAANQSLSTLNLSYNN 103
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+ A+G L++ Q+LS L+L + D ++L L L+L + + + GA L
Sbjct: 104 IGAEGAKALAANQSLSTLNLRANNIGDEGAKALAANQSLSTLNLRYNNIGDEGAKALAAN 163
Query: 212 PRLSFLNL-----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
LS LNL G L SL LNLS I + EG KA A SL +
Sbjct: 164 QSLSTLNLRNNNIGDEGAKALAANQSLSTLNLSYNNIRA--EG--AKALAANQSL---ST 216
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
+N R + E + L ++L L+LS + IGD+ + +A +
Sbjct: 217 LNLRYNNIRAEGA---------------KALAANQSLSTLNLSYNNIGDEGAKALAANQS 261
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
L LNLS G LA + L L+LS I D ++ SL +++S +
Sbjct: 262 -LSTLNLSYNNIGDEGAKALAANQS-LSTLNLSYNNIGDEGAKALAANQSLSTLNLSYNN 319
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
I+ GA+ +L A Q L LNL + D L+ + L L+L
Sbjct: 320 IRA----EGAK-----ALAANQ---SLSTLNLSYNNIGDEGAKALAANQSLSTLNL 363
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E L A + L +LN++ + AL L L+LS + D G K
Sbjct: 246 NNIGDEGAKALAANQSLSTLNLS-YNNIGDEGAKALAANQSLSTLNLSYN-NIGDEGAKA 303
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L + +L L LS + A+G L++ Q+LS L+L + D ++L L L+L
Sbjct: 304 LAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAANQSLSTLNL 363
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
+ + GA L LS LNL++ +
Sbjct: 364 SYNNIRAEGAKALAANQSLSTLNLSYNNI 392
>gi|187779624|ref|ZP_02996097.1| hypothetical protein CLOSPO_03220 [Clostridium sporogenes ATCC
15579]
gi|187773249|gb|EDU37051.1| leucine Rich Repeat protein [Clostridium sporogenes ATCC 15579]
Length = 1360
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 192/426 (45%), Gaps = 62/426 (14%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+ + +KELDL +++++S LEKL LS T + I+LL+ L NL +++
Sbjct: 353 SDLENIKELDLHNTHVERLNAIENMIS---LEKLNLSGTDIQD--ISLLNELTNLKEVNI 407
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
+ ++ R+L+ ++YL++ ++V+N +K + L ++ T V+ +P++
Sbjct: 408 SDTNINNI--RALENSPYIKYLNINKTEVAN--LEYIKNMKHIEKLYVSDTKVSTIPDLV 463
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAK--------ISLAGTTFINEREAFLYIETSLLSF 283
SL+ LN+SNC + +I E + L+K + + G N + Y++ L +
Sbjct: 464 SLKELNISNCNVTNI----EFISSLSKLTYLCLSNVQIKGHILDN-IDNIKYLKN--LEY 516
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVA--CVGA 326
L ++ + + + ++ L+ LD++ +IG+++V M A +
Sbjct: 517 LSIAGTDVVNIDVVKELINLKKLDITGCTKINTEILSHLSNVEIIGNETV-MFADKALEK 575
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
+R L + I L ++ L LSG I D SM +L ++D+SN +
Sbjct: 576 EIREL------IKNYSEPIYKRQLSSITKLELSGKGIKDLQ-GLESMKDTLTYLDLSNNE 628
Query: 387 I------KGFI--QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
I KG I ++ + + S+ ++ L L+ L+L + D T L +L
Sbjct: 629 ISDISSLKGLINLNKLVLHKNKIGSIKPIEYLKSLKELDLSNNIIGDIT--ALGGLSQLT 686
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
L L + VS+ LS L L LS+ + ++ G S K SLK L L +
Sbjct: 687 RLDLSKNGV--VSIANLSGLENLQYLSLYENKIS-EGEESLKKLYSLKELYLKNSGVSNF 743
Query: 499 DAILQF 504
D L +
Sbjct: 744 DVTLSY 749
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 183/445 (41%), Gaps = 91/445 (20%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS----------IST 141
L+ L++ C ++ + L L+ + + + K + ++ L+ +S+
Sbjct: 536 LKKLDITGCTKINTEILSHLSNVEIIGNETVMFADKALEKEIRELIKNYSEPIYKRQLSS 595
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV--------------------L 181
+ KL LS G+ D L S L+ LDL ++D+ +
Sbjct: 596 ITKLELSGKGI-KDLQGLESMKDTLTYLDLSNNEISDISSLKGLINLNKLVLHKNKIGSI 654
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 241
+ ++ L L+ LDL + + + A L +L+ L+L+ GV + N+S LE L +
Sbjct: 655 KPIEYLKSLKELDLSNNIIGDITA--LGGLSQLTRLDLSKNGVVSIANLSGLENLQYLSL 712
Query: 242 TIDSILEGNEN-------------KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
+ I EG E+ + ++ + + + N + + + F + S
Sbjct: 713 YENKISEGEESLKKLYSLKELYLKNSGVSNFDVTLSYYNNLEKKDFTTHSDFIVFDEKSE 772
Query: 289 SSLSRF------------CFLTQMKALEHLDLSSSMIGDDSVEM-VACVGANLRNLN--- 332
S L++ F ++ + LDLS I D ++ + G N+ +L
Sbjct: 773 SDLAKITREILGRDKNTNVFKGDVENITDLDLSKERIEKDGLKAKLQLTGDNIVDLEGIQ 832
Query: 333 -LSN-TRFSSAGVGILAG-----HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
SN T + G GIL G + L L L+G ++D ++ Y+ + SL+++ ++NT
Sbjct: 833 YFSNLTSINLKGEGILKGIKNLMPIKTLVKLDLAGREVD--SLDYIKYLKSLEYLYLNNT 890
Query: 386 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
+ G L L++L +L+ L+L +SD ++ L KEL L L
Sbjct: 891 KLSG-------------GLLFLEDLTNLKALDLSDNNISDISI--LKGLKELNKLYLGKN 935
Query: 446 SLTDVSLHQLSSLSKLTNLSIRDAV 470
+ D LSSL LT L D V
Sbjct: 936 KIID-----LSSLEGLTKLVTLDLV 955
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 328 LRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
++ LNL N S L G +L N+ L +S I D ISY+ + SL+ +++ N
Sbjct: 162 IKELNLHNKNIKS-----LKGIEYLKNISNLDISDNHITD--ISYLRGLDSLEKLNLYNN 214
Query: 386 DIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 437
DIK ++ + + V+ ++ L+NLN+LE L+L ++ + + L L
Sbjct: 215 DIKDISAVSNLPKLKYLNMAKNEVIDISYLKNLNYLEHLDLRDNKIEN--IDSLEGKISL 272
Query: 438 IHLSLRNASLTDVS 451
I+L + N ++ D S
Sbjct: 273 IYLFMSNNNIGDFS 286
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 166/400 (41%), Gaps = 99/400 (24%)
Query: 190 LEYLDLWGSQVSN---------RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
L Y+D+ G + N +G LK L + T ++ L + SLE LNL N
Sbjct: 154 LTYMDVSGIKELNLHNKNIKSLKGIEYLKNISNLDISDNHITDISYLRGLDSLEKLNLYN 213
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSNSSLSRFCFLTQ 299
I I N L +++A I+ Y++ + L LD+ ++ + L
Sbjct: 214 NDIKDI-SAVSNLPKLKYLNMAKNEVID----ISYLKNLNYLEHLDLRDNKIENIDSLEG 268
Query: 300 MKALEHLDLSSSMIGDDS-------VEMVACVGANLRNLNLSNTRFSS------------ 340
+L +L +S++ IGD S ++ + VG + N + + +++
Sbjct: 269 KISLIYLFMSNNNIGDFSPISKLKYLKSLYLVGNHSSNYDYAKDYYNNLKDKDFKLNIPI 328
Query: 341 ------------------AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
+G + L N++ L L T ++ ++ + M SL+ +++
Sbjct: 329 AFKDKIFEELIRKEINKPSGY-VYPSDLENIKELDLHNTHVE--RLNAIENMISLEKLNL 385
Query: 383 SNTDIKG------------------------------FIQQVGAETDLVLSLTALQNLNH 412
S TDI+ +I+ + V +L ++N+ H
Sbjct: 386 SGTDIQDISLLNELTNLKEVNISDTNINNIRALENSPYIKYLNINKTEVANLEYIKNMKH 445
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT-----NLSIR 467
+E+L + T+VS T+ L + KE L++ N ++T++ +SSLSKLT N+ I+
Sbjct: 446 IEKLYVSDTKVS--TIPDLVSLKE---LNISNCNVTNIEF--ISSLSKLTYLCLSNVQIK 498
Query: 468 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
+L N + + K ++L+ L + G ++ D + + +
Sbjct: 499 GHILDN--IDNIKYLKNLEYLSIAGTDVVNIDVVKELINL 536
>gi|153939809|ref|YP_001392382.1| internalin [Clostridium botulinum F str. Langeland]
gi|384463356|ref|YP_005675951.1| putative internalin [Clostridium botulinum F str. 230613]
gi|152935705|gb|ABS41203.1| putative internalin [Clostridium botulinum F str. Langeland]
gi|295320373|gb|ADG00751.1| putative internalin [Clostridium botulinum F str. 230613]
Length = 364
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 44/271 (16%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT---A 154
++ +V A+ G L+++ + + ++ G+++L I L L L E LT
Sbjct: 58 SNLEKVIRLAIRKPIGKLRLRDVVDIKKLDASNKGIQNLDGIENL--LRLQELDLTDNEI 115
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
D I+ LSSL+++S+L LG +TD+ SL+ +KL+ L L+ ++V + LK F ++
Sbjct: 116 DDISALSSLKDISILKLGKNKITDIA--SLKNCSKLKELYLFDNKVID--ITPLKNFEKI 171
Query: 215 SFLNLAWTGVTK---LPNISSLECLNL-SNCTID--SILEGNENKAPLAKISLAGTTF-- 266
L+L V LP + +L+ + L +N ID IL + L ++LAG F
Sbjct: 172 YILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFKPILRMQQ----LTTVNLAGNNFTD 227
Query: 267 ---INEREAF--LYI------------ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
IN+ ++ LYI S L LDVSN+ ++ ++ + +E L++S
Sbjct: 228 MQDINQLKSLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNIS 287
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
S+ I D + N +NL+ + R+++
Sbjct: 288 SNYIRD------IKILENFKNLSKVDLRYNN 312
>gi|421610748|ref|ZP_16051914.1| leucine-rich repeat domain protein [Rhodopirellula baltica SH28]
gi|408498532|gb|EKK03025.1| leucine-rich repeat domain protein [Rhodopirellula baltica SH28]
Length = 341
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKID 249
Query: 245 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L+ E K L +++ I E + + L L + +S+S L Q+K L
Sbjct: 250 NESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA-LPQLKPL 308
Query: 304 EHLD 307
+ L+
Sbjct: 309 QELE 312
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
S G + LPNL+ L + G DD +S +P+L + +T + V AE
Sbjct: 106 SDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAE-- 163
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 ----------LNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
++ + AL + + + DD ++A + L++++L N+ + + ++ LP L L
Sbjct: 137 ISGLPALVAVTFQDTSVTDDGASVLAELN-ELQDVSLMNSPVTDKTLASIS-TLPKLTKL 194
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LESLELAETDF-------GPE-----GMPAIANIEGLEKI 241
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
NL T++ + +L L L++ N ++T+ ++ + SL L L + ++
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA 301
Query: 476 LGSFKPPRSLKLL 488
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|281349609|gb|EFB25193.1| hypothetical protein PANDA_001999 [Ailuropoda melanoleuca]
Length = 398
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 148 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 205
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 206 QLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSL 258
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 259 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 298
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 299 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 358
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 359 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|385800049|ref|YP_005836453.1| hypothetical protein [Halanaerobium praevalens DSM 2228]
gi|309389413|gb|ADO77293.1| conserved repeat domain protein [Halanaerobium praevalens DSM 2228]
Length = 2607
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
S L G E+ L K++L G I++ + L+ L ++ + ++ +L + L
Sbjct: 1084 SDLSGLEHFTSLDKLALYGGKKISDLSPLQNLTN--LNSLTLTENVINNIDYLANLTNLT 1141
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNL----SNTRFSSAGVGILAGHLPNLEILSLSG 360
LDLSS+ I D SV ANL L SN + + +L +L LE LSL
Sbjct: 1142 RLDLSSNKISDISVL------ANLTKLTELVLGSNIITDESDLSVLE-NLTELEHLSLEE 1194
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
+I + I +S + L ++ + +T+++ +++L+NL L LNL
Sbjct: 1195 NEISN--IDSLSNLSKLNYLHLGSTNVE--------------DISSLKNLTALNFLNLNS 1238
Query: 421 TQVSDATLFPLSTFKELIHLSLR--NASLTDVSLHQLSSLSKLTNL 464
T ++D L LS FK L L L+ N ++D+S+ ++ LTNL
Sbjct: 1239 TYINDEDLTILSNFKSLTELYLQSSNDKISDISV-----VADLTNL 1279
Score = 46.6 bits (109), Expect = 0.039, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S L L +T L L L+ V + +L +++ L +L LS ++ I++L++L
Sbjct: 1107 SDLSPLQNLTNLNSLTLTENVI---NNIDYLANLTNLTRLDLSSNKIS--DISVLANLTK 1161
Query: 166 LSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
L+ L LG +TD L L+ LT+LE+L L +++SN + L +L++L+L T V
Sbjct: 1162 LTELVLGSNIITDESDLSVLENLTELEHLSLEENEISNIDS--LSNLSKLNYLHLGSTNV 1219
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS-- 282
+ ++ +L LN N +T+IN+ + + L+
Sbjct: 1220 EDISSLKNLTALNFLNLN---------------------STYINDEDLTILSNFKSLTEL 1258
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
+L SN +S + + L++L L + I D
Sbjct: 1259 YLQSSNDKISDISVVADLTNLKYLYLGYNEISD 1291
>gi|290997297|ref|XP_002681218.1| leucine-rich repeat ribonuclease inhibitor family protein
[Naegleria gruberi]
gi|284094841|gb|EFC48474.1| leucine-rich repeat ribonuclease inhibitor family protein
[Naegleria gruberi]
Length = 342
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 112/238 (47%), Gaps = 31/238 (13%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+T M L L++ R ++ D G K++ + L L + E + +G +S ++ L+ LD
Sbjct: 124 VTEMKQLTSLNI-RGNRIGDEGAKYISEMKQLTSLNIRENEIGDEGAKFISEMKQLTSLD 182
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVT 225
+ G + D + + + +L L+++ + + GA + +L+ LN+ + G
Sbjct: 183 IRGNRIGDEGAKYISEMKQLTSLNIYYTLIGIEGAKFISEMKQLTLLNIYYNLIGIEGAK 242
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL-LSFL 284
+ + L L++SN NE I + G FI+E + TSL +++
Sbjct: 243 FISEMKQLTLLDISN---------NE-------IGIEGAKFISEMKQL----TSLNINYN 282
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
++ + F+++MK L L++S ++ GD + ++ + L +L++SN R G
Sbjct: 283 EIGDRGAK---FISEMKQLTSLNISYNITGDRGAKFISEM-KQLTSLDISNNRICDEG 336
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F+++MK L LD+ + IGD+ + ++ + L +LN+ T G ++ + L +
Sbjct: 171 FISEMKQLTSLDIRGNRIGDEGAKYISEM-KQLTSLNIYYTLIGIEGAKFIS-EMKQLTL 228
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L++ I ++S M L +DISN +I G E +S + L
Sbjct: 229 LNIYYNLIGIEGAKFISEMKQLTLLDISNNEI-------GIEGAKFIS-----EMKQLTS 276
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LN+ ++ D +S K+L L++ D +S + +LT+L I + + + G
Sbjct: 277 LNINYNEIGDRGAKFISEMKQLTSLNISYNITGDRGAKFISEMKQLTSLDISNNRICDEG 336
>gi|290996013|ref|XP_002680577.1| predicted protein [Naegleria gruberi]
gi|284094198|gb|EFC47833.1| predicted protein [Naegleria gruberi]
Length = 395
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 44/328 (13%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+G F+ L LN++D + A+ + L ELD+ C ++ + G K + + L L
Sbjct: 49 IGKFKQLTILNISD--NPIMKGVEAIGLLKQLTELDVRYC-RMGEEGSKIISKLGQLTNL 105
Query: 146 WLSETGLTADGIALL------------------------SSLQNLSVLDLGGLPVTDLVL 181
+S + + G + L+ L+ LD+ G + D
Sbjct: 106 DISHNSIRSKGFKFICEMKQLIILKVQYNKLEKSSSNQIEDLKQLTKLDISGNNIDDEGA 165
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECL 236
+S+ L +L LD+ + +SN G L +L +LN+++ V + + N+ L L
Sbjct: 166 KSIGQLKQLTKLDISVNYLSNVGVKHLSDLQQLIYLNVSYNDVDEEVAKDIYNMKKLSKL 225
Query: 237 NL--SNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYI-ETSLLSFLDVSNSSLS 292
N+ ++ I+S + G + + + G + F +I + L+ LD+S + ++
Sbjct: 226 NIGGNDLNIESFSMIGKMDHLKKLEFGVVGLG----NDGFEFISKLKHLTMLDISENQIN 281
Query: 293 RFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 350
L++M+ L LD+ + IGD + ++ + L +LN N F + G ++ +
Sbjct: 282 DNGAELLSRMEHLTKLDVGFNSIGDRGIRSISML-KKLTDLNARNNEFGNEGAKYIS-EM 339
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLK 378
L IL + + D I ++ M +LK
Sbjct: 340 MQLTILQVDENKFGDEGIIAITKMKNLK 367
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N VD E + + L LN+ + + + M LK+L+ V + + G +
Sbjct: 206 NDVDEEVAKDIYNMKKLSKLNIG-GNDLNIESFSMIGKMDHLKKLEFG-VVGLGNDGFEF 263
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L +SE + +G LLS +++L+ LD+G + D +RS+ +L KL L+
Sbjct: 264 ISKLKHLTMLDISENQINDNGAELLSRMEHLTKLDVGFNSIGDRGIRSISMLKKLTDLNA 323
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNL--------AWTGVTKLPNISSL 233
++ N GA + +L+ L + +TK+ N+ L
Sbjct: 324 RNNEFGNEGAKYISEMMQLTILQVDENKFGDEGIIAITKMKNLKKL 369
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 42/306 (13%)
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF--I 267
+ P+L+ L L+ + I + L + N + + I++G E L +++ + +
Sbjct: 29 LMPKLTELKLSKHTFNDIEPIGKFKQLTILNISDNPIMKGVEAIGLLKQLTELDVRYCRM 88
Query: 268 NEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKAL---------------------- 303
E + + + L+ LD+S++S+ F F+ +MK L
Sbjct: 89 GEEGSKIISKLGQLTNLDISHNSIRSKGFKFICEMKQLIILKVQYNKLEKSSSNQIEDLK 148
Query: 304 --EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
LD+S + I D+ + + + L L++S S+ GV L+ L L L++S
Sbjct: 149 QLTKLDISGNNIDDEGAKSIGQL-KQLTKLDISVNYLSNVGVKHLS-DLQQLIYLNVSYN 206
Query: 362 QIDDYAISYMSMMPSLKFIDISNTD--IKGF--IQQVGAETDLVLSLTALQN-------- 409
+D+ + M L ++I D I+ F I ++ L + L N
Sbjct: 207 DVDEEVAKDIYNMKKLSKLNIGGNDLNIESFSMIGKMDHLKKLEFGVVGLGNDGFEFISK 266
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
L HL L++ + Q++D LS + L L + S+ D + +S L KLT+L+ R+
Sbjct: 267 LKHLTMLDISENQINDNGAELLSRMEHLTKLDVGFNSIGDRGIRSISMLKKLTDLNARNN 326
Query: 470 VLTNSG 475
N G
Sbjct: 327 EFGNEG 332
>gi|318053999|ref|NP_001188265.1| Fbxl16 protein-like [Danio rerio]
Length = 493
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 20/151 (13%)
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSAL-WALTGMTCLKELDL 122
K + +EL EN R LRSL+++ C R+T AL + + L+EL L
Sbjct: 346 KITDDGVELVAEN------------LRKLRSLDLSWCPRITDMALEYIACDLHKLEELVL 393
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLV 180
RCV++TD G+ +L ++STL L+L D G+ L +++L +L L G P +T
Sbjct: 394 DRCVRITDTGLGYLSTMSTLRSLYLRWCCQVQDFGLQHLYGMRSLRLLSLAGCPLLTTTG 453
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
L L L LE L+L +N A ++F
Sbjct: 454 LSGLIQLQDLEELEL-----TNCPGATAELF 479
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVE--MVACVGANLRNLNLSNT-RFSSAGVGILAGHLPN 352
L QM+ L HL+LS +D E + + + A L +L++S+ + + ++ LPN
Sbjct: 227 MLEQMQGLMHLELSGC---NDFTEAGLWSSLNARLTSLSVSDCINVADDAIAAISQLLPN 283
Query: 353 LEILSLSGTQIDDYAISYMSMMPSL--------KFIDISNTDIKGFIQQVGAETDLVLS- 403
L LSL + D A++Y + +I+N + + + T L LS
Sbjct: 284 LSELSLQAYHVTDTAMAYFTAKQGYTTHTLRLNSCWEITNHGVVNMVHSLPNLTSLSLSG 343
Query: 404 ----------LTALQNLNHLERLNLEQ-TQVSDATL-FPLSTFKELIHLSL-RNASLTDV 450
L A +NL L L+L +++D L + +L L L R +TD
Sbjct: 344 CSKITDDGVELVA-ENLRKLRSLDLSWCPRITDMALEYIACDLHKLEELVLDRCVRITDT 402
Query: 451 SLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
L LS++S L +L +R + + GL RSL+LL L G LLT +
Sbjct: 403 GLGYLSTMSTLRSLYLRWCCQVQDFGLQHLYGMRSLRLLSLAGCPLLTTTGL 454
>gi|403286756|ref|XP_003934642.1| PREDICTED: F-box/LRR-repeat protein 14, partial [Saimiri
boliviensis boliviensis]
Length = 349
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 39 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 95
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 96 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLSLE 153
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 154 QLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSL 206
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 207 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 246
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 247 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 306
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 307 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 337
>gi|158299381|ref|XP_319486.4| AGAP010289-PA [Anopheles gambiae str. PEST]
gi|157014337|gb|EAA14603.5| AGAP010289-PA [Anopheles gambiae str. PEST]
Length = 381
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 58 SLLEVFKH--NAEAIELRGENSVDAEWMAYLGA--FRYLRSLNVADCRRVTSSALWALT- 112
SL + +H N E +EL G +++ ++ A L L + DC+R++ AL +
Sbjct: 177 SLGRITQHLKNIEVLELGGCSNITNTGLSKETADGTPALEYLGLQDCQRLSDEALRHIAQ 236
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQN-LSVLD 170
G+T L+ ++LS CV VTD+G+KHL +S LE+L L +D G+A L+ N +S LD
Sbjct: 237 GLTSLRSINLSFCVSVTDSGLKHLARMSRLEELNLRACDNISDIGMAYLTEGCNSISTLD 296
Query: 171 LGGL-PVTDLVLRSL-QVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLA 220
+ V D + + Q L +L L L Q+++ G + + K L LN+
Sbjct: 297 VSFCDKVADQAMVHISQGLFQLRSLSLSACQITDEGLSRIAKSLHDLETLNIG 349
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 132/320 (41%), Gaps = 84/320 (26%)
Query: 57 PSLL-EVFKHNAEAIELRGENSVD-AEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-G 113
P+L + K + +++ N D A A+ F L+ LN++ C++VT S+L +T
Sbjct: 125 PTLFGSLVKRGIKRVQVGCYNITDMAIGHAFAADFPNLKVLNLSLCKQVTDSSLGRITQH 184
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
+ ++ L+L C +T+ G+ + TADG +L+ L + D
Sbjct: 185 LKNIEVLELGGCSNITNTGL----------------SKETADGTP---ALEYLGLQDCQR 225
Query: 174 LPVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF-LNLAWTGVTKLPNIS 231
L +D LR + Q LT L ++ LSF +++ +G+ L +S
Sbjct: 226 L--SDEALRHIAQGLTSLRSIN-------------------LSFCVSVTDSGLKHLARMS 264
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
LE LNL C IS G ++ E + +S LDVS
Sbjct: 265 RLEELNLRACD---------------NISDIGMAYLTE-------GCNSISTLDVS---- 298
Query: 292 SRFCFLTQMKALEH----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSS 340
FC +A+ H L LS+ I D+ + +A +L LN+ +R +
Sbjct: 299 --FCDKVADQAMVHISQGLFQLRSLSLSACQITDEGLSRIAKSLHDLETLNIGQCSRITD 356
Query: 341 AGVGILAGHLPNLEILSLSG 360
G+ I+A L NL + L G
Sbjct: 357 RGLEIVAAELINLRAIDLYG 376
>gi|290991127|ref|XP_002678187.1| predicted protein [Naegleria gruberi]
gi|284091798|gb|EFC45443.1| predicted protein [Naegleria gruberi]
Length = 265
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 109/232 (46%), Gaps = 8/232 (3%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+++++R + + +Y+G + L SLN++DC + + + + + L EL + C
Sbjct: 17 KSLKIRSKFIFGEDLRSYIGELKQLNSLNISDCINIGNRGVNVIRELDKLTELHIDNCC- 75
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+ + G K + ++ L L ++ GL G+A + L++++ L + ++D + + +
Sbjct: 76 IGEKGAKKIGAMQQLRTLSINGCGLGKKGVASVCKLKDMTKLGIRKNHISDSLALEISQM 135
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLS-----FLNLAWTGVTKLPNISSLECLNLSNCT 242
TKL LD + + GA + L F ++ GV + + L LN+S
Sbjct: 136 TKLTELDAGVNDIGPEGAKSISQMTNLKTLLLDFNDIGKEGVKYISGMKQLISLNISEND 195
Query: 243 I-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
I D ++ L +S+ + +E ++ E S L+ LD+S + L++
Sbjct: 196 IRDKGVKSISEMKNLTCLSVRSNSIGDEGAKYIS-EMSNLTQLDISCNVLTQ 246
>gi|334117579|ref|ZP_08491670.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460688|gb|EGK89296.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
Length = 516
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 163/354 (46%), Gaps = 52/354 (14%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+S+L +L+LS G I L+SL NL+VLDLG + D ++ L LT L L+L+G+
Sbjct: 86 LSSLTELFLS--GNVIGDITPLASLTNLTVLDLGFNALGD--IKPLASLTNLTRLNLFGN 141
Query: 199 QVSN-RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
Q+ + + A L L+ N + L ++++L L LS+ + I PLA
Sbjct: 142 QIGDIKPLASLTKLTELTLNNNKIGDIKPLASLTNLTDLVLSSNQVGDI-------KPLA 194
Query: 258 ------KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
++ L G I + + + L+ LD+ + + L + L LDL +
Sbjct: 195 SLTNLTRLDLDG-NVIGDIKPLASLTN--LTRLDLDGNVIGDIKPLASLTNLSSLDLDDN 251
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
IGD ++ +A + NL L+L R + LA L NL LSL QI D I +
Sbjct: 252 QIGD--IKPLASL-TNLMGLDLR--RIVIGDIKPLA-SLTNLTDLSLDDNQIGD--IKPL 303
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
+ + +L + +S+ I+ + L +L +L L+L + D + PL
Sbjct: 304 ASLTNLTRLVLSSNQIR--------------DIKPLASLTNLSSLDLSGNVIGD--IKPL 347
Query: 432 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 485
++ L L L N + D+ L+SL+KLT L++ V +G KP SL
Sbjct: 348 ASLTNLSSLDLNNNKIGDI--KPLASLTKLTELTLSGNV-----IGDIKPLASL 394
>gi|157123338|ref|XP_001660123.1| leucine-rich transmembrane protein [Aedes aegypti]
gi|108884516|gb|EAT48741.1| AAEL000243-PA [Aedes aegypti]
Length = 999
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 153/366 (41%), Gaps = 50/366 (13%)
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
S+++ +WL L + L + L L L ++ + + L +L +LDL ++
Sbjct: 424 SSVQTIWLENNLLNSLDKDLFVDVVQLERLYLKNNSISSIESNAFNSLRRLRFLDLSYNR 483
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGN--EN 252
++N + K L L ++ + KLP ++ L L+LS+ + ILE N
Sbjct: 484 LTNLNEKLFKNMVELDELLISKNQIQKLPSNVFGSLQKLRVLDLSHNPL-GILESNVFHQ 542
Query: 253 KAPLAKISLAGTTFIN-EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
++ I+L G E EAF ++ L L+L +
Sbjct: 543 NFSVSVINLKGCELTRIESEAF------------------------KGLQNLNELNLDDN 578
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
+ + ++ + ++LR L L++ F+ L LP+L++L L I D S
Sbjct: 579 RLRSEDIKQID--ASSLRTLRLASNNFTVVRENTLE-RLPSLQVLVLERCSIRDLPYSLF 635
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
S +L +D+S+ ++ +L NLN + L L+ ++D L
Sbjct: 636 SKNNNLVKLDLSHNFLR------------ILKRNIFNNLNVFKELRLQNNSINDFPHIAL 683
Query: 432 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLDL 490
S L L L N LT+V +L L L +L ++D +++ +G + P L ++DL
Sbjct: 684 SNISTLETLILSNNQLTNVDFFKLHGLPNLRHLDLQDNSISSLTGFNTAILPH-LDMIDL 742
Query: 491 HGGWLL 496
G LL
Sbjct: 743 SGNLLL 748
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 175/421 (41%), Gaps = 58/421 (13%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
A + L+ LDLS ++T+ K ++ L++L +S+ + + SLQ L VL
Sbjct: 467 AFNSLRRLRFLDLSYN-RLTNLNEKLFKNMVELDELLISKNQIQKLPSNVFGSLQKLRVL 525
Query: 170 DLGGLPVTDL---------------------------VLRSLQVLTKLEYLD--LWGSQV 200
DL P+ L + LQ L +L D L +
Sbjct: 526 DLSHNPLGILESNVFHQNFSVSVINLKGCELTRIESEAFKGLQNLNELNLDDNRLRSEDI 585
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID----SILEGNENKAPL 256
A+ L+ RL+ N L + SL+ L L C+I S+ N N L
Sbjct: 586 KQIDASSLRTL-RLASNNFTVVRENTLERLPSLQVLVLERCSIRDLPYSLFSKNNN---L 641
Query: 257 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIG 314
K+ L+ F+ + ++ ++ L + N+S++ F L+ + LE L LS++ +
Sbjct: 642 VKLDLSH-NFLRILKRNIFNNLNVFKELRLQNNSINDFPHIALSNISTLETLILSNNQLT 700
Query: 315 DDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
+ V+ G NLR+L+L + SS G LP+L+++ LSG + ++
Sbjct: 701 N--VDFFKLHGLPNLRHLDLQDNSISSL-TGFNTAILPHLDMIDLSGNLLLALPENFFKH 757
Query: 374 MPSLKFIDISNTDIKGFIQQVGAETDLV----LSLTALQNLNHLERLNLEQTQVSDATLF 429
SL+ ID+S +E L L+LT N L+R++ + +D F
Sbjct: 758 SISLQRIDLSCNRFNQIPNAALSEFSLARLAWLNLTG----NPLQRIHHTMSVDADQRRF 813
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
P KEL H+S N LT ++ L L + + G+F +L++LD
Sbjct: 814 PF--LKEL-HISQTN--LTILTSKDFDIYPALQRLYLVQNRINRVSPGAFVTLSNLQILD 868
Query: 490 L 490
L
Sbjct: 869 L 869
>gi|32477277|ref|NP_870271.1| G protein-coupled receptor LGR4 [Rhodopirellula baltica SH 1]
gi|32447828|emb|CAD77346.1| probable G protein-coupled receptor LGR4 [Rhodopirellula baltica SH
1]
Length = 341
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMKSPVTDKTLTSISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKID 249
Query: 245 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L+ E K L +++ I E + + L L + +S+S L Q+K L
Sbjct: 250 NESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA-LPQLKPL 308
Query: 304 EHLD 307
+ L+
Sbjct: 309 QELE 312
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
S G + LPNL+ L + G DD +S +P+L + +T + V AE
Sbjct: 106 SDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAE-- 163
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
LN L+ ++L ++ V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 ----------LNELQDVSLMKSPVTDKTLTSISTLPKLTKLNLRGTKITGEAFEPISKL 212
>gi|320165727|gb|EFW42626.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 553
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 211/498 (42%), Gaps = 73/498 (14%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
S+ A +A L A +YL SL ++++ LT +T L LD ++ ++ L
Sbjct: 92 SISANALAGLTALQYL-SLQRNQLTSISANTFTGLTALTGLN-LDFNQFASIS---ADTL 146
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
++T+ L L G+T+ +SL L+VLDL + + +L LT + L L
Sbjct: 147 AGLTTMRTLSLGSNGITSISANAFTSLTALTVLDLSYNELPSISADALTGLTAMRTLSLQ 206
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS--------SLECLNLSNCTIDSI-- 246
+Q+++ A L+ L+L++ +LP+IS +L+ L+L+N I I
Sbjct: 207 RNQLTSISANTFTGLTALTGLDLSY---NELPSISANALTGLTALQYLSLNNNRITRISA 263
Query: 247 -----------LEGNENKAP-LAKISLAGTTFINE------------REAFLYIETSLLS 282
L N N+ P ++ +L G T + AF + T+L S
Sbjct: 264 NTFTGLTALTTLYLNYNQLPNISANALTGLTALRSLSLTQNNITTIHANAFAGL-TALAS 322
Query: 283 FLDVSN--SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+ V N SS+S LT + AL++L L+++ I S + A L L LS S
Sbjct: 323 LVLVQNQLSSISADA-LTGLTALQYLSLNNNRITRISANAFTGLTA-LTVLYLSYNELPS 380
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
LAG L L+ LSL+ QI A + + + +L + + N I + AE
Sbjct: 381 ISANALAG-LTALQYLSLNNNQITSIAAAAFAGLTALTHLPLDNNQIT----SISAE--- 432
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
A L+ L+ L+L Q++ + L L L ++ +S + + L+K
Sbjct: 433 -----AFTGLSALQLLSLNSNQITSIAANAFTGLNALTSLYLNQNNIAGISANAFTGLTK 487
Query: 461 LTNLSIRDAVLTNSGLGSFKP-PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 519
LT L + D T G FK P+ L L G W +E + P + +V
Sbjct: 488 LTQLYLDDNPFTTLPPGLFKGLPKLLYL----GYWYRSE--------LSPNNFTFGGNTV 535
Query: 520 ICPSDQIGSNGPSPSRTS 537
PS ++ P R+S
Sbjct: 536 APPSTYGSASQPYSKRSS 553
>gi|302768605|ref|XP_002967722.1| hypothetical protein SELMODRAFT_88742 [Selaginella moellendorffii]
gi|300164460|gb|EFJ31069.1| hypothetical protein SELMODRAFT_88742 [Selaginella moellendorffii]
Length = 645
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 182/426 (42%), Gaps = 66/426 (15%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS-ISTLEKLWLSE- 149
L ++++ C V L L + +++L L+ C++VTD G++ L + L+ L L
Sbjct: 130 LVEMDLSYCSYVEDDGLLGLARLNRIEKLKLTGCIRVTDMGLESLAAGCHRLKTLVLKGC 189
Query: 150 TGLTADGIALLSSL-QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAV 207
+T GI L+++ + L +LDL VTD ++ + L L L+L + V +R +
Sbjct: 190 VAITDAGIKLVAARSEELMILDLSFTEVTDEGVKYVSELKALRTLNLMACNNVGDRALSY 249
Query: 208 L----KMFPRLSF---LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
L K L N++ G+ LP + +L + S T D+ L+ E + +
Sbjct: 250 LQENCKSLVDLDVSRCQNVSSVGIAALPTLLTLHLCHCSQVTEDAFLD-FEKPNGIQTLR 308
Query: 261 LAGTTFIN---EREAFLYIETSLLSFLD---VSNSSLSRFCFLTQMKALEHLDL------ 308
L G F + +R A E LS V++ + R +T K+L+ LDL
Sbjct: 309 LDGCEFTHDSLDRVAAGCQELKELSLCKSRGVTDKRIDR--LITSCKSLKKLDLTCCFDV 366
Query: 309 ---------------------SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
SS M+ D+S+ MV L L++++ + AG+ +
Sbjct: 367 TEISLLSIARSSTSIKSLKLESSLMVSDNSLPMVFESCHLLEELDVTDCNLTGAGLEPI- 425
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSM----MPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
G+ L +L L+ I DY I ++ + L + G I V DL
Sbjct: 426 GNCVLLRVLKLAFCNISDYGIFFVGAGCHKLMELDLYRCRSVGDAGVISVVNGCQDL--- 482
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL-TDVSLHQLSS-LSKL 461
+ NL++ R +SDA++ ++ +L L +R +L T L Q+++ +L
Sbjct: 483 --RVLNLSYCSR-------ISDASMTAIARLSKLSQLEIRGCTLVTSDGLTQVAAGCKRL 533
Query: 462 TNLSIR 467
L I+
Sbjct: 534 VELDIK 539
>gi|290983152|ref|XP_002674293.1| predicted protein [Naegleria gruberi]
gi|284087882|gb|EFC41549.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
S+ + F+T+MK L LD+S++ IGD+ V+ ++ + L +L + N GV +
Sbjct: 123 SIEKPTFITEMKQLTSLDISNNRIGDEGVKFISEM-KQLISLGIYNNGIGDEGVKSII-E 180
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
+ L L + G QI D +S M L +DI+N Q G E + +
Sbjct: 181 MKRLTSLGIGGNQIGDEGAKSISEMKQLTSLDINNN-------QTGDE-----GVKFICE 228
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
+ L L + ++ D +S K+L L++ + D +S L +LT+L I
Sbjct: 229 MKQLTSLTIYNNRIGDEGAKSISEMKQLTSLNISENRIGDEGAIFISELKQLTSLDICYN 288
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
+ + + LK LD+ G + E
Sbjct: 289 RIGDKEAKFICEMKQLKSLDIGGNQIGDE 317
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+T M L LD+S ++ D G+K + + L L + G+ +G+ + ++ L+ L
Sbjct: 130 ITEMKQLTSLDISNN-RIGDEGVKFISEMKQLISLGIYNNGIGDEGVKSIIEMKRLTSLG 188
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV---LKMFPRLSFLN--LAWTGVT 225
+GG + D +S+ + +L LD+ +Q + G +K L+ N + G
Sbjct: 189 IGGNQIGDEGAKSISEMKQLTSLDINNNQTGDEGVKFICEMKQLTSLTIYNNRIGDEGAK 248
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 285
+ + L LN+S EN +I G FI+E + L+ LD
Sbjct: 249 SISEMKQLTSLNIS-----------EN-----RIGDEGAIFISELKQ--------LTSLD 284
Query: 286 VSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVA 322
+ + + F+ +MK L+ LD+ + IGD+ V+ ++
Sbjct: 285 ICYNRIGDKEAKFICEMKQLKSLDIGGNQIGDEGVKFIS 323
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E + + L SL++ + + + + M L L + ++ D G
Sbjct: 190 GGNQIGDEGAKSISEMKQLTSLDINN-NQTGDEGVKFICEMKQLTSLTIYNN-RIGDEGA 247
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L +SE + +G +S L+ L+ LD+ + D + + + +L+ L
Sbjct: 248 KSISEMKQLTSLNISENRIGDEGAIFISELKQLTSLDICYNRIGDKEAKFICEMKQLKSL 307
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNL 219
D+ G+Q+ + G + RL+ L++
Sbjct: 308 DIGGNQIGDEGVKFISEMTRLTSLDI 333
>gi|168701211|ref|ZP_02733488.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 702
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
A ++LR+L +T W + M L+ + LS ++TDAG + L ++ L+ L L
Sbjct: 519 ALKHLRALMTGGAG-ITDEGAWDVARMKRLECVSLSDTRRLTDAGARDLAALPNLKHLCL 577
Query: 148 SETGLTADGIALLSSLQNLS------------------------VLDLGGLPVTDLVLRS 183
S TG+T +G+ +L+ ++ L LDL G P +
Sbjct: 578 SRTGVTDEGVQVLAGVKTLRTLWLSEIKVGPAGVAALGRHPGLVALDLSGAPRGE--AEP 635
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L +T LEYL+L G+ R A L P L L+L
Sbjct: 636 LAGITTLEYLNLAGALTGERTLAALAKLPHLRVLHL 671
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 165/403 (40%), Gaps = 54/403 (13%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L LDLS +V D +K L + L+ L L T +T G+ L++++ L LDL L V
Sbjct: 196 LTHLDLS-FSRVGDDDLKLLAAFPKLKSLRLERTQVTDAGMKHLAAVEGLEALDLSRLRV 254
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
TD L+ L L L L L +QV+ G L+ F +LA +G + + +
Sbjct: 255 TDAGLKELAGLKNLRALTLLFTQVTGAG---LRPFAGAGLTHLALSGS----KVKAADVA 307
Query: 237 NLSNCTIDSIL--EGNENKAPLAKIS--------------LAGTTFINEREAFLYIETSL 280
++ C + L EG +A+++ L G A L
Sbjct: 308 DVVACRALAALAVEGRWPADAVAQLAGLPELRSLHFQSDLLDGKVLAELSGASKLEAVHL 367
Query: 281 LSFLDVSNSSLSRFCFL---TQMKA----------LEHLDLSSSMIGDDSVEMVACVGAN 327
+ D + + L R L Q +A + HLDLS + ++ + V N
Sbjct: 368 ATVTDDALAGLRRAGKLHTIPQARAERGRPAGPDEVVHLDLSGQPVTGAGLKEL-TVFRN 426
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM-----MPSLKFIDI 382
L L L NTR + G+G LA L L L+L DD A++ M + +L+ + +
Sbjct: 427 LDTLVLRNTRVAG-GIGALA-DLRKLSALTLPLYGGDDRAVTPAEMRRLAALDTLEELHL 484
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTF 434
+ G + V + +L Q+ L HL L ++D + ++
Sbjct: 485 HGVLVPGMARAVASIPNLTTLSGTFQDTDLREFPALKHLRALMTGGAGITDEGAWDVARM 544
Query: 435 KELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
K L +SL + LTD L++L L +L + +T+ G+
Sbjct: 545 KRLECVSLSDTRRLTDAGARDLAALPNLKHLCLSRTGVTDEGV 587
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 153/379 (40%), Gaps = 46/379 (12%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
E A+ +A L LRSL+ + L L+G + L+ + L+ AG++
Sbjct: 321 EGRWPADAVAQLAGLPELRSLHF-QSDLLDGKVLAELSGASKLEAVHLATVTDDALAGLR 379
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ T+ + +E G A + LDL G PVT L+ L V L+ L
Sbjct: 380 RAGKLHTIPQAR-AERGRPA-------GPDEVVHLDLSGQPVTGAGLKELTVFRNLDTLV 431
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTG----------VTKLPNISSLECLNLSNCTID 244
L ++V+ G L +LS L L G + +L + +LE L+L +
Sbjct: 432 LRNTRVAG-GIGALADLRKLSALTLPLYGGDDRAVTPAEMRRLAALDTLEELHLHGVLVP 490
Query: 245 SILEGNENKAPLAKISLAGT---TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+ + L +L+GT T + E A ++ + +++ + +MK
Sbjct: 491 GMARAVASIPNL--TTLSGTFQDTDLREFPALKHLRALMTGGAGITDEG---AWDVARMK 545
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
LE + LS + D+ NL++L LS T + GV +LAG + L L LS
Sbjct: 546 RLECVSLSDTRRLTDAGARDLAALPNLKHLCLSRTGVTDEGVQVLAG-VKTLRTLWLSEI 604
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
++ ++ + P L +D+S E + + +T L+ LN L E+T
Sbjct: 605 KVGPAGVAALGRHPGLVALDLSGAPR--------GEAEPLAGITTLEYLNLAGALTGERT 656
Query: 422 QVSDATLFPLSTFKELIHL 440
L+ +L HL
Sbjct: 657 ---------LAALAKLPHL 666
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 123/313 (39%), Gaps = 57/313 (18%)
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTID 244
L +LDL S+V + +L FP+L L L T VT L + LE L+LS
Sbjct: 196 LTHLDLSFSRVGDDDLKLLAAFPKLKSLRLERTQVTDAGMKHLAAVEGLEALDLSRL--- 252
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
+++ AG + E + L F V+ + L F L
Sbjct: 253 -------------RVTDAG---LKELAGLKNLRALTLLFTQVTGAGLRPFAG----AGLT 292
Query: 305 HLDLSSSMI-GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
HL LS S + D ++VAC L L + R+ + V LAG LP L L +
Sbjct: 293 HLALSGSKVKAADVADVVACRA--LAALAVEG-RWPADAVAQLAG-LPELRSLHFQSDLL 348
Query: 364 DDYAISYMSMMPSLKFIDISN-TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
D ++ +S L+ + ++ TD D + L L+ + + E+ +
Sbjct: 349 DGKVLAELSGASKLEAVHLATVTD------------DALAGLRRAGKLHTIPQARAERGR 396
Query: 423 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 482
+ E++HL L +T L +L+ L L +R+ + G+G+
Sbjct: 397 PAGP--------DEVVHLDLSGQPVTGAGLKELTVFRNLDTLVLRNTRVAG-GIGALADL 447
Query: 483 RSLK--LLDLHGG 493
R L L L+GG
Sbjct: 448 RKLSALTLPLYGG 460
>gi|423564273|ref|ZP_17540549.1| hypothetical protein II5_03677 [Bacillus cereus MSX-A1]
gi|401197304|gb|EJR04237.1| hypothetical protein II5_03677 [Bacillus cereus MSX-A1]
Length = 760
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIRDAVLTN 473
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|423361390|ref|ZP_17338892.1| hypothetical protein IC1_03369 [Bacillus cereus VD022]
gi|401079838|gb|EJP88132.1| hypothetical protein IC1_03369 [Bacillus cereus VD022]
Length = 760
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIRDAVLTN 473
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|290980851|ref|XP_002673145.1| predicted protein [Naegleria gruberi]
gi|284086726|gb|EFC40401.1| predicted protein [Naegleria gruberi]
Length = 468
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 85 YLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
Y+ + L L ++D + A + ++ M L L + + D G KH+ ++ L K
Sbjct: 251 YISEMKQLTHLYISDSLIRSEGAKY-ISEMKQLTNLFIENN-DIDDEGAKHISTMKELTK 308
Query: 145 LWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
L++ L +D G LS L+NL+VL +G + + + L L L + + +++ +
Sbjct: 309 LYMQGNRLISDEGAKYLSELKNLTVLFIGDNRIGNEGAKHLSELKNLTSIYVSYTEIGDE 368
Query: 204 GAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL 261
GA L +L+ L + + G+ +IS+L+ L + ++I GNE
Sbjct: 369 GAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQYNNI--GNE---------- 416
Query: 262 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVE 319
G +I+E + L+ LD+S +++ +L+QMK L HL++ ++ ++
Sbjct: 417 -GAKYISELKQ--------LTDLDISYNNIGTEGADYLSQMKQLTHLEIETNSDAEEGEN 467
Query: 320 M 320
M
Sbjct: 468 M 468
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 46/343 (13%)
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G KH+ + L L+++ + +G L L+NL+ L++ + + + L +L
Sbjct: 128 GAKHVSEMKQLTNLYVNANNIGTEGAKFLRELKNLTYLNISENDIGVEGAKYISELKQLT 187
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSI 246
LD+ + + GA + +L+ L N+ G + ++ L+ LN+S ++
Sbjct: 188 DLDISYNNIGTEGAKYISDLKQLTTLDIESNNIGTEGAKYISELNQLQVLNISYSSLGD- 246
Query: 247 LEGNENKAPLAKISLAGTTFINEREAF--LYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
G +I+E + LYI SL+ S ++ ++++MK L
Sbjct: 247 ---------------KGAQYISEMKQLTHLYISDSLIR------SEGAK--YISEMKQLT 283
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQI 363
+L + ++ I D+ + ++ + L L + R S G L+ L NL +L + +I
Sbjct: 284 NLFIENNDIDDEGAKHISTM-KELTKLYMQGNRLISDEGAKYLS-ELKNLTVLFIGDNRI 341
Query: 364 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
+ ++S + +L I +S T+I G E LS LN L L + +
Sbjct: 342 GNEGAKHLSELKNLTSIYVSYTEI-------GDEGAKYLS-----ELNKLTILQIGYNGI 389
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+S KEL L ++ ++ + +S L +LT+L I
Sbjct: 390 GAEGAKHISNLKELTMLKIQYNNIGNEGAKYISELKQLTDLDI 432
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 161/378 (42%), Gaps = 48/378 (12%)
Query: 133 MKHLLSISTLEKL--WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
MKH+ S+ + + +E G+ +G +S ++ L+ L + + + L+ L L
Sbjct: 103 MKHVTSLEIDDNIEGTTNENGIGVEGAKHVSEMKQLTNLYVNANNIGTEGAKFLRELKNL 162
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILE 248
YL++ + + GA + +L+ L++++ G IS L+ L T+D +E
Sbjct: 163 TYLNISENDIGVEGAKYISELKQLTDLDISYNNIGTEGAKYISDLKQL----TTLD--IE 216
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHL 306
N I G +I+E + L L++S SSL ++++MK L HL
Sbjct: 217 SN-------NIGTEGAKYISE--------LNQLQVLNISYSSLGDKGAQYISEMKQLTHL 261
Query: 307 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS---LSGTQ- 362
+S S+I + + ++ + L NL + N G A H+ ++ L+ + G +
Sbjct: 262 YISDSLIRSEGAKYISEM-KQLTNLFIENNDIDDEG----AKHISTMKELTKLYMQGNRL 316
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
I D Y+S + +L + I + ++G E L L +L + + T+
Sbjct: 317 ISDEGAKYLSELKNLTVLFIGDN-------RIGNE-----GAKHLSELKNLTSIYVSYTE 364
Query: 423 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 482
+ D LS +L L + + +S+L +LT L I+ + N G
Sbjct: 365 IGDEGAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQYNNIGNEGAKYISEL 424
Query: 483 RSLKLLDLHGGWLLTEDA 500
+ L LD+ + TE A
Sbjct: 425 KQLTDLDISYNNIGTEGA 442
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 72 LRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
++G + E YL + L L + D R+ + L+ + L + +S ++ D
Sbjct: 311 MQGNRLISDEGAKYLSELKNLTVLFIGD-NRIGNEGAKHLSELKNLTSIYVS-YTEIGDE 368
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G K+L ++ L L + G+ A+G +S+L+ L++L + + + + + L +L
Sbjct: 369 GAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQYNNIGNEGAKYISELKQLT 428
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
LD+ + + GA L +L+ L +
Sbjct: 429 DLDISYNNIGTEGADYLSQMKQLTHLEI 456
>gi|365824233|gb|AEX01718.1| toll-like receptor 3 [Epinephelus coioides]
Length = 920
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 182/415 (43%), Gaps = 53/415 (12%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
+LR + + T + L T +T L EL + V++ + + L + TL + +
Sbjct: 270 FLRKMKLVTLTNTTFTGLQK-TSLTFL-ELSGNGMVRIEEGSFRWLSRLQTLILVDNNIK 327
Query: 151 GLTADGIALLSSLQNLSVLDL----GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LT D L SL+ L + + +P+ D S Q L+ LE L L + V N
Sbjct: 328 HLTKDTFQGLKSLEKLQLTNALASSHPIPIIDDF--SFQPLSALESLILQRTAVRNITEH 385
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
L L+++W+ T L NIS+ ++L+ +PL K++L GT
Sbjct: 386 TFTGLTSLKELDMSWSSYTSLRNISNKTFISLAG-------------SPLRKLNLTGT-- 430
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
A I+ S L + L + F+ Q E + G D VE + +
Sbjct: 431 -----AIAQIDPRSFSVLRNLTTLLLDYNFIKQNLTGEEFE------GLDQVEQIY-MSN 478
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI----SYMSMMPSLKFIDI 382
N + +NLS+ F + +P+L +L+L + I + AI S +P+L ++D+
Sbjct: 479 NHQKVNLSSDSFVN---------VPSLRVLTLGRSLIAE-AINCDPSPFRHLPNLTYLDL 528
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
SN +I I++ E + L + LQ+ N+L RL + + LF +T + LI L L
Sbjct: 529 SNNNIAN-IRENTFEGLVNLKVLKLQH-NNLARL-WKSANLGGPVLFLKNTPRLLI-LDL 584
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 497
+ L ++ L LS L NLS+ +L + F +SL+ L+L + T
Sbjct: 585 DSNGLDEIPAEALRGLSDLHNLSLASNLLNSLQEFIFDDLKSLRFLNLQKNLITT 639
>gi|356563680|ref|XP_003550089.1| PREDICTED: F-box/LRR-repeat protein 4-like [Glycine max]
Length = 584
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 175/408 (42%), Gaps = 48/408 (11%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSAL--WALTGMTCLKELDLSRC 125
+A++L+G D A + L LN+ C +T + L AL LK L ++ C
Sbjct: 143 KALDLQGCYVGDQGLAAVGQCCKQLEDLNLRFCEGLTDTGLVELALGVGKSLKSLGVAAC 202
Query: 126 VKVTDAGMKHLLS-ISTLEKLWLSETGLTADG-IALLSSLQNLSVLDLGGLPVTDLVLRS 183
K+TD M+ + S +LE L L + G +A+ L VL L + VTD L++
Sbjct: 203 AKITDISMEAVGSHCRSLETLSLDSECIHNKGLLAVAQGCPTLKVLKLQCINVTDDALQA 262
Query: 184 LQV-LTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 241
+ LE L L+ Q +++G L G KL N++ ++C +S+
Sbjct: 263 VGANCLSLELLALYSFQRFTDKG------------LRGIGNGCKKLKNLTLIDCYFISDK 310
Query: 242 TIDSILEGNENKAPLA-----KISLAGTTFINEREAFLYIETSLL---SFLDVSNSSLSR 293
+++I G + L I G +I +L E +LL DVS + +
Sbjct: 311 GLEAIANGCKELTHLEVNGCHNIGTLGLEYIGRSCQYL-TELALLYCHRIGDVSLLEVGK 369
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPN 352
C Q+ L +D SS IGDD++ +A NL+ L++ + + G+ + H +
Sbjct: 370 GCKFLQV--LHLVDCSS--IGDDAMCSIANGCRNLKKLHIRRCYKIGNKGLIAVGKHCKS 425
Query: 353 LEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV----GAETDLVLSLTAL 407
L LS+ ++ D A++ ++ SL ++++S G + G L ++ L
Sbjct: 426 LTDLSIRFCDRVGDGALTAIAEGCSLHYLNVSGCHQIGDAGVIAIARGCPQLCYLDVSVL 485
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
QNL + L + + KE++ R +TDV L L
Sbjct: 486 QNLGDMAMAELGE---------HCTLLKEIVLSHCRQ--ITDVGLTHL 522
>gi|168054406|ref|XP_001779622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668936|gb|EDQ55533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 627
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 175/397 (44%), Gaps = 56/397 (14%)
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS-ISTLEKLWLSETGLTAD 155
+ CR VT L AL T L+ L L C + D+G++++ + L + LS T ++
Sbjct: 141 LNSCRDVTDVGLSALRRCTELRILGLKYCSGIGDSGIQNVATGCPQLRNIDLSFTEVSDK 200
Query: 156 GIALLSSLQNLSVLD-LGGLPVTDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFP 212
G++ L+ L+NL L + + VTD L L+ L+ LD+ S VS+RG L
Sbjct: 201 GVSSLALLKNLECLSIISCINVTDKGLSCLRSGCMSLQKLDVAKCSNVSSRGILALTGIS 260
Query: 213 -RLSFLNLAWTG------VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
L LNL++ + +L+ + L+ C I + +SL G
Sbjct: 261 LGLQELNLSYCKKISDVLFASFQKLKTLQVVKLNGCAIGRV-----------NLSLIGCK 309
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACV 324
+ E SL V+++S+ +T L+ LDL+ I D ++E +A
Sbjct: 310 ELK--------ELSLSKCQGVTDASVVG--VVTACTGLQKLDLTCCRDITDVALEAIAAN 359
Query: 325 GANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI--- 380
L +L + N +S G+ ++ + +LE L L+ + ++D + +S ++ +
Sbjct: 360 CKGLLSLRMENCPSVTSEGLTLIGRNFAHLEELDLTDSNLNDNGLKSISRCTEMRLLKLG 419
Query: 381 ---DISNTDIKGF------------IQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVS 424
DI+N + + VG D V ++ + + L+ +NL ++
Sbjct: 420 YCMDITNAGLASISSTCKNLREFDCYRSVGISDDGVAAIA--RGCDRLKVVNLSYCASIT 477
Query: 425 DATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSK 460
DA+L L+ ++L+ L LR S +T V + + + K
Sbjct: 478 DASLHSLALLRDLVQLELRACSQITSVGISYIGASCK 514
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 167/397 (42%), Gaps = 71/397 (17%)
Query: 117 LKELDLSRCVKVTD---------------------------AGMKHLLSISTLEKLWLSE 149
++ LDLS CV+VTD AG+K L+ S+L+ + ++
Sbjct: 59 VEHLDLSSCVEVTDQCLATVAKFTNSRLLSIKLIRTKGFGIAGVKSLVECSSLQDVDVTH 118
Query: 150 TGLTADG--IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAA 206
D I L + VTD+ L +L+ T+L L L + S + + G
Sbjct: 119 CTQIGDAEVIVLSKLKHLQKLKLNSCRDVTDVGLSALRRCTELRILGLKYCSGIGDSGIQ 178
Query: 207 -VLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEG----NENKAPL 256
V P+L ++L++T GV+ L + +LECL++ +C I+ +G L
Sbjct: 179 NVATGCPQLRNIDLSFTEVSDKGVSSLALLKNLECLSIISC-INVTDKGLSCLRSGCMSL 237
Query: 257 AKISLAGTTFINEREAFLYIETSL------LSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
K+ +A + ++ R SL LS+ + L F ++K L+ + L+
Sbjct: 238 QKLDVAKCSNVSSRGILALTGISLGLQELNLSYCKKISDVL--FASFQKLKTLQVVKLNG 295
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAI 368
IG ++ ++ C L+ L+LS + + A V + L+ L L+ + I D A+
Sbjct: 296 CAIGRVNLSLIGC--KELKELSLSKCQGVTDASVVGVVTACTGLQKLDLTCCRDITDVAL 353
Query: 369 SYMSMMPSLKFIDISNTDIKGFI----QQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
++ + KG + + + T L+L +N HLE L+L + ++
Sbjct: 354 EAIA------------ANCKGLLSLRMENCPSVTSEGLTLIG-RNFAHLEELDLTDSNLN 400
Query: 425 DATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSK 460
D L +S E+ L L +T+ L +SS K
Sbjct: 401 DNGLKSISRCTEMRLLKLGYCMDITNAGLASISSTCK 437
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 143/329 (43%), Gaps = 48/329 (14%)
Query: 90 RYLRSLNVADCRRVT-SSALWALTGMTCLKELDLSRCVKVTD-------AGMKHLLSIST 141
+ L+ L+++ C+ VT +S + +T T L++LDL+ C +TD A K LLS+
Sbjct: 309 KELKELSLSKCQGVTDASVVGVVTACTGLQKLDLTCCRDITDVALEAIAANCKGLLSLRM 368
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQV 200
++ GLT G + +L LDL + D L+S+ T++ L L + +
Sbjct: 369 ENCPSVTSEGLTLIG----RNFAHLEELDLTDSNLNDNGLKSISRCTEMRLLKLGYCMDI 424
Query: 201 SNRGAAV-------LKMFPRLSFLNLAWTGVTKLP-NISSLECLNLSNCTIDSILEGNEN 252
+N G A L+ F + ++ GV + L+ +NLS C SI +
Sbjct: 425 TNAGLASISSTCKNLREFDCYRSVGISDDGVAAIARGCDRLKVVNLSYCA--SITD---- 478
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS- 311
A L ++L E A I + +S++ S K L LD+
Sbjct: 479 -ASLHSLALLRDLVQLELRACSQITSVGISYIGAS------------CKHLRELDIKRCR 525
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH--LPNLEILSLSGTQIDDYAIS 369
+GD V ++ NLR +NLS T + G+ +A + +++++ + D +A +
Sbjct: 526 FVGDPGVLALSRGCRNLRQINLSYTALTDLGMTAVANMSCIQDMKLVHMKNVTSDSFART 585
Query: 370 YMSMMPSLK----FIDISNTDIKGFIQQV 394
++ SLK I + T G I Q+
Sbjct: 586 LLA-CGSLKKVKLLIGLHTTLAPGVISQL 613
>gi|218896361|ref|YP_002444772.1| internalin [Bacillus cereus G9842]
gi|218544923|gb|ACK97317.1| putative internalin [Bacillus cereus G9842]
Length = 760
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIRDAVLTN 473
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|195430566|ref|XP_002063325.1| GK21848 [Drosophila willistoni]
gi|194159410|gb|EDW74311.1| GK21848 [Drosophila willistoni]
Length = 543
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 353 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 412
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 413 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGML 472
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ SLQ L L++G +TD L++L + LT L+ +DL+G +Q++++G ++ P+L
Sbjct: 473 KIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLTSKGIDIIMKLPKL 532
Query: 215 SFLNLA 220
LNL
Sbjct: 533 QKLNLG 538
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 138/330 (41%), Gaps = 70/330 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SLN++ C V L + LK LDLS C ++TD +
Sbjct: 241 LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGR-------------- 286
Query: 150 TGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDL---WGSQVSNR 203
+ L+NL L+LGG + T L+L + L KL++L+L W +S++
Sbjct: 287 ---------IAQHLRNLETLELGGCCNITNTGLLLIAWG-LKKLKHLNLRSCW--HISDQ 334
Query: 204 GAAVLKMFPRLSF---LNLAWTGVTKLPNIS------------SLECLNLSNC--TIDSI 246
G L F R + L L + G+ +S SL+ +NLS C DS
Sbjct: 335 GIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSG 394
Query: 247 LEGNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+ L +++L I++ A+L S ++ LDVS FC +AL H
Sbjct: 395 LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVS------FCDKISDQALTH 448
Query: 306 ----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 354
L L+ I D + +A L NLN+ +R + G+ LA L NL+
Sbjct: 449 IAQGLYRLRSLSLNQCQITDQGMLKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLK 508
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G TQ+ I + +P L+ +++
Sbjct: 509 TIDLYGCTQLTSKGIDIIMKLPKLQKLNLG 538
>gi|29823176|emb|CAD15503.2| probable lrr-gala family type III effector protein (gala 5)
[Ralstonia solanacearum GMI1000]
Length = 538
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 134/318 (42%), Gaps = 35/318 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ AE L L SLNV++ R + AL T L L++S ++ AG K L
Sbjct: 181 IGAEGARLLANHPTLTSLNVSNGR-IGPEGAQALAANTRLTTLNVS-GNRIGVAGAKALA 238
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG--GLPVTDLVLRSLQVLTKLEYLDL 195
+ TL L +S+ + +G L++ L+ LD G+ V +L L L +
Sbjct: 239 ANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDGAT--ALAASRTLTSLAI 296
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
G+++ + G L RL+ LN+ TGV ++ L S L+GN+
Sbjct: 297 GGNEIGDAGVLALAANARLTTLNVESTGV----GADGVKALAASKTLTWLRLDGND---- 348
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
I AG T L TSL + L+ S L L LDL + IG
Sbjct: 349 ---IGNAGATA-------LAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIG 398
Query: 315 DDSVEMVAC----VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
D V ++ V ++R NL + ++ V + AG L L +SG I D
Sbjct: 399 DAGVRALSANATLVWLSVRRNNLED----ASAVSLAAGK--TLTTLDISGNGIQDQGAKA 452
Query: 371 MSMMPSLKFIDISNTDIK 388
++ P+L +D+S+ DIK
Sbjct: 453 LAANPTLTTLDVSSNDIK 470
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 141/352 (40%), Gaps = 35/352 (9%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LK LDLSRC +T AG+ HL + L +L + + A+G LL++ L+ L++
Sbjct: 146 LKALDLSRCRGSITAAGIAHLSRLP-LVRLNVRNKRIGAEGARLLANHPTLTSLNVSNGR 204
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ ++L T+L L++ G+++ GA L L L+++ I
Sbjct: 205 IGPEGAQALAANTRLTTLNVSGNRIGVAGAKALAANQTLRSLDVSDN------RIGDEGA 258
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
L+ CT + L+ N N I + G T + + D +L+
Sbjct: 259 RELAACTQLTTLDANRNG-----IGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANA 313
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
LT L++ S+ +G D V+ +A L L L +AG LA +L
Sbjct: 314 RLTT------LNVESTGVGADGVKALAA-SKTLTWLRLDGNDIGNAGATALAAST-SLTT 365
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAETDLVLSLTALQNLNHLE 414
L L ++I ++ L +D+ DI ++ + A LV
Sbjct: 366 LHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVW------------ 413
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L++ + + DA+ L+ K L L + + D L++ LT L +
Sbjct: 414 -LSVRRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDV 464
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 157/407 (38%), Gaps = 80/407 (19%)
Query: 119 ELDLSRCVKVTDAGMKHLL---SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
E D+ V AG+ +L + LEKL L+ T T D DL GLP
Sbjct: 99 EADMRELVIKDRAGLAGVLRAGNYPALEKLTLAGT-FTDD--------------DLRGLP 143
Query: 176 VTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFP--RLSFLN--LAWTGVTKLP 228
+ L+ LDL GS ++ G A L P RL+ N + G L
Sbjct: 144 AS------------LKALDLSRCRGS-ITAAGIAHLSRLPLVRLNVRNKRIGAEGARLLA 190
Query: 229 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
N +L LN+SN I P +LA T L+ L+VS
Sbjct: 191 NHPTLTSLNVSNGRI----------GPEGAQALAANTR--------------LTTLNVSG 226
Query: 289 S--SLSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSSAGVGI 345
+ ++ L + L LD+S + IGD+ E+ AC L L+ + G
Sbjct: 227 NRIGVAGAKALAANQTLRSLDVSDNRIGDEGARELAACT--QLTTLDANRNGIGVDGATA 284
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQQVGAETDLV--- 401
LA L L++ G +I D + ++ L +++ +T + ++ + A L
Sbjct: 285 LAASR-TLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLR 343
Query: 402 --------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
TAL L L+LE +++ L+ +L L L + D +
Sbjct: 344 LDGNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVR 403
Query: 454 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
LS+ + L LS+R L ++ S ++L LD+ G + + A
Sbjct: 404 ALSANATLVWLSVRRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGA 450
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR----------- 124
N + L A + LRSL+V+D R+ L T L LD +R
Sbjct: 227 NRIGVAGAKALAANQTLRSLDVSD-NRIGDEGARELAACTQLTTLDANRNGIGVDGATAL 285
Query: 125 ------------CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
++ DAG+ L + + L L + TG+ ADG+ L++ + L+ L L
Sbjct: 286 AASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD 345
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
G + + +L T L L L S++ GA L +L+ L+L + +
Sbjct: 346 GNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDI 397
>gi|423404057|ref|ZP_17381230.1| hypothetical protein ICW_04455 [Bacillus cereus BAG2X1-2]
gi|423475313|ref|ZP_17452028.1| hypothetical protein IEO_00771 [Bacillus cereus BAG6X1-1]
gi|401647264|gb|EJS64873.1| hypothetical protein ICW_04455 [Bacillus cereus BAG2X1-2]
gi|402436415|gb|EJV68446.1| hypothetical protein IEO_00771 [Bacillus cereus BAG6X1-1]
Length = 752
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLASLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLASLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|171913798|ref|ZP_02929268.1| hypothetical protein VspiD_21505 [Verrucomicrobium spinosum DSM
4136]
Length = 1196
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 129 TDAGMKHLLSI-STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+DA +K L SI S+L L L+ T +T G+A L+ + NL L L VTD SL+ L
Sbjct: 468 SDANLKELESIGSSLVALDLARTKVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGL 527
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
KLEYL+L+G++V+++ L+ L L L TGVT+
Sbjct: 528 AKLEYLNLYGTKVTDKILGDLEGLKALKALYLWQTGVTE 566
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
+ L LDL+R KVTDAG+ L ++ L++L L T +T + L L L L+L G
Sbjct: 480 SSLVALDLART-KVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGLAKLEYLNLYGT 538
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
VTD +L L+ L L+ L LW + V+ A + +N+ WT
Sbjct: 539 KVTDKILGDLEGLKALKALYLWQTGVTEPAAEAFRAKRPGLLVNIGWT 586
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
+DL+R KVTD+G+ + ++ LE+L L T +T G+ L+ L L L+L G VTD
Sbjct: 997 VDLART-KVTDSGLAMVAGMTNLERLHLENTAITDAGLDHLAKLGKLEYLNLYGTKVTDA 1055
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
L L L+ L +W + + GA L+
Sbjct: 1056 GLAKLAAAKSLKKLFVWQTGATREGAKKLE 1085
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 145 LW--LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
+W L+ T +T G+A+++ + NL L L +TD L L L KLEYL+L+G++V++
Sbjct: 995 IWVDLARTKVTDSGLAMVAGMTNLERLHLENTAITDAGLDHLAKLGKLEYLNLYGTKVTD 1054
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTK 226
G A L L L + TG T+
Sbjct: 1055 AGLAKLAAAKSLKKLFVWQTGATR 1078
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 409 NLNHLER-------LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
NL LE L+L +T+V+DA L L+ L L L N ++TD + L L+KL
Sbjct: 471 NLKELESIGSSLVALDLARTKVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGLAKL 530
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV---WHE 516
L++ +T+ LG + ++LK L L W +TE A F P + V W E
Sbjct: 531 EYLNLYGTKVTDKILGDLEGLKALKALYL---WQTGVTEPAAEAFRAKRPGLLVNIGWTE 587
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
+DL+ + + D + MVA + NL L+L NT + AG+ LA L LE L+L GT++ D
Sbjct: 997 VDLARTKVTDSGLAMVAGM-TNLERLHLENTAITDAGLDHLA-KLGKLEYLNLYGTKVTD 1054
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGA 396
++ ++ SLK K F+ Q GA
Sbjct: 1055 AGLAKLAAAKSLK---------KLFVWQTGA 1076
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
++ GD + ++A V +L ++L+ T+ + +G+ ++AG + NLE L L T I D +
Sbjct: 975 AADKFGDKELALLAPVNPHLIWVDLARTKVTDSGLAMVAG-MTNLERLHLENTAITDAGL 1033
Query: 369 SYMSMMPSLKFIDISNTDI 387
+++ + L+++++ T +
Sbjct: 1034 DHLAKLGKLEYLNLYGTKV 1052
>gi|342184564|emb|CCC94046.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 852
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 296 FLTQMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
F+T +K L LDL + + D D +V C L+ L L++ R S I G L L
Sbjct: 346 FITSLKNLVELDLRENWVTDEDCASLVHC--KKLQVLRLTSCRHVSDVRWI--GSLSMLH 401
Query: 355 ILSLSGTQI-----------------------DDYAISYMSMMPSLKFIDISNTDIKGF- 390
L LS T D IS++ + LK +D+S TD+ G
Sbjct: 402 TLDLSHTHARNCWFEALSQCRRMTELSLAFSKDVVDISFIGELRMLKHLDLSGTDVGGGN 461
Query: 391 IQQVGA----------ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
++ +G E LV L L+ L LE LN+E T V D+++ ++ ++L L
Sbjct: 462 LRVIGRCTMLVFLSLRECRLVTDLRFLETLQELESLNVEGTAVVDSSVCSIALCRKLKFL 521
Query: 441 SLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 499
SLR L DV L L L L + +T G+ + + SL+ +D G ++
Sbjct: 522 SLRYCHQLKDVRC--LQELKMLETLDLAGTYVTEEGVSTLRQCISLRHVDFTGCSFISHL 579
Query: 500 AIL 502
A L
Sbjct: 580 AFL 582
>gi|30019482|ref|NP_831113.1| internalin [Bacillus cereus ATCC 14579]
gi|29895026|gb|AAP08314.1| Internalin [Bacillus cereus ATCC 14579]
Length = 760
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 393 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRD 468
++D+S +S+L KL LS IRD
Sbjct: 451 ISDLS--PVSNLKKLVFLSFVANEIRD 475
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 368 KPLYTLPLKDLVLT 381
>gi|17546520|ref|NP_519922.1| GALA protein 3 [Ralstonia solanacearum GMI1000]
Length = 522
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 134/318 (42%), Gaps = 35/318 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ AE L L SLNV++ R + AL T L L++S ++ AG K L
Sbjct: 165 IGAEGARLLANHPTLTSLNVSNGR-IGPEGAQALAANTRLTTLNVS-GNRIGVAGAKALA 222
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG--GLPVTDLVLRSLQVLTKLEYLDL 195
+ TL L +S+ + +G L++ L+ LD G+ V +L L L +
Sbjct: 223 ANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDGAT--ALAASRTLTSLAI 280
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
G+++ + G L RL+ LN+ TGV ++ L S L+GN+
Sbjct: 281 GGNEIGDAGVLALAANARLTTLNVESTGV----GADGVKALAASKTLTWLRLDGND---- 332
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
I AG T L TSL + L+ S L L LDL + IG
Sbjct: 333 ---IGNAGATA-------LAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIG 382
Query: 315 DDSVEMVAC----VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
D V ++ V ++R NL + ++ V + AG L L +SG I D
Sbjct: 383 DAGVRALSANATLVWLSVRRNNLED----ASAVSLAAGK--TLTTLDISGNGIQDQGAKA 436
Query: 371 MSMMPSLKFIDISNTDIK 388
++ P+L +D+S+ DIK
Sbjct: 437 LAANPTLTTLDVSSNDIK 454
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 141/352 (40%), Gaps = 35/352 (9%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LK LDLSRC +T AG+ HL + L +L + + A+G LL++ L+ L++
Sbjct: 130 LKALDLSRCRGSITAAGIAHLSRLP-LVRLNVRNKRIGAEGARLLANHPTLTSLNVSNGR 188
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ ++L T+L L++ G+++ GA L L L+++ I
Sbjct: 189 IGPEGAQALAANTRLTTLNVSGNRIGVAGAKALAANQTLRSLDVSDN------RIGDEGA 242
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
L+ CT + L+ N N I + G T + + D +L+
Sbjct: 243 RELAACTQLTTLDANRNG-----IGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANA 297
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
LT L++ S+ +G D V+ +A L L L +AG LA +L
Sbjct: 298 RLTT------LNVESTGVGADGVKALAA-SKTLTWLRLDGNDIGNAGATALAAST-SLTT 349
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAETDLVLSLTALQNLNHLE 414
L L ++I ++ L +D+ DI ++ + A LV
Sbjct: 350 LHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVW------------ 397
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L++ + + DA+ L+ K L L + + D L++ LT L +
Sbjct: 398 -LSVRRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDV 448
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 157/407 (38%), Gaps = 80/407 (19%)
Query: 119 ELDLSRCVKVTDAGMKHLL---SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
E D+ V AG+ +L + LEKL L+ T T D DL GLP
Sbjct: 83 EADMRELVIKDRAGLAGVLRAGNYPALEKLTLAGT-FTDD--------------DLRGLP 127
Query: 176 VTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFP--RLSFLN--LAWTGVTKLP 228
+ L+ LDL GS ++ G A L P RL+ N + G L
Sbjct: 128 AS------------LKALDLSRCRGS-ITAAGIAHLSRLPLVRLNVRNKRIGAEGARLLA 174
Query: 229 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
N +L LN+SN I P +LA T L+ L+VS
Sbjct: 175 NHPTLTSLNVSNGRI----------GPEGAQALAANTR--------------LTTLNVSG 210
Query: 289 S--SLSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSSAGVGI 345
+ ++ L + L LD+S + IGD+ E+ AC L L+ + G
Sbjct: 211 NRIGVAGAKALAANQTLRSLDVSDNRIGDEGARELAACT--QLTTLDANRNGIGVDGATA 268
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQQVGAETDLV--- 401
LA L L++ G +I D + ++ L +++ +T + ++ + A L
Sbjct: 269 LAASR-TLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLR 327
Query: 402 --------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
TAL L L+LE +++ L+ +L L L + D +
Sbjct: 328 LDGNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVR 387
Query: 454 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
LS+ + L LS+R L ++ S ++L LD+ G + + A
Sbjct: 388 ALSANATLVWLSVRRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGA 434
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR----------- 124
N + L A + LRSL+V+D R+ L T L LD +R
Sbjct: 211 NRIGVAGAKALAANQTLRSLDVSD-NRIGDEGARELAACTQLTTLDANRNGIGVDGATAL 269
Query: 125 ------------CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
++ DAG+ L + + L L + TG+ ADG+ L++ + L+ L L
Sbjct: 270 AASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD 329
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
G + + +L T L L L S++ GA L +L+ L+L + +
Sbjct: 330 GNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDI 381
>gi|428212495|ref|YP_007085639.1| hypothetical protein Oscil6304_2053 [Oscillatoria acuminata PCC
6304]
gi|428000876|gb|AFY81719.1| leucine-rich repeat (LRR) protein [Oscillatoria acuminata PCC 6304]
Length = 455
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 67/337 (19%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L +++ LE LWL E + +A +SL L+ L L G + D+ L LT LE L
Sbjct: 160 LTNLTNLEVLWLDENKIGE--VASFASLTQLTQLHLSGNQIEDVA--PLANLTNLE--SL 213
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC---LNLSNCTIDSILEGNEN 252
W ++ + A L +L+ L L+ + L + L L L+N I N
Sbjct: 214 WLNENKIKDVASLVSMTKLTQLYLSSNEIEDLAPLKGLPEMAELQLNNNQI-------VN 266
Query: 253 KAPLAKISLAGTTFINE---REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
APLA ++ T +NE ++ + L FL ++ + + L + LE L L
Sbjct: 267 VAPLASLTNLTTLELNENQIKDIAPLASLTQLGFLQLTKNQIVNISPLATLTKLETLQLL 326
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ I D V LA L NL L+L QI D A
Sbjct: 327 YNEIKD---------------------------VAPLAS-LTNLTFLTLGENQIKDVA-- 356
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
++ + L +D+SN +IK + L NL L L+L Q+ D
Sbjct: 357 PLASLTELTSLDLSNNEIK--------------DIDPLANLTQLTFLHLSDNQIKDVA-- 400
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
PL++ +L HL LRN + D++ +L +L+++ N S+
Sbjct: 401 PLASLTQLKHLHLRNNEIKDIA--RLPNLTQMDNFSV 435
>gi|38194513|gb|AAR13263.1| F-box and leucine-rich repeat protein 13 transcript variant 2 [Homo
sapiens]
Length = 690
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 204
TD L+ L + KL YLDL G +QVS +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQVSVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 205 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 259
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 318
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 319 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 374
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 375 PSLKFIDISNTDI 387
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + L +DL G+ +SN G VL +L L+++
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
>gi|417399805|gb|JAA46888.1| Putative f-box/lrr-repeat protein 14 [Desmodus rotundus]
Length = 368
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 151/328 (46%), Gaps = 39/328 (11%)
Query: 66 NAEAIELRGENSVDAEWM--AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDL 122
N E++ L G ++ + A++ LR+LN++ C+++T S+L + + L+ L+L
Sbjct: 59 NIESLNLSGCYNLTDNGLGHAFVQEISSLRALNLSLCKQITDSSLGRIAQYLKGLEVLEL 118
Query: 123 SRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLV 180
C +T+ G+ + + L+ L L +D GI L+ + + G L + L
Sbjct: 119 GGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLEQLT 176
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECLNLS 239
L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL LNL
Sbjct: 177 LQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSLNLR 229
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLT 298
+C D+I + + + L+G +SF D V + SL+ ++
Sbjct: 230 SC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA---YIA 269
Query: 299 Q-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEIL 356
Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L +
Sbjct: 270 QGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGI 329
Query: 357 SLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L G T+I + ++ +P LK +++
Sbjct: 330 DLYGCTRITKRGLERITQLPCLKVLNLG 357
>gi|229126744|ref|ZP_04255756.1| Internalin [Bacillus cereus BDRD-Cer4]
gi|228656684|gb|EEL12510.1| Internalin [Bacillus cereus BDRD-Cer4]
Length = 766
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 342 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 398
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 399 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 456
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRD 468
++D+S +S+L KL LS IRD
Sbjct: 457 ISDLS--PVSNLKKLVFLSFVANEIRD 481
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLT 472
L L ++D VLT
Sbjct: 374 KPLYTLPLKDLVLT 387
>gi|153940509|ref|YP_001391037.1| hypothetical protein CLI_1777 [Clostridium botulinum F str.
Langeland]
gi|384462076|ref|YP_005674671.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
gi|152936405|gb|ABS41903.1| leucine rich repeat protein [Clostridium botulinum F str.
Langeland]
gi|295319093|gb|ADF99470.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
Length = 1359
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 186/415 (44%), Gaps = 71/415 (17%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+ + +KELD G++++ + LEKL LS T + I+LL L NL +++
Sbjct: 352 SDLENIKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIKD--ISLLKYLTNLREVNI 406
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
++D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++
Sbjct: 407 SNTSISDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLN 462
Query: 232 SLECLNLSNC--TIDSILEGNENK---APLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
SL L+LSNC T ++ L N + L+ I + G +NE + L +L +
Sbjct: 463 SLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQG-NLLNEINNISIL--GKLEYLSI 519
Query: 287 SNSSLSRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVACV-GANLRN 330
+N+++ + L + L LD++ +IG++ V V +R
Sbjct: 520 ANTNVVKIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIRE 579
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L ++ I L ++ L LSG I D + + M +L ++D+SN +I
Sbjct: 580 L------INNYSEPIYKRQLLSITKLELSGRGIVD--LQGLESMENLIYLDLSNNEISNI 631
Query: 391 --IQQVGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
I+++ LVL S+ +++L LE L+L + D T L +L L L
Sbjct: 632 DSIKKLINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGDIT--ALGGLSQLTRLDL 689
Query: 443 -RNASLTDVSLHQL-----------------SSLSKLTNLSIRDAVLTNSGLGSF 479
RN ++ SL L SL KL NL R+ L NSG+ +F
Sbjct: 690 SRNGIVSINSLGGLINLQYLSLYENKISEREESLKKLYNL--RELYLKNSGISNF 742
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 199/428 (46%), Gaps = 68/428 (15%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+EL G VD + + + YL D S + ++ + LK+L L + K+
Sbjct: 598 KLELSGRGIVDLQGLESMENLIYL------DLSNNEISNIDSIKKLINLKKLVLHKN-KI 650
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+K + S++ LE+L LS L D I L L L+ LDL + + + SL L
Sbjct: 651 --GSIKVIESLTKLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSINSLGGLI 704
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTID 244
L+YL L+ +++S R ++ K++ L L L +G++ L ++LE + + + D
Sbjct: 705 NLQYLSLYENKISEREESLKKLY-NLRELYLKNSGISNFDVTLAYYNNLEKKDFTTNS-D 762
Query: 245 SILEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
I+ + + LAKI + G +E E ++ +D+S ++S+ +++
Sbjct: 763 FIVFDEKLDSDLAKIIREILGK---DENTNIYKSEIDTITDIDLSEDAISKLNISSKL-- 817
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILS 357
++++I D ++ + NL ++NL G G L G L L L
Sbjct: 818 -----TNTNIINLDGIQYFS----NLHSINL-------RGHGKLEGLENLMPLRGLIKLD 861
Query: 358 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
L G +++ ++ Y++ + SLK++ ++N ++ G L+ L+NL L L+
Sbjct: 862 LQGREVNYISLYYINYLTSLKYLYLNNMNLTG-------------DLSFLENLTDLRVLD 908
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 477
L +T +S+ ++ LS + L L L +TD LS L LTNL I+ ++ N+ +
Sbjct: 909 LSRTGISNISI--LSKLRNLNELYLGGNKITD-----LSYLENLTNL-IKLDLVGNNDIT 960
Query: 478 SFKPPRSL 485
S R+L
Sbjct: 961 SIYALRNL 968
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 133/569 (23%), Positives = 220/569 (38%), Gaps = 140/569 (24%)
Query: 36 RLPAHLADSLLRHLIRRRL------IFPSLLEVFK----HNA--------------EAIE 71
+P D + L+R+ + ++PS LE K HNA E +
Sbjct: 324 NIPIEFKDKVFEELVRKEINKPSGYVYPSDLENIKELDFHNAHIEKLNGIENMTALEKLN 383
Query: 72 LRGENSVDAEWMAYLGAFR-------------------YLRSLNVADCR----------- 101
L G + D + YL R Y+R LN+
Sbjct: 384 LSGTDIKDISLLKYLTNLREVNISNTSISDITALESSIYIRYLNLNKTEITTLEVIKKFE 443
Query: 102 -----RVTSSALWALTGMTCLKELDLSRC----------------------VKVTDAGMK 134
V+ + + + + L ELDLS C +K+ +
Sbjct: 444 HIEKLYVSGTKISTIPNLNSLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQGNLLN 503
Query: 135 HLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ +IS L KL +LS I +L SL NL LD+ G D QVL L +
Sbjct: 504 EINNISILGKLEYLSIANTNVVKIDVLRSLVNLRKLDITGCTKID-----TQVLNHLSDV 558
Query: 194 DLWGSQVSNRGAAVLK-------------MFPR----LSFLNLAWTGVTKLPNISSLE-- 234
++ G+++ G VL+ ++ R ++ L L+ G+ L + S+E
Sbjct: 559 EIIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLLSITKLELSGRGIVDLQGLESMENL 618
Query: 235 -CLNLSN---CTIDSILE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
L+LSN IDSI + N K L K + I E+ +E LD+SN+
Sbjct: 619 IYLDLSNNEISNIDSIKKLINLKKLVLHKNKIGSIKVI---ESLTKLEE-----LDLSNN 670
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAG 348
+ L + L LDLS + I V + + G NL+ L+L + S +
Sbjct: 671 LIGDITALGGLSQLTRLDLSRNGI----VSINSLGGLINLQYLSLYENKISEREESL--K 724
Query: 349 HLPNLEILSLSGTQIDDYAIS--YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
L NL L L + I ++ ++ Y + + F +N+D F +++ ++DL +
Sbjct: 725 KLYNLRELYLKNSGISNFDVTLAYYNNLEKKDF--TTNSDFIVFDEKL--DSDLAKIIRE 780
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLS---TFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
+ L E N+ ++++ T LS K I L N ++ ++L + S L +
Sbjct: 781 I--LGKDENTNIYKSEIDTITDIDLSEDAISKLNISSKLTNTNI--INLDGIQYFSNLHS 836
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+++R GL + P R L LDL G
Sbjct: 837 INLRGHGKL-EGLENLMPLRGLIKLDLQG 864
>gi|290994342|ref|XP_002679791.1| predicted protein [Naegleria gruberi]
gi|284093409|gb|EFC47047.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 21/274 (7%)
Query: 210 MFPRLSFLNLA--WTGVTKLPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTF 266
M L+ LN++ W G IS L+ L + + + I+ N + + +I+
Sbjct: 1 MKHNLTSLNISRNWIGEEGAKYISELDNLTILDIHGNDIVANGANHISKMKRITTLSVGL 60
Query: 267 IN-EREAFLYI-ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVA 322
N +E YI E L+ L+++N+++ F++ +K L L + + IGD + ++
Sbjct: 61 NNLGKEGTKYISEMKQLTNLEINNNNIQEEGAKFISGLKQLTELSIHFNNIGDVGTKHLS 120
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
+ L LN+ GV + + L L +S I Y+S M L+ +DI
Sbjct: 121 EL-KQLTRLNIGENNIGDEGVKHIL-EMKQLTDLDISNNNIRHKGSEYISGMNQLRILDI 178
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
++ +I +GA+ + + L LN+ Q D +S K+L L L
Sbjct: 179 NSCNI----DPIGAQ--------KISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLEL 226
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
N ++D+ +S +SKLTNL I + L++ G+
Sbjct: 227 FNCDISDIGAKCVSEMSKLTNLDIGENNLSDEGV 260
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ E Y+ + L +L + + + ++G+ L EL + + D G
Sbjct: 59 GLNNLGKEGTKYISEMKQLTNLEINN-NNIQEEGAKFISGLKQLTELSI-HFNNIGDVGT 116
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
KHL + L +L + E + +G+ + ++ L+ LD+ + + + +L L
Sbjct: 117 KHLSELKQLTRLNIGENNIGDEGVKHILEMKQLTDLDISNNNIRHKGSEYISGMNQLRIL 176
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSI 246
D+ + GA + +L+ LN+AW G + ++ L L L NC I I
Sbjct: 177 DINSCNIDPIGAQKISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLELFNCDISDI 234
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 135/334 (40%), Gaps = 61/334 (18%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
MKH L+ + + W+ E +G +S L NL++LD+ G D+V ++K++
Sbjct: 1 MKHNLTSLNISRNWIGE-----EGAKYISELDNLTILDIHG---NDIVANGANHISKMKR 52
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNEN 252
+ ++N G K ++++ +++LE N
Sbjct: 53 ITTLSVGLNNLGKEGTKY-------------ISEMKQLTNLEINN--------------- 84
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
I G FI+ + + + DV LS ++K L L++ +
Sbjct: 85 ----NNIQEEGAKFISGLKQLTELSIHFNNIGDVGTKHLS------ELKQLTRLNIGENN 134
Query: 313 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
IGD+ V+ + + L +L++SN G ++G + L IL ++ ID +S
Sbjct: 135 IGDEGVKHILEM-KQLTDLDISNNNIRHKGSEYISG-MNQLRILDINSCNIDPIGAQKIS 192
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
M L TD+ Q G E +S ++ L L L +SD +S
Sbjct: 193 EMKQL-------TDLNIAWNQFGDEGAKFIS-----DMKQLTTLELFNCDISDIGAKCVS 240
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+L +L + +L+D + +S++ KL LS+
Sbjct: 241 EMSKLTNLDIGENNLSDEGVRAVSNM-KLMILSV 273
>gi|290991352|ref|XP_002678299.1| predicted protein [Naegleria gruberi]
gi|284091911|gb|EFC45555.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 37/296 (12%)
Query: 164 QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
+N+ LD G T L R ++ K E L+ +V + A++ P L L++
Sbjct: 19 KNIIGLDFGN---TSLSYRDACLIAKFESLEELIGEVGDEMEALVDYLPNLKSLDVGLVQ 75
Query: 224 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
N+ + L N T SI N + L I E S L+
Sbjct: 76 EICYENVEYIS--ELQNLTTFSIRYSNIGRKHLQIIG----------------EMSQLTD 117
Query: 284 LDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L++S + ++ LT++ +L D S +GDD + + L+ LNLS+ +
Sbjct: 118 LNISGNPINSLLPIRPLTRITSLSAAD--CSFLGDDGIYPIVNFKG-LQKLNLSSNGITW 174
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G ++ PNL LSL+ T+I D AI +S M L ++D+ N ++ E
Sbjct: 175 EGCMFISEKFPNLSHLSLNETRICDGAIKRLSKMKQLTYLDVGNN------AKITMEGIK 228
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 456
++S NL +L LN+ V+D L +L L + + +TD +++ S
Sbjct: 229 LIS----NNLTNLTHLNISSNNVTDEGLMMACDLPKLQELFVGHNQITDSGINEFS 280
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 29/287 (10%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
LK LD+ ++ ++++ + L + + + + ++ + L+ L++ G P+
Sbjct: 66 LKSLDVGLVQEICYENVEYISELQNLTTFSIRYSNIGRKHLQIIGEMSQLTDLNISGNPI 125
Query: 177 TDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---------K 226
L+ +R L +T L D S + + G + F L LNL+ G+T K
Sbjct: 126 NSLLPIRPLTRITSLSAADC--SFLGDDGIYPIVNFKGLQKLNLSSNGITWEGCMFISEK 183
Query: 227 LPNISSLECLNLSNCTIDSILEGNENK-------APLAKISLAGTTFINEREAFLYIETS 279
PN+S L LN + +I ++ K AKI++ G I+ L T
Sbjct: 184 FPNLSHLS-LNETRICDGAIKRLSKMKQLTYLDVGNNAKITMEGIKLISNNLTNL---TH 239
Query: 280 L-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTR 337
L +S +V++ L C L + L+ L + + I D + E +G L+ L+LS
Sbjct: 240 LNISSNNVTDEGLMMACDLPK---LQELFVGHNQITDSGINEFSEKIGNKLKILSLSRNN 296
Query: 338 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM-MPSLKFIDIS 383
+S L L NL+ L L+G I D + + M L ++D+S
Sbjct: 297 ITSLCTQYLCTKLTNLKKLYLAGVSITDEDVKLICQCMKLLIYLDVS 343
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 32 RSLERLPAHLAD---SLLRHLIRRRLIFPSLL-EVFKHNAEAI-ELRG-------ENSVD 79
SLE L + D +L+ +L + + L+ E+ N E I EL+ +++
Sbjct: 43 ESLEELIGEVGDEMEALVDYLPNLKSLDVGLVQEICYENVEYISELQNLTTFSIRYSNIG 102
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
+ + +G L LN++ + + LT +T L D C + D G+ +++
Sbjct: 103 RKHLQIIGEMSQLTDLNISGNPINSLLPIRPLTRITSLSAAD---CSFLGDDGIYPIVNF 159
Query: 140 STLEKLWLSETGLTADGIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW-G 197
L+KL LS G+T +G +S NLS L L + D ++ L + +L YLD+
Sbjct: 160 KGLQKLNLSSNGITWEGCMFISEKFPNLSHLSLNETRICDGAIKRLSKMKQLTYLDVGNN 219
Query: 198 SQVSNRGAAVL-KMFPRLSFLNLAWTGVT 225
++++ G ++ L+ LN++ VT
Sbjct: 220 AKITMEGIKLISNNLTNLTHLNISSNNVT 248
>gi|345791735|ref|XP_543882.2| PREDICTED: F-box/LRR-repeat protein 14 [Canis lupus familiaris]
Length = 420
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 49/333 (14%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKL----WLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+L C +T+ G+ LL L++L S L+ GI L+ + + G L
Sbjct: 148 LELGGCSNITNTGL--LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLG 203
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLE 234
+ L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL
Sbjct: 204 LEQLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLR 256
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D V + SL+
Sbjct: 257 SLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA- 298
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 299 --YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 356
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 357 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 389
>gi|158297467|ref|XP_317696.4| AGAP007807-PA [Anopheles gambiae str. PEST]
gi|157015209|gb|EAA12920.4| AGAP007807-PA [Anopheles gambiae str. PEST]
Length = 422
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHL-LSISTLEKLW 146
+YL +L VA C + T S AL C L+ +DL C +TDA +++L L +LEKL
Sbjct: 259 QYLNTLEVAGCAQFTDSGFIAL-AKNCKYLERMDLEECSLITDATLQNLALGCPSLEKLT 317
Query: 147 LSETGLTAD-GIALLS----SLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQV 200
LS L D GI L+ + ++LSVL+L P +TD L L L+ ++L+ Q+
Sbjct: 318 LSHCELITDEGIRQLAGGGCAAESLSVLELDNCPLITDATLEHLISCHNLQRIELYDCQL 377
Query: 201 SNRGA 205
+R A
Sbjct: 378 ISRNA 382
>gi|357129987|ref|XP_003566640.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Brachypodium distachyon]
Length = 769
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 281 LSFLDVSNSSLS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 335
LSFLD+S +++S C LT++ +L DLS +++ S+ NL+ L LS+
Sbjct: 111 LSFLDLSRNTISGSIPPSICNLTKLTSL---DLSYNLLSQGSMTCTVGTLGNLKKLYLSH 167
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
++ + +L +LE L LS I + + SL+F+D+SN I G I +G
Sbjct: 168 NSLTTGLIPSDLVNLASLESLDLSNNHITGSISRSIGNLTSLEFLDLSNNQIMGSIGSIG 227
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
NL L L+L Q+ + L S L L+L + L + +L
Sbjct: 228 -------------NLTSLRYLDLSNNQIHCSILLTFSKLTSLETLALESNQLNGILPPEL 274
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKP 481
SL L++L++ +N +G+ P
Sbjct: 275 GSLVHLSHLNLS----SNQFVGTIPP 296
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 26/302 (8%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
S++ AL G L LDLS+ + + + L + L L LS L+ + + + +L N
Sbjct: 55 SSIGALAG---LSFLDLSKNYDL-NGSIPPLTGLPRLAHLDLSSNALSDEIPSSIGALAN 110
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLAWTGV 224
LS LDL ++ + S+ LTKL LDL + +S + L L L+ +
Sbjct: 111 LSFLDLSRNTISGSIPPSICNLTKLTSLDLSYNLLSQGSMTCTVGTLGNLKKLYLSHNSL 170
Query: 225 T------KLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIE 277
T L N++SLE L+LSN I SI N L + L+ + + +
Sbjct: 171 TTGLIPSDLVNLASLESLDLSNNHITGSISRSIGNLTSLEFLDLSNNQIMGSIGSIGNLT 230
Query: 278 TSLLSFLDVSNSSLSRFCFLT--QMKALEHLDLSSSMI-GDDSVEMVACVGANLRNLNLS 334
+ L +LD+SN+ + LT ++ +LE L L S+ + G E+ + V +L +LNLS
Sbjct: 231 S--LRYLDLSNNQIHCSILLTFSKLTSLETLALESNQLNGILPPELGSLV--HLSHLNLS 286
Query: 335 NTRFSSAGVGILA---GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
+ +F VG + GH +L L +S + + + L +D+S ++ G I
Sbjct: 287 SNQF----VGTIPPQIGHCRSLSSLLISNNLLTGQIPQELGYLGDLYELDLSRNNLSGAI 342
Query: 392 QQ 393
+
Sbjct: 343 PE 344
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E + +GA L L+++ ++ S ++ +T L LDLS + +
Sbjct: 95 NALSDEIPSSIGALANLSFLDLSR-NTISGSIPPSICNLTKLTSLDLSYNLLSQGSMTCT 153
Query: 136 LLSISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ ++ L+KL+LS LT I + L +L +L LDL +T + RS+ LT LE+LD
Sbjct: 154 VGTLGNLKKLYLSHNSLTTGLIPSDLVNLASLESLDLSNNHITGSISRSIGNLTSLEFLD 213
Query: 195 LWGSQV 200
L +Q+
Sbjct: 214 LSNNQI 219
>gi|430741732|ref|YP_007200861.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
gi|430013452|gb|AGA25166.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
Length = 304
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 294 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLP 351
F L L+ L + ++ D + + + LR + + ++AG+ L G HL
Sbjct: 94 FTALGMFDQLQELTMVVGVMTDTGLAQLGGL-PRLRQVYCFKPKVTNAGLAHLKGATHLV 152
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 411
+LE+L + +I D + +++ + +L+ +++S I G L
Sbjct: 153 SLELLRVP--EITDEGLVHLAGLTNLEKLNLSGARIAG------------------PGLP 192
Query: 412 HLERLNLEQTQV----SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
HL RL +T V +DA L L F L L L TD L +LS L LT L +
Sbjct: 193 HLARLGRLRTLVLGSTTDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLE 252
Query: 468 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 513
LT + L +L+ LDL GG +++ AI +F + P++ +
Sbjct: 253 AGDLTEAVLIHVAGLPNLERLDL-GGAPVSQAAIEKFKRARPQVRI 297
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A LG LR + + VT++ L L G T L L+L R ++TD G+ HL ++ L
Sbjct: 118 LAQLGGLPRLRQVYCFKPK-VTNAGLAHLKGATHLVSLELLRVPEITDEGLVHLAGLTNL 176
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
EKL LS + G+ L+ L L L LG TD L L T L+ L L + ++
Sbjct: 177 EKLNLSGARIAGPGLPHLARLGRLRTLVLG--STTDAGLAQLGRFTNLKQLYLGTGKYTD 234
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI-DSILEGNENKAPL 256
G A L L+ L L +T+ + + +LE L+L + + +E + P
Sbjct: 235 AGLAELSKLRSLTELGLEAGDLTEAVLIHVAGLPNLERLDLGGAPVSQAAIEKFKRARPQ 294
Query: 257 AKISLAGT 264
+I + G+
Sbjct: 295 VRILVNGS 302
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 91 YLRSLNVADCRRVTSS--ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
Y S+N A +V S A AL L+EL + V +TD G+ L + L +++
Sbjct: 75 YGGSINPATLPQVPISDEAFTALGMFDQLQELTMVVGV-MTDTGLAQLGGLPRLRQVYCF 133
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
+ +T G+A L +L L+L +P +TD L L LT LE L+L G++++ G
Sbjct: 134 KPKVTNAGLAHLKGATHLVSLELLRVPEITDEGLVHLAGLTNLEKLNLSGARIAGPGLPH 193
Query: 208 LKMFPRLSFLNLAWT---GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
L RL L L T G+ +L ++L+ L L G A LA++S
Sbjct: 194 LARLGRLRTLVLGSTTDAGLAQLGRFTNLKQLYLGT--------GKYTDAGLAELS 241
>gi|75759331|ref|ZP_00739428.1| Internalin protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228900010|ref|ZP_04064246.1| Internalin [Bacillus thuringiensis IBL 4222]
gi|74493163|gb|EAO56282.1| Internalin protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228859624|gb|EEN04048.1| Internalin [Bacillus thuringiensis IBL 4222]
Length = 766
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IRPLYSLP-LKDLVLTRNNVK--- 392
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIRDAVLTN 473
LSSL L L + +T+
Sbjct: 440 --PLSSLVNLQKLDLEANYITD 459
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 374 RPLYSLPLKDLVLTRNNV 391
>gi|374293090|ref|YP_005040125.1| hypothetical protein AZOLI_2723 [Azospirillum lipoferum 4B]
gi|357425029|emb|CBS87910.1| Conserved protein of unknown function; Leucine-rich repeat domain
[Azospirillum lipoferum 4B]
Length = 1026
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 156/371 (42%), Gaps = 80/371 (21%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L SL +C + S L L G+ L++LD C + + + L +S L++L S T
Sbjct: 17 LNSLQQLNCSGTSVSDLSPLNGLRGLQQLD---CSLTSVSDLSPLSGLSDLQQLSCSSTS 73
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
++ ++ LS L L LD V+DL L L+ L+ Q+S +V +F
Sbjct: 74 VSD--LSPLSGLSGLQQLDCSSTSVSDLF--PLSGLSGLQ-------QLSCSSTSVSDLF 122
Query: 212 P-----RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
P L L+ + T V+ L +S L L +C++ S+ + +PL+ +S
Sbjct: 123 PLSGLSGLQELSCSGTSVSDLSPLSGLNGLQQLDCSLTSV----SDLSPLSGLSG----- 173
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD-------DSVE 319
L L S +S+S L+ + L+ L S + + D ++
Sbjct: 174 --------------LQELSCSGTSVSDLSPLSGLSGLQELSCSGTSVSDLSPLSGLSGLQ 219
Query: 320 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 379
+ C G ++ +L+ L+G L L+ LS SGT ++D +S +S + L
Sbjct: 220 QLYCSGTSVSDLS------------PLSG-LSGLQQLSCSGTSVND--LSPLSGLSGL-- 262
Query: 380 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 439
QQ+ V L+ L L+ L+ L+ T VSD LFPLS L
Sbjct: 263 ------------QQLYCSVTSVSDLSPLSGLSGLQELSCSDTSVSD--LFPLSGLSSLQE 308
Query: 440 LSLRNASLTDV 450
L L N + +
Sbjct: 309 LYLYNVEIPGI 319
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLV 401
L +L+ L+ SGT + D +S ++ + L+ +D S T + +QQ+ + V
Sbjct: 17 LNSLQQLNCSGTSVSD--LSPLNGLRGLQQLDCSLTSVSDLSPLSGLSDLQQLSCSSTSV 74
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L+ L L+ L++L+ T VSD LFPLS L LS + S++D L LS LS L
Sbjct: 75 SDLSPLSGLSGLQQLDCSSTSVSD--LFPLSGLSGLQQLSCSSTSVSD--LFPLSGLSGL 130
Query: 462 TNLS 465
LS
Sbjct: 131 QELS 134
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
+D S +S+S L + +L+ L+ S + + D S + G L+ L+ S T S +
Sbjct: 1 MDCSLTSVSDLSPLNGLNSLQQLNCSGTSVSDLS-PLNGLRG--LQQLDCSLTSVSD--L 55
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
L+G L +L+ LS S T + D +S +S + L+ +D S+T +
Sbjct: 56 SPLSG-LSDLQQLSCSSTSVSD--LSPLSGLSGLQQLDCSSTSVS--------------D 98
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L L+ L++L+ T VSD LFPLS L LS S++D LS LS L
Sbjct: 99 LFPLSGLSGLQQLSCSSTSVSD--LFPLSGLSGLQELSCSGTSVSD-----LSPLSGLNG 151
Query: 464 LSIRDAVLTN 473
L D LT+
Sbjct: 152 LQQLDCSLTS 161
>gi|351713942|gb|EHB16861.1| F-box/LRR-repeat protein 14 [Heterocephalus glaber]
Length = 399
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 50/333 (15%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLLSISTLEKL----WLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L+L C +T+ G+ LL L++L S L+ GI L+ + + G L
Sbjct: 148 LELGGCSNITNTGL--LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLG 203
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLE 234
+ L L+ Q LT L SQ +RG ++ LSF ++ G+ L ++ SL
Sbjct: 204 LEQLTLQDCQKLTDL-------SQHISRGRWRGRLLN-LSFCGGISDAGLLHLSHMGSLR 255
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D V + SL+
Sbjct: 256 SLNLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA- 297
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 298 --YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS 355
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 356 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 388
>gi|119603706|gb|EAW83300.1| F-box and leucine-rich repeat protein 13, isoform CRA_c [Homo
sapiens]
Length = 806
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 140/309 (45%), Gaps = 51/309 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALLS----SLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG--------AAVLKM----FPRLS 215
TD L+ L + KL YLDL G +Q+S +G ++ + P L+
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 454
Query: 216 FLNLAWTGVTKLPNISSL---ECLNLSNCTIDSI---------LEGNENKAPLAKISLAG 263
N G+ K I+SL ++S+CT ++ EGN+ +++ A
Sbjct: 455 D-NCVKVGIEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNK------RVTDAS 507
Query: 264 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV- 321
FI++ Y S + D + S L+ +K L L+L++ + IGD ++
Sbjct: 508 FKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFL 563
Query: 322 -ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLK 378
+R LNLSN R S A V L+ PNL LSL + + I Y+ + SL
Sbjct: 564 DGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLV 623
Query: 379 FIDISNTDI 387
ID+S TDI
Sbjct: 624 SIDLSGTDI 632
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 495 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 554
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + L NL+ L L +T +
Sbjct: 555 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 614
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + L +DL G+ +SN G VL +L L+++
Sbjct: 615 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 652
>gi|434374368|ref|YP_006609012.1| internalin [Bacillus thuringiensis HD-789]
gi|401872925|gb|AFQ25092.1| internalin [Bacillus thuringiensis HD-789]
Length = 760
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IRPLYSLP-LKDLVLTRNNVK--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIRDAVLTN 473
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 368 RPLYSLPLKDLVLTRNNV 385
>gi|355785801|gb|EHH65984.1| F-box and leucine-rich repeat protein 14 [Macaca fascicularis]
Length = 330
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 3 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 59
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 60 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 117
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 118 QLTLQDCQKLTDLSLKHI------SRGLTGLRLLN-LSFCGGISDAGLLHLSHMGSLRSL 170
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 171 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 210
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 211 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 270
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 271 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 301
>gi|124002318|ref|ZP_01687171.1| leucine-rich protein [Microscilla marina ATCC 23134]
gi|123992147|gb|EAY31515.1| leucine-rich protein [Microscilla marina ATCC 23134]
Length = 1282
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTD-AGMKHLLSISTLEKLWLSET 150
LR+L D + L G+T L++L+L R KV+ + HL +++ L+ LSET
Sbjct: 436 LRTLEQLDLGGSQIETIENLEGLTGLQKLEL-RATKVSKIENLNHLPALTELD---LSET 491
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
+T I L+ L+ L L L +T + +L L+KLE L L S +S L
Sbjct: 492 AITK--IEGLTGLEGLKELSLSKNKITKI--ENLAGLSKLEKLSLCASNLSK--IENLTG 545
Query: 211 FPRLSFLNLAWTGVTKLPNI---SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
P+L L L + L N+ +L+ L+L+N I I + N LA+++L+ I
Sbjct: 546 LPKLRELCLEKNAIECLENLRGLPALKELDLNNNQITHI-QPNALPTQLAELNLSQNQLI 604
Query: 268 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 327
+ L+ LD+S +++S+ + ALE LDLS + I +E + + N
Sbjct: 605 KVEH---LAGVTGLTELDLSENNISKIENFEDLPALETLDLSYNKI--TRLENLTAL-PN 658
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
LR +N+ + + + L L+ L QI I + L +D+ N I
Sbjct: 659 LREVNIYQNQITEIATDAVTRQLQELD---LEQNQIS--TIEILVNFTGLSQVDVGNNQI 713
Query: 388 KGF 390
K F
Sbjct: 714 KWF 716
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 198/454 (43%), Gaps = 76/454 (16%)
Query: 106 SALWALTGMTCLKELDL--SRCVKVTDAGMKHLLSISTLEKLWLSETGLTA--------- 154
S + L +T LK L L +R K +++L +++ LEKLW++ TG+
Sbjct: 274 SKIEGLEKLTKLKMLGLMFNRVTK-----LENLDTLTELEKLWMNHTGIKKIENLDKLTK 328
Query: 155 ---------------------------------DGIALLSSLQNLSVLDLGGLPVTDLVL 181
I L +L NL+ L + G V +
Sbjct: 329 LTHLSLMCSKVTKIENLEALTQLTSLSLHATKISKIENLEALTNLTKLRVDGNKVAK--I 386
Query: 182 RSLQVLTKLEYLDLWG---SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 238
+L LT+L+ L L G S++ N G + +L LA T + L + +LE L+L
Sbjct: 387 ENLDNLTQLDDLMLGGNPISKIENLGHLI--KLRKLDLGGLAITKIENLEGLRTLEQLDL 444
Query: 239 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 298
I++I E E L K+ L T +++ E ++ L+ LD+S +++++ LT
Sbjct: 445 GGSQIETI-ENLEGLTGLQKLELRATK-VSKIENLNHLPA--LTELDLSETAITKIEGLT 500
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
++ L+ L LS + I +E +A + + L L+L + S + L G LP L L L
Sbjct: 501 GLEGLKELSLSKNKI--TKIENLAGL-SKLEKLSLCASNLSK--IENLTG-LPKLRELCL 554
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV---LSLTALQNLNHLER 415
I+ + + +P+LK +D++N I IQ T L LS L + HL
Sbjct: 555 EKNAIE--CLENLRGLPALKELDLNNNQIT-HIQPNALPTQLAELNLSQNQLIKVEHLAG 611
Query: 416 L-NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTN 473
+ L + +S+ + + F++L L + S ++ L L++L L ++I +T
Sbjct: 612 VTGLTELDLSENNISKIENFEDLPALETLDLSYNKITRLENLTALPNLREVNIYQNQITE 671
Query: 474 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
+ + R L+ LDL + T + ++ F +
Sbjct: 672 --IATDAVTRQLQELDLEQNQISTIEILVNFTGL 703
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 166/402 (41%), Gaps = 62/402 (15%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+L+ L D R + L G+T L LDL G+ +L + LE
Sbjct: 169 LNHLKHLQNLDLRENNIKKIENLAGLTALTRLDLGYNGFGKIEGLHNLPRLKQLE----- 223
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
L + I + +L +L L L L +L LT+L L L + +S
Sbjct: 224 ---LEENDIKKIENLHHLPQLKSLNLRFNSFEKLENLDALTELTELSLGYNGISKIEG-- 278
Query: 208 LKMFPRLSFLNLAWTGVTKLPN---ISSLECLNLSNCTIDSILEGNENKAPLAKIS---- 260
L+ +L L L + VTKL N ++ LE L +++ I I EN L K++
Sbjct: 279 LEKLTKLKMLGLMFNRVTKLENLDTLTELEKLWMNHTGIKKI----ENLDKLTKLTHLSL 334
Query: 261 -LAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKA-------LEHLD---- 307
+ T I EA + + L +S +L LT+++ +E+LD
Sbjct: 335 MCSKVTKIENLEALTQLTSLSLHATKISKIENLEALTNLTKLRVDGNKVAKIENLDNLTQ 394
Query: 308 LSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L M+G + + + +G LR L+L + + L G L LE L L G+QI+
Sbjct: 395 LDDLMLGGNPISKIENLGHLIKLRKLDLGGLAITK--IENLEG-LRTLEQLDLGGSQIE- 450
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL-NLEQTQVS 424
I + + L+ +++ T + + ++NLNHL L L+ ++ +
Sbjct: 451 -TIENLEGLTGLQKLELRATKV-----------------SKIENLNHLPALTELDLSETA 492
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+ L+ + L LSL +T + L+ LSKL LS+
Sbjct: 493 ITKIEGLTGLEGLKELSLSKNKITKIE--NLAGLSKLEKLSL 532
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 123/285 (43%), Gaps = 38/285 (13%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+L +L D + + LTG+ LKEL LS+ K+T +++L +S LEKL L
Sbjct: 477 LNHLPALTELDLSETAITKIEGLTGLEGLKELSLSKN-KITK--IENLAGLSKLEKLSLC 533
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+ L+ I L+ L L L L + L +L+ L L+ LDL +Q+++ L
Sbjct: 534 ASNLSK--IENLTGLPKLRELCLEKNAIE--CLENLRGLPALKELDLNNNQITHIQPNAL 589
Query: 209 KMFPRLSFLNLAWTGVTK---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG-- 263
+L+ LNL+ + K L ++ L L+LS I I E E+ L + L+
Sbjct: 590 PT--QLAELNLSQNQLIKVEHLAGVTGLTELDLSENNISKI-ENFEDLPALETLDLSYNK 646
Query: 264 -------TTFINEREAFLYIE----------TSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
T N RE +Y T L LD+ + +S L L +
Sbjct: 647 ITRLENLTALPNLREVNIYQNQITEIATDAVTRQLQELDLEQNQISTIEILVNFTGLSQV 706
Query: 307 DLSSSMIGDDSVEM--VACVGANLRNLNLSNTRFSSAGVGILAGH 349
D+ ++ I +E+ + C L +L L N + + V I G+
Sbjct: 707 DVGNNQIKWFPIELLDLPC----LTSLRLKNNPWQNIPVAITEGY 747
>gi|345310405|ref|XP_001520129.2| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Ornithorhynchus anatinus]
Length = 604
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALT--GMTCLKELDLSR-CVKVTDAGMKHLLSISTLE 143
GAF L L V + +AL A T G+ L L L R C+ AG + L
Sbjct: 353 GAFAGLARLAVVNLSGNCLAALPAQTFRGLAALHSLHLERACLGRVPAGA--FAGLVALR 410
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
+L L G+TA L L L LDL G +T L R+ + L +LEYL L G+Q+++
Sbjct: 411 RLSLGHNGITAIEEQGLHDLTGLLELDLTGNRLTHLPTRAFRDLARLEYLLLAGNQLADL 470
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKL-----PNISSLECLNLSNCTIDSILEGNENKAPLAK 258
L RLS+L+LA + + ++SL L+L N ++ + G + A L +
Sbjct: 471 APEALLPLRRLSWLDLAHNRLGAVAAGLFAPLASLRFLSLRNNSLRAFAPGLQAPAGLGQ 530
Query: 259 ISLAGTTF 266
+ LAG +
Sbjct: 531 LWLAGNRW 538
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 151/372 (40%), Gaps = 32/372 (8%)
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
LWL LTA A +L L L+L G + L ++ + L +L +L L +Q+
Sbjct: 76 LWLDGNNLTALPAAAFGNLSGLDFLNLQGSRLGQLEAQAFRGLARLAHLHLERNQLRGLA 135
Query: 205 AAVLKMFPRLSFLNLAWTGVTKL-----PNISSLECLNLSNCTI----DSILEGNENKAP 255
P L+ L+LA + +L + L LNL T+ D++ G +
Sbjct: 136 PGTFLHTPNLASLSLANNRLGQLEGAAFAGLCQLGELNLGWNTLAVLPDAVFRGLPH--- 192
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMI 313
L ++ LAG + + L+ L LD+S +SL + + L+ L L + +
Sbjct: 193 LRELVLAGNR-LAYLQPPLFAGLGELQELDLSTNSLRSVKAHVFAGLPRLQKLFLRGNQL 251
Query: 314 GDDSVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 372
+V A +G LR L+LS+ R + G LP+L +L LS I
Sbjct: 252 --SAVAPRAFLGLRALRWLDLSHNRLAVLFEDTFLG-LPSLHVLRLSANVITSLRPQAFR 308
Query: 373 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 432
+P L+ + +++ ++GA L+ A + L LE L L + + +
Sbjct: 309 DLPHLEELQLAHN-------RLGA-----LAAGAFEGLARLEVLALNDNHIREIGPGAFA 356
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL-H 491
L ++L L + L+ L +L + A L G+F +L+ L L H
Sbjct: 357 GLARLAVVNLSGNCLAALPAQTFRGLAALHSLHLERACLGRVPAGAFAGLVALRRLSLGH 416
Query: 492 GGWLLTEDAILQ 503
G E+ L
Sbjct: 417 NGITAIEEQGLH 428
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 18/277 (6%)
Query: 102 RVTSSALWALTGMTCLKELDLSR---CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
++++ A A G+ L+ LDLS V D L + +L L LS +T+
Sbjct: 250 QLSAVAPRAFLGLRALRWLDLSHNRLAVLFEDT----FLGLPSLHVLRLSANVITSLRPQ 305
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
L +L L L + L + + L +LE L L + + G RL+ +N
Sbjct: 306 AFRDLPHLEELQLAHNRLGALAAGAFEGLARLEVLALNDNHIREIGPGAFAGLARLAVVN 365
Query: 219 LAWTGVTKLP-----NISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREA 272
L+ + LP +++L L+L + + G L ++SL E
Sbjct: 366 LSGNCLAALPAQTFRGLAALHSLHLERACLGRVPAGAFAGLVALRRLSLGHNGITAIEEQ 425
Query: 273 FLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
L+ T LL LD++ + L+ + LE+L L+ + + D + E + + L
Sbjct: 426 GLHDLTGLLE-LDLTGNRLTHLPTRAFRDLARLEYLLLAGNQLADLAPEALLPL-RRLSW 483
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
L+L++ R + G+ A L +L LSL + +A
Sbjct: 484 LDLAHNRLGAVAAGLFA-PLASLRFLSLRNNSLRAFA 519
>gi|290999054|ref|XP_002682095.1| predicted protein [Naegleria gruberi]
gi|284095721|gb|EFC49351.1| predicted protein [Naegleria gruberi]
Length = 357
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 150/336 (44%), Gaps = 48/336 (14%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLW---LSETGLTADGIALLSSLQNL 166
L + LK L + CV G++ IS LEKL + + A+G ++S ++ L
Sbjct: 52 GLKSIGTLKHL-IHLCVDFNGIGLEGANYISQLEKLESLSIRYNYIGAEGAKVISEMKTL 110
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT---G 223
+ L++ + +++ + +L YLD+ ++V + +L +L+ L++ G
Sbjct: 111 TWLNVSSNRIGGEGAKAISQMKQLTYLDIGDNKVGDEEVILLSELDQLTALSIDRINPDG 170
Query: 224 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
+ + ++ L L+++NCT IL+ E + + +++L
Sbjct: 171 INAISKMNKLVSLSINNCT---ILDECEELSKMKQLTL---------------------- 205
Query: 284 LDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
LD+ ++ +S L+ + L HL++SS+ GDD + ++ + L L +++ + S
Sbjct: 206 LDIKSNGISAKGVKQLSGLSQLTHLNISSNAFGDDGAKSISEI-KQLTELFVNDCQISDD 264
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 401
G+ L G L L IL +S I D Y++ + L ++++N ++
Sbjct: 265 GMKSL-GDLNELTILDISNNYITDEGSLYLTKLEKLTALEVNNNELS------------Y 311
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 437
+ + N+N L L++ Q + S FK+L
Sbjct: 312 QGVKHMINMNQLTALSIRHNQFTFVQNEVFSQFKQL 347
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVA 322
+I A + E L++L+VS++ + ++QMK L +LD+ + +GD+ V +++
Sbjct: 94 NYIGAEGAKVISEMKTLTWLNVSSNRIGGEGAKAISQMKQLTYLDIGDNKVGDEEVILLS 153
Query: 323 CVGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 381
L L LS R + G+ ++ + L LS++ I D +S M L +D
Sbjct: 154 ----ELDQLTALSIDRINPDGINAIS-KMNKLVSLSINNCTILDEC-EELSKMKQLTLLD 207
Query: 382 ISNTDI--KGFIQQVGAE--TDLVLSLTA--------LQNLNHLERLNLEQTQVSDATLF 429
I + I KG Q G T L +S A + + L L + Q+SD +
Sbjct: 208 IKSNGISAKGVKQLSGLSQLTHLNISSNAFGDDGAKSISEIKQLTELFVNDCQISDDGMK 267
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
L EL L + N +TD L+ L KLT L + + L+ G+
Sbjct: 268 SLGDLNELTILDISNNYITDEGSLYLTKLEKLTALEVNNNELSYQGV 314
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 92 LRSLNVADCRR--VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
++ L + D + +++ + L+G++ L L++S D G K + I L +L++++
Sbjct: 200 MKQLTLLDIKSNGISAKGVKQLSGLSQLTHLNISSNA-FGDDGAKSISEIKQLTELFVND 258
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ DG+ L L L++LD+ +TD L L KL L++ +++S +G +
Sbjct: 259 CQISDDGMKSLGDLNELTILDISNNYITDEGSLYLTKLEKLTALEVNNNELSYQGVKHMI 318
Query: 210 MFPRLSFLNLAWTGVTKLPN 229
+L+ L++ T + N
Sbjct: 319 NMNQLTALSIRHNQFTFVQN 338
>gi|87306873|ref|ZP_01089019.1| hypothetical protein DSM3645_00430 [Blastopirellula marina DSM
3645]
gi|87290246|gb|EAQ82134.1| hypothetical protein DSM3645_00430 [Blastopirellula marina DSM
3645]
Length = 240
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 324 VGANLRN-LNLSNTRF----SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 378
VG N + + + TR+ + + I+ G LP+LE+L L G I A+ ++ +P L+
Sbjct: 68 VGRNSEDQIQVVATRYPLLLTDQELAIVDG-LPHLEVLDLRGAPITGQALVHLENLPKLR 126
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
+ + + I Q + T +L ++ L L L+L +T ++DA + PL+ +L
Sbjct: 127 ELYLGGSVITDVEQTLFRTTITDAALPSIAKLKTLRVLSLARTGITDAGIAPLAELPDLE 186
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 480
L L + +TD ++ L+ L L +L + + +T +G+ +
Sbjct: 187 DLFLVDVEVTDAAIEDLAKLKSLKHLYLHETPITAAGVKRLQ 228
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 92 LRSLNVADCR--RVTSSALWALTGMTCLKELDLSRCV-----------KVTDAGMKHLLS 138
L L V D R +T AL L + L+EL L V +TDA + +
Sbjct: 98 LPHLEVLDLRGAPITGQALVHLENLPKLRELYLGGSVITDVEQTLFRTTITDAALPSIAK 157
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ TL L L+ TG+T GIA L+ L +L L L + VTD + L L L++L L +
Sbjct: 158 LKTLRVLSLARTGITDAGIAPLAELPDLEDLFLVDVEVTDAAIEDLAKLKSLKHLYLHET 217
Query: 199 QVSNRGAAVLK 209
++ G L+
Sbjct: 218 PITAAGVKRLQ 228
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLN-----VADCRR------VTSSALWALTGMTC 116
E ++LRG + + + +L LR L + D + +T +AL ++ +
Sbjct: 102 EVLDLRG-APITGQALVHLENLPKLRELYLGGSVITDVEQTLFRTTITDAALPSIAKLKT 160
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L+ L L+R +TDAG+ L + LE L+L + +T I L+ L++L L L P+
Sbjct: 161 LRVLSLART-GITDAGIAPLAELPDLEDLFLVDVEVTDAAIEDLAKLKSLKHLYLHETPI 219
Query: 177 TDLVLRSLQVL 187
T ++ LQ L
Sbjct: 220 TAAGVKRLQRL 230
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
LT +A++ L +L VLDL G P+T L L+ L KL L L GS +++ V +
Sbjct: 87 LTDQELAIVDGLPHLEVLDLRGAPITGQALVHLENLPKLRELYLGGSVITD----VEQTL 142
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
R + + A + KL +L L+L+ I + APLA++
Sbjct: 143 FRTTITDAALPSIAKL---KTLRVLSLARTGI-----TDAGIAPLAELP----------- 183
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 313
+E L ++V+++++ L ++K+L+HL L + I
Sbjct: 184 ---DLEDLFLVDVEVTDAAIED---LAKLKSLKHLYLHETPI 219
>gi|222617799|gb|EEE53931.1| hypothetical protein OsJ_00513 [Oryza sativa Japonica Group]
Length = 931
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 155/390 (39%), Gaps = 50/390 (12%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G + E + +G + L SL ++ V + W +T +T L L SRC +T +
Sbjct: 281 GASQFSGELPSSIGWLKSLNSLEISGTTIVGTIPSW-ITNLTSLTILQFSRC-GLTGSIP 338
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEY 192
L ++ L KL L E + +S+ NLS L L V + L SL L L Y
Sbjct: 339 SFLGKLTKLRKLVLYECNFSGKLPQNISNFTNLSTLFLNSNNLVGTMKLASLWGLQHLRY 398
Query: 193 LDLWGSQ---VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI----SSLECLNLSNCTIDS 245
LD+ + V + + P+L L L+ +TK P+ L L+LS I
Sbjct: 399 LDISDNNLVVVDGKVDSSSTHIPKLQILALSGCNITKFPDFLRSQDELLWLDLSKNQIHG 458
Query: 246 ILEG----NENKAPLAKISLAGTTFI-------------------NEREAFLYIETSLLS 282
+ + N + +A + LA F N E + I
Sbjct: 459 AIPSWAWESWNDSGVASLILAHNKFTSVGSNPFIPLQIDWLDLSNNMFEGTIPIPQGSAR 518
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA--CVGANLRNLNLSNTRFSS 340
LD SN+ S F L H+ L ++ + S E+ C L+ L+LSN FS
Sbjct: 519 LLDYSNNMFSSIPF-NFTAHLSHVTLFNAPGNNFSGEIPPSFCTATELQYLDLSNNNFSG 577
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
+ L ++ ++IL+L+ Q+D + S + S I+G L
Sbjct: 578 SIPSCLIENVNGIQILNLNANQLDGEIPDTIKEGCSFHALYFSGNRIEG---------QL 628
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFP 430
SL A QN LE L+ Q++D +FP
Sbjct: 629 PRSLLACQN---LEILDAGNNQIND--IFP 653
>gi|326435264|gb|EGD80834.1| TKL protein kinase [Salpingoeca sp. ATCC 50818]
Length = 1626
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 300 MKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
+ LEHLD++ + + +++A +GA++R+LNL++T +SA + +A P+LE+L +
Sbjct: 588 LAQLEHLDMAYVRLPPARLHDVLASIGASIRHLNLTSTAVTSAMLEQVAAAWPDLEVLDI 647
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 418
S T +D ++ + P L+ +D+S T I + L+ +L A N+ L
Sbjct: 648 SNTAVD--SLLPLRHTPKLRVLDVSFTRITTLEPITTGQLPLLTTLRA-ANVTRL----- 699
Query: 419 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 478
T + A P + L HL++ LT +S + + S L +L N GL
Sbjct: 700 --THLGGAGALP--SLPHLQHLTISGTGLTRISDNAFAGASNLVSLEFS----FNDGLRH 751
Query: 479 FKP 481
P
Sbjct: 752 VSP 754
>gi|290996081|ref|XP_002680611.1| predicted protein [Naegleria gruberi]
gi|284094232|gb|EFC47867.1| predicted protein [Naegleria gruberi]
Length = 412
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 126/264 (47%), Gaps = 22/264 (8%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E Y+ + L SLN++ ++ ++ M L L + + + + D G K++ +
Sbjct: 165 EGAKYISEMKQLTSLNIS-YNAISDEGAKFISEMKQLMSLHIYKNL-IGDEGAKYIREMK 222
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L +S ++ +G +S ++ L+ LD+ ++ + + + +L LD+ +++
Sbjct: 223 QLTSLNISYNSISDEGAKFISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEI 282
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
+ G L +L+ L ++ +T IS EG + + + +++
Sbjct: 283 GDEGVKYLSEMKQLTSLTISGNEITYCNQISE---------------EGAKFISEMKQLT 327
Query: 261 LAGTTF--INEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDD 316
++ I++ A E L+ L++S +S+S F+++MK L LD+ S+ IGD+
Sbjct: 328 SLDISYNLISDEGAKYISEMKQLTSLNISYNSISGEGAKFISEMKQLTSLDIVSNRIGDE 387
Query: 317 SVEMVACVGANLRNLNLSNTRFSS 340
+ ++ + L +LN+S+ +F+S
Sbjct: 388 GAKYISEM-KQLTSLNISDNQFNS 410
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 147/365 (40%), Gaps = 88/365 (24%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+T M L LD+S ++ D G K++ + L L +S+ + +G +S ++ L+ L+
Sbjct: 122 ITEMKQLTSLDISEN-QIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLTSLN 180
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 230
+ ++D + + + +L L ++ + + + GA ++ +L+ LN+++
Sbjct: 181 ISYNAISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISYNS------- 233
Query: 231 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL-LSFLDVSNS 289
IS G FI+E + TSL + F ++S
Sbjct: 234 ----------------------------ISDEGAKFISEMKQL----TSLDIVFNEISGE 261
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
F+++MK L LD+S + IGD+ V+ ++
Sbjct: 262 GAK---FISEMKQLTSLDISDNEIGDEGVKYLS--------------------------E 292
Query: 350 LPNLEILSLSGT------QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
+ L L++SG QI + ++S M L +DIS I GA+
Sbjct: 293 MKQLTSLTISGNEITYCNQISEEGAKFISEMKQLTSLDIS----YNLISDEGAK------ 342
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
+ + L LN+ +S +S K+L L + + + D +S + +LT+
Sbjct: 343 --YISEMKQLTSLNISYNSISGEGAKFISEMKQLTSLDIVSNRIGDEGAKYISEMKQLTS 400
Query: 464 LSIRD 468
L+I D
Sbjct: 401 LNISD 405
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F+T+MK L LD+S + IGD+ + ++ + L +L++S+ G ++ + L
Sbjct: 121 FITEMKQLTSLDISENQIGDEGAKYISEM-RQLTSLDISDIEIGDEGAKYIS-EMKQLTS 178
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L++S I D ++S M L + I K I GA+ ++ + L
Sbjct: 179 LNISYNAISDEGAKFISEMKQLMSLHI----YKNLIGDEGAK--------YIREMKQLTS 226
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LN+ +SD +S K+L L + ++ +S + +LT+L I D + + G
Sbjct: 227 LNISYNSISDEGAKFISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEG 286
Query: 476 LGSFKPPRSLKLLDLHGGWL 495
+ + L L + G +
Sbjct: 287 VKYLSEMKQLTSLTISGNEI 306
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 140/341 (41%), Gaps = 54/341 (15%)
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
++ ++ L+ LD+ + D + + + +L LD+ ++ + GA + +L+ LN
Sbjct: 121 FITEMKQLTSLDISENQIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLTSLN 180
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
+++ IS G FI+E + +
Sbjct: 181 ISYNA-----------------------------------ISDEGAKFISEMKQLM---- 201
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
SL + ++ +++ + +MK L L++S + I D+ + ++ + L +L++
Sbjct: 202 SLHIYKNLIGDEGAKY--IREMKQLTSLNISYNSISDEGAKFISEM-KQLTSLDIVFNEI 258
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
S G ++ + L L +S +I D + Y+S M L + IS +I + Q+ E
Sbjct: 259 SGEGAKFIS-EMKQLTSLDISDNEIGDEGVKYLSEMKQLTSLTISGNEIT-YCNQISEEG 316
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+S + L L++ +SD +S K+L L++ S++ +S +
Sbjct: 317 AKFIS-----EMKQLTSLDISYNLISDEGAKYISEMKQLTSLNISYNSISGEGAKFISEM 371
Query: 459 SKLTNLSIRDAVLTNSG---LGSFKPPRSLKLLD--LHGGW 494
+LT+L I + + G + K SL + D + W
Sbjct: 372 KQLTSLDIVSNRIGDEGAKYISEMKQLTSLNISDNQFNSNW 412
>gi|320102882|ref|YP_004178473.1| hypothetical protein Isop_1339 [Isosphaera pallida ATCC 43644]
gi|319750164|gb|ADV61924.1| hypothetical protein Isop_1339 [Isosphaera pallida ATCC 43644]
Length = 185
Score = 55.5 bits (132), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L +L L+ +TDA + + S+S+L KL+L ETG+T G+A L +L +L L G V
Sbjct: 62 LTKLVLNNNKSLTDAALDPIPSMSSLRKLYLVETGITDTGLAKLKDHPSLEILSLVGTNV 121
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
TD + SLQ + L+ L + G+ +S+ LK
Sbjct: 122 TDAAVPSLQAMPALKELFVAGTPISDEALRALK 154
Score = 43.9 bits (102), Expect = 0.27, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
++LR L L T + G+ L H P+LEILSL GT + D A+ + MP+LK + ++ T
Sbjct: 85 SSLRKLYLVETGITDTGLAKLKDH-PSLEILSLVGTNVTDAAVPSLQAMPALKELFVAGT 143
Query: 386 DI 387
I
Sbjct: 144 PI 145
>gi|224124626|ref|XP_002330070.1| predicted protein [Populus trichocarpa]
gi|222871495|gb|EEF08626.1| predicted protein [Populus trichocarpa]
Length = 1126
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 160/363 (44%), Gaps = 66/363 (18%)
Query: 139 ISTLEKLWLSETGLTADGIALLSS-LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S L+ L LS+ LT G+ +LSS LQ L L L G D + S+ + L+ LDL
Sbjct: 135 FSALKSLDLSDNQLTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSY 194
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE-NKAPL 256
++++ G VL + + KL N+ L GN+ N +
Sbjct: 195 NELTGSGLKVLS------------SRLQKLENLH---------------LSGNQCNDSIF 227
Query: 257 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 316
+ I+ F +++ LS+ +V+ S L +++K LE+LDLS + +D
Sbjct: 228 SSIT-----------GFSSLKSLDLSYNEVTGSGLKVLS--SKLKKLENLDLSDNQC-ND 273
Query: 317 SVEMVACVGANLRNLNLSNTRFSSAGVGI-----LAGHLPNLEILSLSGTQIDDYAISYM 371
S+ ++L+ LNLS + + + GI L L NLE L L ++++ +S +
Sbjct: 274 SIFSSLSGFSSLKYLNLSQNQLTGSSTGINSFQVLVSGLRNLEELHLYSNKLNNNILSSL 333
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
S +LK +D+S+ G T L L +LE L L T ++ L +
Sbjct: 334 SGFSTLKSLDLSDNMFTG--------------STGLNGLRNLETLYLGNTDFKESIL--I 377
Query: 432 STFKELIHLSLRNASLTDVSL--HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
+ L L +AS ++ + L + S L + + D+ L S L + P +LK+L
Sbjct: 378 ESLGALPSLKTLDASYSNFTHFGKGLCNSSSLEEVFLDDSSLPASFLRNIGPLSTLKVLS 437
Query: 490 LHG 492
L G
Sbjct: 438 LAG 440
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 37/233 (15%)
Query: 272 AFLYIET--SLLSFLDVSNSSLSRF---CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
AF + T S L LD+S++ L+ ++++ LE+L LS + D + +
Sbjct: 127 AFFHASTGFSALKSLDLSDNQLTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGF-S 185
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
+L++L+LS + +G+ +L+ L LE L LSG Q +D S ++ SLK +D+S +
Sbjct: 186 SLKSLDLSYNELTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYNE 245
Query: 387 IKGFIQQVGAETDLVLSLTALQNLN------------------HLERLNLEQTQVSDATL 428
+ G +V L L L+NL+ L+ LNL Q Q++ ++
Sbjct: 246 VTGSGLKV-----LSSKLKKLENLDLSDNQCNDSIFSSLSGFSSLKYLNLSQNQLTGSST 300
Query: 429 FPLSTFKELI-------HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
+++F+ L+ L L + L + L LS S L +L + D + T S
Sbjct: 301 -GINSFQVLVSGLRNLEELHLYSNKLNNNILSSLSGFSTLKSLDLSDNMFTGS 352
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 176/421 (41%), Gaps = 60/421 (14%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCV 126
E + L G D+ + + G F L+SL+++ +T S L L+ + L+ L LS
Sbjct: 164 ENLHLSGNQCNDSIFSSITG-FSSLKSLDLS-YNELTGSGLKVLSSRLQKLENLHLSG-N 220
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS-LQNLSVLDLGGLPVTDLV----- 180
+ D+ + S+L+ L LS +T G+ +LSS L+ L LDL D +
Sbjct: 221 QCNDSIFSSITGFSSLKSLDLSYNEVTGSGLKVLSSKLKKLENLDLSDNQCNDSIFSSLS 280
Query: 181 ---------------------LRSLQVLT----KLEYLDLWGSQVSNRGAAVLKMFPRLS 215
+ S QVL LE L L+ ++++N + L F L
Sbjct: 281 GFSSLKYLNLSQNQLTGSSTGINSFQVLVSGLRNLEELHLYSNKLNNNILSSLSGFSTLK 340
Query: 216 FLNLA---WTGVTKLPNISSLECLNLSNCTI-DSILEGNENKAP-LAKISLAGTTFINER 270
L+L+ +TG T L + +LE L L N +SIL + P L + + + F +
Sbjct: 341 SLDLSDNMFTGSTGLNGLRNLETLYLGNTDFKESILIESLGALPSLKTLDASYSNFTHFG 400
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
+ + FLD S+ S + + L+ L L+ C NL
Sbjct: 401 KGLCNSSSLEEVFLDDSSLPASFLRNIGPLSTLKVLSLAGVDFNSTLPAQGWCELKNLEE 460
Query: 331 LNLSNTRFSSAGVGILA---GHLPNLEILSLSGTQID-DYAISYMSMMPSLKFIDISNTD 386
L LS G+L G+L L+IL LS Q++ + A SY+S + L+ + I N
Sbjct: 461 LYLSGNNLK----GVLPPCLGNLSFLQILDLSHNQLEGNIAFSYLSHLKQLRSLSIKNNY 516
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK-ELIHLSLRNA 445
+ + +S + NL++L+ + + ++ A F S K +L+ S N
Sbjct: 517 FQ-----------VPISFGSFMNLSNLKLIACDNNELIAAPSFQPSAPKFQLLFFSASNC 565
Query: 446 S 446
+
Sbjct: 566 T 566
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 30/290 (10%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLS-ISTLEKLWLSETGLTADGIALLSSLQNLSV 168
A TG + LK LDLS ++T +G+K L S + LE L LS + ++ +L
Sbjct: 131 ASTGFSALKSLDLSD-NQLTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKS 189
Query: 169 LDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-- 225
LDL +T L+ L L KLE L L G+Q ++ + + F L L+L++ VT
Sbjct: 190 LDLSYNELTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYNEVTGS 249
Query: 226 KLPNISS----LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 281
L +SS LE L+LS+ + + + + K ++N + L ++ +
Sbjct: 250 GLKVLSSKLKKLENLDLSDNQCNDSIFSSLSGFSSLK-------YLNLSQNQLTGSSTGI 302
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
+ V ++ ++ LE L L S+ + ++ + ++ + L++L+LS+ F+
Sbjct: 303 NSFQV---------LVSGLRNLEELHLYSNKLNNNILSSLSGF-STLKSLDLSDNMFT-- 350
Query: 342 GVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGF 390
G L G L NLE L L T + I + +PSLK +D S ++ F
Sbjct: 351 GSTGLNG-LRNLETLYLGNTDFKESILIESLGALPSLKTLDASYSNFTHF 399
>gi|290985429|ref|XP_002675428.1| predicted protein [Naegleria gruberi]
gi|284089024|gb|EFC42684.1| predicted protein [Naegleria gruberi]
Length = 451
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 132/286 (46%), Gaps = 45/286 (15%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKEL----DLSRC-VKV 128
G+N +D E Y+ + L SL++ S + G C++E+ L+ C ++
Sbjct: 188 GKNEID-EGAKYISEMKQLASLDI-------SYTQVDVEGAKCIREMRQLTSLNICGNRI 239
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
G+K + + L L + E+ + +G L+S ++ L+ L++ + D + + +
Sbjct: 240 GIEGVKLISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMK 299
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLPNISSLECLNLSNCTI 243
+L L++ +++ N+GA + +L LN++ GV + + L LN+ +
Sbjct: 300 QLISLNIRANRIVNQGAKFISEMRQLRSLNISNNRIGIEGVKLISEMKQLISLNIRS--- 356
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMK 301
+IS GT I+E L+ L++SN+ + +++MK
Sbjct: 357 -------------NRISNEGTKLISEMRQ--------LTLLNISNNEIGDEETKLISEMK 395
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
L+ LD+S + IG + ++++ + L +LN+++ R G +++
Sbjct: 396 QLKSLDISYNQIGIEGAKLISEM-KQLTSLNIADNRIGGEGAKLIS 440
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 152/340 (44%), Gaps = 48/340 (14%)
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
+S ++ L+ L + G + D + + + +L LD+ + + + GA L +L LN
Sbjct: 127 FISKMKQLTSLSISGNGIGDEEAKLISEMKQLTSLDISANLIGDEGAKYLSEMKQLISLN 186
Query: 219 LAWT----GVTKLPNISSLECLNLSNCTIDSILEGNE---NKAPLAKISLAGTTFINERE 271
+ G + + L L++S +D +EG + L +++ G I
Sbjct: 187 IGKNEIDEGAKYISEMKQLASLDISYTQVD--VEGAKCIREMRQLTSLNICGNR-IGIEG 243
Query: 272 AFLYIETSLLSFLDVSNS--SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA------- 322
L E L+ L++ S + +++MK L L++S+++IGD+ ++++
Sbjct: 244 VKLISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLIS 303
Query: 323 -CVGAN---------------LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 366
+ AN LR+LN+SN R GV +++ + L L++ +I +
Sbjct: 304 LNIRANRIVNQGAKFISEMRQLRSLNISNNRIGIEGVKLIS-EMKQLISLNIRSNRISNE 362
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
+S M L ++ISN +I ET L+ + L++L+ ++ Q + A
Sbjct: 363 GTKLISEMRQLTLLNISNNEIG------DEETKLISEMKQLKSLD----ISYNQIGIEGA 412
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L +S K+L L++ + + +S + +LT++++
Sbjct: 413 KL--ISEMKQLTSLNIADNRIGGEGAKLISEMKQLTSITL 450
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F+++MK L L +S + IGD+ ++++ + L +L++S G L+ + L
Sbjct: 127 FISKMKQLTSLSISGNGIGDEEAKLISEM-KQLTSLDISANLIGDEGAKYLS-EMKQLIS 184
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKGF--IQQVGAETDL--------VLS 403
L++ +ID+ A Y+S M L +DIS T D++G I+++ T L +
Sbjct: 185 LNIGKNEIDEGA-KYISEMKQLASLDISYTQVDVEGAKCIREMRQLTSLNICGNRIGIEG 243
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
+ + + L LN+ ++ + +S K+L L++ N + D +S + +L +
Sbjct: 244 VKLISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLIS 303
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L+IR + N G R L+ L++
Sbjct: 304 LNIRANRIVNQGAKFISEMRQLRSLNI 330
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNL 353
++++MK L LD+S + + VE C+ L +LN+ R GV +++ + L
Sbjct: 198 YISEMKQLASLDISYTQV---DVEGAKCIREMRQLTSLNICGNRIGIEGVKLIS-EMRQL 253
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN---- 409
L++ + I +S M L ++ISN I ++ +E ++SL N
Sbjct: 254 TSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLISLNIRANRIVN 313
Query: 410 --------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
+ L LN+ ++ + +S K+LI L++R+ +++ +S + +L
Sbjct: 314 QGAKFISEMRQLRSLNISNNRIGIEGVKLISEMKQLISLNIRSNRISNEGTKLISEMRQL 373
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
T L+I + + + + LK LD+ + E A L
Sbjct: 374 TLLNISNNEIGDEETKLISEMKQLKSLDISYNQIGIEGAKL 414
>gi|254411888|ref|ZP_05025664.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181610|gb|EDX76598.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 415
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 63/367 (17%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
R S L L+ +T L+ L L ++TD + L ++ L+ L L +T I L
Sbjct: 81 NRQEISDLSPLSELTNLESLHLDGN-QITD--ICPLTELTNLKYLTLRRNQIT--DICPL 135
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLNL 219
+ L NL+ L L G + D+ SL LT LE+L+L +Q++ A L+ RL +
Sbjct: 136 TELTNLTELSLEGNQIADV--NSLAELTNLEFLNLENNQITTISPLAELQNLKRLHLEDN 193
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
T ++ L + +L L+L + I I +PL++ F N + FL +
Sbjct: 194 QITDISSLAGLQNLTWLHLEDNQITDI-------SPLSE-------FTNLKGLFLVL--- 236
Query: 280 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
+ + L+Q+ L+ L+L + I D + +A + NL L+L + + +
Sbjct: 237 ---------NQIKDISPLSQLTNLKALELKFNQIQD--ISPLAEL-QNLTWLDLEDNQIT 284
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ L+G L NL LSL+ QI D +S +S + +LK + ++ I+
Sbjct: 285 D--ISPLSG-LTNLTFLSLTYNQIQD--VSPLSGLTNLKRLQLNFNQIQ----------- 328
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
++ L L +LE L+L Q++D + PLS + L LSL +TD+ S LS
Sbjct: 329 ---DISPLAELTNLETLSLNGNQITDVS--PLSGLQNLNALSLNGNQITDI-----SPLS 378
Query: 460 KLTNLSI 466
LTNL +
Sbjct: 379 GLTNLKV 385
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDL 400
L NLE L L G QI D I ++ + +LK++ + I + ++ E +
Sbjct: 93 ELTNLESLHLDGNQITD--ICPLTELTNLKYLTLRRNQITDICPLTELTNLTELSLEGNQ 150
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+ + +L L +LE LNLE Q++ T+ PL+ + L L L + +TD+S L+ L
Sbjct: 151 IADVNSLAELTNLEFLNLENNQIT--TISPLAELQNLKRLHLEDNQITDIS--SLAGLQN 206
Query: 461 LTNLSIRDAVLTN-SGLGSF 479
LT L + D +T+ S L F
Sbjct: 207 LTWLHLEDNQITDISPLSEF 226
>gi|148381055|ref|YP_001255596.1| capsular polysaccharide biosynthesis protein [Clostridium botulinum
A str. ATCC 3502]
gi|153931337|ref|YP_001385426.1| internalin [Clostridium botulinum A str. ATCC 19397]
gi|153937191|ref|YP_001388833.1| internalin [Clostridium botulinum A str. Hall]
gi|387819365|ref|YP_005679712.1| putative Internalin A/LRR surface protein [Clostridium botulinum
H04402 065]
gi|148290539|emb|CAL84667.1| putative capsular polysaccharide biosynthesis leucine rich repeat
protein [Clostridium botulinum A str. ATCC 3502]
gi|152927381|gb|ABS32881.1| leucine-rich repeat protein [Clostridium botulinum A str. ATCC
19397]
gi|152933105|gb|ABS38604.1| leucine-rich repeat protein [Clostridium botulinum A str. Hall]
gi|322807409|emb|CBZ04983.1| putative Internalin A/LRR surface protein [Clostridium botulinum
H04402 065]
Length = 364
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 131/269 (48%), Gaps = 40/269 (14%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT---A 154
++ +V A+ G L+++ + + ++ G+++L I L L L E LT
Sbjct: 58 SNLEKVIRLAIRKPIGKLRLRDVVDIKKLDASNKGIQNLDGIENL--LRLQELDLTDNEI 115
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
D I+ LSSL+++S+L LG +TD+ SL+ +KL+ L L+ ++V + LK F ++
Sbjct: 116 DDISALSSLKDISILKLGKNKITDIA--SLKNCSKLKELYLFDNKVID--ITPLKNFEKI 171
Query: 215 SFLNLAWTGVTK---LPNISSLECLNL-SNCTIDSILEGNENKAPLAKISLAGTTF---- 266
L+L V LP + +L+ + L +N ID E L ++LAG F
Sbjct: 172 YILDLNRNHVADISILPTLKNLKEIYLHNNGVID--FEPILRMQQLTTVNLAGNNFTDMK 229
Query: 267 -INEREAF--LYI------------ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
IN+ ++ LYI S L LDVSN+ ++ ++ + +E L++SS+
Sbjct: 230 DINQLKSLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNISSN 289
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSS 340
I D + N +NL+ + R+++
Sbjct: 290 NIRD------IKILENFKNLSKVDLRYNN 312
>gi|423654209|ref|ZP_17629508.1| hypothetical protein IKG_01197 [Bacillus cereus VD200]
gi|401296676|gb|EJS02293.1| hypothetical protein IKG_01197 [Bacillus cereus VD200]
Length = 760
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
L LSSL L L +
Sbjct: 434 L--LSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|357141277|ref|XP_003572165.1| PREDICTED: receptor-like protein kinase HSL1-like [Brachypodium
distachyon]
Length = 978
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 191/447 (42%), Gaps = 46/447 (10%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLK 118
L+ KH + L G NS E GA F L +LN+A ++ L ++ L+
Sbjct: 115 LQSLKH----LNLAG-NSFTGEIPRSFGAGFPSLSTLNLAG-NDISGEFPAFLANVSALE 168
Query: 119 ELDLS----RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
EL L+ V DA + H + L LWL+ GL + A + +L+ L LDL
Sbjct: 169 ELLLAYNPFTPSPVPDA-IAH--GLPRLRVLWLAGCGLVGNIPASIGNLKRLVNLDLSTN 225
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-KLPN---- 229
+T + S+ L + ++L+ +++S R A L +L FL++A ++ ++P
Sbjct: 226 NLTGEIPESIGGLESVVQIELYSNKLSGRVPAGLGKLKKLRFLDVAMNRLSGEIPPDLLL 285
Query: 230 ISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
LE L+L + + +AP L + L + E + + L F+D+S+
Sbjct: 286 APGLESLHLYENELSGRVPSTLGQAPALNDLRLFSNRLVGELPPE-FGKNCPLEFIDLSD 344
Query: 289 SSLS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
+ +S C +++ L L L++ + G E+ C L + L N R S V
Sbjct: 345 NRISGRIPATLCSAGKLEQL--LILNNELDGPIPAELGEC--RTLTRVRLPNNRLSGP-V 399
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
+ LP+L +L L+G + +++ +L + +S+ G +
Sbjct: 400 PLDMWSLPHLYLLELAGNALSGTVGPGIALAQNLSQLLLSDNHFAGVLPA---------E 450
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L +L NL L N + ATL LST L + LRN S++ + KLT
Sbjct: 451 LGSLTNLVELSAANNGFSGPLPATLADLST---LGRIDLRNNSISGELPQGVRRWQKLTQ 507
Query: 464 LSIRDAVLTNS---GLGSFKPPRSLKL 487
L + D LT S GLG SL L
Sbjct: 508 LDLADNRLTGSIPPGLGELPVLNSLDL 534
>gi|229172068|ref|ZP_04299633.1| Internalin [Bacillus cereus MM3]
gi|228611411|gb|EEK68668.1| Internalin [Bacillus cereus MM3]
Length = 758
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
+ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVNMDNLASLDLSNNKITNVAPLVEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 392
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 440 PLSNLVNLQKL 450
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 56/193 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ ++ F +K L HL L G++ ++ V NL +L+LSN + +
Sbjct: 250 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEFSDVTPLVNMDNLASLDLSNNKIT 305
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 399
+ + + N++ L LSG QI+D
Sbjct: 306 NVAPLV---EMKNVKSLYLSGNQIED---------------------------------- 328
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 ----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDIK 374
Query: 460 KLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 375 PLYSLPLKDLVLT 387
>gi|228907061|ref|ZP_04070925.1| Internalin [Bacillus thuringiensis IBL 200]
gi|228852565|gb|EEM97355.1| Internalin [Bacillus thuringiensis IBL 200]
Length = 766
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-KQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 392
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 131/281 (46%), Gaps = 24/281 (8%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRY---LRSLNV 97
+ D+ LR L+ +++ L E ++++ E + Y A +Y L+SL V
Sbjct: 197 ITDNKLRELVNKKVFNRKDLNTPITKEELLQVKDLFLNTNEILDY-SALKYMPNLKSLTV 255
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
A+ + + + +A + L L L R + +D + L+ ++ LE L LS +T +
Sbjct: 256 ANAK-IKDPSFFA--NLKQLNHLAL-RGNEFSD--VTPLVKMNNLESLDLSNNKIT--NV 307
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
A L+ ++N+ L L G + D+ +L + +L+YL+L +++ N A L +++L
Sbjct: 308 APLTEMKNVKTLYLSGNQIEDVT--ALAKMKQLDYLNLANNKIKN--VAPLSALKNVTYL 363
Query: 218 NLAWTGVTKLPNISSLECLNL---SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
LA + + + SL +L N D L G + L K+ G I ++
Sbjct: 364 TLAGNQIEDIKPLYSLPLKDLVLTRNNVKD--LSGIDQMNQLNKL-FVGKNQI--KDVTP 418
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
+ + L+ LD+ N+ L L+ + L+ LDL ++ I D
Sbjct: 419 LAKMTQLTELDLPNNELKDITPLSSLVNLQKLDLEANYISD 459
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMKQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 374 KPLYSLPLKDLVLTRNNV 391
>gi|46447627|ref|YP_008992.1| hypothetical protein pc1993, partial [Candidatus Protochlamydia
amoebophila UWE25]
gi|46401268|emb|CAF24717.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 129
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ ++L N DA +A+L L L +++C +T + L LT + L++L+LS C K
Sbjct: 2 QHLDLWCTNITDA-GLAHLKPLVTLTHLRLSECDNLTDAGLAHLTPLVALQQLNLSGCKK 60
Query: 128 VTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG 173
+TDAG+ HL S+ L++L LS LT G+A L+ L L L+L G
Sbjct: 61 LTDAGLAHLTSLVALQQLNLSGCKKLTDAGLAHLTPLVALQHLELTG 107
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L G + +A+L + L+ LN++ C+++T + L LT + L+ L+L+ C
Sbjct: 51 QQLNLSGCKKLTDAGLAHLTSLVALQQLNLSGCKKLTDAGLAHLTPLVALQHLELTGCYN 110
Query: 128 VTDAGMKHLLSIST 141
TDAG++ +++T
Sbjct: 111 FTDAGLERFKTLAT 124
>gi|356506506|ref|XP_003522022.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 669
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 202/479 (42%), Gaps = 78/479 (16%)
Query: 87 GAFRY-LRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSISTLE 143
GA+ LR ++++ RR T++ L +L G C L ELDLS ++ DAG+ + L
Sbjct: 99 GAYAATLRRMDLSRSRRFTATGLLSL-GARCEHLVELDLSNATELRDAGVAAVARARNLR 157
Query: 144 KLWLSETGLTAD-GIALLS---------------------------SLQNLSVLDLGGLP 175
KLWL+ + D GI ++ + L+ LDL LP
Sbjct: 158 KLWLARCKMVTDMGIGCIAVGCRKLRLLCLKWCVGIGDLGVDLVAIKCKELTTLDLSYLP 217
Query: 176 VTDLVLRSLQVLTKLEYLDLWGS----------QVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+T+ L S+ L LE L L G + +G LK N++ G++
Sbjct: 218 ITEKCLPSIFKLQHLEDLVLEGCFGIDDDSLDVDLLKQGCKTLKRLDISGCQNISHVGLS 277
Query: 226 KLPNIS-SLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINE------REAFLYI 276
KL +IS LE L L++ + S+ +G + L I L G +E
Sbjct: 278 KLTSISGGLEKLILADGSPVTLSLADGLNKLSMLQSIVLDGCPVTSEGLRAIGNLCISLR 337
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSN 335
E SL L V++ +LS +++ K L LD++ I D S+ +A L +L + +
Sbjct: 338 ELSLSKCLGVTDEALSF--LVSKHKDLRKLDITCCRKITDVSIASIANSCTGLTSLKMES 395
Query: 336 TRFSSAGVGILAGHLPN-LEILSLSGTQIDD---YAISYMSMMPSLKFIDISNTDIKGFI 391
+ +L G + LE L L+ +IDD +IS S + SLK N +G +
Sbjct: 396 CTLVPSEAFVLIGQKCHYLEELDLTDNEIDDEGLMSISSCSWLTSLKIGICLNITDRG-L 454
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNL-EQTQVSDATLFPLSTFK---ELIHLSLRNASL 447
VG + L+ L+L T V D + ++ E+I+ S S+
Sbjct: 455 AYVGMRC------------SKLKELDLYRSTGVDDLGISAIAGGCPGLEMINTSY-CTSI 501
Query: 448 TDVSLHQLSSLSKLTNLSIRDAVLTNS-GLGSFK-PPRSLKLLDLHGGWLLTEDAILQF 504
TD +L LS S L L IR +L S GL + R L LD+ + + + ++
Sbjct: 502 TDRALIALSKCSNLETLEIRGCLLVTSIGLAAIAMNCRQLSRLDIKKCYNIDDSGMIAL 560
>gi|255030546|ref|ZP_05302497.1| hypothetical protein LmonL_18171 [Listeria monocytogenes LO28]
Length = 400
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 152/359 (42%), Gaps = 64/359 (17%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + L L++L ++D +T+ + A+T + LK L L C +T G L ++
Sbjct: 72 EDLGTLNNLPKLQTLVLSDNENLTN--ITAITDLPQLKTLTLDGC-GITSIGT--LDNLP 126
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
LEKL L E +T S+ ++ LP +L YLD+ + +
Sbjct: 127 KLEKLDLKENQIT-------------SISEITDLP-------------RLSYLDVSVNNL 160
Query: 201 SNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
+ G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P
Sbjct: 161 TTIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSL 216
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
K A I++ + L +D SN+ ++ + L+ LD+ S+ I S
Sbjct: 217 KEFYAQNNSISDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTS 274
Query: 318 V--------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
V ++ +G NL +L N F+ G LPNLE L +S
Sbjct: 275 VIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDN 334
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 335 NSYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRN 385
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 169/401 (42%), Gaps = 57/401 (14%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
+L L G T L+ +D S C + G + +S LE + LS + I L +L NL
Sbjct: 5 SLETLNGATKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKNLPNL 61
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 226
+ + DL +L L KL+ L L ++ A+ + P+L L L G+T
Sbjct: 62 VNITADSCAIEDL--GTLNNLPKLQTLVLSDNENLTNITAITDL-PQLKTLTLDGCGITS 118
Query: 227 ---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
L N+ LE L+L I SI E + LS+
Sbjct: 119 IGTLDNLPKLEKLDLKENQITSISE--------------------------ITDLPRLSY 152
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LDVS ++L+ L ++ LE L++SS+ + D V + + L +N+SN + G
Sbjct: 153 LDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSD--VSTLTNFPS-LNYINISNNVIRTVGK 209
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVG 395
LP+L+ I D IS + MP+L+ +D SN T+I F +Q +
Sbjct: 210 ---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLD 264
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQ 454
++ + S + + +L LE N + +++ + T L L+ N S + SL
Sbjct: 265 VHSNRITSTSVIHDLPSLETFNAQTNLITN-----IGTMDNLPDLTYVNLSFNRIPSLAP 319
Query: 455 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
+ L L L + D LG+ L++LDL +L
Sbjct: 320 IGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYL 360
>gi|434404320|ref|YP_007147205.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428258575|gb|AFZ24525.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 864
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 192/401 (47%), Gaps = 53/401 (13%)
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
D + L FR LR LN+ L L M L+ L L R V++ D + L S
Sbjct: 339 DVTRLDELLQFRSLRHLNLDGT---PLKDLKTLAQMNWLESLSL-RQVQIKD--ISPLTS 392
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWG 197
+++L+ L +S +G+ L L +L L L + +TDL + S Q L +L L+
Sbjct: 393 LNSLKNLAISRKPF--EGLQPLGELTSLESLSLDRMQITDLAPIISCQSLKRLS-LNYTP 449
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS---SLECLNLSNCTIDSILEGNENKA 254
+ N A + P L L+L T VT ++ SLE L++S+ I+ I
Sbjct: 450 LETVNDIAKI----PSLQHLSLDSTKVTNFQPLALLPSLEYLSISDNQIEDI-------T 498
Query: 255 PLAKISLAGTTF---INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
PL+ I+ IN + + L L V +SS+S FL + L+ L+LS +
Sbjct: 499 PLSSITGLKDLIAERINLEDWSPLQQMQNLEKLSVQDSSVSDISFLAPISKLQILNLSGT 558
Query: 312 MIGDDSV--EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ D S ++V LR L+L NT + + +L G L +L+ L L + + D+ S
Sbjct: 559 RVVDVSPLQQLV-----ELRELSLFNTEVN--DIRVLVG-LNHLKTLYLDSSAVRDF--S 608
Query: 370 YMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+S +P+++ + +S++ I ++++ + V ++AL+ L +LE+LNL++T
Sbjct: 609 PLSHLPTIESLSLSSSSIIDLSWLPNLTNLKELCLDYTEVADISALETLPNLEKLNLKKT 668
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTD----VSLHQLSSL 458
+ + + L+T +LI L+L + + D +SLH + L
Sbjct: 669 DIQNFS--KLTTLSKLISLNLHSCEVEDLSWLISLHDIQEL 707
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 185/395 (46%), Gaps = 70/395 (17%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+A L + YL +++D + + L ++TG LK+L R + + D L + L
Sbjct: 478 LALLPSLEYL---SISDNQIEDITPLSSITG---LKDLIAER-INLEDWS--PLQQMQNL 528
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
EKL + ++ ++ I+ L+ + L +L+L G V D+ LQ L +L L L+ ++V++
Sbjct: 529 EKLSVQDSSVS--DISFLAPISKLQILNLSGTRVVDV--SPLQQLVELRELSLFNTEVND 584
Query: 203 --------------RGAAVLKMFPRLSFLNLAWTGVTK---------LPNISSLE--CLN 237
++ ++ F LS L + LPN+++L+ CL+
Sbjct: 585 IRVLVGLNHLKTLYLDSSAVRDFSPLSHLPTIESLSLSSSSIIDLSWLPNLTNLKELCLD 644
Query: 238 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSNSSLSRFCF 296
+ S LE N L K++L T N F + T S L L++ + + +
Sbjct: 645 YTEVADISALETLPN---LEKLNLKKTDIQN----FSKLTTLSKLISLNLHSCEVEDLSW 697
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L + ++ L LS + I D + ++A + A L+ L+LS T S + HL E+L
Sbjct: 698 LISLHDIQELILSRTGIQD--INLLAAL-AYLKVLDLSETEVESINALADSAHL---EVL 751
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+S T++ +I ++ +L+ ++++ T ++ L+ L+N LE L
Sbjct: 752 DISETKVQ--SIEALTNARALRSLNLNLTSVEN--------------LSPLKNSLQLEEL 795
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
++ +T VSD ++ L+ FK L L +RN S+ D S
Sbjct: 796 SIWRTPVSDLSV--LNNFKHLKKLDIRNTSVEDFS 828
>gi|219821270|gb|ACL37758.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLT 237
Query: 398 --TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L + N++ +E L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L++A ++ L +S L L
Sbjct: 210 -TLASLTNLTSLDVANNQISNLAPLSGLTKL 239
>gi|290993851|ref|XP_002679546.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284093163|gb|EFC46802.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 385
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 161/376 (42%), Gaps = 69/376 (18%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS-NRGAAVLKMF----P 212
++L +++ L L + + + + ++S+ + +L LD+ G + +GA+ L F
Sbjct: 28 SILMNMKKLKTLSIAYIGMDEEDIKSICNMRQLTDLDVTGCSIGKGQGASTLVTFIDQLQ 87
Query: 213 RLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 270
+L+ L ++W G+ IS L+ L + + +I L GT I+E
Sbjct: 88 QLTRLVISWNRIGIEGAKAISQLKQLT---------------ELEINQIGLEGTKIISEL 132
Query: 271 EAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVE--------- 319
L+ L+++N+ + + ++++MK L LD+ ++ +G + V+
Sbjct: 133 NQ--------LTSLNIANNKMGKQGAKYISEMKQLTKLDIGTNQLGVEGVQYIRKLDKLT 184
Query: 320 -------MVACVGA-------NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
++ GA L LN+S G ++ LPNL IL+LS I
Sbjct: 185 ALSVFNNVIGFRGAMLLRKMTQLTELNISTNAIGDVGAKFVS-DLPNLAILNLSFNSISY 243
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
++S +P L ++++ D+ G E + + + L L+L+ T++ +
Sbjct: 244 VGAQFISKLPKLTELNMNQNDL-------GNE-----GVKFISGIISLTNLSLQTTRIDE 291
Query: 426 -ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 484
F K+L L L ++ D L +L KLT+LS+ + G + ++
Sbjct: 292 HGVKFISEKLKQLRILKLCENNIGDAGAKFLITLEKLTDLSLYSNNIGYEGAKAISTMKA 351
Query: 485 LKLLDLHGGWLLTEDA 500
L L +HG + E A
Sbjct: 352 LTHLRIHGNPIGIEGA 367
>gi|219821285|gb|ACL37768.1| internalin A [Listeria monocytogenes]
gi|219821315|gb|ACL37788.1| internalin A [Listeria monocytogenes]
gi|219821321|gb|ACL37792.1| internalin A [Listeria monocytogenes]
gi|219821327|gb|ACL37796.1| internalin A [Listeria monocytogenes]
gi|219821345|gb|ACL37808.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLT 237
Query: 398 --TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L + N++ +E L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L++A ++ L +S L L
Sbjct: 210 -TLASLTNLTSLDVANNQISNLAPLSGLTKL 239
>gi|110755367|ref|XP_001120678.1| PREDICTED: toll-like receptor 13-like isoform 1 [Apis mellifera]
gi|328787378|ref|XP_003250935.1| PREDICTED: toll-like receptor 13-like isoform 2 [Apis mellifera]
Length = 671
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 190/453 (41%), Gaps = 31/453 (6%)
Query: 61 EVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADC--RRVTSSALWALTGMTCLK 118
E F+ + I L +N+ E + R L L++ C R + + T L
Sbjct: 123 ETFRDSPGLITLELQNNPLEEVKGHFLKCRTLLYLDLNSCGIRHLNTQFFHNTTN---LN 179
Query: 119 ELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
+LDLS ++ HL + LE L L+ LT + L+NL L++ +
Sbjct: 180 KLDLSHNPLGQIKPGPFDHL---ANLEYLKLNACNLTHISSIAFAHLENLRELEMAENDL 236
Query: 177 TDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----W---TGVTKLP 228
L S L L +LEYL++ + ++N L L LA W G T
Sbjct: 237 RTLSWTSVLAPLVRLEYLNIRKTGITNLPGDAFAQNLYLRQLVLADNELWHLDVGNTLGH 296
Query: 229 NISSLECLNLSNCTIDSIL--EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
N+ SL+ L+LSNC + L E +N + L ++L+G + L L +
Sbjct: 297 NLHSLQSLDLSNCNLQDRLSEEAFKNASKLRVLNLSGNPMFAADLTVVLRHLPKLHKLSL 356
Query: 287 SNSSLSRFCFLTQM-KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
SN SL R + K LE LD+S + + + V ++ + + L L++S G
Sbjct: 357 SNCSLQRLPNAFHIFKHLEELDISHNPLTNAFVSLLNPLES-LEYLDMSYCNLGYVGNNT 415
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 405
A H+ L+ L LSG ++ + + L+ ++++N D+K I L +
Sbjct: 416 FA-HMTFLKKLILSGNKLHTLEEGLFANLTRLESLELNNCDLKTPIDPKVFGDRLTTDII 474
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
L+ L +LE D L P + L L L N +LT ++ + ++ LT L+
Sbjct: 475 ELK----LSGNSLEVPD--DGPLLP-TQLSNLEILDLSNCNLTHLNENLFTTTKNLTQLN 527
Query: 466 IRDAVLTNS-GLGSFKPPRSLKLLDLHGGWLLT 497
+ ++ + L K R L+ LDL L T
Sbjct: 528 LSSNTISGTENLACLKKLRMLEHLDLSNNSLST 560
>gi|218184060|gb|EEC66487.1| hypothetical protein OsI_32581 [Oryza sativa Indica Group]
Length = 1210
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 181/387 (46%), Gaps = 53/387 (13%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
++T L+ +T +++L L + +VT + K + + L+ L L L + L
Sbjct: 223 NKLTGEIPACLSNLTKVEKLYLYQN-QVTGSIPKEIGMLPNLQLLSLGNNTLNGEIPTTL 281
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
S+L NL+ L L G ++ + + L +LTK++YL+L +++++ A L +++ L L
Sbjct: 282 SNLTNLATLYLWGNELSGPIPQKLCMLTKIQYLELNSNKLTSEIPACLSNLTKMNELYLD 341
Query: 221 WTGVT-KLPN----ISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINEREAFL 274
+T +P +++L+ L LSN T+ I N LA + L G
Sbjct: 342 QNQITGSIPKEIGMLANLQVLQLSNNTLSGEIPTALANLTNLATLKLYGN---------- 391
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLN 332
++S + C LT+M+ L LS + + + E+ AC+ + L
Sbjct: 392 ----------ELSGPIPQKLCTLTKMQL---LSLSKNKL---TGEIPACLSNLTKVEKLY 435
Query: 333 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI- 391
L + + + + G LPNL++L L ++ + +S + +L + + + ++ G I
Sbjct: 436 LYQNQVTGS-IPKEIGMLPNLQLLGLGNNTLNGEIPTTLSNLTNLDTLSLWDNELSGHIP 494
Query: 392 QQVGAETDL-VLSLTA----------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
Q++ T + LSL++ L NL +E+L L Q QV+ + + L L
Sbjct: 495 QKLCTLTKMQYLSLSSNKLTGEIPACLSNLTKMEKLYLYQNQVTGSIPKEIGMLPNLQVL 554
Query: 441 SLRNASLT-DVSLHQLSSLSKLTNLSI 466
L N +L+ ++S ++LS LTNL+I
Sbjct: 555 QLSNNTLSGEIS----TALSNLTNLAI 577
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 151/350 (43%), Gaps = 29/350 (8%)
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + ++ L+ L LS L + L++L NL+ L L G ++ + + L LTK++YL
Sbjct: 159 KEIGMLANLQSLNLSNNTLIGEIPITLANLTNLATLQLYGNELSGPIPQKLCTLTKMQYL 218
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--------LPNISSLECLNLSNCTIDS 245
L ++++ A L ++ L L VT LPN L+ L+L N T++
Sbjct: 219 SLSSNKLTGEIPACLSNLTKVEKLYLYQNQVTGSIPKEIGMLPN---LQLLSLGNNTLNG 275
Query: 246 ILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKA 302
+ N LA + L G L + T + +L+++++ L+ L+ +
Sbjct: 276 EIPTTLSNLTNLATLYLWGNELSGPIPQKLCMLTK-IQYLELNSNKLTSEIPACLSNLTK 334
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
+ L L + I + + + ANL+ L LSN S LA +L NL L L G +
Sbjct: 335 MNELYLDQNQITGSIPKEIGML-ANLQVLQLSNNTLSGEIPTALA-NLTNLATLKLYGNE 392
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
+ + + ++ + +S + G I L NL +E+L L Q Q
Sbjct: 393 LSGPIPQKLCTLTKMQLLSLSKNKLTGEIP------------ACLSNLTKVEKLYLYQNQ 440
Query: 423 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
V+ + + L L L N +L LS+L+ L LS+ D L+
Sbjct: 441 VTGSIPKEIGMLPNLQLLGLGNNTLNGEIPTTLSNLTNLDTLSLWDNELS 490
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 36/307 (11%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
++T L+ +T +++L L + +VT + K + + L+ L LS L+ + L
Sbjct: 511 NKLTGEIPACLSNLTKMEKLYLYQN-QVTGSIPKEIGMLPNLQVLQLSNNTLSGEISTAL 569
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
S+L NL++L L G ++ + + L +LTK++YLDL ++++++ A PR F NL
Sbjct: 570 SNLTNLAILSLWGNELSGPIPQKLCMLTKIQYLDLSSNKLTSKIPAC--SLPR-EFENLT 626
Query: 221 WTGVTKLPNISSLECLNLSNCTIDSI----LEGNENKAPLAKISLAGTTFINEREAFLYI 276
L N S L + C + + GN P+ + SL T + + + +
Sbjct: 627 GIADLWLDNNSFSGHLPANVCMGGRLKTFMIGGNAFDGPIPR-SLKTCTSLVKLSVYNNL 685
Query: 277 ETSLLS-----FLDVSNSSLSRFCFLTQMKA-------LEHLDLSSSMIGDDSVEMVACV 324
T +S + + + SLS F Q+ LE +D +MI
Sbjct: 686 LTGDISEHFGVYPHLKSVSLSYNRFFGQISPNWVASPQLEEMDFHKNMI----------- 734
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
L L+ +N S + G+L +L ++LS Q+ Y + + + +L ++D+S
Sbjct: 735 -TGLLRLDHNNI---SGEIPAEFGNLKSLYKINLSFNQLSGYLPAQLGKLSNLGYLDVSR 790
Query: 385 TDIKGFI 391
++ G I
Sbjct: 791 NNLSGPI 797
>gi|119603712|gb|EAW83306.1| F-box and leucine-rich repeat protein 13, isoform CRA_i [Homo
sapiens]
Length = 690
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 204
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 205 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 259
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 318
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 319 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 374
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 375 PSLKFIDISNTDI 387
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLL---SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + L +DL G+ +SN G VL +L L+++
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
>gi|161333854|ref|NP_001104508.1| F-box/LRR-repeat protein 13 isoform 2 [Homo sapiens]
Length = 690
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 117 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 204
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 205 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 259
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 318
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 319 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 374
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 375 PSLKFIDISNTDI 387
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLL---SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + L +DL G+ +SN G VL +L L+++
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
>gi|332868064|ref|XP_001158024.2| PREDICTED: F-box/LRR-repeat protein 13 [Pan troglodytes]
gi|397466179|ref|XP_003804845.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Pan paniscus]
Length = 690
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 135/311 (43%), Gaps = 55/311 (17%)
Query: 117 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 171
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 172 GGLPVTDLVLRSLQV---LTKLEYLDLWGSQ---------VSNRGAAVLKM----FPRLS 215
TD L+ L + KL YLDL G +SN ++ + P L+
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMHLTINDMPTLT 364
Query: 216 -------------FLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISL 261
+L +TG P+IS LS C + I EGN+ +++
Sbjct: 365 DNCVKALVEKCSRITSLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RVTD 415
Query: 262 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEM 320
A FI++ Y S + D + S L+ +K L L+L++ + IGD ++
Sbjct: 416 ASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQ 471
Query: 321 V--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPS 376
+R LNLSN R S A V L+ PNL LSL + + I Y+ + S
Sbjct: 472 FLDGPASIKIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFS 531
Query: 377 LKFIDISNTDI 387
L ID+S TDI
Sbjct: 532 LVSIDLSGTDI 542
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLL----SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVL 181
D G+K L SI + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASIK-IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGI 523
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + L +DL G+ +SN G VL +L L+++
Sbjct: 524 GYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
>gi|322790910|gb|EFZ15576.1| hypothetical protein SINV_11426 [Solenopsis invicta]
Length = 526
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 23/169 (13%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L++ DC+R++ AL ++ G T LK ++LS CV +TD+G+KHL +S+L +L L
Sbjct: 347 LEHLSLQDCQRLSDEALRHVSLGFTTLKSINLSFCVCITDSGVKHLARMSSLRELNLRSC 406
Query: 148 ---SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVS 201
S+ G+ A+G + ++SL ++S D + D L + Q L L+ L L Q+S
Sbjct: 407 DNISDIGMAYLAEGGSRITSL-DVSFCD----KIGDQALVHISQGLFNLKSLSLSACQIS 461
Query: 202 NRG-AAVLKMFPRLSFLNLAWTGV-------TKLPNISSLECLNLSNCT 242
+ G + K L LN+ T ++ +L+C++L CT
Sbjct: 462 DEGICKIAKTLHDLETLNIGQCSRLTDRGLHTVAESMKNLKCIDLYGCT 510
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 75/303 (24%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L L + C +T++ L + G+ LK LDL C V+D G+ HL ++
Sbjct: 285 LKNLEHLELGGCCNITNTGLLLIAWGLKKLKRLDLRSCWHVSDIGIAHLAGLNR------ 338
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
TADG +L++LS+ D L +D LR + + G
Sbjct: 339 ----ETADGNL---ALEHLSLQDCQRL--SDEALRHVSL-----------------GFTT 372
Query: 208 LKMFPRLSF-LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
LK LSF + + +GV L +SSL LNL +C IS G +
Sbjct: 373 LKSI-NLSFCVCITDSGVKHLARMSSLRELNLRSCD---------------NISDIGMAY 416
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH----------LDLSSSMIGDD 316
+ E S ++ LDVS FC +AL H L LS+ I D+
Sbjct: 417 LAE-------GGSRITSLDVS------FCDKIGDQALVHISQGLFNLKSLSLSACQISDE 463
Query: 317 SVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMM 374
+ +A +L LN+ +R + G+ +A + NL+ + L G T+I + + +
Sbjct: 464 GICKIAKTLHDLETLNIGQCSRLTDRGLHTVAESMKNLKCIDLYGCTKITTSGLERIMKL 523
Query: 375 PSL 377
P L
Sbjct: 524 PQL 526
>gi|13905232|gb|AAH06913.1| Fbx14l protein, partial [Mus musculus]
Length = 327
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 18 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 74
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 75 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 132
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 133 QLTLQDCQKLTDLSLKHI------SRGLTGLRLLN-LSFCGGISDAGLLHLSHMGSLRSL 185
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 186 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 225
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 226 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 285
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G T+I + ++ +P LK +++
Sbjct: 286 TGIDLYGCTRITKRGLERITQLPCLKVLNLG 316
>gi|242071073|ref|XP_002450813.1| hypothetical protein SORBIDRAFT_05g018970 [Sorghum bicolor]
gi|241936656|gb|EES09801.1| hypothetical protein SORBIDRAFT_05g018970 [Sorghum bicolor]
Length = 621
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 172/439 (39%), Gaps = 110/439 (25%)
Query: 159 LLSSLQNLSVLDLGGLPVT-----------------------DLVLRS-----LQVLTKL 190
L S+ +L LDL +P + D +LRS L L L
Sbjct: 129 FLGSMNSLKYLDLSDVPFSGRVPSQLGNLSNLQYLHLSSSTQDSLLRSTDLSWLTHLHFL 188
Query: 191 EYLDLWGSQVSNRG--AAVLKMFPRLSFLNLAWTGVTK----LP--NISSLECLNLS--- 239
+YL L+G +S G A + M P L L L + +T LP N+++LE L+LS
Sbjct: 189 QYLRLYGVNLSAVGDWALAVNMIPSLKVLELCYCSLTNAEQSLPRLNLTNLEKLDLSGNL 248
Query: 240 ------NCTIDSI-------LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
+C +I LE + PL ++L G ++ + L I +S+ SFL+
Sbjct: 249 LGHPIASCWFWNITHLKHLDLESTDLYGPL-PLALGGMKYLED----LRISSSISSFLN- 302
Query: 287 SNSSLSRFCFLTQMK---ALEHLDLSSSMIGDDS---VEMVACVGANLRNLNLSNTRFSS 340
+ F+T ++ +LE L + ++ G+ + + C L+ LNL + S
Sbjct: 303 ------KCIFITSLRNLCSLETLCIRYTLCGEITEILESLPRCSPNRLQELNLESNNIS- 355
Query: 341 AGVGILAGHLPN-------LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 393
G LPN LE L L G I ++M + SL ++D+S +I G +
Sbjct: 356 -------GTLPNQMWPLTSLESLDLYGNNIGGTLPNWMGQLTSLGYLDLSQNNISGMLPD 408
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
+L+ L LE L L ++ + F L +L L LT
Sbjct: 409 ------------SLRMLTGLEYLALTYNNITGPLPSFVGEFTGLSYLDLSYNRLTGQVPR 456
Query: 454 QLSSLSKLTNLSIR----DAVLTNSGLGSFKPPRSLKL------LDLHGGW---LLTEDA 500
++ L L NL + D +T S K R L L +++ W + A
Sbjct: 457 EIGMLRNLENLDLTSNNLDGTITEEHFASLKSLRWLDLSYNSLKIEISSEWQPPFRLQQA 516
Query: 501 ILQFCKMHPRIEVWHELSV 519
C+M P W +L V
Sbjct: 517 DFASCRMGPAFPSWLKLMV 535
>gi|157118403|ref|XP_001659098.1| F-Box protein, putative [Aedes aegypti]
gi|108875753|gb|EAT39978.1| AAEL008262-PA, partial [Aedes aegypti]
Length = 381
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 25/170 (14%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL ++ LE+L L
Sbjct: 215 LEYLGLQDCQRLSDEALRHIAQGLTSLKSINLSFCVSVTDSGLKHLAKMTKLEELNLRAC 274
Query: 148 ---SETG---LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQV 200
S+ G LT G A++S ++S D + D L + Q L L+ L L Q+
Sbjct: 275 DNISDIGMAYLTEGGSAIIS--LDVSFCD----KIADQALTHISQGLFHLKSLSLSACQI 328
Query: 201 SNRG-AAVLKMFPRLSFLNLAWT------GVTKLPN-ISSLECLNLSNCT 242
++ G A + K L LN+ G+ L + +++L ++L CT
Sbjct: 329 TDEGLAKIAKSLHDLETLNIGQCARVTDKGLEYLADELNNLRAIDLYGCT 378
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 114/296 (38%), Gaps = 76/296 (25%)
Query: 90 RYLRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
R ++ + + C +T +L + T + L+ LDLS C +VTD+ +
Sbjct: 132 RGIKKVQILGCYNITDISLGYVFSTDLLNLRTLDLSLCKQVTDSSLGR------------ 179
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLP----VTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
+ L+N+ +L+LGG L + LEYL L Q +
Sbjct: 180 -----------IAQHLKNVEILELGGCSNITNTAGLSKETADGTPALEYLGLQDCQRLSD 228
Query: 204 GA--AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
A + + L +NL++ +G+ L ++ LE LNL C N +
Sbjct: 229 EALRHIAQGLTSLKSINLSFCVSVTDSGLKHLAKMTKLEELNLRACD-------NISDIG 281
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH---------- 305
+A ++ G+ I+ LDVS FC +AL H
Sbjct: 282 MAYLTEGGSAIIS---------------LDVS------FCDKIADQALTHISQGLFHLKS 320
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG 360
L LS+ I D+ + +A +L LN+ R + G+ LA L NL + L G
Sbjct: 321 LSLSACQITDEGLAKIAKSLHDLETLNIGQCARVTDKGLEYLADELNNLRAIDLYG 376
>gi|229010725|ref|ZP_04167922.1| Internalin [Bacillus mycoides DSM 2048]
gi|228750399|gb|EEM00228.1| Internalin [Bacillus mycoides DSM 2048]
Length = 760
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|395845618|ref|XP_003795524.1| PREDICTED: F-box/LRR-repeat protein 14 isoform 3 [Otolemur
garnettii]
Length = 387
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 45/326 (13%)
Query: 66 NAEAIELRG-----ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKE 119
N E++ L G +N + ++ +G+ LR+LN++ C+++T S+L + + L+
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIGS---LRALNLSLCKQITDSSLGRIAQYLKGLEV 147
Query: 120 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVT 177
L+L C +T+ G+ + + L+ L L +D GI L+ + + G L +
Sbjct: 148 LELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLE 205
Query: 178 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECL 236
L L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL L
Sbjct: 206 QLTLQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSL 258
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFC 295
NL +C D+I + + + L+G +SF D V + SL+
Sbjct: 259 NLRSC--DNISDTGIMHLAMGSLRLSGLD---------------VSFCDKVGDQSLA--- 298
Query: 296 FLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNL 353
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L
Sbjct: 299 YIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQL 358
Query: 354 EILSLSG-TQIDDYAISYMSMMPSLK 378
+ L G T+I + ++ +P LK
Sbjct: 359 TGIDLYGCTRITKRGLERITQLPCLK 384
>gi|290972682|ref|XP_002669080.1| predicted protein [Naegleria gruberi]
gi|284082622|gb|EFC36336.1| predicted protein [Naegleria gruberi]
Length = 434
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 152/357 (42%), Gaps = 40/357 (11%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
+++ MK + +S L KL + + +GI + +L L+ L++ +T ++ +
Sbjct: 80 EISKNSMKFISQLSELTKLSVGLNSIENEGINSIINLSKLTCLNIINANITSEGVKLIGK 139
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNC 241
L+ L LD+ G+ + G + L L L G + ++ L L C
Sbjct: 140 LSNLTILDISGNLIGAEGGQYIGELNNLKILVASDNELGVFGAKSIGEMNQLTSL----C 195
Query: 242 TIDSILEGNENKAPLAKISL-----AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
I + + GNE +++++ G I L + L+ LD+ ++++S
Sbjct: 196 LIGNSI-GNEGAKYISQLTQLTDLDLGRNEIGNEGFKLLTKLEKLTNLDMVSNNISDLSS 254
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
+ Q+ L LD+ + I D + + +G L L L +S G IL+ + L L
Sbjct: 255 IGQLGLLNCLDVRKNKIEDTGIRNICQLGG-LNALRLCGNPITSEGAKILS-EMVQLTNL 312
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNH 412
S+S T IDD +++ + +LK++DIS I FI Q L+
Sbjct: 313 SISETHIDDEGAKFIAQLTTLKYLDISTKRITANGVKFICQ----------------LSK 356
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
L L++ + D + +S ++L L NA ++ L LS++ L++ D
Sbjct: 357 LISLDINWNNIGDEGVLYISRMQQLETL---NAVYCNIGLEGAKLLSEMEQLTVLDV 410
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + E L L +L++ S++ L + CL R K+ D G+
Sbjct: 221 GRNEIGNEGFKLLTKLEKLTNLDMVSNNISDLSSIGQLGLLNCLD----VRKNKIEDTGI 276
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+++ + L L L +T++G +LS + L+ L + + D + + LT L+YL
Sbjct: 277 RNICQLGGLNALRLCGNPITSEGAKILSEMVQLTNLSISETHIDDEGAKFIAQLTTLKYL 336
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE 248
D+ +++ G + +L L++ W GV + + LE LN C I LE
Sbjct: 337 DISTKRITANGVKFICQLSKLISLDINWNNIGDEGVLYISRMQQLETLNAVYCNIG--LE 394
Query: 249 G 249
G
Sbjct: 395 G 395
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 31/312 (9%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G NS++ E + + L LN+ + +TS + + ++ L LD+S + + G
Sbjct: 101 GLNSIENEGINSIINLSKLTCLNIINAN-ITSEGVKLIGKLSNLTILDISGNL-IGAEGG 158
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+++ ++ L+ L S+ L G + + L+ L L G + + + + LT+L L
Sbjct: 159 QYIGELNNLKILVASDNELGVFGAKSIGEMNQLTSLCLIGNSIGNEGAKYISQLTQLTDL 218
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE-GNEN 252
DL +++ N G +L +L+ L++ ++ L +I L LN + + I + G N
Sbjct: 219 DLGRNEIGNEGFKLLTKLEKLTNLDMVSNNISDLSSIGQLGLLNCLDVRKNKIEDTGIRN 278
Query: 253 KAPLAKIS---LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
L ++ L G +E L++M L +L +S
Sbjct: 279 ICQLGGLNALRLCGNPITSEGAK-----------------------ILSEMVQLTNLSIS 315
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ I D+ + +A + L+ L++S R ++ GV + L L L ++ I D +
Sbjct: 316 ETHIDDEGAKFIAQL-TTLKYLDISTKRITANGVKFIC-QLSKLISLDINWNNIGDEGVL 373
Query: 370 YMSMMPSLKFID 381
Y+S M L+ ++
Sbjct: 374 YISRMQQLETLN 385
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 165/415 (39%), Gaps = 78/415 (18%)
Query: 122 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 181
+S K+ +GMKHL ++ + I S L L+ L++ + D +
Sbjct: 14 ISEKSKIILSGMKHLKILAA-----------SGSEIDKFSRLDQLTELNVNWNRLKDEDV 62
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECL 236
+S+ L L L+L G+++S + L+ L++ G+ + N+S L CL
Sbjct: 63 KSIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNSIENEGINSIINLSKLTCL 122
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
N+ N I S EG + L G
Sbjct: 123 NIINANITS--EG---------VKLIG--------------------------------- 138
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
++ L LD+S ++IG + + + + NL+ L S+ G + G + L L
Sbjct: 139 --KLSNLTILDISGNLIGAEGGQYIGELN-NLKILVASDNELGVFGAKSI-GEMNQLTSL 194
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF--IQQVGAETDL------VLSLTA 406
L G I + Y+S + L +D+ +I +GF + ++ T+L + L++
Sbjct: 195 CLIGNSIGNEGAKYISQLTQLTDLDLGRNEIGNEGFKLLTKLEKLTNLDMVSNNISDLSS 254
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
+ L L L++ + ++ D + + L L L +T LS + +LTNLSI
Sbjct: 255 IGQLGLLNCLDVRKNKIEDTGIRNICQLGGLNALRLCGNPITSEGAKILSEMVQLTNLSI 314
Query: 467 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV---WHELS 518
+ + + G +LK LD+ +T + + C++ I + W+ +
Sbjct: 315 SETHIDDEGAKFIAQLTTLKYLDISTKR-ITANGVKFICQLSKLISLDINWNNIG 368
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 18/174 (10%)
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL LN+ + S IL+G + +L+IL+ SG++ID ++ ++ + + + D
Sbjct: 3 NLTYLNIDWNKISEKSKIILSG-MKHLKILAASGSEIDKFSRLDQLTELNVNWNRLKDED 61
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+K ++ NL +L L L ++S ++ +S EL LS+ S
Sbjct: 62 VK-----------------SIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNS 104
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
+ + ++ + +LSKLT L+I +A +T+ G+ +L +LD+ G + E
Sbjct: 105 IENEGINSIINLSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAEGG 158
>gi|332238075|ref|XP_003268228.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Nomascus
leucogenys]
Length = 690
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 65/367 (17%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLW--LSETGLTADGIALL----SSLQNLSVLD 170
L+EL++S C TD M+H +S L L+ LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRH-ISEGCLGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAY 305
Query: 171 LGGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG---------------------- 204
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 306 CRRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTL 363
Query: 205 -----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAK 258
A+++ R++ +L +TG P+IS LS C + I EGN +
Sbjct: 364 TDNCVKALVEKCSRIT--SLVFTGA---PHISDCTFKALSTCKLRKIRFEGNR------R 412
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDS 317
++ A FI++ Y S + D + S L+ +K L L+L++ + IGD
Sbjct: 413 VTDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMG 468
Query: 318 VEMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSM 373
++ +R LNLSN + S A V L+ PNL LSL + + I Y+
Sbjct: 469 LKQFLDGPASIRIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVN 528
Query: 374 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 433
+ SL ID+S TDI V + + L+ ++ R+ + Q++D+ + LS
Sbjct: 529 IFSLVSIDLSGTDISNEGLNVLSRHKKLKELS----VSECYRITDDGIQITDSAMETLSA 584
Query: 434 FKELIHL 440
+H+
Sbjct: 585 KCHYLHI 591
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 70 IELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
I G V DA + + L + +ADC+ +T S+L +L+ + L L+L+ CV++
Sbjct: 405 IRFEGNRRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 129 TDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLVLR 182
D G+K L + +L LS +D + L NL+ L L +T +
Sbjct: 465 GDMGLKQFLDGPASIRIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIG 524
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ + L +DL G+ +SN G VL +L L+++
Sbjct: 525 YIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 150/358 (41%), Gaps = 42/358 (11%)
Query: 160 LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
+S +NL L++ P TD +R + + + YL+L + ++NR +++ PR F
Sbjct: 241 VSHCRNLQELNVSDCPTFTDESMRHISEGCLGVLYLNLSNTTITNR---TMRLLPR-HFH 296
Query: 218 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 277
NL N+S C ++ + + GN L + L+G T I+ + F YI
Sbjct: 297 NLQ--------NLSLAYCRRFTDKGLQYLNLGN-GCHKLIYLDLSGCTQISV-QGFRYIA 346
Query: 278 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 337
S + ++ + + +E +S++ + + C L L R
Sbjct: 347 NSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFKALSTCKLRKIR 406
Query: 338 F------SSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT----D 386
F + A + + PNL + ++ + I D ++ +S + L ++++N D
Sbjct: 407 FEGNRRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGD 466
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRN 444
+ G Q + + + LNL Q+SDA++ LS L +LSLRN
Sbjct: 467 M-GLKQFLDGPASI-----------RIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRN 514
Query: 445 AS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 501
LT + + ++ L ++ + ++N GL + LK L + + +T+D I
Sbjct: 515 CEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGI 572
>gi|423486542|ref|ZP_17463224.1| hypothetical protein IEU_01165 [Bacillus cereus BtB2-4]
gi|423492266|ref|ZP_17468910.1| hypothetical protein IEW_01164 [Bacillus cereus CER057]
gi|423500943|ref|ZP_17477560.1| hypothetical protein IEY_04170 [Bacillus cereus CER074]
gi|401154267|gb|EJQ61685.1| hypothetical protein IEY_04170 [Bacillus cereus CER074]
gi|401156550|gb|EJQ63954.1| hypothetical protein IEW_01164 [Bacillus cereus CER057]
gi|402439323|gb|EJV71330.1| hypothetical protein IEU_01165 [Bacillus cereus BtB2-4]
Length = 766
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|290991272|ref|XP_002678259.1| predicted protein [Naegleria gruberi]
gi|284091871|gb|EFC45515.1| predicted protein [Naegleria gruberi]
Length = 434
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 168/411 (40%), Gaps = 75/411 (18%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVA--DCRRVTSSALWALTGMTCLKELDL 122
N +EL G N + M ++ L L+V +++ L+ +TCL ++
Sbjct: 69 KNLTLLELSG-NEISKNSMKFISQLSELTKLSVGLNSIENEGINSIINLSKLTCLNIIN- 126
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
+T G+K + +S L L +S + A+G + L+NL L + L +
Sbjct: 127 ---ANITSEGVKLIGKLSNLTILDISGNLIGAEGGQYIGELKNLKTLVASDNELGVLGAK 183
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
S+ + +L L L G+ + N GA + +L+ L+L +
Sbjct: 184 SIGEMNQLTSLCLIGNSIGNEGAKYISQLSQLTDLDLGKNEI------------------ 225
Query: 243 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
G+E LAK+ E+ L+ LD+ ++++S Q+
Sbjct: 226 ------GDEGFKLLAKL---------EK----------LTNLDLVSNNISDLSSTGQLGL 260
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
L LD+ + I D + + C + L++L L +S G IL+ + L LS+S T
Sbjct: 261 LNCLDVRKNKIEDKGIRNI-CQLSGLQSLRLCANPITSEGAKILS-EMVQLTNLSISETH 318
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNHLERLNL 418
IDD +++ + +LK++DIS I FI Q L+ L L++
Sbjct: 319 IDDEGAKFIAQLTTLKYLDISTKRITANGVKFICQ----------------LSKLISLDI 362
Query: 419 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 469
+ D + +S ++L L NA ++ L LS++ L++ D
Sbjct: 363 NWNNIGDEGVLYISRMQQLETL---NAVYCNIGLEGAKLLSEMEQLTVLDV 410
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL LN+ + S IL+G + +L+IL+ SG++ID + S + L ++++
Sbjct: 3 NLTYLNIDWNKISEKSKIILSG-MKHLKILAASGSEIDKF-----SRLDQLTELNVNWNR 56
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+K + D+ ++ NL +L L L ++S ++ +S EL LS+ S
Sbjct: 57 LK--------DEDV----ESIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNS 104
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
+ + ++ + +LSKLT L+I +A +T+ G+ +L +LD+ G + E
Sbjct: 105 IENEGINSIINLSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAEGG 158
>gi|170754542|ref|YP_001782739.1| internalin [Clostridium botulinum B1 str. Okra]
gi|429246424|ref|ZP_19209744.1| internalin [Clostridium botulinum CFSAN001628]
gi|169119754|gb|ACA43590.1| leucine-rich repeat protein [Clostridium botulinum B1 str. Okra]
gi|428756514|gb|EKX79066.1| internalin [Clostridium botulinum CFSAN001628]
Length = 364
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 44/271 (16%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT---A 154
++ +V A+ G L+++ + + ++ G+++L I L L L E LT
Sbjct: 58 SNLEKVIRLAIRKPIGKLRLRDVVDIKKLDASNKGIQNLDGIENL--LRLQELDLTDNEI 115
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
D I+ LSSL+++S+L LG +TD+ SL+ +KL+ L L+ ++V + LK F ++
Sbjct: 116 DDISALSSLKDISILKLGKNKITDIA--SLKNCSKLKELYLFDNKVID--ITPLKNFEKI 171
Query: 215 SFLNLAWTGVTK---LPNISSLECLNL-SNCTID--SILEGNENKAPLAKISLAGTTF-- 266
L+L V LP + +L+ + L +N ID IL + L ++LAG F
Sbjct: 172 YILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFKPILRMQQ----LTTVNLAGNNFTD 227
Query: 267 ---INEREAF--LYI------------ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
IN+ ++ LYI S L LDVSN+ + ++ + +E L++S
Sbjct: 228 MQDINQLKSLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKIMDMNSISNLNGIEELNIS 287
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
S+ I D + N +NL+ + R+++
Sbjct: 288 SNYIRD------IKILENFKNLSKVDLRYNN 312
>gi|297728491|ref|NP_001176609.1| Os11g0565920 [Oryza sativa Japonica Group]
gi|77551585|gb|ABA94382.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
Japonica Group]
gi|125577543|gb|EAZ18765.1| hypothetical protein OsJ_34291 [Oryza sativa Japonica Group]
gi|255680194|dbj|BAH95337.1| Os11g0565920 [Oryza sativa Japonica Group]
Length = 985
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 154/397 (38%), Gaps = 66/397 (16%)
Query: 136 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
LL+++ LE + LS+ G T L SLQNL L+L G+P + V L LT L Y
Sbjct: 144 LLNLTYLEHIDLSKNQLQGQTGRVPEFLGSLQNLRYLNLSGIPFSGEVPPQLGNLTNLHY 203
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE- 251
L L S+ G ++F ++ W L + SL L++S+ ++ + + +
Sbjct: 204 LGL-----SDTG---------INFTDIQW-----LARLHSLTHLDMSHTSLSMVHDWADV 244
Query: 252 -NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
N P K+ L++ L + D S S F + LE LDLS
Sbjct: 245 MNNIPSLKV--------------LHLAYCNLVYAD---QSFSHF----NLTNLEELDLSV 283
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+ L+ LNL +T+ + G +L L LS T D +
Sbjct: 284 NYFNHPIASCWFWNAQGLKYLNLGSTKLYGQFPNV-PGQFGSLRFLDLSSTCNIDIVTTN 342
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
++ + +L+ I + + I G I + +L + N L L L +S
Sbjct: 343 LTNLCNLRIIHLERSQIHGDIAK-------LLQRLPRCSYNRLNELYLSDNNISGILPNR 395
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS-FKPPRSLKLLD 489
L L+ L + + L+ Q+ S LT L + L + F RSLK LD
Sbjct: 396 LDHLTSLVILDISHNKLSGPLPPQIGMFSNLTYLDLSSNNLNGVIIDEHFTSMRSLKTLD 455
Query: 490 LHGG---------WLL---TEDAILQFCKMHPRIEVW 514
L G WL E A+ C M PR W
Sbjct: 456 LSGNSLKILVDSEWLPLFSLEVALFSPCHMGPRFPGW 492
>gi|290988666|ref|XP_002677018.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284090623|gb|EFC44274.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 480
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS- 123
N E++ L + V E + +YL+SL + C ++S A + L + L +LD+S
Sbjct: 227 QNLESLTLTQMSEVTDECFKFFSNLKYLKSLKIQSCN-LSSEACYHLNSLKKLTKLDMSD 285
Query: 124 ---------------RCVKVTD-----AGMKHLLSISTLEKLWLSETGLTADGIALLSSL 163
R +K+ D G + ++ ++ KL+L+ ++ +G+ +S +
Sbjct: 286 NIIDQLSFINGMKEIRSLKLMDNRLGNEGCLFVSALPSITKLFLTGNEISNEGLLHISQM 345
Query: 164 QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 223
NL+ LDLG +T + L + + LTKL+ L ++ +++S+ + L L+F + T
Sbjct: 346 TNLTDLDLGNNKITSIELIT-ENLTKLQKLGIYVNRISSADVSKLVDLRELNFSHNKLTS 404
Query: 224 VTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
+ L N+ L+ L L + + L +E+ P
Sbjct: 405 LKGLNNLKHLQNLFLYGNKLATKLFTSESHFP 436
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 42/351 (11%)
Query: 125 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL-VLRS 183
C+K M++L SI +++L E T L L NL + G V + ++R+
Sbjct: 98 CIKYLGKYMRNLESIHVVKRL---EPNATILQCQCLEGLDNLKEIVFKGSQVVNAKLMRN 154
Query: 184 LQVLTKLE--YL---DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS-SLECLN 237
+ L ++E YL + W + VS V+ ++ F +W + + NI SL+ L
Sbjct: 155 CKSLKRIEIRYLKNNEFWENIVSPLEEFVI-FNVKMGFN--SWKVL--VCNIKKSLKVLK 209
Query: 238 LSNCTIDSILEGNE--NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS-RF 294
+ CT LE +E L ++L + + + + L L + + +LS
Sbjct: 210 IGKCTFTK-LEYDEMSEFQNLESLTLTQMSEVTDECFKFFSNLKYLKSLKIQSCNLSSEA 268
Query: 295 CF-LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
C+ L +K L LD+S ++I D + + + +R+L L + R + G + LP++
Sbjct: 269 CYHLNSLKKLTKLDMSDNII--DQLSFINGMKE-IRSLKLMDNRLGNEGC-LFVSALPSI 324
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
L L+G +I + + ++S M +L +D+ N I +L+ +NL L
Sbjct: 325 TKLFLTGNEISNEGLLHISQMTNLTDLDLGNNKI--------TSIELI-----TENLTKL 371
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
++L + ++S A + L +E L+ + LT SL L++L L NL
Sbjct: 372 QKLGIYVNRISSADVSKLVDLRE---LNFSHNKLT--SLKGLNNLKHLQNL 417
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 393 QVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
++G T L + +LE L L Q ++V+D S K L L +++ +L+ +
Sbjct: 209 KIGKCTFTKLEYDEMSEFQNLESLTLTQMSEVTDECFKFFSNLKYLKSLKIQSCNLSSEA 268
Query: 452 LHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLD 489
+ L+SL KLT L + D ++ S + K RSLKL+D
Sbjct: 269 CYHLNSLKKLTKLDMSDNIIDQLSFINGMKEIRSLKLMD 307
>gi|229166263|ref|ZP_04294022.1| Internalin [Bacillus cereus AH621]
gi|423594649|ref|ZP_17570680.1| hypothetical protein IIG_03517 [Bacillus cereus VD048]
gi|228617208|gb|EEK74274.1| Internalin [Bacillus cereus AH621]
gi|401223601|gb|EJR30169.1| hypothetical protein IIG_03517 [Bacillus cereus VD048]
Length = 766
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|326486763|gb|ADZ76423.1| TLR3 [Epinephelus coioides]
Length = 909
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 181/415 (43%), Gaps = 53/415 (12%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
+LR + + T + L T +T L EL + V++ + + L + TL + +
Sbjct: 270 FLRKMKLVTLTNTTFTGLQK-TSLTFL-ELSGNGMVRIEEGSFRWLSRLQTLILVDNNIK 327
Query: 151 GLTADGIALLSSLQNLSVLDL----GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
LT D L SL+ L + + +P+ D S Q L+ LE L L + V N
Sbjct: 328 HLTKDTFRGLKSLEKLQLTNALASSHPIPIIDDF--SFQPLSALESLILQRTAVRNITEH 385
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
L L+++W+ T L NIS+ ++L+ +PL K++L GT
Sbjct: 386 TFTGLTSLKELDMSWSSYTSLRNISNKTFISLAG-------------SPLRKLNLTGT-- 430
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 326
A I+ S L + L + F+ Q E + G D VE + +
Sbjct: 431 -----AIAQIDPRSFSVLRNLTTLLLDYNFIKQNLTGEEFE------GLDQVEQIY-MSN 478
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI----SYMSMMPSLKFIDI 382
N + +NLS+ F ++P+L +L+L + I + AI S +P+L ++D+
Sbjct: 479 NHQKINLSSDSFV---------NVPSLRVLTLGRSLIAE-AINCDPSPFRHLPNLTYLDL 528
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
SN +I I+ E + L + LQ+ N+L RL + + LF +T + LI L L
Sbjct: 529 SNNNIAN-IRDNTFEGLVNLKVLKLQH-NNLARL-WKSANLGGPVLFLKNTPRLLI-LDL 584
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 497
+ L ++ L LS L NLS+ +L + F +SL+ L+L + T
Sbjct: 585 DSNGLDEIPAEALRGLSDLHNLSLASNLLNSLQEFIFDDLKSLRFLNLQKNLITT 639
>gi|423366834|ref|ZP_17344267.1| hypothetical protein IC3_01936 [Bacillus cereus VD142]
gi|401087016|gb|EJP95231.1| hypothetical protein IC3_01936 [Bacillus cereus VD142]
Length = 760
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|167523190|ref|XP_001745932.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775733|gb|EDQ89356.1| predicted protein [Monosiga brevicollis MX1]
Length = 2039
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 183/429 (42%), Gaps = 88/429 (20%)
Query: 110 ALTGMTCLKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
A GM L LDLS + + + +A + HL +++L+ T L A L L L+
Sbjct: 1532 AFQGMVALTTLDLSDTQLLALGNASVAHLPKLTSLKL----PTTLRQLASAALLDLPQLA 1587
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYL-----------------------DLWGSQVSNRG 204
LDL V L +L L KL+ L DL G+Q++
Sbjct: 1588 TLDLSATQVQQLASGALSNLAKLDSLIVSPSLETLVPGCFTNMTGVTSLDLAGTQLAQLE 1647
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLPNI-----SSLECLNLSNCTIDSILEGNENKAPLAKI 259
A VL P L +NL+ + V L + +SL ++LSN I++ N ++ P +K
Sbjct: 1648 AQVLTGLPALETINLSVSAVRTLGPLAFAGPTSLSAVDLSNTMIEAWTTNNASQGPFSK- 1706
Query: 260 SLAGTTFINEREAFLYIET---------SLLSFLDVSNSSLSR-----FCFLTQMKALEH 305
T ++ A + ++T S LS +D+S + ++ F L+ + AL
Sbjct: 1707 ---STAIVSLSSAGMVLKTLTPHGFDGLSHLSAMDLSAADITSIPALAFAGLSNVTAL-L 1762
Query: 306 LDLSS-SMIGDDSVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 363
L++S + +G G N L L+LSN ++ AG L L+ L++SG +
Sbjct: 1763 LNVSRLTQLGSQGF-----TGLNHLLTLDLSNAPLATLPASGFAG-LTTLQTLNMSGAHV 1816
Query: 364 DDY-AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
A ++ + LK +D+S + L A + ++ L+RL L Q
Sbjct: 1817 TALPADAFQGLNVQLKDLDLSGNKLA------------RLEAAAFKAVSGLQRLYLSGNQ 1864
Query: 423 VSDATLFPLSTFKELIHLSLRNASLT---DVS-LHQLSSLSK--LTNLSI--------RD 468
++ L LIHL L + +L +VS L L+SL + L N+ I RD
Sbjct: 1865 ITQVDAQALGGLSTLIHLDLSDNALAAPLNVSVLAPLTSLQQLCLGNVKINCCGFEKLRD 1924
Query: 469 AVLTNSGLG 477
A + ++G G
Sbjct: 1925 AGVIDAGCG 1933
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 157/377 (41%), Gaps = 51/377 (13%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+STL L LS + A ++L L L L P+T L + L L+ LDL S
Sbjct: 403 LSTLTTLDLSNNSIGALTAHTFATLTALRTLRLRNNPITSLAGSAFVELLNLQTLDLEDS 462
Query: 199 QVSNRGAAVLKMFPRLSFLNL------------AWTGVTKLP------------------ 228
++ A RL+ L L A+ G+ +LP
Sbjct: 463 SLTTLPAQAFAGLSRLTSLALKSRAKIANMAVNAFVGLDRLPELDLSNQAIQEIDIGMFS 522
Query: 229 NISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
++SL L+LSN +++I N L+ ++ AG F N A + + L+ L++S
Sbjct: 523 GLTSLTKLDLSNNRLNTIQSTAFNPLENLSALNFAGNPF-NGVAASAFRGLTQLTALNLS 581
Query: 288 NSSLSRFCFLT--QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
+ ++S T + + LDLS + + A + A L L+LSN R ++
Sbjct: 582 HCNVSTLIGGTFETLSRVTSLDLSGIKLRTLPSQAFAGLSA-LPELDLSNMRITTVAGNA 640
Query: 346 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 405
AG L L L L G I S + +P+LK +++S+ + VL
Sbjct: 641 FAG-LDALTTLKLLGNPITTIESSAFANLPALKALNLSHLGLS------------VLPAN 687
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTF---KELIHLSLRNASLTDVSLHQLSSLSKLT 462
NL L+ L L Q++ F + L L LT ++ H S L+ LT
Sbjct: 688 TFVNLPALQNLTLTGNQLATLGASNQPAFVACPRIRSLDLSMQKLTAITAHAFSGLTGLT 747
Query: 463 NLSIRDAVLTNSGLGSF 479
+L++R+ ++T+ G+F
Sbjct: 748 SLNLRNNLITSLATGAF 764
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 145/336 (43%), Gaps = 50/336 (14%)
Query: 110 ALTGMTCLKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ--N 165
A G++ L ELDLS R V L +++TL+ L T + + A L +L+ N
Sbjct: 616 AFAGLSALPELDLSNMRITTVAGNAFAGLDALTTLKLLGNPITTIESSAFANLPALKALN 675
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF---PRLSFLNLAWT 222
LS L L LP V L L+ L L G+Q++ GA+ F PR+ L+L+
Sbjct: 676 LSHLGLSVLPANTFV-----NLPALQNLTLTGNQLATLGASNQPAFVACPRIRSLDLSMQ 730
Query: 223 GVTKLP-----NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 277
+T + ++ L LNL N I S+ G A +L+ N ++
Sbjct: 731 KLTAITAHAFSGLTGLTSLNLRNNLITSLATG-------AFANLSAELASNAPSTLAHVL 783
Query: 278 TSLLSF----------LDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
L+ F LD+ N+ L+ + AL+ L L++ I + + + +
Sbjct: 784 YLLVCFAALIKCQVTQLDIRNNKLTALASSSFDGLSALQSLSLANMAITKLPLGVFSGLN 843
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
A L+ L L T G +LA L L L L+ +Q+ +++ P L +D+S+T
Sbjct: 844 A-LQVLRLDGTGVQEIGAMVLA-PLSQLSTLWLNSSQLTTITTKWLASKPHLMQVDLSHT 901
Query: 386 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
+Q+V A ++L LE +NL+ T
Sbjct: 902 Q----LQKV--------PTFAFEDLPALEAINLDNT 925
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 168/413 (40%), Gaps = 39/413 (9%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
GAFR L +L R +AL ++ + + L L+LS+ V+ A + +++L +
Sbjct: 1435 GAFRDLPALQSIQLRGQQLTALDSMVWSAVPRLTALNLSQQALVSVAPAP-FVGLASLTQ 1493
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +GL L +++ LDL G + + + Q + L LDL +Q+ G
Sbjct: 1494 LNLSHSGLIHLPDQAFEGLSHVTSLDLSGNALQWVGQAAFQGMVALTTLDLSDTQLLALG 1553
Query: 205 AAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
A + P+L+ L L T L ++ L L+LS + + G + LAK+
Sbjct: 1554 NASVAHLPKLTSLKLPTTLRQLASAALLDLPQLATLDLSATQVQQLASGALSN--LAKLD 1611
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
L + SL +L CF T M + LDL+ + + ++
Sbjct: 1612 ------------SLIVSPSL--------ETLVPGCF-TNMTGVTSLDLAGTQLAQLEAQV 1650
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
+ + A L +NLS + + G AG +L + LS T I+ + + S P K
Sbjct: 1651 LTGLPA-LETINLSVSAVRTLGPLAFAGPT-SLSAVDLSNTMIEAWTTNNASQGPFSKST 1708
Query: 381 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
I + G + + L+ L+HL ++L ++ + + L
Sbjct: 1709 AIVSLSSAGMVLK-------TLTPHGFDGLSHLSAMDLSAADITSIPALAFAGLSNVTAL 1761
Query: 441 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
L + LT + + L+ L L + +A L F +L+ L++ G
Sbjct: 1762 LLNVSRLTQLGSQGFTGLNHLLTLDLSNAPLATLPASGFAGLTTLQTLNMSGA 1814
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 30/367 (8%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
+ +LD+ R K+T +S L+ L L+ +T + + S L L VL L G V
Sbjct: 797 VTQLDI-RNNKLTALASSSFDGLSALQSLSLANMAITKLPLGVFSGLNALQVLRLDGTGV 855
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NIS 231
++ L L++L L L SQ++ L P L ++L+ T + K+P ++
Sbjct: 856 QEIGAMVLAPLSQLSTLWLNSSQLTTITTKWLASKPHLMQVDLSHTQLQKVPTFAFEDLP 915
Query: 232 SLECLNLSNCTIDSILEGN--ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+LE +NL N + +EG+ N L + ++G + + + ++ L+ L +S+
Sbjct: 916 ALEAINLDNTAALTTVEGSAFANLPRLQSLVVSGGS-LETWASNALVDCPSLTTLTISHQ 974
Query: 290 SLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGIL 346
L+ L+ LDLS + I D + A VG NL L++ + G
Sbjct: 975 RLAALPTEAFAGASGLQALDLSYNNISD--IGKNAFVGLNNLTQLHIEGNPIAVLEEGAF 1032
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLT 405
AG L Q D A + +++P+ F ++S + QV L L
Sbjct: 1033 AG---------LRRVQALDLAATAFTILPTNVFANMS------ALGQVTLPASLATLQSN 1077
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
AL +L L ++ T++S + L L ++L LT V+ + LS L +L
Sbjct: 1078 ALAHLPMLASVDFSHTKLSALPEYSLVDLPRLTTVALPPNRLTAVAANALSDCPGLLSLD 1137
Query: 466 IRDAVLT 472
+ + LT
Sbjct: 1138 LSNQQLT 1144
>gi|91085811|ref|XP_974701.1| PREDICTED: similar to partner of paired CG9952-PA [Tribolium
castaneum]
Length = 439
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 22/168 (13%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL---- 147
L L + DC++++ AL TG+T L ++LS CV +TD+G+KHL ++ L +L L
Sbjct: 250 LEHLGLQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHLAKMTNLRELNLRSCD 309
Query: 148 --SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVSN 202
S+TG+ A+G + +SSL ++S D + D L + Q L L L + Q+S+
Sbjct: 310 NISDTGMAFLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLRNLLMSACQLSD 364
Query: 203 RG-AAVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSNCT 242
G A + L LN+ G+T + ++ L+C++L CT
Sbjct: 365 EGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDLYGCT 412
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 42/212 (19%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
H+ D ++HL PSL E + L+ + E + + L S+N++
Sbjct: 234 HVGDQGIQHLASGN---PSL--------EHLGLQDCQKLSDEALKHATGLTSLISINLSF 282
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM-----------------------KHL 136
C +T S L L MT L+EL+L C ++D GM + L
Sbjct: 283 CVSITDSGLKHLAKMTNLRELNLRSCDNISDTGMAFLAEGGSRISSLDVSFCDKIGDQAL 342
Query: 137 LSIS----TLEKLWLSETGLTADGIA-LLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTK 189
+ IS L L +S L+ +G+A + +SL +L L++G VTD L ++ + L +
Sbjct: 343 VHISQGLFNLRNLLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLR 402
Query: 190 LEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
L+ +DL+G ++++ G + P+LS LNL
Sbjct: 403 LKCIDLYGCTRITTVGLERIMKLPQLSVLNLG 434
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 128/294 (43%), Gaps = 44/294 (14%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSIS--TLEKLWLSETGLTADG--IALLSSLQN 165
+ G+ L+ L+L C V D G+ H TL +L LS D + L+N
Sbjct: 138 VIQGIPNLESLNLRGCYNVGDVGISHAFVADSPTLTELDLSLCKQVTDTSLTRIAQHLKN 197
Query: 166 LSVLDLGGLP-VTD----LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF-PRLSFLNL 219
L VL+LGG VT+ L+ L+ L +L W V ++G L P L L L
Sbjct: 198 LEVLELGGCSNVTNSGLMLIAWGLKKLKRLNLRSCW--HVGDQGIQHLASGNPSLEHLGL 255
Query: 220 ------AWTGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINERE 271
+ + ++SL +NLS C DS L+ L +++L I++
Sbjct: 256 QDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHLAKMTNLRELNLRSCDNISDTG 315
Query: 272 -AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
AFL S +S LDVS FC IGD ++ ++ NLRN
Sbjct: 316 MAFLAEGGSRISSLDVS------FC---------------DKIGDQALVHISQGLFNLRN 354
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMS-MMPSLKFIDI 382
L +S + S G+ +A L +LE L++ +++ D ++ ++ + LK ID+
Sbjct: 355 LLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDL 408
>gi|161333858|ref|NP_796050.2| F-box/LRR-repeat protein 13 isoform b [Mus musculus]
gi|61213702|sp|Q8CDU4.2|FXL13_MOUSE RecName: Full=F-box/LRR-repeat protein 13; AltName: Full=F-box and
leucine-rich repeat protein 13
Length = 790
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 73/311 (23%)
Query: 68 EAIELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
+ I G + DA + + + + + + DC+ +T S+L +L+ + L L+L+ C+
Sbjct: 454 KKIRFEGNKRISDACFKSIDRNYPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCI 513
Query: 127 KVTDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLV 180
++ D G+KH L +L L+ L D I L NL L+L +TDL
Sbjct: 514 RIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLA 573
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
+ + + L +DL G+ +SN G +L KL +S +C+N+++
Sbjct: 574 IEYIASMLSLISVDLSGTLISNEGMTILSRH-------------RKLREVSVSDCVNITD 620
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
I + Y +TSLL
Sbjct: 621 FGIRA-----------------------------YCKTSLL------------------- 632
Query: 301 KALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 358
LEHLD+S S + DD ++ +A + +LN++ + + AG+ IL+ L IL +
Sbjct: 633 --LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLHILDI 690
Query: 359 SGT-QIDDYAI 368
SG Q+ D I
Sbjct: 691 SGCIQLTDQII 701
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 37/305 (12%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLT 153
LN C T + L A++ L+EL++S C TD M+H+ + L LS T +T
Sbjct: 310 LNFRGCDFRTKT-LKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNTTIT 368
Query: 154 ADGIALL----SSLQNLSVLDLGGLPVTDLVLRSLQV---LTKLEYLDLWGSQVSNRGAA 206
+ LL +LQNLS+ TD L+ L + KL YLDL G
Sbjct: 369 NRTMRLLPRYFHNLQNLSLAYCRKF--TDKGLQYLNLGNGCHKLIYLDLSGCT-----QV 421
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTT 265
+++ PR+S + L + P+IS LS+C + I EGN+ +IS A
Sbjct: 422 LVEKCPRISSVVLIGS-----PHISDSAFKALSSCDLKKIRFEGNK------RISDACFK 470
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--A 322
I+ Y + + +D + S L+ +K L L+L++ + IGD ++
Sbjct: 471 SIDRN----YPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDG 526
Query: 323 CVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFI 380
LR LNL+N + V L+ PNL L+L + + D AI Y++ M SL +
Sbjct: 527 PASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISV 586
Query: 381 DISNT 385
D+S T
Sbjct: 587 DLSGT 591
>gi|290972876|ref|XP_002669176.1| predicted protein [Naegleria gruberi]
gi|284082720|gb|EFC36432.1| predicted protein [Naegleria gruberi]
Length = 390
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 162/388 (41%), Gaps = 92/388 (23%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
G +YL SL++++ + ++ + + LKELD+S +T+ G+ + S L KL
Sbjct: 23 FGELKYLTSLDISN-KHLSDEYIATIGNWDTLKELDVSLNSDITERGIGIISEKSLLNKL 81
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+ ++ G L+S ++NL+ L++ T L + ++ ++++E L
Sbjct: 82 SVHSMTISTKGFELISRMKNLTDLNI---MQTVLDIEKIKFISEMEQL-----------T 127
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
A+ +SF N+ G +L I LE L IL+ N N+
Sbjct: 128 AI-----DISFNNI---GTDELGLICKLEKL--------RILKANGNQ------------ 159
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
IN A L + +K L HL ++++ IG E V C+G
Sbjct: 160 -INSDGAKL----------------------IKDLKHLTHLSINNNQIGK---EGVKCIG 193
Query: 326 A--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
+L +L + + R G+ + G L L LS+ I + Y+S + L +DI
Sbjct: 194 ELEHLTHLAVGSNRIKDKGLKYI-GRLQRLNFLSIYDNGIKGKGVKYLSSLSRLVTLDIH 252
Query: 384 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA----TLFPLSTFKELIH 439
+ I T L+ +T L++L+ +SD + ++ K+L
Sbjct: 253 SNGIDS-----SKTTKLISEMTQLRSLD-----------ISDNYFGNSFKCITNLKQLTK 296
Query: 440 LSLRNASLTDVSLHQLSSLSKLTNLSIR 467
L++ LTD +S LS+LT L IR
Sbjct: 297 LNISENDLTDKFASSISQLSQLTYLDIR 324
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 41/231 (17%)
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS-NTRFSSAGVGILA-------- 347
++K L LD+S+ + D E +A +G L+ L++S N+ + G+GI++
Sbjct: 25 ELKYLTSLDISNKHLSD---EYIATIGNWDTLKELDVSLNSDITERGIGIISEKSLLNKL 81
Query: 348 ---------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS----NTDIK 388
+ NL L++ T +D I ++S M L IDIS TD
Sbjct: 82 SVHSMTISTKGFELISRMKNLTDLNIMQTVLDIEKIKFISEMEQLTAIDISFNNIGTDEL 141
Query: 389 GFIQQV------GAETDLVLSLTA--LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 440
G I ++ A + + S A +++L HL L++ Q+ + + + L HL
Sbjct: 142 GLICKLEKLRILKANGNQINSDGAKLIKDLKHLTHLSINNNQIGKEGVKCIGELEHLTHL 201
Query: 441 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
++ + + D L + L +L LSI D + G+ L LD+H
Sbjct: 202 AVGSNRIKDKGLKYIGRLQRLNFLSIYDNGIKGKGVKYLSSLSRLVTLDIH 252
>gi|380022016|ref|XP_003694851.1| PREDICTED: chaoptin-like [Apis florea]
Length = 1073
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 205/498 (41%), Gaps = 73/498 (14%)
Query: 81 EWMAYLGAFRYLRSLNVADC--RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
E ++LG R L+ L+V + + AL L ++ L + R + +
Sbjct: 111 EEHSFLGVNRTLQELHVINSILEKFPHEALQILGNLSILS-IAGHRISTLPANSFAESAA 169
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ +EKL +S L++ + + + L+ L LDL G + +L + L EYLDL +
Sbjct: 170 AAKIEKLEISNGTLSSLPVEVFAPLKKLKRLDLHGNKIKELKRNQFKGLRDTEYLDLSHN 229
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENK 253
+S + L ++ + N++ + L S L+ LNLS+ I L+ N +
Sbjct: 230 LISKLDGSHLADLTKMGWCNMSHNAIADLKRGTFARNSLLKVLNLSHNKIRK-LDSNTFR 288
Query: 254 AP--LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLS 309
L ++ L+ IN+ + + + +D++ + + + F Q++ E LD+S
Sbjct: 289 GMRFLIRLYLSDNQ-INDVGRGTFGPVTRIGTIDLARNFIKKIDFQMFNQLQFAELLDVS 347
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD---- 365
+ + +E ++ L ++LS S G + N+ +L LS ++++
Sbjct: 348 ENFVT--VIEKLSFKDLYLTRIDLSRNEISKIEPGAFENCV-NITMLDLSHNKLENISKY 404
Query: 366 ------YA----ISYMSM----------MPSLKFIDISNTDIKGFIQQVGAE------TD 399
YA +SY + M LK +++S+ I +Q + D
Sbjct: 405 SFDSATYATELQLSYNQLTALNQVPLHNMTGLKVLNVSHNSIHSVPRQTFPKLYELHTID 464
Query: 400 LV------LSLTALQNLNHLERLNLEQT---QVSDATLFPLSTFKELIHLSLRNASLTDV 450
L + Q L L LNL ++ +T PL+T L+ L + LTDV
Sbjct: 465 LSHNNLSEIHNAVFQTLFSLRFLNLSHNSLDKIKPSTFGPLAT---LLELDMSYNRLTDV 521
Query: 451 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPR 510
+ L+ L L++R+ LT F+ P SL LD WL + P
Sbjct: 522 ARSSLTRLPSCRRLTVRNNRLTK----IFQLPISLASLDFSENWL----------EEIPT 567
Query: 511 IEVWHELSVICPSDQIGS 528
++VW ++ + D G+
Sbjct: 568 VDVWPTMNALLSLDLAGN 585
>gi|290974240|ref|XP_002669854.1| predicted protein [Naegleria gruberi]
gi|284083406|gb|EFC37110.1| predicted protein [Naegleria gruberi]
Length = 357
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
SV +E Y+ +++LN++D + S L+ LT + L L L C +++ G++HL
Sbjct: 159 SVTSESCQYIQKCELIKNLNLSDNKIGNESCLY-LTKLKNLTILRLEDC-NISEKGVEHL 216
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
I TL L +S+ + DG + L+NL+ L V ++++ L KL L+L
Sbjct: 217 SQIETLTILNVSKNRIEDDGFVNICKLKNLTSLKAASCSVES--IKNITNLIKLTSLNLG 274
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL--SNCTIDSI 246
+ + N G ++ L L L V L +SS+E L+L +N + D++
Sbjct: 275 QNSIDNEGVKIIGELTNLKTLTLENNVFQPEAVQYLTKLSSMEVLDLRDNNLSFDNV 331
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHL--LSISTLEKLWLSETGL-TADGIALLSSLQNLSVLD 170
+ C+ E +S C + +K+L +L++L L GL ++ +A SL++LS++
Sbjct: 79 LKCVNEF-VSDCPYSFEEFVKYLDECQFDSLKRLNL--IGLEVSNVVARFGSLESLSLIG 135
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 230
+G + S+ L++L YL+L S V++ ++ + LNL+ K+ N
Sbjct: 136 MGAE-----IGNSIGNLSRLTYLNLNASSVTSESCQYIQKCELIKNLNLSD---NKIGNE 187
Query: 231 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
S L L N TI + + N IS G +++ IET L+ L+VS +
Sbjct: 188 SCLYLTKLKNLTILRLEDCN--------ISEKGVEHLSQ------IET--LTILNVSKNR 231
Query: 291 LSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGIL 346
+ F + ++K L L +S SVE + + L +LNL + GV I+
Sbjct: 232 IEDDGFVNICKLKNLTSLKAASC-----SVESIKNITNLIKLTSLNLGQNSIDNEGVKII 286
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
G L NL+ L+L A+ Y++ + S++ +D+ + ++
Sbjct: 287 -GELTNLKTLTLENNVFQPEAVQYLTKLSSMEVLDLRDNNL 326
>gi|51850107|dbj|BAD42395.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 538
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 35/317 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
+ AE L L SLNV++ R + AL T L L++S ++ AG K L
Sbjct: 181 IGAEGARLLANHPTLTSLNVSNGR-IGPEGAQALAANTRLTTLNVS-GNRIGVAGAKALA 238
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG--GLPVTDLVLRSLQVLTKLEYLDL 195
+ TL L +S+ + +G L++ L+ LD G+ V +L L L +
Sbjct: 239 ANQTLRSLDVSDNRIGDEGARELAACTQLTTLDANRNGIGVDGAT--ALAASRTLTSLAI 296
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
G+++ + G L RL+ LN+ TGV ++ L S L+GN+
Sbjct: 297 GGNEIGDAGVLALAANARLTTLNVESTGV----GADGVKALAASKTLTWLRLDGND---- 348
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
I AG T L TSL + L+ S L L LDL + IG
Sbjct: 349 ---IGNAGATA-------LAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIG 398
Query: 315 DDSVEMVAC----VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
D V ++ V ++R NL + ++ V + AG L L +SG I D
Sbjct: 399 DAGVRTLSANATLVWLSVRRNNLED----ASAVSLAAGK--TLTTLDISGNGIQDQGAKA 452
Query: 371 MSMMPSLKFIDISNTDI 387
++ P+L +D+S+ DI
Sbjct: 453 LAANPTLTTLDVSSNDI 469
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 141/352 (40%), Gaps = 35/352 (9%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LK LDLSRC +T AG+ HL + L +L + + A+G LL++ L+ L++
Sbjct: 146 LKALDLSRCRGPITAAGIAHLSRLP-LVRLNVRNKRIGAEGARLLANHPTLTSLNVSNGR 204
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ ++L T+L L++ G+++ GA L L L+++ I
Sbjct: 205 IGPEGAQALAANTRLTTLNVSGNRIGVAGAKALAANQTLRSLDVSDN------RIGDEGA 258
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
L+ CT + L+ N N I + G T + + D +L+
Sbjct: 259 RELAACTQLTTLDANRNG-----IGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANA 313
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
LT L++ S+ +G D V+ +A L L L +AG LA +L
Sbjct: 314 RLTT------LNVESTGVGADGVKALAAS-KTLTWLRLDGNDIGNAGATALAAST-SLTT 365
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAETDLVLSLTALQNLNHLE 414
L L ++I ++ L +D+ DI ++ + A LV
Sbjct: 366 LHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRTLSANATLVW------------ 413
Query: 415 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L++ + + DA+ L+ K L L + + D L++ LT L +
Sbjct: 414 -LSVRRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDV 464
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR----------- 124
N + L A + LRSL+V+D R+ L T L LD +R
Sbjct: 227 NRIGVAGAKALAANQTLRSLDVSD-NRIGDEGARELAACTQLTTLDANRNGIGVDGATAL 285
Query: 125 ------------CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 172
++ DAG+ L + + L L + TG+ ADG+ L++ + L+ L L
Sbjct: 286 AASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLD 345
Query: 173 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
G + + +L T L L L S++ GA L +L+ L+L +
Sbjct: 346 GNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGY 394
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 132/343 (38%), Gaps = 46/343 (13%)
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP--RLSFLN--LAWTGVTKLPNISS 232
TD LR L K L ++ G A L P RL+ N + G L N +
Sbjct: 135 TDDDLRGLPASLKALDLSRCRGPITAAGIAHLSRLPLVRLNVRNKRIGAEGARLLANHPT 194
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS--S 290
L LN+SN I P +LA T L+ L+VS +
Sbjct: 195 LTSLNVSNGRI----------GPEGAQALAANTR--------------LTTLNVSGNRIG 230
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
++ L + L LD+S + IGD+ E+ AC L L+ + G LA
Sbjct: 231 VAGAKALAANQTLRSLDVSDNRIGDEGARELAACT--QLTTLDANRNGIGVDGATALAAS 288
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQQVGAETDLV------- 401
L L++ G +I D + ++ L +++ +T + ++ + A L
Sbjct: 289 R-TLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAASKTLTWLRLDGN 347
Query: 402 ----LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 457
TAL L L+LE +++ L+ +L L L + D + LS+
Sbjct: 348 DIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRTLSA 407
Query: 458 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
+ L LS+R L ++ S ++L LD+ G + + A
Sbjct: 408 NATLVWLSVRRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGA 450
>gi|209154948|gb|ACI33706.1| F-box/LRR-repeat protein 14 [Salmo salar]
Length = 400
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 74/345 (21%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL--SISTLEKLWL 147
R +R + + RR S + + GM ++ L+LS C +TD G+ H I +L L L
Sbjct: 68 RGIRRVQILSLRRSLS---YVIQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNL 124
Query: 148 SETGLTADGI--ALLSSLQNLSVLDLGGLP---------------------------VTD 178
S D + L+NL VL+LGG V+D
Sbjct: 125 SLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSD 184
Query: 179 LVLRSLQVLTK--------LEYLDLWGSQ--VSNRGAAVLKMFPRLSFLNLAW------T 222
+ + L +T+ LEYL L Q + K +L LNL++
Sbjct: 185 VGIGHLAGMTRSAAEGCLNLEYLTLQDCQKLTDLSLKHISKGLAKLRVLNLSFCGGISDA 244
Query: 223 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
G+ L +++SL LNL +C D+I + + + L+G +S
Sbjct: 245 GMIHLSHMTSLWSLNLRSC--DNISDTGIMHLAMGTLRLSGLD---------------MS 287
Query: 283 FLD-VSNSSLSRFCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFS 339
F D + + SL+ ++ Q + L+ L L S I DD + + LR LN+ R +
Sbjct: 288 FCDKIGDQSLA---YIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRIT 344
Query: 340 SAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
G+ ++A HL L + L G T+I + ++ +P LK +++
Sbjct: 345 DKGLELIADHLTQLTGIDLYGCTKITKRGLERITQLPCLKVLNLG 389
>gi|423663695|ref|ZP_17638864.1| hypothetical protein IKM_04092 [Bacillus cereus VDM022]
gi|401295595|gb|EJS01219.1| hypothetical protein IKM_04092 [Bacillus cereus VDM022]
Length = 760
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|423434920|ref|ZP_17411901.1| hypothetical protein IE9_01101 [Bacillus cereus BAG4X12-1]
gi|401125158|gb|EJQ32918.1| hypothetical protein IE9_01101 [Bacillus cereus BAG4X12-1]
Length = 760
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|195119542|ref|XP_002004290.1| GI19692 [Drosophila mojavensis]
gi|193909358|gb|EDW08225.1| GI19692 [Drosophila mojavensis]
Length = 819
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 269 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 326
+ AFL I+ L + N+ LS + L+ + +LE LDL+++ I ++ VG
Sbjct: 190 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLNSLERLDLANNKI--KALGTADFVGLG 247
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA--ISYMSMMPSLKFIDISN 384
NL L LSN + SS +G L LE+L L G ++ DYA + +S SL+ +D++
Sbjct: 248 NLVYLELSNNQISSISQRTFSG-LRKLEVLKLGGNRLGDYAQSLKALSQCLSLRQLDLTA 306
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 307 NNLNG-----------PLSEQTLPGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 355
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 501
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 356 NQIDVLQDHAFFGLGSLDSLDLSYNGIVAISSASLQHLTRLTVLDLTHNFLRALTSDLI 414
>gi|190410015|ref|YP_001965539.1| probable peroxidase protein [Sinorhizobium meliloti SM11]
gi|125631045|gb|ABN47046.1| probable peroxidase protein [Sinorhizobium meliloti SM11]
Length = 1174
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 185/436 (42%), Gaps = 49/436 (11%)
Query: 58 SLLEVFKHNAEAIELRGENSVDAEW--MAYLG-----AFRYLRSLNVADCRRVTSSALWA 110
S E+ A A+ R +VD W ++ G + L+ N A S A W
Sbjct: 761 SRTEITDEAAAAVFSRPRQAVDVSWTQVSQTGIVTGQSPEALQKGNFAGLDIDDSFASW- 819
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L L+E+DLS +V D L + LE+ LS T +GI L + + L+
Sbjct: 820 LRAAASLREIDLSHT-RVGDDVAGALGDLRFLEQANLSNTHTMDEGICRLMNAP-IRTLE 877
Query: 171 LGGLPVT---------DLVLRSLQVLTKLEY---------LDLWGSQVSNRGAAVLKMFP 212
+ G PV + L+S+++ + ++ LD+ + S V +
Sbjct: 878 IYGRPVAAQGLTAIAQNRTLKSVKLTSDADWTGLAEINAELDMQTPERSE--GRVPQSLR 935
Query: 213 RLSFLNLAWTGVT-KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
RLS + + + +L N +L+ L + + D+ E N K L + R
Sbjct: 936 RLSLRGMLTSSLADELGNSQNLKSLGIDSIGADAGFESNFFK--LEDFIAENAGLDDPRI 993
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
+ L + S+ + L +S + L + + L+L + + D + M+ + L +
Sbjct: 994 SVLLAKPSI-AGLYLSGNPLGKALGGPLSNTIHTLELRETQVSDAEIPMIGKL-PRLHCI 1051
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
+L +TR ++ G+ LAG NL+ L+L GTQ+D ++ M++ P L + +
Sbjct: 1052 DLPHTRVTAKGIAELAGMSVNLQSLALDGTQVDTGSVGAMALAPRLLELYL--------- 1102
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
G E D AL L L+L T +SD + L+ L LSL +A+L+D +
Sbjct: 1103 --YGDEVD--TRTIALLGSVRLRELHLLGTNISDDAVPHLAAIAGLRFLSL-DANLSDDA 1157
Query: 452 LHQLSSLSKLTNLSIR 467
L L SL +S+R
Sbjct: 1158 LLALRSLRPHLLVSLR 1173
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 46/308 (14%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA--DG------------ 156
+ G+ L L+ + + + DAG+ +L ++ +KL E GLT +G
Sbjct: 641 VKGLPHLTHLN-ANGLDLDDAGVSNLAAVG--QKLITLELGLTGPREGHQYAATQLTGSI 697
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ L +L +L L L G+PV+D L S + +L LDL G+ VS++G L +S
Sbjct: 698 VQWLEALTSLRSLSLRGIPVSDDDLNSTNLWKRLSRLDLSGTAVSDKGVTSLASAFAISE 757
Query: 217 LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 276
L+L+ T +T + ++ + +D ++S G EA +
Sbjct: 758 LSLSRTEIT---DEAAAAVFSRPRQAVD---------VSWTQVSQTGIVTGQSPEA---L 802
Query: 277 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL---NL 333
+ + LD+ +S S +L +L +DLS + +GDD VA +LR L NL
Sbjct: 803 QKGNFAGLDIDDSFAS---WLRAAASLREIDLSHTRVGDD----VAGALGDLRFLEQANL 855
Query: 334 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI-SNTDIKGFIQ 392
SNT G+ L + P + L + G + ++ ++ +LK + + S+ D G +
Sbjct: 856 SNTHTMDEGICRLM-NAP-IRTLEIYGRPVAAQGLTAIAQNRTLKSVKLTSDADWTG-LA 912
Query: 393 QVGAETDL 400
++ AE D+
Sbjct: 913 EINAELDM 920
>gi|114568006|ref|YP_755160.1| leucine-rich repeat-containing protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114338941|gb|ABI69789.1| Leucine-rich repeat (LRR) protein-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 1351
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 64/312 (20%)
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
G++H S L+ L+L+ G+T + L SL+NL LD+ +TD L L L+ L+
Sbjct: 724 GIQHFTS---LQTLYLAGNGITD--LTPLQSLRNLQYLDISNNAITD--LGPLTKLSNLQ 776
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-GVTKLPNISSLECLNLSNCTIDSILEGN 250
LD +Q+++ A L L +L+ ++ GV L + +L + L++ I I + N
Sbjct: 777 GLDFSYNQLTDIQA--LANLTDLRYLDFSYNDGVGVLEPLRNL--IGLTDLFIAGIRDSN 832
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
+ L +S +T I A L L LD+SN+ L F+ Q+ L+ +D S+
Sbjct: 833 PAQVALCSVSSNQSTDIGAILAGL----KNLENLDISNNELPDITFVNQLPNLKTIDASN 888
Query: 311 SMIGDDS-VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ I D + +E L NLE +SL I +IS
Sbjct: 889 NTIVDTTPLET-----------------------------LSNLEKVSLYNNNIT--SIS 917
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
+ +PSL+ I+IS + G Q ++ L +L +L+L +SD L
Sbjct: 918 SLVKIPSLQEINISGNQVGGISQ--------------IEQLANLTKLDLTANPISD--LT 961
Query: 430 PLSTFKELIHLS 441
PL+ ++ + ++
Sbjct: 962 PLTLLQDTVEVN 973
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 53/216 (24%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD------------------DSVEMVA 322
L +LD+SN++++ LT++ L+ LD S + + D D V ++
Sbjct: 753 LQYLDISNNAITDLGPLTKLSNLQGLDFSYNQLTDIQALANLTDLRYLDFSYNDGVGVLE 812
Query: 323 ----CVG------ANLRNLNLSNTRF------SSAGVGILAGHLPNLEILSLSGTQIDDY 366
+G A +R+ N + S +G + L NLE L +S ++ D
Sbjct: 813 PLRNLIGLTDLFIAGIRDSNPAQVALCSVSSNQSTDIGAILAGLKNLENLDISNNELPD- 871
Query: 367 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 426
I++++ +P+LK ID SN + ++ T L+ L++LE+++L ++
Sbjct: 872 -ITFVNQLPNLKTIDASN--------------NTIVDTTPLETLSNLEKVSLYNNNIT-- 914
Query: 427 TLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 461
++ L L +++ + +S + QL++L+KL
Sbjct: 915 SISSLVKIPSLQEINISGNQVGGISQIEQLANLTKL 950
>gi|293351022|ref|XP_002727661.1| PREDICTED: similar to toll-like receptor 13 [Rattus norvegicus]
gi|149055554|gb|EDM07138.1| rCG38186 [Rattus norvegicus]
Length = 956
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 184/442 (41%), Gaps = 66/442 (14%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV--KVTDAGMKHLLSISTLEKLWL 147
RY LN+ + + W+ T ++ L +L L + K+ + + L +++ L L
Sbjct: 68 RYTTHLNLTN-NYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLLN---L 123
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
E + + + L NL L L +T + + L KL+YL L +++SN +
Sbjct: 124 VENKIQSVNNSF-EGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGIL 182
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
V LP + L+ +N S +D +P + +SL +F
Sbjct: 183 --------------EAVQHLPCLEHLDLINNSIMYLD--------HSPRSLVSLTHLSF- 219
Query: 268 NEREAFLYIETSLLSFLDVSNSSLSRF-------CFLTQMKALEHLDLSSSMIGDDSVEM 320
E + S LS +++N S S+ +L + L+ L+LS +++ +EM
Sbjct: 220 -EGNNLTELNFSTLSLPNLTNLSASQNGHGVIQDVYLKTLPQLQSLNLSGTVV---KLEM 275
Query: 321 VACVG-ANLRNLNLSNTRFSSAGVGI-----LAGHLPNLEILSLSGTQIDDYAISYMSMM 374
++ N+R ++LSN + + L +LP LEIL + I ++
Sbjct: 276 LSAKHLQNVRVMDLSNRELKHGHLNMKIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKC 335
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLST 433
L F+D+ G +DLV L+ + L L+RLNL + Q+S + S+
Sbjct: 336 TRLLFLDL------------GQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSS 383
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
+ L L L + S L +L LS+ +T +F SLK L+L
Sbjct: 384 LQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAAC 443
Query: 494 WLLTED--AILQFCKMHPRIEV 513
W++T D + QF P +EV
Sbjct: 444 WIVTIDRYSFTQF----PNLEV 461
>gi|384245058|gb|EIE18554.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 731
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 201/464 (43%), Gaps = 63/464 (13%)
Query: 69 AIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTS---SALWALTGMTCLKELDLSR 124
++ L G S+ +A + A R L +L + RV + +++ A+ G+T L LDLS
Sbjct: 173 SLNLSGCVSLSERGLAAIAARLRRLHTLKLGGTSRVATISDASVAAIAGLTSLTHLDLSG 232
Query: 125 CVKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLR 182
+TDAG+ HL S+S L L L + ++ DG+A+ L ++ L L G ++D +
Sbjct: 233 SHDITDAGLLHLGSLSRLRTLVLWNCMRVSVDGLAVFRQLPAVADLSLRGCAQLSDALCG 292
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-AWTGVTKLPNISSLECLNLSNC 241
S+ L +L LDL + R + L W G +S L+ LNL C
Sbjct: 293 SVAHLEQLTRLDL-------------RACERFTGAELREWKG------LSLLQELNLKGC 333
Query: 242 TIDSILEGNENKAPLAKISL-AGTTFINEREAFLYIETSLLSFLDVSN------------ 288
A L +SL T IN +E + L + +S
Sbjct: 334 Y-------KIEDAGLQGLSLLTSLTSINMQECWQITAQGLAALSGLSRMMDVNLQGCRKI 386
Query: 289 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILA 347
SSL L+++ AL + +GD S+ ++ + +LR+L+LS T + G+
Sbjct: 387 SSLEPLASLSRLAALNLRNCDG--LGDSSLGPLSRL-VSLRSLDLSGCTHLTGRGL---- 439
Query: 348 GHLPNLEILSLSGTQIDDYAISYMS--MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 405
LP + L+ ++ A S + P +S ++ G Q+ GA + +LT
Sbjct: 440 --LPLSSLTGLTALKLQHCAGIRRSADLAPLSLLTALSTLNLSGCSQEEGAGISSLATLT 497
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNL 464
L+ L+ L+ D L L++ + + L+L+ SLTDV L + ++ LTN+
Sbjct: 498 CLRALS-LD--GWRHVTFIDDGLMALTSLRGVASLNLQGCTSLTDVGLAAIGHMTSLTNV 554
Query: 465 SIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 507
+++D +T G + L L L ++++ ++
Sbjct: 555 NLQDCRQITGEGFAGWAGMAHLTSLSLQNASMVSDAGCCAIARI 598
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
++ L+G S+ +A +G L ++N+ DCR++T GM L L L V
Sbjct: 528 SLNLQGCTSLTDVGLAAIGHMTSLTNVNLQDCRQITGEGFAGWAGMAHLTSLSLQNASMV 587
Query: 129 TDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQV 186
+DAG + I++L L L LT D +A L+ L+ L L L G ++D L
Sbjct: 588 SDAGCCAIARITSLRTLNLKNCPALTDDCLAALTPLERLCHLRLQGNQQLSDAALAHCAR 647
Query: 187 LTKLEYLD 194
+ L++L+
Sbjct: 648 MPSLQHLE 655
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 180/430 (41%), Gaps = 92/430 (21%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
FP+L + +++ V + +A L L S+ +A C VT L L+ ++
Sbjct: 93 FPAL--------QQLDMSACRRVSNDELANLRHLPNLTSVVLAGCEDVTDEGLLHLSHLS 144
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSS-LQNLSVLDLGG 173
L L+LS C KVTD G+ L ++ L L LS L+ G+A +++ L+ L L LGG
Sbjct: 145 RLASLNLSNCCKVTDGGLLALAALRQLGSLNLSGCVSLSERGLAAIAARLRRLHTLKLGG 204
Query: 174 L----PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
++D + ++ LT L +LDL GS ++ G+ L +
Sbjct: 205 TSRVATISDASVAAIAGLTSLTHLDLSGSH------------------DITDAGLLHLGS 246
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
+S L L L NC ++S+ G + A + SL +S++
Sbjct: 247 LSRLRTLVLWNCM---------------RVSVDGLAVFRQLPAV--ADLSLRGCAQLSDA 289
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
L Q+ L ++ AC RF+ A + G
Sbjct: 290 LCGSVAHLEQLTRL---------------DLRAC------------ERFTGAELREWKG- 321
Query: 350 LPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
L L+ L+L G +I+D + +S++ SL I++ Q+ A+ L AL
Sbjct: 322 LSLLQELNLKGCYKIEDAGLQGLSLLTSLTSINMQE------CWQITAQ-----GLAALS 370
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR 467
L+ + +NL+ + ++L PL++ L L+LRN L D SL LS L L +L +
Sbjct: 371 GLSRMMDVNLQGCR-KISSLEPLASLSRLAALNLRNCDGLGDSSLGPLSRLVSLRSLDLS 429
Query: 468 DAV-LTNSGL 476
LT GL
Sbjct: 430 GCTHLTGRGL 439
>gi|170757260|ref|YP_001781332.1| hypothetical protein CLD_2856 [Clostridium botulinum B1 str. Okra]
gi|169122472|gb|ACA46308.1| leucine rich repeat protein [Clostridium botulinum B1 str. Okra]
Length = 1359
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 185/415 (44%), Gaps = 71/415 (17%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+ + +KELD G++++ + LEKL LS T + I+LL L NL +++
Sbjct: 352 SDLENIKELDFHNTHIEKLNGIENM---TALEKLNLSGTDIKD--ISLLKYLTNLREVNI 406
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
++D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++
Sbjct: 407 SNTSISDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLN 462
Query: 232 SLECLNLSNC--TIDSILEGNENK---APLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
SL L+LSNC T ++ L N + L+ I + G +NE + L +L +
Sbjct: 463 SLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQG-NLLNEINNISIL--GKLEYLSI 519
Query: 287 SNSSLSRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVACV-GANLRN 330
+N+++ L + L LD++ +IG++ V V +R
Sbjct: 520 ANTNVVNIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIRE 579
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L ++ I L ++ L LSG I D + + M +L ++D+SN +I
Sbjct: 580 L------INNYSEPIYKRQLLSITKLELSGRGIVD--LQGLESMENLIYLDLSNNEISNI 631
Query: 391 --IQQVGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
I+++ LVL S+ +++L LE L+L + D T L +L L L
Sbjct: 632 DSIKKLINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGDIT--ALGGLSQLTRLDL 689
Query: 443 -RNASLTDVSLHQL-----------------SSLSKLTNLSIRDAVLTNSGLGSF 479
RN ++ SL L SL KL NL R+ L NSG+ +F
Sbjct: 690 SRNGIVSINSLGGLINLQYLSLYENKISEREESLKKLYNL--RELYLKNSGISNF 742
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 199/428 (46%), Gaps = 68/428 (15%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+EL G VD + + + YL D S + ++ + LK+L L + K+
Sbjct: 598 KLELSGRGIVDLQGLESMENLIYL------DLSNNEISNIDSIKKLINLKKLVLHKN-KI 650
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+K + S++ LE+L LS L D I L L L+ LDL + + + SL L
Sbjct: 651 --GSIKVIESLTKLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSINSLGGLI 704
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTID 244
L+YL L+ +++S R ++ K++ L L L +G++ L ++LE + + + D
Sbjct: 705 NLQYLSLYENKISEREESLKKLY-NLRELYLKNSGISNFDVTLAYYNNLEKKDFTTNS-D 762
Query: 245 SILEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
I+ + + LAKI + G +E E ++ +D+S ++S+ +++
Sbjct: 763 FIVFDEKLDSDLAKIIREILGK---DENTNIYKSEVDTITDIDLSEDTISKLNISSKL-- 817
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILS 357
++++I D ++ + NL ++NL G G L G L L L
Sbjct: 818 -----TNTNIINLDGIQYFS----NLHSINL-------RGHGKLEGLENLMPLRGLIKLD 861
Query: 358 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
L G +++ ++ Y++ + SLK++ ++N ++ G L+ L+NL L L+
Sbjct: 862 LQGREVNYISLYYINYLTSLKYLYLNNMNLTG-------------DLSFLENLTDLRVLD 908
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 477
L +T +S+ ++ LS + L L L +TD LS L LTNL I+ ++ N+ +
Sbjct: 909 LSRTGISNISI--LSKLRNLNELYLGGNKITD-----LSYLENLTNL-IKLDLVGNNDIT 960
Query: 478 SFKPPRSL 485
S R+L
Sbjct: 961 SIYALRNL 968
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 134/569 (23%), Positives = 221/569 (38%), Gaps = 140/569 (24%)
Query: 36 RLPAHLADSLLRHLIRRRL------IFPSLLEVFK----HNA--------------EAIE 71
+P D + L+R+ + ++PS LE K HN E +
Sbjct: 324 NIPIEFKDKVFEELVRKEINKPSGYVYPSDLENIKELDFHNTHIEKLNGIENMTALEKLN 383
Query: 72 LRGENSVDAEWMAYLGAFR-------------------YLRSLNVADCR----------- 101
L G + D + YL R Y+R LN+
Sbjct: 384 LSGTDIKDISLLKYLTNLREVNISNTSISDITALESSIYIRYLNLNKTEITTLEVIKKFE 443
Query: 102 -----RVTSSALWALTGMTCLKELDLSRC----------------------VKVTDAGMK 134
V+ + + + + L ELDLS C +K+ +
Sbjct: 444 HIEKLYVSGTKISTIPNLNSLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQGNLLN 503
Query: 135 HLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ +IS L KL +LS I +L SL NL LD+ G D QVL L +
Sbjct: 504 EINNISILGKLEYLSIANTNVVNIDVLRSLVNLRKLDITGCTKID-----TQVLNHLSDV 558
Query: 194 DLWGSQVSNRGAAVLK-------------MFPR----LSFLNLAWTGVTKLPNISSLE-- 234
++ G+++ G VL+ ++ R ++ L L+ G+ L + S+E
Sbjct: 559 EIIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLLSITKLELSGRGIVDLQGLESMENL 618
Query: 235 -CLNLSN---CTIDSILE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
L+LSN IDSI + N K L K + I E+ +E LD+SN+
Sbjct: 619 IYLDLSNNEISNIDSIKKLINLKKLVLHKNKIGSIKVI---ESLTKLEE-----LDLSNN 670
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAG 348
+ L + L LDLS + I V + + G NL+ L+L + S +
Sbjct: 671 LIGDITALGGLSQLTRLDLSRNGI----VSINSLGGLINLQYLSLYENKISEREESL--K 724
Query: 349 HLPNLEILSLSGTQIDDYAIS--YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
L NL L L + I ++ ++ Y + + F +N+D F +++ ++DL +
Sbjct: 725 KLYNLRELYLKNSGISNFDVTLAYYNNLEKKDF--TTNSDFIVFDEKL--DSDLAKIIRE 780
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLS--TFKEL-IHLSLRNASLTDVSLHQLSSLSKLTN 463
+ L E N+ +++V T LS T +L I L N ++ ++L + S L +
Sbjct: 781 I--LGKDENTNIYKSEVDTITDIDLSEDTISKLNISSKLTNTNI--INLDGIQYFSNLHS 836
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+++R GL + P R L LDL G
Sbjct: 837 INLRGHGKL-EGLENLMPLRGLIKLDLQG 864
>gi|72393081|ref|XP_847341.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176644|gb|AAX70748.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70803371|gb|AAZ13275.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1188
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 177/423 (41%), Gaps = 80/423 (18%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-LEKLWLSETGLTADG 156
A C VTS+ L L MTCL +L+LS +T LL ST L +L LS T +T+DG
Sbjct: 597 ARCSSVTSAGLSGLDKMTCLSKLNLS----LTPVTSVSLLGGSTSLMELNLSGTAVTSDG 652
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK---LEYLDLWGSQVSNRGAAVLKMFPR 213
+ L + +L+ L+L V +SLQ + + LE L+L+ +V ++ PR
Sbjct: 653 LLGLEKIPSLTTLNLSRTKV-----KSLQKIAESQTLENLNLYSCRVDTSDVRGVECMPR 707
Query: 214 LSFLNLAWTGVTKLPNISSL--------ECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
L L+ + T V+ L +SS + L L NC I EG +K +++G
Sbjct: 708 LKSLDFSTTKVSDLSFLSSSPSLKTLRAQWLTLRNC--GGITEGR-----YSKRNISGG- 759
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRF-CFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+T L F + N + F C+ K D VE C
Sbjct: 760 -----------DTKLFDF--IGNIRGNNFPCWEDPGKE------------DQDVEAGVCG 794
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
A + L + +SS ++E + L T IDD I + + +LK + I+N
Sbjct: 795 LAKIPTLEFVDLSYSSVSSVRSLFSSKSIETIVLRRTPIDDNGIKDIGQLQTLKTLVINN 854
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
+ I + G E NL +T+ L + + + +
Sbjct: 855 --LGDLISEGGDE-------------------NLSETK---GVLVSVKDITLAFGMVILD 890
Query: 445 ASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 503
S TDV L ++SL L L + + ++T G+ + SL+LLD+ +L+ D + +
Sbjct: 891 LSFTDVYDLRMITSLKCLKELYLVETLITVDGIRGVEQLPSLRLLDISQTSVLSLDFLSE 950
Query: 504 FCK 506
CK
Sbjct: 951 GCK 953
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L R LR + + ++++ + L + L+ LDLS C +++D ++ L+S S+L
Sbjct: 1054 VTFLARSRSLRRIVLGRSSNLSNNGIGGLAQIPTLEALDLSFCARISD--VRPLVSSSSL 1111
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
++L L TG+TA G+ ++ L +LD+ G P D
Sbjct: 1112 QELRLVGTGVTAVGLHGALQMKALKLLDVTGTPAAD 1147
>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
Length = 1295
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 180/396 (45%), Gaps = 71/396 (17%)
Query: 108 LW-ALTGMTCLKELDLSRC---VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL 163
LW + + LK++DLSRC V+V D L + LE+L LS + + +L
Sbjct: 618 LWDGIQPLRNLKKMDLSRCKYLVEVPD-----LSKATNLEELNLSYCQSLVEVTPSIKNL 672
Query: 164 QNLSV------LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF- 216
+ LS + L +P+ ++L+SL+ V G + LK FP +S+
Sbjct: 673 KGLSCFYLTNCIQLKDIPIG-IILKSLET-------------VGMSGCSSLKHFPEISWN 718
Query: 217 ---LNLAWTGVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTT 265
L L+ T + +LP+ IS L CL ++S+C T+ S L + L ++L G
Sbjct: 719 TRRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCR 775
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
+ L TSL + L+VS L+ F ++E L +S + I + + C
Sbjct: 776 RLENLPDTLQNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNL 831
Query: 326 ANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDIS 383
+ LR+L++S N R +S V I L +LE L LSG + + + + M L++ D+
Sbjct: 832 SQLRSLDISENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLD 889
Query: 384 NTDIKGFIQQVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF---- 429
T IK + +G + T + + ++ L L+ L + + + L
Sbjct: 890 RTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLC 949
Query: 430 -PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
PLS F +L LSL N ++T++ +S+ L NL
Sbjct: 950 PPLSRFDDLRALSLSNMNMTEIP----NSIGNLWNL 981
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-L 142
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +ST +
Sbjct: 758 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNE-----FPRVSTSI 811
Query: 143 EKLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWG 197
E L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 812 EVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------ 864
Query: 198 SQVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 865 ------GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 916
>gi|206967881|ref|ZP_03228837.1| putative internalin [Bacillus cereus AH1134]
gi|206736801|gb|EDZ53948.1| putative internalin [Bacillus cereus AH1134]
Length = 760
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|442624469|ref|NP_001261138.1| partner of paired, isoform B [Drosophila melanogaster]
gi|440214583|gb|AGB93669.1| partner of paired, isoform B [Drosophila melanogaster]
Length = 562
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 348 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 407
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 408 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 467
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ +L L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 468 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 527
Query: 215 SFLNLA 220
LNL
Sbjct: 528 QKLNLG 533
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 138/330 (41%), Gaps = 70/330 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SLN++ C V L + LK LDLS C ++TD +
Sbjct: 236 LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGR-------------- 281
Query: 150 TGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDL---WGSQVSNR 203
+ L+NL L+LGG + T L+L + L KL++L+L W +S++
Sbjct: 282 ---------IAQHLRNLETLELGGCCNITNTGLLLIAWG-LKKLKHLNLRSCW--HISDQ 329
Query: 204 GAAVLKMFPRLSF---LNLAWTGVTKLPNIS------------SLECLNLSNC--TIDSI 246
G L F R + L L + G+ +S SL+ +NLS C DS
Sbjct: 330 GIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSG 389
Query: 247 LEGNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+ L +++L I++ A+L S ++ LDVS FC +AL H
Sbjct: 390 LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVS------FCDKISDQALTH 443
Query: 306 ----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 354
L L+ I D + +A L NLN+ +R + G+ LA L NL+
Sbjct: 444 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 503
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G TQ+ I + +P L+ +++
Sbjct: 504 TIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 533
>gi|170758807|ref|YP_001788425.1| internalin [Clostridium botulinum A3 str. Loch Maree]
gi|169405796|gb|ACA54207.1| leucine-rich repeat protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 364
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 44/271 (16%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT---A 154
++ +V A+ G L+++ + + ++ G+++L I L L L E LT
Sbjct: 58 SNLEKVIRLAIRKPIGKLRLRDVVDIKKLDASNKGIQNLDGIENL--LRLQELDLTDNEI 115
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
D I+ L+SL+++S+L LG +TD+ SL+ +KL+ L L+ ++V + LK F ++
Sbjct: 116 DDISTLNSLKDISILKLGKNKITDIA--SLKNCSKLKELYLFDNKVID--ITPLKNFEKI 171
Query: 215 SFLNLAWTGVTK---LPNISSLECLNLSNCTI---DSILEGNENKAPLAKISLAGTTF-- 266
L+L V LP + +L+ + L N + + IL + L ++LAG F
Sbjct: 172 YILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILRMQQ----LTTVNLAGNNFTD 227
Query: 267 ---INEREAF--LYI------------ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
IN+ ++ LYI S L LDVSN+ ++ ++ + +E L++S
Sbjct: 228 MKNINQLKSLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNIS 287
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
S+ I D + N +NL+ + R+++
Sbjct: 288 SNNIRD------IKILENFKNLSKVDLRYNN 312
>gi|108864517|gb|ABA94272.2| Leucine Rich Repeat family protein, expressed [Oryza sativa
Japonica Group]
gi|215686810|dbj|BAG89660.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 630
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 147 LSETGLTA-DG--IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
LS LT DG ++SL+NL LDL GL T +V L L+KLE+LDL G+ + +
Sbjct: 85 LSNNNLTGPDGRFPVFVASLRNLQYLDLSGLGFTGMVPYQLGNLSKLEFLDLSGTGMQSA 144
Query: 204 GAAVLKMFPRLSFLNLA---------WTGVTKLPNISSLECLNLSNCT---IDSILEGNE 251
+ L L +L L+ W V I SL L+LS C+ +D L+ +
Sbjct: 145 DISWLTRLQWLKYLYLSSVNLSAISDWAHVVN--KIPSLTVLSLSGCSLTRVDHSLK-HV 201
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQMKALEHLDLS 309
N L K+ L+G F + + + L +LD+ ++ L RF +T M +L+ LD S
Sbjct: 202 NLTRLEKLHLSGNDFSHPLSSCWFWILKTLIYLDLESTGLYGRFPNAITNMTSLQVLDFS 261
Query: 310 SS-------------------------MIGDDSVEMVA----CVGANLRNLNLSNTRFSS 340
+ ++ + E++ C LR L LSN +
Sbjct: 262 RNNNAGILEPILLRNLCNLESLNLQLGLLSGNMTELLESLSHCSPNKLRKLYLSNNNITG 321
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
G +L + S Q+ + + + SL +D+S + G I
Sbjct: 322 TLPAQSMGQFTSLANIGFSFNQLTGHVPPEIGKLASLTHLDLSENKLTGTI 372
>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
thaliana]
gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
thaliana]
Length = 1294
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 180/396 (45%), Gaps = 71/396 (17%)
Query: 108 LW-ALTGMTCLKELDLSRC---VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL 163
LW + + LK++DLSRC V+V D L + LE+L LS + + +L
Sbjct: 617 LWDGIQPLRNLKKMDLSRCKYLVEVPD-----LSKATNLEELNLSYCQSLVEVTPSIKNL 671
Query: 164 QNLSV------LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF- 216
+ LS + L +P+ ++L+SL+ V G + LK FP +S+
Sbjct: 672 KGLSCFYLTNCIQLKDIPIG-IILKSLET-------------VGMSGCSSLKHFPEISWN 717
Query: 217 ---LNLAWTGVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTT 265
L L+ T + +LP+ IS L CL ++S+C T+ S L + L ++L G
Sbjct: 718 TRRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCR 774
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
+ L TSL + L+VS L+ F ++E L +S + I + + C
Sbjct: 775 RLENLPDTLQNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNL 830
Query: 326 ANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDIS 383
+ LR+L++S N R +S V I L +LE L LSG + + + + M L++ D+
Sbjct: 831 SQLRSLDISENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLD 888
Query: 384 NTDIKGFIQQVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF---- 429
T IK + +G + T + + ++ L L+ L + + + L
Sbjct: 889 RTSIKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLC 948
Query: 430 -PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
PLS F +L LSL N ++T++ +S+ L NL
Sbjct: 949 PPLSRFDDLRALSLSNMNMTEIP----NSIGNLWNL 980
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-L 142
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +ST +
Sbjct: 757 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNE-----FPRVSTSI 810
Query: 143 EKLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWG 197
E L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 811 EVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------ 863
Query: 198 SQVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 864 ------GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 915
>gi|423414880|ref|ZP_17392000.1| hypothetical protein IE1_04184 [Bacillus cereus BAG3O-2]
gi|423429338|ref|ZP_17406342.1| hypothetical protein IE7_01154 [Bacillus cereus BAG4O-1]
gi|401097800|gb|EJQ05822.1| hypothetical protein IE1_04184 [Bacillus cereus BAG3O-2]
gi|401121644|gb|EJQ29433.1| hypothetical protein IE7_01154 [Bacillus cereus BAG4O-1]
Length = 760
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L + D VLT
Sbjct: 368 KALYSLPLTDLVLT 381
>gi|219519351|gb|AAI45293.1| F-box and leucine-rich repeat protein 13 [Mus musculus]
Length = 745
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 73/311 (23%)
Query: 68 EAIELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
+ I G + DA + + + + + + DC+ +T S+L +L+ + L L+L+ C+
Sbjct: 409 KKIRFEGNKRISDACFKSIDRNYPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCI 468
Query: 127 KVTDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLV 180
++ D G+KH L +L L+ L D I L NL L+L +TDL
Sbjct: 469 RIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLA 528
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
+ + + L +DL G+ +SN G +L KL +S +C+N+++
Sbjct: 529 IEYIASMLSLISVDLSGTLISNEGMTILSRH-------------RKLREVSVSDCVNITD 575
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
I + Y +TSLL
Sbjct: 576 FGIRA-----------------------------YCKTSLL------------------- 587
Query: 301 KALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 358
LEHLD+S S + DD ++ +A + +LN++ + + AG+ IL+ L IL +
Sbjct: 588 --LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLHILDI 645
Query: 359 SGT-QIDDYAI 368
SG Q+ D I
Sbjct: 646 SGCIQLTDQII 656
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 37/305 (12%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLT 153
LN C T + L A++ L+EL++S C TD M+H+ + L LS T +T
Sbjct: 265 LNFRGCDFRTKT-LKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNTTIT 323
Query: 154 ADGIALL----SSLQNLSVLDLGGLPVTDLVLRSLQV---LTKLEYLDLWGSQVSNRGAA 206
+ LL +LQNLS+ TD L+ L + KL YLDL G
Sbjct: 324 NRTMRLLPRYFHNLQNLSLAYCRKF--TDKGLQYLNLGNGCHKLIYLDLSGCT-----QV 376
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTT 265
+++ PR+S + L + P+IS LS+C + I EGN+ +IS A
Sbjct: 377 LVEKCPRISSVVLIGS-----PHISDSAFKALSSCDLKKIRFEGNK------RISDACFK 425
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--A 322
I+ Y + + +D + S L+ +K L L+L++ + IGD ++
Sbjct: 426 SIDRN----YPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDG 481
Query: 323 CVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFI 380
LR LNL+N + V L+ PNL L+L + + D AI Y++ M SL +
Sbjct: 482 PASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISV 541
Query: 381 DISNT 385
D+S T
Sbjct: 542 DLSGT 546
>gi|297808737|ref|XP_002872252.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318089|gb|EFH48511.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 177/419 (42%), Gaps = 45/419 (10%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSET 150
L ++V+ C AL+ L+EL + +C+ ++D G+ ++ S L K+ L
Sbjct: 123 LERVDVSHCWGFGDREAAALSSAVGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWC 182
Query: 151 GLTAD-GIALLSSL-QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+D GI LL + + L LD+ L +T+ +RS+ +L KLE LD+ + +
Sbjct: 183 MEISDLGIDLLCKMCKGLKSLDVSYLKITNDSIRSIALLLKLEVLDMVSCPLIDDAG--- 239
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK---ISLAGTT 265
L FL G L + C +S + SI+ G+ + L +S +
Sbjct: 240 -----LQFLE---NGSPSLQEVDVTRCERVSLSGLISIVRGHPDIQLLKASHCVSEVSGS 291
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACV 324
F+ +A +++T + VS+SSL + ++L + LS + + D + A
Sbjct: 292 FLQYIKALKHLKTIWIDGAHVSDSSLVT--LSSSCRSLVEIGLSRCVDVTDIGMMGFARN 349
Query: 325 GANLRNLNLSNTRF-SSAGVGILAGHLPNLEILSLSGTQ-IDDYAI----SYMSMMPSLK 378
NL+ LNL+ F + + +A NLE L L I + + Y ++ L
Sbjct: 350 CLNLKTLNLACCGFVTDVAISAVAQSCRNLETLKLESCHLITEKGLQSLGCYSKLLQELD 409
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE-QTQVSDATLFPL-STFKE 436
D + +G L + ++L+RL L T +SD +F + S +
Sbjct: 410 LTDCYGVNDRG--------------LEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSK 455
Query: 437 LIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAV--LTNSGLGSFKPPRSLKLLDLHG 492
L+ L L R A D L LS K N I LT++G+ + L L+L G
Sbjct: 456 LLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELRG 514
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 45/314 (14%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGM-- 133
V ++ Y+ A ++L+++ + D V+ S+L L+ +C L E+ LSRCV VTD GM
Sbjct: 288 VSGSFLQYIKALKHLKTIWI-DGAHVSDSSLVTLSS-SCRSLVEIGLSRCVDVTDIGMMG 345
Query: 134 --KHLLSISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSL---- 184
++ L++ TL L+ G D A+ S +NL L L +T+ L+SL
Sbjct: 346 FARNCLNLKTLN---LACCGFVTDVAISAVAQSCRNLETLKLESCHLITEKGLQSLGCYS 402
Query: 185 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL------NLAWTGV-------TKLPNIS 231
++L +L+ D +G V++RG + L L N++ G+ +KL +
Sbjct: 403 KLLQELDLTDCYG--VNDRGLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELD 460
Query: 232 SLECLNLSNCTIDSILEGNENKAPL-----AKISLAGTTFINEREAFLYIE-TSLLSFLD 285
C + + ++ G ++ L +++ G I + E ++E L +
Sbjct: 461 LYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELRGLKNITG 520
Query: 286 VSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
V ++++ C K L +LDL I D +A NLR +NL N S +
Sbjct: 521 VGLAAIACGC-----KKLGYLDLKLCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALC 575
Query: 345 ILAGHLPNLEILSL 358
+L +L ++ + L
Sbjct: 576 MLMSNLSRVQDVDL 589
>gi|261330569|emb|CBH13553.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 1188
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 177/423 (41%), Gaps = 80/423 (18%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-LEKLWLSETGLTADG 156
A C VTS+ L L MTCL +L+LS +T LL ST L +L LS T +T+DG
Sbjct: 597 ARCSSVTSAGLSGLDKMTCLSKLNLS----LTPVTSVSLLGGSTSLMELNLSGTAVTSDG 652
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK---LEYLDLWGSQVSNRGAAVLKMFPR 213
+ L + +L+ L+L V +SLQ + + LE L+L+ +V ++ PR
Sbjct: 653 LLGLEKIPSLTTLNLSRTKV-----KSLQKIAESQTLENLNLYSCRVDTSDVRGVECMPR 707
Query: 214 LSFLNLAWTGVTKLPNISSL--------ECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
L L+ + T V+ L +SS + L L NC I EG +K +++G
Sbjct: 708 LKSLDFSTTKVSDLSFLSSSPSLKTLRAQWLTLRNC--GGITEGR-----YSKRNISGG- 759
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRF-CFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+T L F + N + F C+ K D VE C
Sbjct: 760 -----------DTKLFDF--IGNIRGNNFPCWEDPGKE------------DQDVEAGVCG 794
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
A + L + +SS ++E + L T IDD I + + +LK + I+N
Sbjct: 795 LAKIPTLEFVDLSYSSVSSVRSLFSSKSIETIVLRRTPIDDNGIKDIGQLQTLKTLVINN 854
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
+ I + G E NL +T+ L + + + +
Sbjct: 855 --LGDLISEGGDE-------------------NLSETK---GVLVSVKDITLAFGMVILD 890
Query: 445 ASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 503
S TDV L ++SL L L + + ++T G+ + SL+LLD+ +L+ D + +
Sbjct: 891 LSFTDVYDLRMITSLKCLKELYLVETLITVDGVRGVEQLPSLRLLDISQTSVLSLDFLSE 950
Query: 504 FCK 506
CK
Sbjct: 951 GCK 953
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
+ +L R LR + + ++++ + L + L+ LDLS C +++D ++ L+S S+L
Sbjct: 1054 VTFLARSRSLRRIVLGRSSNLSNNGIGGLAQIPTLEALDLSFCPRISD--VRPLVSSSSL 1111
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
++L L TG+TA G+ ++ L +LD+ G P D
Sbjct: 1112 QELRLVGTGVTAVGLHGALQMKALKLLDVTGTPAAD 1147
>gi|168181796|ref|ZP_02616460.1| putative internalin [Clostridium botulinum Bf]
gi|226950534|ref|YP_002805625.1| putative internalin [Clostridium botulinum A2 str. Kyoto]
gi|237796560|ref|YP_002864112.1| putative internalin [Clostridium botulinum Ba4 str. 657]
gi|182674967|gb|EDT86928.1| putative internalin [Clostridium botulinum Bf]
gi|226841706|gb|ACO84372.1| putative internalin [Clostridium botulinum A2 str. Kyoto]
gi|229263727|gb|ACQ54760.1| leucine-rich repeat protein [Clostridium botulinum Ba4 str. 657]
Length = 364
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 44/271 (16%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT---A 154
++ +V A+ G L+++ + + ++ G+++L I L L L E LT
Sbjct: 58 SNLEKVIRLAIRKPIGKLRLRDVVDIKKLDASNKGIQNLDGIENL--LRLQELDLTDNEI 115
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
D I+ LSSL+++S+L LG +TD+ SL+ +KL+ L L+ ++V + LK F ++
Sbjct: 116 DDISALSSLKDISILKLGKNKITDIA--SLKNCSKLKELYLFDNKVID--ITPLKNFEKI 171
Query: 215 SFLNLAWTGVTK---LPNISSLECLNLSNCTI---DSILEGNENKAPLAKISLAGTTF-- 266
L+L V LP + +L+ + L N + + IL+ + L ++LAG F
Sbjct: 172 YILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILKMQQ----LTTVNLAGNNFTD 227
Query: 267 ---INEREAF--LYIETS------------LLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
IN+ + LYI + L LDVSN+ ++ ++ + +E L++S
Sbjct: 228 MKDINQLKNLIELYIGDNGIKDLTFLKSMPNLKVLDVSNNKITDINSISNLNGIEELNIS 287
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
S+ I D + N +NL+ + R+++
Sbjct: 288 SNYIRD------IKILENFKNLSKVDLRYNN 312
>gi|421877770|ref|ZP_16309310.1| Internalin F [Leuconostoc citreum LBAE C10]
gi|421879575|ref|ZP_16311039.1| Internalin F [Leuconostoc citreum LBAE C11]
gi|372556467|emb|CCF25430.1| Internalin F [Leuconostoc citreum LBAE C10]
gi|390446546|emb|CCF27159.1| Internalin F [Leuconostoc citreum LBAE C11]
Length = 672
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 152/354 (42%), Gaps = 91/354 (25%)
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
++Q ++ L+L VT+L + L+ T L+ LDL GS +S+ L+ +L+ LNL
Sbjct: 65 NIQTITSLNLSYENVTNL--KGLEYATNLQSLDLSGSNISDLTP--LQNLHQLTVLNLRL 120
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SL 280
+ P+++ +E L L ++L + N + I +
Sbjct: 121 NKASIPPDLAPIENL------------------KLQSLNLFADDYGNYVSRIMPIRNMTT 162
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
LS LD+ +++L+ + +K L +L LS + NL+NL+
Sbjct: 163 LSSLDLGDNALNDLNIIHNLKNLTYLSLSKN---------------NLQNLD-------- 199
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET-- 398
G+ + N+E L L ++ + I +S M LK++ + + + T
Sbjct: 200 ---GL--SQISNIETLRLEYNKLSN--IDQLSKMKHLKYLSLGDNSVSDLTPLKNISTLQ 252
Query: 399 -------------------------------DLVLSLTALQNLNHLERLNLEQTQVSDAT 427
D + SLTAL NL +L++L+ +T VSD
Sbjct: 253 ELTLSQMSLTNTNLNSLSNLSNLTKLSIDFNDKITSLTALTNLTNLQQLDFSKTSVSD-- 310
Query: 428 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS-IRDAVLTNSGLGSFK 480
L P+S+ K L +LS NAS++D+S L SL+ LT L+ +R+ + S L K
Sbjct: 311 LSPVSSLKNLTNLSFSNASVSDIS--PLRSLNNLTTLNMLRNHIYDISPLAQLK 362
>gi|270010132|gb|EFA06580.1| hypothetical protein TcasGA2_TC009492 [Tribolium castaneum]
Length = 474
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 22/168 (13%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL---- 147
L L + DC++++ AL TG+T L ++LS CV +TD+G+KHL ++ L +L L
Sbjct: 285 LEHLGLQDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHLAKMTNLRELNLRSCD 344
Query: 148 --SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVSN 202
S+TG+ A+G + +SSL ++S D + D L + Q L L L + Q+S+
Sbjct: 345 NISDTGMAFLAEGGSRISSL-DVSFCD----KIGDQALVHISQGLFNLRNLLMSACQLSD 399
Query: 203 RG-AAVLKMFPRLSFLNLAWT------GVTKLP-NISSLECLNLSNCT 242
G A + L LN+ G+T + ++ L+C++L CT
Sbjct: 400 EGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDLYGCT 447
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 42/212 (19%)
Query: 40 HLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVAD 99
H+ D ++HL PSL E + L+ + E + + L S+N++
Sbjct: 269 HVGDQGIQHLASGN---PSL--------EHLGLQDCQKLSDEALKHATGLTSLISINLSF 317
Query: 100 CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM-----------------------KHL 136
C +T S L L MT L+EL+L C ++D GM + L
Sbjct: 318 CVSITDSGLKHLAKMTNLRELNLRSCDNISDTGMAFLAEGGSRISSLDVSFCDKIGDQAL 377
Query: 137 LSIS----TLEKLWLSETGLTADGIA-LLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTK 189
+ IS L L +S L+ +G+A + +SL +L L++G VTD L ++ + L +
Sbjct: 378 VHISQGLFNLRNLLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLR 437
Query: 190 LEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
L+ +DL+G ++++ G + P+LS LNL
Sbjct: 438 LKCIDLYGCTRITTVGLERIMKLPQLSVLNLG 469
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 128/294 (43%), Gaps = 44/294 (14%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSIS--TLEKLWLSETGLTADG--IALLSSLQN 165
+ G+ L+ L+L C V D G+ H TL +L LS D + L+N
Sbjct: 173 VIQGIPNLESLNLRGCYNVGDVGISHAFVADSPTLTELDLSLCKQVTDTSLTRIAQHLKN 232
Query: 166 LSVLDLGGLP-VTD----LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF-PRLSFLNL 219
L VL+LGG VT+ L+ L+ L +L W V ++G L P L L L
Sbjct: 233 LEVLELGGCSNVTNSGLMLIAWGLKKLKRLNLRSCW--HVGDQGIQHLASGNPSLEHLGL 290
Query: 220 ------AWTGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINERE 271
+ + ++SL +NLS C DS L+ L +++L I++
Sbjct: 291 QDCQKLSDEALKHATGLTSLISINLSFCVSITDSGLKHLAKMTNLRELNLRSCDNISDTG 350
Query: 272 -AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
AFL S +S LDVS FC IGD ++ ++ NLRN
Sbjct: 351 MAFLAEGGSRISSLDVS------FC---------------DKIGDQALVHISQGLFNLRN 389
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMS-MMPSLKFIDI 382
L +S + S G+ +A L +LE L++ +++ D ++ ++ + LK ID+
Sbjct: 390 LLMSACQLSDEGLAKIANSLHDLETLNIGQCSRVTDKGLTTIAESLLRLKCIDL 443
>gi|170758424|ref|YP_001787104.1| hypothetical protein CLK_1164 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405413|gb|ACA53824.1| leucine rich repeat protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 1359
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 185/415 (44%), Gaps = 71/415 (17%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+ + +KELD G++++ + LEKL LS T + I+LL L NL +++
Sbjct: 352 SDLENIKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIKD--ISLLKYLTNLREVNI 406
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
++D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++
Sbjct: 407 SNTSISDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLN 462
Query: 232 SLECLNLSNC--TIDSILEGNENK---APLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
SL L+LSNC T ++ L N + L+ I + G +NE + L +L +
Sbjct: 463 SLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQG-NLLNEINNISIL--GKLEYLSI 519
Query: 287 SNSSLSRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVACV-GANLRN 330
+N+++ L + L LD++ +IG++ V V +R
Sbjct: 520 ANTNVVNIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIRE 579
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L ++ I L ++ L LSG I D + + M +L ++D+SN +I
Sbjct: 580 L------INNYSEPIYKRQLLSITKLELSGRGIVD--LQGLESMENLIYLDLSNNEISNI 631
Query: 391 --IQQVGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
I+++ LVL S+ +++L LE L+L + D T L +L L L
Sbjct: 632 DSIKKLINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGDIT--ALGGLSQLTRLDL 689
Query: 443 -RNASLTDVSLHQL-----------------SSLSKLTNLSIRDAVLTNSGLGSF 479
RN ++ SL L SL KL NL R+ L NSG+ +F
Sbjct: 690 SRNGIVSINSLGGLINLQYLSLYENKISEREESLKKLYNL--RELYLKNSGVSNF 742
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 199/428 (46%), Gaps = 68/428 (15%)
Query: 69 AIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKV 128
+EL G VD + + + YL D S + ++ + LK+L L + K+
Sbjct: 598 KLELSGRGIVDLQGLESMENLIYL------DLSNNEISNIDSIKKLINLKKLVLHKN-KI 650
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
+K + S++ LE+L LS L D I L L L+ LDL + + + SL L
Sbjct: 651 --GSIKVIESLTKLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSINSLGGLI 704
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTID 244
L+YL L+ +++S R ++ K++ L L L +GV+ L ++LE + + + D
Sbjct: 705 NLQYLSLYENKISEREESLKKLY-NLRELYLKNSGVSNFDVTLAYYNNLEKKDFTTNS-D 762
Query: 245 SILEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
I+ + + LAKI + G +E E ++ +D+S ++S+ +++
Sbjct: 763 FIVFDEKLDSDLAKIIREILGK---DENTNIYKSEVDTITDIDLSEDTISKLNISSKL-- 817
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILS 357
++++I D ++ + NL ++NL G G L G L L L
Sbjct: 818 -----TNTNIINLDGIQYFS----NLHSINL-------RGHGKLEGLENLMPLRGLIKLD 861
Query: 358 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
L G +++ ++ Y++ + SLK++ ++N ++ G L+ L+NL L L+
Sbjct: 862 LQGREVNYISLYYINYLTSLKYLYLNNMNLTG-------------DLSFLENLTDLRVLD 908
Query: 418 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 477
L +T +S+ ++ LS + L L L +TD LS L LTNL I+ ++ N+ +
Sbjct: 909 LSRTGISNISI--LSKLRNLNELYLGGNKITD-----LSYLENLTNL-IKLDLVGNNDIT 960
Query: 478 SFKPPRSL 485
S R+L
Sbjct: 961 SIYALRNL 968
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 221/569 (38%), Gaps = 140/569 (24%)
Query: 36 RLPAHLADSLLRHLIRRRL------IFPSLLEVFK----HNA--------------EAIE 71
+P D + L+R+ + ++PS LE K HNA E +
Sbjct: 324 NIPIEFKDKVFEELVRKEINKPSGYVYPSDLENIKELDFHNAHIEKLNGIENMTALEKLN 383
Query: 72 LRGENSVDAEWMAYLGAFR-------------------YLRSLNVADCR----------- 101
L G + D + YL R Y+R LN+
Sbjct: 384 LSGTDIKDISLLKYLTNLREVNISNTSISDITALESSIYIRYLNLNKTEITTLEVIKKFE 443
Query: 102 -----RVTSSALWALTGMTCLKELDLSRC----------------------VKVTDAGMK 134
V+ + + + + L ELDLS C +K+ +
Sbjct: 444 HIEKLYVSGTKISTIPNLNSLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQGNLLN 503
Query: 135 HLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ +IS L KL +LS I +L SL NL LD+ G D QVL L +
Sbjct: 504 EINNISILGKLEYLSIANTNVVNIDVLRSLVNLRKLDITGCTKID-----TQVLNHLSDV 558
Query: 194 DLWGSQVSNRGAAVLK-------------MFPR----LSFLNLAWTGVTKLPNISSLE-- 234
++ G+++ G VL+ ++ R ++ L L+ G+ L + S+E
Sbjct: 559 EIIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLLSITKLELSGRGIVDLQGLESMENL 618
Query: 235 -CLNLSN---CTIDSILE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 289
L+LSN IDSI + N K L K + I E+ +E LD+SN+
Sbjct: 619 IYLDLSNNEISNIDSIKKLINLKKLVLHKNKIGSIKVI---ESLTKLEE-----LDLSNN 670
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAG 348
+ L + L LDLS + I V + + G NL+ L+L + S +
Sbjct: 671 LIGDITALGGLSQLTRLDLSRNGI----VSINSLGGLINLQYLSLYENKISEREESL--K 724
Query: 349 HLPNLEILSL--SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
L NL L L SG D ++Y + + F +N+D F +++ ++DL +
Sbjct: 725 KLYNLRELYLKNSGVSNFDVTLAYYNNLEKKDF--TTNSDFIVFDEKL--DSDLAKIIRE 780
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLS--TFKEL-IHLSLRNASLTDVSLHQLSSLSKLTN 463
+ L E N+ +++V T LS T +L I L N ++ ++L + S L +
Sbjct: 781 I--LGKDENTNIYKSEVDTITDIDLSEDTISKLNISSKLTNTNI--INLDGIQYFSNLHS 836
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 492
+++R GL + P R L LDL G
Sbjct: 837 INLRGHGKL-EGLENLMPLRGLIKLDLQG 864
>gi|343033702|gb|AEL79574.1| esag8 [Trypanosoma evansi]
Length = 584
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 131/299 (43%), Gaps = 44/299 (14%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+ L+++ C +T L A+ G+ L++L LS C VT G++ L S L KL +S
Sbjct: 256 LKVLDISSCHEITD--LTAIAGVRSLEKLSLSGCWNVT-KGLEELCKFSNLRKLDISGC- 311
Query: 152 LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-------VSN- 202
L +L +L NL VL + DL L++L LE L+L G V+N
Sbjct: 312 LVLGSAVVLKNLINLKVLSVSNCKNFKDL--NGLEILVNLEKLNLSGCHGVSSLGFVANL 369
Query: 203 --------RGAAVLKMFPRLSFLN----------LAWTGVTKLPNISSLECLNLSNCTID 244
G L F L LN ++T V + N+S + L+LS C
Sbjct: 370 SNLKELDISGCESLVCFDGLQDLNNLELLYLRDVKSFTNVGAIKNLSKMRELDLSGCERI 429
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKAL 303
+ L G E L ++SL G I + + L L VS +L L ++ L
Sbjct: 430 TSLSGLETLKRLEELSLEGCGEIMSFDPIWSLHH--LRVLYVSECGNLEDLSGLQRLTGL 487
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSG 360
E L L IG + + + VG NLRNL +T + A + L G L NLE L LSG
Sbjct: 488 EELYL----IGCEEITTIGVVG-NLRNLKYLSTCW-CANLKELGGLERLVNLEKLDLSG 540
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 196/492 (39%), Gaps = 97/492 (19%)
Query: 24 VQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLL-EVFKHNAEAIELR-GENSVDAE 81
V++WR S R + RR P LL E+ E R G + +D
Sbjct: 37 VERWR-------------CPSCRRRIGGRRKANPHLLREIADVTMELKRYRKGRSGIDVT 83
Query: 82 WMA-YLGA---------FRYL--------RSLNVADCRRVTSSALWALTGMTCLKELDLS 123
MA LG FR L + LN++ C L +L + L++LDLS
Sbjct: 84 QMARKLGGGGVTTSSEIFRRLEGSKNGRWKMLNLSGCGSELQD-LTSLRDLEALEDLDLS 142
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLV 180
C + + L++ L KL + T + I LL L +L V + G VTD+
Sbjct: 143 ECSNLELRELMVALTLRNLRKLRMKRTMVNDMWCSSIGLLKFLVHLEVDESRG--VTDIT 200
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLEC 235
L L LE L L +G + P+L L+L T +T + L+
Sbjct: 201 --GLCRLKTLEALSLDSCINITKGFDKICALPQLMSLSLYQTNITDKDLRCIHPDGKLKV 258
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
L++S+C + L L K+SL+G + + L C
Sbjct: 259 LDISSCHEITDLTAIAGVRSLEKLSLSGCWNVTK--------------------GLEELC 298
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSS-AGVGILAGHLPNL 353
+ L LD+S ++ +V + + NL+ L++SN + F G+ IL NL
Sbjct: 299 ---KFSNLRKLDISGCLVLGSAVVLKNLI--NLKVLSVSNCKNFKDLNGLEILV----NL 349
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
E L+LSG ++ +++ + +LK +DIS G E+ ++ LQ+LN+L
Sbjct: 350 EKLNLSGCH-GVSSLGFVANLSNLKELDIS-----------GCES--LVCFDGLQDLNNL 395
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
E L L + S + + ++ L L SL L +L +L LS+
Sbjct: 396 ELLYLRDVK-SFTNVGAIKNLSKMRELDLSGCERI-TSLSGLETLKRLEELSLEGC---- 449
Query: 474 SGLGSFKPPRSL 485
+ SF P SL
Sbjct: 450 GEIMSFDPIWSL 461
>gi|195487977|ref|XP_002092120.1| GE11843 [Drosophila yakuba]
gi|194178221|gb|EDW91832.1| GE11843 [Drosophila yakuba]
Length = 533
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 343 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 402
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 403 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 462
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ +L L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 463 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 522
Query: 215 SFLNLA 220
LNL
Sbjct: 523 QKLNLG 528
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 138/330 (41%), Gaps = 70/330 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SLN++ C V L + LK LDLS C ++TD +
Sbjct: 231 LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGR-------------- 276
Query: 150 TGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDL---WGSQVSNR 203
+ L+NL L+LGG + T L+L + L KL++L+L W +S++
Sbjct: 277 ---------IAQHLRNLETLELGGCCNITNTGLLLIAWG-LKKLKHLNLRSCW--HISDQ 324
Query: 204 GAAVLKMFPRLSF---LNLAWTGVTKLPNIS------------SLECLNLSNC--TIDSI 246
G L F R + L L + G+ +S SL+ +NLS C DS
Sbjct: 325 GIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSG 384
Query: 247 LEGNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+ L +++L I++ A+L S ++ LDVS FC +AL H
Sbjct: 385 LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVS------FCDKISDQALTH 438
Query: 306 ----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 354
L L+ I D + +A L NLN+ +R + G+ LA L NL+
Sbjct: 439 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 498
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G TQ+ I + +P L+ +++
Sbjct: 499 TIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 528
>gi|406831652|ref|ZP_11091246.1| hypothetical protein SpalD1_08439 [Schlesneria paludicola DSM
18645]
Length = 267
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
AE ++ +G + L++L + + VT A+ L GM L L L +++D G++HL +
Sbjct: 95 AELLSEIGTLKELKTLWLLGPQ-VTDVAVEKLVGMKNLTGLYLGYS-QLSDRGIEHLKGL 152
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
S LE ++L +T + +L L NL + L VTD ++ L+ L L+YL L G+
Sbjct: 153 SGLEWIFLIQTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLGLAGTD 212
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 245
VS+ G L L L++ T ++ + + +++CTID+
Sbjct: 213 VSDDGLKYLIEMKALKRLDIGNTLISDEGQAAIRK--GMTSCTIDA 256
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 33/174 (18%)
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
L A+ ++ + +L+ L L L G VTD+ + L + L L L SQ+S+RG LK
Sbjct: 93 LPAELLSEIGTLKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRGIEHLKGL 152
Query: 212 PRLSFLNLAWTGVTK--------LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 263
L ++ L T V LPN+ S+ LN +N T D+ ++ + L + LAG
Sbjct: 153 SGLEWIFLIQTQVGDKTCDILQGLPNLKSI-ALNDTNVT-DAGVKKLKALGDLQYLGLAG 210
Query: 264 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 317
T DVS+ L +L +MKAL+ LD+ +++I D+
Sbjct: 211 T--------------------DVSDDGLK---YLIEMKALKRLDIGNTLISDEG 241
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLK--FIDISNTDIKGFIQQVGAETDLVLSLT 405
G L L+ L L G Q+ D A+ + M +L ++ S +G +
Sbjct: 102 GTLKELKTLWLLGPQVTDVAVEKLVGMKNLTGLYLGYSQLSDRG--------------IE 147
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 465
L+ L+ LE + L QTQV D T L L ++L + ++TD + +L +L L L
Sbjct: 148 HLKGLSGLEWIFLIQTQVGDKTCDILQGLPNLKSIALNDTNVTDAGVKKLKALGDLQYLG 207
Query: 466 IRDAVLTNSGLGSFKPPRSLKLLDL 490
+ +++ GL ++LK LD+
Sbjct: 208 LAGTDVSDDGLKYLIEMKALKRLDI 232
>gi|402561579|ref|YP_006604303.1| internalin [Bacillus thuringiensis HD-771]
gi|401790231|gb|AFQ16270.1| internalin [Bacillus thuringiensis HD-771]
Length = 760
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +++
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVQ--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIRDAVLTN 473
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|228951810|ref|ZP_04113908.1| Internalin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|423423509|ref|ZP_17400540.1| hypothetical protein IE5_01198 [Bacillus cereus BAG3X2-2]
gi|423504975|ref|ZP_17481566.1| hypothetical protein IG1_02540 [Bacillus cereus HD73]
gi|449088218|ref|YP_007420659.1| Internalin [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|228807733|gb|EEM54254.1| Internalin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|401115199|gb|EJQ23052.1| hypothetical protein IE5_01198 [Bacillus cereus BAG3X2-2]
gi|402455497|gb|EJV87280.1| hypothetical protein IG1_02540 [Bacillus cereus HD73]
gi|449021975|gb|AGE77138.1| Internalin [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 755
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 273
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 330
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 293
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 317
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 459 SKLTNLSIRDAVLT 472
L +L + D VLT
Sbjct: 363 KALYSLPLTDLVLT 376
>gi|423509242|ref|ZP_17485773.1| hypothetical protein IG3_00739 [Bacillus cereus HuA2-1]
gi|402456533|gb|EJV88306.1| hypothetical protein IG3_00739 [Bacillus cereus HuA2-1]
Length = 759
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 39/230 (16%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
F L+ LN R S + L M L+ LDLS K+T+ L+ + ++ L+LS
Sbjct: 260 FANLKQLNHLALRGNEFSDVTPLVKMDNLESLDLSNN-KITNVA--PLIEMKNVKSLYLS 316
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
G + + L+ ++ L L+L +T++ L L + YL L G+Q+ + +
Sbjct: 317 --GNQIEDVTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTLAGNQIED-----I 367
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN---ENKAPLAKISLAGTT 265
K L +L T K+ ++S ++ +N ++ + G E+ PLAK++
Sbjct: 368 KPLYSLPLKDLVLTR-NKVKDLSGIDQMN----QLNKLFIGKNQIEDVTPLAKMTQ---- 418
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
L+ LD+ N+ L L+ + L+ LDL ++ I D
Sbjct: 419 ---------------LTELDLPNNELKDITPLSSLVNLQKLDLEANYISD 453
>gi|357448529|ref|XP_003594540.1| hypothetical protein MTR_2g030380 [Medicago truncatula]
gi|355483588|gb|AES64791.1| hypothetical protein MTR_2g030380 [Medicago truncatula]
Length = 1048
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 193/429 (44%), Gaps = 52/429 (12%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
A +G F L++L++A + +++ M +K LDLSR ++ A L +++L
Sbjct: 120 AGIGKFGSLQNLSLA-GNNFSGPIPNSISEMASIKSLDLSRNA-LSGALPSSLPKLNSLV 177
Query: 144 KLWLSE---TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L LS TG G L+SSL L DL G + +L+ Y+DL + +
Sbjct: 178 SLNLSYNRLTGKIPKGFELISSLDKL---DLHGNMFDGPLDVEFMLLSSASYVDLSDNML 234
Query: 201 --SNRGAAVLKMFPRLSFLNLAWTGVTKL-------PNISSLECLNLSNCTIDSILEGNE 251
S+ G + + + +LNL+ +T + P L+ L+LS ++ L G +
Sbjct: 235 LSSSSGKFLPGISESIKYLNLSHNQLTGILVGGAEQPVFQDLKVLDLSYNQLNGELPGFD 294
Query: 252 NKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 310
L + L+ F L ++ +L+ LD+S ++LS + L L+LSS
Sbjct: 295 FVYDLQILKLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPLSMITSTTLHFLNLSS 354
Query: 311 S-MIGDDSVEMVACVGANLRN----------LNLSNTRFSSAGVGILAGHLPN------- 352
+ G+ + +C +L N L N + G LAG++P
Sbjct: 355 NGFTGELPLLTGSCAVLDLSNNKFEGNLTRMLKWGNIEYLDLGRNRLAGNVPEVTPQFLR 414
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------IQQVGAETDLV- 401
L L+LS ++ D ++ P L+ +DIS+ +KG +Q++ E +L+
Sbjct: 415 LNYLNLSNNRLSDDLPKVLTQYPKLRVLDISSNQLKGVLLTELFTMPTLQELHLENNLIN 474
Query: 402 --LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 459
++L++ + +HL+ L+L Q+S + FP F L L + N + + + ++++
Sbjct: 475 GGINLSSSLDQSHLQVLDLSHNQLS--SFFP-DEFGSLTSLRVLNIAGNNFAGSLPTTIA 531
Query: 460 KLTNLSIRD 468
+++L+ D
Sbjct: 532 DMSSLNSLD 540
>gi|114325974|gb|ABI64127.1| putative F-box and leucine-rich repeat protein [Jatropha curcas]
Length = 407
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 142/299 (47%), Gaps = 33/299 (11%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHL 136
D++ F+ LR L++ C+ +T S + ++ G++ L+ LD+S C K+TD G+ +
Sbjct: 87 TDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAV 146
Query: 137 L-SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLE 191
L+ L L+ L DG+ AL ++ L L L G +TD L L +++
Sbjct: 147 AEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQ 206
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE 251
+LD+ ++ SN G + NL+ + L + L+C + + +I S+ +
Sbjct: 207 FLDI--NKCSNIG--------DVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCN 256
Query: 252 NKAPLAKISLAGTTFINEREAFLY---IETSLLSF-----LDVSNSSLSRFCFLTQMKAL 303
N L + + G I++ L + SL + L+VS+SSLS C LT+ + L
Sbjct: 257 N---LETLIIGGCRDISDNSIKLLASACKNSLKTLRMDWCLNVSDSSLS--CILTECRNL 311
Query: 304 EHLDLSSS-MIGDDSVEMVACVGA--NLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 358
E LD+ I D + + +A + L+ L +SN + + G+G+L LE L +
Sbjct: 312 EALDIGCCEEITDAAFQGLATIKTELGLKILKVSNCPKITVTGIGMLLEKCNGLEYLDV 370
>gi|423601235|ref|ZP_17577235.1| hypothetical protein III_04037 [Bacillus cereus VD078]
gi|401230662|gb|EJR37168.1| hypothetical protein III_04037 [Bacillus cereus VD078]
Length = 760
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|115485937|ref|NP_001068112.1| Os11g0568200 [Oryza sativa Japonica Group]
gi|77551477|gb|ABA94274.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
gi|113645334|dbj|BAF28475.1| Os11g0568200 [Oryza sativa Japonica Group]
gi|125577550|gb|EAZ18772.1| hypothetical protein OsJ_34300 [Oryza sativa Japonica Group]
Length = 645
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 173/416 (41%), Gaps = 71/416 (17%)
Query: 136 LLSISTLEKLWLSETGLTADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
L+S+ LE L LS L +SSL+NL ++ G+P+T +V L +TKL+Y
Sbjct: 108 LISLEHLEHLDLSNNNLVGPAGRFPRFVSSLRNLIYINFSGMPLTGMVPPQLGNITKLQY 167
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG--- 249
LDL + G + T + L N+ +L L LSN + + +
Sbjct: 168 LDL------SHGIGMYS------------TDIQWLTNLPALRYLGLSNVNLSRVSDWPRV 209
Query: 250 -NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEH 305
N N L + L+G + + ++F + + L LD+S ++ ++ C+ + +L +
Sbjct: 210 VNMNSY-LIVLDLSGCSLTSASQSFSQLNLTRLEKLDLSYNNFNQPLASCWFWNLTSLTY 268
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI----LAGHLPNLEILSLSG- 360
LDL +++ + + + A L RFSS G I L +L NLEIL L G
Sbjct: 269 LDLIMNILPGQFPDSLGDMKA------LQVFRFSSNGHSIIMPNLLQNLCNLEILDLGGL 322
Query: 361 --TQIDDYAISYMSMMPS-LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
I + S M + ++ + + + +I G + T + L+ L+
Sbjct: 323 SSCNITELLDSLMHCLTKRIRKLYLWDNNITGTLP------------TGVGKFTSLDTLD 370
Query: 418 LEQTQVSDATLFPLSTFKEL--IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
L Q++ + + +S L I LSL N + +++ L+ L L +L++
Sbjct: 371 LSHNQLTGSVPYEISMLTSLAKIDLSLNNLT-GEITEEHLAGLKSLKSLNLYYNPYLKIV 429
Query: 476 LGS-FKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 530
LG + PP L E A C++ P W + V I S G
Sbjct: 430 LGDEWLPPFRL------------EVARFGSCQLGPMFPSWLQWMVNIKELDIWSTG 473
>gi|388498858|gb|AFK37495.1| unknown [Lotus japonicus]
Length = 357
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 24/134 (17%)
Query: 90 RYLRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+++ LN++ C+++T + + L+ L+L+RC+KVTD G+K LL
Sbjct: 167 KHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCL------- 219
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAV 207
SLQ+L++ L TD R + +LT+L++LDL G+Q +S++G
Sbjct: 220 -------------SLQSLNLYALSSF--TDAAYREISLLTRLKFLDLCGAQNLSDQGLHC 264
Query: 208 LKMFPRLSFLNLAW 221
+ L LNL W
Sbjct: 265 ISKCKDLVSLNLTW 278
>gi|365162122|ref|ZP_09358255.1| hypothetical protein HMPREF1014_03718 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363619035|gb|EHL70365.1| hypothetical protein HMPREF1014_03718 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 755
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 273
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 330
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 293
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 317
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 459 SKLTNLSIRDAVLT 472
L +L + D VLT
Sbjct: 363 KALYSLPLTDLVLT 376
>gi|229177836|ref|ZP_04305209.1| Internalin [Bacillus cereus 172560W]
gi|228605627|gb|EEK63075.1| Internalin [Bacillus cereus 172560W]
Length = 766
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLT 472
L +L + D VLT
Sbjct: 374 KALYSLPLTDLVLT 387
>gi|219821324|gb|ACL37794.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 148/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLT 237
Query: 398 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELELGYNQISNISPIAGLTALTSLELHENQLED--ISPISNLKNLTYLALYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L++A ++ L +S L L
Sbjct: 210 -TLASLTNLTSLDVANNQISNLAPLSGLTKL 239
>gi|91088789|ref|XP_968000.1| PREDICTED: similar to CG5195 CG5195-PA [Tribolium castaneum]
gi|270011625|gb|EFA08073.1| hypothetical protein TcasGA2_TC005669 [Tribolium castaneum]
Length = 506
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 13/279 (4%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
+K LDL+ + + K + + L++L L+ + + + ++ ++ +DL +
Sbjct: 91 IKNLDLTNSL-IETVRQKAFVGLIFLQRLILANNAIKSIYPGTFTGVKKITYVDLENNSI 149
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----NISS 232
+ L L LE L+L +++ + + L L+L++ + + N++S
Sbjct: 150 SILSDDGFLELINLEELNLRHNEIKSIATSAFNGLVHLQELDLSYNAIGDINGVFNNLTS 209
Query: 233 LECLNLSNCTIDSILEGNE--NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
L L+LS I S+L G E N L +I I A + S L LD+S ++
Sbjct: 210 LRLLDLSYNKI-SVLTGKEFDNLTSLLEIRFK-FNHITTIPASEFYSMSRLRRLDLSFNA 267
Query: 291 LS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
+S R + ALE LDL ++ + + + + + NL+ LN SN R S G+ +G
Sbjct: 268 ISGVRAGSFKGLHALEILDLGNNAVAEVPQKTLQSL-HNLQYLNFSNNRLSIFQTGLYSG 326
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
LP L +L+ S I+D I+ + + SL +D S +I
Sbjct: 327 -LPQLRVLNFSHNVIEDIEITGVFSLDSLDTLDFSFNNI 364
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 14/170 (8%)
Query: 87 GAFRYLRSLNVADCRRVTSSALWALTG-----MTCLKELDLSRCVKVTDAGMKHLLSIST 141
G F L SL + D ++ + + LTG +T L E+ + +T S+S
Sbjct: 202 GVFNNLTSLRLLD---LSYNKISVLTGKEFDNLTSLLEIRF-KFNHITTIPASEFYSMSR 257
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L +L LS ++ L L +LDLG V ++ ++LQ L L+YL+ +++S
Sbjct: 258 LRRLDLSFNAISGVRAGSFKGLHALEILDLGNNAVAEVPQKTLQSLHNLQYLNFSNNRLS 317
Query: 202 NRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSI 246
+ P+L LN + +T + ++ SL+ L+ S I ++
Sbjct: 318 IFQTGLYSGLPQLRVLNFSHNVIEDIEITGVFSLDSLDTLDFSFNNISNV 367
>gi|26325522|dbj|BAC26515.1| unnamed protein product [Mus musculus]
Length = 745
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 73/311 (23%)
Query: 68 EAIELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
+ I G + DA + + + + + + DC+ +T S+L +L+ + L L+L+ C+
Sbjct: 409 KKIRFEGNKRISDACFKSIDRNYPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCI 468
Query: 127 KVTDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLV 180
++ D G+KH L +L L+ L D I L NL L+L +TDL
Sbjct: 469 RIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLA 528
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
+ + + L +DL G+ +SN G +L KL +S +C+N+++
Sbjct: 529 IEYIASMLSLISVDLSGTLISNEGMTILSRH-------------RKLREVSVSDCVNITD 575
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
I + Y +TSLL
Sbjct: 576 FGIRA-----------------------------YCKTSLL------------------- 587
Query: 301 KALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 358
LEHLD+S S + DD ++ +A + +LN++ + + AG+ IL+ L IL +
Sbjct: 588 --LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLHILDI 645
Query: 359 SGT-QIDDYAI 368
SG Q+ D I
Sbjct: 646 SGCIQLTDQII 656
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 37/305 (12%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLT 153
LN C T + L A++ L+EL++S C TD M+H+ + L LS T +T
Sbjct: 265 LNFRGCDFRTKT-LKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNTTIT 323
Query: 154 ADGIALL----SSLQNLSVLDLGGLPVTDLVLRSLQV---LTKLEYLDLWGSQVSNRGAA 206
+ LL +LQNLS+ TD L+ L + KL YLDL G
Sbjct: 324 NRTMRLLPKYFHNLQNLSLAYCEKF--TDKGLQYLNLGNGCHKLIYLDLSGCT-----QV 376
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTT 265
+++ PR+S + L + P+IS LS+C + I EGN+ +IS A
Sbjct: 377 LVEKCPRISSVVLIGS-----PHISDSAFKALSSCDLKKIRFEGNK------RISDACFK 425
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--A 322
I+ Y + + +D + S L+ +K L L+L++ + IGD ++
Sbjct: 426 SIDRN----YPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDG 481
Query: 323 CVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFI 380
LR LNL+N + V L+ PNL L+L + + D AI Y++ M SL +
Sbjct: 482 PASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISV 541
Query: 381 DISNT 385
D+S T
Sbjct: 542 DLSGT 546
>gi|430746592|ref|YP_007205721.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
gi|430018312|gb|AGA30026.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
Length = 830
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
S I D +E +A + NL L++ T R G+ LA LP L L+LS + + D A
Sbjct: 629 SEEGIDDAGLEHLARL-VNLEGLSIHQTARIRGPGLAHLA-KLPKLTKLNLS-SGLSDKA 685
Query: 368 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 427
++ ++ + LK + + +TD++ + AL+ + L L+L++T+V+DA
Sbjct: 686 VARLAPLKELKRLSLDHTDLRDS------------GMAALKGMTTLTELSLDETKVTDAG 733
Query: 428 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI------RDAVLTNSGL 476
L L ++ LSL N S+ L L +S+L +LS + + LT++GL
Sbjct: 734 LSALKGMVQMERLSLGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGL 788
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
E +D + +L L L++ R+ L L + L +L+LS + +D +
Sbjct: 630 EEGIDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLSSGL--SDKAVA 687
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L + L++L L T L G+A L + L+ L L VTD L +L+ + ++E L
Sbjct: 688 RLAPLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMVQMERLS 747
Query: 195 LWGSQVSNRGAAVLKMFPR---LSFLNLAW--------TGVTKLPNISSLECLNLSNCTI 243
L V G A LK R LSF+ +A G+ L N+ +L+ LNL ++
Sbjct: 748 LGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGLVHLENLPALDFLNLGETSV 807
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 349 HLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 407
L NLE LS+ T +I +++++ +P L +++S+ G + ++ L
Sbjct: 643 RLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLSS----GLSDK---------AVARL 689
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
L L+RL+L+ T + D+ + L L LSL +TD L L + ++ LS+
Sbjct: 690 APLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMVQMERLSLG 749
Query: 468 DAVLTNSGLGSFK 480
+ + GL + K
Sbjct: 750 NVSVRGPGLANLK 762
>gi|168179599|ref|ZP_02614263.1| putative internalin [Clostridium botulinum NCTC 2916]
gi|182669866|gb|EDT81842.1| putative internalin [Clostridium botulinum NCTC 2916]
Length = 364
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 44/271 (16%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT---A 154
++ +V A+ G L+++ + + ++ G+++L I L L L E LT
Sbjct: 58 SNLEKVIRLAIRKPIGKLRLRDVVDIKKLDASNKGIQNLDGIENL--LRLQELDLTDNEI 115
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 214
D I+ LSSL+++S+L LG +TD+ SL+ +KL+ L L+ ++V + LK F ++
Sbjct: 116 DDISALSSLKDISILKLGKNKITDIA--SLKNCSKLKELYLFDNKVID--ITPLKNFEKI 171
Query: 215 SFLNLAWTGVTK---LPNISSLECLNL-SNCTID--SILEGNENKAPLAKISLAGTTF-- 266
L+L V LP + +L+ + L +N ID IL+ + L ++LAG F
Sbjct: 172 YILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILKMQQ----LTTVNLAGNNFTD 227
Query: 267 ---INEREAF--LYIETS------------LLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
IN+ + LYI + L LDVSN+ ++ ++ + +E L++S
Sbjct: 228 MKDINQLKNLIELYIGDNGIKDLTFLKSMPNLKVLDVSNNKITDINSISNLNGIEELNIS 287
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
S+ I D + N +NL+ + R+++
Sbjct: 288 SNYIRD------IKILENFKNLSKVDLRYNN 312
>gi|449134939|ref|ZP_21770403.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448886418|gb|EMB16825.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 341
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
DA K + + L + +T +T DG ++L+ L L + L PVTD L ++ L K
Sbjct: 131 DAKAKSISGLPALIAVTFQDTSVTDDGASVLAELNELQDISLMNSPVTDKTLIAISTLPK 190
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 244
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LEDLELAETDFGPEGMPAIANIEGLEKVNLWLTKID 249
Query: 245 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L+ E K L +++ I E + + L L + +S++ L Q+K L
Sbjct: 250 NESLKAFEGKTSLTALNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDA-LPQLKPL 308
Query: 304 EHLD 307
+ L+
Sbjct: 309 QELE 312
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
LPNL+ L + G + DD +S +P+L + +T + V AE
Sbjct: 116 LPNLKRLRIYGKEFDDAKAKSISGLPALIAVTFQDTSVTDDGASVLAE------------ 163
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 LNELQDISLMNSPVTDKTLIAISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
++ + AL + + + DD ++A + L++++L N+ + + I LP L L
Sbjct: 137 ISGLPALIAVTFQDTSVTDDGASVLAELN-ELQDISLMNSPVTDKTL-IAISTLPKLTKL 194
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 416
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LEDLELAETDF-------GPE-----GMPAIANIEGLEKV 241
Query: 417 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
NL T++ + +L L L++ N ++T+ ++ + SL L L + +
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTALNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDA 301
Query: 476 LGSFKPPRSLKLL 488
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|290995691|ref|XP_002680416.1| predicted protein [Naegleria gruberi]
gi|284094037|gb|EFC47672.1| predicted protein [Naegleria gruberi]
Length = 200
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT-----D 130
N +D+E + + L+ L++ C ++ + G + E+ C+KV D
Sbjct: 12 NQIDSEGARLISQIQQLKYLDIG-CNQIGTK------GAEFMSEMKQLTCLKVNNNQLKD 64
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
M+ + + L L ++ + ++G+ + +L+ L+ L++ + +L S+ L+ L
Sbjct: 65 EAMQSIGQLENLTHLNVNGNEIHSNGVEHIVNLKQLTRLEMNCNEIRNLNPDSISQLSNL 124
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN 250
YLD++ + N + +L+FLN+ + GVT S E L N + S GN
Sbjct: 125 TYLDIYNNNTGNSAVQAITSLKQLTFLNIGYNGVTWFGAFSLSEMKQLKNLKMKSNSIGN 184
Query: 251 E 251
+
Sbjct: 185 D 185
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 281 LSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
L++LD+ ++ + ++Q++ L++LD+ + IG E ++ + L L ++N +
Sbjct: 4 LTWLDIHSNQIDSEGARLISQIQQLKYLDIGCNQIGTKGAEFMSEM-KQLTCLKVNNNQL 62
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
+ + G L NL L+++G +I + ++ + L ++++ +I+
Sbjct: 63 KDEAMQSI-GQLENLTHLNVNGNEIHSNGVEHIVNLKQLTRLEMNCNEIRNL------NP 115
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
D S++ L NL +L+ N ++ + +++ K+L L++ +T LS +
Sbjct: 116 D---SISQLSNLTYLDIYN---NNTGNSAVQAITSLKQLTFLNIGYNGVTWFGAFSLSEM 169
Query: 459 SKLTNLSIRDAVLTNSGLGSFKP 481
+L NL ++ + N GL + K
Sbjct: 170 KQLKNLKMKSNSIGNDGLEALKS 192
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACV 324
I+ A L + L +LD+ + + F+++MK L L ++++ + D++++ + +
Sbjct: 14 IDSEGARLISQIQQLKYLDIGCNQIGTKGAEFMSEMKQLTCLKVNNNQLKDEAMQSIGQL 73
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +LN++ S GV + +L L L ++ +I + +S + +L ++DI N
Sbjct: 74 -ENLTHLNVNGNEIHSNGVEHIV-NLKQLTRLEMNCNEIRNLNPDSISQLSNLTYLDIYN 131
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
+ ++ A+ +L L LN+ V+ F LS K+L +L +++
Sbjct: 132 NNTGNS------------AVQAITSLKQLTFLNIGYNGVTWFGAFSLSEMKQLKNLKMKS 179
Query: 445 ASLTDVSLHQLSSL 458
S+ + L L SL
Sbjct: 180 NSIGNDGLEALKSL 193
>gi|229189511|ref|ZP_04316527.1| Internalin [Bacillus cereus ATCC 10876]
gi|228593956|gb|EEK51759.1| Internalin [Bacillus cereus ATCC 10876]
Length = 766
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLT 472
L +L + D VLT
Sbjct: 374 KALYSLPLTDLVLT 387
>gi|284040762|ref|YP_003390692.1| ribonuclease inhibitor [Spirosoma linguale DSM 74]
gi|283820055|gb|ADB41893.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Spirosoma
linguale DSM 74]
Length = 507
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
R A+ ++++ +W G T +++DA + + + L+KL L E
Sbjct: 366 RSFNDAQAAELPKLSNQIVWLKLGDT-----------EISDAALAQVAKLKNLQKLHLEE 414
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
T +T G+ L L L L+L G PVTD L L L L+ + LW ++VS G A LK
Sbjct: 415 TKVTDAGLKQLKGLAYLEYLNLYGTPVTDAGLAELAELKSLKTVYLWQTKVSEEGIARLK 474
Query: 210 M-FPRLSFLN 218
P+L +
Sbjct: 475 TALPKLEVIG 484
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
N + L L T++SDA L ++ K L L L +TD L QL L+ L L++
Sbjct: 381 NQIVWLKLGDTEISDAALAQVAKLKNLQKLHLEETKVTDAGLKQLKGLAYLEYLNLYGTP 440
Query: 471 LTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV 513
+T++GL +SLK + L W ++E+ I + P++EV
Sbjct: 441 VTDAGLAELAELKSLKTVYL---WQTKVSEEGIARLKTALPKLEV 482
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L +T ++ +A ++ L+NL L L VTD L+ L+ L LEYL+L+G+ V++ G A
Sbjct: 388 LGDTEISDAALAQVAKLKNLQKLHLEETKVTDAGLKQLKGLAYLEYLNLYGTPVTDAGLA 447
Query: 207 VLKMFPRLSFLNLAWT-----GVTKLPN-ISSLECL-NLSNCTIDSILEGNENKA 254
L L + L T G+ +L + LE + +S + ++ E KA
Sbjct: 448 ELAELKSLKTVYLWQTKVSEEGIARLKTALPKLEVIGGISEQAVAEFVKAGEPKA 502
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L L + I D ++ VA + NL+ L+L T+ + AG+ L G L LE L+L GT + D
Sbjct: 386 LKLGDTEISDAALAQVAKL-KNLQKLHLEETKVTDAGLKQLKG-LAYLEYLNLYGTPVTD 443
Query: 366 YAISYMSMMPSLKFIDISNTDI 387
++ ++ + SLK + + T +
Sbjct: 444 AGLAELAELKSLKTVYLWQTKV 465
>gi|229068980|ref|ZP_04202273.1| Internalin [Bacillus cereus F65185]
gi|229078614|ref|ZP_04211171.1| Internalin [Bacillus cereus Rock4-2]
gi|228704684|gb|EEL57113.1| Internalin [Bacillus cereus Rock4-2]
gi|228714092|gb|EEL65974.1| Internalin [Bacillus cereus F65185]
Length = 766
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLT 472
L +L + D VLT
Sbjct: 374 KALYSLPLTDLVLT 387
>gi|195635861|gb|ACG37399.1| Leucine Rich Repeat family protein [Zea mays]
Length = 349
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 26/135 (19%)
Query: 90 RYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKH-LLSISTLEKLWL 147
++L LN++ C+ +T + + LK L+++RCVK+TD G+ LL S+LE L
Sbjct: 159 KHLVHLNLSGCKNITDKGMQLIANNYQGLKTLNITRCVKLTDDGLNQVLLKCSSLESL-- 216
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAA 206
NL L TD V R + L+ L +LDL G+Q +++ G A
Sbjct: 217 -----------------NLFALS----SFTDSVYREIGSLSNLTFLDLCGAQNLTDDGLA 255
Query: 207 VLKMFPRLSFLNLAW 221
+ RL++LNL W
Sbjct: 256 CISRCGRLTYLNLTW 270
>gi|195346821|ref|XP_002039953.1| GM15616 [Drosophila sechellia]
gi|194135302|gb|EDW56818.1| GM15616 [Drosophila sechellia]
Length = 538
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 348 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 407
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 408 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 467
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ +L L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 468 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 527
Query: 215 SFLNLA 220
LNL
Sbjct: 528 QKLNLG 533
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 138/330 (41%), Gaps = 70/330 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SLN++ C V L + LK LDLS C ++TD +
Sbjct: 236 LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGR-------------- 281
Query: 150 TGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDL---WGSQVSNR 203
+ L+NL L+LGG + T L+L + L KL++L+L W +S++
Sbjct: 282 ---------IAQHLRNLETLELGGCCNITNTGLLLIAWG-LKKLKHLNLRSCW--HISDQ 329
Query: 204 GAAVLKMFPRLSF---LNLAWTGVTKLPNIS------------SLECLNLSNC--TIDSI 246
G L F R + L L + G+ +S SL+ +NLS C DS
Sbjct: 330 GIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSG 389
Query: 247 LEGNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+ L +++L I++ A+L S ++ LDVS FC +AL H
Sbjct: 390 LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVS------FCDKISDQALTH 443
Query: 306 ----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 354
L L+ I D + +A L NLN+ +R + G+ LA L NL+
Sbjct: 444 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 503
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G TQ+ I + +P L+ +++
Sbjct: 504 TIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 533
>gi|195585785|ref|XP_002082659.1| GD25110 [Drosophila simulans]
gi|194194668|gb|EDX08244.1| GD25110 [Drosophila simulans]
Length = 522
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 332 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 391
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 392 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 451
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ +L L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 452 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 511
Query: 215 SFLNLA 220
LNL
Sbjct: 512 QKLNLG 517
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 57/300 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
R L +L + C +T++ L + G+ LK L+L C ++D G+ HL S
Sbjct: 270 LRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRET---- 325
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAA 206
+E L + + L Q LS LG + Q LT L+ ++L + V++ G
Sbjct: 326 AEGNLQLEYLG-LQDCQRLSDEALGHIA---------QGLTSLKSINLSFCVSVTDSGLK 375
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
L P+L LNL C N+S+ + + EG
Sbjct: 376 HLARMPKLEQLNLR-------------SCDNISDIGMAYLTEGGSG-------------- 408
Query: 267 INEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
IN + +SF D +S+ +L+ + L L L+ I D + +A
Sbjct: 409 INSLD---------VSFCDKISDQALTHIA--QGLYRLRSLSLNQCQITDHGMLKIAKAL 457
Query: 326 ANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L NLN+ +R + G+ LA L NL+ + L G TQ+ I + +P L+ +++
Sbjct: 458 HELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 517
>gi|183979307|dbj|BAG30758.1| similar to CG7896 [Papilio xuthus]
Length = 1324
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 197/456 (43%), Gaps = 68/456 (14%)
Query: 87 GAFRYLRSLNVADC--RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
GAF LR L V D R++ L G+ L++LDLS +TD + S + L +
Sbjct: 236 GAFVSLRDLQVLDLGLNRLSKFNSDVLLGIENLQKLDLSENF-ITDFPTVAMKSFAALRQ 294
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L LS +T + L+SL +L VLDL + L + LT+L YLD+ + +
Sbjct: 295 LNLSSNMITNIDNSHLNSLVSLQVLDLSRNNLVKLSPGTFVGLTELRYLDVGVNSLRTVE 354
Query: 205 AAVLKMFPRL--------SFLNLAWTGVTKLPNISSLEC-LNLSNCTIDSILEGNENKAP 255
L + L + T +++LPN+ S+ N IL
Sbjct: 355 DDAFDGLTSLQTLLLRDNNILLIPATALSRLPNLVSIHLGFNRVTALSSDILRA------ 408
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
+++R L + +++ ++ ++ F + L HLDLS +++
Sbjct: 409 -----------VSDRVNSLVLSRNVIR--ELPPAAFEHF------RMLRHLDLSGNLLNS 449
Query: 316 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP--NLEILSLSGTQIDDYAISYMSM 373
S ++ + A+L L+L+ R +G L NL L +S QI + +S +
Sbjct: 450 ISADVFNGLEASLEYLSLNQNRI----LGFTEEELKFVNLWYLDISDNQISEIPVSAFQL 505
Query: 374 MPSLKFIDIS-NTDIKGFIQQVGAETDLV-------LSLTALQNLNHLERLNLEQTQVSD 425
+PSL +++S N+ I Q V +E + + L AL L+ +LE+ +S
Sbjct: 506 IPSLVHLNMSHNSHINVLPQNVFSENQALKIIDLSRVGLKALPVNLFLKNPSLEKIYISH 565
Query: 426 ATLFPLS--TFKELIHLSLRNASLTDVSLHQLSSLSK---LTNLSIRDAVLTNSGLGSFK 480
L +S +FK +LRN ++ D+S + + S+ + +SI+ L + L +FK
Sbjct: 566 NLLQEVSENSFK-----NLRNLTVLDLSYNHIVSIKTPAFVNVMSIQYLSLKGNQLNAFK 620
Query: 481 PP-----RSLKLLDLHGGWLLTEDAILQFCKMHPRI 511
SL+++D+ L K+HPR+
Sbjct: 621 GEFFNTGTSLEVIDISDNQL--SYLFPSSFKIHPRL 654
>gi|17647819|ref|NP_523812.1| partner of paired, isoform A [Drosophila melanogaster]
gi|194884489|ref|XP_001976275.1| GG20101 [Drosophila erecta]
gi|10441427|gb|AAG17034.1|AF187980_1 Partner of Paired [Drosophila melanogaster]
gi|7291460|gb|AAF46886.1| partner of paired, isoform A [Drosophila melanogaster]
gi|21430560|gb|AAM50958.1| RE01138p [Drosophila melanogaster]
gi|190659462|gb|EDV56675.1| GG20101 [Drosophila erecta]
gi|220947678|gb|ACL86382.1| CG9952-PA [synthetic construct]
gi|220957060|gb|ACL91073.1| ppa-PA [synthetic construct]
Length = 538
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 348 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 407
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 408 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 467
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ +L L L++G +TD L++L + LT L+ +DL+G +Q+S++G ++ P+L
Sbjct: 468 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKL 527
Query: 215 SFLNLA 220
LNL
Sbjct: 528 QKLNLG 533
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 138/330 (41%), Gaps = 70/330 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SLN++ C V L + LK LDLS C ++TD +
Sbjct: 236 LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGR-------------- 281
Query: 150 TGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDL---WGSQVSNR 203
+ L+NL L+LGG + T L+L + L KL++L+L W +S++
Sbjct: 282 ---------IAQHLRNLETLELGGCCNITNTGLLLIAWG-LKKLKHLNLRSCW--HISDQ 329
Query: 204 GAAVLKMFPRLSF---LNLAWTGVTKLPNIS------------SLECLNLSNC--TIDSI 246
G L F R + L L + G+ +S SL+ +NLS C DS
Sbjct: 330 GIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSG 389
Query: 247 LEGNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+ L +++L I++ A+L S ++ LDVS FC +AL H
Sbjct: 390 LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVS------FCDKISDQALTH 443
Query: 306 ----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 354
L L+ I D + +A L NLN+ +R + G+ LA L NL+
Sbjct: 444 IAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 503
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G TQ+ I + +P L+ +++
Sbjct: 504 TIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 533
>gi|423455119|ref|ZP_17431972.1| hypothetical protein IEE_03863 [Bacillus cereus BAG5X1-1]
gi|401134902|gb|EJQ42509.1| hypothetical protein IEE_03863 [Bacillus cereus BAG5X1-1]
Length = 752
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 24/200 (12%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 338
L LD+SN+ ++ LT+MK D++S + + +E VA + L LN++N +
Sbjct: 288 LESLDLSNNKITNVAPLTEMK-----DVTSLYLAGNQIEDVAPLAKMEQLDYLNVANNKI 342
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 393
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 343 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 399
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 400 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 455
Query: 454 QLSSLSKLTNLS-----IRD 468
+S+L KL LS IRD
Sbjct: 456 PVSNLKKLVFLSFVANEIRD 475
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 244 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 389
+ V L + ++ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 300 N--VAPLT-EMKDVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 354
Query: 390 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 430
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 355 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 412
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
LS +L L+L N L D++ LSSL L L +
Sbjct: 413 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|340057619|emb|CCC51965.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 872
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 155/401 (38%), Gaps = 88/401 (21%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+T L + T L+ L L CV++ + L S+ L L +S + ++G L++
Sbjct: 289 ITDEGLLPVRKCTSLQHLTLDNCVRLRS--INCLGSLHRLHTLTVSRNRMPSEGFKGLAN 346
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+ L VL L L L S+ + L LDL + +++ G A L +L L LA+
Sbjct: 347 LRGLEVLRFAVLNRI-LTLESIAGIQCLRELDLTDNWLTDEGCAFLAHCSQLEHLKLAY- 404
Query: 223 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
C ++S+ + A ++T LS
Sbjct: 405 ------------CRSVSD--------------------------VRWVRALTSLQTLDLS 426
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
+ V N CFL +++ L+ S D V++ VG N
Sbjct: 427 YTSVLN------CFLDSLRSCSSLEELSLAYCKDVVDISFVVGLNC-------------- 466
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
L+ L +SGT +D+ +S + P+L + + ++ VGA
Sbjct: 467 ----------LKSLDVSGTCVDESGLSSVGKCPALTNLSLRECRQVAGLKFVGA------ 510
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKL 461
L L LN E T + D + ++ ++L LS RN LTDV L L L
Sbjct: 511 -------LKQLINLNAEGTGMLDGNIDHITCCQKLEVLSFRNCPFLTDVRC--LKDLGGL 561
Query: 462 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
L + A +T+ G+ + SL+ +D+ G L+T L
Sbjct: 562 KALDLAGAYVTDEGVSTLSHCTSLESIDVSGCCLITHFGFL 602
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 165/405 (40%), Gaps = 76/405 (18%)
Query: 78 VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL 137
VD ++ +G L +L++ +CR+V + L + + L L+ + + D + H+
Sbjct: 477 VDESGLSSVGKCPALTNLSLRECRQV--AGLKFVGALKQLINLN-AEGTGMLDGNIDHIT 533
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
LE L D + L L L LDL G VTD + +L T LE +D+ G
Sbjct: 534 CCQKLEVLSFRNCPFLTD-VRCLKDLGGLKALDLAGAYVTDEGVSTLSHCTSLESIDVSG 592
Query: 198 S----------------QVSNRGAAVLKM--------FPRLSFLN---LAWTGVTKLPNI 230
V G V+ + R+S + L++ G +
Sbjct: 593 CCLITHFGFLIGLTKLRNVVANGMNVVNVDGLLKSPSMERVSLVESRRLSFVGHVAAARL 652
Query: 231 S--SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE------------------- 269
+ S+E N+SN I+++LEG + L ++SL I++
Sbjct: 653 TELSVENSNISNVGINAVLEGCYS---LQRLSLQQCPAISDLQGVSLLPKLQELLLRSTA 709
Query: 270 --REAFLYIETSL-LSFLDVSNSS-LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
RE+ I L L +S+ + ++ L +++L LDLS + + V+ +A
Sbjct: 710 VSRESVAQIAACENLRRLQISDCADVTDVNILCSLQSLVDLDLSKTNVTTGGVKGLAQCS 769
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
A L+ LNLS+ RF + + L G LP L L L T + D I+ + L+ + ++
Sbjct: 770 A-LKKLNLSDCRFVT-NINCL-GKLPVLRELYLCRTSVTDRGIAGLQHCRQLETLTLT-- 824
Query: 386 DIKGFIQQVGAETDLVLSLTALQN-LNHLERLNLEQTQVSDATLF 429
+ V + LQN L HLE ++ T V + F
Sbjct: 825 -----------KCSRVTKVDGLQNSLPHLETFDVYGTSVEGSRRF 858
>gi|300704108|ref|YP_003745710.1| leucine-rich-repeat type III effector protein (gala4) [Ralstonia
solanacearum CFBP2957]
gi|299071771|emb|CBJ43095.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum CFBP2957]
Length = 461
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++D +A + L +LNV+ + + + AL T + LD+S ++ D G
Sbjct: 202 NAIDDAGVAAFARNKKLTTLNVS-SNGIGPAGVRALAANTTITTLDISNN-EIGDEGALA 259
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L S +TL +L S+ G+ +G L++ L+ LDL + + +L T L L
Sbjct: 260 LASNTTLTRLDASDCGIGPEGTQALATSTTLTSLDLSYNAIEAEGVEALGRNTTLRTLHA 319
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCTIDSILEGN 250
G+++ +R A +L L+ LNL+ G ++L LNLSN I+ + E
Sbjct: 320 CGNELGHREAELLAANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPE-- 377
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDL 308
+ + L+ LD+SN+ + L + L L++
Sbjct: 378 ------------------------WADNGKLTTLDLSNNQIGDTAAQVLAASRTLTTLNV 413
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
S+ IGD +A L LN+S R AG+ LA +
Sbjct: 414 GSNRIGDTGACALAG-NTTLTTLNVSLNRIGKAGMLALAAN 453
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 56/287 (19%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTAD-------------------- 155
L+ELDLS C +T G+ HLL++ L++L +S L AD
Sbjct: 145 LRELDLSLCEGPITAVGIAHLLALP-LDRLDVSGCELNADSARLLAGHPTLTTLNLRRNA 203
Query: 156 ----GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
G+A + + L+ L++ + +R+L T + LD+ +++ + GA L
Sbjct: 204 IDDAGVAAFARNKKLTTLNVSSNGIGPAGVRALAANTTITTLDISNNEIGDEGALALASN 263
Query: 212 PRLSFLN-----LAWTGVTKLPNISSLECLNLS--------------NCTIDSILE-GNE 251
L+ L+ + G L ++L L+LS N T+ ++ GNE
Sbjct: 264 TTLTRLDASDCGIGPEGTQALATSTTLTSLDLSYNAIEAEGVEALGRNTTLRTLHACGNE 323
Query: 252 NKAPLAKISLAGTTF---------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 302
A++ A TT I A + + L L++SN+ + R
Sbjct: 324 LGHREAELLAANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEWADNGK 383
Query: 303 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
L LDLS++ IGD + +++A L LN+ + R G LAG+
Sbjct: 384 LTTLDLSNNQIGDTAAQVLAA-SRTLTTLNVGSNRIGDTGACALAGN 429
>gi|104647033|gb|ABF74140.1| disease resistance protein [Arabidopsis thaliana]
Length = 583
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPXXICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPXXICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|357511813|ref|XP_003626195.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501210|gb|AES82413.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 679
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 179/428 (41%), Gaps = 66/428 (15%)
Query: 83 MAYLG------AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ Y+G A L +++V+ C AL+ LKE+++ +C+ VTD G+ +
Sbjct: 146 LGYVGLEMLIKACPLLEAVDVSHCWGFGDREAAALSCGGKLKEINMDKCLGVTDIGLAKI 205
Query: 137 -LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ S LEKL L +D GI LLS +L+ LD+ L VT+ LRS+ L KLE
Sbjct: 206 AVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNESLRSIASLLKLEVF 265
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+ G + + L FL G L I C +S + S++ G+E
Sbjct: 266 IMVGCYLVDDAG--------LQFLE---KGCPLLKAIDVSRCNCVSPSGLLSVISGHE-- 312
Query: 254 APLAKISLAGTTFINEREAFLYIETSL---------LSFLDVSNSSLSRFCFL---TQMK 301
G IN + L LS + + +S F + K
Sbjct: 313 ---------GLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCK 363
Query: 302 ALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF-SSAGVGILAGHLPNLEILSLS 359
+L L LS IG ++ ++ VG NL L+L+ RF + A + +A PNL L L
Sbjct: 364 SLVELGLSKC-IGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLE 422
Query: 360 G----TQIDDYAI-SYMSMMPSLKFIDISNT-DIK-GFIQQVGAETDLVLSLTA------ 406
T+I Y I S M+ L D S DI ++ + L L L
Sbjct: 423 SCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIG 482
Query: 407 ----LQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLS 459
N L L+L + ++ D L L+T +L L+L + +TD L +S+L
Sbjct: 483 LAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNLG 542
Query: 460 KLTNLSIR 467
+L++ +R
Sbjct: 543 ELSDFELR 550
>gi|18568223|gb|AAL75966.1|AF467462_1 PpaB [Danio rerio]
Length = 392
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 37/327 (11%)
Query: 66 NAEAIELRGENSVDAEWM--AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDL 122
N E++ L G ++ + A++ LR LN++ C+++T S+L + + L+ L+L
Sbjct: 89 NIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNLEVLEL 148
Query: 123 SRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLV 180
C +T+ G+ + + L+ L L +D GI L+ + + G L + L
Sbjct: 149 GGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAA--EGCLSLEYLT 206
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECLNLS 239
L+ Q LT L + ++G LK+ LSF ++ G+ L +++SL LNL
Sbjct: 207 LQDCQKLTDLSLKHI------SKGLTKLKVL-NLSFCGGISDAGMIHLSHMTSLWSLNLR 259
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLT 298
+C D+I + + + L+G +SF D + + SL+ C
Sbjct: 260 SC--DNISDTGIMHLAMGTLRLSGLD---------------VSFCDKIGDQSLA--CIAQ 300
Query: 299 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILS 357
+ L+ L L S I DD + + LR LN+ R + G+ ++A HL L +
Sbjct: 301 GLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTGID 360
Query: 358 LSG-TQIDDYAISYMSMMPSLKFIDIS 383
L G T+I + ++ +P LK ++
Sbjct: 361 LYGCTKITKRGLERITQLPCLKVFNLG 387
>gi|125577549|gb|EAZ18771.1| hypothetical protein OsJ_34299 [Oryza sativa Japonica Group]
Length = 673
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 47/290 (16%)
Query: 147 LSETGLTA-DG--IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
LS LT DG ++SL+NL LDL GL T +V L L+KLE+LDL G+ + +
Sbjct: 128 LSNNNLTGPDGRFPVFVASLRNLQYLDLSGLGFTGMVPYQLGNLSKLEFLDLSGTGMQSA 187
Query: 204 GAAVLKMFPRLSFLNLA---------WTGVTKLPNISSLECLNLSNCTIDSILEG--NEN 252
+ L L +L L+ W V I SL L+LS C++ + + N
Sbjct: 188 DISWLTRLQWLKYLYLSSVNLSAISDWAHVVN--KIPSLTVLSLSGCSLTRVDHSLKHVN 245
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQMKALEHLDLSS 310
L K+ L+G F + + + L +LD+ ++ L RF +T M +L+ LD S
Sbjct: 246 LTRLEKLHLSGNDFSHPLSSCWFWILKTLIYLDLESTGLYGRFPNAITNMTSLQVLDFSR 305
Query: 311 S-------------------------MIGDDSVEMVA----CVGANLRNLNLSNTRFSSA 341
+ ++ + E++ C LR L LSN +
Sbjct: 306 NNNAGILEPILLRNLCNLESLNLQLGLLSGNMTELLESLSHCSPNKLRKLYLSNNNITGT 365
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
G +L + S Q+ + + + SL +D+S + G I
Sbjct: 366 LPAQSMGQFTSLANIGFSFNQLTGHVPPEIGKLASLTHLDLSENKLTGTI 415
>gi|44888783|gb|AAS48164.1| LRR protein WM1.10 [Aegilops tauschii]
Length = 1060
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 154/371 (41%), Gaps = 58/371 (15%)
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG----SQVSNRGAAVLKMFPRL 214
LL S+ NL L+L G+P T V L L+K++YLDL S + + L P L
Sbjct: 144 LLGSMGNLRYLNLSGIPFTGRVPSHLGNLSKMQYLDLGQAGDYSDMYSMDITWLTKLPFL 203
Query: 215 SFLNLAW---TGVTKLPN----ISSLECLNLSNCTIDSILEG--NENKAPLAKISLAGTT 265
FL ++ +G+ P+ I L ++LS C +DS + + N L K+ L+
Sbjct: 204 KFLGMSGVNLSGIADWPHTLNMIPPLRVIDLSYCLLDSANQSLLHLNLTKLEKLDLSWNF 263
Query: 266 FINEREA----------FLYIETSL--------------LSFLDVS---NSSLSRFCFLT 298
F + + +L++E +L L LD+S N + +
Sbjct: 264 FKHSLGSGWFWKVTSLKYLHLEWNLLFGKFPDTLGNMTYLRVLDISYNGNPDMMMTGNIK 323
Query: 299 QMKALEHLDLSSSMIGDDSVEMVA-----CVGANLRNLNLSNTRFSSAGVGILAGHLPNL 353
++ +LE LDLS + I D + C NL+ L+LS F+ I++ L
Sbjct: 324 KLCSLEILDLSGNRINGDIESLFVESLPQCTRKNLQKLDLSYNNFTGTLPNIVS-DFSKL 382
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI-QQVGAET----------DLVL 402
ILSLS + + + + L +D+ + G I ++GA T DL
Sbjct: 383 SILSLSNNNLVGPIPAQLGNLTCLTSLDLFWNHLNGSIPPELGALTTLTSLDLSMNDLTG 442
Query: 403 SLTA-LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
S+ A L NL +L L L ++ L L HL L + L ++ SL+ L
Sbjct: 443 SIPAELGNLRYLSELCLSDNNITAPIPPELMNSTSLTHLDLSSNHLNGSVPTEIGSLNNL 502
Query: 462 TNLSIRDAVLT 472
L + + T
Sbjct: 503 IYLYLSNNRFT 513
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 38/310 (12%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L +TCL LDL + + L +++TL L LS LT A L +L+ LS L
Sbjct: 400 LGNLTCLTSLDL-FWNHLNGSIPPELGALTTLTSLDLSMNDLTGSIPAELGNLRYLSELC 458
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA---WTGVT-- 225
L +T + L T L +LDL + ++ + L +L L+ +TGV
Sbjct: 459 LSDNNITAPIPPELMNSTSLTHLDLSSNHLNGSVPTEIGSLNNLIYLYLSNNRFTGVITE 518
Query: 226 -KLPNISSLECLNLS------------------------NCTIDSILEGNENKAPLAKIS 260
N++SL+ ++LS +C + + + +
Sbjct: 519 ENFANLTSLKDIDLSFNNLKIVLNSDWRAPFTLEFASFASCQMGPLFPPGLQRLKTNALD 578
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVE 319
++ TT E + + S ++LD+SN+ +S A E L L S+ +
Sbjct: 579 ISNTTLKGEIPDWFWSTFSNATYLDISNNQISGSLPAHMHSMAFEKLHLGSNRL----TG 634
Query: 320 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 379
+ + N+ L++SN FS L LEILS+ QI Y + + L +
Sbjct: 635 PIPTLPTNITLLDISNNTFSETIPSNLGAS--RLEILSMHSNQIGGYIPESICKLEQLLY 692
Query: 380 IDISNTDIKG 389
+D+SN ++G
Sbjct: 693 LDLSNNILEG 702
>gi|424834352|ref|ZP_18259063.1| leucine-rich repeat-containing protein [Clostridium sporogenes PA
3679]
gi|365978698|gb|EHN14767.1| leucine-rich repeat-containing protein [Clostridium sporogenes PA
3679]
Length = 1359
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 182/416 (43%), Gaps = 73/416 (17%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+ + +KELD G++++ + LEKL LS T + I+LL L NL +++
Sbjct: 352 SDLENIKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKYLTNLREVNI 406
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
++D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++
Sbjct: 407 SNTSISDIT--ALENSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLN 462
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL-----LSFLDV 286
SL LNLSNC + S + N L ++L+ + LY ++ L +L +
Sbjct: 463 SLMELNLSNCNLTSNNFLSSNFNNLVYLNLSNLKI---QGNLLYEINNISNLEKLEYLSI 519
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV----EMVACVGANL---------RNLNL 333
+N+++ L + L LD++ D V V VG + R +
Sbjct: 520 ANTNVVNIDVLRSLGNLIKLDITGCTKIDTQVLNHLSDVEIVGNEIVTFGDKVLEREIRE 579
Query: 334 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---- 389
+S I L ++ L LSG I D + + M +L ++D+SN +I
Sbjct: 580 LINNYSEP---IYKRQLSSITKLELSGRGIVD--LQGLESMENLTYLDLSNNEISNIDSI 634
Query: 390 --------------------------FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 423
+++++ +L+ +TAL L+ L RL+L + +
Sbjct: 635 KKLVKLKKLVLHKNKIGSIKSIESLKYLEELDLSNNLIGDITALGGLSQLTRLDLSRNGI 694
Query: 424 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
++ L L +LSL +++ + SL KL NL R+ L NSG+ +F
Sbjct: 695 --VSINSLGGLINLQYLSLYENKISE----REESLKKLYNL--RELYLKNSGVSNF 742
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 58/355 (16%)
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
+K + S+ LE+L LS L D I L L L+ LDL + + + SL L L
Sbjct: 651 GSIKSIESLKYLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSINSLGGLINL 706
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSI 246
+YL L+ +++S R ++ K++ L L L +GV+ L ++LE + + + D I
Sbjct: 707 QYLSLYENKISEREESLKKLY-NLRELYLKNSGVSNFDVTLAYYNNLEKKDFTTNS-DFI 764
Query: 247 LEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
+ + + LAKI + G +E E ++ LD+S ++S+ +++
Sbjct: 765 VFDEKRDSDLAKIIREILGK---DENTNIYKSEVDTITDLDLSEGTISKLNISSKL---- 817
Query: 305 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILSLS 359
++++I D ++ + NL ++NL G G L G + L L L
Sbjct: 818 ---TNTNVINLDGIQYFS----NLHSINL-------RGHGKLEGLENLIPIRGLIKLDLQ 863
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
G +I+ ++ Y+ + SL+++ ++N + G L+ L+NL +L L+L
Sbjct: 864 GREINYTSLYYIKYLTSLEYLYLNNMSLTG-------------DLSFLENLTNLRVLDLS 910
Query: 420 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 474
+T +S+ ++ L ++L L L + ++T+ LSSL LTNL D V N+
Sbjct: 911 RTGISNISI--LDKLRKLNELYLGDNNITN-----LSSLENLTNLVKLDLVENNN 958
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 68/296 (22%)
Query: 190 LEYLDLWGSQVSN---------RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
L Y+D+ G + N +G LK +L + ++ L + SLE LNL N
Sbjct: 154 LTYMDVAGIKELNVHNKNIKSLKGIEYLKNITKLDISDNNIKDISYLKGLDSLELLNLYN 213
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
+I+ I N N L ++L+ N+ + Y++ L LD+ ++ + L
Sbjct: 214 NSIEDISPIN-NMEKLKDVNLSK----NKVKDISYLKDLNLHHLDLRDNKIENIEVLKNK 268
Query: 301 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNL--------SNTRFSSAGVGILAG---- 348
+L+HL L+++ I D S +NL+NL + SN ++ L
Sbjct: 269 TSLQHLYLANNGIKDFSPI------SNLKNLQILYLSHNYSSNYDYAKDYYNNLKDKDFK 322
Query: 349 -------------HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 395
L EI LSG Y S + ++K +D N I+
Sbjct: 323 LNVPIEFKDKVFEELVRKEINKLSG-------YVYPSDLENIKELDFHNAHIE------- 368
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L ++N+ LE+LNL T + D +L L L +++ N S++D++
Sbjct: 369 -------KLNGIENMTALEKLNLSGTDIKDISL--LKYLTNLREVNISNTSISDIT 415
>gi|148671256|gb|EDL03203.1| F-box and leucine-rich repeat protein 13 [Mus musculus]
Length = 648
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 73/311 (23%)
Query: 68 EAIELRGENSV-DAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV 126
+ I G + DA + + + + + + DC+ +T S+L +L+ + L L+L+ C+
Sbjct: 312 KKIRFEGNKRISDACFKSIDRNYPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCI 371
Query: 127 KVTDAGMKHLLSIST---LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTDLV 180
++ D G+KH L +L L+ L D I L NL L+L +TDL
Sbjct: 372 RIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLA 431
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 240
+ + + L +DL G+ +SN G +L KL +S +C+N+++
Sbjct: 432 IEYIASMLSLISVDLSGTLISNEGMTILSRH-------------RKLREVSVSDCVNITD 478
Query: 241 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 300
I + Y +TSLL
Sbjct: 479 FGIRA-----------------------------YCKTSLL------------------- 490
Query: 301 KALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 358
LEHLD+S S + DD ++ +A + +LN++ + + AG+ IL+ L IL +
Sbjct: 491 --LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLHILDI 548
Query: 359 SGT-QIDDYAI 368
SG Q+ D I
Sbjct: 549 SGCIQLTDQII 559
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 37/305 (12%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLT 153
LN C T + L A++ L+EL++S C TD M+H+ + L LS T +T
Sbjct: 168 LNFRGCDFRTKT-LKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNTTIT 226
Query: 154 ADGIALL----SSLQNLSVLDLGGLPVTDLVLRSLQV---LTKLEYLDLWGSQVSNRGAA 206
+ LL +LQNLS+ TD L+ L + KL YLDL G
Sbjct: 227 NRTMRLLPRYFHNLQNLSLAYCRKF--TDKGLQYLNLGNGCHKLIYLDLSGCT-----QV 279
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTT 265
+++ PR+S + L + P+IS LS+C + I EGN+ +IS A
Sbjct: 280 LVEKCPRISSVVLIGS-----PHISDSAFKALSSCDLKKIRFEGNK------RISDACFK 328
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--A 322
I+ Y + + +D + S L+ +K L L+L++ + IGD ++
Sbjct: 329 SIDRN----YPGINHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDG 384
Query: 323 CVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFI 380
LR LNL+N + V L+ PNL L+L + + D AI Y++ M SL +
Sbjct: 385 PASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISV 444
Query: 381 DISNT 385
D+S T
Sbjct: 445 DLSGT 449
>gi|384248839|gb|EIE22322.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 263
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 100/240 (41%), Gaps = 49/240 (20%)
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
G TA + L SL L+ L L + V D + LT+L LDL + VS+ G L
Sbjct: 53 GGTALEVGPLLSLTRLASLRLVDMKVGDRDCAGIAALTQLTELDLRATSVSDTGVQGLSR 112
Query: 211 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 270
RL L++ WT T P +SSL L++ NC + G E +A L T F N R
Sbjct: 113 LLRLHRLDVTWTQATAPPALSSLTNLHMENCWV-----GGE----VALRVLHSTRFPNLR 163
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
E + S+ F D L FC + S+ + ++V C+
Sbjct: 164 E----LHMSMTQFDDAGIELLRAFC------------IDSAPDSSANNDVVKCL------ 201
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM-SMMPSLKFIDISNTDIKG 389
L NL +LSL T+IDD A+ + S+ SL +DIS +I G
Sbjct: 202 -----------------TDLTNLRMLSLKSTEIDDAALPLLQSLKGSLTSLDISGNNITG 244
>gi|356563009|ref|XP_003549759.1| PREDICTED: EIN3-binding F-box protein 1-like [Glycine max]
Length = 639
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 179/388 (46%), Gaps = 42/388 (10%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSIST-LEKLWLSE 149
L L++ C +++ L A+ G L L + C + + G++ + + T L+ + L +
Sbjct: 214 LEKLDLCHCSSISNKGLIAIAEGCPNLTTLTIESCPNIGNEGLQAIARLCTKLQSISLKD 273
Query: 150 TGLTAD-GIA-LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
L D G++ LL+S NLS + L L +TD SL V+ +G ++N +
Sbjct: 274 CPLVGDHGVSSLLASASNLSRVKLQTLKITDF---SLAVICH------YGKAITNLVLSG 324
Query: 208 LKMFPRLSFLNL-AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF 266
LK F + A G+ KL +++ C +++ +I++I +G N L ++ L F
Sbjct: 325 LKNVTERGFWVMGAAQGLQKLVSLTVTSCRGITDTSIEAIGKGCIN---LKQLCLHRCCF 381
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRF------CFLTQMKA-LEHLDLSSSMIGDDSVE 319
+++ + + +S + +RF L +K L+ L L M G ++
Sbjct: 382 VSD-SGLVAFAKAAVSLESLQLEECNRFTQSGIIVALANIKTKLKSLSLVKCM-GVKDID 439
Query: 320 MVACV---GANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 375
M C+ +LR+L + F SA + ++ P L+ L+L+G Y I+ ++P
Sbjct: 440 MEVCMLSPCESLRSLVIQKCPGFGSASLAMIGKLCPRLQHLNLTGL----YGITDAGLLP 495
Query: 376 SLKFID--ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLS 432
L+ + + N ++ G TD V+S A + LE LNL+ +++DA+L ++
Sbjct: 496 LLENCEAGLVNVNLTGCWNL----TDKVVSALARLHGGTLEVLNLDGCWKITDASLVAIA 551
Query: 433 -TFKELIHLSLRNASLTDVSLHQLSSLS 459
F L L + +++D + LS S
Sbjct: 552 NNFLVLNDLDVSKCAISDAGIALLSRAS 579
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 142/321 (44%), Gaps = 57/321 (17%)
Query: 60 LEVFKHNAEAIE---LRGENSVDAEWMAYLGAFRYLR---SLNVADCRRVTSSALWAL-T 112
L V H +AI L G +V +GA + L+ SL V CR +T +++ A+
Sbjct: 307 LAVICHYGKAITNLVLSGLKNVTERGFWVMGAAQGLQKLVSLTVTSCRGITDTSIEAIGK 366
Query: 113 GMTCLKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSETG-LTADGIALL-----SSLQN 165
G LK+L L RC V+D+G+ + +LE L L E T GI + + L++
Sbjct: 367 GCINLKQLCLHRCCFVSDSGLVAFAKAAVSLESLQLEECNRFTQSGIIVALANIKTKLKS 426
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL----KMFPRLSFLNLAW 221
LS++ G+ D+ + L L L + + G+A L K+ PRL LNL
Sbjct: 427 LSLVKCMGVKDIDMEVCMLSPCESLRSLVI--QKCPGFGSASLAMIGKLCPRLQHLNL-- 482
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 281
TG+ + + L L NC +A L ++L G + ++
Sbjct: 483 TGLYGITDAGLLPLLE--NC-----------EAGLVNVNLTGCWNLTDKVV--------- 520
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSS 340
S+L+R LE L+L I D S+ +A L +L++S S
Sbjct: 521 -------SALARL----HGGTLEVLNLDGCWKITDASLVAIANNFLVLNDLDVSKCAISD 569
Query: 341 AGVGILA-GHLPNLEILSLSG 360
AG+ +L+ LP+L++LSLSG
Sbjct: 570 AGIALLSRASLPSLQVLSLSG 590
>gi|392397014|ref|YP_006433615.1| hypothetical protein Fleli_1391 [Flexibacter litoralis DSM 6794]
gi|390528092|gb|AFM03822.1| hypothetical protein Fleli_1391 [Flexibacter litoralis DSM 6794]
Length = 831
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 200/495 (40%), Gaps = 103/495 (20%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + EW+A F ++ V D +++S L ++ GM L D+S V D
Sbjct: 205 NDLPVEWLAI---FSNHVTIPVGDS--ISNSQLHSIVGMEVL---DISNNPTVID----- 251
Query: 136 LLSISTLEKLWLSETGLT-ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
+ +S L KL + T + L S+ NL VLD PV DL+ +L T L L+
Sbjct: 252 IQPVSRLMKLKTFKCANTQVSNLFPLRSITNLEVLDASNTPVQDLL--ALTYATNLRELN 309
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA 254
+ ++VS L+ L L+++ TGV+ L + +E L I N A
Sbjct: 310 VSNTKVSE--IKTLEYLTHLERLDMSVTGVSSLEALGKIEGSVLKELRITKTKVAN--LA 365
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
PL +S L FL+ S + ++ L++ K LE LD+S++ +
Sbjct: 366 PLKNVST-------------------LQFLETSFTPITSISALSESKELERLDISNTNVS 406
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSS---------------AGVGILAGHLPNL------ 353
S+E ++ + A LR L +NT+ SS G+ G L
Sbjct: 407 --SLEPLSKL-AKLRLLYANNTKISSLKPLTSIAALERVYCDNTGVKLGQAQELTKSKSN 463
Query: 354 --------------EILSLSGTQIDDYAISYMSMMPS---------LKFIDISNTDIKGF 390
+ LSL ++ A S P+ + ID IK
Sbjct: 464 ILVVYESEALQNWWKTLSLDWKEVFKTASKLSSPNPTKEELATLSRITKIDAKGQSIKTV 523
Query: 391 --------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
++++ V +TAL++L LE L T++SD + L + +L L +
Sbjct: 524 EPLRIFEGLKEINISRTKVTDITALRDLIALEILEANNTKISDVS--SLQSLDKLKKLDI 581
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF--KPPRSL---KLLDLHGGWLLT 497
N +++D+S L +L+ L + + L + + +F K P ++ K + L+ W
Sbjct: 582 ENTAVSDIS--PLQNLTNLEFIYADGSALKDELVAAFLNKNPSTVVIYKTVTLNNWWTGL 639
Query: 498 EDAILQFCKMHPRIE 512
++ K H +IE
Sbjct: 640 SESWKTALKKHVKIE 654
>gi|242047708|ref|XP_002461600.1| hypothetical protein SORBIDRAFT_02g005220 [Sorghum bicolor]
gi|241924977|gb|EER98121.1| hypothetical protein SORBIDRAFT_02g005220 [Sorghum bicolor]
Length = 1100
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 153/352 (43%), Gaps = 41/352 (11%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
A +G +YL +L V + A + + LK LD+S ++T+ K + + L+
Sbjct: 632 ADIGRLKYLDTLEVTATKITRLPA--EIGDLKQLKTLDVSENREITELP-KEIGKLQHLK 688
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
L +S TG+ + + LQ+L LD+ G +++L + + L L LD+ G+
Sbjct: 689 TLDMSCTGIR-ELPKEIGKLQHLETLDISGTWISELP-KEIGNLQHLVTLDVKGTTGIKE 746
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLP----NISSLECLNLSNCTIDSILEGNENKAPLAKI 259
+ RL++L+L++T +TK+P + LE LNL++ + + N L +
Sbjct: 747 LPPEISNLQRLAYLDLSYTQITKMPRDIGKLQHLETLNLTSTNLTELPREISNLKWLVYL 806
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
+L GT ++ L +LD+ N+ + + ++ L++L +G +E
Sbjct: 807 NLYGTAITKVPRDIGKLQH--LEYLDLGNTKVRKIP--REIGGLQNLKYLKDDVGMQPIE 862
Query: 320 ---------MVACVGANLRNLNLSNT---RFSSAGVGILAG--------HLP-------- 351
+ CV +N NL ++ S G+ G H+P
Sbjct: 863 AAQLPKLEGLPKCVRQACKNSNLVSSLAGEILSFMAGVDGGLINHTKHMHIPQWIKEHFN 922
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
N+ L + ++++ + + MP+L+++ + + +G E LVLS
Sbjct: 923 NIGFLDIRICKLEEQDLKILREMPNLQWLKLRFDGVPRKPIVIGREGFLVLS 974
>gi|116109772|gb|ABJ74265.1| CG11136-like protein [Drosophila affinis]
Length = 453
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 269 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGA 326
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I + + V +
Sbjct: 145 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKIKALGTADFVGLI-- 202
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 384
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 203 NLVYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 261
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 262 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 310
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 501
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 311 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 369
>gi|228938544|ref|ZP_04101152.1| Internalin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228971423|ref|ZP_04132049.1| Internalin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978036|ref|ZP_04138415.1| Internalin [Bacillus thuringiensis Bt407]
gi|228781697|gb|EEM29896.1| Internalin [Bacillus thuringiensis Bt407]
gi|228788290|gb|EEM36243.1| Internalin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228821142|gb|EEM67159.1| Internalin [Bacillus thuringiensis serovar berliner ATCC 10792]
Length = 766
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|116109774|gb|ABJ74266.1| CG11136-like protein [Drosophila pseudoobscura]
Length = 472
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 269 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 326
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 138 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 195
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 384
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 196 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 254
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 255 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 303
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 501
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 304 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 362
>gi|423472694|ref|ZP_17449437.1| hypothetical protein IEM_03999 [Bacillus cereus BAG6O-2]
gi|402427629|gb|EJV59734.1| hypothetical protein IEM_03999 [Bacillus cereus BAG6O-2]
Length = 752
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 244 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 299
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 389
+ V L + N+ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 300 N--VAPLT-EMKNVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 354
Query: 390 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 430
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 355 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 412
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
LS +L L+L N L D++ LSSL L L +
Sbjct: 413 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 447
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 24/200 (12%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 338
L LD+SN+ ++ LT+MK + L L+ + I D VA + L LN++N +
Sbjct: 288 LESLDLSNNKITNVAPLTEMKNVTSLYLAGNQIED-----VAPLAKMEQLDYLNVANNKI 342
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 393
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 343 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 399
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 400 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 455
Query: 454 QLSSLSKLTNLS-----IRD 468
+S+L KL LS IRD
Sbjct: 456 PVSNLKKLVFLSFVANEIRD 475
>gi|168704685|ref|ZP_02736962.1| hypothetical protein GobsU_34430 [Gemmata obscuriglobus UQM 2246]
Length = 227
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 104 TSSALWALTG---MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
T +AL AL + ++ D +RC T+ G+ L + L +L L ++ LT + +
Sbjct: 62 TDAALAALKKRPQVGAVEVFDATRC---TEKGLVVLKDLPELRRLALGKSDLTLARVNAI 118
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNL 219
+ + L L L G ++D L L+ LT+LE LDL +QV+++G A +K RL L L
Sbjct: 119 AKCKELRDLRLPGAGLSDPELAPLKALTRLEQLDLSENAQVTDKGMATVKTLERLRGLYL 178
Query: 220 AWTGVTK--LPNISSLECL 236
A TG+T L + LE L
Sbjct: 179 AKTGLTDKGLAELKGLEGL 197
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L L +T L++LDLS +VTD GM + ++ L L+L++TGLT G+A L L+ L
Sbjct: 139 LAPLKALTRLEQLDLSENAQVTDKGMATVKTLERLRGLYLAKTGLTDKGLAELKGLEGLR 198
Query: 168 VLDLGGLPVT 177
L +GG VT
Sbjct: 199 SLYVGGTKVT 208
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 24/137 (17%)
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 462
L L++L L RL L ++ ++ A + ++ KEL L L A L+D L L +L++L
Sbjct: 90 GLVVLKDLPELRRLALGKSDLTLARVNAIAKCKELRDLRLPGAGLSDPELAPLKALTRLE 149
Query: 463 NLSI-RDAVLTNSGLGSFKPPRSLKLLDLH-----------------------GGWLLTE 498
L + +A +T+ G+ + K L+ L L GG +T
Sbjct: 150 QLDLSENAQVTDKGMATVKTLERLRGLYLAKTGLTDKGLAELKGLEGLRSLYVGGTKVTA 209
Query: 499 DAILQFCKMHPRIEVWH 515
DA QF P + V
Sbjct: 210 DAAEQFADDMPNLRVVR 226
>gi|196229524|ref|ZP_03128389.1| hypothetical protein CfE428DRAFT_1554 [Chthoniobacter flavus
Ellin428]
gi|196226756|gb|EDY21261.1| hypothetical protein CfE428DRAFT_1554 [Chthoniobacter flavus
Ellin428]
Length = 472
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 162/358 (45%), Gaps = 33/358 (9%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
+T L EL LS +V+DA ++ L + L L L+ L+ LL +L L L L
Sbjct: 121 LTDLPELSLSG-EQVSDAVLEKLRTFRLLGNLTLANLKLSPASHNLLLALPELHELHLIA 179
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
D L+++ KL+ L L +++ G A+L P L L L+ P + L
Sbjct: 180 TDTNDQTLKTIVQCRKLKSLHLDTLPITDDGLAILTKLPLLEELELSNLEKLGSPGFAHL 239
Query: 234 -ECLNLSNCTID--SILEGN-ENKA---PLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
+C L + + SIL G EN A L +SL GT + A L T L S LD
Sbjct: 240 VDCHGLKSLYVSGFSILSGMVENIARCKNLETLSLLGTELKDAGIAPLSALTKLHS-LDC 298
Query: 287 SNSSLSRFCFLT--QMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLN--LSNTRFSSA 341
S S +S F L L+L + DD++ + + L LN L+++ F+ A
Sbjct: 299 SGSGVSGTAFAAWPVRSQLTSLNLDRTPGVDDAICKNIEHAFPKLEYLNVKLADSGFTPA 358
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETD 399
G GILA L +L L+L G I+D ++ ++ +L + I + KG +
Sbjct: 359 GAGILA-RLHSLHTLNLGGAGINDEVVAQLARNDALNMLAIPMAQLSEKGVV-------- 409
Query: 400 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN--ASLTDVSLHQL 455
AL + HL L+L V+DA + + KEL L++ AS T++ LH++
Sbjct: 410 ------ALAKIPHLNELSLNVPPVTDAAVKAFARCKELKTLNIGKDAASDTELKLHKV 461
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 164/433 (37%), Gaps = 62/433 (14%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+++W G + ++ S V AG K L + E L AD A+L L +
Sbjct: 68 ASVWIKKGQDAVVQIKSSAEV----AGQKVALVRVEFPAQYPDEKPLAADDYAILDFLTD 123
Query: 166 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L L L G V+D VL L+ L L L ++S +L P L L+L T
Sbjct: 124 LPELSLSGEQVSDAVLEKLRTFRLLGNLTLANLKLSPASHNLLLALPELHELHLIATDTN 183
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 285
+ ++C L + +D++ P+ LA I + L
Sbjct: 184 DQTLKTIVQCRKLKSLHLDTL--------PITDDGLA----ILTKLPLLEELELSNLEKL 231
Query: 286 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA-CVGANLRNLNLSNTRFSSAGVG 344
S F L L+ L +S I VE +A C NL L+L T AG+
Sbjct: 232 GSPG----FAHLVDCHGLKSLYVSGFSILSGMVENIARC--KNLETLSLLGTELKDAGIA 285
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSM--------------------------MPSLK 378
L+ L L L SG+ + A + + P L+
Sbjct: 286 PLSA-LTKLHSLDCSGSGVSGTAFAAWPVRSQLTSLNLDRTPGVDDAICKNIEHAFPKLE 344
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
++++ D GF GA L L+ L LNL ++D + L+ L
Sbjct: 345 YLNVKLAD-SGF-TPAGAGI--------LARLHSLHTLNLGGAGINDEVVAQLARNDALN 394
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
L++ A L++ + L+ + L LS+ +T++ + +F + LK L++ G
Sbjct: 395 MLAIPMAQLSEKGVVALAKIPHLNELSLNVPPVTDAAVKAFARCKELKTLNI--GKDAAS 452
Query: 499 DAILQFCKMHPRI 511
D L+ K+ P++
Sbjct: 453 DTELKLHKVLPQL 465
>gi|423647357|ref|ZP_17622927.1| hypothetical protein IKA_01144 [Bacillus cereus VD169]
gi|401286175|gb|EJR92008.1| hypothetical protein IKA_01144 [Bacillus cereus VD169]
Length = 760
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|195154022|ref|XP_002017922.1| GL17042 [Drosophila persimilis]
gi|194113718|gb|EDW35761.1| GL17042 [Drosophila persimilis]
Length = 806
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 269 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 326
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 183 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 240
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 384
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 241 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 299
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 300 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 348
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 501
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 349 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 407
>gi|195121256|ref|XP_002005136.1| GI19235 [Drosophila mojavensis]
gi|193910204|gb|EDW09071.1| GI19235 [Drosophila mojavensis]
Length = 545
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 355 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 414
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 415 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGML 474
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ SL L L++G +TD L++L + L+ L+ +DL+G +Q+S++G ++ P+L
Sbjct: 475 KIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKL 534
Query: 215 SFLNLA 220
LNL
Sbjct: 535 QKLNLG 540
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 137/330 (41%), Gaps = 70/330 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SLN++ C V L + LK LDLS C ++TD +
Sbjct: 243 LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGR-------------- 288
Query: 150 TGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDL---WGSQVSNR 203
+ L+NL L+LGG + T L+L + L KL +L+L W +S++
Sbjct: 289 ---------IAQHLKNLETLELGGCCNITNTGLLLIAWG-LKKLRHLNLRSCW--HISDQ 336
Query: 204 GAAVLKMFPRLSF---LNLAWTGVTKLPNIS------------SLECLNLSNC--TIDSI 246
G L F R + L L + G+ +S SL+ +NLS C DS
Sbjct: 337 GIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSG 396
Query: 247 LEGNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+ L +++L I++ A+L S ++ LDVS FC +AL H
Sbjct: 397 LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVS------FCDKISDQALTH 450
Query: 306 ----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 354
L L+ I D + +A L NLN+ +R + G+ LA L NL+
Sbjct: 451 IAQGLYRLRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLK 510
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G TQ+ I + +P L+ +++
Sbjct: 511 TIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 540
>gi|104646925|gb|ABF74086.1| disease resistance protein [Arabidopsis thaliana]
gi|104646929|gb|ABF74088.1| disease resistance protein [Arabidopsis thaliana]
gi|104646935|gb|ABF74091.1| disease resistance protein [Arabidopsis thaliana]
gi|104646951|gb|ABF74099.1| disease resistance protein [Arabidopsis thaliana]
gi|104646959|gb|ABF74103.1| disease resistance protein [Arabidopsis thaliana]
gi|104646961|gb|ABF74104.1| disease resistance protein [Arabidopsis thaliana]
gi|104646983|gb|ABF74115.1| disease resistance protein [Arabidopsis thaliana]
gi|104646989|gb|ABF74118.1| disease resistance protein [Arabidopsis thaliana]
gi|104647017|gb|ABF74132.1| disease resistance protein [Arabidopsis thaliana]
gi|104647023|gb|ABF74135.1| disease resistance protein [Arabidopsis thaliana]
gi|104647027|gb|ABF74137.1| disease resistance protein [Arabidopsis thaliana]
gi|104647035|gb|ABF74141.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|384251251|gb|EIE24729.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 498
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 120/295 (40%), Gaps = 50/295 (16%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGM----KHLLSISTLEKLWLSETGLTADGIA 158
+T + L +L GMT L LDLS ++DA M +HL + L+
Sbjct: 207 ITHAGLRSLCGMTQLTALDLSGHAAISDASMAEIARHLTRLIDLD--------------- 251
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
L+ + + G VTD + +L LT LE + L +QV G A L PRL L
Sbjct: 252 ----LRRPACDNPGAAVVTDAGIAALASLTLLESVRLSQAQVGQAGCAALASLPRLRCLE 307
Query: 219 LAW------TGVTKLPNISSLECLNLSNC------TIDSILEGNENKAPLAKISLAGTTF 266
L++ T V +L + L L+L+ C + +++ G L ++ L+
Sbjct: 308 LSYCDSLSDTPVCELTRLRHLSELSLAGCASVTDIAVTALVRGMPE---LMRLDLSACHM 364
Query: 267 INEREAFLYIET-------SLLSFLDVSNSSLSRFCFLTQMKALEHLDL-SSSMIGDDSV 318
+ I T L S VS+ + C AL HLD+ I D
Sbjct: 365 HVGDISLYAIATLPNLQVLRLHSCERVSDMGIGGLCSGAAAAALTHLDVRGCERISDAGA 424
Query: 319 EMVACVGANLRNLNLSNTRF-SSAGVGILAGHLPNLEILSLSGT--QIDDYAISY 370
+ L+ L+L + G+ L+G LP+LEIL + GT D +A +
Sbjct: 425 TSIGRCLKQLQYLSLEHCHLIGDRGIRTLSG-LPHLEILRVGGTGATTDSFAQDF 478
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRC-VK 127
+EL +S+ + L R+L L++A C VT A+ AL GM L LDLS C +
Sbjct: 306 LELSYCDSLSDTPVCELTRLRHLSELSLAGCASVTDIAVTALVRGMPELMRLDLSACHMH 365
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSS---LQNLSVLDLGGLP-VTDLVLR 182
V D + + ++ L+ L L +D GI L S L+ LD+ G ++D
Sbjct: 366 VGDISLYAIATLPNLQVLRLHSCERVSDMGIGGLCSGAAAAALTHLDVRGCERISDAGAT 425
Query: 183 SL-QVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVT 225
S+ + L +L+YL L + +RG L P L L + TG T
Sbjct: 426 SIGRCLKQLQYLSLEHCHLIGDRGIRTLSGLPHLEILRVGGTGAT 470
>gi|384185344|ref|YP_005571240.1| internalin [Bacillus thuringiensis serovar chinensis CT-43]
gi|410673634|ref|YP_006926005.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452197655|ref|YP_007477736.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|326939053|gb|AEA14949.1| internalin [Bacillus thuringiensis serovar chinensis CT-43]
gi|409172763|gb|AFV17068.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452103048|gb|AGF99987.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 760
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|326493262|dbj|BAJ85092.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 21 GESVQKWRR-QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSVD 79
G ++W R Q RL A S+LR L R FP +LE+ + + +D
Sbjct: 39 GLVCRRWLRIQSSERRRLRARAGPSMLRRLAAR---FPGILELDLSQSPSRSFY-PGVID 94
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHLLS 138
+ G F LR L + +C+ +T + L G+ CL+ LD+S C K++D G+K + S
Sbjct: 95 DDLNVIAGGFCNLRVLALQNCKGITDVGMVKLGEGLPCLQTLDVSHCKKLSDKGLKVVAS 154
Query: 139 -ISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGL-PVTDLVLRSL-QVLTKLEYL 193
L +L ++ L D + A+ S NL L GL +TD + +L K++ L
Sbjct: 155 GCRKLRQLHIAGCRLITDNLLRAMSKSCLNLEELGAAGLNSITDAGISALADGCHKMKSL 214
Query: 194 DL 195
D+
Sbjct: 215 DI 216
>gi|198458315|ref|XP_001360988.2| GA10784 [Drosophila pseudoobscura pseudoobscura]
gi|198136299|gb|EAL25564.2| GA10784 [Drosophila pseudoobscura pseudoobscura]
Length = 806
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 269 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 326
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 183 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 240
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 384
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 241 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 299
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 300 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 348
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 501
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 349 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 407
>gi|254411467|ref|ZP_05025244.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181968|gb|EDX76955.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 577
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 178/378 (47%), Gaps = 56/378 (14%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L+G+T L EL LS ++T+ + L + L +L+LS + I+ LS L NL+ L
Sbjct: 218 SLSGLTNLTELYLSNN-QITEVNLSGL---TNLRRLYLSTNQII--DISPLSGLTNLTEL 271
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT---GVTK 226
DL + D+ L LT L LDL +Q+ + + L L+ L L+ ++
Sbjct: 272 DLKYNQIKDV--SPLSGLTNLTELDLKYNQI--KDVSPLSGLTNLTGLYLSSNQIKDISP 327
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAK-ISLAGTTFINEREAFLYIETSLLSF-- 283
L +++L L LS+ I I +PL+ I+L G + + + + L++
Sbjct: 328 LSGLTNLTLLYLSDNKIKDI-------SPLSGLINLTGLDLGSNKIKDISPLSGLINLTG 380
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
LD+S++ + L+ + L L ++ I + S+ + NL L L N + +
Sbjct: 381 LDLSSNKIKDISPLSGLTNLTWFSLDNNQITEVSLSGLT----NLTELYLRNNQITDVSS 436
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
L NL L L+ QI D +S +S + +L +++SN I TD+ LS
Sbjct: 437 ---LSELTNLTRLVLNNNQITD--VSPLSGLTNLTVLNLSNNQI----------TDVSLS 481
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L +L LNL Q++D + PLS L L+L + +TDVS+ LS LTN
Sbjct: 482 -----GLTNLTVLNLSNNQITDVS--PLSGLTNLTGLNLISNQITDVSI-----LSGLTN 529
Query: 464 LSIRDAVLTNSGLGSFKP 481
L++ +L+N+ + P
Sbjct: 530 LTV--LILSNNQIKDVSP 545
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 54/300 (18%)
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL---AWTGVTKLPNISS 232
+TD+ L LT L L LWG+Q+ + L L+ LNL VT L +++
Sbjct: 82 ITDI--SPLSGLTNLIGLSLWGNQI--KDVTPLSELTNLTELNLYNNQIKDVTPLSELTN 137
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 292
L LNL N I + PL+ IN L+ ++ ++
Sbjct: 138 LTELNLYNNQIKDV-------TPLSG-------LINLTRLILF------------SNQIT 171
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLP 351
L+ + L L L ++ I +++ G ANL LNL N + + L+G L
Sbjct: 172 DITPLSGLTNLTELSLDNNQI----IDVTPLSGLANLTELNLYNNQITEVS---LSG-LT 223
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQVGAETDLVLSLTA 406
NL L LS QI + +S ++ + L + IDIS + ++ + + + ++
Sbjct: 224 NLTELYLSNNQITEVNLSGLTNLRRLYLSTNQIIDISPLSGLTNLTELDLKYNQIKDVSP 283
Query: 407 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L L +L L+L+ Q+ D + PLS L L L + + D+ S LS LTNL++
Sbjct: 284 LSGLTNLTELDLKYNQIKDVS--PLSGLTNLTGLYLSSNQIKDI-----SPLSGLTNLTL 336
>gi|229029099|ref|ZP_04185198.1| Internalin [Bacillus cereus AH1271]
gi|228732379|gb|EEL83262.1| Internalin [Bacillus cereus AH1271]
Length = 772
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLVEMKNVKSLYLSGNQIED--VTALAKM-EQLGYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 390
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL +L L L N L D++
Sbjct: 391 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLVKMTQLTELDLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ + + N++ L LSG QI+D
Sbjct: 305 TNVAPLV---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLGYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 374 KPLYSLPLKDLVLT 387
>gi|156549435|ref|XP_001603185.1| PREDICTED: chaoptin-like [Nasonia vitripennis]
Length = 1358
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 167/406 (41%), Gaps = 59/406 (14%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
LK L++S + +T+ HL + L+ L LS + G + SSL +L LDL +
Sbjct: 302 LKFLNISNNL-ITELERSHLTDLRDLQVLDLSRNSIARLGANVFSSLASLVQLDLSFNAL 360
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
+ S + LT L++L L + + +A L P L L+L + + L S E
Sbjct: 361 RTIEESSFEGLTNLKWLSLQDNNILLVPSAALSRLPSLIHLHLEFNRIADL----SSEIF 416
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGT-TFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
S + ISL+ T + E A L+ F
Sbjct: 417 RASVPRL---------------ISLSLTRNLVRELPARLF------------------FH 443
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F L +DLS +MI S + V L L+LS R +S G L NL
Sbjct: 444 F----DKLMSIDLSGNMIPTVSQQTFLGVEDTLIFLDLSYNRLTSVG----ELQLRNLVS 495
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET--DLVLSLTALQNLNHL 413
L+L+G Q+ + + L++++IS+ + G V T L +S T LQ L +
Sbjct: 496 LNLAGNQLRKVSPETFKHLQRLQYLNISDNPLYGGFPPVFPRTLLSLDVSRTGLQVLPAI 555
Query: 414 ERLNLEQTQVSDAT-----LFPLSTFKELIHLS---LRNASLTDVSLHQLSSLSKLTNLS 465
LNLE + T L TFK ++LS L N ++T++ + L+ L +L+
Sbjct: 556 LLLNLEYLETVSLTGNKLQLLSEGTFKNHLNLSSIDLSNNAITELGNGTFAGLANLYSLN 615
Query: 466 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 511
+ L G F L+LLDL L ED +HPR+
Sbjct: 616 LSANKLRVFGGEHFDTGTGLQLLDLSNNLL--EDLTTTAFLIHPRL 659
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 166/396 (41%), Gaps = 45/396 (11%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 187
+++ K+ L++S+++ LS +T G + L NL L+L +
Sbjct: 576 LSEGTFKNHLNLSSID---LSNNAITELGNGTFAGLANLYSLNLSANKLRVFGGEHFDTG 632
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-----ISSLECLNLSNCT 242
T L+ LDL + + + + PRL +NLA +T N + LE L+LS+
Sbjct: 633 TGLQLLDLSNNLLEDLTTTAFLIHPRLRSVNLAGNRLTSFTNDLIKTLQFLERLDLSSNR 692
Query: 243 IDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQ 299
+ + E ++ L ++SLA + I E + ++ L LD+S + L L
Sbjct: 693 LTVVKEFTFSQVSRLRELSLA-SNLIESVEELAFHNSTQLQRLDLSRNRLESLNERMLEG 751
Query: 300 MKALEHLDLSSSMIGD--DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 357
+ LE DL+ + + +S+ + A +L ++NLS RF+ + L +L L
Sbjct: 752 ISRLEKFDLTDNRLSSLPESI-LDASRVRSLESINLSGNRFAEIPIRALERQTAHLTDLR 810
Query: 358 LSGTQIDDYAISYMSMMPSLKFIDISNTD-----IKGFIQQVGAETDLVLSLTALQNLNH 412
+S ++ + I ++ +K +DIS + G + +
Sbjct: 811 ISRNRLSE--IFTQDVINKVKLLDISENSLSEKAVAGLLNEAKV---------------- 852
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
L LN+ +S T + HL+L N L + H L + L L + + L
Sbjct: 853 LRTLNVANCGISRVTKLEAPFLR---HLNLSNNQLESIEQHALERTTMLEELIVSNNRLK 909
Query: 473 --NSGLGSFKPPRSLKLLDLHGG--WLLTEDAILQF 504
NS +F +LK +D+ G +++E +++ F
Sbjct: 910 SFNSISSAFASLATLKQIDVSGNDIGIISEQSLVGF 945
>gi|104647019|gb|ABF74133.1| disease resistance protein [Arabidopsis thaliana]
gi|104647021|gb|ABF74134.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|423382828|ref|ZP_17360084.1| hypothetical protein ICE_00574 [Bacillus cereus BAG1X1-2]
gi|423530712|ref|ZP_17507157.1| hypothetical protein IGE_04264 [Bacillus cereus HuB1-1]
gi|401643688|gb|EJS61382.1| hypothetical protein ICE_00574 [Bacillus cereus BAG1X1-2]
gi|402446046|gb|EJV77910.1| hypothetical protein IGE_04264 [Bacillus cereus HuB1-1]
Length = 760
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVTPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VTPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L + D VLT
Sbjct: 368 KALYSLPLTDLVLT 381
>gi|229108157|ref|ZP_04237780.1| hypothetical protein bcere0018_4470 [Bacillus cereus Rock1-15]
gi|228675287|gb|EEL30508.1| hypothetical protein bcere0018_4470 [Bacillus cereus Rock1-15]
Length = 902
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 26/172 (15%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 341 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
AG L G L NL+ +S + + + +++ M L ++G
Sbjct: 346 AG---LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSK 386
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
+ ++ LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 387 NELVDLTPLSKLSGLQKLNLEENYISDIT--PLSQLTGLYDLKLGSNEIRDV 436
>gi|219821258|gb|ACL37750.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDALKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDALKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|395743765|ref|XP_003777984.1| PREDICTED: F-box/LRR-repeat protein 14-like, partial [Pongo abelii]
Length = 296
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 37/308 (12%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKHLL-SIST 141
A++ LR+LN++ C+++T S+L + + L+ L+L C +T+ G+ + +
Sbjct: 6 AFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQR 65
Query: 142 LEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L+ L L +D GI L+ + + G L + L L+ Q LT L +
Sbjct: 66 LKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLEQLTLQDCQKLTDLSLKHI----- 118
Query: 201 SNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
+RG L++ LSF ++ G+ L ++ SL LNL +C D+I + + +
Sbjct: 119 -SRGLTGLRLLN-LSFCGGISDAGLLHLSHMGSLRSLNLRSC--DNISDTGIMHLAMGSL 174
Query: 260 SLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQ-MKALEHLDLSSSMIGDDS 317
L+G +SF D V + SL+ ++ Q + L+ L L S I DD
Sbjct: 175 RLSGLD---------------VSFCDKVGDQSLA---YIAQGLDGLKSLSLCSCHISDDG 216
Query: 318 VEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMP 375
+ + LR LN+ R + G+ ++A HL L + L G T+I + ++ +P
Sbjct: 217 INRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLP 276
Query: 376 SLKFIDIS 383
LK +++
Sbjct: 277 CLKVLNLG 284
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 26/228 (11%)
Query: 68 EAIELRGENSVDAEWMAYLG-AFRYLRSLNVADCRRVTSSALWALTGMT------CL--K 118
E +EL G +++ + + + L+SLN+ CR ++ + L GMT CL +
Sbjct: 41 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 100
Query: 119 ELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDL----- 171
+L L C K+TD +KH+ ++ L L LS G +D G+ LS + +L L+L
Sbjct: 101 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 160
Query: 172 -GGLPVTDLVLRSLQVLTKLE--YLDLWGSQVSNRGAAVLKMFPRLSF--LNLAWTGVTK 226
+ L + SL+ L+ L+ + D G Q A L LS +++ G+ +
Sbjct: 161 ISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 219
Query: 227 LP-NISSLECLNLSNCT--IDSILE-GNENKAPLAKISLAGTTFINER 270
+ + L LN+ C D LE E+ + L I L G T I +R
Sbjct: 220 MVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKR 267
>gi|357511815|ref|XP_003626196.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501211|gb|AES82414.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 623
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 179/428 (41%), Gaps = 66/428 (15%)
Query: 83 MAYLG------AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ Y+G A L +++V+ C AL+ LKE+++ +C+ VTD G+ +
Sbjct: 146 LGYVGLEMLIKACPLLEAVDVSHCWGFGDREAAALSCGGKLKEINMDKCLGVTDIGLAKI 205
Query: 137 -LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ S LEKL L +D GI LLS +L+ LD+ L VT+ LRS+ L KLE
Sbjct: 206 AVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNESLRSIASLLKLEVF 265
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+ G + + L FL G L I C +S + S++ G+E
Sbjct: 266 IMVGCYLVDDAG--------LQFLE---KGCPLLKAIDVSRCNCVSPSGLLSVISGHE-- 312
Query: 254 APLAKISLAGTTFINEREAFLYIETSL---------LSFLDVSNSSLSRFCFL---TQMK 301
G IN + L LS + + +S F + K
Sbjct: 313 ---------GLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCK 363
Query: 302 ALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF-SSAGVGILAGHLPNLEILSLS 359
+L L LS IG ++ ++ VG NL L+L+ RF + A + +A PNL L L
Sbjct: 364 SLVELGLSKC-IGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLE 422
Query: 360 G----TQIDDYAI-SYMSMMPSLKFIDISNT-DIK-GFIQQVGAETDLVLSLTA------ 406
T+I Y I S M+ L D S DI ++ + L L L
Sbjct: 423 SCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIG 482
Query: 407 ----LQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLS 459
N L L+L + ++ D L L+T +L L+L + +TD L +S+L
Sbjct: 483 LAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNLG 542
Query: 460 KLTNLSIR 467
+L++ +R
Sbjct: 543 ELSDFELR 550
>gi|148379742|ref|YP_001254283.1| hypothetical protein CBO1782 [Clostridium botulinum A str. ATCC
3502]
gi|153933744|ref|YP_001384039.1| hypothetical protein CLB_1717 [Clostridium botulinum A str. ATCC
19397]
gi|153934807|ref|YP_001387581.1| hypothetical protein CLC_1725 [Clostridium botulinum A str. Hall]
gi|148289226|emb|CAL83321.1| putative surface protein [Clostridium botulinum A str. ATCC 3502]
gi|152929788|gb|ABS35288.1| leucine rich repeat protein [Clostridium botulinum A str. ATCC
19397]
gi|152930721|gb|ABS36220.1| leucine rich repeat protein [Clostridium botulinum A str. Hall]
Length = 1359
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 188/422 (44%), Gaps = 54/422 (12%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
+ + +KELD G++++ + LEKL LS T + I+LL L NL +++
Sbjct: 352 SDLENIKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKYLTNLREVNI 406
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
++D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++
Sbjct: 407 SNTSISDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLN 462
Query: 232 SLECLNLSNC--TIDSILEGNENK---APLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
SL L+LSNC T ++ L N + L+ I + G +NE + L +L +
Sbjct: 463 SLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQG-NLLNEINNISIL--GKLEYLSI 519
Query: 287 SNSSLSRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVACV-GANLRN 330
+N+++ L + L LD++ +IG++ V V +R
Sbjct: 520 ANTNVVNIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIRE 579
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
L ++ I L ++ L LSG I D + + M +L ++D+SN +I
Sbjct: 580 L------INNYSEPIYKRQLSSITKLELSGRGIVD--LQGLESMENLTYLDLSNNEISNI 631
Query: 391 --IQQVGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
I+++ LVL S+ +++L LE L+L + D T L +L L L
Sbjct: 632 DSIKKLINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGDIT--ALGGLSQLTRLDL 689
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
+ VS+ L L L LS+ + +++ G K SLK L L + D L
Sbjct: 690 SRNGI--VSISSLGGLINLQYLSLYENKISD-GEEYLKKLYSLKELYLKNSGISNFDVTL 746
Query: 503 QF 504
+
Sbjct: 747 AY 748
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 170/464 (36%), Gaps = 154/464 (33%)
Query: 36 RLPAHLADSLLRHLIRRRL------IFPSLLEVFK----HNA--------------EAIE 71
+P D + L+R+ + ++PS LE K HNA E +
Sbjct: 324 NIPIEFKDKVFEDLVRKEINKPSGYVYPSDLENIKELDFHNAHIEKLNGIENMTALEKLN 383
Query: 72 LRGENSVDAEWMAYLGAFR-------------------YLRSLNVADCR----------- 101
L G + D + YL R Y+R LN+
Sbjct: 384 LSGTDIKDISLLKYLTNLREVNISNTSISDITALESSIYIRYLNLNKTEITTLEVIKKFE 443
Query: 102 -----RVTSSALWALTGMTCLKELDLSRC----------------------VKVTDAGMK 134
V+ + + + + L ELDLS C +K+ +
Sbjct: 444 HIEKLYVSGTKISTIPNLNSLMELDLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQGNLLN 503
Query: 135 HLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ +IS L KL +LS I +L SL NL LD+ G D QVL L +
Sbjct: 504 EINNISILGKLEYLSIANTNVVNIDVLRSLVNLRKLDITGCTKID-----TQVLNHLSDV 558
Query: 194 DLWGSQVSNRGAAVLK-------------MFPR----LSFLNLAWTGVTKLPNISSLE-- 234
++ G+++ G VL+ ++ R ++ L L+ G+ L + S+E
Sbjct: 559 EIIGNEIVTFGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGRGIVDLQGLESMENL 618
Query: 235 -CLNLSN---CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 290
L+LSN IDSI IN ++ L+ +
Sbjct: 619 TYLDLSNNEISNIDSI-----------------KKLINLKKLVLH------------KNK 649
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--- 347
+ + + LE LDLS+++IGD + +G L L TR + GI++
Sbjct: 650 IGSIKVIESLTKLEELDLSNNLIGD-----ITALGG-LSQL----TRLDLSRNGIVSISS 699
Query: 348 -GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
G L NL+ LSL +I D Y+ + SLK + + N+ I F
Sbjct: 700 LGGLINLQYLSLYENKISD-GEEYLKKLYSLKELYLKNSGISNF 742
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 208/459 (45%), Gaps = 72/459 (15%)
Query: 41 LADSLLRHLIRRRLIFPSLLEVFKHNAEAI---ELRGENSVDAEWMAYLGAFRYLRSLNV 97
D +L IR LI ++K +I EL G VD + + + YL
Sbjct: 568 FGDKVLEREIRE-LINNYSEPIYKRQLSSITKLELSGRGIVDLQGLESMENLTYL----- 621
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
D S + ++ + LK+L L + K+ +K + S++ LE+L LS L D I
Sbjct: 622 -DLSNNEISNIDSIKKLINLKKLVLHKN-KI--GSIKVIESLTKLEELDLS-NNLIGD-I 675
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
L L L+ LDL + + + SL L L+YL L+ +++S+ G LK L L
Sbjct: 676 TALGGLSQLTRLDLSRNGI--VSISSLGGLINLQYLSLYENKISD-GEEYLKKLYSLKEL 732
Query: 218 NLAWTGVTK----LPNISSLECLNLSNCTIDSILEGNENKAPLAKI--SLAGTTFINERE 271
L +G++ L ++LE + + + D I+ + + LAKI + G +E
Sbjct: 733 YLKNSGISNFDVTLAYYNNLEKKDFTTNS-DFIVFDEKLDSDLAKIIREILGK---DENT 788
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
E ++ +D+S ++S+ +++ ++++I D ++ + NL ++
Sbjct: 789 NIYKSEVDTITDIDLSEDAISKLNISSKL-------TNTNIINLDGIQYFS----NLHSI 837
Query: 332 NLSNTRFSSAGVGILAG-----HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL G G L G L L L L G +++ ++ Y++ + SLK++ ++N +
Sbjct: 838 NL-------RGHGKLEGLQNLMPLRGLIKLDLQGREVNYISLYYINYLTSLKYLYLNNMN 890
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ G L+ L+NL L L+L +T +S+ ++ LS + L L L
Sbjct: 891 LTG-------------DLSFLENLTDLRVLDLSRTGISNISI--LSKLRNLNELYLGGNK 935
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 485
+TD LS L LTNL I+ ++ N+ + S R+L
Sbjct: 936 ITD-----LSYLENLTNL-IKLDLVGNNDITSIYALRNL 968
>gi|195383050|ref|XP_002050239.1| GJ20310 [Drosophila virilis]
gi|194145036|gb|EDW61432.1| GJ20310 [Drosophila virilis]
Length = 542
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 352 LEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 411
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 412 DNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDQGML 471
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ SL L L++G +TD L++L + L+ L+ +DL+G +Q+S++G ++ P+L
Sbjct: 472 KIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKL 531
Query: 215 SFLNLA 220
LNL
Sbjct: 532 QKLNLG 537
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 137/330 (41%), Gaps = 70/330 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SLN++ C V L + LK LDLS C ++TD +
Sbjct: 240 LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGR-------------- 285
Query: 150 TGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDL---WGSQVSNR 203
+ L+NL L+LGG + T L+L + L KL +L+L W +S++
Sbjct: 286 ---------IAQHLKNLETLELGGCCNITNTGLLLIAWG-LKKLRHLNLRSCW--HISDQ 333
Query: 204 GAAVLKMFPRLSF---LNLAWTGVTKLPNIS------------SLECLNLSNC--TIDSI 246
G L F R + L L + G+ +S SL+ +NLS C DS
Sbjct: 334 GIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSG 393
Query: 247 LEGNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+ L +++L I++ A+L S ++ LDVS FC +AL H
Sbjct: 394 LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVS------FCDKISDQALTH 447
Query: 306 ----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 354
L L+ I D + +A L NLN+ +R + G+ LA L NL+
Sbjct: 448 IAQGLYRLRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLK 507
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G TQ+ I + +P L+ +++
Sbjct: 508 TIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 537
>gi|423555811|ref|ZP_17532114.1| hypothetical protein II3_01016 [Bacillus cereus MC67]
gi|401196153|gb|EJR03099.1| hypothetical protein II3_01016 [Bacillus cereus MC67]
Length = 691
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 183 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 238
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 389
+ V L + N+ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 239 N--VAPLT-EMKNVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 293
Query: 390 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 430
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 294 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 351
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
LS +L L+L N L D++ LSSL L L +
Sbjct: 352 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 386
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 338
L LD+SN+ ++ LT+MK + L L+ + I D VA + L LN++N +
Sbjct: 227 LESLDLSNNKITNVAPLTEMKNVTSLYLAGNQIED-----VAPLAKMEQLDYLNVANNKI 281
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 393
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 282 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 338
Query: 394 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 453
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 339 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 394
Query: 454 QLSSLSKLTNLS-----IRDA 469
+S+L KL LS IRD
Sbjct: 395 PVSNLKKLVFLSFVANEIRDV 415
>gi|125534801|gb|EAY81349.1| hypothetical protein OsI_36521 [Oryza sativa Indica Group]
Length = 692
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 173/416 (41%), Gaps = 71/416 (17%)
Query: 136 LLSISTLEKLWLSETGLTADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
L+S+ LE L LS L +SSL+NL ++ G+P+T +V L +TKL+Y
Sbjct: 108 LISLEHLEHLDLSNNNLVGPAGRFPRFVSSLRNLIYINFSGMPLTGMVPPQLGNITKLQY 167
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG--- 249
LDL + G + T + L N+ +L L LSN + + +
Sbjct: 168 LDL------SHGIGMYS------------TDIQWLTNLPALRYLGLSNVNLSRVSDWPRV 209
Query: 250 -NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEH 305
N N L + L+G + + ++F + + L LD+S ++ ++ C+ + +L +
Sbjct: 210 VNMNSY-LIVLDLSGCSLTSASQSFSQLNLTRLEKLDLSYNNFNQPLASCWFWNLTSLTY 268
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI----LAGHLPNLEILSLSG- 360
LDL +++ + + + A L RFSS G I L +L NLEIL L G
Sbjct: 269 LDLIMNILPGQFPDSLGDMKA------LQVFRFSSNGHSIIMPNLLQNLCNLEILDLGGL 322
Query: 361 --TQIDDYAISYMSMMPS-LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 417
I + S M + ++ + + + +I G + T + L+ L+
Sbjct: 323 SSCNITELLDSLMHCLTKRIRKLYLWDNNITGTLP------------TGVGKFTSLDTLD 370
Query: 418 LEQTQVSDATLFPLSTFKEL--IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
L Q++ + + +S L I LSL N + +++ L+ L L +L++
Sbjct: 371 LSHNQLTGSVPYEISMLTSLAKIDLSLNNLT-GEITEEHLAGLKSLKSLNLYYNPYLKIV 429
Query: 476 LG-SFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 530
LG + PP L E A C++ P W + V I S G
Sbjct: 430 LGDEWLPPFRL------------EVARFGSCQLGPMFPSWLQWMVNIKELDIWSTG 473
>gi|22347572|gb|AAM95931.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 95
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 298 IS--PVSSLTKL 307
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 104 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 159
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 160 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 213
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 214 ASLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|85679238|gb|ABC72035.1| InlA [Listeria monocytogenes]
Length = 791
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 150
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDALKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 240
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 353 IS--PVSSLTKL 362
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 156 IDALKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 211
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 212 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 266
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 267 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 296
>gi|423481309|ref|ZP_17457999.1| hypothetical protein IEQ_01087 [Bacillus cereus BAG6X1-2]
gi|401146069|gb|EJQ53589.1| hypothetical protein IEQ_01087 [Bacillus cereus BAG6X1-2]
Length = 761
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 29/258 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVTN-AKIKDPSFFT---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + ++ V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 393 QLNQLQELWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNL 464
++D L+ +S L NL
Sbjct: 451 ISD-----LTPVSNLKNL 463
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F T +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVTNAKIKDPSFFTNLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
+ L L ++D VLT
Sbjct: 368 TPLYTLPLKDLVLT 381
>gi|332030619|gb|EGI70307.1| F-box/LRR-repeat protein 14 [Acromyrmex echinatior]
Length = 837
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 26/168 (15%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL--- 147
L L++ DC+R++ AL ++ G+T LK ++LS CV +TD+G+KHL +S+L +L L
Sbjct: 616 LEHLSLQDCQRLSDEALRHVSLGLTTLKSINLSFCVCITDSGVKHLARMSSLRELNLRSC 675
Query: 148 ---SETGLT--ADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVS 201
S+ G+ A+G + ++SL ++S D + D L + Q L L+ L L Q+S
Sbjct: 676 DNISDIGMAYLAEGGSRITSL-DVSFCD----KIGDQALVHISQGLFNLKSLSLSACQIS 730
Query: 202 NRGAAVLKMFPRLSFLNLAWTGV-------TKLPNISSLECLNLSNCT 242
+ G + L LN+ T ++ +L+C++L CT
Sbjct: 731 DEGICKIA----LETLNIGQCSRLTDRGLHTVAESMKNLKCIDLYGCT 774
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 130/319 (40%), Gaps = 82/319 (25%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
+ L L + C +T++ L + G+ LK LDL C V+D G+ HL ++
Sbjct: 554 LKNLEHLELGGCCNITNTGLLLIAWGLKKLKRLDLRSCWHVSDLGIAHLAGLNR------ 607
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAA 206
TADG +L++LS+ D L +D LR + + LT L+ ++
Sbjct: 608 ----ETADGNL---ALEHLSLQDCQRL--SDEALRHVSLGLTTLKSIN------------ 646
Query: 207 VLKMFPRLSF-LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 265
LSF + + +GV L +SSL LNL +C IS G
Sbjct: 647 -------LSFCVCITDSGVKHLARMSSLRELNLRSCD---------------NISDIGMA 684
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH----------LDLSSSMIGD 315
++ E S ++ LDVS FC +AL H L LS+ I D
Sbjct: 685 YLAE-------GGSRITSLDVS------FCDKIGDQALVHISQGLFNLKSLSLSACQISD 731
Query: 316 DSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSM 373
+ + +A L LN+ +R + G+ +A + NL+ + L G T+I + +
Sbjct: 732 EGICKIA-----LETLNIGQCSRLTDRGLHTVAESMKNLKCIDLYGCTKITTSGLERIMK 786
Query: 374 MPSLKFIDISNTDIKGFIQ 392
+P L D S F +
Sbjct: 787 LPQLSDDDSSQRSKDNFAR 805
>gi|195029419|ref|XP_001987570.1| GH21992 [Drosophila grimshawi]
gi|193903570|gb|EDW02437.1| GH21992 [Drosophila grimshawi]
Length = 815
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 269 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGA 326
+ AFL I+ L + N+ LS + L+ + +LE LDL+++ I + + VA
Sbjct: 191 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLSSLERLDLANNKIKALGTSDFVAL--N 248
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA--ISYMSMMPSLKFIDISN 384
NL L LSN + SS G L LE+L L G ++ DYA + +S+ SL+ +D++
Sbjct: 249 NLVYLELSNNQISSISQRTF-GSLRKLEVLKLGGNRLGDYAQGLKALSLCLSLRQLDLTA 307
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
++ G LS L L +LE LNL + + L+ F L+ LSLR+
Sbjct: 308 NNLNG-----------PLSEQTLPGLRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 356
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 501
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 357 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSASLQHLTRLTVLDLTHNFLRALTSDLI 415
>gi|343420997|emb|CCD18942.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 623
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 204/435 (46%), Gaps = 83/435 (19%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L L +LN+ C +T + +L ++ L+ LDLS C +TD L+S L +
Sbjct: 196 LSKLSRLETLNLMYCTGITDVSPLSL--ISNLRTLDLSHCTGITDVLPLSLMS--NLCSV 251
Query: 146 WLSE-TGLT-ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSN 202
+LS TG+T ++ LS L+ L+++ G +TD+ L L++LE L+L + + +++
Sbjct: 252 YLSHCTGITDVPPLSKLSRLETLNLMYCTG--ITDV--SPLSKLSRLETLNLMYCTGITD 307
Query: 203 RGAAVLKMFPRLSFLNLA-WTGVTKLP---NISSLECLNLSNCTIDSILEGNENKAPLAK 258
+ L + L L L+ TG+T +P +S LE LNL CT G + +PL+
Sbjct: 308 --VSPLSLMSNLCSLYLSHCTGITDVPPLSKLSRLETLNLMYCT------GITDVSPLSL 359
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSS-LSRFCFLTQMKALEHLDLS-SSMIGDD 316
+ S L LDVS + ++ L+ + L LDLS + I D
Sbjct: 360 M-------------------SRLEMLDVSGCTGITDVSPLSDLSNLRTLDLSYCTGITDV 400
Query: 317 S-----VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISY 370
S +E+ ANL + L++ S L + LE+L LSG T I D +S
Sbjct: 401 SPLSEIIEL-----ANLYMIGLTSITDVS-----LLKKVKKLEVLYLSGCTSITD--VSP 448
Query: 371 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLF 429
+S + L+ +D ++ TD ++ L L+ LE+L+L T ++D +
Sbjct: 449 LSTLSGLEKLD---------LRYCTGITD----VSPLSTLSGLEKLDLRYCTGITDVS-- 493
Query: 430 PLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
PLST L L L + +TDVS LS+LS+L L + + S + S R L+
Sbjct: 494 PLSTLSGLGKLDLSGCTGITDVS--PLSTLSRLETLDLSECPGVMSDVDSLCSLRMLR-- 549
Query: 489 DLHGGWLLTEDAILQ 503
+L L DA+L+
Sbjct: 550 ELRLSRLAINDAVLR 564
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 191/401 (47%), Gaps = 61/401 (15%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLT-ADGIALLSSLQNLSVLDLGGL 174
L+ LDLS C +TD L+ S L ++LS TG+T ++ LS L+ L+++ G
Sbjct: 18 LRTLDLSHCTGITDVLPLSLM--SNLCSVYLSHCTGITDVPPLSKLSRLETLNLMYCTG- 74
Query: 175 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPN 229
+TD + L L++LE L+L + + +++ + L RL LNL + T V+ L
Sbjct: 75 -ITD--VSPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSL 129
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSN 288
IS+L L+LS+CT G + PL+ +S + +++ + S LS L+ N
Sbjct: 130 ISNLRTLDLSHCT------GITDVLPLSLMSNLCSLYLSHCTGITDVPPLSKLSRLETLN 183
Query: 289 ----SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGV 343
+ ++ L+++ LE L+L G V ++ + +NLR L+LS+ T +
Sbjct: 184 LMYCTGITDVSPLSKLSRLETLNLMYC-TGITDVSPLSLI-SNLRTLDLSHCTGITDVLP 241
Query: 344 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN-TDIKGFIQQVGAETDLVL 402
L +L ++ + +G D +S +S + +L + + TD+
Sbjct: 242 LSLMSNLCSVYLSHCTGIT-DVPPLSKLSRLETLNLMYCTGITDV--------------- 285
Query: 403 SLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSK 460
+ L L+ LE LNL T ++D + PLS L L L + + +TDV LS LS+
Sbjct: 286 --SPLSKLSRLETLNLMYCTGITDVS--PLSLMSNLCSLYLSHCTGITDVP--PLSKLSR 339
Query: 461 LTNLSIRDAVLTNSGLGSFKP---PRSLKLLDLHGGWLLTE 498
L L++ + +G+ P L++LD+ G +T+
Sbjct: 340 LETLNL----MYCTGITDVSPLSLMSRLEMLDVSGCTGITD 376
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 86 LGAFRYLRSLNVADCRRVTS-SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
L L L++ C +T S L L+G L +LDLS C +TD + L ++S LE
Sbjct: 472 LSTLSGLEKLDLRYCTGITDVSPLSTLSG---LGKLDLSGCTGITD--VSPLSTLSRLET 526
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L LSE + L SL+ L L L L + D VLR + VL L LDL
Sbjct: 527 LDLSECPGVMSDVDSLCSLRMLRELRLSRLAINDAVLRDIVVLKCLRTLDL 577
>gi|160914190|ref|ZP_02076412.1| hypothetical protein EUBDOL_00199 [Eubacterium dolichum DSM 3991]
gi|158434001|gb|EDP12290.1| leucine Rich Repeat protein [Eubacterium dolichum DSM 3991]
Length = 481
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 44/266 (16%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ---NLSVLDLGGLPVTDLVLRS 183
K+T MK L+ +S + GI L L+ NL+ LDL + DL
Sbjct: 22 KITKEEMKKLIRLSA-----------RSCGIVSLEGLEYAENLTYLDLCANAIEDLT--P 68
Query: 184 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNL 238
++ L ++EYL++ + + R L+ F +L L NL ++ L + +LE LNL
Sbjct: 69 IKGLREIEYLNVSKNML--RDIQALRDFRQLVRLDLSRNNLYTMDISALAGMHNLEELNL 126
Query: 239 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD------VSNSSLS 292
C +D+++ EN L ++ + E F S+L LD ++ L
Sbjct: 127 ERCKVDNLMYL-ENVKKLKRLHVGI-----ENGPF---PLSILGMLDNLVEVHMNKMWLY 177
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
LT +K +E LDLS+++ D + + + LR+LNL+N + + +L PN
Sbjct: 178 DIADLTYLKKIEVLDLSTNLFRD--LSPLQYMKQTLRSLNLTNNMYLH-DLSMLK-EFPN 233
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLK 378
LEIL +S +DD+ S++ + +LK
Sbjct: 234 LEILEISYDSVDDF--SFLKELKNLK 257
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 165/416 (39%), Gaps = 83/416 (19%)
Query: 86 LGAFRYLRSLNVADCRR--VTSSALWALTGMTCLKELDLSRC------------------ 125
+ A R R L D R + + + AL GM L+EL+L RC
Sbjct: 88 IQALRDFRQLVRLDLSRNNLYTMDISALAGMHNLEELNLERCKVDNLMYLENVKKLKRLH 147
Query: 126 VKVTDA-------GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
V + + GM L + K+WL + IA L+ L+ + VLDL D
Sbjct: 148 VGIENGPFPLSILGMLDNLVEVHMNKMWLYD-------IADLTYLKKIEVLDLSTNLFRD 200
Query: 179 L--------VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV------ 224
L LRSL + + DL ++LK FP L L +++ V
Sbjct: 201 LSPLQYMKQTLRSLNLTNNMYLHDL----------SMLKEFPNLEILEISYDSVDDFSFL 250
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+L N+ L + C + L G L K+ ++ I+ E + L +
Sbjct: 251 KELKNLKELRATESNLCDM-RYLHG---LTKLEKLDVSSNRLIHTEEL---AQMKKLRYF 303
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
L FL K LE +++ ++ I V + C ++ +N + S+
Sbjct: 304 KACGCFLDNIDFLKDAKQLEEINVYNNRIKSIDV-LKGCEHMTTMDVGANNIKDISS--- 359
Query: 345 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGFIQQVG-----A 396
+ NLE + LS I D ++ + + +L ID+ N TD+ + V
Sbjct: 360 --LADMKNLECVGLSHNVITD--LTPLKDLTNLASIDLYNNVITDLTPLEKLVNLSSLRL 415
Query: 397 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 452
+ + V+ LT L++ +L L L+ VSD T PLS K L L L + + D+S+
Sbjct: 416 DHNGVMDLTPLEHCEYLSSLTLKANYVSDVT--PLSKLKHLYELRLDDNPIEDISM 469
>gi|343413823|emb|CCD21194.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 707
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 193/400 (48%), Gaps = 63/400 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L F LR L ++ C +T + L+ ++ L+ LDLS C +TD + L S+L
Sbjct: 13 VSPLSVFSSLRMLYLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITD--VSPLSVFSSL 68
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWG-SQ 199
EKL LS TG+T ++ LS L +L LDL +TD + L+KL L G S
Sbjct: 69 EKLDLSHCTGIT--DVSPLSKLSSLRTLDLSHCTGITD-----VSPLSKLSSLHTLGLSH 121
Query: 200 VSN-RGAAVLKMFPRLSFLNLA-WTGVT---KLPNISSLECLNLSNCTIDSILEGNENKA 254
+ + L L L+L+ TG+T L +SSL L LS+CT G + +
Sbjct: 122 CTGITDVSPLSKLSSLHTLDLSHCTGITDVSPLSELSSLRTLGLSHCT------GITDVS 175
Query: 255 PLAKIS------LAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKALEHLD 307
PL+++S L+ T I + + + L LD+S+ + ++ L+++ +L LD
Sbjct: 176 PLSELSSLRTLDLSHCTGITDVSPLSKLSS--LRTLDLSHCTGITDVSPLSKLSSLRTLD 233
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLS-GTQID 364
L S G V ++ + ++LR L+LS+ G+ ++ L +L L LS T I
Sbjct: 234 L-SHCTGITDVSPLSKL-SSLRTLDLSH----CTGITDVSPLSELSSLRTLGLSHCTGIT 287
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQV 423
D +S +S + SL+ +D+S+ G ++ L L+ L L+L T +
Sbjct: 288 D--VSPLSELSSLRTLDLSH--CTGITD-----------VSPLSELSSLRTLDLSHCTGI 332
Query: 424 SDATLFPLSTFKELIHLS-LRNASLTDVS-LHQLSSLSKL 461
+D + PLS L L L +TDVS L +LSSL L
Sbjct: 333 TDVS--PLSKLSSLRTLYFLYCTGITDVSPLSELSSLRTL 370
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 214/467 (45%), Gaps = 97/467 (20%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ ++ L+ LDLS C +TD + L +S+L
Sbjct: 174 VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITD--VSPLSKLSSL 229
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQV 200
L LS TG+T ++ LS L +L LDL +TD+ L L+ L L L S
Sbjct: 230 RTLDLSHCTGIT--DVSPLSKLSSLRTLDLSHCTGITDV--SPLSELSSLRTLGL--SHC 283
Query: 201 SN-RGAAVLKMFPRLSFLNLA-WTGVT---KLPNISSLECLNLSNCTIDSILEGNENKAP 255
+ + L L L+L+ TG+T L +SSL L+LS+CT G + +P
Sbjct: 284 TGITDVSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCT------GITDVSP 337
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSN----SSLSRFCF-----------LTQM 300
L+K+S T + FLY DVS SSL F L+++
Sbjct: 338 LSKLSSLRTLY------FLYCT----GITDVSPLSELSSLRTLYFSHCTGITDVSPLSEL 387
Query: 301 KALEHLDLS-SSMIGDDS----------VEMVACVG----------ANLRNLNLSNTRFS 339
L L LS + I D S ++ C G ++LR L+LS+
Sbjct: 388 SGLRMLYLSHCTGITDVSPLSVFSSLRMLDFSHCTGITDVSPLSKLSSLRTLDLSH---- 443
Query: 340 SAGVGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQ 392
G+ ++ L +L L LS T I D +S +S + SL+ +D+S+ TD+ +
Sbjct: 444 CTGITDVSPLSELSSLHTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSE 501
Query: 393 QVGAET-DL-----VLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA 445
T DL + ++ L L+ L L+L T ++D + PLS F L L L +
Sbjct: 502 LSSLCTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVS--PLSEFSSLHTLDLSHC 559
Query: 446 S-LTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+ +TDVS L +LSSL ++ NLS + S L F SL LDL
Sbjct: 560 TGITDVSPLSELSSL-RMLNLSHCTGITDVSPLSEFS---SLHTLDL 602
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 196/411 (47%), Gaps = 62/411 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L F L L+++ C +T + L+ ++ L+ LDLS C +TD + L +S+L
Sbjct: 59 VSPLSVFSSLEKLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITD--VSPLSKLSSL 114
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQV 200
L LS TG+T ++ LS L +L LDL +TD + L L+ L L L S
Sbjct: 115 HTLGLSHCTGIT--DVSPLSKLSSLHTLDLSHCTGITD--VSPLSELSSLRTLGL--SHC 168
Query: 201 SN-RGAAVLKMFPRLSFLNLA-WTGVT---KLPNISSLECLNLSNCTIDSILEGNENKAP 255
+ + L L L+L+ TG+T L +SSL L+LS+CT G + +P
Sbjct: 169 TGITDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTLDLSHCT------GITDVSP 222
Query: 256 LAKIS------LAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKALEHLDL 308
L+K+S L+ T I + + + L LD+S+ + ++ L+++ +L L L
Sbjct: 223 LSKLSSLRTLDLSHCTGITDVSPLSKLSS--LRTLDLSHCTGITDVSPLSELSSLRTLGL 280
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLS-GTQIDD 365
S G V ++ + ++LR L+LS+ G+ ++ L +L L LS T I D
Sbjct: 281 -SHCTGITDVSPLSEL-SSLRTLDLSH----CTGITDVSPLSELSSLRTLDLSHCTGITD 334
Query: 366 YA-ISYMSMMPSLKFIDISN-TDIKG----------FIQQVGAETDLVLSLTALQNLNHL 413
+ +S +S + +L F+ + TD+ + TD ++ L L+ L
Sbjct: 335 VSPLSKLSSLRTLYFLYCTGITDVSPLSELSSLRTLYFSHCTGITD----VSPLSELSGL 390
Query: 414 ERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 461
L L T ++D + PLS F L L + + +TDVS L +LSSL L
Sbjct: 391 RMLYLSHCTGITDVS--PLSVFSSLRMLDFSHCTGITDVSPLSKLSSLRTL 439
>gi|320166208|gb|EFW43107.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1869
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 167/406 (41%), Gaps = 62/406 (15%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL 160
++T+ A A TG+T L +L L ++T +S+L +L+L +TA +
Sbjct: 765 NQITTVAANAFTGLTALVQLQL-YGNQITTISASAFAGMSSLVQLYLYSNRITAIFVNAF 823
Query: 161 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
+ L +LS+LD+ +T L + LT + L L+ + +S P +F
Sbjct: 824 TGLTHLSLLDISNNQITSLPANAFTGLTAMTQLSLYNNSLS--------AVPSSAF---- 871
Query: 221 WTGVTKLPNISSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
TG+T +L+ L L N I S ++ + L ++ L G I A + S
Sbjct: 872 -TGLT------ALQALWLYNNQITSVVVNAFTSLTALVQLQLYGNQ-ITTIPASAFSGLS 923
Query: 280 LLSFLDVSN--------SSLSRFCFLTQMK------------------ALEHLDLSSSMI 313
LS L ++N S+ + LTQ++ AL L L + I
Sbjct: 924 KLSLLQLNNNWLSAIPSSAFTGLTALTQLQLYNNQITTVPSSAFTGLTALTQLSLYGNQI 983
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
S A + A L+ L L+N ++ AG L L L LSG+QI + S
Sbjct: 984 TTISASAFAGLTA-LQALYLNNNTITTIAANAFAG-LTALNWLDLSGSQITSIPANVFSS 1041
Query: 374 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 433
+P+L +++ N + + +A L L +L + +++ + +
Sbjct: 1042 LPALAQLNLYNNWLSA------------VPTSAFTGLTALTQLTMYGNRITTISANAFTG 1089
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 479
L+ L L++ +T +S + LS LT L + + +T +F
Sbjct: 1090 LNALVQLFLQSNQITTISASAFTGLSLLTQLYLSNNQITTISANAF 1135
>gi|104646997|gb|ABF74122.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 173/379 (45%), Gaps = 61/379 (16%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SV------LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF---- 216
S + L +P+ ++L+SL+ V G + LK FP +S+
Sbjct: 97 SCFYLTNCIQLKDIPI-GIILKSLET-------------VGMSGCSSLKHFPEISWNTRR 142
Query: 217 LNLAWTGVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFIN 268
L L+ T + +LP+ IS L CL ++S+C T+ S L + L ++L G +
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLE 199
Query: 269 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 328
L TSL + L+VS L+ F ++E L +S + I + + C + L
Sbjct: 200 NLPDTLQNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQL 255
Query: 329 RNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTD 386
R+L++S N R +S V I L +LE L LSG + + + + M L++ D+ T
Sbjct: 256 RSLDISENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTS 313
Query: 387 IKGFIQQVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PL 431
IK + +G + T + + ++ L L+ L + + + L PL
Sbjct: 314 IKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPL 373
Query: 432 STFKELIHLSLRNASLTDV 450
S F +L LSL N ++T++
Sbjct: 374 SRFDDLRALSLSNMNMTEI 392
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|423629712|ref|ZP_17605460.1| hypothetical protein IK5_02563 [Bacillus cereus VD154]
gi|401266846|gb|EJR72915.1| hypothetical protein IK5_02563 [Bacillus cereus VD154]
Length = 760
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|229144033|ref|ZP_04272449.1| Internalin [Bacillus cereus BDRD-ST24]
gi|228639430|gb|EEK95844.1| Internalin [Bacillus cereus BDRD-ST24]
Length = 755
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 273
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 330
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 293
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 317
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 363 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|116109776|gb|ABJ74267.1| CG11136-like protein [Drosophila miranda]
gi|116109778|gb|ABJ74268.1| CG11136-like protein [Drosophila miranda]
gi|116109780|gb|ABJ74269.1| CG11136-like protein [Drosophila miranda]
gi|116109782|gb|ABJ74270.1| CG11136-like protein [Drosophila miranda]
gi|116109784|gb|ABJ74271.1| CG11136-like protein [Drosophila miranda]
gi|116109786|gb|ABJ74272.1| CG11136-like protein [Drosophila miranda]
gi|116109788|gb|ABJ74273.1| CG11136-like protein [Drosophila miranda]
gi|116109790|gb|ABJ74274.1| CG11136-like protein [Drosophila miranda]
gi|116109792|gb|ABJ74275.1| CG11136-like protein [Drosophila miranda]
gi|116109794|gb|ABJ74276.1| CG11136-like protein [Drosophila miranda]
gi|116109796|gb|ABJ74277.1| CG11136-like protein [Drosophila miranda]
gi|116109798|gb|ABJ74278.1| CG11136-like protein [Drosophila miranda]
gi|116109800|gb|ABJ74279.1| CG11136-like protein [Drosophila miranda]
gi|116109802|gb|ABJ74280.1| CG11136-like protein [Drosophila miranda]
gi|116109804|gb|ABJ74281.1| CG11136-like protein [Drosophila miranda]
gi|116109806|gb|ABJ74282.1| CG11136-like protein [Drosophila miranda]
gi|116109808|gb|ABJ74283.1| CG11136-like protein [Drosophila miranda]
gi|116109810|gb|ABJ74284.1| CG11136-like protein [Drosophila miranda]
Length = 473
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 269 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 326
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 139 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 196
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 384
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 197 NLVYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 255
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 256 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 304
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 501
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 305 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 363
>gi|343423900|emb|CCD18013.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 648
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 207/455 (45%), Gaps = 104/455 (22%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR L ++ C +T + L+ ++ L+ LDLS C +TD + L S+L
Sbjct: 13 VSPLSKLSSLRMLYLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITD--VSPLSVFSSL 68
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDL----GGLPVTDLV----LRSLQV------- 186
EKL LS TG+T ++ LS L +L LDL G V+ L+ LR L +
Sbjct: 69 EKLDLSHCTGIT--DVSPLSKLSSLRTLDLSHCTGITNVSPLLKFSSLRMLDISHCTGIT 126
Query: 187 -------LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLPNI---SSLEC 235
L+ L LDL + +LK F L L+L+ TG+T + + SSL
Sbjct: 127 NVSPLSELSSLRTLDLSHCTGITDVSPLLK-FSSLHTLDLSHCTGITDVSPLLMFSSLRM 185
Query: 236 LNLSNCT-IDSI----------------LEGNENKAPLAKISLAGTTFINEREAFLYI-- 276
L++S+CT I ++ G N +PL+++S T I+ +
Sbjct: 186 LDISHCTGITNVSPLSKLSSLRTLYFLYCTGITNVSPLSELSSLRTLDISHCTGITDVSP 245
Query: 277 --ETSLLSFLDVSNSS-LSRFCFLTQMKALEHLDLS-----------SSMIGDDSVEMVA 322
E S L LD+S+ + +S L+++ AL+ LDLS S MIG + + +
Sbjct: 246 LSELSSLRMLDLSHCTDISNVSRLSKIIALQKLDLSHCTGVTDVSPLSKMIGLEKLYLSH 305
Query: 323 CVG----------ANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLS-GTQIDDYAIS 369
C G ++LR LNLS+ G+ ++ +L L LS T I D +S
Sbjct: 306 CTGITDVPPLSELSSLRMLNLSHC----TGITDVSPLSEFSSLHTLDLSHCTGITD--VS 359
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATL 428
+S + SL+ +D+S TD ++ L L+ L L+L T ++D +
Sbjct: 360 PLSELSSLRTLDLS---------HCTGITD----VSPLSELSSLCTLDLSHCTGITDVS- 405
Query: 429 FPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 461
PLS L L L + + +TDVS L +LSSL L
Sbjct: 406 -PLSKLSSLCTLELSHCTGITDVSPLSELSSLRTL 439
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 205/443 (46%), Gaps = 88/443 (19%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
F LR L+++ C +T+ + L+ ++ L+ LDLS C +TD + LL S+L L LS
Sbjct: 111 FSSLRMLDISHCTGITN--VSPLSELSSLRTLDLSHCTGITD--VSPLLKFSSLHTLDLS 166
Query: 149 E-TGLT-ADGIALLSSLQNLSVLDLGGLPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGA 205
TG+T + + SSL+ L + G +T++ L L L L +L + + ++N
Sbjct: 167 HCTGITDVSPLLMFSSLRMLDISHCTG--ITNVSPLSKLSSLRTLYFL--YCTGITN--V 220
Query: 206 AVLKMFPRLSFLNLA-WTGVT---KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL 261
+ L L L+++ TG+T L +SSL L+LS+CT S + L K+ L
Sbjct: 221 SPLSELSSLRTLDISHCTGITDVSPLSELSSLRMLDLSHCTDISNVSRLSKIIALQKLDL 280
Query: 262 AGTTFINEREAF--------LYI-------------ETSLLSFLDVSN-SSLSRFCFLTQ 299
+ T + + LY+ E S L L++S+ + ++ L++
Sbjct: 281 SHCTGVTDVSPLSKMIGLEKLYLSHCTGITDVPPLSELSSLRMLNLSHCTGITDVSPLSE 340
Query: 300 MKALEHLDLS-SSMIGDDS----------VEMVACVG----------ANLRNLNLSNTRF 338
+L LDLS + I D S +++ C G ++L L+LS+
Sbjct: 341 FSSLHTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVSPLSELSSLCTLDLSHC-- 398
Query: 339 SSAGVGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN----TDIKGFI 391
G+ ++ L +L L LS T I D +S +S + SL+ +D+S+ TD+
Sbjct: 399 --TGITDVSPLSKLSSLCTLELSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLS 454
Query: 392 QQVG------AETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 444
+ G + + ++ L L+ L LNL T ++D + PLS F L L L +
Sbjct: 455 ELSGLRMLYLSHCPSITDVSPLSELSSLRMLNLSHCTGITDVS--PLSEFSSLHILGLSH 512
Query: 445 AS-LTDVSLHQLSSLSKLTNLSI 466
+ +TDV S LSKL++L I
Sbjct: 513 CTGITDV-----SPLSKLSSLHI 530
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 31/189 (16%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTS-SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
++ L LR+L+++ C +T S L L+G L+ L LS C +TD + L +S+
Sbjct: 427 VSPLSELSSLRTLDLSHCTGITDVSPLSELSG---LRMLYLSHCPSITD--VSPLSELSS 481
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP----VTDLVLRSLQVLTKLEYLDLWG 197
L L LS GI +S L S L + GL +TD+ L+KL L + G
Sbjct: 482 LRMLNLSH----CTGITDVSPLSEFSSLHILGLSHCTGITDV-----SPLSKLSSLHILG 532
Query: 198 SQVSNRGAAVLKMFPRLSFLNL------AWTGVTKLPNISSLECLNLSNCTIDSILEGNE 251
V + + F L T V+ L +SSL L+LS+CT G
Sbjct: 533 LSHCTGITDVSPLTTIIGFEKLYLSNCTGITDVSPLSELSSLRTLDLSHCT------GIT 586
Query: 252 NKAPLAKIS 260
+ +PL+K+S
Sbjct: 587 DVSPLSKLS 595
>gi|290981600|ref|XP_002673518.1| predicted protein [Naegleria gruberi]
gi|284087102|gb|EFC40774.1| predicted protein [Naegleria gruberi]
Length = 399
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 153/342 (44%), Gaps = 48/342 (14%)
Query: 53 RLIFPSLLEVFKHNAEAIELRGENS-VDAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL 111
R + ++LE F + EL + S + E YL F+ L+ LN C + +L
Sbjct: 35 RSVGVAILENFPYLENLKELIIDGSYIGDENAIYLSKFKCLKRLNACSCN-LGPKSLQYF 93
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL-- 169
+ + L+EL L G+ HL + L+KL LS+ L+ D I LS + NL+ L
Sbjct: 94 SNLNSLEELTLP--YNKVSGGLYHLKKLKGLKKLDLSKNVLSMDDIEQLSEISNLNHLNL 151
Query: 170 ---DLGG--------LPVTDLVLRSLQV----------LTKLEYLDLWGSQVSNRGAAVL 208
DLGG LP+ L L + + +T L L L+G+ + L
Sbjct: 152 NGVDLGGKCMEYISKLPLITLELEASNIDEIGLGNISQITTLSKLKLFGNNFGSESLRHL 211
Query: 209 KMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI-SLA 262
L +L+LA+ GV L + SLE L+LS I GN+ ++K+ +L+
Sbjct: 212 VKLSNLKYLSLAYNKIDDEGVEYLSLLQSLEYLSLSYNNI-----GNDGVQFISKLENLS 266
Query: 263 GTTFI----NEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDD 316
I +ER + L+ L++ + + +L++MK L+ LDL + I D
Sbjct: 267 QLELIRNRIDERGVQFISKMKNLTKLNLGENPIRNIGALYLSKMKQLKGLDLDGTKIDDF 326
Query: 317 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL---PNLEI 355
S+E + C+ NL+ LN+ T S V L L NLE+
Sbjct: 327 SIEHL-CLMKNLQYLNIERTNLSETKVETLKESLKLVKNLEL 367
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACV--------GANLRNLNLSN------------- 335
L+++ L HL+L+ +G +E ++ + +N+ + L N
Sbjct: 140 LSEISNLNHLNLNGVDLGGKCMEYISKLPLITLELEASNIDEIGLGNISQITTLSKLKLF 199
Query: 336 -TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----F 390
F S + L L NL+ LSL+ +IDD + Y+S++ SL+++ +S +I F
Sbjct: 200 GNNFGSESLRHLV-KLSNLKYLSLAYNKIDDEGVEYLSLLQSLEYLSLSYNNIGNDGVQF 258
Query: 391 IQQVGAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
I ++ + L L + + + +L +LNL + + + LS K+L L L
Sbjct: 259 ISKLENLSQLELIRNRIDERGVQFISKMKNLTKLNLGENPIRNIGALYLSKMKQLKGLDL 318
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 488
+ D S+ L + L L+I L+ + + + K SLKL+
Sbjct: 319 DGTKIDDFSIEHLCLMKNLQYLNIERTNLSETKVETLK--ESLKLV 362
>gi|293401961|ref|ZP_06646101.1| putative internalin A [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304619|gb|EFE45868.1| putative internalin A [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 481
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 161/374 (43%), Gaps = 80/374 (21%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++ + M+ L+S+S +S GL + NL LDL G + DL ++
Sbjct: 22 EIDEKAMERLVSLSARSAGIISLKGL--------DTAVNLQYLDLCGNSIEDL--DPIKD 71
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNC 241
L ++EYL+L + + R L+ + +L L NL ++ + + +LE LNL
Sbjct: 72 LREVEYLNLSKNML--RDIQALRGYRQLLRLDISRNNLYTMDISAIAGMINLEELNLERS 129
Query: 242 TIDSILEGNENKAPLAK--ISLAGTTF-------INEREAFLYIETSLLSFLDVSNSSLS 292
+D+++ EN L K IS+ F +NE + + L +D
Sbjct: 130 KVDNLVYL-ENAKKLHKLYISIENGPFPLSILGTLNELKELHMNKMWLYDIVD------- 181
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
LT +K +E LDLS+++ D + + + LR+LNL+N ++ S IL PN
Sbjct: 182 ----LTYLKNIEVLDLSTNLFSD--LSPLQYMKKTLRSLNLTNNQYLS-DCSILE-EFPN 233
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
LE+L LS I D++ F+ + Q G L L+ LN
Sbjct: 234 LEVLELSFDSIKDFS-----------FLKKLKNLKDLRLIQSGLS-----DLRILKGLNK 277
Query: 413 LERLNLEQTQVSDATLFP--------------------LSTFKELIHLSLRNASLTDVSL 452
LE+L++ + +V+ + L KEL+ +++ N S+TD+S+
Sbjct: 278 LEKLDISENRVTHTEVLKDMKNLRYFKASCCFLHDIDFLKNAKELVEVNVYNNSITDISV 337
Query: 453 HQLSSLSKLTNLSI 466
L K+T L +
Sbjct: 338 --LKGCEKMTALDV 349
>gi|219821387|gb|ACL37836.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|342181731|emb|CCC91210.1| putative leucine-rich repeat protein (LRRP) [Trypanosoma congolense
IL3000]
Length = 537
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 176/426 (41%), Gaps = 76/426 (17%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC---LKELDLSRCVKVTDAGMKHL 136
+ + LG YL L++ R T L G+ C L EL L CV +TD G H
Sbjct: 143 VKGVGELGRVPYLHILSL----RETGVTDQCLQGLCCSRSLVELSLESCVHITDVGPLH- 197
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
I TL+ + L GI L + L L + VTD L SL+ L + L
Sbjct: 198 -QIDTLKAINLDRCENVIKGIGELGKMPRLQTLSMRETRVTDETLYSLRNNYSLVEITLE 256
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPL 256
L+ T V+ L I +L+ +NL C ++++G PL
Sbjct: 257 CC--------------------LSITDVSPLSTIVTLQRINLGGCR--NVVKG---AGPL 291
Query: 257 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIG 314
+K+ L L V S+++ C L++ K+L LDLSS
Sbjct: 292 SKL-------------------PDLHELSVRGSAITDSCVSDLSESKSLRRLDLSSC--- 329
Query: 315 DDSVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
++ +++ C L ++LS R S GVG +A L L +LSL GT D + +S
Sbjct: 330 ENVTDVLPCCRIKLLEEIDLSRCRNISCGVGDMA-KLSLLRVLSLVGTNTSDNCLRMLST 388
Query: 374 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 433
++ +D+S F ++ +T + ++ LE L + + L
Sbjct: 389 NYNITVLDVS------FCGN-------LVDMTPIASIELLEVLRANGCKGVVRGVGGLGK 435
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHG 492
+ L LSL+ AS+ + SL L L L + LT+ + S ++L++L+L+G
Sbjct: 436 LRSLRELSLKEASIKNKSLDGLGESQSLVQLDLASCERLTD--VTSLSHVKTLEILNLNG 493
Query: 493 GWLLTE 498
+TE
Sbjct: 494 CKNVTE 499
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 146/363 (40%), Gaps = 73/363 (20%)
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----WTGVTKLPNISSLECLNLSNC- 241
++++ L GS+V++R + + L L + T ++ L ++ SLE + L C
Sbjct: 10 MSRMRERHLGGSRVTDRHLCNIGVGKDLVKLYIEACENITDISFLADVESLEEVTLEGCR 69
Query: 242 -TIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 299
+ I E + P L +SL T + + L SL+ L S + L+ +
Sbjct: 70 NVVRGIFE--LGRMPRLQTLSLKDTVVTDASLSGLRFSRSLVKLLVESCAQLTDVAPVAA 127
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
+K LE R GVG L G +P L ILSL
Sbjct: 128 VKTLEEA-------------------------RFDGCRNVVKGVGEL-GRVPYLHILSLR 161
Query: 360 GTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGA--------ETDLVLSLTAL 407
T + D + + SL + + + TD+ G + Q+ +++ + L
Sbjct: 162 ETGVTDQCLQGLCCSRSLVELSLESCVHITDV-GPLHQIDTLKAINLDRCENVIKGIGEL 220
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVS--------------- 451
+ L+ L++ +T+V+D TL+ L L+ ++L S+TDVS
Sbjct: 221 GKMPRLQTLSMRETRVTDETLYSLRNNYSLVEITLECCLSITDVSPLSTIVTLQRINLGG 280
Query: 452 -------LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 504
LS L L LS+R + +T+S + +SL+ LDL +T+ +L
Sbjct: 281 CRNVVKGAGPLSKLPDLHELSVRGSAITDSCVSDLSESKSLRRLDLSSCENVTD--VLPC 338
Query: 505 CKM 507
C++
Sbjct: 339 CRI 341
>gi|373451287|ref|ZP_09543212.1| hypothetical protein HMPREF0984_00254 [Eubacterium sp. 3_1_31]
gi|371968559|gb|EHO86014.1| hypothetical protein HMPREF0984_00254 [Eubacterium sp. 3_1_31]
Length = 481
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 161/374 (43%), Gaps = 80/374 (21%)
Query: 127 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
++ + M+ L+S+S +S GL + NL LDL G + DL ++
Sbjct: 22 EIDEKAMERLVSLSARSAGIISLEGL--------DTAVNLQYLDLCGNSIEDL--DPIKD 71
Query: 187 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNC 241
L ++EYL+L + + R L+ + +L L NL ++ + + +LE LNL
Sbjct: 72 LREVEYLNLSKNML--RDIQALRGYRQLLRLDISRNNLYTMDISAIAGMINLEELNLERS 129
Query: 242 TIDSILEGNENKAPLAK--ISLAGTTF-------INEREAFLYIETSLLSFLDVSNSSLS 292
+D+++ EN L K IS+ F +NE L L ++ L
Sbjct: 130 KVDNLVYL-ENAKKLHKLYISIENGPFPLSILGTLNE-----------LKELHMNKMWLY 177
Query: 293 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 352
LT +K +E LDLS+++ D + + + LR+LNL+N ++ S IL PN
Sbjct: 178 DIADLTYLKNIEVLDLSTNLFSD--LSPLQYMKKTLRSLNLTNNQYLS-DCSILE-EFPN 233
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
LE+L LS I D++ F+ + Q G L L+ LN
Sbjct: 234 LEVLELSFDSIKDFS-----------FLKKLKNLKDLRLIQSGLS-----DLRILKGLNK 277
Query: 413 LERLNLEQTQVSDATLFP--------------------LSTFKELIHLSLRNASLTDVSL 452
LE+L++ + +V+ + L KEL+ +++ N S+TD+S+
Sbjct: 278 LEKLDISENRVTHTEVLKDMKNLRYFKASCCFLHDIDFLKNAKELVEVNVYNNSITDISV 337
Query: 453 HQLSSLSKLTNLSI 466
L K+T L +
Sbjct: 338 --LKGCEKMTALDV 349
>gi|357511817|ref|XP_003626197.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501212|gb|AES82415.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 605
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 179/428 (41%), Gaps = 66/428 (15%)
Query: 83 MAYLG------AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
+ Y+G A L +++V+ C AL+ LKE+++ +C+ VTD G+ +
Sbjct: 146 LGYVGLEMLIKACPLLEAVDVSHCWGFGDREAAALSCGGKLKEINMDKCLGVTDIGLAKI 205
Query: 137 -LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ S LEKL L +D GI LLS +L+ LD+ L VT+ LRS+ L KLE
Sbjct: 206 AVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSYLKVTNESLRSIASLLKLEVF 265
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 253
+ G + + L FL G L I C +S + S++ G+E
Sbjct: 266 IMVGCYLVDDAG--------LQFLE---KGCPLLKAIDVSRCNCVSPSGLLSVISGHE-- 312
Query: 254 APLAKISLAGTTFINEREAFLYIETSL---------LSFLDVSNSSLSRFCFL---TQMK 301
G IN + L LS + + +S F + K
Sbjct: 313 ---------GLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCK 363
Query: 302 ALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF-SSAGVGILAGHLPNLEILSLS 359
+L L LS IG ++ ++ VG NL L+L+ RF + A + +A PNL L L
Sbjct: 364 SLVELGLSKC-IGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLE 422
Query: 360 G----TQIDDYAI-SYMSMMPSLKFIDISNT-DIK-GFIQQVGAETDLVLSLTA------ 406
T+I Y I S M+ L D S DI ++ + L L L
Sbjct: 423 SCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIG 482
Query: 407 ----LQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLS 459
N L L+L + ++ D L L+T +L L+L + +TD L +S+L
Sbjct: 483 LAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAMLNLAYCNRITDAGLKCISNLG 542
Query: 460 KLTNLSIR 467
+L++ +R
Sbjct: 543 ELSDFELR 550
>gi|296502010|ref|YP_003663710.1| internalin [Bacillus thuringiensis BMB171]
gi|423588187|ref|ZP_17564274.1| hypothetical protein IIE_03599 [Bacillus cereus VD045]
gi|296323062|gb|ADH05990.1| internalin [Bacillus thuringiensis BMB171]
gi|401226695|gb|EJR33229.1| hypothetical protein IIE_03599 [Bacillus cereus VD045]
Length = 760
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|366047663|gb|AEX08456.1| expression site-associated protein 8 [Trypanosoma brucei gambiense]
Length = 576
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 131/299 (43%), Gaps = 44/299 (14%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L+ L+++ C +T L A+ G+ L++L LS C VT G++ L S L KL +S
Sbjct: 248 LKVLDISSCHEITD--LTAIAGVRSLEKLSLSGCWNVT-KGLEELCKFSNLRKLDISGC- 303
Query: 152 LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-------VSN- 202
L +L +L NL VL + DL L++L LE L+L G V+N
Sbjct: 304 LVLGSAVVLKNLINLKVLSVSNCKNFKDL--NGLEILVNLEKLNLSGCHGVSSLGFVANL 361
Query: 203 --------RGAAVLKMFPRLSFLN----------LAWTGVTKLPNISSLECLNLSNCTID 244
G L F L LN ++T V + N+S + L+LS C
Sbjct: 362 SNLKELDISGCESLVCFDGLQDLNNLEVLYLRDVKSFTNVGAIKNLSKMRELDLSGCERI 421
Query: 245 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKAL 303
+ L G E L ++SL G I + + L L VS +L L ++ L
Sbjct: 422 TSLSGLETLKRLEELSLEGCGEIMSFDPIWSLHH--LRVLYVSECGNLEDLSGLQRLTGL 479
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSG 360
E L L IG + + + VG NLRNL +T + A + L G L NLE + LSG
Sbjct: 480 EELYL----IGCEEITTIGVVG-NLRNLKYLSTCW-CANLKELGGLERLVNLEKVDLSG 532
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 196/492 (39%), Gaps = 97/492 (19%)
Query: 24 VQKWRRQRRSLERLPAHLADSLLRHLIRRRLIFPSLL-EVFKHNAEAIELR-GENSVDAE 81
V++WR S R + RR P LL E+ E R G + +D
Sbjct: 29 VERWR-------------CPSCRRRIGGRRKANPHLLREIADVTMELKRYRKGRSGIDVT 75
Query: 82 WMA-YLGA---------FRYL--------RSLNVADCRRVTSSALWALTGMTCLKELDLS 123
MA LG FR L + LN++ C L +L + L++LDLS
Sbjct: 76 QMARKLGGGGVTTSSEIFRRLEGSKNGRWKMLNLSGCGSELQD-LTSLRDLEALEDLDLS 134
Query: 124 RCVKVTDAGMKHLLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLV 180
C + + L++ L KL + T + I LL L +L V + G VTD+
Sbjct: 135 ECSNLELRELMVALTLRNLRKLRMKRTMVNDMWCSSIGLLKFLVHLEVDESRG--VTDIT 192
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLEC 235
L L LE L L +G + P+L L+L T +T + L+
Sbjct: 193 --GLCRLKTLEALSLDSCINITKGFDKICALPQLMSLSLYQTNITDKDLRCIHPDGKLKV 250
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
L++S+C + L L K+SL+G + + L C
Sbjct: 251 LDISSCHEITDLTAIAGVRSLEKLSLSGCWNVTK--------------------GLEELC 290
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSS-AGVGILAGHLPNL 353
+ L LD+S ++ +V + + NL+ L++SN + F G+ IL NL
Sbjct: 291 ---KFSNLRKLDISGCLVLGSAVVLKNLI--NLKVLSVSNCKNFKDLNGLEILV----NL 341
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
E L+LSG ++ +++ + +LK +DIS G E+ ++ LQ+LN+L
Sbjct: 342 EKLNLSGCH-GVSSLGFVANLSNLKELDIS-----------GCES--LVCFDGLQDLNNL 387
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
E L L + S + + ++ L L SL L +L +L LS+
Sbjct: 388 EVLYLRDVK-SFTNVGAIKNLSKMRELDLSGCERI-TSLSGLETLKRLEELSLEGC---- 441
Query: 474 SGLGSFKPPRSL 485
+ SF P SL
Sbjct: 442 GEIMSFDPIWSL 453
>gi|290994068|ref|XP_002679654.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284093272|gb|EFC46910.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 338
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVL---RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ L+NL+ LD+ + D ++ +S L KL +L++ +++ +G L +L
Sbjct: 86 IEKLKNLTYLDISENYIFDKLVNWGKSFGKLDKLTHLNISKNRIERKGIKYLTRMKQLRI 145
Query: 217 L-----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
L N+ + G+ + N++ L LN+S FI E+
Sbjct: 146 LDISCNNIDYCGLFLICNMNQLTNLNISR------------------------NFIKEKS 181
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
+L ++ + L+ L V + +++ FL+ L +LD+S ++IG++ ++ V + +L L
Sbjct: 182 IYL-VDLNQLTTLIVRQNDITQVSFLSNFTKLTNLDVSQNLIGNEGIKFVGEM-KHLTCL 239
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI--SNTDIKG 389
+T F G + G L L L +S I + + ++S + L + + + D++G
Sbjct: 240 RACSTGFDEEGAKCI-GQLSQLTCLDVSHNSIKNQGVEFISQLSYLTDLTVIHCHIDLEG 298
Query: 390 --FIQQVGAETDLVLSLT 405
FI ++ T L +SL
Sbjct: 299 VEFITKMNQLTRLDISLN 316
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 348 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 407
G L L L++S +I+ I Y++ M L+ +DIS +I L +
Sbjct: 114 GKLDKLTHLNISKNRIERKGIKYLTRMKQLRILDISCNNID------------YCGLFLI 161
Query: 408 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
N+N L LN+ + + + +++ L +L L +R +T VS LS+ +KLTNL +
Sbjct: 162 CNMNQLTNLNISRNFIKEKSIY-LVDLNQLTTLIVRQNDITQVSF--LSNFTKLTNLDVS 218
Query: 468 DAVLTNSGL 476
++ N G+
Sbjct: 219 QNLIGNEGI 227
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 32/240 (13%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
W G L LN++ R+ + LT M L+ LD+S C + G+ + ++
Sbjct: 107 VNWGKSFGKLDKLTHLNISK-NRIERKGIKYLTRMKQLRILDIS-CNNIDYCGLFLICNM 164
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
+ L L +S + I L+ L L+ L + +T + L TKL LD+ +
Sbjct: 165 NQLTNLNISRNFIKEKSIYLVD-LNQLTTLIVRQNDITQVSF--LSNFTKLTNLDVSQNL 221
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKA 254
+ N G + L+ L TG + + +S L CL++S+ +I +
Sbjct: 222 IGNEGIKFVGEMKHLTCLRACSTGFDEEGAKCIGQLSQLTCLDVSHNSIKN--------- 272
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
G FI++ ++L T + +D+ F+T+M L LD+S ++ G
Sbjct: 273 -------QGVEFISQL-SYLTDLTVIHCHIDLEGVE-----FITKMNQLTRLDISLNLFG 319
>gi|104647001|gb|ABF74124.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 231
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 232 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 343
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 344 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 395
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 396 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 447
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 448 TDV 450
T++
Sbjct: 390 TEI 392
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLP-DTLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|125534802|gb|EAY81350.1| hypothetical protein OsI_36522 [Oryza sativa Indica Group]
Length = 699
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 171/400 (42%), Gaps = 68/400 (17%)
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
TG + SL+NL ++ G+P+T +V L LTKL+YLDL +RG +
Sbjct: 130 TGPAGRFPGFIGSLRNLIYVNFSGMPLTGMVPPQLGNLTKLQYLDL------SRGNGI-G 182
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG----NENKAPLAKISLAGTT 265
M+ ++ W +T LP SL L+LSN + I + N N A L + L+
Sbjct: 183 MYST----DIQW--LTHLP---SLRYLDLSNVNLSRISDWPRVMNMN-ADLRALYLSSCA 232
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMVA 322
+ ++F ++ + L LD+S++ ++ C+ + +L +LDL +++ + +
Sbjct: 233 LTSASQSFSHLNFTRLEKLDLSDNDFNQPLASCWFWNLTSLTYLDLIMNILPGQFPDSLG 292
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAG----HLPNLEIL---SLSGTQIDDYAISYMS-MM 374
+ A L RFSS G I+ +L NLEIL SLS I + S M +
Sbjct: 293 DMKA------LQVFRFSSNGHSIIMPNLLRNLCNLEILDLGSLSSCNITELLDSLMHCLT 346
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
++ + + + +I G + T + L+ L+L Q++ + + +S
Sbjct: 347 KRIRKLYLWDNNITGTLP------------TGVGKFTSLDTLDLSHNQLTGSVPYEISML 394
Query: 435 KEL--IHLSLRN--ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L I LSL N +T+ L L SL K +LS + G ++PP L
Sbjct: 395 TSLAKIDLSLNNLTGEITEKHLAGLKSL-KTIDLSSNQYLKIVVG-PEWQPPFRL----- 447
Query: 491 HGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 530
E A C++ P W + V I S G
Sbjct: 448 -------EVARFGSCQLGPMFPSWLQWMVNIKELDIWSTG 480
>gi|104646943|gb|ABF74095.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPPVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEXXXTMXXLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRXXPWSIARLTRLQVLXIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-L 142
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +ST +
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLP-DTLQNLTSLETLEVSGCLNVNE-----FPPVSTSI 232
Query: 143 EKLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWG 197
E L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 233 EVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------ 285
Query: 198 SQVSNRGAAVLKMFP--------RLSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 ------GCSVLESFPLEXXXTMXXLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|229108884|ref|ZP_04238489.1| Internalin [Bacillus cereus Rock1-15]
gi|228674653|gb|EEL29892.1| Internalin [Bacillus cereus Rock1-15]
Length = 766
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|116109812|gb|ABJ74285.1| CG11136-like protein [Drosophila miranda]
gi|116109814|gb|ABJ74286.1| CG11136-like protein [Drosophila miranda]
gi|116109816|gb|ABJ74287.1| CG11136-like protein [Drosophila miranda]
gi|116109818|gb|ABJ74288.1| CG11136-like protein [Drosophila miranda]
gi|116109820|gb|ABJ74289.1| CG11136-like protein [Drosophila miranda]
gi|116109822|gb|ABJ74290.1| CG11136-like protein [Drosophila miranda]
gi|116109824|gb|ABJ74291.1| CG11136-like protein [Drosophila miranda]
gi|116109826|gb|ABJ74292.1| CG11136-like protein [Drosophila miranda]
gi|116109828|gb|ABJ74293.1| CG11136-like protein [Drosophila miranda]
gi|116109830|gb|ABJ74294.1| CG11136-like protein [Drosophila miranda]
gi|116109832|gb|ABJ74295.1| CG11136-like protein [Drosophila miranda]
gi|116109834|gb|ABJ74296.1| CG11136-like protein [Drosophila miranda]
gi|116109836|gb|ABJ74297.1| CG11136-like protein [Drosophila miranda]
gi|116109838|gb|ABJ74298.1| CG11136-like protein [Drosophila miranda]
gi|116109840|gb|ABJ74299.1| CG11136-like protein [Drosophila miranda]
gi|116109842|gb|ABJ74300.1| CG11136-like protein [Drosophila miranda]
gi|116109844|gb|ABJ74301.1| CG11136-like protein [Drosophila miranda]
gi|116109846|gb|ABJ74302.1| CG11136-like protein [Drosophila miranda]
Length = 473
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 269 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 326
+ FL I+ L + N+ LS + L+ + AL LDL+++ I ++ VG
Sbjct: 139 HKSTFLGIKGPLKALGLPGNALLSVPWNALSTLGALNRLDLATNKI--KALGTADFVGLT 196
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS--YMSMMPSLKFIDISN 384
NL L LSN + SS + +L LE+L L G ++ DYA S Y+S SL+ +D++
Sbjct: 197 NLVYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRYLSQCLSLRQLDLTA 255
Query: 385 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 256 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 304
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 501
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 305 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 363
>gi|229160381|ref|ZP_04288379.1| Internalin [Bacillus cereus R309803]
gi|228623105|gb|EEK79933.1| Internalin [Bacillus cereus R309803]
Length = 747
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 43/217 (19%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 339
L L V+N+ + F T +K L+HL L ++ I V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKIKDPSFFTSLKQLKHLALRANEI----VDVTPLIKMDNLDSLDLSNNKIT 294
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 389
+ + + N++ L LSG QI+D ++ ++ M L +++++N I
Sbjct: 295 NVAPLV---EMKNVKSLYLSGNQIED--VTALAKMEQLDYLNLANNKITNVAPLSALKNV 349
Query: 390 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 430
++ G + DLVL+ L+ + +N L +L++ + Q+ D T
Sbjct: 350 TYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGIDQMNQLSKLSIGKNQIEDVT--S 407
Query: 431 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 467
L+ +L L L N L D++ LSSL L L +
Sbjct: 408 LAKMTQLTELDLPNNELKDIT--PLSSLVNLQKLDLE 442
>gi|290987030|ref|XP_002676226.1| predicted protein [Naegleria gruberi]
gi|284089827|gb|EFC43482.1| predicted protein [Naegleria gruberi]
Length = 298
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 122/286 (42%), Gaps = 45/286 (15%)
Query: 83 MAYLGAFRYLRSLNVAD-CRRVTSSALWALTGM---TCLKELDLSRCVK----------- 127
+ Y+ + LR LN+ D C T L +++ M TCLK DL C +
Sbjct: 17 LKYISELKNLRILNIHDPCFTFTRYGLESISEMPKLTCLKVRDLKICNEGVNWISQSTQL 76
Query: 128 --------VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 179
D G++ L + L LWL A+ + L+ L L+ L++ + D
Sbjct: 77 TDLDFTTCTLDQGLESLCEMKRLTSLWLPSCPKYANKVELIGQLTQLTSLNICARGINDQ 136
Query: 180 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 239
++ LT+L LD+ +Q+ + L LN+++ + +
Sbjct: 137 DGVHIKELTQLTELDISLNQIVFETIESISQLTNLIILNMSYCNIG-----------DDG 185
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--L 297
C I + + E K I+ AG I++ + + LD+SN+ +S+ +
Sbjct: 186 ACLIGELSQLRELKVLKNLITDAGVISISQLKHLIK--------LDISNNEISKTGAESI 237
Query: 298 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 343
+ ++ L +L++ ++IGD+ + + C + LR+L+ T SS G+
Sbjct: 238 SGLRNLTYLNIGYNLIGDEGCDFI-CDLSLLRSLHADKTGISSEGI 282
>gi|104646931|gb|ABF74089.1| disease resistance protein [Arabidopsis thaliana]
gi|104646933|gb|ABF74090.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCXRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|290974552|ref|XP_002670009.1| predicted protein [Naegleria gruberi]
gi|284083563|gb|EFC37265.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 145/334 (43%), Gaps = 55/334 (16%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E + Y+ + L LNV++ + + + M L L++ + + D G K
Sbjct: 97 NNIGNEGVKYISGMKQLTHLNVSE-NNIGLDGVKYIVEMKQLTHLNIGQN-SIGDEGAKL 154
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ ++ L L + G++++GI +S L L+ L++ + D + + + +L YL +
Sbjct: 155 IGEMTQLLDLCIFYCGISSEGIKHISKLDKLTDLNISSNMLYDDSTKYISGMNQLTYLRI 214
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
+ + + GA L +L+ +N+ W NE
Sbjct: 215 HDNNIGDEGAKFLGKMKQLTGINI-WR---------------------------NE---- 242
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMI 313
++ G F+ + L+ +D+S++++ ++++MK L +LD+S + I
Sbjct: 243 ---LTAEGVKFLTGLDK--------LTEIDISSNNIGDNGAKYISEMKQLTNLDVSDNNI 291
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
G++ + + + L L L G ++ L L L +S ID+ Y+S
Sbjct: 292 GEEGAKYIGNM-KQLTILTLWKNNIRGEGAKYIS-KLEKLTELDISENHIDEKGAKYISE 349
Query: 374 MPSLKFIDISNTDIKG-----FIQQVGAETDLVL 402
M L +DIS +I G +I+++ TDL++
Sbjct: 350 MSQLNALDIS-VNIIGNQGAKYIKEMKQLTDLLI 382
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 142/346 (41%), Gaps = 47/346 (13%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-- 217
L L+ L+ LD+ G + + + + + L L++ G+ + N G + +L+ L
Sbjct: 59 LGLLKQLTQLDIDGNNIDEEGAKYISEMQYLAILNMLGNNIGNEGVKYISGMKQLTHLNV 118
Query: 218 ---NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK-------------ISL 261
N+ GV + + L LN+ +I G+E + + IS
Sbjct: 119 SENNIGLDGVKYIVEMKQLTHLNIGQNSI-----GDEGAKLIGEMTQLLDLCIFYCGISS 173
Query: 262 AGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVE 319
G I++ + L+ L++S++ L +++ M L +L + + IGD+ +
Sbjct: 174 EGIKHISKLDK--------LTDLNISSNMLYDDSTKYISGMNQLTYLRIHDNNIGDEGAK 225
Query: 320 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 379
+ + L +N+ ++ GV L G L L + +S I D Y+S M L
Sbjct: 226 FLGKM-KQLTGINIWRNELTAEGVKFLTG-LDKLTEIDISSNNIGDNGAKYISEMKQLTN 283
Query: 380 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 439
+D+S+ +I + GA+ + N+ L L L + + +S ++L
Sbjct: 284 LDVSDNNIG----EEGAK--------YIGNMKQLTILTLWKNNIRGEGAKYISKLEKLTE 331
Query: 440 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 485
L + + + +S +S+L L I ++ N G K + L
Sbjct: 332 LDISENHIDEKGAKYISEMSQLNALDISVNIIGNQGAKYIKEMKQL 377
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 133/320 (41%), Gaps = 29/320 (9%)
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECL 236
+ L +L +L LD+ G+ + GA + L+ LN+ GV + + L L
Sbjct: 57 KKLGLLKQLTQLDIDGNNIDEEGAKYISEMQYLAILNMLGNNIGNEGVKYISGMKQLTHL 116
Query: 237 NLS--NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS----FLDVSNSS 290
N+S N +D + E K L +++ + +E + T LL + +S+
Sbjct: 117 NVSENNIGLDGVKYIVEMK-QLTHLNIGQNSIGDEGAKLIGEMTQLLDLCIFYCGISSEG 175
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 350
+ ++++ L L++SS+M+ DDS + ++ + L L + + G L G +
Sbjct: 176 IKH---ISKLDKLTDLNISSNMLYDDSTKYISGMNQ-LTYLRIHDNNIGDEGAKFL-GKM 230
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
L +++ ++ + +++ + L IDIS+ +I GA+ + +
Sbjct: 231 KQLTGINIWRNELTAEGVKFLTGLDKLTEIDISSNNIG----DNGAK--------YISEM 278
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L L++ + + + K+L L+L ++ +S L KLT L I +
Sbjct: 279 KQLTNLDVSDNNIGEEGAKYIGNMKQLTILTLWKNNIRGEGAKYISKLEKLTELDISENH 338
Query: 471 LTNSGLGSFKPPRSLKLLDL 490
+ G L LD+
Sbjct: 339 IDEKGAKYISEMSQLNALDI 358
>gi|348553839|ref|XP_003462733.1| PREDICTED: CD180 antigen-like [Cavia porcellus]
Length = 672
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 28/249 (11%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL 147
F +L+ L++ C + + GMT LK+L LS K T + S +L L++
Sbjct: 307 CFTHLQELDLTACHLKELPS--GIKGMTSLKKLILS-VNKFTQLCQINAASFPSLTHLYI 363
Query: 148 -SETGLTADGIALLSSLQNLSVLDL--GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
T G L L+NL LDL G+ +D L+ L +L+ L+L +Q
Sbjct: 364 KGNTNKLELGAGCLEKLENLQKLDLSHNGIDASDCCNLQLKTLPQLQSLNLSYNQPLGLQ 423
Query: 205 AAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSNCTIDS----ILEGNENKA 254
K+ PRL L+LA+T + + N+ L+ LNLS+C +D+ +L G N
Sbjct: 424 NEAFKVCPRLELLDLAFTRLHVIAEQSPFQNLDLLQVLNLSHCLLDASNEHLLAGLPN-- 481
Query: 255 PLAKISLAGTTF-------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE--H 305
L ++L G F IN + +E +LS D+S+ F L M ++ H
Sbjct: 482 -LRHLNLQGNHFKDGNIPKINLFQMVGSLEILVLSSCDLSSIDPEAFHSLGNMTYIDLSH 540
Query: 306 LDLSSSMIG 314
+L+SS I
Sbjct: 541 NNLTSSSIN 549
>gi|104646949|gb|ABF74098.1| disease resistance protein [Arabidopsis thaliana]
Length = 585
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+++ + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKNIPIGITLKSLETVGMS----GCSSLKHFPEISYNTRRLFLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F +E L +S + I +++ C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTNIEVLRISETSI--EAIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPE 319
Query: 393 QVG---AETDLVLSLTALQN-------LNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G A L S TA++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLAIGNSFYTSEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-L 142
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +ST +
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLP-DTLQNLTSLETLEVSGCLNVNE-----FPRVSTNI 232
Query: 143 EKLWLSETGLTA--DGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWG 197
E L +SET + A I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 233 EVLRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------ 285
Query: 198 SQVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 ------GCSVLESFPPEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAI 337
>gi|426371210|ref|XP_004052544.1| PREDICTED: F-box/LRR-repeat protein 14 [Gorilla gorilla gorilla]
Length = 307
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 37/300 (12%)
Query: 92 LRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSE 149
LR+LN++ C+++T S+L + + L+ L+L C +T+ G+ + + L+ L L
Sbjct: 25 LRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRS 84
Query: 150 TGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+D GI L+ + + G L + L L+ Q LT L + +RG L
Sbjct: 85 CRHLSDVGIGHLAGMTRSAA--EGCLGLEQLTLQDCQKLTDLSLKHI------SRGLTGL 136
Query: 209 KMFPRLSFL-NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
++ LSF ++ G+ L ++ SL LNL +C D+I + + + L+G
Sbjct: 137 RLLN-LSFCGGISDAGLLHLSHMGSLRSLNLRSC--DNISDTGIMHLAMGSLRLSGLD-- 191
Query: 268 NEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVG 325
+SF D V + SL+ ++ Q + L+ L L S I DD + +
Sbjct: 192 -------------VSFCDKVGDQSLA---YIAQGLDGLKSLSLCSCHISDDGINRMVRQM 235
Query: 326 ANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
LR LN+ R + G+ ++A HL L + L G T+I + ++ +P LK +++
Sbjct: 236 HGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLG 295
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 26/228 (11%)
Query: 68 EAIELRGENSVDAEWMAYLG-AFRYLRSLNVADCRRVTSSALWALTGMT------CL--K 118
E +EL G +++ + + + L+SLN+ CR ++ + L GMT CL +
Sbjct: 52 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 111
Query: 119 ELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDL----- 171
+L L C K+TD +KH+ ++ L L LS G +D G+ LS + +L L+L
Sbjct: 112 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 171
Query: 172 -GGLPVTDLVLRSLQVLTKLE--YLDLWGSQVSNRGAAVLKMFPRLSF--LNLAWTGVTK 226
+ L + SL+ L+ L+ + D G Q A L LS +++ G+ +
Sbjct: 172 ISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 230
Query: 227 L-PNISSLECLNLSNCT--IDSILE-GNENKAPLAKISLAGTTFINER 270
+ + L LN+ C D LE E+ + L I L G T I +R
Sbjct: 231 MVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKR 278
>gi|414076287|ref|YP_006995605.1| hypothetical protein ANA_C11003 [Anabaena sp. 90]
gi|413969703|gb|AFW93792.1| leucine-rich repeat-containing protein [Anabaena sp. 90]
Length = 474
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 166/366 (45%), Gaps = 32/366 (8%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
L+ +T L L LS+ K++D +K L +++ L L LS+ ++ I LS+L L+ L
Sbjct: 102 PLSNLTKLTSLGLSKN-KISD--IKSLSNLTKLTSLGLSKNKIS--DIKSLSNLTKLTKL 156
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---K 226
DL G ++D L LTKL LDLWG+Q+S+ L L+FLNL ++
Sbjct: 157 DLVGNQISDTT--PLSNLTKLTSLDLWGNQISD--IKPLSNLTNLTFLNLVGNKISDIKP 212
Query: 227 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 286
L N++ L L LS I I + N L K+ L G + + L+ LD+
Sbjct: 213 LSNLTKLTSLGLSKNKISDI-KSLSNFTNLTKLDLVGNQI---SDTTPLSNLTKLTSLDL 268
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
+ +S L+ + L L L + I + ++ ++ + NL +L LS + S
Sbjct: 269 WGNQISDIKPLSNLTNLTFLILWGNQISN--IKPLSNL-TNLTSLTLSLNQISDIKP--- 322
Query: 347 AGHLPNLEILSLSGTQIDDYA------ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
+L NL L L G +I D + S K DI + + +
Sbjct: 323 LSNLTNLTYLDLWGNKISDIKPLSNLTNLTYLYLLSNKISDIKPLSNLTNLTLLFLSLNQ 382
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+ + L +L +L L L + Q+SD + PLS L L L ++D+ LS+L+
Sbjct: 383 ISDIKPLSSLTNLTFLILSKNQISD--IKPLSNLTNLTSLGLSENKISDI--KPLSNLTN 438
Query: 461 LTNLSI 466
LT LS+
Sbjct: 439 LTYLSL 444
>gi|423420629|ref|ZP_17397718.1| hypothetical protein IE3_04101 [Bacillus cereus BAG3X2-1]
gi|401101196|gb|EJQ09187.1| hypothetical protein IE3_04101 [Bacillus cereus BAG3X2-1]
Length = 779
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 245 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 297
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 298 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 354
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 355 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 403
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 404 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 452
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 453 PLSNLVNLQKL 463
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 263 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 317
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L G + N++ L LSG QI+D
Sbjct: 318 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 341
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 342 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 386
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 387 KPLYSLPLKDLVLT 400
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 139/295 (47%), Gaps = 40/295 (13%)
Query: 174 LPVTDLVLRSLQVL--TKLEYL-DLWGSQVSNRGAAVLKMFPRLSFLN-LAWTG-----V 224
L V DL L + ++L + L+Y+ +L V+N F L LN LA G V
Sbjct: 239 LQVKDLFLNTNEILDYSALKYMPNLKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDV 298
Query: 225 TKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
T L + +LE L+LSN I ++ L G +N + + L+G I + A +E L
Sbjct: 299 TPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ--LD 352
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
+L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 353 YLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK----- 403
Query: 343 VGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 392
V L+G + L L + QI+D ++ ++ M L +D+ N ++K +Q
Sbjct: 404 VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNLVNLQ 461
Query: 393 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
++ E + + L+ + NLN L L+ ++ D P+ + +++++N +
Sbjct: 462 KLDLEANYISDLSPVSNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 514
>gi|104646973|gb|ABF74110.1| disease resistance protein [Arabidopsis thaliana]
Length = 584
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|242092912|ref|XP_002436946.1| hypothetical protein SORBIDRAFT_10g012050 [Sorghum bicolor]
gi|241915169|gb|EER88313.1| hypothetical protein SORBIDRAFT_10g012050 [Sorghum bicolor]
Length = 968
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 135/317 (42%), Gaps = 60/317 (18%)
Query: 136 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
LLS+ LE L LS G T L SL+NL L+L G+P + V L L+KL+Y
Sbjct: 125 LLSLEHLEYLDLSMNSLEGATGQIPKFLGSLKNLEYLNLSGIPFSGRVPPHLGNLSKLQY 184
Query: 193 LDL-WGSQVSNRGAAVLKMFPRLSFLNLA---------WTGVTKLPNISSLECLNLSNCT 242
LD+ G+ + + L L +LNL W V + I SL L+LS+C
Sbjct: 185 LDISSGADTFSVDMSWLTRLQFLDYLNLKTVNLSTVADWPHVVNM--IPSLMFLDLSDCM 242
Query: 243 IDSILEG--NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLT 298
+ S + N L + L+G F + + + + L +L+++ + L
Sbjct: 243 LASANQSLRQLNHTDLEWLDLSGNYFHHRISSCWFWNLTSLEYLNLAFTGTYGHLPEALG 302
Query: 299 QMKALEHLDLSSSMIGDDSVEMVA------------------------------CVGANL 328
M +L+ +DLSS+ I S+ MV C L
Sbjct: 303 SMISLQFIDLSSNKI---SMPMVNLENLCSLRIIHLESCFSYGNIEELIERLPRCSQNKL 359
Query: 329 RNLNLSNTRFSSAGVGILA---GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
R LNL + + + G+L HL +L +L LS I +++ SL+ +D+S
Sbjct: 360 RELNLQSNQLT----GLLPDFMDHLTSLFVLDLSWNNITGLLPAFLGNFTSLRTLDLSGN 415
Query: 386 DIKGFI-QQVGAETDLV 401
+ G + ++GA T+L
Sbjct: 416 NFTGGLPYEIGALTNLA 432
>gi|147832652|emb|CAN74892.1| hypothetical protein VITISV_002002 [Vitis vinifera]
Length = 300
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 99 DCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
D ++T + L ALT +T L LDL ++TD+G +L + L+ L + GLT G+
Sbjct: 149 DAHQITDAGLAALTSLTGLTHLDLFG-ARITDSGTSYLRNFKNLQSLEICGGGLTDAGVK 207
Query: 159 LLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
+ L L+VL+L +TD L + LT L L + S+++N G LK L L
Sbjct: 208 NIKDLTCLTVLNLSQNCNLTDKSLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSL 267
Query: 218 NLAWTGVTKLPNISSLECLNLSN 240
L VT + +I L+ +L N
Sbjct: 268 TLDSCKVT-VNDIKKLQSKDLPN 289
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++ LE + LS T +T G+ S+L +L L+L +TD L +L LT L +LDL+G+
Sbjct: 116 LANLESINLSFTAVTDSGLRKSSALSSLKSLNLDAHQITDAGLAALTSLTGLTHLDLFGA 175
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLEC---LNLS-NCTI-DSILEGNE 251
++++ G + L+ F L L + G+T + NI L C LNLS NC + D LE
Sbjct: 176 RITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQNCNLTDKSLELIS 235
Query: 252 NKAPLAKISLAGTTFIN 268
L +S++ + N
Sbjct: 236 GLTALVSLSVSNSRITN 252
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
ANL ++NLS T + +G+ + L +L+ L+L QI D ++ ++ + L +D+
Sbjct: 117 ANLESINLSFTAVTDSGLRKSS-ALSSLKSLNLDAHQITDAGLAALTSLTGLTHLDLFGA 175
Query: 386 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RN 444
I TD S L+N +L+ L + ++DA + + L L+L +N
Sbjct: 176 RI----------TDSGTSY--LRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLSQN 223
Query: 445 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 490
+LTD SL +S L+ L +LS+ ++ +TN+GL K ++LK L L
Sbjct: 224 CNLTDKSLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTL 269
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+L ++ L +LE +NL T V+D+ L S L L+L +TD L L+SL+
Sbjct: 107 ILLFVNMEGLANLESINLSFTAVTDSGLRKSSALSSLKSLNLDAHQITDAGLAALTSLTG 166
Query: 461 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 495
LT+L + A +T+SG + ++L+ L++ GG L
Sbjct: 167 LTHLDLFGARITDSGTSYLRNFKNLQSLEICGGGL 201
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
+ G+ L+ ++LS VTD+G++ ++S+L+ L L +T G+A L+SL L+ LD
Sbjct: 113 MEGLANLESINLSF-TAVTDSGLRKSSALSSLKSLNLDAHQITDAGLAALTSLTGLTHLD 171
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
L G +TD L+ L+ L++ G +++ G +K L+ LNL+
Sbjct: 172 LFGARITDSGTSYLRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVLNLS 221
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YL F+ L+SL + +T + + + +TCL L+LS+ +TD ++ + ++ L
Sbjct: 183 SYLRNFKNLQSLEICG-GGLTDAGVKNIKDLTCLTVLNLSQNCNLTDKSLELISGLTALV 241
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
L +S + +T G+ L L+NL L L VT ++ LQ
Sbjct: 242 SLSVSNSRITNAGLQHLKQLKNLKSLTLDSCKVTVNDIKKLQ 283
>gi|52144007|ref|YP_082821.1| internalin [Bacillus cereus E33L]
gi|51977476|gb|AAU19026.1| internalin [Bacillus cereus E33L]
Length = 772
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V ++A + L L
Sbjct: 285 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTVLAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 390
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N LTD++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDIT--PLSKMTQLKELHLPNNELTDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
>gi|104646939|gb|ABF74093.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|22658403|gb|AAH31285.1| FBXL13 protein [Homo sapiens]
gi|123981278|gb|ABM82468.1| F-box and leucine-rich repeat protein 13 [synthetic construct]
gi|123996109|gb|ABM85656.1| F-box and leucine-rich repeat protein 13 [synthetic construct]
Length = 707
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 51/321 (15%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSNCT------IDSIL 247
++ + K +P LS + +A G+T L + L LNL+NC + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFL 473
Query: 248 EGNE-------NKAPLAKISLAGTTFINER-----------------EAFLYIET--SLL 281
+G N + ++S A ++ER + YI SL+
Sbjct: 474 DGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLV 533
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFS 339
S +D+S + +S F LEHLD+S S + D ++ +A NL +L+++ + +
Sbjct: 534 S-IDLSGTDISNEAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKIT 592
Query: 340 SAGVGILAGHLPNLEILSLSG 360
+ + +L+ L IL +SG
Sbjct: 593 DSAMEMLSAKCHYLHILDISG 613
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 66/331 (19%)
Query: 90 RYLRSLNVADCRRVTSSALWALT----GMTC----------------------LKELDLS 123
R L+ LNV+DC T ++ ++ G+ C L+ L L+
Sbjct: 245 RNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLA 304
Query: 124 RCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
C + TD G+++L + KL +L +G T S+Q + + L +
Sbjct: 305 YCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQ------ISVQGFRYIANSCTGIMHLTIN 358
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
+ LT N A+++ R++ +L +TG P+IS LS C
Sbjct: 359 DMPTLT------------DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACK 401
Query: 243 IDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+ I EGN+ +++ A FI++ Y S + D + S L+ +K
Sbjct: 402 LRKIRFEGNK------RVTDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLK 451
Query: 302 ALEHLDLSSSM-IGDDSVEMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILS 357
L L+L++ + IGD ++ +R LNLSN R S A V L+ PNL LS
Sbjct: 452 QLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLS 511
Query: 358 LSGTQ-IDDYAISYMSMMPSLKFIDISNTDI 387
L + + I Y+ + SL ID+S TDI
Sbjct: 512 LRNCEHLTAQGIGYIVNIFSLVSIDLSGTDI 542
>gi|428317664|ref|YP_007115546.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428241344|gb|AFZ07130.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 782
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 178/391 (45%), Gaps = 71/391 (18%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N A+ L+G D +A L A L LN+ + + L ALT +T L L+ ++
Sbjct: 76 NLTALYLQGSQIND---IASLSALTNLTYLNLESNQITDITPLSALTNLTYLN-LNHNQI 131
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
+T L+I +LE +++ I LS+L NL+ L LG +TD+ L
Sbjct: 132 TDITPLSGLTNLTILSLEYNQITD-------ITGLSALTNLTDLCLGCNQITDIT--GLL 182
Query: 186 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNLSNCTI 243
LT L ++VS + + P + NL G+ ++ +IS L L +N T
Sbjct: 183 GLTNL-------TRVSLNNNEITDVTPLSALTNLTKLGIENQEITDISPLSAL--TNLTE 233
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
SI +G + +PL+ ++ FI+E D+S LS LT++
Sbjct: 234 LSISDGIIDISPLSALTNLTELFISE------------GITDIS--PLSALTNLTKL--- 276
Query: 304 EHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
S+I +D++ ++ + A NL +L T+ + + L+ L NL L LS
Sbjct: 277 -------SIIYNDTITEISPLSALTNLTSLYFLYTQITD--ITALSA-LTNLTYLYLSDN 326
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
QI D I+ +S + +L ++++SN I TD+ +L+AL NL +L NL
Sbjct: 327 QITD--ITALSALTNLTYLNLSNNQI----------TDIA-ALSALTNLTYL---NLSNN 370
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSL 452
Q++D T LS L L L +TD++L
Sbjct: 371 QITDIT--ALSALTNLTELHLETNQITDLNL 399
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 158/349 (45%), Gaps = 56/349 (16%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L +++ L L+L G + IA LS+L NL+ L+L +TD+ L LT L YL+L
Sbjct: 71 LSALTNLTALYLQ--GSQINDIASLSALTNLTYLNLESNQITDIT--PLSALTNLTYLNL 126
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE-----CLNLSNCTIDSILEGN 250
+Q+++ L L+ L+L + +T + +S+L CL + T + L G
Sbjct: 127 NHNQITD--ITPLSGLTNLTILSLEYNQITDITGLSALTNLTDLCLGCNQITDITGLLGL 184
Query: 251 ENKAPLAKISLAGT--TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 308
N L ++SL T + A + L+ L + N ++ L+ + L L +
Sbjct: 185 TN---LTRVSLNNNEITDVTPLSAL-----TNLTKLGIENQEITDISPLSALTNLTELSI 236
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSL--SGTQID 364
S +I + + NL L F S G+ ++ L NL LS+ + T +
Sbjct: 237 SDGIIDISPLSALT----NLTEL------FISEGITDISPLSALTNLTKLSIIYNDTITE 286
Query: 365 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 424
+S ++ + SL F+ TDI TAL L +L L L Q++
Sbjct: 287 ISPLSALTNLTSLYFLYTQITDI-----------------TALSALTNLTYLYLSDNQIT 329
Query: 425 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
D T LS L +L+L N +TD++ LS+L+ LT L++ + +T+
Sbjct: 330 DIT--ALSALTNLTYLNLSNNQITDIA--ALSALTNLTYLNLSNNQITD 374
>gi|242004626|ref|XP_002423181.1| F-box/LRR-repeat protein, putative [Pediculus humanus corporis]
gi|212506146|gb|EEB10443.1| F-box/LRR-repeat protein, putative [Pediculus humanus corporis]
Length = 497
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
LRSL+++ C R+T +AL + + L+EL L RC+ +TD G+ ++ ++ +L L+L
Sbjct: 366 LRSLDLSWCPRITDAALECIACDLNQLEELTLDRCIHITDLGIGYISTMLSLSALYLRWC 425
Query: 151 GLTAD-GIALLSSLQNLSVLDLGGLP 175
L D G+ L ++NL +L L G P
Sbjct: 426 TLVKDFGLQHLCGMRNLQILSLAGCP 451
>gi|218185951|gb|EEC68378.1| hypothetical protein OsI_36520 [Oryza sativa Indica Group]
Length = 373
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 18/179 (10%)
Query: 147 LSETGLTA-DG--IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNR 203
LS LT DG ++SL+NL LDL GL T +V L L+KLE+LDL G+ + +
Sbjct: 108 LSNNNLTGPDGRFPVFVASLRNLQYLDLSGLGFTGMVPYQLGNLSKLEFLDLSGTGMQSA 167
Query: 204 GAAVLKMFPRLSFLNLA---------WTGVTKLPNISSLECLNLSNCTIDSILEG--NEN 252
+ L L +L L+ W V I SL L+LS C++ + + N
Sbjct: 168 DISWLTRLQWLKYLYLSSVNLSAISDWAHVVN--KIPSLTVLSLSGCSLTRVDHSLKHVN 225
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQMKALEHLDLS 309
L K+ L+G F + + + L +LD+ ++ L RF +T M +L+ LD S
Sbjct: 226 LTRLEKLHLSGNDFSHPLSSCWFWILKTLIYLDLESTGLYGRFPNAITNMTSLQVLDFS 284
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 33/173 (19%)
Query: 327 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
NL+ L+LS F+ V G+L LE L LSGT + IS+++ + LK++ +S+ +
Sbjct: 129 NLQYLDLSGLGFTGM-VPYQLGNLSKLEFLDLSGTGMQSADISWLTRLQWLKYLYLSSVN 187
Query: 387 IKGF------IQQVGAETDLVLSLTALQNLNH---------LERLNLEQTQVSDATLFPL 431
+ + ++ + T L LS +L ++H LE+L+L S PL
Sbjct: 188 LSAISDWAHVVNKIPSLTVLSLSGCSLTRVDHSLKHVNLTRLEKLHLSGNDFSH----PL 243
Query: 432 ST-----FKELIHLSLRNASL--------TDVSLHQLSSLSKLTNLSIRDAVL 471
S+ K LI+L L + L T+++ Q+ S+ N I + +L
Sbjct: 244 SSCWFWILKTLIYLDLESTGLYGRFPNAITNMTSLQVLDFSRNNNAGILEPIL 296
>gi|195029827|ref|XP_001987773.1| GH22100 [Drosophila grimshawi]
gi|193903773|gb|EDW02640.1| GH22100 [Drosophila grimshawi]
Length = 550
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 57/186 (30%)
Query: 92 LRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL----- 145
L L + DC+R++ AL + G+T LK ++LS CV VTD+G+KHL + LE+L
Sbjct: 360 LEFLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSC 419
Query: 146 ---------WLSETG--------------------------------------LTADG-I 157
+L+E G +T G +
Sbjct: 420 DNISDIGMAYLTEGGSGINCLDVSFCDKISDQALTHIAQGLFRLRSLSLNQCHITDQGML 479
Query: 158 ALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRL 214
+ SL L L++G +TD L++L + L+ L+ +DL+G +Q+S++G ++ P+L
Sbjct: 480 KIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKL 539
Query: 215 SFLNLA 220
LNL
Sbjct: 540 QKLNLG 545
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 137/330 (41%), Gaps = 70/330 (21%)
Query: 92 LRSLNVADCRRVTSSALWAL--TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
L SLN++ C V L + LK LDLS C ++TD +
Sbjct: 248 LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSLGR-------------- 293
Query: 150 TGLTADGIALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDL---WGSQVSNR 203
+ L+NL L+LGG + T L+L + L KL +L+L W +S++
Sbjct: 294 ---------IAQHLKNLETLELGGCCNITNTGLLLIAWG-LKKLRHLNLRSCW--HISDQ 341
Query: 204 GAAVLKMFPRLSF---LNLAWTGVTKLPNIS------------SLECLNLSNC--TIDSI 246
G L F R + L L + G+ +S SL+ +NLS C DS
Sbjct: 342 GIGHLAGFSRETAEGNLQLEFLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSG 401
Query: 247 LEGNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
L+ L +++L I++ A+L S ++ LDVS FC +AL H
Sbjct: 402 LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINCLDVS------FCDKISDQALTH 455
Query: 306 ----------LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLE 354
L L+ I D + +A L NLN+ +R + G+ LA L NL+
Sbjct: 456 IAQGLFRLRSLSLNQCHITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLK 515
Query: 355 ILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
+ L G TQ+ I + +P L+ +++
Sbjct: 516 TIDLYGCTQLSSKGIDIIMKLPKLQKLNLG 545
>gi|444725325|gb|ELW65894.1| Toll-like receptor 13 [Tupaia chinensis]
Length = 950
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 34/353 (9%)
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L+NL++L+L + V S Q L+ LE L L +Q+++ RL L+L+
Sbjct: 109 LENLTLLNLVENKIQS-VNTSFQGLSNLETLLLSHNQITHIHKNAFVPLVRLKRLSLSRN 167
Query: 223 GVTKLPNI-------SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 275
++ N+ LE L+L+N +I S+ + L +SL G + + L
Sbjct: 168 FISNFSNVLEAVQHLPCLEHLDLTNNSIMSLDHSPTSLVSLTYLSLQGNKLMELNFSVLS 227
Query: 276 IETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLN 332
+ L+ LDVS +S +L + L+ L+LS + +EM++ NLR ++
Sbjct: 228 LPN--LTTLDVSRNSHQAIQNVYLETLPQLKSLNLSGVQV---QLEMLSVKHLQNLREID 282
Query: 333 LSNTRFSSAGVGI-----LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
LSN S + + L +L LE L D I +++ L F+D+
Sbjct: 283 LSNGELRSGHLNLSTVCHLLRNLLILETLVFQKNATDAGGIKHLANCTRLLFLDL----- 337
Query: 388 KGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
G +DLV L+ + + L+RL+L + Q+S + S+ + L L L +
Sbjct: 338 -------GQTSDLVDLNDSEFNAMPSLQRLHLNKCQLSFVSNRTWSSLQNLTALDLSHNM 390
Query: 447 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 499
S L L +LS+ +T +FK SLK L+L G W++ D
Sbjct: 391 FNSFPDFAFSPLKCLQSLSLSRNPITELNNMAFKGLNSLKELNLAGCWIVAID 443
>gi|229043169|ref|ZP_04190893.1| Internalin [Bacillus cereus AH676]
gi|228726176|gb|EEL77409.1| Internalin [Bacillus cereus AH676]
Length = 766
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|406835554|ref|ZP_11095148.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 392
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
+ LR L LS+TR ++ +A LP LE+L LS T +DD ++ +S + +LK +++S
Sbjct: 114 SKLRQLRLSSTRVTNEACEKIA-ELPALEVLILSDTVVDDVGVAALSRLSNLKSLELSRC 172
Query: 386 DI--KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
+ GF Q +GA LE L + +T + D +L + K L+ L L
Sbjct: 173 HLTRAGF-QAIGA-------------FPALEYLEIRRTNLDDVSLDLVCNAKTLVSLRLS 218
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
N +TD L L L + L + + GL
Sbjct: 219 NNPITDQGLDALGKLPGIEVLEFNETGIHGWGL 251
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 43/298 (14%)
Query: 98 ADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI 157
AD VTS+A +++ ++ L++L LS +VT+ + + + LE L LS+T + G+
Sbjct: 97 ADFSTVTSAAFASISKLSKLRQLRLSS-TRVTNEACEKIAELPALEVLILSDTVVDDVGV 155
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD----------------------- 194
A LS L NL L+L +T +++ LEYL+
Sbjct: 156 AALSRLSNLKSLELSRCHLTRAGFQAIGAFPALEYLEIRRTNLDDVSLDLVCNAKTLVSL 215
Query: 195 -LWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--------TKLPNISSLECLNLSNCTIDS 245
L + ++++G L P + L TG+ K +L+ L+L C +D
Sbjct: 216 RLSNNPITDQGLDALGKLPGIEVLEFNETGIHGWGLAHAQKRGGGKNLKELSLFKCPLDG 275
Query: 246 I-LEGNENKAPLAKISLAGTTFINEREAFLYIETSL--LSFLDVSNS----SLSRFCFLT 298
+ + N + K+ L +++ E + + + L +L+ S + F L
Sbjct: 276 MGAKAIGNFKSVEKLVLGEIPQLDD-EGLMTMVRGMKNLKYLNCSKTPSLFGTLGFKALL 334
Query: 299 QMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
K LE L + S IGDD+V + + NL+ L + T S+ G+ LA LP+ +I
Sbjct: 335 GSKDLEELHIGECSRIGDDAVPFIKKM-KNLKILRVHGTSISARGMAELALALPDTKI 391
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 33/180 (18%)
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNEN 252
S V++ A + +L L L+ T VT K+ + +LE L LS+ +D +
Sbjct: 100 STVTSAAFASISKLSKLRQLRLSSTRVTNEACEKIAELPALEVLILSDTVVDDV-----G 154
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSS 310
A L+++S L L++S L+R F + ALE+L++
Sbjct: 155 VAALSRLSN-------------------LKSLELSRCHLTRAGFQAIGAFPALEYLEIRR 195
Query: 311 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 370
+ + D S+++V C L +L LSN + G+ L G LP +E+L + T I + +++
Sbjct: 196 TNLDDVSLDLV-CNAKTLVSLRLSNNPITDQGLDAL-GKLPGIEVLEFNETGIHGWGLAH 253
>gi|290977067|ref|XP_002671260.1| predicted protein [Naegleria gruberi]
gi|284084827|gb|EFC38516.1| predicted protein [Naegleria gruberi]
Length = 378
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 172/397 (43%), Gaps = 60/397 (15%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ ++ L A+ + LK+++ R ++ G++ + + L L +S G+ +G +S
Sbjct: 23 IVTNGLKAIAELKQLKKINFHRN-QIGQNGLQTISQFNQLLCLDISCNGIGIEGAKAVSE 81
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L L LD+ + D+ + + + +L L + + ++++GA+ + +L+ LN+++
Sbjct: 82 LNQLKELDITANDIGDIGAKYISQMKELTKLYVRYNDINSQGASSIGELHQLTKLNISYN 141
Query: 223 --GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 280
G + IS ++ L K+S+
Sbjct: 142 NIGDEGMKVISGMK--------------------HLTKLSVHN----------------- 164
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+ ++V +S F++QMK L +L +S + IG + VE ++ + + L L +S+ + +
Sbjct: 165 -NHINVGSSQ-----FISQMKQLTNLSISENHIGIEGVETISQL-SQLTRLKISSNQIGA 217
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G IL L L LS+ +I+D + + + L T +K Q+G E
Sbjct: 218 RGA-ILISKLDKLTKLSIGSNRINDEGLKSLCRLKHL-------TKLKADFNQIGNE--- 266
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+ ++ L L L++ +S ++ K+L L + + + +S L++
Sbjct: 267 --GVKSIIQLKQLTFLDIGGNNISHKGAQFINQLKQLRTLYISENQIGNKGAKLISELTQ 324
Query: 461 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 497
L L IR L++ G+ S + L LDL + +T
Sbjct: 325 LRILHIRKNELSDEGVKSILLMKQLTELDLRENYDIT 361
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 21/247 (8%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
++++ L+ LD++++ IGD + ++ + L L + +S G + G L L L
Sbjct: 79 VSELNQLKELDITANDIGDIGAKYISQM-KELTKLYVRYNDINSQGASSI-GELHQLTKL 136
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLS--------L 404
++S I D + +S M L + + N I FI Q+ T+L +S +
Sbjct: 137 NISYNNIGDEGMKVISGMKHLTKLSVHNNHINVGSSQFISQMKQLTNLSISENHIGIEGV 196
Query: 405 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
+ L+ L RL + Q+ +S +L LS+ + + D L L L LT L
Sbjct: 197 ETISQLSQLTRLKISSNQIGARGAILISKLDKLTKLSIGSNRINDEGLKSLCRLKHLTKL 256
Query: 465 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSD 524
+ N G+ S + L LD+ G + + A QF ++ + +
Sbjct: 257 KADFNQIGNEGVKSIIQLKQLTFLDIGGNNISHKGA--QFINQLKQLRTLY-----ISEN 309
Query: 525 QIGSNGP 531
QIG+ G
Sbjct: 310 QIGNKGA 316
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N++ E M + ++L L+V + S+ + ++ M L L +S + G++
Sbjct: 141 NNIGDEGMKVISGMKHLTKLSVHNNHINVGSSQF-ISQMKQLTNLSISEN-HIGIEGVET 198
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ +S L +L +S + A G L+S L L+ L +G + D L+SL L L L
Sbjct: 199 ISQLSQLTRLKISSNQIGARGAILISKLDKLTKLSIGSNRINDEGLKSLCRLKHLTKLKA 258
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+Q+ N G + +L+FL++ ++
Sbjct: 259 DFNQIGNEGVKSIIQLKQLTFLDIGGNNIS 288
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 150/377 (39%), Gaps = 74/377 (19%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L +L T EL + VT+ G+K + + L+K+ + +G+ +S L
Sbjct: 4 LQSLDFSTTTNELSYNHNYIVTN-GLKAIAELKQLKKINFHRNQIGQNGLQTISQFNQLL 62
Query: 168 VLDL--GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--- 222
LD+ G+ + +++ L +L+ LD+ + + + GA + L+ L + +
Sbjct: 63 CLDISCNGIGIEGA--KAVSELNQLKELDITANDIGDIGAKYISQMKELTKLYVRYNDIN 120
Query: 223 --GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 280
G + + + L LN+S I G+E ++ +
Sbjct: 121 SQGASSIGELHQLTKLNISYNNI-----GDEGMKVISGMKH------------------- 156
Query: 281 LSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
L+ L V N+ ++ F++QMK L +L +S + IG + VE ++ + + L L +S+ +
Sbjct: 157 LTKLSVHNNHINVGSSQFISQMKQLTNLSISENHIGIEGVETISQL-SQLTRLKISSNQI 215
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
+ G IL L L LS+ +I+D
Sbjct: 216 GARGA-ILISKLDKLTKLSIGSNRINDEG------------------------------- 243
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
L +L L HL +L + Q+ + + + K+L L + +++ ++ L
Sbjct: 244 -----LKSLCRLKHLTKLKADFNQIGNEGVKSIIQLKQLTFLDIGGNNISHKGAQFINQL 298
Query: 459 SKLTNLSIRDAVLTNSG 475
+L L I + + N G
Sbjct: 299 KQLRTLYISENQIGNKG 315
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG----HLPN 352
+ ++K L+ ++ + IG + ++ ++ L S G+GI L
Sbjct: 31 IAELKQLKKINFHRNQIGQNGLQTISQFNQ------LLCLDISCNGIGIEGAKAVSELNQ 84
Query: 353 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 412
L+ L ++ I D Y+S M L + + DI GA +++ L+
Sbjct: 85 LKELDITANDIGDIGAKYISQMKELTKLYVRYNDINS----QGA--------SSIGELHQ 132
Query: 413 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
L +LN+ + D + +S K L LS+ N + S +S + +LTNLSI + +
Sbjct: 133 LTKLNISYNNIGDEGMKVISGMKHLTKLSVHNNHINVGSSQFISQMKQLTNLSISENHIG 192
Query: 473 NSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 502
G+ + L L + + AIL
Sbjct: 193 IEGVETISQLSQLTRLKISSNQIGARGAIL 222
>gi|119603709|gb|EAW83303.1| F-box and leucine-rich repeat protein 13, isoform CRA_f [Homo
sapiens]
Length = 707
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 51/321 (15%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSNCT------IDSIL 247
++ + K +P LS + +A G+T L + L LNL+NC + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFL 473
Query: 248 EGNE-------NKAPLAKISLAGTTFINER-----------------EAFLYIET--SLL 281
+G N + ++S A ++ER + YI SL+
Sbjct: 474 DGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLV 533
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFS 339
S +D+S + +S F LEHLD+S S + D ++ +A NL +L+++ + +
Sbjct: 534 S-IDLSGTDISNEAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKIT 592
Query: 340 SAGVGILAGHLPNLEILSLSG 360
+ + +L+ L IL +SG
Sbjct: 593 DSAMEMLSAKCHYLHILDISG 613
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 66/331 (19%)
Query: 90 RYLRSLNVADCRRVTSSALWALT----GMTC----------------------LKELDLS 123
R L+ LNV+DC T ++ ++ G+ C L+ L L+
Sbjct: 245 RNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLA 304
Query: 124 RCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
C + TD G+++L + KL +L +G T S+Q + + L +
Sbjct: 305 YCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQ------ISVQGFRYIANSCTGIMHLTIN 358
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
+ LT N A+++ R++ +L +TG P+IS LS C
Sbjct: 359 DMPTLT------------DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACK 401
Query: 243 IDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+ I EGN+ +++ A FI++ Y S + D + S L+ +K
Sbjct: 402 LRKIRFEGNK------RVTDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLK 451
Query: 302 ALEHLDLSSSM-IGDDSVEMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILS 357
L L+L++ + IGD ++ +R LNLSN R S A V L+ PNL LS
Sbjct: 452 QLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLS 511
Query: 358 LSGTQ-IDDYAISYMSMMPSLKFIDISNTDI 387
L + + I Y+ + SL ID+S TDI
Sbjct: 512 LRNCEHLTAQGIGYIVNIFSLVSIDLSGTDI 542
>gi|290979617|ref|XP_002672530.1| predicted protein [Naegleria gruberi]
gi|284086107|gb|EFC39786.1| predicted protein [Naegleria gruberi]
Length = 401
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 267 INEREAFLYIETSLLSFL-DVSNSSLSRFCF-------LTQMKALEHLDLSSSMIGDDSV 318
+N R + + L + + D+S ++S F + Q+K L +LD+S ++IGD+ V
Sbjct: 90 VNRRNRIIAFDCQLFNLMKDISTLNVSENTFENGHCKYIGQLKHLTNLDISINLIGDEGV 149
Query: 319 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 378
+ + L NLN+SN G + G + L L+++ I + ++ + L+
Sbjct: 150 GYLRKL-KQLTNLNISNNMIGEKGAQYI-GKMKQLTCLNINSNHIGSEGVKFLKELKELR 207
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
+D+ + +I +VGA+ L+ ++ L HL+ +E ++ + L KEL
Sbjct: 208 TLDM----VYCYIGEVGAKY-----LSEMKQLTHLD---VECNNINGGAKY-LGELKELT 254
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
+L+ + L D + LS L LT+L++ + ++ G
Sbjct: 255 YLNAKYNILGD-DVRYLSRLELLTDLNVANNGISAKG 290
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 116/254 (45%), Gaps = 33/254 (12%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
EN+ + Y+G ++L +L+++ + + L + L L++S + + + G +
Sbjct: 117 ENTFENGHCKYIGQLKHLTNLDIS-INLIGDEGVGYLRKLKQLTNLNISNNM-IGEKGAQ 174
Query: 135 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
++ + L L ++ + ++G+ L L+ L LD+ + ++ + L + +L +LD
Sbjct: 175 YIGKMKQLTCLNINSNHIGSEGVKFLKELKELRTLDMVYCYIGEVGAKYLSEMKQLTHLD 234
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTIDSILEGN 250
+ + + N GA L L++LN + V L + L LN++N
Sbjct: 235 VECNNI-NGGAKYLGELKELTYLNAKYNILGDDVRYLSRLELLTDLNVAN---------- 283
Query: 251 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDL 308
IS G FI+ E + L L++ ++++ + F++QMK L LD+
Sbjct: 284 ------NGISAKGAKFIS--------EMNRLVNLNIGHNNIGKEGAKFISQMKKLTCLDI 329
Query: 309 SSSMIGDDSVEMVA 322
S + I D+ + ++
Sbjct: 330 SCNSIQDEGAKCIS 343
>gi|423643526|ref|ZP_17619144.1| hypothetical protein IK9_03471 [Bacillus cereus VD166]
gi|401274106|gb|EJR80084.1| hypothetical protein IK9_03471 [Bacillus cereus VD166]
Length = 760
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTRLKQLHLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|428315480|ref|YP_007113362.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428239160|gb|AFZ04946.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 471
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 159/361 (44%), Gaps = 35/361 (9%)
Query: 165 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
NL++L L ++D+ L+ LT L L +W +QVSN LK LS L+L+ +
Sbjct: 137 NLTILQLDRNRISDIT--PLKFLTNLTELSIWYNQVSN--IYPLKNLTNLSVLDLSLNPL 192
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENK--APLAKISLAGTTFINEREAFLYIETSLLS 282
+ + +L LN + + N K L +SL GT I++ Y+ L+
Sbjct: 193 KDIKILENLRNLNTLGLVDNQVSNINHLKYLTSLTHLSL-GTNQISDISPLKYLNQ--LT 249
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
L +S + +S L + L L L+++ + D + NL L L+ R S
Sbjct: 250 ELGISRNQISDISPLKHLSKLTELFLNNNKVSDITPLQFL---TNLNTLWLNRNRVSDIS 306
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-------IQQVG 395
L L NL L L QI Y IS + + +LK +D++N I + +
Sbjct: 307 TLKL---LANLNTLYLINNQI--YDISPLRYLTNLKQVDLTNNKIFDLRMLDSINLTSLY 361
Query: 396 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 455
+ + +++L+ + L+ L+L ++SD + PL + +L L L ++DVS L
Sbjct: 362 LTNNQIEDVSSLKFMKTLKVLSLADNKISDIS--PLKSLTKLTELYLSENQISDVS--PL 417
Query: 456 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 515
SL KLT L + + + S + KP +L L L G L + C + P +
Sbjct: 418 KSLIKLTRLDLANNRI--SDISMLKPLTNLLELYLEGNPLTNRN-----CPLVPDFRCRY 470
Query: 516 E 516
E
Sbjct: 471 E 471
>gi|104646971|gb|ABF74109.1| disease resistance protein [Arabidopsis thaliana]
Length = 584
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+++ + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKNIPIGITLKSLETVGMS----GCSSLKHFPEISYNTRRLFLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F +E L +S + I +++ C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTNIEVLRISETSI--EAIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPE 319
Query: 393 QVG---AETDLVLSLTALQN-------LNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G A L S TA++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLAIGNSFYTSEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-L 142
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +ST +
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLP-DTLQNLTSLETLEVSGCLNVNE-----FPRVSTNI 232
Query: 143 EKLWLSETGLTA--DGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWG 197
E L +SET + A I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 233 EVLRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------ 285
Query: 198 SQVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 ------GCSVLESFPPEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAI 337
>gi|290994522|ref|XP_002679881.1| leucine rich repeat protein [Naegleria gruberi]
gi|284093499|gb|EFC47137.1| leucine rich repeat protein [Naegleria gruberi]
Length = 340
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 33/235 (14%)
Query: 159 LLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
++ ++ L+ LD+ + D + + L +L +L++ + + GA L +L+ L
Sbjct: 94 IIGKMKQLTFLDIRNCSMIDDKGAKYVSALNQLTFLNISQNNIGPEGAKYLSKLDQLTNL 153
Query: 218 NL-----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 272
+ G + ++ L LN+SN I G E +++IS
Sbjct: 154 KINSNEIGPEGAKSISDMKQLTTLNISNNMI-----GMEGAKSISEIS------------ 196
Query: 273 FLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
S L+ LD+S++ +S F+++M L LD + + IGD + ++ + NLR
Sbjct: 197 ------SQLTILDISSNQISNEGLKFISEMSQLTSLDTNGNNIGDKGAKYLSEL-KNLRV 249
Query: 331 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 385
L++S G +++ LP L L++S +I + Y+S M L ++ISN
Sbjct: 250 LDISKNFVYDNGADLIS-KLPQLTNLNISFNEIGNQGAIYLSKMEKLTILNISNN 303
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 75 ENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMK 134
+N++ E YL L +L + + + +++ M L L++S + + G K
Sbjct: 133 QNNIGPEGAKYLSKLDQLTNLKI-NSNEIGPEGAKSISDMKQLTTLNISNNM-IGMEGAK 190
Query: 135 HLLSIST-LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ IS+ L L +S ++ +G+ +S + L+ LD G + D + L L L L
Sbjct: 191 SISEISSQLTILDISSNQISNEGLKFISEMSQLTSLDTNGNNIGDKGAKYLSELKNLRVL 250
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI 243
D+ + V + GA ++ P+L+ LN+++ G L + L LN+SN I
Sbjct: 251 DISKNFVYDNGADLISKLPQLTNLNISFNEIGNQGAIYLSKMEKLTILNISNNLI 305
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 47/287 (16%)
Query: 100 CRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA 158
R + + G M L LD+ C + D G K++ +++ L L +S+ + +G
Sbjct: 83 VERKPGEMFYQIIGKMKQLTFLDIRNCSMIDDKGAKYVSALNQLTFLNISQNNIGPEGAK 142
Query: 159 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 218
LS L L+ L + + +S+ + +L L++ + + GA K +S
Sbjct: 143 YLSKLDQLTNLKINSNEIGPEGAKSISDMKQLTTLNISNNMIGMEGA---KSISEIS--- 196
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
S L L++S+ +IS G FI+ E
Sbjct: 197 ------------SQLTILDISS----------------NQISNEGLKFIS--------EM 220
Query: 279 SLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
S L+ LD + +++ +L+++K L LD+S + + D+ ++++ + L NLN+S
Sbjct: 221 SQLTSLDTNGNNIGDKGAKYLSELKNLRVLDISKNFVYDNGADLISKL-PQLTNLNISFN 279
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
+ G I + L IL++S I Y+ M L ++I+
Sbjct: 280 EIGNQG-AIYLSKMEKLTILNISNNLIGPAGAKYLGEMQQLTKLNIN 325
>gi|290984863|ref|XP_002675146.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284088740|gb|EFC42402.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 458
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 151/361 (41%), Gaps = 48/361 (13%)
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 216
+ + SL NL++ + + + + L +L L++ +++ N G L+
Sbjct: 121 LEFMGSLNNLTIRS----KIRNEGAKCIPQLKQLTNLNVEDNKIGNEGVKCFSELKHLTN 176
Query: 217 LNLAWT-----GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINER 270
N+ G + +S L C+N+ N I + E L +++ G I ++
Sbjct: 177 FNIRNNKIMDEGAKYISQMSQLTCMNIGNNNIGEPGAEYISQMKQLTNLNIHGNR-IGDK 235
Query: 271 EAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVA------ 322
A E L+ LD+ ++L +L+QMK L +L + + + ++ + V+
Sbjct: 236 GARHISEMEGLTHLDIGYNNLGNLGSQYLSQMKKLTYLFIEGNRLDENGAKFVSELKQLT 295
Query: 323 --CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
C+GAN + + R+ + + L LS+ G +I + ++ M L +
Sbjct: 296 ILCIGAN--GIGPNGARYIT--------EMKQLTDLSIGGAKIGEEGARHLKTMNQLTNL 345
Query: 381 DISNTDIKGF--IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
+I G+ + +GA+ + + L L++ + D +S K L
Sbjct: 346 NI------GYNRLGSIGAK--------FISEMKQLTSLDIFYNNIEDEGAKHISELKNLR 391
Query: 439 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 498
L + ++TD +S L++LT+LSI L++ G L LD+ GG +++
Sbjct: 392 KLDIGRNNITDEGAKYVSQLNQLTHLSITYNNLSDEGAKYINTMTQLTKLDI-GGNAISD 450
Query: 499 D 499
D
Sbjct: 451 D 451
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 128/321 (39%), Gaps = 49/321 (15%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E Y+ L +N+ + + ++ M L L++ ++ D G +H
Sbjct: 182 NKIMDEGAKYISQMSQLTCMNIGN-NNIGEPGAEYISQMKQLTNLNI-HGNRIGDKGARH 239
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+S ++ L+ LD+G + +L + L + KL YL +
Sbjct: 240 ------------------------ISEMEGLTHLDIGYNNLGNLGSQYLSQMKKLTYLFI 275
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
G+++ GA + +L+ L + G+ PN + I E
Sbjct: 276 EGNRLDENGAKFVSELKQLTILCIGANGIG--PNGARY------------ITE----MKQ 317
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMI 313
L +S+ G I E A + L+ L++ + L F+++MK L LD+ + I
Sbjct: 318 LTDLSIGGAK-IGEEGARHLKTMNQLTNLNIGYNRLGSIGAKFISEMKQLTSLDIFYNNI 376
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 373
D+ + ++ + NLR L++ + G ++ L L LS++ + D Y++
Sbjct: 377 EDEGAKHISEL-KNLRKLDIGRNNITDEGAKYVS-QLNQLTHLSITYNNLSDEGAKYINT 434
Query: 374 MPSLKFIDISNTDIKGFIQQV 394
M L +DI I I+ +
Sbjct: 435 MTQLTKLDIGGNAISDDIEMI 455
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G + E +L L +LN+ R+ S ++ M L LD+ + D G
Sbjct: 324 GGAKIGEEGARHLKTMNQLTNLNIG-YNRLGSIGAKFISEMKQLTSLDIFYN-NIEDEGA 381
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
KH+ + L KL + +T +G +S L L+ L + ++D + + +T+L L
Sbjct: 382 KHISELKNLRKLDIGRNNITDEGAKYVSQLNQLTHLSITYNNLSDEGAKYINTMTQLTKL 441
Query: 194 DLWGSQVSN 202
D+ G+ +S+
Sbjct: 442 DIGGNAISD 450
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + Y+ + L L++ + + L M L L++ ++ G
Sbjct: 300 GANGIGPNGARYITEMKQLTDLSIGGAK-IGEEGARHLKTMNQLTNLNIGYN-RLGSIGA 357
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L L + + +G +S L+NL LD+G +TD + + L +L +L
Sbjct: 358 KFISEMKQLTSLDIFYNNIEDEGAKHISELKNLRKLDIGRNNITDEGAKYVSQLNQLTHL 417
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
+ + +S+ GA + +L+ L++ ++
Sbjct: 418 SITYNNLSDEGAKYINTMTQLTKLDIGGNAIS 449
>gi|85679226|gb|ABC72029.1| InlA [Listeria monocytogenes]
Length = 791
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 150
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDSLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 240
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF------- 390
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 391 -IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
+ ++ T+ + +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGTNQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 353 IS--PVSSLTKL 362
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 156 IDSLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 211
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 212 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 266
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 267 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 296
>gi|423392277|ref|ZP_17369503.1| hypothetical protein ICG_04125 [Bacillus cereus BAG1X1-3]
gi|401634924|gb|EJS52686.1| hypothetical protein ICG_04125 [Bacillus cereus BAG1X1-3]
Length = 760
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L G + N++ L LSG QI+D
Sbjct: 299 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 40/295 (13%)
Query: 174 LPVTDLVLRSLQVL--TKLEYL-DLWGSQVSNRGAAVLKMFPRLSFLN-LAWTG-----V 224
L V DL L + ++L + L+Y+ +L V+N F L LN LA G V
Sbjct: 220 LQVKDLFLNTNEILDYSALKYMPNLKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDV 279
Query: 225 TKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
T L + +LE L+LSN I ++ L G +N + + L+G I + A +E L
Sbjct: 280 TPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ--LD 333
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
+L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 334 YLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK----- 384
Query: 343 VGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 392
V L+G + L L + QI+D ++ ++ M L +D+ N ++K +Q
Sbjct: 385 VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNLVNLQ 442
Query: 393 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
++ E + + L+ NLN L L+ ++ D P+ + +++++N +
Sbjct: 443 KLDLEANYISDLSPASNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 495
>gi|104647005|gb|ABF74126.1| disease resistance protein [Arabidopsis thaliana]
Length = 586
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+++ + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKNIPIGITLKSLETVGMS----GCSSLKHFPEISYNTRRLFLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F +E L +S + I +++ C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTNIEVLRISETSI--EAIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPE 319
Query: 393 QVG---AETDLVLSLTALQN-------LNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G A L S TA++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLAIGNSFYTSEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 37/178 (20%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST-L 142
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +ST +
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLP-DTLQNLTSLETLEVSGCLNVNE-----FPRVSTNI 232
Query: 143 EKLWLSETGLTA--DGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWG 197
E L +SET + A I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 233 EVLRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------ 285
Query: 198 SQVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 ------GCSVLESFPPEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAI 337
>gi|224124658|ref|XP_002330078.1| predicted protein [Populus trichocarpa]
gi|222871503|gb|EEF08634.1| predicted protein [Populus trichocarpa]
Length = 1228
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 298 TQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
++++ LE LDL+ + +D +++C + L++L+LS+ + + +G+ +L+ L LE
Sbjct: 121 SKLRKLEVLDLTRNRFNNDK-GILSCFNGLSALKSLDLSDNQLTGSGLKVLSSRLKKLEN 179
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L LS Q +D S ++ SLK +D+S ++ G +V + L LE
Sbjct: 180 LHLSANQCNDSIFSSITGFSSLKSLDLSYNEVTGSGLKVLSSR-----------LKRLEN 228
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 452
L+L Q +D+ L+ F L L+L LT S+
Sbjct: 229 LDLSDNQCNDSIFSSLTGFSSLKSLNLSYNQLTGSSM 265
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 141/349 (40%), Gaps = 48/349 (13%)
Query: 136 LLSISTLEKLWLSETGLTA----DGIALLSS-LQNLSVLDL--GGLPVTDLVLRSLQVLT 188
L L+ L LS GL +G +LSS L+ L VLDL +L L+
Sbjct: 91 FLPFKELQSLDLSYNGLVGCSENEGFEVLSSKLRKLEVLDLTRNRFNNDKGILSCFNGLS 150
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE 248
L+ LDL +Q++ G VL + + KL N+ L+ + C DSI
Sbjct: 151 ALKSLDLSDNQLTGSGLKVLS------------SRLKKLENLH----LSANQCN-DSIFS 193
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHL 306
+ L + L+ L L LD+S++ S F LT +L+ L
Sbjct: 194 SITGFSSLKSLDLSYNEVTGSGLKVLSSRLKRLENLDLSDNQCNDSIFSSLTGFSSLKSL 253
Query: 307 DLS------SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+LS SSM+ + + + L L + +G +L L NLE L L
Sbjct: 254 NLSYNQLTGSSMVSIEKNGYYSFLQYTKWILPLYPSDNFLSGFQVLVSGLRNLEELHLYS 313
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 420
++++ +S +S +LK +D+S G T L+ L +LE L L
Sbjct: 314 NKLNNNILSSLSGFSTLKSLDLSYNKFTG--------------STGLKGLRNLEELYLGF 359
Query: 421 TQVSDATLFPLSTFKELIHLSLRNASLT-DVSLHQLSSLSKLTNLSIRD 468
+ +++ L LS F L L L N T + L L +L L NL D
Sbjct: 360 NKFNNSILSSLSGFSTLKSLDLSNNKFTGSIGLKGLRNLETL-NLEYTD 407
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 152/364 (41%), Gaps = 54/364 (14%)
Query: 101 RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS-ISTLEKLWLSETGLTADGIAL 159
+ S ++TG + LK LDLS +VT +G+K L S + LE L LS+ ++
Sbjct: 185 NQCNDSIFSSITGFSSLKSLDLSY-NEVTGSGLKVLSSRLKRLENLDLSDNQCND---SI 240
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
SSL S L L L S+ + K Y +L ++P +FL+
Sbjct: 241 FSSLTGFSSLKSLNLSYNQLTGSSMVSIEKNGYYSFL-----QYTKWILPLYPSDNFLSG 295
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
V+ L N+ L SN ++IL SL+G S
Sbjct: 296 FQVLVSGLRNLEELHL--YSNKLNNNILS-----------SLSG--------------FS 328
Query: 280 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
L LD+S + + L ++ LE L L + + + ++ + L++L+LSN +F+
Sbjct: 329 TLKSLDLSYNKFTGSTGLKGLRNLEELYLGFNKFNNSILSSLSGF-STLKSLDLSNNKFT 387
Query: 340 SAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
+ +G+ L NLE L+L T + I + +PSLK + S + K F + + +
Sbjct: 388 GS-IGLKG--LRNLETLNLEYTDFKESILIESLGALPSLKTLYASYSKFKHFGKGLSNSS 444
Query: 399 DL--------VLSLTALQNLNHLERLN-LEQTQVSDATLFPLSTF---KELIHLSLRNAS 446
L L + L+N+ HL L L V ++ P + K L HL L +
Sbjct: 445 SLEEVFLYYSYLPASFLRNIGHLSTLKVLSLAGVDFSSTLPAEGWCELKNLEHLFLSRNN 504
Query: 447 LTDV 450
L V
Sbjct: 505 LKGV 508
>gi|392355669|ref|XP_002730306.2| PREDICTED: LOW QUALITY PROTEIN: similar to toll-like receptor 13
[Rattus norvegicus]
Length = 956
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 183/442 (41%), Gaps = 66/442 (14%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCV--KVTDAGMKHLLSISTLEKLWL 147
RY LN+ + + W+ T ++ L +L L + K+ + + L +++ L L
Sbjct: 68 RYTTHLNLTN-NYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLLN---L 123
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
E + + + L NL L L +T + + L KL+YL L +++SN +
Sbjct: 124 VENKIQSVNNSF-EGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGIL 182
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
V LP + L+ +N S +D +P + +SL +F
Sbjct: 183 --------------EAVQHLPCLEHLDLINNSIMYLD--------HSPRSLVSLTHLSF- 219
Query: 268 NEREAFLYIETSLLSFLDVSNSSLSRF-------CFLTQMKALEHLDLSSSMIGDDSVEM 320
E + S LS +++N S S+ +L + L+ L+LS +++ +EM
Sbjct: 220 -EGNNLTELNFSTLSLPNLTNLSASQNGHGVIQDVYLKTLPQLQSLNLSGTVV---KLEM 275
Query: 321 VACVG-ANLRNLNLSNTRFSSAGVGI-----LAGHLPNLEILSLSGTQIDDYAISYMSMM 374
++ N+R ++LSN + + L +LP LEIL + I ++
Sbjct: 276 LSAKHLQNVRVMDLSNRELKHGHLNMKIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKC 335
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLST 433
L F+D+ G +DLV L+ + L L+RLNL + Q+S + S+
Sbjct: 336 TRLLFLDL------------GQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSS 383
Query: 434 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 493
+ L L L + S L +L LS+ +T +F LK L+L
Sbjct: 384 LQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFXLKELNLAAC 443
Query: 494 WLLTED--AILQFCKMHPRIEV 513
W++T D + QF P +EV
Sbjct: 444 WIVTIDRYSFTQF----PNLEV 461
>gi|343470127|emb|CCD17082.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 479
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 165/420 (39%), Gaps = 95/420 (22%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
+++ L A R L L + C +T L L + LK L + CV V G+ L +
Sbjct: 110 DYLHTLSAGRNLVELRLESCNDLTD--LSPLASIKTLKHLFIVDCVSV-KKGIGTLGGLP 166
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDL---GGLPVTDLVLRSLQVLTKLEYLDLWG 197
TL +L+LS T + ++ + L ++L+VL + G L L L + L YL +
Sbjct: 167 TLRELYLSGTSMDSESLCGLCDTRSLAVLTIVSCGALEDISL----LATIRTLHYLTVEV 222
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 257
GA + P L L+L+++ + DS L G L
Sbjct: 223 CTALKTGAGDIGKLPELYELDLSYSSIK------------------DSCLSGLSESHSLR 264
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDD 316
K+ LA S S+LS L M LE+L L+S +GD
Sbjct: 265 KLVLA------------------------SCSNLSDVSSLGTMMTLEYLSLNSCGTVGD- 299
Query: 317 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 376
G G + G+LP L L L+ T + D + + +
Sbjct: 300 -------------------------GAGNI-GNLPKLRELDLASTNVTDATLKGLCVSRC 333
Query: 377 LKFIDISN----TDIKGFIQ-------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
L ++IS TD+ ++ + A +L + L L L +L+ T +++
Sbjct: 334 LSKLNISACSNLTDLSPLVEISTLEELNIRACMELRRGIGDLGKLPALRKLDAACTPITN 393
Query: 426 ATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP-PR 483
+ LS + L+ L L +TDVS L+++S L LSI V G+G+ + PR
Sbjct: 394 DLVQELSVSRSLVILLLDFCVDMTDVS--HLANMSTLEELSINSCVSVTQGVGTLRNLPR 451
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+ S L L+ L++L L+ C ++D + L ++ TLE L L+ G DG + +
Sbjct: 249 IKDSCLSGLSESHSLRKLVLASCSNLSD--VSSLGTMMTLEYLSLNSCGTVGDGAGNIGN 306
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
L L LDL VTD L+ L V L L++ S SN T
Sbjct: 307 LPKLRELDLASTNVTDATLKGLCVSRCLSKLNI--SACSN------------------LT 346
Query: 223 GVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLL 281
++ L IS+LE LN+ C G+ K P L K+ A T N+ L + SL+
Sbjct: 347 DLSPLVEISTLEELNIRACMELRRGIGDLGKLPALRKLDAACTPITNDLVQELSVSRSLV 406
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-----NLRNLNL 333
L ++ L M LE L ++S V + VG LRNLN+
Sbjct: 407 ILLLDFCVDMTDVSHLANMSTLEELSINS------CVSVTQGVGTLRNLPRLRNLNM 457
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 326 ANLRNLNLSNTRFSSA---GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
A +R L+ +A G G + G LP L L LS + I D +S +S SL+ + +
Sbjct: 210 ATIRTLHYLTVEVCTALKTGAGDI-GKLPELYELDLSYSSIKDSCLSGLSESHSLRKLVL 268
Query: 383 SNTDIKGFIQQVGAETDL-VLSLTA----------LQNLNHLERLNLEQTQVSDATLFPL 431
++ + +G L LSL + + NL L L+L T V+DATL L
Sbjct: 269 ASCSNLSDVSSLGTMMTLEYLSLNSCGTVGDGAGNIGNLPKLRELDLASTNVTDATLKGL 328
Query: 432 STFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
+ L L++ S LTD+S L +S L L+IR + G+G +L+ LD
Sbjct: 329 CVSRCLSKLNISACSNLTDLS--PLVEISTLEELNIRACMELRRGIGDLGKLPALRKLD 385
>gi|229022889|ref|ZP_04179409.1| Internalin [Bacillus cereus AH1272]
gi|228738424|gb|EEL88900.1| Internalin [Bacillus cereus AH1272]
Length = 760
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L G + N++ L LSG QI+D
Sbjct: 299 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 139/295 (47%), Gaps = 40/295 (13%)
Query: 174 LPVTDLVLRSLQVL--TKLEYL-DLWGSQVSNRGAAVLKMFPRLSFLN-LAWTG-----V 224
L V DL L + ++L + L+Y+ +L V+N F L LN LA G V
Sbjct: 220 LQVKDLFLNTNEILDYSALKYMPNLKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDV 279
Query: 225 TKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
T L + +LE L+LSN I ++ L G +N + + L+G I + A +E L
Sbjct: 280 TPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ--LD 333
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
+L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 334 YLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK----- 384
Query: 343 VGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 392
V L+G + L L + QI+D ++ ++ M L +D+ N ++K +Q
Sbjct: 385 VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNLVNLQ 442
Query: 393 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
++ E + + L+ + NLN L L+ ++ D P+ + +++++N +
Sbjct: 443 KLDLEANYITDLSPVSNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 495
>gi|223452542|gb|ACM89598.1| leucine-rich repeat protein [Glycine max]
Length = 732
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 154/351 (43%), Gaps = 68/351 (19%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
+L G+ L LDLS V L S+ +L L LS +G L +L NL L
Sbjct: 71 SLLGLKYLNHLDLSSNYFVLTPIPSFLGSLKSLRYLDLSLSGFMGLIPHQLGNLSNLQHL 130
Query: 170 DLG---GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-T 225
+LG L + +L + L+ LEYLDL GS + +G W V +
Sbjct: 131 NLGYNYALQIDNL--NWISRLSSLEYLDLSGSDLHKQG---------------NWLQVLS 173
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 285
LP++S L L +C ID++ + P K T F + L LD
Sbjct: 174 ALPSLSELH---LESCQIDNL------RLPKGK-----TNFTH------------LQVLD 207
Query: 286 VSNSSLSRFC---FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
+SN++L++ K L LDL S+++ ++++ + N++NL+L N + S
Sbjct: 208 LSNNNLNQQIPSWLFNLSKTLVQLDLHSNLLQGKIPQIISSL-QNIKNLDLQNNQLSGPL 266
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ--------- 393
L G L +LE+L LS S + + SL+ +++++ + G I +
Sbjct: 267 PDSL-GQLKHLEVLDLSNNTFTCPIPSPFANLSSLRTLNLAHNRLNGTIPKSFEFLKNLQ 325
Query: 394 ---VGAET---DLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKEL 437
+GA + D+ ++L L NL L+ NL + + ++ L T KEL
Sbjct: 326 VLNLGANSLTGDVPVTLGTLSNLVTLDLSSNLLEGSIKESNFVKLFTLKEL 376
>gi|356529873|ref|XP_003533511.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
TDR-like [Glycine max]
Length = 1187
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 44/281 (15%)
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIET 278
+W +T P S + L+LS+ + + + + L ++L+G F + ++ E
Sbjct: 73 SWRAITCHPKTSQITTLDLSHLNLSGTISPQIRHLSTLNHLNLSGNDFTGSFQYAIF-EL 131
Query: 279 SLLSFLDVSNSSL-SRFC-FLTQMKALEHLD-LSSSMIGDDSVEMVACVGANLRNLNLSN 335
+ L LD+S++S S F ++++K L H + S+S G E+ + LNL
Sbjct: 132 TELRTLDISHNSFNSTFPPGISKLKFLRHFNAYSNSFTGPLPQELTTL--RFIEQLNLGG 189
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGT--------------QIDDYAISY----------M 371
+ FS G+ G P L+ L L+G +++ I Y +
Sbjct: 190 SYFSD-GIPPSYGTFPRLKFLDLAGNAFEGPLPPQLGHLAELEHLEIGYNNFSGTLPSEL 248
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
++P+LK++DIS+T+I G + + L NL LE L L + +++ L
Sbjct: 249 GLLPNLKYLDISSTNISGNV------------IPELGNLTKLETLLLFKNRLTGEIPSTL 296
Query: 432 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 472
K L L L + LT Q++ L++LT L++ + LT
Sbjct: 297 GKLKSLKGLDLSDNELTGPIPTQVTMLTELTMLNLMNNNLT 337
>gi|290998898|ref|XP_002682017.1| predicted protein [Naegleria gruberi]
gi|284095643|gb|EFC49273.1| predicted protein [Naegleria gruberi]
Length = 408
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 130/287 (45%), Gaps = 33/287 (11%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E ++ + L SLN++D + A + ++ MT L LD+S ++ G K + +
Sbjct: 122 EQPKFISEMKQLTSLNISDNQIGLEGAKY-ISEMTQLTSLDIS-VNRIGVEGAKFISEMK 179
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L +S + +G+ +S ++ L+ LD+ + + + +T+L LD+ +++
Sbjct: 180 QLTSLDISVNRIGVEGVKFISEMKQLTSLDISDNQIGLEGSKYISEMTQLTSLDISVNRI 239
Query: 201 SNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA- 257
GA + +L+ LN++ GV + IS ++ L + + + I G + + +
Sbjct: 240 GVEGAKFISEMKQLTSLNISVNRIGVEGVKFISEMKQLTSLDISDNQIGLGAKYISEMTQ 299
Query: 258 ---------KISLAGTTFINERE-----------------AFLYIETSLLSFLDVSNS-S 290
+I G FI+E + F+ T L S + SN
Sbjct: 300 LTSLDISVNRIGDEGAKFISEMKQLTSLDICDNQIGVEGAKFISEMTQLTSLVITSNRIG 359
Query: 291 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 337
+ F+++MK L LD+S + IGD+ V+ ++ + L +LN+S R
Sbjct: 360 VEGAKFISEMKQLTSLDISGNRIGDEGVKFISEM-KQLTSLNISVNR 405
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 22/236 (9%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
++++M L LD+S + IG + + ++ + L +L++S R GV ++ + L
Sbjct: 150 YISEMTQLTSLDISVNRIGVEGAKFISEM-KQLTSLDISVNRIGVEGVKFIS-EMKQLTS 207
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L +S QI Y+S M L +DIS + ++G E +S + L
Sbjct: 208 LDISDNQIGLEGSKYISEMTQLTSLDIS-------VNRIGVEGAKFIS-----EMKQLTS 255
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LN+ ++ + +S K+L L + + + + +S +++LT+L I + + G
Sbjct: 256 LNISVNRIGVEGVKFISEMKQLTSLDISDNQI-GLGAKYISEMTQLTSLDISVNRIGDEG 314
Query: 476 LGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGP 531
+ L LD+ + E A +F E+ S++ S++IG G
Sbjct: 315 AKFISEMKQLTSLDICDNQIGVEGA--KFIS-----EMTQLTSLVITSNRIGVEGA 363
>gi|283778456|ref|YP_003369211.1| hypothetical protein Psta_0665 [Pirellula staleyi DSM 6068]
gi|283436909|gb|ADB15351.1| hypothetical protein Psta_0665 [Pirellula staleyi DSM 6068]
Length = 397
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 97 VADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG 156
+A CR + S +LW ++ D +K + I +++ L + + +T +G
Sbjct: 154 LASCRELVSISLWG---------------PEIEDDHLKAVAGIPSVQHLQVIRSSITDEG 198
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP---- 212
+ + +NL+ L++ +TD L+SL L KL L+L G+ V+++ + F
Sbjct: 199 LQHFAERENLATLEIYVAAITDAGLKSLVNLPKLRKLELLGTSVTDQSMPTIGRFRSLRQ 258
Query: 213 -RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL--AGTTFINE 269
RL +++ G+T L LE L +S C ID G L + L A +T IN+
Sbjct: 259 LRLDAHSISDEGLTFLSRNEKLEVLLVSGCPIDGT--GFAKLCELQNLRLVDASSTNIND 316
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
L+ L++ S ++ K L+HL+ S +
Sbjct: 317 EGLAAIASLPGLTLLEIRQSKVT-------GKGLQHLERSEQL 352
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 43/261 (16%)
Query: 129 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 188
TD + L+ + L + +S+T ++ G+A L+S + L + L G + D L+++ +
Sbjct: 123 TDKCIDELIKVHQLRGVSISKTSISPAGLARLASCRELVSISLWGPEIEDDHLKAVAGIP 182
Query: 189 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE 248
+++L + S +++ G L+ F + N+++LE D+ L+
Sbjct: 183 SVQHLQVIRSSITDEG---LQHF-------------AERENLATLEIY--VAAITDAGLK 224
Query: 249 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 308
N L K+ L GT S D S ++ RF ++L L L
Sbjct: 225 SLVNLPKLRKLELLGT-----------------SVTDQSMPTIGRF------RSLRQLRL 261
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ I D+ + ++ L L +S G L L NL ++ S T I+D +
Sbjct: 262 DAHSISDEGLTFLS-RNEKLEVLLVSGCPIDGTGFAKLC-ELQNLRLVDASSTNINDEGL 319
Query: 369 SYMSMMPSLKFIDISNTDIKG 389
+ ++ +P L ++I + + G
Sbjct: 320 AAIASLPGLTLLEIRQSKVTG 340
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
VT ++ + L++L L ++D G+ L LE L +S + G A L
Sbjct: 242 VTDQSMPTIGRFRSLRQLRLD-AHSISDEGLTFLSRNEKLEVLLVSGCPIDGTGFAKLCE 300
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 222
LQNL ++D + D L ++ L L L++ S+V+ +G L+ +L L ++ T
Sbjct: 301 LQNLRLVDASSTNINDEGLAAIASLPGLTLLEIRQSKVTGKGLQHLERSEQLRSLLISIT 360
Query: 223 GVTKLPNISSLECLNLSNCTIDSI----LEGNENKAPL 256
L + +L+ L NC I + + GN N L
Sbjct: 361 DELTLDDAKALKA-KLPNCQIGWVETDRVTGNVNSGEL 397
>gi|312093229|ref|XP_003147612.1| hypothetical protein LOAG_12050 [Loa loa]
gi|307757223|gb|EFO16457.1| hypothetical protein LOAG_12050 [Loa loa]
Length = 523
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 138/325 (42%), Gaps = 38/325 (11%)
Query: 92 LRSLNVADCR--RVTSSALWALTGMTCLKELDLSR-CVKVTDAGMKHLLSISTLEKLWLS 148
LRSL + D + R+ + +G+ ++EL+L++ + V G + L+ L L+
Sbjct: 179 LRSLEILDLQGNRIQHLPVSIFSGIPTIRELNLAKNSLSVLPTGA--FTYLKNLQILSLA 236
Query: 149 ETGLTADGIALLSSLQNLSVLDLGG--LPVT--DLVLRSLQVLTKLEYLDLWGSQVSNRG 204
+T + LL L+ L L L G +PV +L+ + L +LE L+ G +
Sbjct: 237 HNNITEITVNLLRDLKKLKTLHLDGNRIPVQQFNLLFTDIPQLERLE-LNECGLSIGAVN 295
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLP------NISSLECLNLSNCTIDSILEGNENKAPLAK 258
L F L L LA + K+P +SSL L+LSN + I K + +
Sbjct: 296 DLALNKFHSLRQLGLAGNMLGKVPISVLRNYLSSLNTLDLSNNELVEIESEIFAKTNITR 355
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 318
+ LAG N + A + SL + + + LSR F +H + I ++V
Sbjct: 356 LLLAGNQLGNHQHALSF--NSLKTGIAIRELDLSRNNF-------QHFHAENLGIARNTV 406
Query: 319 EMVACVGANLRNL------NLSNTRFSSAG---VGILAGHLPN----LEILSLSGTQIDD 365
E++ ++ + N++ + G + L LPN L L+LSG Q+
Sbjct: 407 EILHLNENHINGIGQWLTANMTKLKILHLGYNFIEYLPQQLPNEFAQLVFLNLSGNQLTT 466
Query: 366 YAISYMSMMPSLKFIDISNTDIKGF 390
++P L+ IDIS F
Sbjct: 467 LLEHLREILPMLRMIDISENRFTSF 491
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 119/249 (47%), Gaps = 26/249 (10%)
Query: 160 LSSLQNLSVLDL--GGLPVT--DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
L+ L++L +L L G+P DL LRSL++L DL G+++ + ++ P +
Sbjct: 154 LNQLRHLRILRLINCGIPSISRDLKLRSLEIL------DLQGNRIQHLPVSIFSGIPTIR 207
Query: 216 FLNLAWTGVTKLPN-----ISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINE 269
LNLA ++ LP + +L+ L+L++ I I + + L + L G +
Sbjct: 208 ELNLAKNSLSVLPTGAFTYLKNLQILSLAHNNITEITVNLLRDLKKLKTLHLDGNRIPVQ 267
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCF----LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
+ L+ + L L+++ LS L + +L L L+ +M+G + ++
Sbjct: 268 QFNLLFTDIPQLERLELNECGLSIGAVNDLALNKFHSLRQLGLAGNMLGKVPISVLRNYL 327
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD--YAISYMSMMP--SLKFID 381
++L L+LSN I A N+ L L+G Q+ + +A+S+ S+ +++ +D
Sbjct: 328 SSLNTLDLSNNELVEIESEIFAK--TNITRLLLAGNQLGNHQHALSFNSLKTGIAIRELD 385
Query: 382 ISNTDIKGF 390
+S + + F
Sbjct: 386 LSRNNFQHF 394
>gi|260822519|ref|XP_002606649.1| hypothetical protein BRAFLDRAFT_91741 [Branchiostoma floridae]
gi|229291993|gb|EEN62659.1| hypothetical protein BRAFLDRAFT_91741 [Branchiostoma floridae]
Length = 827
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 149/380 (39%), Gaps = 64/380 (16%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
++ L+KLWL LT + + L+NL VL L + D+ + T+LEYL L+ +
Sbjct: 193 LNNLQKLWLDGNTLTDLSSDMFTGLENLQVLTLHDNDINDIQAGTFNSTTQLEYLTLYHN 252
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 258
+++N + + G+ L IS L NE
Sbjct: 253 KLTNLRTDMFR-------------GLGNLQTIS---------------LHNNE------- 277
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDD 316
I++ +A + T L L++ N+ L+ R T + ++HLDL S+ I D
Sbjct: 278 --------ISDIQAGTFTSTPQLGILNLENNKLTSLRSGMFTGLGNVQHLDLRSNEINDI 329
Query: 317 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 376
E L L L+ + + G+ G L NL+ L L +I D +
Sbjct: 330 EAETFIST-PRLEYLFLNGNKLTHLRSGMFTG-LGNLQRLGLQHNEIKDIQARTFNSTLL 387
Query: 377 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
L+ + I NT + + T L+NL H + L+ +++D + +
Sbjct: 388 LEILKIHNTKLTSLRSGM---------FTGLRNLQHFQ---LQHNEINDIQAGTFISTLQ 435
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL- 495
L L + + LT++ L L L ++ + + G+F L+ L L G +
Sbjct: 436 LRDLFMDDNKLTNLRSDMFIGLENLERLQLQRNGIRDIQAGTFISTPRLEFLYLGGNKIA 495
Query: 496 -LTEDAILQFCKMHPRIEVW 514
LT D F + E+W
Sbjct: 496 HLTSD---MFTGLGNLQELW 512
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 302 ALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 360
+L HLDLS + I D + A ++L NL+L S+ + G L NLE LSL
Sbjct: 75 SLTHLDLSRNHI--DKINGQAFYYLSDLINLDLKENSLSNVSADMFTG-LGNLEYLSLYL 131
Query: 361 TQIDDYAISYMSMMPSLKFIDISNTDIK----------GFIQQVGAETDLV--LSLTALQ 408
+I++ + P L+ + + N + G +Q++G + + LS
Sbjct: 132 NEINNIQAGTFNSTPQLRDLYMGNNKLTNLSPDMFTWLGNLQKLGLHDNKLSNLSPNMFY 191
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
LN+L++L L+ ++D + + + L L+L + + D+ +S ++L L++
Sbjct: 192 RLNNLQKLWLDGNTLTDLSSDMFTGLENLQVLTLHDNDINDIQAGTFNSTTQLEYLTLYH 251
Query: 469 AVLTNSGLGSFKPPRSLKLLDLH 491
LTN F+ +L+ + LH
Sbjct: 252 NKLTNLRTDMFRGLGNLQTISLH 274
>gi|15896525|ref|NP_349874.1| ChW repeat-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337738484|ref|YP_004637931.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384459994|ref|YP_005672414.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|15026357|gb|AAK81214.1|AE007824_3 Possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum ATCC 824]
gi|325510683|gb|ADZ22319.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|336293297|gb|AEI34431.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 849
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 107/195 (54%), Gaps = 23/195 (11%)
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
S L+ LD+SN++LS FL+ + L++L+LSS+ I D + ++ + NL L+LS +
Sbjct: 598 SNLTELDLSNTNLSSLAFLSVVTKLQNLNLSSNKIAD--ISALSNL-TNLNQLDLSTNQI 654
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI-SNT--DI---KGF-- 390
S+ +L L IL+L+ +I+D IS ++ + L+ + + SNT DI K F
Sbjct: 655 SNISS---LNNLIGLNILNLNSNKIND--ISSLTNLKQLQTLSLNSNTIQDIDVLKNFTV 709
Query: 391 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
+ +G + + ++ L NLN L+ ++L Q+++ + T + +H L N + D+
Sbjct: 710 LNVLGLSNNKITDISTLANLNSLKNISLSNNQITNISCLCNLTNAQYLH--LENNQINDI 767
Query: 451 SLHQLSSLSKLTNLS 465
S+L+KL NL+
Sbjct: 768 -----SALNKLKNLA 777
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 70/316 (22%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L+ LDL T G+K+L S L +L LS T L++ +A LS + L L+L +
Sbjct: 578 LQRLDLYGNALNTFDGIKNL---SNLTELDLSNTNLSS--LAFLSVVTKLQNLNLSSNKI 632
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
D + +L LT L LDL +Q+SN ++ L N+ L L
Sbjct: 633 AD--ISALSNLTNLNQLDLSTNQISN---------------------ISSLNNLIGLNIL 669
Query: 237 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 296
NL++ I+ I N L +SL T ++ + ++L+ L +SN+ ++
Sbjct: 670 NLNSNKINDI-SSLTNLKQLQTLSLNSNTI---QDIDVLKNFTVLNVLGLSNNKITDIST 725
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
L + +L+++ LS++ I + ++C+ NL+N ++ L
Sbjct: 726 LANLNSLKNISLSNNQITN-----ISCL------CNLTNAQY-----------------L 757
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISN---TDIK--GFIQQVGA---ETDLVLSLTALQ 408
L QI+D IS ++ + +L ++ ++N TDI GF+ ++ + + + +L+
Sbjct: 758 HLENNQIND--ISALNKLKNLAYLYLNNNQITDITALGFLDKLNTLYLSYNKITKVDSLK 815
Query: 409 NLNHLERLNLEQTQVS 424
NL +L+ L L + ++
Sbjct: 816 NLTNLKILILAENNIT 831
>gi|423667107|ref|ZP_17642136.1| hypothetical protein IKO_00804 [Bacillus cereus VDM034]
gi|423676859|ref|ZP_17651798.1| hypothetical protein IKS_04402 [Bacillus cereus VDM062]
gi|401304551|gb|EJS10103.1| hypothetical protein IKO_00804 [Bacillus cereus VDM034]
gi|401307120|gb|EJS12577.1| hypothetical protein IKS_04402 [Bacillus cereus VDM062]
Length = 760
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L +++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKEIT 433
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|158336627|ref|YP_001517801.1| internalin A protein [Acaryochloris marina MBIC11017]
gi|158306868|gb|ABW28485.1| internalin A protein [Acaryochloris marina MBIC11017]
Length = 627
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 175/401 (43%), Gaps = 80/401 (19%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++++ + L SL +A + V S L LT + L R + D + LL++ L
Sbjct: 155 LSFIQDLKQLTSLGLASNKIVDISGLKDLTKLNTLNL----RSNAIDDYSV--LLNLKEL 208
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLG-GLPVTDL-VLRSLQVLTKLEYLDLWGSQV 200
+L +S A +A L L++L+ LDL ++D+ VLR+L KL +LDL +Q+
Sbjct: 209 RQLTVSVR--EATDLAFLQDLKDLTHLDLSYNHWISDISVLRNL---PKLTHLDLGSNQI 263
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
SN AVL +L+ L+L+ ++ + + +L+ L
Sbjct: 264 SN--IAVLLDLQQLTHLSLSSNQISDVSVLQTLQGL------------------------ 297
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
ER LDVS + ++ L ++ L HLD+SS+ + D SV
Sbjct: 298 --------ER-------------LDVSANEIADIAILQNLQGLTHLDISSNEVSDISVLQ 336
Query: 321 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 380
L LN+S+ +L G L L L +S Q+ + IS + + SL +
Sbjct: 337 DLTT---LTQLNVSSNEI--IDYSVLQG-LTQLTSLDVSDNQMSE--ISDLQGLHSLTSL 388
Query: 381 DISNTDIKGF--IQQVGAETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLS 432
++S + +Q + L LS + LQN L LNL TQ++D L L
Sbjct: 389 NLSYNQLSDISVLQDLKQLATLNLSYNPVSDIAVLQNFKDLTTLNLSFTQITD--LSHLQ 446
Query: 433 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
K LI L L + +TD+S L L L L++ D L++
Sbjct: 447 DLKGLISLDLHSNQITDIS--ALQDLEGLYRLNVSDNQLSD 485
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 182/384 (47%), Gaps = 54/384 (14%)
Query: 95 LNVADCRRVTSSA-----LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
LN+ + R++T S L L + L LDLS ++D + L ++ L L L
Sbjct: 203 LNLKELRQLTVSVREATDLAFLQDLKDLTHLDLSYNHWISDISV--LRNLPKLTHLDLGS 260
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ IA+L LQ L+ L L ++D+ + LQ L LE LD+ +++++ A+L+
Sbjct: 261 NQIS--NIAVLLDLQQLTHLSLSSNQISDVSV--LQTLQGLERLDVSANEIAD--IAILQ 314
Query: 210 MFPRLSFLNLAWTGVTK---LPNISSLECLNLS-NCTID-SILEGNENKAPLAKISLAGT 264
L+ L+++ V+ L ++++L LN+S N ID S+L+G L +S
Sbjct: 315 NLQGLTHLDISSNEVSDISVLQDLTTLTQLNVSSNEIIDYSVLQGLTQLTSL-DVSDNQM 373
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
+ I++ + L+ L++S + LS L +K L L+LS + + D +A +
Sbjct: 374 SEISDLQGL-----HSLTSLNLSYNQLSDISVLQDLKQLATLNLSYNPVSD-----IAVL 423
Query: 325 G--ANLRNLNLSNTRFSSAGVGILAGHLPNLE---ILSLSGTQIDDYAISYMSMMPSLKF 379
+L LNLS T+ + HL +L+ L L QI D IS + + L
Sbjct: 424 QNFKDLTTLNLSFTQITDLS------HLQDLKGLISLDLHSNQITD--ISALQDLEGLYR 475
Query: 380 IDISN---TDI------KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 430
+++S+ +DI KG + + +L + ALQ+L L LN+ Q+SD ++
Sbjct: 476 LNVSDNQLSDIAALRKLKGLFS-LNLSINQILDIAALQDLTRLTSLNVSHNQLSDISV-- 532
Query: 431 LSTFKELIHLSLRNASLTDVSLHQ 454
L L L L + D+S+ Q
Sbjct: 533 LQGLTRLNSLDLGANQIADISVLQ 556
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 112/213 (52%), Gaps = 32/213 (15%)
Query: 256 LAKISLAGTTFINEREAFLYIE-TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
L+ I+L+G + A Y++ T+ L+ + + +++S + FL+ +K L HLDLS++ I
Sbjct: 98 LSTIALSG----QDVTAASYLQPTTNLTTVYLKTTNISDYSFLSDLKNLTHLDLSNNQIA 153
Query: 315 DDSVEMVACVGANLRNL-NLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYM 371
D S +++L L++ +S + ++G L L L+L IDDY++ +
Sbjct: 154 DLSF---------IQDLKQLTSLGLASNKIVDISGLKDLTKLNTLNLRSNAIDDYSV--L 202
Query: 372 SMMPSLKFIDIS---NTDIKGFIQQVGAETDLVLS-------LTALQNLNHLERLNLEQT 421
+ L+ + +S TD+ F+Q + T L LS ++ L+NL L L+L
Sbjct: 203 LNLKELRQLTVSVREATDL-AFLQDLKDLTHLDLSYNHWISDISVLRNLPKLTHLDLGSN 261
Query: 422 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 454
Q+S+ + L ++L HLSL + ++DVS+ Q
Sbjct: 262 QISNIAV--LLDLQQLTHLSLSSNQISDVSVLQ 292
>gi|290977818|ref|XP_002671634.1| predicted protein [Naegleria gruberi]
gi|284085204|gb|EFC38890.1| predicted protein [Naegleria gruberi]
Length = 359
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSI 139
AE+++ L L V + ++ S ++GM LK+L S K+ + G+KH+ +
Sbjct: 177 AEYISNLDELTVL----VINNNQIGSKGAKFISGMKQLKQLSDSY-TKLGETGVKHICEM 231
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
+ L L++ T + G + L+ L +LD+ + + ++ L L +L +L++ GS
Sbjct: 232 TQLTHLYICNTKIGNSGAKNIIKLKQLQLLDISYNGINNEIVELLSQLDQLTFLNISGSA 291
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGV 224
+ N + +L++L++++ G+
Sbjct: 292 IDNLALTFINKMNQLTYLDVSYNGI 316
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 126/286 (44%), Gaps = 44/286 (15%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLS 161
+ S L G+ L ++ + + + +L +S L KL + S+ +T +G+ LS
Sbjct: 74 IDSKGAKYLAGLNNLTDIHVDSYNNFGNESLYYLSKLSQLTKLSIGSKNNITYEGVEYLS 133
Query: 162 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 221
L L+ L + G TD ++ + +L+ L+++ + +S++ A +
Sbjct: 134 QLSKLTYLCITGNETTDEQVKLISSFKQLKTLNIYSNLISDKSAEYI------------- 180
Query: 222 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 281
N+ L L ++N I S G FI+ + + S
Sbjct: 181 ------SNLDELTVLVINNNQIGS----------------KGAKFISGMKQLKQLSDS-- 216
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
+ + + + C +TQ L HL + ++ IG+ + + + L+ L++S ++
Sbjct: 217 -YTKLGETGVKHICEMTQ---LTHLYICNTKIGNSGAKNIIKL-KQLQLLDISYNGINNE 271
Query: 342 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
V +L+ L L L++SG+ ID+ A+++++ M L ++D+S I
Sbjct: 272 IVELLS-QLDQLTFLNISGSAIDNLALTFINKMNQLTYLDVSYNGI 316
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + ++ ++ + L+ L+ + ++ + + + MT L L + K+ ++G K+
Sbjct: 194 NQIGSKGAKFISGMKQLKQLSDS-YTKLGETGVKHICEMTQLTHLYICN-TKIGNSGAKN 251
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
++ + L+ L +S G+ + + LLS L L+ L++ G + +L L + + +L YLD+
Sbjct: 252 IIKLKQLQLLDISYNGINNEIVELLSQLDQLTFLNISGSAIDNLALTFINKMNQLTYLDV 311
Query: 196 WGSQVSNRGAAVL-KMFP 212
+ +++ G + KM P
Sbjct: 312 SYNGINDEGLIYISKMKP 329
>gi|441470006|emb|CCQ19761.1| Internalin-A [Listeria monocytogenes]
Length = 489
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|401414351|ref|XP_003871673.1| hypothetical protein LMXM_03_0010 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487892|emb|CBZ23136.1| hypothetical protein LMXM_03_0010 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 977
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 191/434 (44%), Gaps = 70/434 (16%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP- 175
L+ L L C ++ D + L + L +++L+ TG++ + AL S L V+ +GG
Sbjct: 534 LQCLFLGGCSRIRDISL--LTQATQLREVYLTNTGIS-NIEALKPSAATLEVIAIGGCGR 590
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG----VTKLPNIS 231
++D+ L V TKL + LWG+ ++N A + L L++ G ++ L N +
Sbjct: 591 ISDIA--PLLVATKLRLVYLWGTNINNIHAIRFSI-SSLEVLDIGGCGRVSEISSLLNAT 647
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF--------LYIETSLLSF 283
L + L N I SI + L + L G T I++ +Y+ + +S
Sbjct: 648 KLREVRLHNTAIQSIEALRPSAGCLEWVELVGCTHISDISPLSTATKLREVYLTNTAVSS 707
Query: 284 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD------------DSVEMVACVGANLRNL 331
+D S S + E DLS+ +S++ +A A+LR L
Sbjct: 708 IDPLRCSASSLEVIALGNCAEVFDLSALATATKLREAYLWGTKINSIKALASSIASLRIL 767
Query: 332 NLSN-TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 390
++ T S + A L +++ + T ID + + + PSL+FI++S +
Sbjct: 768 EVTRCTNISDVSILSAAVRLRRVDLANTCITSID----ALVPVAPSLEFINVSGCPMITD 823
Query: 391 IQQVGAETDLV---LSLTALQNLNHLERL--NLEQTQVS------DATLFPLSTFKELIH 439
+GA T++ + L +LN L + LE+ VS D + L+T +L
Sbjct: 824 FAPLGAATNVKTVWMRKLRLDSLNALRPVTGTLEKVDVSGCLNLRDISALELAT--KLTE 881
Query: 440 LSLRNAS-------------LTDVSLHQLSSLSKLTNL----SIRDAVLTNSGLGSFKPP 482
+SL+N S LT V+ + +L+ + L +++ L+N+ + S +P
Sbjct: 882 VSLQNTSIESLDALKSSAPVLTAVNANNCINLTSIEALVSATRLKEVKLSNTRISSLQPL 941
Query: 483 RS----LKLLDLHG 492
R+ L+++D+ G
Sbjct: 942 RASGACLQIVDISG 955
>gi|406867766|gb|EKD20804.1| F-box domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 705
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 203/500 (40%), Gaps = 93/500 (18%)
Query: 57 PSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTC 116
PS F+H++ L E A + AY + L +AD + ++ AL
Sbjct: 121 PSCTSWFRHSSICAALVKE----APYFAYRDFIKRLNMAQLAD--TCSDGSVLALQSCNR 174
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-P 175
++ L L+ C +TD+G+ + LL+ +L LD+ G+
Sbjct: 175 IERLTLTNCGGLTDSGI-----------------------VGLLNGSSHLLALDISGVFE 211
Query: 176 VTDLVLRSLQV-LTKLEYLDLWG-SQVSNRG----AAVLKMFPRLSF---LNLAWTGVTK 226
VT+ + SL KL+ L++ G +++SN A K RL L + +T
Sbjct: 212 VTETSMYSLAANCHKLQGLNISGCTKISNASMIAVAQQCKYIKRLKLNECEQLEDSAITA 271
Query: 227 L----PNISSL---ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 279
PNI + +C ++ N + +++E + L ++ LA I++ EAFL + T+
Sbjct: 272 FAENCPNILEIDLHQCKSIGNAPVTALIEHGQT---LRELRLANCELISD-EAFLPLSTN 327
Query: 280 LLSFLDVSNSSLSRFCFLTQMKALEHL---DLSSSM-IGDDSVEMVACVGANLRNLNLSN 335
K EHL DL+S + + D +VE + V LRNL +
Sbjct: 328 ---------------------KTFEHLRILDLTSCVRLTDRAVEKIIEVAPRLRNLVFAK 366
Query: 336 TRFSSAGVGILAGHL-PNLEILSLSG-TQIDDYAISYMSMMPS-LKFIDISNTDIKGFIQ 392
R + I L NL L L QI D+A+ + + +++ID+
Sbjct: 367 CRNLTDNAVIAISKLGKNLHYLHLGHCNQITDFAVKKLVQSCNRIRYIDL---------- 416
Query: 393 QVGAETDLVL-SLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDV 450
G T L S+T L L L R+ L + + +++A++ L+ RNA+
Sbjct: 417 --GCCTHLTDDSVTKLATLPKLRRIGLVKCSNITNASVDALAQSSSHAPRHYRNAAGVLC 474
Query: 451 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPR 510
+Q SSL ++ +LS + NS + L L L G + QFC+ P
Sbjct: 475 EHNQTSSLERV-HLSYCINLTLNSIIKLLNSCPKLTHLSLTGVQAFLRADLEQFCREAPA 533
Query: 511 IEVWHELSVICPSDQIGSNG 530
H+ +V C +G G
Sbjct: 534 EFTEHQRNVFCVFSGMGVFG 553
>gi|345327823|ref|XP_003431205.1| PREDICTED: F-box/LRR-repeat protein 13-like [Ornithorhynchus
anatinus]
Length = 843
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 95 LNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL---SISTLEKLWLSETG 151
++VADC+R+T S L A++ + L L+LS C +++D G+K L S + +L L+
Sbjct: 539 IHVADCQRITDSGLKAISTLRKLHVLNLSYCTRISDTGVKQFLDGHSSPKIRELNLTHCN 598
Query: 152 LTADG--IALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+D + QNL+ L L +TD + L L+ L +DL G+ +S+ G A L
Sbjct: 599 RISDASLFKISQRCQNLNYLSLRYCDQLTDSGIEILGHLSSLFSIDLSGTTISDSGLAAL 658
Query: 209 KMFPRLSFLNLA-WTGVTKL------PNISSLECLNLSNC 241
++ L ++ +T L N ++L+ L++S C
Sbjct: 659 GQHGKIKQLTVSECKNITDLGIQVFCENTTALDYLDVSYC 698
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 335 NTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFID------ISNTDI 387
N + ++ + PN+ + ++ Q I D + +S + L ++ IS+T +
Sbjct: 518 NNWITDVSFKVIQKYWPNISHIHVADCQRITDSGLKAISTLRKLHVLNLSYCTRISDTGV 577
Query: 388 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST-FKELIHLSLRNA- 445
K F+ G + + L NL H R +SDA+LF +S + L +LSLR
Sbjct: 578 KQFLD--GHSSPKIREL----NLTHCNR-------ISDASLFKISQRCQNLNYLSLRYCD 624
Query: 446 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 505
LTD + L LS L ++ + +++SGL + +K L + +T+ I FC
Sbjct: 625 QLTDSGIEILGHLSSLFSIDLSGTTISDSGLAALGQHGKIKQLTVSECKNITDLGIQVFC 684
Query: 506 K 506
+
Sbjct: 685 E 685
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%), Gaps = 24/179 (13%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+R LN+ C R++ ++L+ ++ C L L L C ++TD+G++ L +S+L + LS
Sbjct: 589 IRELNLTHCNRISDASLFKIS-QRCQNLNYLSLRYCDQLTDSGIEILGHLSSLFSIDLSG 647
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSL-QVLTKLEYLDL-WGSQVSNRGAA 206
T ++ G+A L + L + +TDL ++ + T L+YLD+ + Q+S
Sbjct: 648 TTISDSGLAALGQHGKIKQLTVSECKNITDLGIQVFCENTTALDYLDVSYCLQLSCEMVK 707
Query: 207 VLKMF-PRLSFLNLAWTGVTKLPNIS------------SLE---CLNLSNCTIDSILEG 249
+ ++ +L+ LN+A G ++ +I +L+ C++LS+ TI ++ +G
Sbjct: 708 NVSIYCHKLTALNIA--GCPRVTDIGLQFLSENCHYLHTLDVSGCIHLSDKTIKALWKG 764
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 66/312 (21%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWL 147
F L + NV C V S + L + L+E +K+T G +++ S ++ L +
Sbjct: 408 FHMLATRNVKKCLLVFVSLI--LIRLPVLEENGFEWEMKITVQGFQYIGTKCSIVQHLII 465
Query: 148 SETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL------WGS 198
++ D AL + Q ++ L L G P +TD+ + Q L++ + + L W +
Sbjct: 466 NDMPTLTDSCVKALAGNCQQITSLILSGTPALTDV---AFQALSECKLVKLRVGGNNWIT 522
Query: 199 QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNEN 252
VS + + K +P +S +++A +G+ + + L LNLS CT
Sbjct: 523 DVSFK--VIQKYWPNISHIHVADCQRITDSGLKAISTLRKLHVLNLSYCT---------- 570
Query: 253 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
+IS +T + FLD +S R LT +
Sbjct: 571 -----RIS----------------DTGVKQFLDGHSSPKIRELNLTH----------CNR 599
Query: 313 IGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
I D S+ ++ NL L+L + + +G+ IL GHL +L + LSGT I D ++ +
Sbjct: 600 ISDASLFKISQRCQNLNYLSLRYCDQLTDSGIEIL-GHLSSLFSIDLSGTTISDSGLAAL 658
Query: 372 SMMPSLKFIDIS 383
+K + +S
Sbjct: 659 GQHGKIKQLTVS 670
>gi|299067411|emb|CBJ38610.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum CMR15]
Length = 620
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 136/311 (43%), Gaps = 18/311 (5%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
AL L LD S+ + +AG + L + L +L L+ + G+ L+ +L+ L
Sbjct: 278 ALAASKTLTSLDASKN-GIGNAGAEALAKNTVLRELNLAHNMIGTPGVRALAGNTSLTEL 336
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GV 224
DLGG + D L L L + +++ GA L L+ L+L++ G
Sbjct: 337 DLGGNRLGDAGALELAGNRSLLSLKVDHNEIGGGGAQALARHATLTSLDLSYNAIGLWGA 396
Query: 225 TKLPNISSLECLNLSNCTIDS----ILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 280
L ++L LNLS C IDS L N++ LA++ L G +I + A +
Sbjct: 397 GALGANTTLSVLNLSFCGIDSHSACALACNKS---LAELYLNG-NWIGDYGALELAKNRT 452
Query: 281 LSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
L+ LD+S + + L +AL L L+ + I DD +A L L+LS R
Sbjct: 453 LTLLDLSRNGIRNAGAEALGGNQALTSLKLAGNGIDDDGAAALARH-PRLTTLDLSRNRI 511
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
+ G LA L L LS +I +S +L +++S+ I + A++
Sbjct: 512 GAEGARHLA-QSATLAELDLSQNRIGPDGAEALSQSTALITLNVSHNAIGEAGARSLADS 570
Query: 399 DLVLSLTALQN 409
+ SL A +N
Sbjct: 571 ASLTSLDARRN 581
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + LG + L SL +A + AL L LDLSR ++ G +H
Sbjct: 461 NGIRNAGAEALGGNQALTSLKLAG-NGIDDDGAAALARHPRLTTLDLSRN-RIGAEGARH 518
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L +TL +L LS+ + DG LS L L++ + + RSL L LD
Sbjct: 519 LAQSATLAELDLSQNRIGPDGAEALSQSTALITLNVSHNAIGEAGARSLADSASLTSLDA 578
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
+ + GA VL+ RL TG + PN
Sbjct: 579 RRNGIGEDGAKVLEANTRL-------TGTEQNPN 605
>gi|224073422|ref|XP_002304093.1| predicted protein [Populus trichocarpa]
gi|222841525|gb|EEE79072.1| predicted protein [Populus trichocarpa]
Length = 969
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 300 MKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSS--------AGVGILAGHL 350
K L+ LDL + ++G E + + LR L LS+ RF++ G+ +L+ L
Sbjct: 67 FKELQSLDLGYNGLVGCLENEGFQVLSSKLRELGLSDNRFNNDKSILSCFNGLKVLSSRL 126
Query: 351 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 410
LE L LSG Q +D ++ SLK +D+S Q+ A + L LQ+L
Sbjct: 127 KKLENLDLSGNQCNDTIFPALTGFSSLKSLDLSG-------NQLTASG--LRKLDFLQSL 177
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 470
L+ L+L+ T +S T F ST +E L L N SL L +L L LS+ +
Sbjct: 178 RSLKTLSLKDTNLSQGTFFNSSTLEE---LHLDNTSLPINFLQNTRALPALKVLSVGECD 234
Query: 471 L 471
L
Sbjct: 235 L 235
>gi|313485070|gb|ADR53006.1| InlA [Listeria monocytogenes]
Length = 800
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|114615221|ref|XP_001157713.1| PREDICTED: F-box/LRR-repeat protein 13 [Pan troglodytes]
gi|397466181|ref|XP_003804846.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 3 [Pan paniscus]
Length = 707
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 66/331 (19%)
Query: 90 RYLRSLNVADCRRVTSSALWALT----GMTC----------------------LKELDLS 123
R L+ LNV+DC T ++ ++ G+ C L+ L L+
Sbjct: 245 RNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLA 304
Query: 124 RCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 182
C + TD G+++L + KL +L +G T S+Q + + L +
Sbjct: 305 YCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQ------ISVQGFRYISNSCTGIMHLTIN 358
Query: 183 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 242
+ LT N A+++ R++ +L +TG P+IS LS C
Sbjct: 359 DMPTLT------------DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACK 401
Query: 243 IDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
+ I EGN+ +++ A FI++ Y S + D + S L+ +K
Sbjct: 402 LRKIRFEGNK------RVTDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLK 451
Query: 302 ALEHLDLSSSM-IGDDSVEMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILS 357
L L+L++ + IGD ++ +R LNLSN R S A V L+ PNL LS
Sbjct: 452 QLTVLNLANCVRIGDMGLKQFLDGPASIKIRELNLSNCVRLSDASVMKLSERCPNLNYLS 511
Query: 358 LSGTQ-IDDYAISYMSMMPSLKFIDISNTDI 387
L + + I Y+ + SL ID+S TDI
Sbjct: 512 LRNCEHLTAQGIGYIVNIFSLVSIDLSGTDI 542
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 51/321 (15%)
Query: 89 FRYLRSLNVADCRRVTSSALWALT-GMTCLK--ELDLSRCVKVTDAGMKHLL-SISTLEK 144
F L++L++A CRR T L L G C K LDLS C +++ G +++ S + +
Sbjct: 295 FHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMH 354
Query: 145 LWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQ-V 200
L +++ D AL+ ++ L G P ++D R+L KL + G++ V
Sbjct: 355 LTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKLRKIRFEGNKRV 413
Query: 201 SNRGAAVL-KMFPRLSFLNLA-WTGVT-----KLPNISSLECLNLSNCT------IDSIL 247
++ + K +P LS + +A G+T L + L LNL+NC + L
Sbjct: 414 TDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFL 473
Query: 248 EGNE-------NKAPLAKISLAGTTFINER-----------------EAFLYIET--SLL 281
+G N + ++S A ++ER + YI SL+
Sbjct: 474 DGPASIKIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLV 533
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFS 339
S +D+S + +S F LEHLD+S S + D ++ +A NL +L+++ + +
Sbjct: 534 S-IDLSGTDISNEAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKIT 592
Query: 340 SAGVGILAGHLPNLEILSLSG 360
+ + +L+ L IL +SG
Sbjct: 593 DSAMEMLSAKCHYLHILDISG 613
>gi|290350830|dbj|BAI78336.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLTPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 -AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 264
A L L N + +T L ++ L L L I +I +PLA ++
Sbjct: 269 LASLTNLTDLDLANNQISNLTPLSGLTKLTELKLGANQISNI-------SPLAGLTALTN 321
Query: 265 TFINERE 271
+NE +
Sbjct: 322 LELNENQ 328
>gi|194239392|emb|CAQ76836.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|289433761|ref|YP_003463633.1| hypothetical protein lse_0394 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170005|emb|CBH26545.1| leucine-rich repeat, cell wall anchor family protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 1770
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 211/476 (44%), Gaps = 72/476 (15%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+ L GE +D +A + F+YL ++ D + + LT +T + L+LS +
Sbjct: 147 LNLSGETGIDETDIASIEGFQYLENVTSVDLSENNLTDITPLTDLTKIVTLNLSSNQNLE 206
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL--QVL 187
D + + ++ L+ L +S AD I+ +++L L + G + L L + L
Sbjct: 207 D--LNGVEGLTNLQDLNVSTCKSLAD-ISPVAALPALKEISAQGCNIQTLELENPAGDAL 263
Query: 188 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTI 243
+LE L + + + A L P+L L N + + L +S++ ++ SNCT
Sbjct: 264 PELETFYLQENDLQDLTA--LATLPKLKNLYIKGNSSLESLETLNGSTSIQLIDASNCTD 321
Query: 244 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 303
+ L I L+G + + E T L + +++N + + C + + L
Sbjct: 322 METVGDISGITTLEMIQLSGCSKLKEI-------TDLKNLPNLTNITANN-CIIEDLGTL 373
Query: 304 EHLDLSSSMI--GDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 359
E+L ++I G++++ V + L+ + L ++ +G L +LP LE L +
Sbjct: 374 ENLPKLQTLILSGNENLTDVDAINDLPQLKTVALDGCGITN--IGTLE-NLPKLEKLDIK 430
Query: 360 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 419
G ++ D IS ++ +P L ++D A + + ++ L L L+ LN+
Sbjct: 431 GNKVTD--ISEITDLPRLSYLD--------------ASENQLTTIGTLAKLPLLDWLNIS 474
Query: 420 QTQVSDATL---FP-----------LSTFKELIHL-SLRN-----ASLTDVSL-HQLSSL 458
+ Q+ D + FP ++TF ++ L SL+ +TD+S+ H + +L
Sbjct: 475 ENQLKDVSTINNFPSLNYINVSNNSITTFGKMTELPSLKEFYGQFNKVTDISMIHDMPNL 534
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVW 514
K L++ + ++ N LG+F+ L+ LD+H + I F P +E +
Sbjct: 535 RK---LNVSNNLINN--LGTFENLPKLQNLDIHSNKITNTTVIHDF----PSLETY 581
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 167/406 (41%), Gaps = 82/406 (20%)
Query: 108 LWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLS 167
L L + L+ L LS +TD + + + L+ + L G+T I L +L L
Sbjct: 370 LGTLENLPKLQTLILSGNENLTD--VDAINDLPQLKTVALDGCGIT--NIGTLENLPKLE 425
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT---GV 224
LD+ G VTD+ + L +L YLD +Q++ G L P L +LN++ V
Sbjct: 426 KLDIKGNKVTDI--SEITDLPRLSYLDASENQLTTIG--TLAKLPLLDWLNISENQLKDV 481
Query: 225 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+ + N SL +N+SN +I + G + P K G F + + + L L
Sbjct: 482 STINNFPSLNYINVSNNSITTF--GKMTELPSLK-EFYGQ-FNKVTDISMIHDMPNLRKL 537
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIG--------------DDSVEMVACVGA---- 326
+VSN+ ++ + L++LD+ S+ I D S +++ +G
Sbjct: 538 NVSNNLINNLGTFENLPKLQNLDIHSNKITNTTVIHDFPSLETYDASSNLISTLGTMDNL 597
Query: 327 -NLRNLNLSNTRFSS----------------------AGVGILAGHLPNLEILSLSGTQI 363
+ +NLS+ R S VG L G LP L IL L+ I
Sbjct: 598 PEVTTINLSSNRIPSLEPIGDLPKLDTLLVNSNSSYLRTVGSLDG-LPALRILELNSNYI 656
Query: 364 DDYAISYMSMMPSLK-FIDISN------------TDIKGF-----IQQVGAETDLVLSLT 405
+ Y +L F D++N D+ G ++ + + + + +T
Sbjct: 657 N-----YTGKEATLSAFSDLTNLIELSMKDNYYIVDLSGLSSLTNLRYLYLDNNRIEDVT 711
Query: 406 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L NL L L L ++ D + LS+ +L +L +++ + D+S
Sbjct: 712 PLSNLTELRELTLGTNKIQD--ISALSSLNKLANLVVKSNKIIDIS 755
>gi|290980745|ref|XP_002673092.1| predicted protein [Naegleria gruberi]
gi|284086673|gb|EFC40348.1| predicted protein [Naegleria gruberi]
Length = 498
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/425 (19%), Positives = 163/425 (38%), Gaps = 97/425 (22%)
Query: 76 NSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKH 135
N + E Y+G + L+ L++A+ + G K+
Sbjct: 163 NYIGVEGAKYIGEMKQLKQLHIANNN--------------------------IGPEGAKY 196
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ + L L + +T DG +S ++ L+VL++ G + D + + + +L LD+
Sbjct: 197 ISGLEQLTFLNIRANEITVDGAKFISEMKQLTVLNIIGNNICDEGAKFISGMKQLTNLDI 256
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTIDSILEGNE 251
+ + GA + ++ LN+ + GV + L LN+++ I S
Sbjct: 257 SVNNIGENGAKYVSEMMNITKLNIGFNSINDGVKCFGEMKQLTDLNVNSRCIGS------ 310
Query: 252 NKAPLAKISLAGTTFIN--EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
G +I+ + L I +L+S + + ++QMK L LD+S
Sbjct: 311 ----------NGVEYISSFNQLTHLSIAKNLISLYEAMH--------ISQMKNLIKLDIS 352
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
+ IGD+ V+ ++ + L L++S I I
Sbjct: 353 DNDIGDNGVQSIS--------------------------EMNQLTELNVSSIDITPIGIQ 386
Query: 370 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 429
Y+ M +L ++ ++ +I GA+ + + HL +L++ V D
Sbjct: 387 YICKMDNLTYLISAHNNI-------GAK-----GAKQISEMKHLAQLSIYHNAVGDEGAK 434
Query: 430 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
+S ++L L + + D + L + +LT L+ D +++ G K R + L D
Sbjct: 435 FISEMEQLTFLDIGYNEIGDEGVKFLCGMKQLTRLNTVDNNISDEGE---KYIREMNLAD 491
Query: 490 LHGGW 494
G +
Sbjct: 492 HVGIY 496
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 181/437 (41%), Gaps = 50/437 (11%)
Query: 80 AEWMAYLGAFRYLRSLNVADCRRVTSSALW----ALTGMTCLKELDLSRCVKVTDAGMKH 135
++W +G +L N+A+ R + + + L M LK+L++ + +G K+
Sbjct: 68 SDW-EMVGQLPFLE--NIANLRVINNEEIGFNCEILDSMKELKKLNIEYNSNIDPSGFKY 124
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
+ S+ L L+++ L SL++L+ L + G + + + + +L+ L +
Sbjct: 125 ICSLEQLTDLYMTFCYFRLPIAKHLPSLKSLTYLLITGNYIGVEGAKYIGEMKQLKQLHI 184
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSNCTIDSILEGNENK 253
+ + GA + +L+FLN+ +T IS ++ L + N ++I +
Sbjct: 185 ANNNIGPEGAKYISGLEQLTFLNIRANEITVDGAKFISEMKQLTVLNIIGNNICD----- 239
Query: 254 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 313
G FI+ + ++ S V+N + ++++M + L++ + I
Sbjct: 240 --------EGAKFISGMKQLTNLDIS------VNNIGENGAKYVSEMMNITKLNIGFNSI 285
Query: 314 GDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
D V C G L +LN+++ S GV ++ L LS++ I Y ++
Sbjct: 286 NDG----VKCFGEMKQLTDLNVNSRCIGSNGVEYISS-FNQLTHLSIAKNLISLYEAMHI 340
Query: 372 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 431
S M +L +DIS+ DI + ++ +N L LN+ ++ + +
Sbjct: 341 SQMKNLIKLDISDNDIGDN------------GVQSISEMNQLTELNVSSIDITPIGIQYI 388
Query: 432 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
L +L + ++ Q+S + L LSI + + G L LD+
Sbjct: 389 CKMDNLTYLISAHNNIGAKGAKQISEMKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDI- 447
Query: 492 GGWLLTEDAILQF-CKM 507
G+ D ++F C M
Sbjct: 448 -GYNEIGDEGVKFLCGM 463
>gi|255025517|ref|ZP_05297503.1| internalin A [Listeria monocytogenes FSL J2-003]
Length = 744
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|423524772|ref|ZP_17501245.1| hypothetical protein IGC_04155 [Bacillus cereus HuA4-10]
gi|401168998|gb|EJQ76245.1| hypothetical protein IGC_04155 [Bacillus cereus HuA4-10]
Length = 752
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 384
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 385 ---------VKDLSGIDQMNQLNKLFIGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
F L+ LN R S + L M L+ LDLS K+T+ L+ + ++ L+LS
Sbjct: 260 FANLKQLNHLALRGNEFSDVTPLVKMDNLESLDLSNN-KITNVA--PLIEMKNVKSLYLS 316
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
G + + L+ ++ L L+L +TD+ L L + YL L G+Q+ + +
Sbjct: 317 --GNQIEDVTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTLAGNQIED-----I 367
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK--APLAKISLAGTTF 266
K L +L T K+ ++S ++ +N N + N+ K PLAK++
Sbjct: 368 KPLYSLPLKDLVLTR-NKVKDLSGIDQMNQLNKLF---IGKNQIKDVTPLAKMTQ----- 418
Query: 267 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
L+ LD+ N+ L L+ + L+ LDL ++ I D
Sbjct: 419 --------------LTELDLPNNELKDITPLSSLVNLQKLDLEANYISD 453
>gi|115504803|ref|XP_001219194.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|83642676|emb|CAJ16709.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 735
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 153/376 (40%), Gaps = 75/376 (19%)
Query: 103 VTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS 162
+++ +LW ++ L+ LDLS C V D + + I TLE+L L +G+ L +
Sbjct: 336 ISNESLWNISESKLLRRLDLSFCGGVKD--ISPISDIVTLEELNLKGCTSITEGVDKLGN 393
Query: 163 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL---WG-------SQVSNR--------- 203
L NL +L++ P+ L ++ + L LDL WG Q + R
Sbjct: 394 LVNLHILNMSNTPLQSGFLYNISSIESLVELDLSSCWGVASLDSSVQTAVRMRKGSYPLA 453
Query: 204 ----GAAVLKMFPRLSFLN-------------------LAW---------TGVTKLPNIS 231
G L P+L LN L W T V+ L ++
Sbjct: 454 RHIEGINALGRLPKLRLLNMSSTPVTDECLHGLQMCKSLVWLNLSLCANLTDVSPLSSVK 513
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER--EAFLY---IETSLLSFLDV 286
+LE ++L C G+ + P +I T I + Y + + +L +
Sbjct: 514 TLEEVDLGCCGNLKWGAGSLRRLPQLRILDLKNTVITDHCLGDVTYGGGVVSRMLGRCGM 573
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 346
++ S SR+ + + L LDLSS D + + L L + R GV L
Sbjct: 574 ADLSFSRWS-IRRGGNLVRLDLSSCWGLTDIAHLTSI--TTLEELRFTGCRNLKDGVDAL 630
Query: 347 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 406
G LP L +L LSGT I D ++ +S SL ++IS+ TD ++
Sbjct: 631 -GQLPVLHLLDLSGTSITDDSLQGLSTCRSLVTLNISS---------CANLTD----VSP 676
Query: 407 LQNLNHLERLNLEQTQ 422
L ++ LE LNL++++
Sbjct: 677 LSRISSLEELNLQKSK 692
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 165/405 (40%), Gaps = 55/405 (13%)
Query: 56 FPSLLEVFKHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMT 115
FP EVF + + LRG ++ + ++G + L L+ +C S L L+G +
Sbjct: 59 FPHTGEVF--STYELVLRGI-VLERGDLEFIGNYASLNKLHFIECS--GSCDLGMLSGHS 113
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
L EL + +V+ K L + +L LWL + +T + + L L L G
Sbjct: 114 FLSELRVDVDGEVSH--YKALRELPSLRTLWLRNSNMTLTDFFHVGEVDTLESLTLRG-A 170
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----WTGVTKLPNIS 231
+ L ++ L +L LDL + V+++ + L L L+ V+ L I+
Sbjct: 171 LNFKCLEAVARLPRLRALDLSETLVNDKCLHAISACKTLQQLGLSSCKRLRDVSPLTQIA 230
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
SLE LNLS+C + + L ++ L G L T L S L
Sbjct: 231 SLEELNLSHCENLKEVGALYRLSHLFRLDLRGVHLTYRVVYSLSKCTGLTELYVSSCEGL 290
Query: 292 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 351
S +L+ +++L LD+ + +++AC LP
Sbjct: 291 SGVAWLSNLESLGDLDVQWRKNLKHTGDVLAC--------------------------LP 324
Query: 352 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL--------- 402
L +L LSGT I + ++ +S L+ +D+S G ++ + +D+V
Sbjct: 325 LLRVLDLSGTSISNESLWNISESKLLRRLDLS---FCGGVKDISPISDIVTLEELNLKGC 381
Query: 403 -----SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
+ L NL +L LN+ T + L+ +S+ + L+ L L
Sbjct: 382 TSITEGVDKLGNLVNLHILNMSNTPLQSGFLYNISSIESLVELDL 426
>gi|423460691|ref|ZP_17437488.1| hypothetical protein IEI_03831 [Bacillus cereus BAG5X2-1]
gi|401140744|gb|EJQ48300.1| hypothetical protein IEI_03831 [Bacillus cereus BAG5X2-1]
Length = 495
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 187 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 239
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 240 VTPLVKMDNLASLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 296
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 297 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 345
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 346 ---------VKDLSGIDQMKQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 394
Query: 452 -LHQLSSLSKL 461
L L +L KL
Sbjct: 395 PLSNLVNLQKL 405
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 205 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLASLDLSNNKI 259
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 260 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 283
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 284 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 328
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 329 KPLYSLPLKDLVLT 342
>gi|56797881|emb|CAH04902.1| internalin A [Listeria monocytogenes]
Length = 773
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 152/314 (48%), Gaps = 56/314 (17%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 67 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 124
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 125 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 163
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + +LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 164 --LSF----GNQVTDLKPLANLTSLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 214
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ----- 392
S +GILA NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 215 SDITPLGILA----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANDQISNLAPLSGLT 268
Query: 393 -----QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
++GA + + +++ L L L L L + Q+ D + P+S K L +L+L ++
Sbjct: 269 KLTELKLGA--NQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNI 324
Query: 448 TDVSLHQLSSLSKL 461
+D+S +SSL+KL
Sbjct: 325 SDIS--PVSSLTKL 336
>gi|22347556|gb|AAM95923.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 115
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKL 307
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|325111037|ref|YP_004272105.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
gi|324971305|gb|ADY62083.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
Length = 407
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 38/303 (12%)
Query: 183 SLQVLTKLE----YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSL 233
SL++L E +DL S +S+ LK F RL L LA T +T +L +I+SL
Sbjct: 89 SLELLKVFEKQTVIVDLSLSNISDDSLDSLKDFNRLEVLILAHTRITGSRLDQLSSITSL 148
Query: 234 ECLNLSNCTID--------SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 285
L+L+ D S+ + K P +K+S G + R FL L
Sbjct: 149 HTLDLTAIEFDDESVPSLASLRQLQRLKVPTSKLSEDGFALLCTRMPFLR-SLDLSGRRG 207
Query: 286 VSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
V+NS L+ L +M L L +S + I DD++ ++A + A L+ L+L T +
Sbjct: 208 VANSWLTH---LAKMPRLNVLGVSFAKNIDDDAIPLLAGLPA-LKWLSLEGTSITGMFPA 263
Query: 345 ILAGHLPNLEILSLSGTQID-DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 403
L G+L NL+ LSL+ + + +S + SLK ++++ D K + S
Sbjct: 264 AL-GNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLNLN--DCKN-----------ITS 309
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
L L+ ++HLE + L+ T ++DA L L +L ++ L + ++ +S L L
Sbjct: 310 LKFLRGMSHLEAIGLKNTNLTDAILKELQYCLQLKYVDLTRCRIGKETISTISQLKLLQT 369
Query: 464 LSI 466
+S+
Sbjct: 370 ISL 372
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 134/306 (43%), Gaps = 46/306 (15%)
Query: 99 DCRRV-----TSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT 153
DCRR + L T + +L LS ++D + L + LE L L+ T +T
Sbjct: 79 DCRRAHFPDGSLELLKVFEKQTVIVDLSLS---NISDDSLDSLKDFNRLEVLILAHTRIT 135
Query: 154 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL-KMFP 212
+ LSS+ +L LDL + D + SL L +L+ L + S++S G A+L P
Sbjct: 136 GSRLDQLSSITSLHTLDLTAIEFDDESVPSLASLRQLQRLKVPTSKLSEDGFALLCTRMP 195
Query: 213 RLSFLNL--------AW-TGVTKLPNISSLECLNLSNCTIDSI-------------LEGN 250
L L+L +W T + K+P ++ L N D+I LEG
Sbjct: 196 FLRSLDLSGRRGVANSWLTHLAKMPRLNVLGVSFAKNIDDDAIPLLAGLPALKWLSLEGT 255
Query: 251 E----------NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQ 299
N L +SLA TF + + L L++++ +++ FL
Sbjct: 256 SITGMFPAALGNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLNLNDCKNITSLKFLRG 315
Query: 300 MKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
M LE + L ++ + D + E+ C+ L+ ++L+ R + ++ L L+ +SL
Sbjct: 316 MSHLEAIGLKNTNLTDAILKELQYCL--QLKYVDLTRCRIGKETISTIS-QLKLLQTISL 372
Query: 359 SGTQID 364
SGTQID
Sbjct: 373 SGTQID 378
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHL 136
S+ + A LG L +L++A C L +L+ + LK+L+L+ C +T +K L
Sbjct: 256 SITGMFPAALGNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLNLNDCKNIT--SLKFL 313
Query: 137 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 196
+S LE + L T LT D +L+ LQ +L+Y+DL
Sbjct: 314 RGMSHLEAIGLKNTNLT------------------------DAILKELQYCLQLKYVDLT 349
Query: 197 GSQVSNRGAAVLKMFPRLSFLNLAWTGV 224
++ + + L ++L+ T +
Sbjct: 350 RCRIGKETISTISQLKLLQTISLSGTQI 377
>gi|104646975|gb|ABF74111.1| disease resistance protein [Arabidopsis thaliana]
Length = 585
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 170/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ + P+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|47096455|ref|ZP_00234048.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|254913677|ref|ZP_05263689.1| internalin A [Listeria monocytogenes J2818]
gi|254937992|ref|ZP_05269689.1| internalin A [Listeria monocytogenes F6900]
gi|386046091|ref|YP_005964423.1| internalin A [Listeria monocytogenes J0161]
gi|47015176|gb|EAL06116.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|194239410|emb|CAQ76845.1| internalin A [Listeria monocytogenes]
gi|223006792|gb|ACM69353.1| internalin A [Listeria monocytogenes]
gi|223006794|gb|ACM69354.1| internalin A [Listeria monocytogenes]
gi|258610604|gb|EEW23212.1| internalin A [Listeria monocytogenes F6900]
gi|293591690|gb|EFG00025.1| internalin A [Listeria monocytogenes J2818]
gi|298359952|gb|ADI77555.1| internalin A [Listeria monocytogenes]
gi|298359956|gb|ADI77557.1| internalin A [Listeria monocytogenes]
gi|298359986|gb|ADI77572.1| internalin A [Listeria monocytogenes]
gi|298360086|gb|ADI77622.1| internalin A [Listeria monocytogenes]
gi|298360130|gb|ADI77644.1| internalin A [Listeria monocytogenes]
gi|298360206|gb|ADI77682.1| internalin A [Listeria monocytogenes]
gi|298360572|gb|ADI77865.1| internalin A [Listeria monocytogenes]
gi|298360644|gb|ADI77901.1| internalin A [Listeria monocytogenes]
gi|345533082|gb|AEO02523.1| internalin A [Listeria monocytogenes J0161]
gi|443428774|gb|AGC92186.1| internalin A [Listeria monocytogenes]
gi|443428776|gb|AGC92187.1| internalin A [Listeria monocytogenes]
gi|443428868|gb|AGC92233.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|254465977|ref|ZP_05079388.1| hypothetical protein RBY4I_2585 [Rhodobacterales bacterium Y4I]
gi|206686885|gb|EDZ47367.1| hypothetical protein RBY4I_2585 [Rhodobacterales bacterium Y4I]
Length = 350
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 128/300 (42%), Gaps = 67/300 (22%)
Query: 115 TCLKELDLSRCVKV-TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
T LKEL L ++ + L ++ LE+L L +TA +A L+ L L L L
Sbjct: 8 THLKELTLMADLRFDAPVDLSPLAALPGLERLAL--VSITAPDLAPLTRLPGLKRLSLDS 65
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 232
+ D L +T LE+L +WG +V++ A + RL LN+A +GVT L +
Sbjct: 66 VQAPDFT--PLAGMTGLEHLSVWGIKEVTDLSFA--RGLTRLQSLNIADSGVTDLSPLEG 121
Query: 233 LECLN------------------------LSNCTIDSI---------------------L 247
L+ L +SNC ++S+ L
Sbjct: 122 LQDLEVFLAFNTQVSDLSPLAAANLRVAWISNCPVESVAALAASDRLEMLRADGTRLQSL 181
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
EG +NK L + L+ T E + + L+ L + + +S LT + AL L
Sbjct: 182 EGLQNKPALQTLILSDTPVA---ELAPIADAASLTELALDGTKVSDIAPLTGLSALRKLT 238
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDD 365
L + + S+E +A G NLR L+L+NT V L G + NL LS+SGT I D
Sbjct: 239 LKGTAV--TSLEPLA--GKNLRELSLTNT-----AVAELDGVQDMENLWELSISGTGIRD 289
>gi|386333662|ref|YP_006029832.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334196111|gb|AEG69296.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 637
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 163/388 (42%), Gaps = 39/388 (10%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
F L SLNV R + L G LK L+ + + G L LE L +S
Sbjct: 224 FPQLESLNVKGAR-IGDRGAQLLAGKLSLKTLNAADG-GIGVGGCAALKDSPALESLDMS 281
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
+ G L+ +++ L L VTD +++L +L LD+ G+ + N L
Sbjct: 282 GNRIGGQGPEYLAGSKSIKTLRLCCCGVTDPGIQALAKNNQLTSLDVSGNYIGNDALREL 341
Query: 209 KMFPRLSFLNLAWTGV-TKLP-NISSLECLNLSNCTIDSILEGNENKA-PLAKISLAGTT 265
P L+ L+++ T P + E + ++ ++ EG +A PLA + G
Sbjct: 342 VASPSLTELDVSCNRPHTPAPQHQKEEEGVQMAF----ALAEGMVGRATPLASLKADGNW 397
Query: 266 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 325
F + +L+F V +SLS L S++IG E +A
Sbjct: 398 FND-------FAAEMLAFPTVKTASLS---------------LKSNLIGPAGAEKLA-EN 434
Query: 326 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 384
L++L+L+ R G LAG +L L++ + D + ++ +LK +++ N
Sbjct: 435 PVLKSLDLTQNRIGDEGAQALAGSK-SLTTLAVLNCLVTDTGVEALASNRTLKSLNLGNL 493
Query: 385 -TDIKGFIQQVG----AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 439
T+ + +Q G A V ++AL L L+++ D + L+ + L
Sbjct: 494 VTETENEAEQAGYDETANEITVAGVSALAKNRSLTSLSVQGNLCGDDAVIALAKNRTLTS 553
Query: 440 LSLRNASLTDVSLHQLSSLSKLTNLSIR 467
L++ +T S+ +L+ LT+LS+R
Sbjct: 554 LNVAYTDMTPASVPELARNPVLTSLSVR 581
>gi|421888174|ref|ZP_16319282.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum K60-1]
gi|378966463|emb|CCF96030.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum K60-1]
Length = 468
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 141/375 (37%), Gaps = 57/375 (15%)
Query: 117 LKELDLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 175
LKELDLSRC +T AG+ HL + L +L L+ + G L++ L+ LD+G
Sbjct: 76 LKELDLSRCRGGITAAGIAHLNRLP-LVRLNLNGNRIGLAGAQRLANHPTLTALDVGRCR 134
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
+ R L +L L++ +++ G L L+ L+++ G + E
Sbjct: 135 IGPEEARELAASARLTTLNVSRNRIGGEGVRALADCKTLTSLDVSENG------LGDAEA 188
Query: 236 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 295
L + L N N+ +DV + C
Sbjct: 189 QRLGASERLTTLNVNRNR------------------------------IDVPGARALAAC 218
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
K L LD+ + IGD+ V+ + A L LN+ + GV LA L
Sbjct: 219 -----KTLTSLDIGGNSIGDEGVDAL-VANAQLTTLNVERAGVGAHGVQALA-DCKTLTS 271
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L + I D + ++ SL + I + A + L
Sbjct: 272 LRIDSNNIGDEGANTLAASISLTTLHSEGNGIGLAGAKALAANTM------------LTT 319
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
LNL V DA L L+ LS+R L+D +L++ LT L I D + ++G
Sbjct: 320 LNLGHNSVGDAGAQALFANTTLVWLSVRRNGLSDAGAIRLAASRTLTTLDIGDNAIKDAG 379
Query: 476 LGSFKPPRSLKLLDL 490
+ R+L L++
Sbjct: 380 ARALAANRTLTTLNV 394
>gi|104646927|gb|ABF74087.1| disease resistance protein [Arabidopsis thaliana]
gi|104646941|gb|ABF74094.1| disease resistance protein [Arabidopsis thaliana]
gi|104646945|gb|ABF74096.1| disease resistance protein [Arabidopsis thaliana]
gi|104646947|gb|ABF74097.1| disease resistance protein [Arabidopsis thaliana]
gi|104646953|gb|ABF74100.1| disease resistance protein [Arabidopsis thaliana]
gi|104646955|gb|ABF74101.1| disease resistance protein [Arabidopsis thaliana]
gi|104646957|gb|ABF74102.1| disease resistance protein [Arabidopsis thaliana]
gi|104646963|gb|ABF74105.1| disease resistance protein [Arabidopsis thaliana]
gi|104646969|gb|ABF74108.1| disease resistance protein [Arabidopsis thaliana]
gi|104646993|gb|ABF74120.1| disease resistance protein [Arabidopsis thaliana]
gi|104647013|gb|ABF74130.1| disease resistance protein [Arabidopsis thaliana]
gi|104647015|gb|ABF74131.1| disease resistance protein [Arabidopsis thaliana]
gi|104647029|gb|ABF74138.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 170/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ + P+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|22347554|gb|AAM95922.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 115
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKL 307
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|298360234|gb|ADI77696.1| internalin A [Listeria monocytogenes]
gi|298360500|gb|ADI77829.1| internalin A [Listeria monocytogenes]
gi|298360708|gb|ADI77933.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L ++++L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L ++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNDISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|228920141|ref|ZP_04083490.1| Internalin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228839597|gb|EEM84889.1| Internalin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 766
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 392
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 439
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 374 KPLYSLPLKDLVLTRNNV 391
>gi|255581263|ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223528936|gb|EEF30930.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 912
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 50/407 (12%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA--DGIALLSSLQNLSVLDLGGL 174
L+EL L + +++ ++ ++ + +++L+ L LS GLT + L L +L VLD+
Sbjct: 179 LEELYLDK-IELENSFLQTVGVMTSLKVLSLSGCGLTGALPNVQGLCELIHLRVLDVSSN 237
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQ----VSNRGAAVLKMFPRLSFLNLAWT---GVTKL 227
++ L LT L+ LDL +Q +SN +LK L N + +
Sbjct: 238 EFHGILPWCLSNLTSLQLLDLSSNQFVGDISNSPLKILKSLVDLDVSNNHFQVPFSLGPF 297
Query: 228 PNISSLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFINEREAFLYIETSLLSFL 284
N S+L+ + N I LE + AP L I +G FLY + +L F+
Sbjct: 298 FNHSNLKHIRGQNNAI--YLEAELHSAPRFQLISIIFSGYGICGTFPNFLYHQNNL-QFV 354
Query: 285 DVSNSSL-SRF--CFLTQMKALEHLDL-SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
D+S+ SL F LT LE LDL ++S+ G + + V NL L++SN
Sbjct: 355 DLSHLSLKGEFPNWLLTNNTRLEILDLVNNSLSGHLQLPLHPHV--NLLALDISNNHVHD 412
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--- 397
+ LP LE+L++S D S M SL+ +D+SN + G I + A
Sbjct: 413 HIPLEIGTFLPKLELLNMSSNGFDGSIPSSFGNMNSLRILDLSNNQLSGSIPEHLATGCF 472
Query: 398 --TDLVLSLTALQ--------NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
L+LS +LQ NL +L L L++ S P S K + S+
Sbjct: 473 SLNTLILSNNSLQGQMFSKQFNLTNLWWLELDKNHFSGR--IPKSLSKSAL-------SI 523
Query: 448 TDVSLHQLSSL--SKLTNLS-IRDAVLTNSGLGSFKPPRSLKLLDLH 491
D+S + LS + + NLS +++ +L+N+ L K P ++ LH
Sbjct: 524 MDLSDNHLSGMIPGWIGNLSYLQNLILSNNRL---KGPIPVEFCQLH 567
>gi|170037242|ref|XP_001846468.1| leucine-rich repeat-containing protein 1 [Culex quinquefasciatus]
gi|167880302|gb|EDS43685.1| leucine-rich repeat-containing protein 1 [Culex quinquefasciatus]
Length = 831
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 148/341 (43%), Gaps = 42/341 (12%)
Query: 87 GAFRY---LRSLNVADCRRVTSSALWALTGMTCLKELDL-SRCVKVTDAGMKHLLSISTL 142
G FR+ L++L++ +++ S + L+ L+L + + G+ + L
Sbjct: 419 GFFRFNRKLKTLSINGNKKLLSIEREWFKNVPSLRILNLMNNSISSLQPGV--FDDLEDL 476
Query: 143 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 202
E L+LS + + LL+ L L L+L G+ +T L + L LE LDL +Q+
Sbjct: 477 ESLFLSNNPVGTLDVKLLTKLPRLEALELAGMALTTLPIGIFDNLADLEELDLGYNQLKT 536
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTKL-PNI-SSLECLNLSNCTIDSILEGNE--------- 251
+ + + L L LA G+ L P + L LN ID L GNE
Sbjct: 537 LDSYIFRNLFSLETLLLAENGIESLSPELFYGLRNLN----EID--LSGNELTTLETHVF 590
Query: 252 -NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL----------SRFCFLTQM 300
N L K+ +A F+ + +LL LD+S++ L S F Q+
Sbjct: 591 RNCLNLEKLDIASNKFVTFNLPQMSFAKTLLD-LDISDNMLTTITVTEDLESLFANDNQI 649
Query: 301 KALEHL-----DLSSSMIGDDSVEMVACV--GANLRNLNLSNTRFSSAGVGILAGHLPNL 353
LE + DL+ + ++ + V+ + +L LN+S F+ +G L G L L
Sbjct: 650 TGLESVASPSHDLTMLSLANNRLSDVSTILMFTDLEYLNISRNNFNQLDLGRLTGSLDEL 709
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 394
E+L++S I ++ S+K +D+S+ ++ +V
Sbjct: 710 EVLNVSHCGISSLGNPNIANQESMKVLDLSHNELPSLPLEV 750
>gi|290350826|dbj|BAI78334.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|62632752|ref|NP_001015043.1| F-box and leucine-rich repeat protein 14b [Danio rerio]
gi|190338219|gb|AAI63001.1| F-box and leucine-rich repeat protein 14b [Danio rerio]
gi|190338703|gb|AAI63002.1| F-box and leucine-rich repeat protein 14b [Danio rerio]
Length = 400
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 39/328 (11%)
Query: 66 NAEAIELRGENSVDAEWM--AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDL 122
N E++ L G ++ + A++ LR LN++ C+++T S+L + + L+ L+L
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNLEVLEL 150
Query: 123 SRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLV 180
C +T+ G+ + + L+ L L +D GI L+ + + G L + L
Sbjct: 151 GGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAA--EGCLSLEYLT 208
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECLNLS 239
L+ Q LT L + ++G LK+ LSF ++ G+ L +++SL LNL
Sbjct: 209 LQDCQKLTDLSLKHI------SKGLTKLKVL-NLSFCGGISDAGMIHLSHMTSLWSLNLR 261
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLT 298
+C D+I + + + L+G +SF D + + SL+ ++
Sbjct: 262 SC--DNISDTGIMHLAMGTLRLSGLD---------------VSFCDKIGDQSLA---YIA 301
Query: 299 Q-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEIL 356
Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL L +
Sbjct: 302 QGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTGI 361
Query: 357 SLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L G T+I + ++ +P LK +++
Sbjct: 362 DLYGCTKITKRGLERITQLPCLKVLNLG 389
>gi|298360230|gb|ADI77694.1| internalin A [Listeria monocytogenes]
gi|298360588|gb|ADI77873.1| internalin A [Listeria monocytogenes]
gi|298360606|gb|ADI77882.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|130774795|gb|ABO32412.1| InlA [Listeria monocytogenes]
gi|150371796|dbj|BAF65687.1| internalin A [Listeria monocytogenes]
gi|150371806|dbj|BAF65692.1| internalin A [Listeria monocytogenes]
gi|150371822|dbj|BAF65700.1| internalin A [Listeria monocytogenes]
gi|194326149|emb|CAQ77233.1| internalin A [Listeria monocytogenes]
gi|298359930|gb|ADI77544.1| internalin A [Listeria monocytogenes]
gi|298360322|gb|ADI77740.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|423516081|ref|ZP_17492562.1| hypothetical protein IG7_01151 [Bacillus cereus HuA2-4]
gi|401165924|gb|EJQ73234.1| hypothetical protein IG7_01151 [Bacillus cereus HuA2-4]
Length = 766
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 31/267 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLNYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRD 468
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRD 475
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLNYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|130774819|gb|ABO32422.1| InlA [Listeria monocytogenes]
gi|167861894|gb|ACA05646.1| InlA [Listeria monocytogenes]
gi|167861946|gb|ACA05672.1| InlA [Listeria monocytogenes]
gi|167861948|gb|ACA05673.1| InlA [Listeria monocytogenes]
gi|194239402|emb|CAQ76841.1| internalin A [Listeria monocytogenes]
gi|298360052|gb|ADI77605.1| internalin A [Listeria monocytogenes]
gi|298360164|gb|ADI77661.1| internalin A [Listeria monocytogenes]
gi|298360372|gb|ADI77765.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|345783005|ref|XP_852464.2| PREDICTED: F-box/LRR-repeat protein 13 [Canis lupus familiaris]
Length = 1050
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 190/441 (43%), Gaps = 53/441 (12%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK--VTDAGMKHLLSISTLEKLW 146
F YL + C +V S + + +D S+ VK +TD + L L L
Sbjct: 483 FYYLTLRELVICGQVCHSWMLMTQASSLWNSIDFSK-VKNIITDKYIVSTLQRWRLNVLR 541
Query: 147 LSETGL-----TADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQV 200
L+ G T ++L +LQ L+V D L TD +R + + + YL+L + +
Sbjct: 542 LNFRGCLLRSKTLRSVSLCRNLQELNVSDCPTL--TDESMRYISEGCAGVLYLNLSNTTI 599
Query: 201 SNRGAAVL-KMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
+NR +L + FP L L+LA+ K + L LNL N L +
Sbjct: 600 TNRTMRLLPRYFPNLQNLSLAY--CRKFTD-KGLRYLNLGN-----------GCHKLIYL 645
Query: 260 SLAGTTFINEREAFLYIETSLLSFLDVSNS---SLSRFCFLTQMKAL-EHLDLSSSMIGD 315
L+G T I+ + F I S + ++ + +L+ C +KAL E +S++
Sbjct: 646 DLSGCTQISV-QGFRNIANSCTGIMHLTINDMPTLTDNC----VKALAEKCTRITSIVFI 700
Query: 316 DSVEMVACVGANLRNLNL------SNTRFSSAGVGILAGHLPNL-EILSLSGTQIDDYAI 368
+ + C L NL N R + A + + PN+ I + +I D ++
Sbjct: 701 GAPHISDCAFKALSTCNLRKIRFEGNKRITDACFKYIHKNYPNINHIYMVDCKRITDGSL 760
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDAT 427
+S + L ++++N I+ I VG + L ++ + LNL +SDA+
Sbjct: 761 MSLSPLKQLTVLNLANC-IR--IGDVGLKQFLDGPVST-----RIRELNLSNCIHLSDAS 812
Query: 428 LFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 485
+ LS L +LSLRN LTD+ + + + L ++ + ++N GL S + L
Sbjct: 813 IVKLSERCSNLNYLSLRNCEYLTDLGIEHIVYIFSLVSVDLSGTNISNEGLMSLSRHKKL 872
Query: 486 KLLDLHGGWLLTEDAILQFCK 506
K L L + +T+ I FCK
Sbjct: 873 KELSLSECYKITDVGIQAFCK 893
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 66 NAEAIELRGENSVDAEWMAYLGA-FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSR 124
N I G + Y+ + + + + DC+R+T +L +L+ + L L+L+
Sbjct: 717 NLRKIRFEGNKRITDACFKYIHKNYPNINHIYMVDCKRITDGSLMSLSPLKQLTVLNLAN 776
Query: 125 CVKVTDAGMKHLLS--IST-LEKLWLSETGLTADG--IALLSSLQNLSVLDLGGLP-VTD 178
C+++ D G+K L +ST + +L LS +D + L NL+ L L +TD
Sbjct: 777 CIRIGDVGLKQFLDGPVSTRIRELNLSNCIHLSDASIVKLSERCSNLNYLSLRNCEYLTD 836
Query: 179 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 238
L + + + L +DL G+ +SN G L +L L+L+ EC +
Sbjct: 837 LGIEHIVYIFSLVSVDLSGTNISNEGLMSLSRHKKLKELSLS-------------ECYKI 883
Query: 239 SNCTIDSILEGN 250
++ I + +G+
Sbjct: 884 TDVGIQAFCKGS 895
>gi|194326157|emb|CAQ77237.1| internalin A [Listeria monocytogenes]
gi|290350820|dbj|BAI78331.1| internalin A [Listeria monocytogenes]
gi|290350836|dbj|BAI78339.1| internalin A [Listeria monocytogenes]
gi|298360124|gb|ADI77641.1| internalin A [Listeria monocytogenes]
gi|298360394|gb|ADI77776.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|441473145|emb|CCQ22899.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 455
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|290997259|ref|XP_002681199.1| predicted protein [Naegleria gruberi]
gi|284094822|gb|EFC48455.1| predicted protein [Naegleria gruberi]
Length = 449
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 127/309 (41%), Gaps = 62/309 (20%)
Query: 70 IELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVT 129
+E+ ++S D E + F L LN+ C + + + ++ ++ L L+ S+C ++
Sbjct: 141 LEISTDSSNDWEKAKSISTFSQLTKLNIQ-CSKNINMIITSVGSLSNLTYLNASQC-NIS 198
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
+K L + L KL LS+ + DG+ +++ L NL L+L +T+ + L LTK
Sbjct: 199 SVNLK-FLQLFKLTKLDLSKNNIGGDGMKVIALLTNLKYLNLQDCNITNDCITHLTSLTK 257
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 249
L +L++ + + N G ++ L++L S+ G
Sbjct: 258 LVHLNVGDNYIGNEGLFLISSLRNLTYL---------------------------SVERG 290
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL----SRFCFLTQMKALEH 305
G F NER+ +D++N + LT + L H
Sbjct: 291 ------------TGRRF-NERQ------------VDIANQGMEINHQGIAHLTNLHNLRH 325
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
LD S I D +E + + + + LN+S R + +G P+L L++ G I D
Sbjct: 326 LDFSGKPICDKGIEFIGKLNS-IEILNVS--RCNCSGDIESLQKSPHLINLNIVGNPIGD 382
Query: 366 YAISYMSMM 374
+S M
Sbjct: 383 KGAEILSRM 391
>gi|290971150|ref|XP_002668393.1| predicted protein [Naegleria gruberi]
gi|284081777|gb|EFC35649.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
++ Q+K L L++ I D+ VE +A + L +L +S S GV I++ L
Sbjct: 104 YIGQLKQLTSLEIQGMDIDDEHVESMAEL-KQLTSLYISGNYIGSEGVKIISESFNKLTK 162
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 415
L++S ID+ Y+S + L ++I+ D +G + LS L HL
Sbjct: 163 LNISANYIDNVGAKYISQLKQLTSLEIACND------SIGDAGIIYLS-----GLEHLTN 211
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 475
L++ + ++ + F++L L++ S+ D L +S L KL L I + ++ G
Sbjct: 212 LDISRIKIGSGGAQYIGKFEQLTCLNINTCSIDDEVLQSISQLKKLIVLHISENEISIEG 271
>gi|130774793|gb|ABO32411.1| InlA [Listeria monocytogenes]
gi|194239384|emb|CAQ76832.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|229120202|ref|ZP_04249453.1| hypothetical protein bcere0016_5180 [Bacillus cereus 95/8201]
gi|228663243|gb|EEL18832.1| hypothetical protein bcere0016_5180 [Bacillus cereus 95/8201]
Length = 1019
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 227 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 247 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 306
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 307 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 361
Query: 345 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 362 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 404
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 405 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 450
>gi|38154342|gb|AAR12158.1| internalin A [Listeria monocytogenes]
Length = 728
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 115
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKL 307
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|38154344|gb|AAR12159.1| internalin A [Listeria monocytogenes]
Length = 685
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 115
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKL 307
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|356518354|ref|XP_003527844.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
protein kinase At2g25790-like [Glycine max]
Length = 984
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 162/368 (44%), Gaps = 31/368 (8%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 169
++T MT L+ L L+ ++ D + + + +L+ ++L L+ + + + L +L+ L
Sbjct: 202 SVTNMTTLEYLTLASN-QLVDKIPEEIGVMKSLKWIYLGYNNLSDEIPSSIGELLSLNHL 260
Query: 170 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---- 225
DL +T + SL LT+L+YL L+ +++S + +L L+L+ ++
Sbjct: 261 DLVYNNLTGPIPHSLGHLTELQYLFLYQNKLSGPIPGSIFELKKLISLDLSDNSLSGEIS 320
Query: 226 -KLPNISSLECLNL-SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 283
++ + LE L+L SN +I +G + L + L E L ++L +
Sbjct: 321 ERVVQLQRLEILHLFSNKFTGNIPKGVASLPRLQVLQLWSNGLTGEIPEELGRHSNL-TV 379
Query: 284 LDVSNSSLS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LD+S ++LS C+ + L + S+S G+ + +C +LR + L N F
Sbjct: 380 LDLSTNNLSGKIPDSICYSGSLFKL--ILFSNSFEGEIPKSLTSC--RSLRRVRLQNNTF 435
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
S L+ LP + L +SG Q+ MPSL+ + ++N + G I
Sbjct: 436 SGKLPSELST-LPEIYFLDISGNQLSGRIDDRKWHMPSLQMLSLANNNFSGEIPNTFGTQ 494
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
L E L+L Q S + + EL+ L LRN L ++ S
Sbjct: 495 KL-------------EDLDLSHNQFSGSIPLGFKSLSELVELKLRNNKLFGDIPEEICSC 541
Query: 459 SKLTNLSI 466
KL +L +
Sbjct: 542 KKLVSLDL 549
>gi|298359882|gb|ADI77520.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|167861888|gb|ACA05643.1| InlA [Listeria monocytogenes]
gi|194326163|emb|CAQ77240.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|49481764|ref|YP_034811.1| internalin protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49333320|gb|AAT63966.1| possible internalin protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 954
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 227 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 247 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 306
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 307 SLRNNKISNLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 361
Query: 345 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 362 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 404
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 405 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 450
>gi|423637920|ref|ZP_17613573.1| hypothetical protein IK7_04329 [Bacillus cereus VD156]
gi|401272722|gb|EJR78713.1| hypothetical protein IK7_04329 [Bacillus cereus VD156]
Length = 760
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|301052969|ref|YP_003791180.1| internalin [Bacillus cereus biovar anthracis str. CI]
gi|300375138|gb|ADK04042.1| internalin [Bacillus cereus biovar anthracis str. CI]
Length = 659
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 119 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 171
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 172 VTPLVKMDHLNSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 228
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 229 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 277
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 278 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 326
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 327 --PLSSLVNLQKLDLE 340
>gi|405757422|ref|YP_006686698.1| internalin A protein InlA, N-terminal part, partial [Listeria
monocytogenes SLCC2479]
gi|145687805|gb|ABP88875.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687811|gb|ABP88878.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687813|gb|ABP88879.1| truncated internalin A precursor [Listeria monocytogenes]
gi|167861890|gb|ACA05644.1| InlA [Listeria monocytogenes]
gi|167861942|gb|ACA05670.1| InlA [Listeria monocytogenes]
gi|167861986|gb|ACA05692.1| InlA [Listeria monocytogenes]
gi|194326143|emb|CAQ77230.1| internalin A [Listeria monocytogenes]
gi|298359794|gb|ADI77476.1| truncated internalin A [Listeria monocytogenes]
gi|298359982|gb|ADI77570.1| truncated internalin A [Listeria monocytogenes]
gi|298360074|gb|ADI77616.1| truncated internalin A [Listeria monocytogenes]
gi|298360136|gb|ADI77647.1| truncated internalin A [Listeria monocytogenes]
gi|298360184|gb|ADI77671.1| truncated internalin A [Listeria monocytogenes]
gi|298360286|gb|ADI77722.1| truncated internalin A [Listeria monocytogenes]
gi|298360300|gb|ADI77729.1| truncated internalin A [Listeria monocytogenes]
gi|298360306|gb|ADI77732.1| truncated internalin A [Listeria monocytogenes]
gi|298360344|gb|ADI77751.1| truncated internalin A [Listeria monocytogenes]
gi|298360352|gb|ADI77755.1| truncated internalin A [Listeria monocytogenes]
gi|298360358|gb|ADI77758.1| truncated internalin A [Listeria monocytogenes]
gi|298360602|gb|ADI77880.1| truncated internalin A [Listeria monocytogenes]
gi|298360636|gb|ADI77897.1| truncated internalin A [Listeria monocytogenes]
gi|371942098|gb|AEX60861.1| truncated internaline [Listeria monocytogenes]
gi|371942122|gb|AEX60873.1| truncated internaline [Listeria monocytogenes]
gi|404235304|emb|CBY56706.1| similar to internalin A protein InlA, N-terminal part [Listeria
monocytogenes SLCC2479]
Length = 576
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|386052707|ref|YP_005970265.1| internalin A [Listeria monocytogenes Finland 1998]
gi|130774801|gb|ABO32414.1| InlA [Listeria monocytogenes]
gi|130774805|gb|ABO32415.1| InlA [Listeria monocytogenes]
gi|130774807|gb|ABO32416.1| InlA [Listeria monocytogenes]
gi|150371724|dbj|BAF65677.1| internalin A [Listeria monocytogenes]
gi|150371780|dbj|BAF65679.1| internalin A [Listeria monocytogenes]
gi|150371784|dbj|BAF65681.1| internalin A [Listeria monocytogenes]
gi|150371788|dbj|BAF65683.1| internalin A [Listeria monocytogenes]
gi|150371790|dbj|BAF65684.1| internalin A [Listeria monocytogenes]
gi|150371792|dbj|BAF65685.1| internalin A [Listeria monocytogenes]
gi|150371798|dbj|BAF65688.1| internalin A [Listeria monocytogenes]
gi|150371802|dbj|BAF65690.1| internalin A [Listeria monocytogenes]
gi|150371808|dbj|BAF65693.1| internalin A [Listeria monocytogenes]
gi|150371814|dbj|BAF65696.1| internalin A [Listeria monocytogenes]
gi|150371818|dbj|BAF65698.1| internalin A [Listeria monocytogenes]
gi|150371824|dbj|BAF65701.1| internalin A [Listeria monocytogenes]
gi|150371830|dbj|BAF65704.1| internalin A [Listeria monocytogenes]
gi|150371832|dbj|BAF65705.1| internalin A [Listeria monocytogenes]
gi|150371834|dbj|BAF65706.1| internalin A [Listeria monocytogenes]
gi|150371836|dbj|BAF65707.1| internalin A [Listeria monocytogenes]
gi|150371838|dbj|BAF65708.1| internalin A [Listeria monocytogenes]
gi|150371844|dbj|BAF65711.1| internalin A [Listeria monocytogenes]
gi|150371848|dbj|BAF65713.1| internalin A [Listeria monocytogenes]
gi|150371850|dbj|BAF65714.1| internalin A [Listeria monocytogenes]
gi|150371854|dbj|BAF65716.1| internalin A [Listeria monocytogenes]
gi|150371864|dbj|BAF65721.1| internalin A [Listeria monocytogenes]
gi|150371870|dbj|BAF65724.1| internalin A [Listeria monocytogenes]
gi|290350828|dbj|BAI78335.1| internalin A [Listeria monocytogenes]
gi|290350832|dbj|BAI78337.1| internalin A [Listeria monocytogenes]
gi|290350834|dbj|BAI78338.1| internalin A [Listeria monocytogenes]
gi|290350840|dbj|BAI78341.1| internalin A [Listeria monocytogenes]
gi|298359802|gb|ADI77480.1| internalin A [Listeria monocytogenes]
gi|298359828|gb|ADI77493.1| internalin A [Listeria monocytogenes]
gi|298359876|gb|ADI77517.1| internalin A [Listeria monocytogenes]
gi|298359878|gb|ADI77518.1| internalin A [Listeria monocytogenes]
gi|298359918|gb|ADI77538.1| internalin A [Listeria monocytogenes]
gi|298359964|gb|ADI77561.1| internalin A [Listeria monocytogenes]
gi|298359966|gb|ADI77562.1| internalin A [Listeria monocytogenes]
gi|298360014|gb|ADI77586.1| internalin A [Listeria monocytogenes]
gi|298360038|gb|ADI77598.1| internalin A [Listeria monocytogenes]
gi|298360084|gb|ADI77621.1| internalin A [Listeria monocytogenes]
gi|298360104|gb|ADI77631.1| internalin A [Listeria monocytogenes]
gi|298360134|gb|ADI77646.1| internalin A [Listeria monocytogenes]
gi|298360170|gb|ADI77664.1| internalin A [Listeria monocytogenes]
gi|298360178|gb|ADI77668.1| internalin A [Listeria monocytogenes]
gi|298360214|gb|ADI77686.1| internalin A [Listeria monocytogenes]
gi|298360242|gb|ADI77700.1| internalin A [Listeria monocytogenes]
gi|298360244|gb|ADI77701.1| internalin A [Listeria monocytogenes]
gi|298360254|gb|ADI77706.1| internalin A [Listeria monocytogenes]
gi|298360278|gb|ADI77718.1| internalin A [Listeria monocytogenes]
gi|298360310|gb|ADI77734.1| internalin A [Listeria monocytogenes]
gi|298360334|gb|ADI77746.1| internalin A [Listeria monocytogenes]
gi|298360338|gb|ADI77748.1| internalin A [Listeria monocytogenes]
gi|298360376|gb|ADI77767.1| internalin A [Listeria monocytogenes]
gi|298360384|gb|ADI77771.1| internalin A [Listeria monocytogenes]
gi|298360436|gb|ADI77797.1| internalin A [Listeria monocytogenes]
gi|298360532|gb|ADI77845.1| internalin A [Listeria monocytogenes]
gi|298360542|gb|ADI77850.1| internalin A [Listeria monocytogenes]
gi|298360552|gb|ADI77855.1| internalin A [Listeria monocytogenes]
gi|298360564|gb|ADI77861.1| internalin A [Listeria monocytogenes]
gi|298360568|gb|ADI77863.1| internalin A [Listeria monocytogenes]
gi|298360596|gb|ADI77877.1| internalin A [Listeria monocytogenes]
gi|298360666|gb|ADI77912.1| internalin A [Listeria monocytogenes]
gi|298360710|gb|ADI77934.1| internalin A [Listeria monocytogenes]
gi|346645358|gb|AEO37983.1| internalin A [Listeria monocytogenes Finland 1998]
gi|443428778|gb|AGC92188.1| internalin A [Listeria monocytogenes]
gi|443428804|gb|AGC92201.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|449436890|ref|XP_004136225.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
protein kinase At2g25790-like [Cucumis sativus]
gi|449526654|ref|XP_004170328.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
protein kinase At2g25790-like [Cucumis sativus]
Length = 955
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 152/378 (40%), Gaps = 51/378 (13%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N++ E LG L L++ ++T +L +T L+ L L + +T
Sbjct: 243 GYNNLSGEIPEELGGLDSLNHLDLV-YNKLTGGIPESLGNLTGLQYLFLYQN-GLTGTIP 300
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
+ S+ L L +S+ L+ + L+ LQNL +L L T + R+L L +L+ L
Sbjct: 301 PSIFSLVNLISLDISDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPRALASLPRLQIL 360
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-KLPN-----ISSLECLNLSNCTIDSIL 247
LW + S +L L+ L+++ +T K+P+ + + SN I I
Sbjct: 361 QLWSNGFSGEIPELLGRNNNLTILDVSTNFLTGKIPDGLCDSKRLFKLILFSNSLIGQIP 420
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS--------------- 292
+ L ++ L E ++ + LL FLD+S++ S
Sbjct: 421 RSLCSCQSLQRVRLQNNRLFGELSPKIFTKLPLLYFLDISDNQFSGRIDSNKWYLPSLQM 480
Query: 293 ------RFC-----FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 341
+F F+T K +E LD S + + E + + + L LNLSN
Sbjct: 481 MSLARNKFSGNLPEFITNDK-IESLDFSGNELSGSLPENIGSL-SELMELNLSNNN---- 534
Query: 342 GVGILAGHLPN-------LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 394
L G +PN L L LS Q+ ++ +P L F+D+S G I V
Sbjct: 535 ----LGGGIPNEISSCKKLVSLDLSHNQLSGEIPVILTQIPVLSFLDLSENKFSGEIPPV 590
Query: 395 GAETDLVLSLTALQNLNH 412
A+ ++ + N H
Sbjct: 591 LAQIPSLVQINISHNHLH 608
>gi|298359950|gb|ADI77554.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|290995863|ref|XP_002680502.1| predicted protein [Naegleria gruberi]
gi|284094123|gb|EFC47758.1| predicted protein [Naegleria gruberi]
Length = 350
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVA 322
T++++REA + E + L+ L+VSNS + + +M L L++ ++ IG + + V+
Sbjct: 135 TYVHDREAKIISEMTQLTSLNVSNSIRIKKSIAYFREMNNLTCLNIGNNGIGVECAKHVS 194
Query: 323 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
+ L L++ G ++ L L L +S I + Y+S + L +DI
Sbjct: 195 EM-KQLTILHICGNGIKFEGAKFIS-ELQQLTKLDVSSNNIGEQGAKYISQLKQLTNLDI 252
Query: 383 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 442
+ ++GA+ + + L RLN+ ++ +S K+LI+L++
Sbjct: 253 -------YSNRIGAQ-----GAKHISEMKQLTRLNISYNDINVEGAKYISEMKQLINLNI 300
Query: 443 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 476
++ D +S +++LTNL I + ++N+G
Sbjct: 301 TKNNIGDEGARHISGMNQLTNLFIGNNNISNAGF 334
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 28 RRQRRSLERLPAHLADSLLRHLIRRRLIFPSL--LEVFKHNAEAIELRGENSVDAEWMAY 85
R Q + LE + + A + + HLI+ R F + L F + + R E + +E
Sbjct: 93 RVQGQFLENIASVKALNAINHLIQYRDAFKLMKGLTTFDISYTYVHDR-EAKIISEMTQ- 150
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM-----KHLLSIS 140
L SLNV++ R+ S + +E++ C+ + + G+ KH+ +
Sbjct: 151 ------LTSLNVSNSIRIKKSIAY-------FREMNNLTCLNIGNNGIGVECAKHVSEMK 197
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L + G+ +G +S LQ L+ LD+ + + + + L +L LD++ +++
Sbjct: 198 QLTILHICGNGIKFEGAKFISELQQLTKLDVSSNNIGEQGAKYISQLKQLTNLDIYSNRI 257
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVT 225
+GA + +L+ LN+++ +
Sbjct: 258 GAQGAKHISEMKQLTRLNISYNDIN 282
>gi|290978509|ref|XP_002671978.1| predicted protein [Naegleria gruberi]
gi|284085551|gb|EFC39234.1| predicted protein [Naegleria gruberi]
Length = 284
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 15/232 (6%)
Query: 182 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 241
+S+ L L LD+ S++ N G + L+ LN+ + + I +L+ L +
Sbjct: 57 KSISDLKNLTTLDIGYSRIGNEGLESIGQLENLTRLNIRSNNIGLVEPIINLKTLTALDI 116
Query: 242 TIDSILEGNENKAPLAKISLAGTTF-----INEREAFLYIETSLLSFLDVSNSSLSRFC- 295
+SI GNE ++K++ + F INE A E L+ LD++ S++
Sbjct: 117 GENSI--GNEGVKSISKLTELTSLFIDYDDINEEGAKYLCELPNLTILDLTGSNIGDEGA 174
Query: 296 -FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 354
F+ Q L+HL LS + I + V ++ + L +L LS G+ L+ L L
Sbjct: 175 KFIGQSTKLKHLFLSLADISNVGVNYLSSLNE-LVDLILSLNDIGDEGLKHLS-SLKMLN 232
Query: 355 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVL 402
L++SG QI D + ++ M +LK I I+N + + IQ++ TDL L
Sbjct: 233 YLNVSGNQITDEGVVFIREMENLKRISITNNLLTAVGENLIQEMSITTDLDL 284
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L+ L++ ++++ + +K L LD+ + IG++ V+ ++ + L +L + +
Sbjct: 89 LTRLNIRSNNIGLVEPIINLKTLTALDIGENSIGNEGVKSISKL-TELTSLFIDYDDINE 147
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G L LPNL IL L+G+ I D ++ LK + +S DI VG
Sbjct: 148 EGAKYLC-ELPNLTILDLTGSNIGDEGAKFIGQSTKLKHLFLSLADI----SNVG----- 197
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+ L +LN L L L + D L LS+ K L +L++ +TD + + +
Sbjct: 198 ---VNYLSSLNELVDLILSLNDIGDEGLKHLSSLKMLNYLNVSGNQITDEGVVFIREMEN 254
Query: 461 LTNLSIRDAVLTNSG 475
L +SI + +LT G
Sbjct: 255 LKRISITNNLLTAVG 269
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G + + E + +G L LN+ R + + + L LD+ + + G+
Sbjct: 71 GYSRIGNEGLESIGQLENLTRLNI---RSNNIGLVEPIINLKTLTALDIGEN-SIGNEGV 126
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + ++ L L++ + +G L L NL++LDL G + D + + TKL++L
Sbjct: 127 KSISKLTELTSLFIDYDDINEEGAKYLCELPNLTILDLTGSNIGDEGAKFIGQSTKLKHL 186
Query: 194 DLWGSQVSNRGAAVLKMFPRLS--FLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE 251
L + +SN G L L L+L G L ++SSL+ LN N + GN+
Sbjct: 187 FLSLADISNVGVNYLSSLNELVDLILSLNDIGDEGLKHLSSLKMLNYLNVS------GNQ 240
Query: 252 NKAPLAKISLAGTTFINERE 271
I+ G FI E E
Sbjct: 241 -------ITDEGVVFIREME 253
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
GENS+ E + + L SL + D + L + L LDL+ + D G
Sbjct: 117 GENSIGNEGVKSISKLTELTSLFI-DYDDINEEGAKYLCELPNLTILDLTGS-NIGDEGA 174
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
K + + L+ L+LS ++ G+ LSSL L L L + D L+ L L L YL
Sbjct: 175 KFIGQSTKLKHLFLSLADISNVGVNYLSSLNELVDLILSLNDIGDEGLKHLSSLKMLNYL 234
Query: 194 DLWGSQVSNRGAAVLK---MFPRLSFLNLAWTGV 224
++ G+Q+++ G ++ R+S N T V
Sbjct: 235 NVSGNQITDEGVVFIREMENLKRISITNNLLTAV 268
>gi|196035360|ref|ZP_03102765.1| putative internalin [Bacillus cereus W]
gi|195992037|gb|EDX56000.1| putative internalin [Bacillus cereus W]
Length = 765
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 383
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 432
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
>gi|404412528|ref|YP_006698115.1| internalin A [Listeria monocytogenes SLCC7179]
gi|298360000|gb|ADI77579.1| internalin A [Listeria monocytogenes]
gi|298360676|gb|ADI77917.1| internalin A [Listeria monocytogenes]
gi|404238227|emb|CBY59628.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC7179]
gi|443428842|gb|AGC92220.1| internalin A [Listeria monocytogenes]
gi|443428848|gb|AGC92223.1| internalin A [Listeria monocytogenes]
gi|443428858|gb|AGC92228.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|294358395|gb|ADE73850.1| InlA [Listeria monocytogenes]
Length = 800
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|313485072|gb|ADR53007.1| InlA [Listeria monocytogenes]
Length = 800
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|290976088|ref|XP_002670773.1| predicted protein [Naegleria gruberi]
gi|284084335|gb|EFC38029.1| predicted protein [Naegleria gruberi]
Length = 681
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 23/248 (9%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLS----RCVKV-TDAGMKHLL 137
++ + + L+ LNV+ R + ++ + M L LD+S +C+ V +GM++L
Sbjct: 430 ISVISQMKQLKELNVSG-NRFSFESVCKIKDMKQLTILDMSYTKLKCLDVEVVSGMRNLT 488
Query: 138 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 197
S L +++ L G L++ L L L +G + D + S+ + L LD+
Sbjct: 489 S------LRINDNDLGIQGAELIAQLDQLRELFIGSNNIGDEGMYSISHMKNLTKLDVSS 542
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNEN 252
+ + GA + L+F+N+ + G + + L L ++NC I G +
Sbjct: 543 NGIGEEGANSISQLKGLTFINVGFNLIGQQGAESIGELEQLTTLLINNCEIGPT--GAKF 600
Query: 253 KAPLAKISLAGTTF--INEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDL 308
+ + +++ + I + A E LS L V+N+ ++ +TQMK L+ LD+
Sbjct: 601 ISKMQRVTELDISLNDIQDEGAHYISELEKLSILYVNNNEITDEGLKAITQMKNLQLLDV 660
Query: 309 SSSMIGDD 316
S + I D+
Sbjct: 661 SGNKISDE 668
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 123/298 (41%), Gaps = 52/298 (17%)
Query: 176 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 235
++D + + + +L+ L++ G++ S +K +L+ L++++T L+C
Sbjct: 425 ISDREISVISQMKQLKELNVSGNRFSFESVCKIKDMKQLTILDMSYT---------KLKC 475
Query: 236 LNLSNCTIDSILEGNENKAPL----AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
L++ ++ G N L + + G I + + + F+ +N
Sbjct: 476 LDVE------VVSGMRNLTSLRINDNDLGIQGAELIAQLDQLREL------FIGSNNIGD 523
Query: 292 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GH 349
++ MK L LD+SS+ IG++ ++ L+ L N F+ G G
Sbjct: 524 EGMYSISHMKNLTKLDVSSNGIGEEGANSIS----QLKGLTFINVGFNLIGQQGAESIGE 579
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 409
L L L ++ +I ++S M + +DIS D IQ GA +
Sbjct: 580 LEQLTTLLINNCEIGPTGAKFISKMQRVTELDISLND----IQDEGAH--------YISE 627
Query: 410 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS-SLSKLTNLSI 466
L L L + +++D L ++ ++N L DVS +++S SK TN I
Sbjct: 628 LEKLSILYVNNNEITDEGLKAIT--------QMKNLQLLDVSGNKISDEFSKQTNTDI 677
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 132/285 (46%), Gaps = 36/285 (12%)
Query: 117 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 176
L+ L + C K++D + + + L++L +S + + + + ++ L++LD+ +
Sbjct: 415 LRRLHVVFC-KISDREISVISQMKQLKELNVSGNRFSFESVCKIKDMKQLTILDMSYTKL 473
Query: 177 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNIS 231
L + + + L L + + + +GA ++ +L L N+ G+ + ++
Sbjct: 474 KCLDVEVVSGMRNLTSLRINDNDLGIQGAELIAQLDQLRELFIGSNNIGDEGMYSISHMK 533
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN-------EREAFLYIETSLLSFL 284
+L L++S+ I G E +++ L G TFIN ++ A E L+ L
Sbjct: 534 NLTKLDVSSNGI-----GEEGANSISQ--LKGLTFINVGFNLIGQQGAESIGELEQLTTL 586
Query: 285 DVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
++N + + F+++M+ + LD+S + I D+ ++ + L L ++N + G
Sbjct: 587 LINNCEIGPTGAKFISKMQRVTELDISLNDIQDEGAHYISEL-EKLSILYVNNNEITDEG 645
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
+ + + NL++L +SG +I D +F +NTDI
Sbjct: 646 LKAIT-QMKNLQLLDVSGNKISD------------EFSKQTNTDI 677
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G N + + +G L +L + +C + A + ++ M + ELD+S + D G
Sbjct: 565 GFNLIGQQGAESIGELEQLTTLLINNCEIGPTGAKF-ISKMQRVTELDIS-LNDIQDEGA 622
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 178
++ + L L+++ +T +G+ ++ ++NL +LD+ G ++D
Sbjct: 623 HYISELEKLSILYVNNNEITDEGLKAITQMKNLQLLDVSGNKISD 667
>gi|150371828|dbj|BAF65703.1| internalin A [Listeria monocytogenes]
Length = 526
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|242347124|gb|ACS92628.1| toll-like receptor 2 type 2 [Anas platyrhynchos]
Length = 783
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 29/261 (11%)
Query: 222 TGVTKLPNISSLE---CLNLSNCTIDSILEGNENKA----PLAKISLAGTTFINEREAFL 274
T + K+P + +E C L D ++ N++++ + K+S+ + +A L
Sbjct: 272 TILEKVPRLVEVEMKDCRLLGTGRWDLEIQANQSQSLRVLTIEKLSIEEFYLFTDLQAVL 331
Query: 275 YIETSLLSFLDVSNSSLSRF-CFLT-QMKALEHLDLSSSMIGDDSVEMVACVGAN--LRN 330
+ SL + + V N+ + C L+ Q+ +LE+LDLS++++GD S+E AC G L+
Sbjct: 332 DL-VSLFTKITVENTKVFLVPCRLSKQLLSLEYLDLSANLLGDQSLEHSACPGGWPLLKT 390
Query: 331 LNLSNTRFSSAGVGILA-GHLPNLEILSLSGTQIDDYAISYMSMMPS-LKFIDISNTDIK 388
LNLS S + + HL NL +L +S + I + P+ LK++++S T I
Sbjct: 391 LNLSQNSLSDFKMTAKSLSHLRNLILLDISQNNFGE--IPDVCEWPANLKYLNLSRTQIP 448
Query: 389 GFIQQVGAETDLV-LSLTALQNLN----HLERLNLEQTQVS---DATLFPLSTFKELIHL 440
+ + +++ +S L+ N L+ L L + Q+ DA P L+ L
Sbjct: 449 KLTACIPSTLEVLDISANNLKEFNLHLPFLKELYLAKNQLKALPDAASIP-----NLVAL 503
Query: 441 SLRNASLTDVSLHQLSSLSKL 461
S+R L S +L S K+
Sbjct: 504 SIRGNKLNSFSKEELESFKKM 524
>gi|130774825|gb|ABO32425.1| InlA [Listeria monocytogenes]
Length = 800
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|340052077|emb|CBY84390.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|294358401|gb|ADE73853.1| InlA [Listeria monocytogenes]
Length = 800
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLAGLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLAGLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|254726170|ref|ZP_05187952.1| putative internalin [Bacillus anthracis str. A1055]
Length = 682
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 142 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 194
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 195 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 251
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 252 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 300
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 301 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 349
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 350 --PLSSLVNLQKLDLE 363
>gi|167861940|gb|ACA05669.1| InlA [Listeria monocytogenes]
gi|167861954|gb|ACA05676.1| InlA [Listeria monocytogenes]
gi|194239400|emb|CAQ76840.1| internalin A [Listeria monocytogenes]
gi|298360640|gb|ADI77899.1| truncated internalin A [Listeria monocytogenes]
gi|298360688|gb|ADI77923.1| truncated internalin A [Listeria monocytogenes]
gi|443428860|gb|AGC92229.1| truncated internalin A [Listeria monocytogenes]
gi|443428878|gb|AGC92238.1| truncated internalin A [Listeria monocytogenes]
Length = 684
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|145687803|gb|ABP88874.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687809|gb|ABP88877.1| truncated internalin A precursor [Listeria monocytogenes]
gi|194326155|emb|CAQ77236.1| internalin A [Listeria monocytogenes]
gi|294358379|gb|ADE73842.1| truncated InlA [Listeria monocytogenes]
gi|294358381|gb|ADE73843.1| truncated InlA [Listeria monocytogenes]
gi|294358383|gb|ADE73844.1| truncated InlA [Listeria monocytogenes]
gi|294358385|gb|ADE73845.1| truncated InlA [Listeria monocytogenes]
gi|298359890|gb|ADI77524.1| truncated internalin A [Listeria monocytogenes]
gi|298359938|gb|ADI77548.1| truncated internalin A [Listeria monocytogenes]
gi|298359960|gb|ADI77559.1| truncated internalin A [Listeria monocytogenes]
gi|298360012|gb|ADI77585.1| truncated internalin A [Listeria monocytogenes]
gi|371942072|gb|AEX60848.1| truncated internaline [Listeria monocytogenes]
gi|371942094|gb|AEX60859.1| truncated internaline [Listeria monocytogenes]
gi|371942120|gb|AEX60872.1| truncated internaline [Listeria monocytogenes]
gi|371942130|gb|AEX60877.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|229120968|ref|ZP_04250210.1| Internalin [Bacillus cereus 95/8201]
gi|228662628|gb|EEL18226.1| Internalin [Bacillus cereus 95/8201]
Length = 771
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|371942086|gb|AEX60855.1| truncated internaline [Listeria monocytogenes]
gi|371942128|gb|AEX60876.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698886|gb|ACN19164.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIGDI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|371942108|gb|AEX60866.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|228926459|ref|ZP_04089531.1| Internalin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228833283|gb|EEM78848.1| Internalin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 771
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|423579623|ref|ZP_17555734.1| hypothetical protein IIA_01138 [Bacillus cereus VD014]
gi|401218085|gb|EJR24770.1| hypothetical protein IIA_01138 [Bacillus cereus VD014]
Length = 760
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNYLALRGNEFA---D 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 433
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L +L L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNYLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGL 476
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|229183622|ref|ZP_04310845.1| Internalin [Bacillus cereus BGSC 6E1]
gi|228599865|gb|EEK57462.1| Internalin [Bacillus cereus BGSC 6E1]
Length = 771
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|196034771|ref|ZP_03102179.1| internalin protein [Bacillus cereus W]
gi|195992814|gb|EDX56774.1| internalin protein [Bacillus cereus W]
Length = 984
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 227 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 233 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 292
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 293 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 347
Query: 345 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 348 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 390
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 391 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 436
>gi|49480077|ref|YP_035555.1| internalin [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49331633|gb|AAT62279.1| internalin [Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 765
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|218901747|ref|YP_002449581.1| internalin protein [Bacillus cereus AH820]
gi|218535468|gb|ACK87866.1| internalin protein [Bacillus cereus AH820]
Length = 1012
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 227 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 284
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 233 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 292
Query: 285 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 344
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 293 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 347
Query: 345 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 402
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 348 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 390
Query: 403 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 391 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 436
>gi|423552836|ref|ZP_17529163.1| hypothetical protein IGW_03467 [Bacillus cereus ISP3191]
gi|401185449|gb|EJQ92543.1| hypothetical protein IGW_03467 [Bacillus cereus ISP3191]
Length = 765
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 383
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 432
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
>gi|356566696|ref|XP_003551566.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Glycine max]
Length = 1188
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 24/289 (8%)
Query: 140 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 199
S L+ L +S T + GI +++L LS+LDL + S+ L +L YLDL +
Sbjct: 362 SPLQTLIVSGTNFSG-GIPPINNLGQLSILDLSNCHFNGTLPSSMSRLRELTYLDLSFND 420
Query: 200 VSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKA 254
+ + + L M L+ L+ G T + +L ++L + +D L +
Sbjct: 421 FTGQIPS-LNMSKNLTHLDFTRNGFTGSITYHFGGLRNLLQIDLQDNFLDGSLPSSLFSL 479
Query: 255 PLAK-ISLAGTTFINEREAFLYIETSLLSFLDVS----NSSLSRFCFLTQMKALEHLDLS 309
PL + I L+ F ++ + I +S L LD+S N S+ F Q+++L L+LS
Sbjct: 480 PLLRSIRLSNNNFQDQLNKYSNISSSKLEVLDLSGNDLNGSIPTDIF--QLRSLSVLELS 537
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFS----SAGVGILAGHLPNLEILSLSGTQIDD 365
S+ + V NL L LS+ S A VG+++ +PN++I+ L+ + +
Sbjct: 538 SNKLNGTLKLDVIHRLENLTTLGLSHNHLSIDTNFADVGLISS-IPNMKIVELASCNLTE 596
Query: 366 YAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNL 410
+ S++ + +D+S+ +I+G +I Q+ + L LS L NL
Sbjct: 597 FP-SFLRNQSKITTLDLSSNNIQGSIPTWIWQLNSLVQLNLSHNLLSNL 644
>gi|319881517|gb|ADV75085.1| TLR2B [Oceanodroma leucorhoa]
Length = 397
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 279 SLLSFLDVSNSSLSRF-CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS 334
SLL+ + V N+ + C L+Q + +LE+LDLS++++GD S+E AC G +L+ LNLS
Sbjct: 97 SLLTKVTVENTKVFLVPCRLSQKLLSLEYLDLSANLLGDQSLEHSACQGGWPSLQTLNLS 156
Query: 335 NTRFSSAGVGILA-GHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQ 392
S + + + HL NL +L +S D I + P +LK++++S+T I
Sbjct: 157 QNSLSDLEMTVKSLSHLRNLILLDISQNNFGD--IPDVCEWPQTLKYLNLSSTQIPKLTT 214
Query: 393 QVGAETDLVLSLTA-------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
+ + VL ++A LQ L +L+ L L + Q+ L + L+ +S+R
Sbjct: 215 CIPPTLE-VLDVSANNLKEFGLQ-LPYLKELYLAKNQLK--ALPGAAPVPNLVAMSIRRN 270
Query: 446 SLTDVSLHQLSSLSKLTNLSIRD 468
L S + S K+ L D
Sbjct: 271 KLNGFSREEFESFRKMELLDASD 293
>gi|228945027|ref|ZP_04107388.1| Internalin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228814696|gb|EEM60956.1| Internalin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 771
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|328786015|ref|XP_394034.4| PREDICTED: slit homolog 1 protein-like [Apis mellifera]
Length = 1071
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 209/498 (41%), Gaps = 73/498 (14%)
Query: 81 EWMAYLGAFRYLRSLNVADC--RRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS 138
E ++LG R L+ L+V + + AL L ++ L + R + +
Sbjct: 111 EEHSFLGVNRTLQELHVINSILEKFPHEALQILGNLSILS-ITGHRISTLPANSFAESAA 169
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
+ +EKL +S L++ + L+ L+ L LD+ G + +L + L EYLDL +
Sbjct: 170 AAKIEKLEISNGTLSSLPVEALAPLKKLKRLDMHGNKIKELKRNQFKGLRDTEYLDLSHN 229
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENK 253
+S + L ++ + N++ + L S L+ LNLS+ I L+ N +
Sbjct: 230 LISKLDGSHLADLTKMGWCNMSHNAIADLKRGTFARNSLLKVLNLSHNKIRK-LDSNTFR 288
Query: 254 AP--LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLS 309
L ++ L+ IN+ + + + +D++ + + + F Q++ E LD+S
Sbjct: 289 GMRFLIRLYLSDNQ-INDVGRGTFGPVTRIGTIDLARNFIKKIDFQMFNQLQFAELLDVS 347
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD---- 365
+ + VE ++ L ++LS S G + N+ +L LS ++++
Sbjct: 348 ENFVT--VVEKLSFKDLYLTRIDLSRNEISKIEPGAFENCV-NITLLDLSHNKLENISKY 404
Query: 366 ------YA----ISYMSM----------MPSLKFIDISNTDIKGFIQQVGAE------TD 399
YA +SY + M LK +++SN I +Q + D
Sbjct: 405 SFDSATYATELQLSYNQLTSLNQVPLHNMTGLKVLNVSNNLIHSVPRQTFPKLYELHTID 464
Query: 400 LV------LSLTALQNLNHLERLNLEQT---QVSDATLFPLSTFKELIHLSLRNASLTDV 450
L + Q L L LNL ++ +T PL+T L+ L + LTDV
Sbjct: 465 LSHNNLSEIHNAVFQTLFSLRSLNLSYNSLERIKPSTFGPLAT---LLELDMSYNRLTDV 521
Query: 451 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPR 510
+ L+ L +L++R+ LT F+ P SL LD +E+++ + P
Sbjct: 522 ARSSLTRLPSCRSLTVRNNRLTK----IFQLPISLASLD------FSENSLEEI----PT 567
Query: 511 IEVWHELSVICPSDQIGS 528
++VW ++ + D G+
Sbjct: 568 VDVWPTMNALLSLDLTGN 585
>gi|222616161|gb|EEE52293.1| hypothetical protein OsJ_34286 [Oryza sativa Japonica Group]
Length = 1561
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 136 LLSISTLEKLWLSETGLTA-DG--IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
LLS+ L+ L LS L+ DG + S +NL L+L G+P +V L L+KL++
Sbjct: 105 LLSLEHLQHLDLSWNNLSGSDGHIPGFIGSFRNLRYLNLSGMPFIGVVPPQLGNLSKLQF 164
Query: 193 LDL---WGSQVSNR-GAAVLKMFPRLSFLNLAWTGVTKLPN-------ISSLECLNLSNC 241
LDL G ++ +R G L+ P L +LNL ++ + N + SL LNLSNC
Sbjct: 165 LDLSSCIGLEMQSRSGMTWLRNIPLLQYLNLNSVDLSAVDNWLHVMNQLPSLRVLNLSNC 224
Query: 242 TI----DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-- 295
++ + + N L ++ L+G F + + + + L L +S + L
Sbjct: 225 SLQRADQKLTHLHNNFTRLERLDLSGNQFNHPAASCWFWNITSLKDLILSGNRLYGQLPD 284
Query: 296 FLTQMKALEHLDLS--------------------SSMIGDDSVEMVACVGANLRNL 331
L M +L+ LD S SS D ++E + + NLRNL
Sbjct: 285 ALADMTSLQVLDFSINRPVPISPIGLLPSSQAPPSSGDDDAAIEGITIMAENLRNL 340
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
S+L L LS+ LT + + L+NL+ +DL + L + +LT L Y+DL +
Sbjct: 393 FSSLVYLDLSQNYLTGQLPSEIGMLRNLTWMDLSYNGLVHLP-PEIGMLTNLAYIDLGHN 451
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSNCTIDSILEGN-- 250
S+ + + M L +L+L++ + +++SLE + L +++ +++
Sbjct: 452 NFSHLPSEI-GMLSNLGYLDLSFNNLDGVITEKHFAHLASLESIYLPYNSLEIVVDPEWL 510
Query: 251 -----------------------ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+ + + ++ +A T+ + + + S ++LD+S
Sbjct: 511 PPFRLKYAYFYCCQMGPMFPKWLQTQVDIIELDIANTSIKDTFPEWFWTTVSKATYLDIS 570
Query: 288 NSSLSRFCFLTQMKA--LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
N+ + R T M+ LE L S++I + E+ NL L++SN S G
Sbjct: 571 NNQI-RGGLPTNMETMLLETFYLDSNLITGEIPELP----INLETLDISNNYLS----GP 621
Query: 346 LAGHL--PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
L ++ PNL L+L QI + Y+ + +L+ +D+ N +G
Sbjct: 622 LPSNIGAPNLAHLNLYSNQISGHIPGYLCNLGALEALDLGNNRFEG 667
>gi|168185063|ref|ZP_02619727.1| ABC transporter permease protein [Clostridium botulinum Bf]
gi|182671889|gb|EDT83850.1| ABC transporter permease protein [Clostridium botulinum Bf]
Length = 1355
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 178/410 (43%), Gaps = 65/410 (15%)
Query: 112 TGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 171
T + +KELD G++++ + LEKL LS T + I+LL L NL +++
Sbjct: 352 TDLENIKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKCLINLKEVNI 406
Query: 172 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 231
++D+ +L+ + YL+L + V+ V++ F + L ++ T + +P +S
Sbjct: 407 SNTSISDIT--ALKNSIYIRYLNLNETNVT--TLQVIEKFQYIERLYVSGTKINTVPQLS 462
Query: 232 SLECLNLSNCTIDSI-----LEG----NENKAPLAKISLAGTTFINEREAFLYIETSLLS 282
SL L+LSNC I+ I L N +K L +F++ E L
Sbjct: 463 SLLELDLSNCNINDISFINYLHNLTYLNVDKLKYKSNILGNISFVSSLEK--------LE 514
Query: 283 FLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLS------N 335
+L ++N+ + L + L LD++ + I + V +G + N
Sbjct: 515 YLSIANTDVVNIDVLKNLINLRKLDITGCAQINTQVLNHVEIIGNEIVNFGDKVLEREIR 574
Query: 336 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQ 393
++ I L ++ L LSG I D + + M +L ++D+SN +I I++
Sbjct: 575 ELINNYSEPIYKRQLSSITKLELSGRGIVD--LQGLESMENLTYLDLSNNEISNIDSIKK 632
Query: 394 VGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
+ LVL S+ ++++L +LE L+L + D T L +L L L +
Sbjct: 633 LANLKKLVLHKNKIGSIKSIESLKYLEELDLSNNLIGDIT--ALGGLSQLTRLDLSRNGI 690
Query: 448 TDVSLHQLSSLSKLTNL------------------SIRDAVLTNSGLGSF 479
VS++ L SL L L S+R+ L NSG+ +F
Sbjct: 691 --VSINSLGSLINLQYLSLYENKISEGEEYLKKLYSLRELYLKNSGVSNF 738
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R + ++L+ + +T L+ L L+
Sbjct: 829 NLHSINLRGHGKL--EGLENLIPIRGLIKLDLQ-GREINYTSLYYIKYLTSLRYLYLNNM 885
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++L L+NLS L LGG + D L SL+
Sbjct: 886 NLTGD--LSFLENLTDLRILDLSRTGIS--NISILDKLRNLSELYLGGNNIID--LSSLE 939
Query: 186 VLTKLEYLDLWGSQVSNRGAA---VLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL V N L+ L +L L T K+ + S++
Sbjct: 940 NLTNLVKLDL----VENNDITSIYALRNLINLRYLTLPITNPKKIQDYSAV 986
>gi|125547014|gb|EAY92836.1| hypothetical protein OsI_14636 [Oryza sativa Indica Group]
Length = 668
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 54/334 (16%)
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW-GSQV 200
L +L G +SSL+NL L+ G+P+T +V L LTKL+YLDL G +
Sbjct: 122 LSNNYLVVVGPAGQFPGFISSLRNLIYLNFSGMPLTGMVPPQLGNLTKLQYLDLSDGIDM 181
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKL---PNI----SSLECLNLSNC----TIDSILEG 249
+ L P L +L+L+ ++++ P++ +L L L +C I SI++
Sbjct: 182 YSTDIQWLTHLPSLRYLSLSNVNLSRISDWPHVMNMNVNLRALYLCDCFLTSAIQSIVQL 241
Query: 250 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLD 307
N + L ++ L+ F + + L +LD+S +++ S +++ +L+ LD
Sbjct: 242 NFTR--LEELDLSQNNFHQPLAYCWFWNLTSLKYLDLSGNNIVGSLPAAVSKFTSLDTLD 299
Query: 308 LS-------------------------SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 342
LS +++ G+ + + +A + + L+ ++LS+ ++
Sbjct: 300 LSENQFFGCIPYEISMLTSLTRINLRVNNLTGEITEKHLAGLKS-LKTIDLSSNQYLKIV 358
Query: 343 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-----FIQQVGAE 397
VG LE+ Q+ S++ M +K +DIS+T I F
Sbjct: 359 VGPEWQPPFRLEVAIFGSCQLGPMFPSWLQWMVDIKELDISSTGITDQLPHWFWTTFSKA 418
Query: 398 TDLVL-------SLTALQNLNHLERLNLEQTQVS 424
TDLV+ SL A LERL L Q++
Sbjct: 419 TDLVISSNNISGSLPANMETMSLERLYLGYNQIT 452
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 156/387 (40%), Gaps = 40/387 (10%)
Query: 77 SVDAEWMAYLGAFRYLRSLNVADCRRVTSSALW--ALTGMTCLKELDLSRCVKVTDAGMK 134
S D +W+ +L + RYL SL+ + R++ W + L+ L L C +
Sbjct: 183 STDIQWLTHLPSLRYL-SLSNVNLSRISD---WPHVMNMNVNLRALYLCDCFLTSAIQSI 238
Query: 135 HLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
L+ + LE+L LS+ +L +L LDL G + + ++ T L+ L
Sbjct: 239 VQLNFTRLEELDLSQNNFHQPLAYCWFWNLTSLKYLDLSGNNIVGSLPAAVSKFTSLDTL 298
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT------KLPNISSLECLNLSNCTIDSIL 247
DL +Q + M L+ +NL +T L + SL+ ++LS+ I+
Sbjct: 299 DLSENQFFGCIPYEISMLTSLTRINLRVNNLTGEITEKHLAGLKSLKTIDLSSNQYLKIV 358
Query: 248 EGNENKAPLA-KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS---RFCFLTQMKAL 303
G E + P ++++ G+ + + LD+S++ ++ F T
Sbjct: 359 VGPEWQPPFRLEVAIFGSCQLGPMFPSWLQWMVDIKELDISSTGITDQLPHWFWTTFSKA 418
Query: 304 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-GILAGHLPNLEILSLSGTQ 362
L +SS+ I + AN+ ++L + G++ PNL L +
Sbjct: 419 TDLVISSNNIS-------GSLPANMETMSLERLYLGYNQITGVIPILPPNLTYLEIQNNM 471
Query: 363 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
+ S P+L ++D+S+ +IKG I E L +L LNL
Sbjct: 472 VSGIVASKTFGAPNLGYMDLSSNNIKGPIAGSICE------------LQYLTYLNLANNH 519
Query: 423 VSDATLFPLST-FKELIHLSLRNASLT 448
+ FP E+ H L+N SL+
Sbjct: 520 LEGE--FPHCIGMTEVQHFILKNNSLS 544
>gi|118476901|ref|YP_894052.1| internalin [Bacillus thuringiensis str. Al Hakam]
gi|118416126|gb|ABK84545.1| internalin [Bacillus thuringiensis str. Al Hakam]
Length = 777
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|219821333|gb|ACL37800.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDINPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 INPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|163939236|ref|YP_001644120.1| NEAr transporter [Bacillus weihenstephanensis KBAB4]
gi|163861433|gb|ABY42492.1| NEAr transporter [Bacillus weihenstephanensis KBAB4]
Length = 766
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 31/267 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRD 468
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRD 475
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|167861934|gb|ACA05666.1| InlA [Listeria monocytogenes]
gi|194326141|emb|CAQ77229.1| internalin A [Listeria monocytogenes]
Length = 538
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|30261431|ref|NP_843808.1| internalin, partial [Bacillus anthracis str. Ames]
gi|49184263|ref|YP_027515.1| internalin, partial [Bacillus anthracis str. Sterne]
gi|254682509|ref|ZP_05146370.1| internalin, putative [Bacillus anthracis str. CNEVA-9066]
gi|254733925|ref|ZP_05191639.1| internalin, putative [Bacillus anthracis str. Western North America
USA6153]
gi|254740385|ref|ZP_05198076.1| internalin, putative [Bacillus anthracis str. Kruger B]
gi|254753775|ref|ZP_05205810.1| internalin, putative [Bacillus anthracis str. Vollum]
gi|254758872|ref|ZP_05210899.1| internalin, putative [Bacillus anthracis str. Australia 94]
gi|386735134|ref|YP_006208315.1| Internalin [Bacillus anthracis str. H9401]
gi|421507112|ref|ZP_15954033.1| internalin [Bacillus anthracis str. UR-1]
gi|421637928|ref|ZP_16078525.1| internalin [Bacillus anthracis str. BF1]
gi|30255285|gb|AAP25294.1| putative internalin [Bacillus anthracis str. Ames]
gi|49178190|gb|AAT53566.1| internalin, putative [Bacillus anthracis str. Sterne]
gi|384384986|gb|AFH82647.1| Internalin [Bacillus anthracis str. H9401]
gi|401822764|gb|EJT21913.1| internalin [Bacillus anthracis str. UR-1]
gi|403395487|gb|EJY92726.1| internalin [Bacillus anthracis str. BF1]
Length = 542
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 2 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 54
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 55 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 111
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 112 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 160
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 161 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 209
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 210 --PLSSLVNLQKLDLE 223
>gi|223698664|gb|ACN19016.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|148607496|gb|ABQ95524.1| InlA [Listeria monocytogenes]
Length = 730
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|229132224|ref|ZP_04261081.1| Internalin [Bacillus cereus BDRD-ST196]
gi|228651272|gb|EEL07250.1| Internalin [Bacillus cereus BDRD-ST196]
Length = 766
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 31/267 (11%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 386
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 446
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 447 LTDVSLHQLSSLSKLTNLS-----IRD 468
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRD 475
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLT 472
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|167862030|gb|ACA05714.1| InlA [Listeria monocytogenes]
Length = 576
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 152/325 (46%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNHITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 268
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 269 --LASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698658|gb|ACN19012.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|228932710|ref|ZP_04095583.1| Internalin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228826968|gb|EEM72729.1| Internalin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
Length = 760
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 220 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 272
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 273 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 329
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 330 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 378
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 379 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 427
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 428 --PLSSLVNLQKLDLE 441
>gi|297721063|ref|NP_001172894.1| Os02g0274200 [Oryza sativa Japonica Group]
gi|255670791|dbj|BAH91623.1| Os02g0274200 [Oryza sativa Japonica Group]
Length = 910
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 131/316 (41%), Gaps = 57/316 (18%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W + LR L ++DC + + A +T L++LDLS V T + + T
Sbjct: 212 WAGVVSNLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLSTNVINTSSANSWFWDVPT 271
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L L LS L+ L ++ NL VL+L G + ++ +LQ L L+ +DL + V+
Sbjct: 272 LTYLDLSGNALSGVFPDALGNMTNLRVLNLQGNDMVGMIPATLQRLCGLQVVDLTVNSVN 331
Query: 202 NRGAAVLKMFPR----------LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE 251
A ++ PR LS +N++ + +S L L+LS +
Sbjct: 332 GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIGEMSELTILDLSFNKL-------S 384
Query: 252 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 311
+ PL SL+ T L++ +LL N SLS F + +LE +DLS
Sbjct: 385 GEIPLGIGSLSNLT-------RLFLHNNLL------NGSLSEEHF-ADLVSLEWIDLS-- 428
Query: 312 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 371
L NL++ ++ + P++ Q+ + +++
Sbjct: 429 ----------------LNNLSMEIKPSWKPPCKLVYAYFPDV--------QMGPHFPAWI 464
Query: 372 SMMPSLKFIDISNTDI 387
PS+K++DISN I
Sbjct: 465 KHQPSIKYLDISNAGI 480
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 153/362 (42%), Gaps = 59/362 (16%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGM------KHLLSISTLEKLWLSETGLTADGIALLSSL 163
+L G+ L LDLS+ + G+ + L S+ L L LS TGL + L +L
Sbjct: 108 SLLGLPRLAYLDLSQNNLIGGDGVSPSPLPRFLGSLCDLRYLNLSFTGLAGEIPPQLGNL 167
Query: 164 QNLSVLDL----GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L LDL GGL D+ L ++ LEYLD+ V N A+V
Sbjct: 168 TRLRQLDLSSNVGGLYSGDISW--LSGMSSLEYLDM---SVVNLNASV------------ 210
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYI- 276
W GV N+ SL L LS+C + + N L K+ L+ T IN A +
Sbjct: 211 GWAGVVS--NLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLS-TNVINTSSANSWFW 267
Query: 277 ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
+ L++LD+S ++LS L M L L+L G+D V M+ L L +
Sbjct: 268 DVPTLTYLDLSGNALSGVFPDALGNMTNLRVLNLQ----GNDMVGMIPATLQRLCGLQVV 323
Query: 335 NTRFSSAGVGILAG---HLP-----NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
+ +S G +A LP L++L LS + + ++ M L +D+S
Sbjct: 324 DLTVNSVN-GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIGEMSELTILDLSFNK 382
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
+ G ++ L + +L NL L NL +S+ L + E I LSL N
Sbjct: 383 LSG---------EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNL 432
Query: 446 SL 447
S+
Sbjct: 433 SM 434
>gi|223698643|gb|ACN19002.1| internalin A [Listeria monocytogenes]
gi|223698646|gb|ACN19004.1| internalin A [Listeria monocytogenes]
gi|223698670|gb|ACN19020.1| internalin A [Listeria monocytogenes]
gi|223698673|gb|ACN19022.1| internalin A [Listeria monocytogenes]
gi|223698718|gb|ACN19052.1| internalin A [Listeria monocytogenes]
gi|223698754|gb|ACN19076.1| internalin A [Listeria monocytogenes]
gi|223698757|gb|ACN19078.1| internalin A [Listeria monocytogenes]
gi|223698796|gb|ACN19104.1| internalin A [Listeria monocytogenes]
gi|223698826|gb|ACN19124.1| internalin A [Listeria monocytogenes]
gi|223698829|gb|ACN19126.1| internalin A [Listeria monocytogenes]
gi|223698832|gb|ACN19128.1| internalin A [Listeria monocytogenes]
gi|223698862|gb|ACN19148.1| internalin A [Listeria monocytogenes]
gi|223698895|gb|ACN19170.1| internalin A [Listeria monocytogenes]
gi|223698925|gb|ACN19190.1| internalin A [Listeria monocytogenes]
gi|223698928|gb|ACN19192.1| internalin A [Listeria monocytogenes]
gi|223698931|gb|ACN19194.1| internalin A [Listeria monocytogenes]
gi|223698934|gb|ACN19196.1| internalin A [Listeria monocytogenes]
gi|223698937|gb|ACN19198.1| internalin A [Listeria monocytogenes]
gi|223698940|gb|ACN19200.1| internalin A [Listeria monocytogenes]
gi|223698943|gb|ACN19202.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|298359722|gb|ADI77440.1| truncated internalin A [Listeria monocytogenes]
gi|298359752|gb|ADI77455.1| truncated internalin A [Listeria monocytogenes]
gi|298359762|gb|ADI77460.1| truncated internalin A [Listeria monocytogenes]
gi|298359812|gb|ADI77485.1| truncated internalin A [Listeria monocytogenes]
gi|298359814|gb|ADI77486.1| truncated internalin A [Listeria monocytogenes]
gi|298359858|gb|ADI77508.1| truncated internalin A [Listeria monocytogenes]
gi|298359886|gb|ADI77522.1| truncated internalin A [Listeria monocytogenes]
gi|298359900|gb|ADI77529.1| truncated internalin A [Listeria monocytogenes]
gi|298359906|gb|ADI77532.1| truncated internalin A [Listeria monocytogenes]
gi|298359912|gb|ADI77535.1| truncated internalin A [Listeria monocytogenes]
gi|298359944|gb|ADI77551.1| truncated internalin A [Listeria monocytogenes]
gi|298359980|gb|ADI77569.1| truncated internalin A [Listeria monocytogenes]
gi|298359990|gb|ADI77574.1| truncated internalin A [Listeria monocytogenes]
gi|298359992|gb|ADI77575.1| truncated internalin A [Listeria monocytogenes]
gi|298359994|gb|ADI77576.1| truncated internalin A [Listeria monocytogenes]
gi|298360008|gb|ADI77583.1| truncated internalin A [Listeria monocytogenes]
gi|298360026|gb|ADI77592.1| truncated internalin A [Listeria monocytogenes]
gi|298360060|gb|ADI77609.1| truncated internalin A [Listeria monocytogenes]
gi|298360078|gb|ADI77618.1| truncated internalin A [Listeria monocytogenes]
gi|298360082|gb|ADI77620.1| truncated internalin A [Listeria monocytogenes]
gi|298360096|gb|ADI77627.1| truncated internalin A [Listeria monocytogenes]
gi|298360142|gb|ADI77650.1| truncated internalin A [Listeria monocytogenes]
gi|298360144|gb|ADI77651.1| truncated internalin A [Listeria monocytogenes]
gi|298360146|gb|ADI77652.1| truncated internalin A [Listeria monocytogenes]
gi|298360160|gb|ADI77659.1| truncated internalin A [Listeria monocytogenes]
gi|298360192|gb|ADI77675.1| truncated internalin A [Listeria monocytogenes]
gi|298360252|gb|ADI77705.1| truncated internalin A [Listeria monocytogenes]
gi|298360274|gb|ADI77716.1| truncated internalin A [Listeria monocytogenes]
gi|298360276|gb|ADI77717.1| truncated internalin A [Listeria monocytogenes]
gi|298360296|gb|ADI77727.1| truncated internalin A [Listeria monocytogenes]
gi|298360304|gb|ADI77731.1| truncated internalin A [Listeria monocytogenes]
gi|298360316|gb|ADI77737.1| truncated internalin A [Listeria monocytogenes]
gi|298360320|gb|ADI77739.1| truncated internalin A [Listeria monocytogenes]
gi|298360336|gb|ADI77747.1| truncated internalin A [Listeria monocytogenes]
gi|298360342|gb|ADI77750.1| truncated internalin A [Listeria monocytogenes]
gi|298360348|gb|ADI77753.1| truncated internalin A [Listeria monocytogenes]
gi|298360374|gb|ADI77766.1| truncated internalin A [Listeria monocytogenes]
gi|298360380|gb|ADI77769.1| truncated internalin A [Listeria monocytogenes]
gi|298360404|gb|ADI77781.1| truncated internalin A [Listeria monocytogenes]
gi|298360414|gb|ADI77786.1| truncated internalin A [Listeria monocytogenes]
gi|298360426|gb|ADI77792.1| truncated internalin A [Listeria monocytogenes]
gi|298360458|gb|ADI77808.1| truncated internalin A [Listeria monocytogenes]
gi|298360464|gb|ADI77811.1| truncated internalin A [Listeria monocytogenes]
gi|298360488|gb|ADI77823.1| truncated internalin A [Listeria monocytogenes]
gi|298360492|gb|ADI77825.1| truncated internalin A [Listeria monocytogenes]
gi|298360518|gb|ADI77838.1| truncated internalin A [Listeria monocytogenes]
gi|298360538|gb|ADI77848.1| truncated internalin A [Listeria monocytogenes]
gi|298360562|gb|ADI77860.1| truncated internalin A [Listeria monocytogenes]
gi|298360594|gb|ADI77876.1| truncated internalin A [Listeria monocytogenes]
gi|298360616|gb|ADI77887.1| truncated internalin A [Listeria monocytogenes]
gi|298360654|gb|ADI77906.1| truncated internalin A [Listeria monocytogenes]
gi|298360660|gb|ADI77909.1| truncated internalin A [Listeria monocytogenes]
gi|298360668|gb|ADI77913.1| truncated internalin A [Listeria monocytogenes]
gi|298360690|gb|ADI77924.1| truncated internalin A [Listeria monocytogenes]
gi|298360696|gb|ADI77927.1| truncated internalin A [Listeria monocytogenes]
gi|298360720|gb|ADI77939.1| truncated internalin A [Listeria monocytogenes]
gi|443428784|gb|AGC92191.1| truncated internalin A [Listeria monocytogenes]
gi|443428786|gb|AGC92192.1| truncated internalin A [Listeria monocytogenes]
gi|443428790|gb|AGC92194.1| truncated internalin A [Listeria monocytogenes]
gi|443428794|gb|AGC92196.1| truncated internalin A [Listeria monocytogenes]
gi|443428808|gb|AGC92203.1| truncated internalin A [Listeria monocytogenes]
gi|443428810|gb|AGC92204.1| truncated internalin A [Listeria monocytogenes]
gi|443428828|gb|AGC92213.1| truncated internalin A [Listeria monocytogenes]
gi|443428866|gb|AGC92232.1| truncated internalin A [Listeria monocytogenes]
gi|443428874|gb|AGC92236.1| truncated internalin A [Listeria monocytogenes]
gi|443428876|gb|AGC92237.1| truncated internalin A [Listeria monocytogenes]
Length = 699
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|228914000|ref|ZP_04077622.1| Internalin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228845605|gb|EEM90634.1| Internalin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 779
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 239 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 291
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 292 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 348
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 349 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 397
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 398 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 446
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 447 --PLSSLVNLQKLDLE 460
>gi|218902536|ref|YP_002450370.1| putative internalin [Bacillus cereus AH820]
gi|218536306|gb|ACK88704.1| putative internalin [Bacillus cereus AH820]
Length = 779
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 239 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 291
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 292 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 348
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 349 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 397
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 398 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 446
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 447 --PLSSLVNLQKLDLE 460
>gi|158429242|pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 54/317 (17%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPR 213
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 57 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 111
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 112 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 155
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
LSF S++ ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 156 -------LSF---SSNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 202
Query: 334 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 203 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
Query: 393 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 314
Query: 445 ASLTDVSLHQLSSLSKL 461
+++D+S +SSL+KL
Sbjct: 315 NNISDIS--PVSSLTKL 329
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L S +VTD +K L +++TLE+L
Sbjct: 122 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSN-QVTD--LKPLANLTTLERL 178
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 179 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 233
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 234 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 263
>gi|356575411|ref|XP_003555835.1| PREDICTED: F-box/LRR-repeat protein 2-like [Glycine max]
Length = 418
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 166/358 (46%), Gaps = 40/358 (11%)
Query: 21 GESVQKWRR-QRRSLERLPAHLADSLLRHLIRRRLIFPSLLEVFKHNAEAIELRGENSV- 78
G ++W R Q ++L A +LR + R F L+E+ A+++ V
Sbjct: 44 GLVCKRWLRLQSTERKKLAARAGPHMLRKMADR---FTRLVEL--DLAQSVSRSFYPGVT 98
Query: 79 DAEWMAYLGAFRYLRSLNVADCRRVTSSALWAL-TGMTCLKELDLSRCVKVTDAGMKHLL 137
D++ AF L+ LN+ +C+ +T + + A+ ++ L+ LD+S C K+TD G+ +
Sbjct: 99 DSDLAVIATAFTCLKILNLHNCKGITDAGMKAIGEHLSLLQSLDVSYCRKLTDKGLSAVA 158
Query: 138 -SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGL-PVTDLVLRSLQV-LTKLEY 192
L L ++ DG+ AL + NL L L G +TD L +L ++ +
Sbjct: 159 KGCCDLRILHMAGCRFVTDGVLEALSKNCGNLEELGLHGCTSITDNGLINLASGCRRIRF 218
Query: 193 LDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE----CLNLSNCTIDSIL 247
LD+ S ++ G + + S L K+ + + L C NL I+
Sbjct: 219 LDINKCSNATDVGVSSVSRACSSSLKTLKLLDCYKIGDETILSLAEFCGNLET----LII 274
Query: 248 EGNENKAPLAKISLA---GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 304
G + + A SLA G++ N R + L++S+SSLS C L+Q + LE
Sbjct: 275 GGCRDVSADAIRSLAAACGSSLKNLRMDWC---------LNISDSSLS--CVLSQCRNLE 323
Query: 305 HLDLSSS-MIGDDSVEMVAC--VGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 358
LD+ + D + ++++ G +L+ L +SN + + AG+GI+ G +L+ L +
Sbjct: 324 ALDIGCCEELTDAAFQLLSNEEPGLSLKILKISNCPKITVAGIGIIVGKCTSLQYLDV 381
>gi|270003031|gb|EEZ99478.1| hypothetical protein TcasGA2_TC000052 [Tribolium castaneum]
Length = 389
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 92 LRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
LRSL+++ C R+T +AL + + L+EL L RCV +TD G+ ++ ++ +L L+L
Sbjct: 258 LRSLDLSWCPRITDAALEYIACDLNQLEELTLDRCVHITDIGIGYISTMLSLSALYLRWC 317
Query: 151 GLTAD-GIALLSSLQNLSVLDLGGLP 175
D G+ L ++NL +L L G P
Sbjct: 318 SQIRDFGLQHLCGMRNLQILSLAGCP 343
>gi|327272147|ref|XP_003220847.1| PREDICTED: f-box/LRR-repeat protein 14-like [Anolis carolinensis]
Length = 400
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 37/308 (12%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKHLL-SIST 141
A++ LR+LN++ C+++T S+L + + L+ L+L C +T+ G+ + +
Sbjct: 111 AFVAEISSLRALNLSLCKQITDSSLGRIAQYLKGLEALELGGCSNITNTGLLLVAWGLPR 170
Query: 142 LEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L+ L L +D GI L+ + + G L + L L+ Q L+ L L
Sbjct: 171 LKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLEQLTLQDCQKLSDLSLKHL----- 223
Query: 201 SNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 259
+RG + L+ LSF ++ G+ L ++S L LNL +C D+I + +
Sbjct: 224 -SRGLSRLRQL-NLSFCGGISDAGLLHLSHMSCLRVLNLRSC--DNISDTGIMHLATGSL 279
Query: 260 SLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQ-MKALEHLDLSSSMIGDDS 317
L+G +SF D V + SL+ ++ Q + L L L S I D+
Sbjct: 280 RLSGLD---------------VSFCDKVGDQSLA---YIAQGLDGLRSLSLCSCHISDEG 321
Query: 318 VEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMP 375
+ + LR LN+ R + G+ ++A HL L + L G T+I + ++ +P
Sbjct: 322 INRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLP 381
Query: 376 SLKFIDIS 383
LK +++
Sbjct: 382 CLKVLNLG 389
>gi|223698868|gb|ACN19152.1| internalin A [Listeria monocytogenes]
gi|223698898|gb|ACN19172.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|104647031|gb|ABF74139.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 169/373 (45%), Gaps = 49/373 (13%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DLSRC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ + P+ IS L CL ++S+C T+ S L L ++L G + L
Sbjct: 149 KIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGX---LVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKEL 437
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDL 379
Query: 438 IHLSLRNASLTDV 450
LSL N ++T++
Sbjct: 380 RALSLSNMNMTEI 392
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGXLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP N+ +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVI 337
>gi|229090382|ref|ZP_04221625.1| Internalin [Bacillus cereus Rock3-42]
gi|228692965|gb|EEL46683.1| Internalin [Bacillus cereus Rock3-42]
Length = 760
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 220 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 272
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 273 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 329
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 330 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 378
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 379 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 427
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 428 --PLSSLVNLQKLDLE 441
>gi|77551578|gb|ABA94375.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
Length = 1500
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 136 LLSISTLEKLWLSETGLTA-DG--IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
LLS+ L+ L LS L+ DG + S +NL L+L G+P +V L L+KL++
Sbjct: 105 LLSLEHLQHLDLSWNNLSGSDGHIPGFIGSFRNLRYLNLSGMPFIGVVPPQLGNLSKLQF 164
Query: 193 LDL---WGSQVSNR-GAAVLKMFPRLSFLNLAWTGVTKLPN-------ISSLECLNLSNC 241
LDL G ++ +R G L+ P L +LNL ++ + N + SL LNLSNC
Sbjct: 165 LDLSSCIGLEMQSRSGMTWLRNIPLLQYLNLNSVDLSAVDNWLHVMNQLPSLRVLNLSNC 224
Query: 242 TI----DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-- 295
++ + + N L ++ L+G F + + + + L L +S + L
Sbjct: 225 SLQRADQKLTHLHNNFTRLERLDLSGNQFNHPAASCWFWNITSLKDLILSGNRLYGQLPD 284
Query: 296 FLTQMKALEHLDLS--------------------SSMIGDDSVEMVACVGANLRNL 331
L M +L+ LD S SS D ++E + + NLRNL
Sbjct: 285 ALADMTSLQVLDFSINRPVPISPIGLLPSSQAPPSSGDDDAAIEGITIMAENLRNL 340
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 139 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
S+L L LS+ LT + + L+NL+ +DL + L + +LT L Y+DL +
Sbjct: 393 FSSLVYLDLSQNYLTGQLPSEIGMLRNLTWMDLSYNGLVHLP-PEIGMLTNLAYIDLGHN 451
Query: 199 QVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSNCTIDSILEGN-- 250
S+ + + M L +L+L++ + +++SLE + L +++ +++
Sbjct: 452 NFSHLPSEI-GMLSNLGYLDLSFNNLDGVITEKHFAHLASLESIYLPYNSLEIVVDPEWL 510
Query: 251 -----------------------ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 287
+ + + ++ +A T+ + + + S ++LD+S
Sbjct: 511 PPFRLKYAYFYCCQMGPMFPKWLQTQVDIIELDIANTSIKDTFPEWFWTTVSKATYLDIS 570
Query: 288 NSSLSRFCFLTQMKA--LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 345
N+ + R T M+ LE L S++I + E+ NL L++SN S G
Sbjct: 571 NNQI-RGGLPTNMETMLLETFYLDSNLITGEIPELP----INLETLDISNNYLS----GP 621
Query: 346 LAGHL--PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
L ++ PNL L+L QI + Y+ + +L+ +D+ N +G
Sbjct: 622 LPSNIGAPNLAHLNLYSNQISGHIPGYLCNLGALEALDLGNNRFEG 667
>gi|343414367|emb|CCD21012.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1699
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 196/399 (49%), Gaps = 61/399 (15%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ ++ L+ LDLS C +TD + L +S+L
Sbjct: 903 VSPLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSL 958
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQ 199
L LS TG+T ++ LS L +L LDL +TD+ L L+ L LDL +
Sbjct: 959 RTLDLSHCTGIT--DVSPLSELSSLRTLDLSHCTGITDV--SPLSKLSSLRTLDLSHCTG 1014
Query: 200 VSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
+++ + L L L+L+ T V+ L +SSL L+LS+CT G + +P
Sbjct: 1015 ITD--VSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCT------GITDVSP 1066
Query: 256 LAKIS------LAGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKALEHLDL 308
L+K+S L+ T I + E S L LD+S+ + ++ L+++ +L LDL
Sbjct: 1067 LSKLSSLRTLDLSHCTGITDVSPL--SELSSLRTLDLSHCTGITDVSPLSELSSLRTLDL 1124
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLS-GTQIDD 365
S G V ++ + ++LR L+LS+ G+ ++ L +L L LS T I D
Sbjct: 1125 -SHCTGITDVSPLSEL-SSLRTLDLSHC----TGITDVSPLSELSSLRTLDLSHCTGITD 1178
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VS 424
+S +S + SL +++S+ G ++ L L+ L L+L + ++
Sbjct: 1179 --VSPLSKLSSLCTLELSH--CTGITD-----------VSPLSELSSLRTLDLSHCRGIT 1223
Query: 425 DATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 461
D + PLS + L L + + +TDVS L LSSL L
Sbjct: 1224 DVS--PLSELSNFVQLDLSHCTGITDVSPLSVLSSLRTL 1260
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 200/432 (46%), Gaps = 81/432 (18%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ + L LDLS C +T+ + L S+L
Sbjct: 627 VSPLSELSSLRTLDLSHCTGITD--VSPLSKFSSLHTLDLSHCTGITN--VSPLSKFSSL 682
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQ 199
L +S TG+T ++ LS L +L LDL +TD+ L L+ L LD +
Sbjct: 683 RMLDISHCTGIT--NVSPLSKLSSLHTLDLSHCTGITDV--SPLSKLSSLRTLDFSHCTG 738
Query: 200 VSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 255
++N + L L L+++ T V+ L +SSL L+LS+CT N +P
Sbjct: 739 ITN--VSPLSELSSLRTLDISHCTGITDVSPLSELSSLRTLDLSHCT------DITNVSP 790
Query: 256 LAKIS---------LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 306
L+KIS G T ++ + +E LS + ++ L+++ +L L
Sbjct: 791 LSKISTLQKLDLSHCTGVTDVSPLSKMIGLEKLYLSHC----TGITDVPPLSELSSLRML 846
Query: 307 DLS-SSMIGDDS----------VEMVACVG----------ANLRNLNLSNTRFSSAGVGI 345
DLS + I D S +++ C G ++LR L+LS+ G+
Sbjct: 847 DLSHCTGITDVSPLSELSSLHTLDLSHCTGITDVSPLSELSSLRTLDLSHC----TGITD 902
Query: 346 LA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAET 398
++ L +L L LS T I D +S +S + SL+ +D+S+ TD+ + T
Sbjct: 903 VSPLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRT 960
Query: 399 -DL-----VLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDV 450
DL + ++ L L+ L L+L T ++D + PLS L L L + + +TDV
Sbjct: 961 LDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVS--PLSKLSSLRTLDLSHCTGITDV 1018
Query: 451 S-LHQLSSLSKL 461
S L +LSSL L
Sbjct: 1019 SPLSELSSLRTL 1030
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 168/381 (44%), Gaps = 63/381 (16%)
Query: 107 ALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
L L G CL+ LDLS C +TD + L +S L L LS GI +S L NL
Sbjct: 350 TLRDLDGNECLRTLDLSHCTGITDVSL--LSKLSGLHTLGLSH----CTGITDVSPLSNL 403
Query: 167 SVLDLGGLP----VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW 221
S L + GL +TD + L L+ L L L + +++ + L +F L L ++
Sbjct: 404 SGLRMLGLSHCTGITD--VSPLSELSSLRTLGLSHCTGITD--VSPLSVFSSLRTLGISH 459
Query: 222 ----TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA------KISLAGTTFINERE 271
T V+ L ++ L+ L LS+CT G + PL+ K+ L+ T I +
Sbjct: 460 CTGITDVSPLSKMNGLQKLYLSHCT------GITDVPPLSALSSFEKLDLSHCTGITDVS 513
Query: 272 AFLYIETSLLSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 330
+ + L LD+S+ + ++ L++M L+ L LS D + A ++
Sbjct: 514 PLSVLSS--LRTLDISHCTGITDVSPLSKMNGLQKLYLSHCTGITDVPPLSAL--SSFEK 569
Query: 331 LNLSNTRFSSAGVGILA--GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 388
L+LS+ G+ ++ L +L L LS + ++ P LKF + DI
Sbjct: 570 LDLSHC----TGITDVSPLSKLSSLHTLDLS------HCTGITNVSPLLKFSSLRMLDIS 619
Query: 389 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASL 447
+ +++ L L+ L L+L T ++D + PLS F L L L + +
Sbjct: 620 HCTG--------ITNVSPLSELSSLRTLDLSHCTGITDVS--PLSKFSSLHTLDLSHCT- 668
Query: 448 TDVSLHQLSSLSKLTNLSIRD 468
+ +S LSK ++L + D
Sbjct: 669 ---GITNVSPLSKFSSLRMLD 686
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 47/260 (18%)
Query: 83 MAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTL 142
++ L LR+L+++ C +T + L+ ++ L+ LDLS C +TD + L +S+L
Sbjct: 1363 VSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITD--VSPLSVLSSL 1418
Query: 143 EKLWLSE-TGLTADGIALLSSLQNLSVLDLG---GL----PVTDLV-LRSLQV-----LT 188
L LS TG+T ++ LS L +L LDL G+ P+++L LR+L + +T
Sbjct: 1419 RTLGLSHCTGIT--DVSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGIT 1476
Query: 189 KLEYLDLWGSQVS---NRGAAVLKMFPRLSFLNL---------AWTGVTKLPNISSLECL 236
+ L ++ S + + + + P NL T V+ L +SSL L
Sbjct: 1477 DVSPLSVFSSLRTLGLSHCTGITDVSPLSELSNLRTLDLSHCTGITDVSPLSELSSLRTL 1536
Query: 237 NLSNCTIDSILEGNENKAPLAKIS------LAGTTFINEREAFLYIETSLLSFLDVSN-S 289
+LS+CT G + +PL+++S L+ T I + + + L LD+S+ +
Sbjct: 1537 DLSHCT------GITDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSS--LRTLDLSHCT 1588
Query: 290 SLSRFCFLTQMKALEHLDLS 309
++ L+++ +L LDLS
Sbjct: 1589 GITDVSPLSELSSLRTLDLS 1608
>gi|301088808|ref|XP_002894796.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108394|gb|EEY66446.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 825
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 218/523 (41%), Gaps = 107/523 (20%)
Query: 68 EAIELRGENSVDAEWMAYL---------GAFRYLRSLNVADCRRVTSSALWALTGMTCLK 118
+ ++LR V EW+ + G FR L + +T S + L+ + L
Sbjct: 34 QEVDLRNFTCVSNEWLFAIASHPAASGSGTFRTLILAGTS----ITDSGIVHLSKLKSLT 89
Query: 119 ELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLP 175
LD+S C +TDAG+ + +S+L+ L L E + + + + L L + G P
Sbjct: 90 SLDVSGCHALTDAGLNTIRRQLSSLQTLHLDECYHFSSAVLCNVWKDCKRLHSLSIRGCP 149
Query: 176 -VTDLVLRSLQVLTK-----LEYLD------LWGSQVSNRGAAVLKMFPRLSFL------ 217
VTD L+ L + L LD L S +S + LK ++++L
Sbjct: 150 GVTDAFLQCLATTKRSSEANLRSLDARQCKHLTSSGISYLANSSLKDM-KINYLAVDDCL 208
Query: 218 ---NLAWTGVTKLPNI--------------------------SSLECLNLSNCTIDS--- 245
N+A+ G P + +SL+CLN++ C + S
Sbjct: 209 GVDNVAFFGFETSPGLRSLSSLSLSGLCVDETAISWIVKGCGASLQCLNVARCKVLSDFA 268
Query: 246 -ILEGNENKAPLAKISLAGTTFINEREAFLYIET---SLLSFLDVSNSSLSRFCFLTQMK 301
+L APL IS +N +E L T +L S + N
Sbjct: 269 LLL-----MAPL--ISSPRFIKLNLQECPLITNTGIKNLFSLEEEKNQDDDEI----LPT 317
Query: 302 ALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLS 359
+L L+L + + IGDD++ ++ G NL LNL R S G+ LA P L+ +SLS
Sbjct: 318 SLAFLNLKNCLNIGDDAMVLIGKYGGNLIKLNLKGLRKVSDRGIMELAKGCPLLKKMSLS 377
Query: 360 GTQIDDYAISYMS-MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 418
G I + + L+ +DIS ++ E+ L + ++ L R++L
Sbjct: 378 GRNITVQTFKLLGKLCRKLQVLDIS--------RRRDLESPACF-LHLVSRVHPLLRIDL 428
Query: 419 EQTQVSDATLFPL-STFKELIHLSL-RNASLTDVSLHQLSS------LSKLTNL-SIRDA 469
T V DA + L S ++L +++L + A +TD + L+S + L N I D
Sbjct: 429 SATNVCDAGVTLLASACRQLENINLSKCAQITDFAAEALASRCFQLRILLLANARGITDR 488
Query: 470 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 512
LT L K P L++LDL G +T++ +L C +I+
Sbjct: 489 TLT--ALAFTKIP--LEILDLSGNTRVTDEGLLVLCSGCQQIQ 527
>gi|224088270|ref|XP_002308399.1| predicted protein [Populus trichocarpa]
gi|222854375|gb|EEE91922.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 169/381 (44%), Gaps = 56/381 (14%)
Query: 86 LGAFRYLRSLNVADCRRVTS--SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+G L++L++++ ++TS S LW+L LK L+LS +++ ++ + LE
Sbjct: 86 IGKLSKLQTLDLSN-NKITSLPSDLWSLG---TLKVLNLSSN-QISGPLPNNIGNFGALE 140
Query: 144 KLWLSETGLTADGIALLSSLQNLSVLDL------GGLPVTDLVLRSLQVLTKLEYLDLWG 197
+ LS + + A +SSL L VL L G +P L +SL + L L G
Sbjct: 141 TIDLSSNNFSGEIPAAISSLGGLRVLKLDRNGFEGSIPSGILSCQSLYFI-DLSMNKLDG 199
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGV----TKLPNISSLECLNLSNCTIDSILEGNENK 253
S GAA FP+L LNLA G+ + + S+ LN+S + + G +
Sbjct: 200 SLPDGFGAA----FPKLKTLNLAGNGIQGRDSDFSLMKSITSLNISGNSFQGSVMGVFQE 255
Query: 254 APLAKISLAGTTFINEREAFLYIET---SLLSFLDVSNSSLSRFCF--LTQMKALEHLDL 308
+ + L+ F + T S L +LD+S + LS F +Q L++L+L
Sbjct: 256 L-VEVMDLSKNQFQGHISQVHFNSTYNWSRLVYLDLSENQLSGEIFQDFSQAPNLKYLNL 314
Query: 309 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 368
+ + + + + + L LNLS T + GH+P+ EI LS D +
Sbjct: 315 AFNRFTKEDFPRIDML-SELEYLNLSKTS--------VTGHIPS-EIAQLSSLHTLDLSQ 364
Query: 369 SYMS------MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 422
+++S + +L+ +D+S+ ++ G I ++ LQ L +E N
Sbjct: 365 NHLSGQIPRLTIKNLQVLDVSHNNLSGEI-----------PVSLLQKLPRMESYNFSYNN 413
Query: 423 VS-DATLFPLSTFKELIHLSL 442
++ T F TF+ H SL
Sbjct: 414 LTLCGTEFSRETFQTHFHGSL 434
>gi|167862032|gb|ACA05715.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698976|gb|ACN19224.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|290980460|ref|XP_002672950.1| predicted protein [Naegleria gruberi]
gi|284086530|gb|EFC40206.1| predicted protein [Naegleria gruberi]
Length = 331
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 14/220 (6%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
L FL + + F+++MK L LD+S + I + ++++ + L +LN++
Sbjct: 112 LKFLGYLLGGIEKLKFISEMKQLISLDISYNRIDGEGAKLISEM-KQLTSLNINGNVIGG 170
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
G ++G + L L + +I Y+S M L +DI Q+G E
Sbjct: 171 EGAKFISG-MKQLTSLYIYNNRIGGEGAKYISEMKQLISLDIGGN-------QIGDE--- 219
Query: 401 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 460
+ + + L LN+ + DA + K+L L++ + D ++ + +
Sbjct: 220 --EVKLISEMKQLTSLNIANNVIGDAGAKFIGDMKQLTSLNISYNVIGDEGAKYINEMKQ 277
Query: 461 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
LT+L+I + N+G + L LD+ G + E A
Sbjct: 278 LTSLNITRNEIGNAGAKFISEMKQLTSLDIAGNRIGGEGA 317
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 106/243 (43%), Gaps = 45/243 (18%)
Query: 81 EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIS 140
E + ++ + L SL+++ R+ ++ M L L+++ V + G K + +
Sbjct: 123 EKLKFISEMKQLISLDIS-YNRIDGEGAKLISEMKQLTSLNINGNV-IGGEGAKFISGMK 180
Query: 141 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L L++ + +G +S ++ L LD+GG + D ++ + + +L L++ + +
Sbjct: 181 QLTSLYIYNNRIGGEGAKYISEMKQLISLDIGGNQIGDEEVKLISEMKQLTSLNIANNVI 240
Query: 201 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 260
+ GA + +L+ LN+++ + G+E
Sbjct: 241 GDAGAKFIGDMKQLTSLNISYNVI------------------------GDE--------- 267
Query: 261 LAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 319
G +INE + TSL ++ ++ N+ F+++MK L LD++ + IG + +
Sbjct: 268 --GAKYINEMKQL----TSLNITRNEIGNAGAK---FISEMKQLTSLDIAGNRIGGEGAK 318
Query: 320 MVA 322
++
Sbjct: 319 FIS 321
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
+++MK L L+++ ++IG + + ++ + L +L + N R G ++ + L L
Sbjct: 152 ISEMKQLTSLNINGNVIGGEGAKFISGM-KQLTSLYIYNNRIGGEGAKYIS-EMKQLISL 209
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN--- 409
+ G QI D + +S M L ++I+N I FI + T L +S + +
Sbjct: 210 DIGGNQIGDEEVKLISEMKQLTSLNIANNVIGDAGAKFIGDMKQLTSLNISYNVIGDEGA 269
Query: 410 -----LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 464
+ L LN+ + ++ +A +S K+L L + + +S + +L +L
Sbjct: 270 KYINEMKQLTSLNITRNEIGNAGAKFISEMKQLTSLDIAGNRIGGEGAKFISEMKQLISL 329
>gi|223698835|gb|ACN19130.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|148235993|ref|NP_001082850.1| leucine rich repeat and Ig domain containing 4b precursor [Danio
rerio]
Length = 604
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 37/214 (17%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
+ + LE LDLS ++I VE + NLR L + N R VG+ +G L NL L
Sbjct: 78 FSSLSKLEDLDLSENIISMIEVETFQGL-KNLRYLRIKNNRLKILPVGVFSG-LSNLRRL 135
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLER 415
+S +I L F+D + D+ Q E DLV +S A L L+
Sbjct: 136 DISENEI-------------LVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKE 182
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS------LHQLSSL----------- 458
LN++++ ++ LS + L L LR +++ + LHQL +L
Sbjct: 183 LNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEML 242
Query: 459 --SKLTNLSIRDAVLTNSGLGS--FKPPRSLKLL 488
+ L L++ VLTN L + + P R L L
Sbjct: 243 NSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYL 276
>gi|148607482|gb|ABQ95519.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|290970038|ref|XP_002668017.1| predicted protein [Naegleria gruberi]
gi|284081041|gb|EFC35273.1| predicted protein [Naegleria gruberi]
Length = 306
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 115/257 (44%), Gaps = 43/257 (16%)
Query: 86 LGAFRYL-----RSLNVADCRRVTS----------SALWALTGMTCLKELDLSRCVKVTD 130
L FRYL + ++D +R+TS + ++GM L LD+S + +D
Sbjct: 57 LKVFRYLLDSFEKLKFISDMKRLTSLDISFNQIGVQGVKFISGMKQLTSLDIS-FNQASD 115
Query: 131 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 190
G K++ + L L +S+ + +G +S ++ L+ L+L + D + + + +L
Sbjct: 116 EGAKYISEMKQLTSLGISKNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQL 175
Query: 191 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLPNISSLECLNLSNCTIDS 245
LD+ + + G +K +L+ LN+ + G+ + + L LN++N I
Sbjct: 176 TSLDISSNLIDVEGVKFIKEMKQLTSLNIYYNGIGVEGAKYISEMKQLTSLNITNNEI-- 233
Query: 246 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
G+E G +I+E + + + ++S + + C +M+ L
Sbjct: 234 ---GDE-----------GAKYISEMKQLISL---IISRNQIGDEGAKYIC---EMEQLTS 273
Query: 306 LDLSSSMIGDDSVEMVA 322
L++S + IGD+ + ++
Sbjct: 274 LNISGNEIGDEGAKYIS 290
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 114/256 (44%), Gaps = 29/256 (11%)
Query: 133 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 192
+K + + L L +S + G+ +S ++ L+ LD+ +D + + + +L
Sbjct: 70 LKFISDMKRLTSLDISFNQIGVQGVKFISGMKQLTSLDISFNQASDEGAKYISEMKQLTS 129
Query: 193 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSIL 247
L + + + + GA + +L+ LNL + G + + L L++S+ ID
Sbjct: 130 LGISKNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQLTSLDISSNLID--- 186
Query: 248 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 307
+ G FI E + TSL + + +++ +++MK L L+
Sbjct: 187 -------------VEGVKFIKEMKQL----TSLNIYYNGIGVEGAKY--ISEMKQLTSLN 227
Query: 308 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 367
++++ IGD+ + ++ + L +L +S + G + + L L++SG +I D
Sbjct: 228 ITNNEIGDEGAKYISEM-KQLISLIISRNQIGDEGAKYIC-EMEQLTSLNISGNEIGDEG 285
Query: 368 ISYMSMMPSLKFIDIS 383
Y+S M L +DIS
Sbjct: 286 AKYISDMKQLTSLDIS 301
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 296 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
F++ MK L LD+S + D+ + ++ + L +L +S G ++ + L
Sbjct: 96 FISGMKQLTSLDISFNQASDEGAKYISEM-KQLTSLGISKNLIGDEGAKYIS-EMKQLTS 153
Query: 356 LSLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKG--FIQQVGAETDL--------VLS 403
L+L +I D Y+S M L +DIS+ D++G FI+++ T L V
Sbjct: 154 LNLYYNEICDEGAKYISEMEQLTSLDISSNLIDVEGVKFIKEMKQLTSLNIYYNGIGVEG 213
Query: 404 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 463
+ + L LN+ ++ D +S K+LI L + + D + + +LT+
Sbjct: 214 AKYISEMKQLTSLNITNNEIGDEGAKYISEMKQLISLIISRNQIGDEGAKYICEMEQLTS 273
Query: 464 LSIRDAVLTNSGLGSFKPPRSLKLLDL 490
L+I + + G + L LD+
Sbjct: 274 LNISGNEIGDEGAKYISDMKQLTSLDI 300
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 14/223 (6%)
Query: 290 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 349
S + F++ MK L LD+S + IG V+ ++ + L +L++S + S G ++
Sbjct: 66 SFEKLKFISDMKRLTSLDISFNQIGVQGVKFISGM-KQLTSLDISFNQASDEGAKYIS-E 123
Query: 350 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLS-- 403
+ L L +S I D Y+S M L +++ +I +I ++ T L +S
Sbjct: 124 MKQLTSLGISKNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQLTSLDISSN 183
Query: 404 ------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 457
+ ++ + L LN+ + +S K+L L++ N + D +S
Sbjct: 184 LIDVEGVKFIKEMKQLTSLNIYYNGIGVEGAKYISEMKQLTSLNITNNEIGDEGAKYISE 243
Query: 458 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 500
+ +L +L I + + G L L++ G + E A
Sbjct: 244 MKQLISLIISRNQIGDEGAKYICEMEQLTSLNISGNEIGDEGA 286
>gi|195127626|ref|XP_002008269.1| GI11909 [Drosophila mojavensis]
gi|193919878|gb|EDW18745.1| GI11909 [Drosophila mojavensis]
Length = 1550
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 28/362 (7%)
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
++ +E G ALL +L L LD+ G +++L +L+ LE L L +Q+ +
Sbjct: 339 IYNNEIGHVEALRALLDALPTLRFLDMSGNLLSELPYGALRGHGTLEQLHLNNNQLRSIE 398
Query: 205 AAVLKMFPRLSFLNLAWTGVT---KLP--NISSLECLNLSN---CTIDS-ILEGNENKAP 255
L P L L + ++ LP N+ L+ L+L+ +DS +L G
Sbjct: 399 RDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFVRVDSQLLAG---LPS 455
Query: 256 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 315
L ++ L+ + + A + SLL L++S++ L+ T M ++ +S +
Sbjct: 456 LRRLDLSENGLV-DLAANSFRHNSLLETLNISSNELTHIYPGTFMHLERLFEVDASY--N 512
Query: 316 DSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 374
M+ + + ++L R SS G + LPNL +L LS I+
Sbjct: 513 QLTAMIPGLPQIVERISLRGNRISSLPPAGSKSLQLPNLRMLDLSQNLIEQLPRHGFQAA 572
Query: 375 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
P L+ + ++ ++ +L T+ + LE L+L+ Q+S A L
Sbjct: 573 PELRVLSLAQNQLR------------LLEDTSFIGIQRLELLHLQDNQLSQADERALLPL 620
Query: 435 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 494
EL +L+L++ L ++ + S+ S+L L + ++ +F RSL+ LDL G
Sbjct: 621 AELRNLNLQSNKLESITDNFFSNNSRLEQLDLSRNLIRTISPTAFDNQRSLEYLDLSGNA 680
Query: 495 LL 496
LL
Sbjct: 681 LL 682
>gi|298360020|gb|ADI77589.1| truncated internalin A [Listeria monocytogenes]
gi|298360528|gb|ADI77843.1| truncated internalin A [Listeria monocytogenes]
Length = 459
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|85679222|gb|ABC72027.1| InlA [Listeria monocytogenes]
Length = 791
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 147/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 150
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L ++ TI I L+G T + +
Sbjct: 151 NQITDIDALKNLTNLNRLEITGNTISDI------------SVLSGLTSLQQ--------- 189
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLERLIATNNQI 240
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLT 294
Query: 398 --TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L + N++ +E L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLALYFNNISD 352
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 353 IS--PVSSLTKL 362
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ A + L +LN + T S + L+G+T L++L +VTD +K L +++TLE+L
Sbjct: 156 IDALKNLTNLNRLEITGNTISDISVLSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 211
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 212 DISSNKVS--DISVLAKLTNLERLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 266
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L++A ++ L +S L L
Sbjct: 267 -TLASLTNLTSLDVANNQISNLAPLSGLTKL 296
>gi|148607488|gb|ABQ95520.1| InlA [Listeria monocytogenes]
Length = 797
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|449435625|ref|XP_004135595.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
Length = 640
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 169/382 (44%), Gaps = 47/382 (12%)
Query: 117 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSS-LQNLSVLDLGG 173
LKE+ L +C+ VTD G+ ++ LE+L L +D G+ LL NL LDL
Sbjct: 146 LKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGLELLCKKCFNLRFLDLSY 205
Query: 174 LPVTDLVLRSLQVLTKLEYL--------DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
L VT+ LRS+ L KLE L D G Q G LK ++ G+T
Sbjct: 206 LKVTNESLRSISSLPKLETLVMAGCLSVDDAGLQFLEHGCPFLKKLDISRCDGISSYGLT 265
Query: 226 K-LPNISSLECLNLSNC----TIDSILEGNENKAPLAKISLAGT----TFIN--EREAFL 274
L LE L+ S C + DSI +N L I L GT TF N
Sbjct: 266 SILRGHDGLEQLDASYCISELSTDSIYS-LKNLKCLKAIRLDGTQLSSTFFNVISVHCEY 324
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNL 333
+E L L V+++++ + +++ +L+ L+L+ I D ++ A L +L L
Sbjct: 325 LVELGLSKCLGVTDANIIQ--LISRCISLKVLNLTCCHSITDAAISKTATSCLKLMSLKL 382
Query: 334 -SNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYA---ISYMSMMPSLKFIDISNTDIK 388
S + + LA + P+LE L L+ ++D +S S + SLK +N K
Sbjct: 383 ESCNMITERSLDQLALNCPSLEELDLTDCCGVNDKGLECLSRCSQLLSLKLGLCTNITDK 442
Query: 389 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLST-FKELIHLSLRNAS 446
G I ++G N + L+L + + DA L LS+ K+L+ L+L +
Sbjct: 443 GLI-KIGL------------NCKRIHELDLYRCLGIGDAGLEALSSGCKKLMKLNLSYCN 489
Query: 447 -LTDVSLHQLSSLSKLTNLSIR 467
LTD + + L +L L IR
Sbjct: 490 KLTDRGMGYIGHLEELCVLEIR 511
>gi|443428838|gb|AGC92218.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|371942096|gb|AEX60860.1| internaline [Listeria monocytogenes]
Length = 790
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698607|gb|ACN18978.1| internalin A [Listeria monocytogenes]
gi|223698703|gb|ACN19042.1| internalin A [Listeria monocytogenes]
gi|223698760|gb|ACN19080.1| internalin A [Listeria monocytogenes]
gi|223698907|gb|ACN19178.1| internalin A [Listeria monocytogenes]
gi|223698910|gb|ACN19180.1| internalin A [Listeria monocytogenes]
gi|223698916|gb|ACN19184.1| internalin A [Listeria monocytogenes]
gi|223698919|gb|ACN19186.1| internalin A [Listeria monocytogenes]
gi|223698964|gb|ACN19216.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|195378686|ref|XP_002048114.1| GJ13783 [Drosophila virilis]
gi|194155272|gb|EDW70456.1| GJ13783 [Drosophila virilis]
Length = 1556
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 152/348 (43%), Gaps = 26/348 (7%)
Query: 158 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 217
ALL +L L LD+ G +++L +L+ LE L L +Q+ L P L L
Sbjct: 352 ALLDALPTLRFLDMSGNLLSELPYGALRGHGTLEQLHLNNNQLRLIERDALMAMPALREL 411
Query: 218 NLAWTGVT-KLP----NISSLECLNLSN---CTIDSILEGNENKAPLAKISLAGTTFINE 269
+ ++ +LP N+ L+ L+L+ +DS L +S G T +
Sbjct: 412 RMRNNSLSSELPLPFWNLPGLKGLDLAQNQFVRVDSQLLAGLPSLRRLDLSENGLTDL-- 469
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
A + SLL L++S++ LS T M ++ +S + ++ + +
Sbjct: 470 -AANTFRHNSLLETLNISSNELSHIHPGTFMHLERLFEVDASF--NQLSAIIPGLPQIVE 526
Query: 330 NLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 388
++L R ++ G + LPNL +L LS QI+ A P L+ + ++ ++
Sbjct: 527 RISLRGNRIAALPAAGSKSLQLPNLRMLDLSQNQIEQLARHGFQAAPQLRVLSLAQNQLR 586
Query: 389 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 448
+L T+ + LE L+L+ Q+ A L EL +L+L++ L
Sbjct: 587 ------------LLEDTSFIGIQRLELLHLQDNQLGQADERALLPLAELRNLNLQSNKLE 634
Query: 449 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 496
++ + S+ S+L L + ++ + +F RSL+ LDL G LL
Sbjct: 635 SITDNFFSNNSRLEQLDLSRNLIRSISPTAFDNQRSLEYLDLSGNALL 682
>gi|428171120|gb|EKX40039.1| hypothetical protein GUITHDRAFT_50256, partial [Guillardia theta
CCMP2712]
Length = 302
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 24/310 (7%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L G+T + S LQ L L LG +T L L L+YLDL G+++++
Sbjct: 3 LYSQGITNMTKGVFSGLQGLQSLSLGANELTSLPEGVFSGLEGLQYLDLSGNELTSLPEG 62
Query: 207 VLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEG-NENKAPLAKIS 260
V L L+L +T LP +S L+ LNL N + S+ EG L +S
Sbjct: 63 VFSGLSGLQGLSLG-NVLTSLPEGVFSELSGLQWLNLWNTQLTSLPEGVFSGLQGLQGLS 121
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSV 318
L G + E ++ S L +L++ ++ L+ + + L+ L L + +
Sbjct: 122 LVGNVLTSLPEG-VFSGLSGLQWLELWDTQLTSLPVGVFSGLSGLQGLYLGGNEL-TSLP 179
Query: 319 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 378
E V + LR+L LS+ + +S G+ +G L L+ L LS TQ+ S + LK
Sbjct: 180 EGVFSGLSGLRSLELSHNQLTSLPEGVFSG-LSGLQGLYLSHTQLTSLPEGVFSGLSGLK 238
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 438
++ +S+ + + V L+ L+ L+L+ Q++ S +LI
Sbjct: 239 YLYLSHNQLTSLPEGV------------FSGLSGLQYLDLQYNQLTCIPSQAFSDSNDLI 286
Query: 439 HLSLRNASLT 448
++ L+N LT
Sbjct: 287 NVWLQNNHLT 296
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 13/232 (5%)
Query: 87 GAFRYLRSLNVAD--CRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEK 144
G F L L D +TS +G++ L+ L L + G+ +S L+
Sbjct: 38 GVFSGLEGLQYLDLSGNELTSLPEGVFSGLSGLQGLSLGNVLTSLPEGVFS--ELSGLQW 95
Query: 145 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 204
L L T LT+ + S LQ L L L G +T L L+ L++L+LW +Q+++
Sbjct: 96 LNLWNTQLTSLPEGVFSGLQGLQGLSLVGNVLTSLPEGVFSGLSGLQWLELWDTQLTSLP 155
Query: 205 AAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEG-NENKAPLAK 258
V L L L +T LP +S L L LS+ + S+ EG + L
Sbjct: 156 VGVFSGLSGLQGLYLGGNELTSLPEGVFSGLSGLRSLELSHNQLTSLPEGVFSGLSGLQG 215
Query: 259 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDL 308
+ L+ T + E ++ S L +L +S++ L+ + + L++LDL
Sbjct: 216 LYLSHTQLTSLPEG-VFSGLSGLKYLYLSHNQLTSLPEGVFSGLSGLQYLDL 266
>gi|47848049|dbj|BAD21834.1| putative HcrVf2 protein [Oryza sativa Japonica Group]
Length = 960
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 61/318 (19%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W + LR L ++DC + + A +T L++LDLS V T + + T
Sbjct: 212 WAGVVSNLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLSTNVINTSSANSWFWDVPT 271
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L L LS L+ L ++ NL VL+L G + ++ +LQ L L+ +DL + V+
Sbjct: 272 LTYLDLSGNALSGVFPDALGNMTNLRVLNLQGNDMVGMIPATLQRLCGLQVVDLTVNSVN 331
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE---------- 251
A ++ PR F L + L +N+S I E +E
Sbjct: 332 GDMAEFMRRLPRCVFGKL---------QVLQLSAVNMSGHLPKWIGEMSELTILDLSFNK 382
Query: 252 --NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
+ PL SL+ T L++ +LL N SLS F + +LE +DLS
Sbjct: 383 LSGEIPLGIGSLSNLT-------RLFLHNNLL------NGSLSEEHF-ADLVSLEWIDLS 428
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
L NL++ ++ + P++ Q+ + +
Sbjct: 429 ------------------LNNLSMEIKPSWKPPCKLVYAYFPDV--------QMGPHFPA 462
Query: 370 YMSMMPSLKFIDISNTDI 387
++ PS+K++DISN I
Sbjct: 463 WIKHQPSIKYLDISNAGI 480
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 153/362 (42%), Gaps = 59/362 (16%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGM------KHLLSISTLEKLWLSETGLTADGIALLSSL 163
+L G+ L LDLS+ + G+ + L S+ L L LS TGL + L +L
Sbjct: 108 SLLGLPRLAYLDLSQNNLIGGDGVSPSPLPRFLGSLCDLRYLNLSFTGLAGEIPPQLGNL 167
Query: 164 QNLSVLDL----GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L LDL GGL D + L ++ LEYLD+ V N A+V
Sbjct: 168 TRLRQLDLSSNVGGLYSGD--ISWLSGMSSLEYLDM---SVVNLNASV------------ 210
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREA-FLYI 276
W GV N+ SL L LS+C + + N L K+ L+ T IN A +
Sbjct: 211 GWAGVVS--NLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLS-TNVINTSSANSWFW 267
Query: 277 ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
+ L++LD+S ++LS L M L L+L G+D V M+ L L +
Sbjct: 268 DVPTLTYLDLSGNALSGVFPDALGNMTNLRVLNLQ----GNDMVGMIPATLQRLCGLQVV 323
Query: 335 NTRFSSAGVGILAG---HLP-----NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
+ +S G +A LP L++L LS + + ++ M L +D+S
Sbjct: 324 DLTVNSVN-GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIGEMSELTILDLSFNK 382
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
+ G ++ L + +L NL L NL +S+ L + E I LSL N
Sbjct: 383 LSG---------EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNL 432
Query: 446 SL 447
S+
Sbjct: 433 SM 434
>gi|328876855|gb|EGG25218.1| hypothetical protein DFA_03466 [Dictyostelium fasciculatum]
Length = 1101
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 189/439 (43%), Gaps = 94/439 (21%)
Query: 68 EAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVK 127
+ + L G + + + + + + L L + + + +A+ L + L L++S C
Sbjct: 662 QKLYLTGCKGISDDALTSVSSIQTLEVLRIDGGFQFSENAMSNLAKLINLTSLNISGCTH 721
Query: 128 VTDAGMKHLLSIS-TLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLP-VTDLVLRS 183
TD + L+ L +L+ S L D + +L SL NL +L + G P ++D L
Sbjct: 722 TTDHVIDLLICYCRQLTQLYCSNLPLITDKVIPPMLVSLVNLKLLRVDGCPNISDRSLNG 781
Query: 184 LQVLTKLEYLDLW---GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL---------PNIS 231
L+ +K+ YL+ + G+ +S++G + + + L G + P +
Sbjct: 782 LR-FSKILYLETFNCSGTSISDQG--IFSILSHCAIRELYMWGCDLISDEGLRLITPYLQ 838
Query: 232 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 291
+LE L + C KI+ G + I+T++L+ L++S + L
Sbjct: 839 NLEVLRVDQC---------------HKITDKGIRVV-------LIKTAILNTLNISGTQL 876
Query: 292 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHL 350
S DD++ VA L+ L +N + S G+G ++
Sbjct: 877 S----------------------DDTLSNVAAYNKLLKKLICNNCPKISDKGIGAVSMQC 914
Query: 351 PNLEILSLS-GTQIDDYAISYMSMMPS-LKFID------ISNTDIKGFIQ-QVGAETDLV 401
L++L + T+I D A+ +S LK I+ ISNT GFI+ VG
Sbjct: 915 TMLKMLECAKNTRITDTALIELSTRSKYLKKINFSSCPKISNT---GFIKLSVGCPL--- 968
Query: 402 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTF-KELIHLSLRNASL-TDVSLHQLSSLS 459
L+++N+ +T + + + LST+ K +I L++ N SL +D+S+ +
Sbjct: 969 -----------LKQVNIHETFIGEVGILALSTYCKNIISLNVSNCSLVSDLSIIGIG--R 1015
Query: 460 KLTNLSIRDAVLTNSGLGS 478
+ TNL +A T+ G G+
Sbjct: 1016 ECTNLKYLNASFTSIGDGA 1034
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 125/278 (44%), Gaps = 48/278 (17%)
Query: 128 VTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSS-LQNLSVLDLGGL-PVTDLVLRSL 184
++D G+ +LS + +L++ L +D G+ L++ LQNL VL + +TD +R +
Sbjct: 800 ISDQGIFSILSHCAIRELYMWGCDLISDEGLRLITPYLQNLEVLRVDQCHKITDKGIRVV 859
Query: 185 QVLTK-LEYLDLWGSQVSNRG----AAVLKMFPRLSFLNLAWTGVTKLPNISS------- 232
+ T L L++ G+Q+S+ AA K+ +L N + +S
Sbjct: 860 LIKTAILNTLNISGTQLSDDTLSNVAAYNKLLKKLICNNCPKISDKGIGAVSMQCTMLKM 919
Query: 233 LECLNLSNCTIDSILEGNENKAPLAKIS------LAGTTFI------------NEREAFL 274
LEC + T +++E + L KI+ ++ T FI N E F+
Sbjct: 920 LECAKNTRITDTALIELSTRSKYLKKINFSSCPKISNTGFIKLSVGCPLLKQVNIHETFI 979
Query: 275 YIETSLLSF---------LDVSN----SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 321
E +L+ L+VSN S LS + L++L+ S + IGD +V V
Sbjct: 980 G-EVGILALSTYCKNIISLNVSNCSLVSDLSIIGIGRECTNLKYLNASFTSIGDGAVIEV 1038
Query: 322 AC-VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 358
A NL L + NT S AG+ ++A P+L +L +
Sbjct: 1039 AVRSNINLETLEIRNTNVSDAGLQMVANMCPSLRVLDI 1076
>gi|223698655|gb|ACN19010.1| internalin A [Listeria monocytogenes]
gi|223698913|gb|ACN19182.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|158429246|pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 153/317 (48%), Gaps = 54/317 (17%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPR 213
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 57 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 111
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 112 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 155
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
L+ S++ ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 156 ----------LNFSSNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 202
Query: 334 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 203 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
Query: 393 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 314
Query: 445 ASLTDVSLHQLSSLSKL 461
+++D+S +SSL+KL
Sbjct: 315 NNISDIS--PVSSLTKL 329
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L+ S +VTD +K L +++TLE+L
Sbjct: 122 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSN-QVTD--LKPLANLTTLERL 178
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 179 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 233
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 234 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 263
>gi|297817168|ref|XP_002876467.1| hypothetical protein ARALYDRAFT_486305 [Arabidopsis lyrata subsp.
lyrata]
gi|297322305|gb|EFH52726.1| hypothetical protein ARALYDRAFT_486305 [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 31/158 (19%)
Query: 90 RYLRSLNVADCRRVTSSALWALT-GMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
R++ LN++ C+ +T ++ + L+ LD++RCVK+TD G+ + L+K
Sbjct: 163 RHIIDLNLSGCKSLTDKSMQLVAESYQDLESLDITRCVKITDDGL-----LQVLQK---- 213
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAV 207
SSLQ L++ L G TD + + +L L +LDL G+Q +S+ G
Sbjct: 214 -----------CSSLQTLNLYALSGF--TDKAYKKISLLPDLRFLDLCGAQNLSDEGLGH 260
Query: 208 LKMFPRLSFLNLAW------TGVTKLPN-ISSLECLNL 238
+ +L LNL W GV + N +SLE L+L
Sbjct: 261 IAKCNKLESLNLTWCVRITDAGVITIANSCTSLEFLSL 298
>gi|213627601|gb|AAI71652.1| Hypothetical LOC559074 [Danio rerio]
Length = 604
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 37/214 (17%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 356
+ + LE LDLS ++I VE + NLR L + N R VG+ +G L NL L
Sbjct: 78 FSSLSKLEDLDLSENIISMIEVETFQGL-KNLRYLRIKNNRLKILPVGVFSG-LSNLRRL 135
Query: 357 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLER 415
+S +I L F+D + D+ Q E DLV +S A L L+
Sbjct: 136 DISENEI-------------LVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKE 182
Query: 416 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS------LHQLSSL----------- 458
LN++++ ++ LS + L L LR +++ + LHQL +L
Sbjct: 183 LNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEML 242
Query: 459 --SKLTNLSIRDAVLTNSGLGS--FKPPRSLKLL 488
+ L L++ VLTN L + + P R L L
Sbjct: 243 NSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYL 276
>gi|22347546|gb|AAM95918.1| internalin A precursor [Listeria monocytogenes]
gi|22347550|gb|AAM95920.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 115
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKL 307
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|219821273|gb|ACL37760.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDIVMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|91092916|ref|XP_971494.1| PREDICTED: similar to AGAP012123-PA [Tribolium castaneum]
Length = 442
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 92 LRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
LRSL+++ C R+T +AL + + L+EL L RCV +TD G+ ++ ++ +L L+L
Sbjct: 311 LRSLDLSWCPRITDAALEYIACDLNQLEELTLDRCVHITDIGIGYISTMLSLSALYLRWC 370
Query: 151 GLTAD-GIALLSSLQNLSVLDLGGLP 175
D G+ L ++NL +L L G P
Sbjct: 371 SQIRDFGLQHLCGMRNLQILSLAGCP 396
>gi|150371726|dbj|BAF65678.1| internalin A [Listeria monocytogenes]
gi|194326151|emb|CAQ77234.1| internalin A [Listeria monocytogenes]
gi|298360180|gb|ADI77669.1| internalin A [Listeria monocytogenes]
gi|298360390|gb|ADI77774.1| internalin A [Listeria monocytogenes]
gi|298360416|gb|ADI77787.1| internalin A [Listeria monocytogenes]
gi|298360620|gb|ADI77889.1| internalin A [Listeria monocytogenes]
gi|298360656|gb|ADI77907.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|125581626|gb|EAZ22557.1| hypothetical protein OsJ_06223 [Oryza sativa Japonica Group]
Length = 960
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 61/318 (19%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W + LR L ++DC + + A +T L++LDLS V T + + T
Sbjct: 212 WAGVVSNLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLSTNVINTSSANSWFWDVPT 271
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L L LS L+ L ++ NL VL+L G + ++ +LQ L L+ +DL + V+
Sbjct: 272 LTYLDLSGNALSGVFPDALGNMTNLRVLNLQGNDMVGMIPATLQRLCGLQVVDLTVNSVN 331
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE---------- 251
A ++ PR F L + L +N+S I E +E
Sbjct: 332 GDMAEFMRRLPRCVFGKL---------QVLQLSAVNMSGHLPKWIGEMSELTILDLSFNK 382
Query: 252 --NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
+ PL SL+ T L++ +LL N SLS F + +LE +DLS
Sbjct: 383 LSGEIPLGIGSLSNLT-------RLFLHNNLL------NGSLSEEHF-ADLVSLEWIDLS 428
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
L NL++ ++ + P++ Q+ + +
Sbjct: 429 ------------------LNNLSMEIKPSWKPPCKLVYAYFPDV--------QMGPHFPA 462
Query: 370 YMSMMPSLKFIDISNTDI 387
++ PS+K++DISN I
Sbjct: 463 WIKHQPSIKYLDISNAGI 480
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 153/362 (42%), Gaps = 59/362 (16%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGM------KHLLSISTLEKLWLSETGLTADGIALLSSL 163
+L G+ L LDLS+ + G+ + L S+ L L LS TGL + L +L
Sbjct: 108 SLLGLPRLAYLDLSQNNLIGGDGVSPSPLPRFLGSLCDLRYLNLSFTGLAGEIPPQLGNL 167
Query: 164 QNLSVLDL----GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L LDL GGL D + L ++ LEYLD+ V N A+V
Sbjct: 168 TRLRQLDLSSNVGGLYSGD--ISWLSGMSSLEYLDM---SVVNLNASV------------ 210
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREA-FLYI 276
W GV N+ SL L LS+C + + N L K+ L+ T IN A +
Sbjct: 211 GWAGVVS--NLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLS-TNVINTSSANSWFW 267
Query: 277 ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
+ L++LD+S ++LS L M L L+L G+D V M+ L L +
Sbjct: 268 DVPTLTYLDLSGNALSGVFPDALGNMTNLRVLNLQ----GNDMVGMIPATLQRLCGLQVV 323
Query: 335 NTRFSSAGVGILAG---HLP-----NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
+ +S G +A LP L++L LS + + ++ M L +D+S
Sbjct: 324 DLTVNSVN-GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIGEMSELTILDLSFNK 382
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
+ G ++ L + +L NL L NL +S+ L + E I LSL N
Sbjct: 383 LSG---------EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNL 432
Query: 446 SL 447
S+
Sbjct: 433 SM 434
>gi|125538950|gb|EAY85345.1| hypothetical protein OsI_06723 [Oryza sativa Indica Group]
Length = 958
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 61/318 (19%)
Query: 82 WMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSIST 141
W + LR L ++DC + + A +T L++LDLS V T + + T
Sbjct: 210 WAGVVSNLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLSTNVINTSSANSWFWDVPT 269
Query: 142 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 201
L L LS L+ L ++ NL VL+L G + ++ +LQ L L+ +DL + V+
Sbjct: 270 LTYLDLSGNALSGVFPDALGNMTNLRVLNLQGNDMVGMIPATLQRLCGLQVVDLTVNSVN 329
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE---------- 251
A ++ PR F L + L +N+S I E +E
Sbjct: 330 GDMAEFMRRLPRCVFGKL---------QVLQLSAVNMSGHLPKWIGEMSELTILDLSFNK 380
Query: 252 --NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 309
+ PL SL+ T L++ +LL N SLS F + +LE +DLS
Sbjct: 381 LSGEIPLGIGSLSNLT-------RLFLHNNLL------NGSLSEEHF-ADLVSLEWIDLS 426
Query: 310 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 369
L NL++ ++ + P++ Q+ + +
Sbjct: 427 ------------------LNNLSMEIKPSWKPPCKLVYAYFPDV--------QMGPHFPA 460
Query: 370 YMSMMPSLKFIDISNTDI 387
++ PS+K++DISN I
Sbjct: 461 WIKHQPSIKYLDISNAGI 478
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 154/362 (42%), Gaps = 59/362 (16%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGM------KHLLSISTLEKLWLSETGLTADGIALLSSL 163
+L G+ L LDLS+ + G+ + L S+S L L LS TGL + L +L
Sbjct: 106 SLLGLPRLAYLDLSQNNLIGGDGVSPSPLPRFLGSLSDLRYLNLSFTGLAGEIPPQLGNL 165
Query: 164 QNLSVLDL----GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 219
L LDL GGL D + L ++ LEYLD+ V N A+V
Sbjct: 166 TRLRHLDLSSNVGGLYSGD--ISWLSGMSSLEYLDM---SVVNLNASV------------ 208
Query: 220 AWTGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREA-FLYI 276
W GV N+ SL L LS+C + + N L K+ L+ T IN A +
Sbjct: 209 GWAGVVS--NLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLS-TNVINTSSANSWFW 265
Query: 277 ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
+ L++LD+S ++LS L M L L+L G+D V M+ L L +
Sbjct: 266 DVPTLTYLDLSGNALSGVFPDALGNMTNLRVLNLQ----GNDMVGMIPATLQRLCGLQVV 321
Query: 335 NTRFSSAGVGILAG---HLP-----NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 386
+ +S G +A LP L++L LS + + ++ M L +D+S
Sbjct: 322 DLTVNSVN-GDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIGEMSELTILDLSFNK 380
Query: 387 IKGFIQQVGAETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNA 445
+ G ++ L + +L NL L NL +S+ L + E I LSL N
Sbjct: 381 LSG---------EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNL 430
Query: 446 SL 447
S+
Sbjct: 431 SM 432
>gi|432862145|ref|XP_004069745.1| PREDICTED: F-box/LRR-repeat protein 14-like [Oryzias latipes]
Length = 403
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDLSRCVKVTDAGMKHLL-SIST 141
A++ LR LN++ C+++T S+L + + L+ LDL C +T+ G+ + +
Sbjct: 114 AFVQDIPSLRLLNLSLCKQITDSSLGRIAQYLKNLEALDLGGCSNITNTGLLLIAWGLHK 173
Query: 142 LEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 200
L+ L L +D GI +S + + G L + L L+ Q LT L
Sbjct: 174 LKSLNLRSCRHVSDVGIGHISGMTRSAA--EGCLSLEKLTLQDCQKLTDLSL-------- 223
Query: 201 SNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKA 254
V K +L LNL++ G+ L +++ L LNL +C D+I +
Sbjct: 224 ----KHVSKGLNKLKVLNLSFCGGISDAGMIHLSHMAHLCSLNLRSC--DNISDTGIMHL 277
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQ-MKALEHLDLSSSM 312
+ + L+G +SF D + + SL+ ++ Q + L+ L L S
Sbjct: 278 AMGSLQLSGLD---------------VSFCDKIGDQSLA---YVAQGLYQLKSLSLCSCH 319
Query: 313 IGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISY 370
I DD + + L+ LN+ R + G+ ++A HL L + L G T+I +
Sbjct: 320 ISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLER 379
Query: 371 MSMMPSLKFIDIS 383
++ +P LK +++
Sbjct: 380 ITQLPCLKVLNLG 392
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 26/233 (11%)
Query: 63 FKHNAEAIELRGENSVDAEWMAYLG-AFRYLRSLNVADCRRVTSSALWALTGMT------ 115
+ N EA++L G +++ + + L+SLN+ CR V+ + ++GMT
Sbjct: 144 YLKNLEALDLGGCSNITNTGLLLIAWGLHKLKSLNLRSCRHVSDVGIGHISGMTRSAAEG 203
Query: 116 CL--KELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDL 171
CL ++L L C K+TD +KH+ ++ L+ L LS G +D G+ LS + +L L+L
Sbjct: 204 CLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSFCGGISDAGMIHLSHMAHLCSLNL 263
Query: 172 ------GGLPVTDLVLRSLQVLTKLE--YLDLWGSQVSNRGAAVLKMFPRLSF--LNLAW 221
+ L + SLQ L+ L+ + D G Q A L LS +++
Sbjct: 264 RSCDNISDTGIMHLAMGSLQ-LSGLDVSFCDKIGDQSLAYVAQGLYQLKSLSLCSCHISD 322
Query: 222 TGVTKLP-NISSLECLNLSNCT--IDSILE-GNENKAPLAKISLAGTTFINER 270
G+ ++ + L+ LN+ C D LE ++ L I L G T I +R
Sbjct: 323 DGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKR 375
>gi|158429244|pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 54/317 (17%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPR 213
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 57 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 111
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 112 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 155
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
LSF S++ ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 156 -------LSF---SSNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 202
Query: 334 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 203 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
Query: 393 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 314
Query: 445 ASLTDVSLHQLSSLSKL 461
+++D+S +SSL+KL
Sbjct: 315 NNISDIS--PVSSLTKL 329
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L S +VTD +K L +++TLE+L
Sbjct: 122 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSN-QVTD--LKPLANLTTLERL 178
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 179 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 233
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 234 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 263
>gi|371942110|gb|AEX60867.1| internaline [Listeria monocytogenes]
gi|371942112|gb|AEX60868.1| internaline [Listeria monocytogenes]
Length = 789
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|157130757|ref|XP_001661997.1| hypothetical protein AaeL_AAEL011861 [Aedes aegypti]
gi|108871790|gb|EAT36015.1| AAEL011861-PA [Aedes aegypti]
Length = 279
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSAL-WALTGMTCLKELDL 122
K + +EL EN + LR+L+++ C R+T +AL + + L+EL L
Sbjct: 132 KVTDDGVELIAEN------------LQKLRALDLSWCPRITDAALEYIACDLNQLEELTL 179
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP 175
RCV +TD G+ ++ ++ +L L+L D G+ L S++NL VL L G P
Sbjct: 180 DRCVHITDIGVGYISTMLSLSALFLRWCTQIRDFGLQHLCSMRNLQVLSLAGCP 233
>gi|223698748|gb|ACN19072.1| truncated internalin A [Listeria monocytogenes]
gi|223698961|gb|ACN19214.1| truncated internalin A [Listeria monocytogenes]
Length = 491
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 183
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 184 --LASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|219821363|gb|ACL37820.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDINPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 INPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|167861900|gb|ACA05649.1| InlA [Listeria monocytogenes]
gi|194326161|emb|CAQ77239.1| internalin A [Listeria monocytogenes]
gi|298360364|gb|ADI77761.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|427793023|gb|JAA61963.1| Putative f-box and leucine-rich repeat protein 14a, partial
[Rhipicephalus pulchellus]
Length = 372
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 65 HNAEAIELRGENSVDAEWMAYLGAFR--------YLRSLNVADCRRVTSSALWALT-GMT 115
HN ++ LR V +++L L SL + DC+++T AL ++ G+
Sbjct: 133 HNLRSLNLRSCRGVSDPGISHLAGINPNSAIGTLRLESLCLQDCQKLTDDALRFISIGLQ 192
Query: 116 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWL------SETGLT--ADGIALLSSLQNLS 167
L+ L+LS C VTDAG+KH ++ L +L L S+ GL A+G + +S+L ++S
Sbjct: 193 DLRSLNLSFCASVTDAGLKHAARMARLRELNLRSCDNISDLGLAYLAEGGSRISTL-DVS 251
Query: 168 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA-VLKMFPRLSFLNLAWTGVTK 226
D G +L + Q L +L L L VS+ G V + L L+L G
Sbjct: 252 FCDKVG---DQGLLHASQGLFQLRSLSLNACPVSDDGIGRVARSLGDLQTLHLGQCGRVT 308
Query: 227 LPNIS-------SLECLNLSNCT 242
+S L C++L CT
Sbjct: 309 DKGLSLIADHLKQLRCIDLYGCT 331
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 31/164 (18%)
Query: 88 AFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLS----ISTLE 143
+ LRSLN++ C VT + L M L+EL+L C ++D G+ +L ISTL+
Sbjct: 190 GLQDLRSLNLSFCASVTDAGLKHAARMARLRELNLRSCDNISDLGLAYLAEGGSRISTLD 249
Query: 144 KLWLSETG-----------------------LTADGIALLS-SLQNLSVLDLGGLP-VTD 178
+ + G ++ DGI ++ SL +L L LG VTD
Sbjct: 250 VSFCDKVGDQGLLHASQGLFQLRSLSLNACPVSDDGIGRVARSLGDLQTLHLGQCGRVTD 309
Query: 179 LVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLA 220
L + L +L +DL+G ++++ G L P L LNL
Sbjct: 310 KGLSLIADHLKQLRCIDLYGCTKITTVGLEKLMQLPNLGVLNLG 353
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 139/321 (43%), Gaps = 52/321 (16%)
Query: 92 LRSLNVADCRRVTSSAL--WALTGMTCLKELDLSRCVKVTDAGMKHLLS-ISTLEKLWLS 148
L SLN+ C +T + L + + L EL+LS C ++TD + + + LE+L L
Sbjct: 56 LESLNMIGCFNLTDAWLNHAFVQDVHSLTELNLSMCKQITDNSLGRIAQHLQGLERLDLG 115
Query: 149 E-TGLTADGIALLS-SLQNLSVLDLGGL-PVTDLVLRSLQVLT--------KLEYLDLWG 197
T +T G+ L++ L NL L+L V+D + L + +LE L L
Sbjct: 116 GCTDVTNTGLHLIAWGLHNLRSLNLRSCRGVSDPGISHLAGINPNSAIGTLRLESLCLQD 175
Query: 198 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC--TIDSILEGNENKAP 255
Q A L F+++ + L LNLS C D+ L+ A
Sbjct: 176 CQKLTDDA--------LRFISIG---------LQDLRSLNLSFCASVTDAGLKHAARMAR 218
Query: 256 LAKISLAGTTFINERE-AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH--------- 305
L +++L I++ A+L S +S LDVS FC + L H
Sbjct: 219 LRELNLRSCDNISDLGLAYLAEGGSRISTLDVS------FCDKVGDQGLLHASQGLFQLR 272
Query: 306 -LDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSG-TQ 362
L L++ + DD + VA +L+ L+L R + G+ ++A HL L + L G T+
Sbjct: 273 SLSLNACPVSDDGIGRVARSLGDLQTLHLGQCGRVTDKGLSLIADHLKQLRCIDLYGCTK 332
Query: 363 IDDYAISYMSMMPSLKFIDIS 383
I + + +P+L +++
Sbjct: 333 ITTVGLEKLMQLPNLGVLNLG 353
>gi|27574254|pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
gi|27574256|pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574257|pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574258|pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 31 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 88
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 89 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 141
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 142 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 198
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 199 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 252
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 253 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 310
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 311 LTYLTLYFNNISDIS--PVSSLTKL 333
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 127 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 182
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 183 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 237
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 238 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 267
>gi|16802477|ref|NP_463962.1| internalin A [Listeria monocytogenes EGD-e]
gi|386049359|ref|YP_005967350.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404282867|ref|YP_006683764.1| internalin A [Listeria monocytogenes SLCC2372]
gi|403399437|sp|P0DJM0.1|INLA_LISMO RecName: Full=Internalin-A; Flags: Precursor
gi|12054782|emb|CAC20628.1| internalin A [Listeria monocytogenes]
gi|16409810|emb|CAC98512.1| Internalin A [Listeria monocytogenes EGD-e]
gi|130774817|gb|ABO32421.1| InlA [Listeria monocytogenes]
gi|130774821|gb|ABO32423.1| InlA [Listeria monocytogenes]
gi|130774823|gb|ABO32424.1| InlA [Listeria monocytogenes]
gi|150371782|dbj|BAF65680.1| internalin A [Listeria monocytogenes]
gi|150371794|dbj|BAF65686.1| internalin A [Listeria monocytogenes]
gi|150371804|dbj|BAF65691.1| internalin A [Listeria monocytogenes]
gi|150371820|dbj|BAF65699.1| internalin A [Listeria monocytogenes]
gi|150371846|dbj|BAF65712.1| internalin A [Listeria monocytogenes]
gi|150371852|dbj|BAF65715.1| internalin A [Listeria monocytogenes]
gi|150371856|dbj|BAF65717.1| internalin A [Listeria monocytogenes]
gi|150371860|dbj|BAF65719.1| internalin A [Listeria monocytogenes]
gi|150371868|dbj|BAF65723.1| internalin A [Listeria monocytogenes]
gi|167861980|gb|ACA05689.1| InlA [Listeria monocytogenes]
gi|194239382|emb|CAQ76831.1| internalin A [Listeria monocytogenes]
gi|298359818|gb|ADI77488.1| internalin A [Listeria monocytogenes]
gi|298359832|gb|ADI77495.1| internalin A [Listeria monocytogenes]
gi|298360054|gb|ADI77606.1| internalin A [Listeria monocytogenes]
gi|298360128|gb|ADI77643.1| internalin A [Listeria monocytogenes]
gi|298360212|gb|ADI77685.1| internalin A [Listeria monocytogenes]
gi|298360216|gb|ADI77687.1| internalin A [Listeria monocytogenes]
gi|298360256|gb|ADI77707.1| internalin A [Listeria monocytogenes]
gi|298360522|gb|ADI77840.1| internalin A [Listeria monocytogenes]
gi|346423205|gb|AEO24730.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404232369|emb|CBY53772.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2372]
Length = 800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|298360550|gb|ADI77854.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|371942104|gb|AEX60864.1| internaline [Listeria monocytogenes]
Length = 790
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|387817978|ref|YP_005678323.1| hypothetical protein H04402_01777 [Clostridium botulinum H04402
065]
gi|322806020|emb|CBZ03587.1| internalin-like protein (LPXTG motif) Lmo0333 homolog [Clostridium
botulinum H04402 065]
Length = 1355
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 197/450 (43%), Gaps = 73/450 (16%)
Query: 39 AHLADSLLRHLIRRRLIFPSLLEVFKHNAEAI---ELRGENSVDAEWMAYLGAFRYLRSL 95
+ D +L IR LI ++K +I EL G VD + + + YL
Sbjct: 562 VNFGDKVLEREIRE-LINNYSEPIYKRQLSSITKLELSGRGIVDLQGLESMENLTYL--- 617
Query: 96 NVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD 155
D S + ++ + LK+L L + K+ +K + S+ LE+L LS L D
Sbjct: 618 ---DLSNNEISNIDSIKKLVNLKKLVLHKN-KI--GSIKSIESLKYLEELDLS-NNLIGD 670
Query: 156 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 215
I L L L+ LDL + + + SL L L+YL L+ +++S G LK L
Sbjct: 671 -ITALGGLSQLTRLDLSKNGI--VSINSLGSLINLQYLSLYENKIS-EGEEYLKKLYSLR 726
Query: 216 FLNLAWTGVTK----LPNISSLECLNLSNCTIDSILEGNENKAPLAKI--SLAGTTFINE 269
L L +GV+ L ++LE + + + D I+ + + LAKI + G +E
Sbjct: 727 ELYLKNSGVSNFDVTLAYYNNLEKKDFTTNS-DFIVFDEKLDSDLAKIIREILGK---DE 782
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
E ++ L++S ++SR L++SS + + + + N
Sbjct: 783 NTNIYKSEVDTITDLNLSEEAISR------------LNISSRLTNTNVINLDGI--QNFS 828
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLE------ILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
NL+ N R G G L G L NL L L G +I+ ++ Y+ + SL+++ ++
Sbjct: 829 NLHSINLR----GHGKLEG-LENLMPIRGLIKLDLQGREINYTSLYYIKYLTSLRYLYLN 883
Query: 384 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 443
N ++ G L+ L+NL L L+L +T +S+ ++ L + L L L
Sbjct: 884 NMNLTG-------------DLSFLENLTDLRVLDLSRTGISNISI--LDKLRNLSELYLG 928
Query: 444 NASLTDVSLHQLSSLSKLTNLSIRDAVLTN 473
++ D LSSL LTNL+ D V N
Sbjct: 929 GNNIID-----LSSLENLTNLAKLDLVENN 953
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 179/421 (42%), Gaps = 91/421 (21%)
Query: 114 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 173
+ +KELD G++++ + LEKL LS T + I+LL L NL +++
Sbjct: 354 LENIKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKCLINLKEVNISN 408
Query: 174 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 233
++D+ +L+ + YL+L + V+ V++ F + L ++ T + +P +SSL
Sbjct: 409 TSISDIT--ALKNSIYIRYLNLNETNVTT--LQVIEKFQYIERLYVSGTKINTVPQLSSL 464
Query: 234 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
L+LSNC I+ I +FIN Y+ L + ++ L
Sbjct: 465 LELDLSNCNINDI------------------SFINYLHNLTYLNVGKLKY---KSNILGN 503
Query: 294 FCFLTQMKALEHL----------DLSSSMIGDDSVEMVACVGANLRNLN---LSNTRFSS 340
F++ ++ LE+L D+ ++I +++ C N + LN + +
Sbjct: 504 ISFVSSLEKLEYLSIANTDVVNIDVLKNLINLRKLDITGCAQINTQVLNHVEIIGNEIVN 563
Query: 341 AGVGIL----------------AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
G +L L ++ L LSG I D + + M +L ++D+SN
Sbjct: 564 FGDKVLEREIRELINNYSEPIYKRQLSSITKLELSGRGIVD--LQGLESMENLTYLDLSN 621
Query: 385 TDIKGF--IQQVGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
+I I+++ LVL S+ ++++L +LE L+L + D T L +
Sbjct: 622 NEISNIDSIKKLVNLKKLVLHKNKIGSIKSIESLKYLEELDLSNNLIGDIT--ALGGLSQ 679
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKLTNL------------------SIRDAVLTNSGLGS 478
L L L + VS++ L SL L L S+R+ L NSG+ +
Sbjct: 680 LTRLDLSKNGI--VSINSLGSLINLQYLSLYENKISEGEEYLKKLYSLRELYLKNSGVSN 737
Query: 479 F 479
F
Sbjct: 738 F 738
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 66 NAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRC 125
N +I LRG + E + L R L L++ R + ++L+ + +T L+ L L+
Sbjct: 829 NLHSINLRGHGKL--EGLENLMPIRGLIKLDLQ-GREINYTSLYYIKYLTSLRYLYLNNM 885
Query: 126 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 185
D + L +++ L L LS TG++ I++L L+NLS L LGG + D L SL+
Sbjct: 886 NLTGD--LSFLENLTDLRVLDLSRTGIS--NISILDKLRNLSELYLGGNNIID--LSSLE 939
Query: 186 VLTKLEYLDLWGSQVSNRGAA---VLKMFPRLSFLNLAWTGVTKLPNISSL 233
LT L LDL V N L+ L +L L T K+ + S++
Sbjct: 940 NLTNLAKLDL----VENNDITSIYALRNLINLRYLTLPITNPKKIQDYSAV 986
>gi|158429248|pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 30 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 87
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 88 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 140
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 141 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 197
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 198 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 251
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 252 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 309
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 310 LTYLTLYFNNISDIS--PVSSLTKL 332
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 126 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 181
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 182 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 236
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 237 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 266
>gi|371942126|gb|AEX60875.1| internaline [Listeria monocytogenes]
Length = 790
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|290996875|ref|XP_002681007.1| leucine-rich repeat family protein [Naegleria gruberi]
gi|284094630|gb|EFC48263.1| leucine-rich repeat family protein [Naegleria gruberi]
Length = 398
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 165/374 (44%), Gaps = 56/374 (14%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G S+ E + ++G +L L + +C + ++ M+ L +L++S+ K
Sbjct: 63 GNCSIGEEDLKFIGEMNHLTELELCEC-LTGDKDIRPISRMSQLTKLNISKNAKY----- 116
Query: 134 KHLLSISTLEKLWLSETG---LTADGIALLSS-LQNLSVLDLGGLPVTDLVLRSLQVLTK 189
HL I +++L + E G + + LLS+ L+ L++L + + ++ L L +
Sbjct: 117 -HLSDIFDMKQLKILEIGENFIGDEQAELLSNHLKQLTILRINNNLIHSQGVKHLSKLDQ 175
Query: 190 LEYLDLWGSQVSNR-GAAVLKM-------FPRLSFLNLAWTGVTKLPNISSLECLNLSNC 241
L LDL G+ ++ G+ + KM +L+ + ++ N+ L L++SN
Sbjct: 176 LTELDLSGNAFNDTIGSEIAKMEQLKTLHVNKLARHRMGSRLGSQFGNLFQLTSLSISNN 235
Query: 242 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 301
I G+E ++ + T + E LY+ + + + + L+ +
Sbjct: 236 YI-----GDEGANEISNL-----TQLTE----LYVHGAEIGYRGARS--------LSVLH 273
Query: 302 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 361
L LD+S++ IGD+ V + + + L L + N R G +++ +P L L +S
Sbjct: 274 QLTKLDISTNHIGDEGVRLFKQL-SKLTELVVFNNRIGDVGAQLIS-EIPQLTSLVVSSN 331
Query: 362 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 421
QI + +S M LK++ I+ Q+G + +LS +N L R+ +
Sbjct: 332 QIGNEGAKSISQMSKLKYLSINGN-------QIGDQGAKLLS-----EMNQLRRIEVYGN 379
Query: 422 QVSDATLFPLSTFK 435
+S+ +F L K
Sbjct: 380 NISNE-IFQLFGIK 392
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 53/271 (19%)
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
S L+ L++S ++ + MK L+ L++ + IGD+ E+
Sbjct: 103 SQLTKLNISKNAKYHLSDIFDMKQLKILEIGENFIGDEQAEL------------------ 144
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
L+ HL L IL ++ I + ++S + L +D+S F +G+E
Sbjct: 145 -------LSNHLKQLTILRINNNLIHSQGVKHLSKLDQLTELDLSGN---AFNDTIGSEI 194
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 457
+ L L +N L R + S LF L++ LS+ N + D +++S+
Sbjct: 195 AKMEQLKTLH-VNKLARHRMGSRLGSQFGNLFQLTS------LSISNNYIGDEGANEISN 247
Query: 458 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL--QFCKM------HP 509
L++LT L + A + G S L LD+ + E L Q K+ +
Sbjct: 248 LTQLTELYVHGAEIGYRGARSLSVLHQLTKLDISTNHIGDEGVRLFKQLSKLTELVVFNN 307
Query: 510 RI---------EVWHELSVICPSDQIGSNGP 531
RI E+ S++ S+QIG+ G
Sbjct: 308 RIGDVGAQLISEIPQLTSLVVSSNQIGNEGA 338
>gi|158300505|ref|XP_320406.4| AGAP012123-PA [Anopheles gambiae str. PEST]
gi|157013191|gb|EAA00209.4| AGAP012123-PA [Anopheles gambiae str. PEST]
Length = 462
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 92 LRSLNVADCRRVTSSAL-WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
LR+L+++ C R+T +AL + + L+EL L RCV +TD G+ ++ ++ +L L+L
Sbjct: 331 LRALDLSWCPRITDAALEYIACDLNQLEELTLDRCVHITDIGVGYISTMLSLSALFLRWC 390
Query: 151 GLTAD-GIALLSSLQNLSVLDLGGLP 175
D G+ L S++NL VL L G P
Sbjct: 391 TQIRDFGLQHLCSMRNLQVLSLAGCP 416
>gi|51850115|dbj|BAD42399.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 1035
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 36/231 (15%)
Query: 297 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA---GVGILAGHLPNL 353
L+ ++ HL+ S + GD ++ + + LR+L+LS S+ + LAG LP L
Sbjct: 98 LSGLRDHPHLE-SVHLKGDFTLADLKALPTTLRHLDLSECTGSAKSFRAIAYLAG-LP-L 154
Query: 354 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 413
E L+++G +I D ++ PSLK ++ ++ G I GA L S T L
Sbjct: 155 ESLNVAGAEIGDGGARLLAANPSLKSLNAAS----GGISASGARM-LAESPT-------L 202
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV--- 470
E L+L Q + DA L+ + L HL++RN +TDV L+ L +L + + V
Sbjct: 203 ESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDVGTRALALNPALVSLDLGNLVTET 262
Query: 471 ---------------LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 506
+T G + RSLK L + G L +D + +
Sbjct: 263 GNQVEQDGYDKTANNITAQGAWALAQNRSLKSLSVQGNDLCGDDGVRALAR 313
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 117 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
++ LDLS C V++AG+ +L + L L LS+TG+ G L++ +L+ L+L G
Sbjct: 633 VRHLDLSGCTGSAVSEAGLAYLARL-PLASLDLSDTGIGNRGAQALAASASLTSLNLSGN 691
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 234
+ +L T L LD+ + + N GA L L+ L L TG+ +E
Sbjct: 692 GIGTAGAEALGRNTVLTALDISANPIRNAGAQALASSRSLTSLELRDTGIED----GGIE 747
Query: 235 CLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 293
L +N + S+ + GN+ ++++ A L+ L + L+
Sbjct: 748 AL-AANTVLRSLDISGND---------------LSDQSAAALAANRTLTSLKANGCGLTN 791
Query: 294 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 347
L ++++L L++ S+ IGD V +A A+LR+LNLS + G+ LA
Sbjct: 792 DMAQQLARIRSLRTLEVGSNSIGDAGVLTIA-RNASLRSLNLSRNSITPQGLYPLA 846
>gi|423638533|ref|ZP_17614185.1| hypothetical protein IK7_04941, partial [Bacillus cereus VD156]
gi|401270849|gb|EJR76868.1| hypothetical protein IK7_04941, partial [Bacillus cereus VD156]
Length = 853
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 341 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 346 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 390
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 391 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 436
>gi|404406915|ref|YP_006689630.1| internalin A [Listeria monocytogenes SLCC2376]
gi|130774829|gb|ABO32427.1| InlA [Listeria monocytogenes]
gi|167861972|gb|ACA05685.1| InlA [Listeria monocytogenes]
gi|194326147|emb|CAQ77232.1| internalin A [Listeria monocytogenes]
gi|404241064|emb|CBY62464.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|46390385|dbj|BAD15849.1| putative F-box protein [Oryza sativa Japonica Group]
gi|125581198|gb|EAZ22129.1| hypothetical protein OsJ_05792 [Oryza sativa Japonica Group]
Length = 660
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 57/295 (19%)
Query: 82 W-MAYLGAFRYLRSLNVADCRRVTSSALWALTGMT-CLKELDLSRCVKVTDAGMKHLL-S 138
W MA + LR ++V C VT+ AL A+ L++L +C +TDAG+K S
Sbjct: 355 WVMANAAGLQNLRCMSVTSCPGVTNLALAAIAKFCPSLRQLSFRKCGHMTDAGLKAFTES 414
Query: 139 ISTLEKLWLSET-GLTADGI-----------ALLSSLQNLSVLDLGGLPVTDLVLRSLQV 186
LE L L E G+T GI LS ++ + + D+ P + +SLQ
Sbjct: 415 ARLLESLQLEECNGVTLVGILDFLVNCGPKFRSLSLVKCMGIKDICSTPAQLPLCKSLQF 474
Query: 187 LT--------------------KLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVT 225
LT LE +DL G +V++RG L +N + G+
Sbjct: 475 LTIKDCPDFTDASLAVVGMVCPYLEQVDLSGLREVTDRGL--------LPLINSSEGGLV 526
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL-LSFL 284
K+ ++S C N+++ + ++++G+ L ++SL G + I + F E L+ L
Sbjct: 527 KV-DLSG--CKNITDAAVSTLVKGHGKS--LKQVSLEGCSKITDASLFAISENCTELAEL 581
Query: 285 DVSNSSLSRFCFLTQMKALEHLDL------SSSMIGDDSVEMVACVGANLRNLNL 333
D+S +S T + + +HL L S + SV + +G +L LNL
Sbjct: 582 DLSKCMVSDNGVAT-LASAKHLKLRVLSLSGCSKVTPKSVSFLGNMGQSLEGLNL 635
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 183/431 (42%), Gaps = 65/431 (15%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTC--LKELDLSRCVKVTDAGMKHLLSIST--LEKLWL 147
L SL V C V + L A+ G +C ++ L++ C ++ D G+ L+ +T L K+ L
Sbjct: 260 LLSLTVESCSGVGNDGLRAI-GRSCSKIQALNIKNCARIGDQGISSLVCSATASLTKIRL 318
Query: 148 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 207
+T +AL+ G VTDL L L V V+ RG V
Sbjct: 319 QGLNITDASLALIGYY---------GKAVTDLTLVRLPV-------------VAERGFWV 356
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 267
+ L NL VT P +++L ++ S+ + + K ++ AG
Sbjct: 357 MANAAGLQ--NLRCMSVTSCPGVTNLALAAIAK-FCPSLRQLSFRKC--GHMTDAGLKAF 411
Query: 268 NEREAF---LYIE----TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 320
E L +E +L+ LD + +F L+ +K + D+ S+ ++
Sbjct: 412 TESARLLESLQLEECNGVTLVGILDFLVNCGPKFRSLSLVKCMGIKDICST-----PAQL 466
Query: 321 VACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLK 378
C +L+ L + + F+ A + ++ P LE + LSG ++ D + +
Sbjct: 467 PLC--KSLQFLTIKDCPDFTDASLAVVGMVCPYLEQVDLSGLREVTDRGLLPLINSSEGG 524
Query: 379 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLS-TFKE 436
+ + + K TD +S + L++++LE ++++DA+LF +S E
Sbjct: 525 LVKVDLSGCKNI-------TDAAVSTLVKGHGKSLKQVSLEGCSKITDASLFAISENCTE 577
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 496
L L L ++D + +++L+ +L +R VL+ SG P+S+ L G L
Sbjct: 578 LAELDLSKCMVSD---NGVATLASAKHLKLR--VLSLSGCSKVT-PKSVSFLGNMGQSL- 630
Query: 497 TEDAILQFCKM 507
E LQFC M
Sbjct: 631 -EGLNLQFCNM 640
>gi|130774809|gb|ABO32417.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|71662333|ref|XP_818175.1| leucine-rich repeat protein (LRRP) [Trypanosoma cruzi strain CL
Brener]
gi|70883410|gb|EAN96324.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma cruzi]
Length = 415
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 16 AACQSGESVQKWRRQRRSLERLPA--HLADSLLRHLIRRRLIFPSLLEVFK-HNAEAIEL 72
A+C + E + W R RSL R+ A HL L R + LL + H E ++L
Sbjct: 143 ASCPTLEHL--WLRSCRSLTRVEALSHLHSLKSLDLSRTGVTDDGLLALTACHLLEEVDL 200
Query: 73 RGENSVDA-EWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDA 131
G + + A +M +G R L+ N +T A+ A+ T L LD++ C VT
Sbjct: 201 SGCDFICALPFMKNMGCLRVLKLRNSG----ITDRAISAIGAATALVHLDIAGCFLVTS- 255
Query: 132 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 191
+ L + LE + S G+ G+ LS NL L + V +L VL+KL+
Sbjct: 256 -LNPLGGLKRLEWMNTSWCGIRDGGVEGLSCCDNLEYLSMARCWDIHNV-NALGVLSKLQ 313
Query: 192 YLDLWGSQVSNRGAAVLKMFPRLSFLNLA 220
LDL G+ V + G A L L LNL+
Sbjct: 314 VLDLCGTNVDDEGIAGLSRCASLCSLNLS 342
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 110/276 (39%), Gaps = 72/276 (26%)
Query: 136 LLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 194
L S TLE LWL S LT + LS L +L LDL VTD L +L LE +D
Sbjct: 142 LASCPTLEHLWLRSCRSLTR--VEALSHLHSLKSLDLSRTGVTDDGLLALTACHLLEEVD 199
Query: 195 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA 254
L G L F+ N+ L L L N G ++A
Sbjct: 200 LSGCD----------FICALPFMK----------NMGCLRVLKLRN-------SGITDRA 232
Query: 255 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 314
++ I A T ++ A ++ TSL L +K LE ++ S I
Sbjct: 233 -ISAIG-AATALVHLDIAGCFLVTSLNP--------------LGGLKRLEWMNTSWCGIR 276
Query: 315 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD--------- 365
D VE ++C NL L+++ + V L G L L++L L GT +DD
Sbjct: 277 DGGVEGLSCCD-NLEYLSMARC-WDIHNVNAL-GVLSKLQVLDLCGTNVDDEGIAGLSRC 333
Query: 366 --------------YAISYMSMMPSLKFIDISNTDI 387
Y++ ++ MPSL+ +D+S T +
Sbjct: 334 ASLCSLNLSDCFCIYSVRTLAAMPSLREMDVSYTAV 369
>gi|219821282|gb|ACL37766.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L ++++L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISSLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|157868400|ref|XP_001682753.1| hypothetical protein LMJF_19_1640 [Leishmania major strain
Friedlin]
gi|68126208|emb|CAJ07269.1| hypothetical protein LMJF_19_1640 [Leishmania major strain
Friedlin]
Length = 673
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 171/403 (42%), Gaps = 72/403 (17%)
Query: 110 ALTGMTCLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTA------------DG 156
+ CLK L L C +++ G +L S S+L++ + G A G
Sbjct: 268 GIDACPCLKSLQLRECPRLSHLGWNQILNSQSSLQESSGQDGGCAALLSVSVFRCPAFQG 327
Query: 157 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV-----SNRGAAVLKMF 211
I LLS+ +L + ++ L +L+ LE LD+ G Q + RGA L+
Sbjct: 328 IGLLSAAPHLREFRAQRVRISSL--DALRECRHLELLDVGGCQQVCCIEALRGAKALRY- 384
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
L N A + + L ++LE +NLS C L+ E L ++ + T E
Sbjct: 385 --LDLSNTAVSDIGALSQCTALERVNLSGCLRLRSLDSLECCTELRELQASRTNI----E 438
Query: 272 AFLYIE-TSLLSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGD----------DSVE 319
+ + L +DVS ++L LT + L H+DLS + + D +SV
Sbjct: 439 TLIGLRLCRALKKVDVSGCAALRDAAALTHLSQLTHVDLSFTAVDDVSSLAYYSGLESVR 498
Query: 320 MVACV-------------GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDD 365
+ C LR+L+LSNT S + P LE L ++G T++ D
Sbjct: 499 LRGCRYLRDYSPPHNLEDAPPLRSLDLSNTSVCS--ISEWGRCPPRLEKLRMNGCTRLSD 556
Query: 366 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 425
IS + L+ +D+ NT + + L+ AL+ L R++ T++SD
Sbjct: 557 --ISVLQSSTGLRIVDLGNTSVHSI-------SPLISCAPALEEL----RMH-GCTELSD 602
Query: 426 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 468
++ L + L + L N S+ VS +L++ S+L L I D
Sbjct: 603 ISV--LQSASRLRVVDLDNTSVRSVSPLRLAA-SELEELRIND 642
>gi|405968131|gb|EKC33230.1| Slit-like protein 1 protein [Crassostrea gigas]
Length = 874
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 164/381 (43%), Gaps = 21/381 (5%)
Query: 91 YLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET 150
YLR L +AD V+ A + + + LD++ +T+ L+ L L
Sbjct: 130 YLRDLRIADGNLVSIED-DAFSSIPEITYLDITN-NSITEVSSSLFSRTLELQVLGLGRN 187
Query: 151 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 210
L++ A S L+ + VL L + + V SL L L+ L L G+ ++ +L
Sbjct: 188 PLSSVPKATFSVLRKVMVLTLDNAGLDNAVWFSLPNLHTLKDLQLQGNVITKLNKTILSN 247
Query: 211 FPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENKAPLA-KISLAGT 264
L L+L G+T+LP N++ L L+L+ + I G A + L+G
Sbjct: 248 LRYLQNLDLGNNGLTELPSDIFHNLNELRFLHLNQNKLQEIKNGTFMGLVNALNLDLSGN 307
Query: 265 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 324
I E E ++ + + LD+S ++L+R L + ++ L+L S+ I S +
Sbjct: 308 E-IKEIEKTVFYDLESVLKLDISENNLTRIPNLRMSRTVQWLNLCSNHIQKLSSGSFEGL 366
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--------- 375
+L +LN+S R G + H+P L+ L LS I I +
Sbjct: 367 -KHLEHLNISKNRLIDIKNGSFS-HIPRLKTLDLSFNNIQYIQIDAFDGLQLLSELILHN 424
Query: 376 -SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
L+ I + +K + + L + L + ++E +++ ++ + + F + +
Sbjct: 425 NVLETISVEFLPLKNLLSIDLSYNKLSMKLKSGIFPKNIESIDISDNKIDEVSQFAIKNY 484
Query: 435 KELIHLSLRNASLTDVSLHQL 455
+ L LSL+N LT + ++ L
Sbjct: 485 QTLRKLSLQNNKLTTIKMNDL 505
>gi|223698901|gb|ACN19174.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|167862002|gb|ACA05700.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|242044720|ref|XP_002460231.1| hypothetical protein SORBIDRAFT_02g025040 [Sorghum bicolor]
gi|241923608|gb|EER96752.1| hypothetical protein SORBIDRAFT_02g025040 [Sorghum bicolor]
Length = 1223
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 17/238 (7%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 195
L + LE+L LS LT + A + S +L LDL G ++ + S+ L +L YL L
Sbjct: 581 LCRLKNLERLALSNNSLTGEIPACIGSATSLGELDLSGNMLSGAIPSSIGSLAELRYLFL 640
Query: 196 WGSQVSNRGAAVLKMFPRLSFLNL---AWTGVT--KLPNI--SSLECLNLSNCTIDSILE 248
G+++S L + L ++L + TGV + P I ++L LNLS + L
Sbjct: 641 QGNKLSGAIPPSLGRYATLLVIDLSNNSLTGVIPDEFPGIAKTTLWTLNLSRNQLGGKLP 700
Query: 249 -GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEH 305
G N + KI L+ F E F + L+ LD+S++SL+ L ++K+LE
Sbjct: 701 TGLSNMQQVQKIDLSRNNF--NGEIFSLGDCIALTVLDLSHNSLAGDLPSTLDKLKSLES 758
Query: 306 LDLSSSMI-GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 362
LD+S++ + G+ + + C L+ LNLS F GV G N LS G +
Sbjct: 759 LDVSNNHLSGEIPMSLTDC--QMLKYLNLSYNDF--WGVVPSTGPFVNFGCLSYLGNR 812
>gi|148607492|gb|ABQ95522.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|112961667|gb|ABI28464.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFI 391
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 392 QQVGAE--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
+ G + + + +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTGLKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 108 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 163
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 164 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 218
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 219 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|423576853|ref|ZP_17552972.1| hypothetical protein II9_04074 [Bacillus cereus MSX-D12]
gi|401206603|gb|EJR13391.1| hypothetical protein II9_04074 [Bacillus cereus MSX-D12]
Length = 766
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 216 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTTLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 390 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 450 VSLHQLSSLSKLTNLSIR 467
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTTLVKM-----DNLDSLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|371942100|gb|AEX60862.1| internaline [Listeria monocytogenes]
Length = 789
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698619|gb|ACN18986.1| truncated internalin A [Listeria monocytogenes]
gi|223698691|gb|ACN19034.1| truncated internalin A [Listeria monocytogenes]
gi|223698706|gb|ACN19044.1| truncated internalin A [Listeria monocytogenes]
gi|223698715|gb|ACN19050.1| truncated internalin A [Listeria monocytogenes]
gi|223698781|gb|ACN19094.1| truncated internalin A [Listeria monocytogenes]
gi|223698784|gb|ACN19096.1| truncated internalin A [Listeria monocytogenes]
gi|223698814|gb|ACN19116.1| truncated internalin A [Listeria monocytogenes]
gi|223698838|gb|ACN19132.1| truncated internalin A [Listeria monocytogenes]
gi|223698844|gb|ACN19136.1| truncated internalin A [Listeria monocytogenes]
gi|223698850|gb|ACN19140.1| truncated internalin A [Listeria monocytogenes]
gi|223698856|gb|ACN19144.1| truncated internalin A [Listeria monocytogenes]
gi|223698880|gb|ACN19160.1| truncated internalin A [Listeria monocytogenes]
gi|223698958|gb|ACN19212.1| truncated internalin A [Listeria monocytogenes]
gi|223698967|gb|ACN19218.1| truncated internalin A [Listeria monocytogenes]
gi|223698970|gb|ACN19220.1| truncated internalin A [Listeria monocytogenes]
gi|223698973|gb|ACN19222.1| truncated internalin A [Listeria monocytogenes]
gi|223698982|gb|ACN19228.1| truncated internalin A [Listeria monocytogenes]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|126143308|gb|ABN80096.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|443428800|gb|AGC92199.1| truncated internalin A [Listeria monocytogenes]
gi|443428802|gb|AGC92200.1| truncated internalin A [Listeria monocytogenes]
gi|443428806|gb|AGC92202.1| truncated internalin A [Listeria monocytogenes]
gi|443428824|gb|AGC92211.1| truncated internalin A [Listeria monocytogenes]
gi|443428830|gb|AGC92214.1| truncated internalin A [Listeria monocytogenes]
gi|443428832|gb|AGC92215.1| truncated internalin A [Listeria monocytogenes]
gi|443428834|gb|AGC92216.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|371942136|gb|AEX60880.1| internaline [Listeria monocytogenes]
Length = 789
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698697|gb|ACN19038.1| truncated internalin A [Listeria monocytogenes]
gi|223698841|gb|ACN19134.1| truncated internalin A [Listeria monocytogenes]
gi|223698877|gb|ACN19158.1| truncated internalin A [Listeria monocytogenes]
gi|223698922|gb|ACN19188.1| truncated internalin A [Listeria monocytogenes]
Length = 406
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
L + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 LDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|219821360|gb|ACL37818.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|196046515|ref|ZP_03113740.1| putative internalin [Bacillus cereus 03BB108]
gi|196022699|gb|EDX61381.1| putative internalin [Bacillus cereus 03BB108]
Length = 759
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 383
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + +++D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEITDVT--PLSKMTQLKELHLPNNELKDIT 432
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L ++D VLT + + +K L+
Sbjct: 367 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 397
>gi|254828935|ref|ZP_05233622.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|130774797|gb|ABO32413.1| InlA [Listeria monocytogenes]
gi|130774811|gb|ABO32418.1| InlA [Listeria monocytogenes]
gi|194239388|emb|CAQ76834.1| internalin A [Listeria monocytogenes]
gi|258601346|gb|EEW14671.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|298360424|gb|ADI77791.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|220932817|ref|YP_002509725.1| hypothetical protein Hore_19830 [Halothermothrix orenii H 168]
gi|219994127|gb|ACL70730.1| leucine-rich repeat protein [Halothermothrix orenii H 168]
Length = 531
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 143/325 (44%), Gaps = 51/325 (15%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
L++LNVA + S L LT +T L LDL + D + L + L L L
Sbjct: 194 LKTLNVA---YNSISDLKPLTALTGLSHLDL-EANNIKD--ISPLRGLKKLTYLNLIRNE 247
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
LT G+ LSSL+ L VL L G + ++ SL L LE LD+ + +S A LK F
Sbjct: 248 LT--GVKHLSSLEGLQVLLLSGNDLRNIA--SLTRLVNLEKLDISDNNIS--VAPGLKEF 301
Query: 212 PRLSFLNLAWTGVTKLPNISSLECLNLS-----NCTIDSI--LEGN-------------- 250
L LN++ + + IS EC L NC I I L G+
Sbjct: 302 KGLKELNISGNPIDDINFIS--ECRKLERLLAFNCEIRDISPLRGHNSLKELFLHNNRIT 359
Query: 251 -----ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 305
E L ++ L+G + N + + L +LD+ L+ FL + +LE+
Sbjct: 360 DISPLEGLNTLERLDLSGNSIEN---VSVISGLNKLKYLDLEGCGLTAIEFLKDLGSLEY 416
Query: 306 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 365
L+L ++ I +E + NL+ L L N + G L NL++LSL+ QI++
Sbjct: 417 LELENNRIS--QIEPLKK-HINLKTLVLDNNQIKDIST---LGELMNLKVLSLNDNQIEN 470
Query: 366 YAISYMSMMPSLKFIDISNTDIKGF 390
I ++ + L+ + IS I+
Sbjct: 471 --IDSLTGLNQLEVLYISGNRIRNI 493
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 169/392 (43%), Gaps = 77/392 (19%)
Query: 136 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS------------ 183
L ++ LE+L++ E + + ++ L L+ L L + GLP L S
Sbjct: 107 LAHLTDLERLYIFENHI--EDLSPLGKLKELRELIIRGLPPYKKGLPSGKYSGHYIEDIS 164
Query: 184 -LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN----- 237
L L KLEYL L ++SN L P L LN+A+ ++ L +++L L+
Sbjct: 165 PLAGLVKLEYLKLSHQKISN--LETLTQLPNLKTLNVAYNSISDLKPLTALTGLSHLDLE 222
Query: 238 LSNCTIDSILEGNENKAPLAKI--SLAGTTFINEREAFLYIETS--------------LL 281
+N S L G + L I L G ++ E + S L
Sbjct: 223 ANNIKDISPLRGLKKLTYLNLIRNELTGVKHLSSLEGLQVLLLSGNDLRNIASLTRLVNL 282
Query: 282 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV------------------EMVAC 323
LD+S++++S L + K L+ L++S + I D + ++
Sbjct: 283 EKLDISDNNISVAPGLKEFKGLKELNISGNPIDDINFISECRKLERLLAFNCEIRDISPL 342
Query: 324 VGAN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 382
G N L+ L L N R + + L G L LE L LSG I++ +S +S + LK++D+
Sbjct: 343 RGHNSLKELFLHNNRITD--ISPLEG-LNTLERLDLSGNSIEN--VSVISGLNKLKYLDL 397
Query: 383 SNTDIKG--FIQQVGA------ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 434
+ F++ +G+ E + + + L+ +L+ L L+ Q+ D +ST
Sbjct: 398 EGCGLTAIEFLKDLGSLEYLELENNRISQIEPLKKHINLKTLVLDNNQIKD-----ISTL 452
Query: 435 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
EL++L + SL D + + SL+ L L +
Sbjct: 453 GELMNLKV--LSLNDNQIENIDSLTGLNQLEV 482
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 32/225 (14%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFS 339
L L+V+ +S+S LT + L HLDL ++ I D S G L LNL R
Sbjct: 194 LKTLNVAYNSISDLKPLTALTGLSHLDLEANNIKDIS----PLRGLKKLTYLNL--IRNE 247
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK--GFIQQVGAE 397
GV L+ L L++L LSG + + I+ ++ + +L+ +DIS+ +I +++
Sbjct: 248 LTGVKHLSS-LEGLQVLLLSGNDLRN--IASLTRLVNLEKLDISDNNISVAPGLKEFKGL 304
Query: 398 TDLVLSLTALQNLN------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
+L +S + ++N LERL ++ D + PL L L L N +TD+S
Sbjct: 305 KELNISGNPIDDINFISECRKLERLLAFNCEIRDIS--PLRGHNSLKELFLHNNRITDIS 362
Query: 452 LHQLSSLSKLTNLSIRDAVLTN----SGLGSFKPPRSLKLLDLHG 492
L L+ L L + + N SGL LK LDL G
Sbjct: 363 --PLEGLNTLERLDLSGNSIENVSVISGLN------KLKYLDLEG 399
>gi|219821396|gb|ACL37842.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|371942116|gb|AEX60870.1| internaline [Listeria monocytogenes]
Length = 789
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|46906689|ref|YP_013078.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|254932755|ref|ZP_05266114.1| internalin A [Listeria monocytogenes HPB2262]
gi|405748809|ref|YP_006672275.1| internalin A [Listeria monocytogenes ATCC 19117]
gi|405751670|ref|YP_006675135.1| internalin A [Listeria monocytogenes SLCC2378]
gi|417316727|ref|ZP_12103366.1| internalin A [Listeria monocytogenes J1-220]
gi|424713328|ref|YP_007014043.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|424822183|ref|ZP_18247196.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|50400895|sp|Q723K6.1|INLA_LISMF RecName: Full=Internalin-A; Flags: Precursor
gi|46879954|gb|AAT03255.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|130774757|gb|ABO32393.1| InlA [Listeria monocytogenes]
gi|130774763|gb|ABO32396.1| InlA [Listeria monocytogenes]
gi|130774781|gb|ABO32405.1| InlA [Listeria monocytogenes]
gi|130774785|gb|ABO32407.1| InlA [Listeria monocytogenes]
gi|130774789|gb|ABO32409.1| InlA [Listeria monocytogenes]
gi|167861870|gb|ACA05634.1| InlA [Listeria monocytogenes]
gi|167861880|gb|ACA05639.1| InlA [Listeria monocytogenes]
gi|167861882|gb|ACA05640.1| InlA [Listeria monocytogenes]
gi|167861884|gb|ACA05641.1| InlA [Listeria monocytogenes]
gi|167861886|gb|ACA05642.1| InlA [Listeria monocytogenes]
gi|167861896|gb|ACA05647.1| InlA [Listeria monocytogenes]
gi|167861898|gb|ACA05648.1| InlA [Listeria monocytogenes]
gi|167861910|gb|ACA05654.1| InlA [Listeria monocytogenes]
gi|167861912|gb|ACA05655.1| InlA [Listeria monocytogenes]
gi|167861952|gb|ACA05675.1| InlA [Listeria monocytogenes]
gi|167861958|gb|ACA05678.1| InlA [Listeria monocytogenes]
gi|167861960|gb|ACA05679.1| InlA [Listeria monocytogenes]
gi|167861966|gb|ACA05682.1| InlA [Listeria monocytogenes]
gi|167861988|gb|ACA05693.1| InlA [Listeria monocytogenes]
gi|167861996|gb|ACA05697.1| InlA [Listeria monocytogenes]
gi|167862008|gb|ACA05703.1| InlA [Listeria monocytogenes]
gi|167862010|gb|ACA05704.1| InlA [Listeria monocytogenes]
gi|167862014|gb|ACA05706.1| InlA [Listeria monocytogenes]
gi|167862016|gb|ACA05707.1| InlA [Listeria monocytogenes]
gi|194239380|emb|CAQ76830.1| internalin A [Listeria monocytogenes]
gi|194239394|emb|CAQ76837.1| internalin A [Listeria monocytogenes]
gi|194326167|emb|CAQ77242.1| internalin A [Listeria monocytogenes]
gi|223006786|gb|ACM69350.1| internalin A [Listeria monocytogenes]
gi|223006788|gb|ACM69351.1| internalin A [Listeria monocytogenes]
gi|223006798|gb|ACM69356.1| internalin A [Listeria monocytogenes]
gi|223006804|gb|ACM69359.1| internalin A [Listeria monocytogenes]
gi|223006810|gb|ACM69362.1| internalin A [Listeria monocytogenes]
gi|293584308|gb|EFF96340.1| internalin A [Listeria monocytogenes HPB2262]
gi|294358391|gb|ADE73848.1| InlA [Listeria monocytogenes]
gi|294358403|gb|ADE73854.1| InlA [Listeria monocytogenes]
gi|298359884|gb|ADI77521.1| internalin A [Listeria monocytogenes]
gi|298359898|gb|ADI77528.1| internalin A [Listeria monocytogenes]
gi|298359902|gb|ADI77530.1| internalin A [Listeria monocytogenes]
gi|298359908|gb|ADI77533.1| internalin A [Listeria monocytogenes]
gi|298359940|gb|ADI77549.1| internalin A [Listeria monocytogenes]
gi|298359948|gb|ADI77553.1| internalin A [Listeria monocytogenes]
gi|298360056|gb|ADI77607.1| internalin A [Listeria monocytogenes]
gi|298360094|gb|ADI77626.1| internalin A [Listeria monocytogenes]
gi|298360148|gb|ADI77653.1| internalin A [Listeria monocytogenes]
gi|298360270|gb|ADI77714.1| internalin A [Listeria monocytogenes]
gi|298360288|gb|ADI77723.1| internalin A [Listeria monocytogenes]
gi|298360324|gb|ADI77741.1| internalin A [Listeria monocytogenes]
gi|298360326|gb|ADI77742.1| internalin A [Listeria monocytogenes]
gi|298360350|gb|ADI77754.1| internalin A [Listeria monocytogenes]
gi|298360362|gb|ADI77760.1| internalin A [Listeria monocytogenes]
gi|298360456|gb|ADI77807.1| internalin A [Listeria monocytogenes]
gi|298360480|gb|ADI77819.1| internalin A [Listeria monocytogenes]
gi|298360508|gb|ADI77833.1| internalin A [Listeria monocytogenes]
gi|298360520|gb|ADI77839.1| internalin A [Listeria monocytogenes]
gi|298360554|gb|ADI77856.1| internalin A [Listeria monocytogenes]
gi|298360632|gb|ADI77895.1| internalin A [Listeria monocytogenes]
gi|298360634|gb|ADI77896.1| internalin A [Listeria monocytogenes]
gi|298360662|gb|ADI77910.1| internalin A [Listeria monocytogenes]
gi|328475915|gb|EGF46639.1| internalin A [Listeria monocytogenes J1-220]
gi|332310863|gb|EGJ23958.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|340052073|emb|CBY84388.1| internalin A [Listeria monocytogenes]
gi|340052075|emb|CBY84389.1| internalin A [Listeria monocytogenes]
gi|404218009|emb|CBY69373.1| internalin A (LPXTG motif) [Listeria monocytogenes ATCC 19117]
gi|404220870|emb|CBY72233.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012512|emb|CCO63052.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|443428812|gb|AGC92205.1| internalin A [Listeria monocytogenes]
gi|443428814|gb|AGC92206.1| internalin A [Listeria monocytogenes]
gi|443428816|gb|AGC92207.1| internalin A [Listeria monocytogenes]
gi|443428818|gb|AGC92208.1| internalin A [Listeria monocytogenes]
gi|443428826|gb|AGC92212.1| internalin A [Listeria monocytogenes]
gi|443428836|gb|AGC92217.1| internalin A [Listeria monocytogenes]
gi|443428840|gb|AGC92219.1| internalin A [Listeria monocytogenes]
gi|443428852|gb|AGC92225.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|313485075|gb|ADR53008.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|219821330|gb|ACL37798.1| internalin A [Listeria monocytogenes]
gi|219821348|gb|ACL37810.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|47092503|ref|ZP_00230292.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|417314487|ref|ZP_12101186.1| internalin A [Listeria monocytogenes J1816]
gi|47019095|gb|EAL09839.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|130774783|gb|ABO32406.1| InlA [Listeria monocytogenes]
gi|130774787|gb|ABO32408.1| InlA [Listeria monocytogenes]
gi|167861878|gb|ACA05638.1| InlA [Listeria monocytogenes]
gi|167861926|gb|ACA05662.1| InlA [Listeria monocytogenes]
gi|194239406|emb|CAQ76843.1| internalin A [Listeria monocytogenes]
gi|223006800|gb|ACM69357.1| internalin A [Listeria monocytogenes]
gi|223006808|gb|ACM69361.1| internalin A [Listeria monocytogenes]
gi|294358399|gb|ADE73852.1| InlA [Listeria monocytogenes]
gi|298359958|gb|ADI77558.1| internalin A [Listeria monocytogenes]
gi|298359988|gb|ADI77573.1| internalin A [Listeria monocytogenes]
gi|298360010|gb|ADI77584.1| internalin A [Listeria monocytogenes]
gi|298360208|gb|ADI77683.1| internalin A [Listeria monocytogenes]
gi|298360370|gb|ADI77764.1| internalin A [Listeria monocytogenes]
gi|298360402|gb|ADI77780.1| internalin A [Listeria monocytogenes]
gi|298360472|gb|ADI77815.1| internalin A [Listeria monocytogenes]
gi|298360544|gb|ADI77851.1| internalin A [Listeria monocytogenes]
gi|298360592|gb|ADI77875.1| internalin A [Listeria monocytogenes]
gi|328467733|gb|EGF38785.1| internalin A [Listeria monocytogenes J1816]
gi|443428820|gb|AGC92209.1| truncated internalin A [Listeria monocytogenes]
gi|443428844|gb|AGC92221.1| truncated internalin A [Listeria monocytogenes]
gi|443428846|gb|AGC92222.1| truncated internalin A [Listeria monocytogenes]
gi|443428850|gb|AGC92224.1| truncated internalin A [Listeria monocytogenes]
gi|443428854|gb|AGC92226.1| truncated internalin A [Listeria monocytogenes]
gi|443428856|gb|AGC92227.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|376265270|ref|YP_005117982.1| internalin [Bacillus cereus F837/76]
gi|364511070|gb|AEW54469.1| internalin, putative [Bacillus cereus F837/76]
Length = 759
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 216 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 271
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 272 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 331
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 332 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 391
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 383
Query: 392 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 451
V L+ ++ + LE L + + +++D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEITDVT--PLSKMTQLKELHLPNNELKDIT 432
Query: 452 LHQLSSLSKLTNLSIR 467
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L ++D VLT + + +K L+
Sbjct: 367 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 397
>gi|298359896|gb|ADI77527.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|167861908|gb|ACA05653.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|167861906|gb|ACA05652.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|255028812|ref|ZP_05300763.1| internalin A [Listeria monocytogenes LO28]
Length = 502
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 53 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 110
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 111 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 163
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 164 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 220
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 221 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 274
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 275 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 332
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 333 LTYLTLYFNNISDIS--PVSSLTKL 355
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 149 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 204
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 205 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 260
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 261 --LASLTNLTDLDLANNQISNLAPLSGLTKL 289
>gi|223698700|gb|ACN19040.1| truncated internalin A [Listeria monocytogenes]
Length = 599
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 204 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 262
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 263 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 299
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 300 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 358
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 359 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 410
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 411 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 461
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|219821342|gb|ACL37806.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLTGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|219821339|gb|ACL37804.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|449087282|ref|YP_007419723.1| hypothetical protein HD73_0623 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|449021039|gb|AGE76202.1| hypothetical protein HD73_0623 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 991
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 341 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|322952092|gb|ADX21045.1| internalin A [Listeria monocytogenes]
gi|322952094|gb|ADX21046.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|219821318|gb|ACL37790.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|219821264|gb|ACL37754.1| internalin A [Listeria monocytogenes]
gi|219821306|gb|ACL37782.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|85679224|gb|ABC72028.1| InlA [Listeria monocytogenes]
Length = 794
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 150
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 240
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 353 IS--PVSSLTKL 362
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 156 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 211
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 212 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 266
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 267 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 296
>gi|219821309|gb|ACL37784.1| internalin A [Listeria monocytogenes]
gi|219821393|gb|ACL37840.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|223006796|gb|ACM69355.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|219821366|gb|ACL37822.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|112961697|gb|ABI28484.1| internalin A [Listeria monocytogenes]
gi|112961709|gb|ABI28492.1| internalin A [Listeria monocytogenes]
gi|112961730|gb|ABI28506.1| internalin A [Listeria monocytogenes]
gi|112961760|gb|ABI28526.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|322952096|gb|ADX21047.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|112961694|gb|ABI28482.1| internalin A [Listeria monocytogenes]
gi|112961706|gb|ABI28490.1| internalin A [Listeria monocytogenes]
gi|112961763|gb|ABI28528.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|298359764|gb|ADI77461.1| truncated internalin A [Listeria monocytogenes]
gi|298359862|gb|ADI77510.1| truncated internalin A [Listeria monocytogenes]
gi|298360070|gb|ADI77614.1| truncated internalin A [Listeria monocytogenes]
gi|298360108|gb|ADI77633.1| truncated internalin A [Listeria monocytogenes]
gi|298360174|gb|ADI77666.1| truncated internalin A [Listeria monocytogenes]
gi|298360196|gb|ADI77677.1| truncated internalin A [Listeria monocytogenes]
gi|298360268|gb|ADI77713.1| truncated internalin A [Listeria monocytogenes]
gi|298360290|gb|ADI77724.1| truncated internalin A [Listeria monocytogenes]
gi|298360536|gb|ADI77847.1| truncated internalin A [Listeria monocytogenes]
gi|298360608|gb|ADI77883.1| truncated internalin A [Listeria monocytogenes]
gi|298360658|gb|ADI77908.1| truncated internalin A [Listeria monocytogenes]
gi|298360684|gb|ADI77921.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFI 391
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 392 QQVGAE--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
+ G + + + +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTGLKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698883|gb|ACN19162.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 9 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 66
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 67 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 105
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 106 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 156
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 157 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 210
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 211 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 268
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 269 IS--PVSSLTKL 278
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|219821279|gb|ACL37764.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|29423714|gb|AAO73555.1| internalin A [Listeria monocytogenes]
Length = 743
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 37 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 94
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 95 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 133
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 134 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 184
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 185 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 238
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 239 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 296
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 297 IS--PVSSLTKL 306
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 100 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 155
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 156 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 210
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 211 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 240
>gi|229195625|ref|ZP_04322391.1| Internalin [Bacillus cereus m1293]
gi|228587874|gb|EEK45926.1| Internalin [Bacillus cereus m1293]
Length = 772
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 216 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTTLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 390
Query: 390 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 391 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 437
Query: 450 VSLHQLSSLSKLTNLSIR 467
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTTLVKM-----DNLDSLDLSNNKI 304
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L ++D VLT + + +K L+
Sbjct: 374 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 404
>gi|112961619|gb|ABI28432.1| internalin A [Listeria monocytogenes]
gi|112961637|gb|ABI28444.1| internalin A [Listeria monocytogenes]
gi|112961655|gb|ABI28456.1| internalin A [Listeria monocytogenes]
gi|112961658|gb|ABI28458.1| internalin A [Listeria monocytogenes]
gi|112961766|gb|ABI28530.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|357619268|gb|EHJ71912.1| hypothetical protein KGM_06037 [Danaus plexippus]
Length = 453
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 64 KHNAEAIELRGENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSAL-WALTGMTCLKELDL 122
K E +EL EN LRSL+++ C RVT +AL + + L+EL L
Sbjct: 306 KVTDEGVELLAEN------------LPRLRSLDLSWCPRVTDNALEYIACDLNQLEELTL 353
Query: 123 SRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLV 180
RCV +TD G+ ++ ++ +L L+L D G+ L +++L +L L G P +T
Sbjct: 354 DRCVHITDIGVGYISTMQSLAALFLRWCSQVRDFGVQHLCGMRSLQLLSLAGCPLLTSGG 413
Query: 181 LRSLQVLTKLEYLDL 195
L SL L +L L+L
Sbjct: 414 LSSLIQLRQLRELEL 428
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 338 FSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSM-MPSLKFIDISNTDIKGFIQQVG 395
++ GV + LPNL +LSLSG +++ D + ++ +P L+ +D+S + +V
Sbjct: 281 LTNHGVVNIVHSLPNLTVLSLSGCSKVTDEGVELLAENLPRLRSLDLS------WCPRV- 333
Query: 396 AETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLH 453
TD L A +LN LE L L++ ++D + +ST + L L LR S + D +
Sbjct: 334 --TDNALEYIAC-DLNQLEELTLDRCVHITDIGVGYISTMQSLAALFLRWCSQVRDFGVQ 390
Query: 454 QLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 490
L + L LS+ +LT+ GL S R L+ L+L
Sbjct: 391 HLCGMRSLQLLSLAGCPLLTSGGLSSLIQLRQLRELEL 428
>gi|219821354|gb|ACL37814.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPIAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|219821351|gb|ACL37812.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|371942144|gb|AEX60884.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|340052071|emb|CBY84387.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|313485065|gb|ADR53005.1| InlA [Listeria monocytogenes]
Length = 801
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698610|gb|ACN18980.1| internalin A [Listeria monocytogenes]
gi|223698616|gb|ACN18984.1| internalin A [Listeria monocytogenes]
gi|223698631|gb|ACN18994.1| internalin A [Listeria monocytogenes]
gi|223698637|gb|ACN18998.1| internalin A [Listeria monocytogenes]
gi|223698640|gb|ACN19000.1| internalin A [Listeria monocytogenes]
gi|223698649|gb|ACN19006.1| internalin A [Listeria monocytogenes]
gi|223698652|gb|ACN19008.1| internalin A [Listeria monocytogenes]
gi|223698661|gb|ACN19014.1| internalin A [Listeria monocytogenes]
gi|223698667|gb|ACN19018.1| internalin A [Listeria monocytogenes]
gi|223698676|gb|ACN19024.1| internalin A [Listeria monocytogenes]
gi|223698679|gb|ACN19026.1| internalin A [Listeria monocytogenes]
gi|223698685|gb|ACN19030.1| internalin A [Listeria monocytogenes]
gi|223698688|gb|ACN19032.1| internalin A [Listeria monocytogenes]
gi|223698709|gb|ACN19046.1| internalin A [Listeria monocytogenes]
gi|223698721|gb|ACN19054.1| internalin A [Listeria monocytogenes]
gi|223698724|gb|ACN19056.1| internalin A [Listeria monocytogenes]
gi|223698727|gb|ACN19058.1| internalin A [Listeria monocytogenes]
gi|223698730|gb|ACN19060.1| internalin A [Listeria monocytogenes]
gi|223698733|gb|ACN19062.1| internalin A [Listeria monocytogenes]
gi|223698742|gb|ACN19068.1| internalin A [Listeria monocytogenes]
gi|223698763|gb|ACN19082.1| internalin A [Listeria monocytogenes]
gi|223698790|gb|ACN19100.1| internalin A [Listeria monocytogenes]
gi|223698808|gb|ACN19112.1| internalin A [Listeria monocytogenes]
gi|223698811|gb|ACN19114.1| internalin A [Listeria monocytogenes]
gi|223698823|gb|ACN19122.1| internalin A [Listeria monocytogenes]
gi|223698853|gb|ACN19142.1| internalin A [Listeria monocytogenes]
gi|223698874|gb|ACN19156.1| internalin A [Listeria monocytogenes]
gi|223698889|gb|ACN19166.1| internalin A [Listeria monocytogenes]
gi|223698949|gb|ACN19206.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 9 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 66
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 67 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 105
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 106 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 156
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 157 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 210
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 211 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 268
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 269 IS--PVSSLTKL 278
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|130774769|gb|ABO32399.1| InlA [Listeria monocytogenes]
gi|130774773|gb|ABO32401.1| InlA [Listeria monocytogenes]
gi|167861932|gb|ACA05665.1| InlA [Listeria monocytogenes]
gi|167861992|gb|ACA05695.1| InlA [Listeria monocytogenes]
gi|167861994|gb|ACA05696.1| InlA [Listeria monocytogenes]
gi|167861998|gb|ACA05698.1| InlA [Listeria monocytogenes]
gi|167862004|gb|ACA05701.1| InlA [Listeria monocytogenes]
gi|167862034|gb|ACA05716.1| InlA [Listeria monocytogenes]
gi|194326169|emb|CAQ77243.1| internalin A [Listeria monocytogenes]
gi|298359894|gb|ADI77526.1| internalin A [Listeria monocytogenes]
gi|298360034|gb|ADI77596.1| internalin A [Listeria monocytogenes]
gi|298360110|gb|ADI77634.1| internalin A [Listeria monocytogenes]
gi|298360112|gb|ADI77635.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|423531450|ref|ZP_17507895.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB1-1]
gi|402444333|gb|EJV76220.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB1-1]
Length = 1016
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 341 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|294358397|gb|ADE73851.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|196229523|ref|ZP_03128388.1| hypothetical protein CfE428DRAFT_1553 [Chthoniobacter flavus
Ellin428]
gi|196226755|gb|EDY21260.1| hypothetical protein CfE428DRAFT_1553 [Chthoniobacter flavus
Ellin428]
Length = 582
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 139/353 (39%), Gaps = 44/353 (12%)
Query: 147 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 206
L ET LT A+L SL + L L G V D V+ L+ L+ L L G++ S G A
Sbjct: 215 LDETPLTTADYAILDSLSEVPELTLSGTAVKDSVMEKLRPFHTLKSLTLNGAKPSPAGYA 274
Query: 207 VLKMFPRLSFLNLAWTGVTKLPNISSLEC-----LNLSNCTI-DSILEGNENKAPLAKIS 260
VL P L L L T + +C L L+N TI D+ L +I
Sbjct: 275 VLPSLPELRDLQLNDTDTKDEAMKTVFQCRKLQHLRLANLTITDAAFADIGKLTALEEIG 334
Query: 261 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM-------KALEHLDLSSSMI 313
L I + E L + L F L+ M K LE + + ++ +
Sbjct: 335 LTALDKIGSPAFAHFPECRALKRV-----YLGGFIVLSGMIENLGKCKDLEAITMPAAGL 389
Query: 314 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMS 372
D V + + L++L+LSN+ + A + H L LSLS ++D +
Sbjct: 390 KDADVAPLGTL-MKLKSLDLSNSAVTGAFIDSWQQH-SQLTSLSLSNAAGVNDSTCKEIE 447
Query: 373 -MMPSLKFIDISNTDIKGF------------------IQQVGAETDLVLSLTALQNLNHL 413
P L+ + + GF + G D V L+ + L
Sbjct: 448 HTFPKLEQLTV-KIAASGFSSEGVAALARLRALRSVRFEGDGFNDDCVSELSHCETLTS- 505
Query: 414 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
L++ + Q+++A + L+ + L LSL +TDV++ + L N+ I
Sbjct: 506 --LSIVKAQLTEAGVVALARYPHLADLSLNYPPITDVAMKAFARCKDLKNIRI 556
>gi|402553188|ref|YP_006594459.1| internalin [Bacillus cereus FRI-35]
gi|401794398|gb|AFQ08257.1| internalin [Bacillus cereus FRI-35]
Length = 760
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 216 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLKQ------LKHLALRGNEF--- 276
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPIVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 390 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 450 VSLHQLSSLSKLTNLSIR 467
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPIVKM-----DNLDSLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|223698892|gb|ACN19168.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 152/317 (47%), Gaps = 55/317 (17%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 213
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 7 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 61
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 62 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 105
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 106 -------LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 151
Query: 334 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 152 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 205
Query: 393 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 206 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 263
Query: 445 ASLTDVSLHQLSSLSKL 461
+++D+S +SSL+KL
Sbjct: 264 NNISDIS--PVSSLTKL 278
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|130774791|gb|ABO32410.1| InlA [Listeria monocytogenes]
gi|298360240|gb|ADI77699.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|219821294|gb|ACL37774.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|112961646|gb|ABI28450.1| internalin A [Listeria monocytogenes]
gi|112961721|gb|ABI28500.1| internalin A [Listeria monocytogenes]
gi|112961757|gb|ABI28524.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|22347552|gb|AAM95921.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 95
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 134
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 298 IS--PVSSLTKL 307
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 104 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 159
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 160 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 213
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 214 ASLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|149674|gb|AAA25289.1| internalin [Listeria monocytogenes]
gi|22347564|gb|AAM95927.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 95
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 298 IS--PVSSLTKL 307
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 101 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 156
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 157 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 211
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 212 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|423387697|ref|ZP_17364949.1| hypothetical protein ICE_05439, partial [Bacillus cereus BAG1X1-2]
gi|401627891|gb|EJS45747.1| hypothetical protein ICE_05439, partial [Bacillus cereus BAG1X1-2]
Length = 865
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 341 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|371942076|gb|AEX60850.1| internaline [Listeria monocytogenes]
gi|371942078|gb|AEX60851.1| internaline [Listeria monocytogenes]
gi|371942082|gb|AEX60853.1| internaline [Listeria monocytogenes]
Length = 789
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|313485048|gb|ADR52999.1| InlA [Listeria monocytogenes]
gi|313485083|gb|ADR53012.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|219821288|gb|ACL37770.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|112959444|gb|ABI27249.1| truncated internalin A [Listeria monocytogenes]
gi|112959490|gb|ABI27272.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFI 391
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 392 QQVGAE--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
+ G + + + +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTGLKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 291 IS--PVSSLTKL 300
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 94 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 149
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 150 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 204
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 205 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 234
>gi|22347544|gb|AAM95917.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 95
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 298 IS--PVSSLTKL 307
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 105 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 160
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 161 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 214
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 215 SLTNLTDLDLANNQISNLAPLSGLTKL 241
>gi|423606867|ref|ZP_17582760.1| hypothetical protein IIK_03448 [Bacillus cereus VD102]
gi|401241057|gb|EJR47449.1| hypothetical protein IIK_03448 [Bacillus cereus VD102]
Length = 766
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 216 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 269
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 270 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 329
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 330 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 389
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 390 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 450 VSLHQLSSLSKLTNLSIR 467
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 338
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 339 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 458
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 459 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 489
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|112961610|gb|ABI28426.1| internalin A [Listeria monocytogenes]
gi|112961613|gb|ABI28428.1| internalin A [Listeria monocytogenes]
gi|112961625|gb|ABI28436.1| internalin A [Listeria monocytogenes]
gi|112961628|gb|ABI28438.1| internalin A [Listeria monocytogenes]
gi|112961631|gb|ABI28440.1| internalin A [Listeria monocytogenes]
gi|112961634|gb|ABI28442.1| internalin A [Listeria monocytogenes]
gi|112961670|gb|ABI28466.1| internalin A [Listeria monocytogenes]
gi|112961673|gb|ABI28468.1| internalin A [Listeria monocytogenes]
gi|112961676|gb|ABI28470.1| internalin A [Listeria monocytogenes]
gi|112961688|gb|ABI28478.1| internalin A [Listeria monocytogenes]
gi|112961703|gb|ABI28488.1| internalin A [Listeria monocytogenes]
gi|112961712|gb|ABI28494.1| internalin A [Listeria monocytogenes]
gi|112961715|gb|ABI28496.1| internalin A [Listeria monocytogenes]
gi|112961724|gb|ABI28502.1| internalin A [Listeria monocytogenes]
gi|112961733|gb|ABI28508.1| internalin A [Listeria monocytogenes]
gi|112961736|gb|ABI28510.1| internalin A [Listeria monocytogenes]
gi|112961739|gb|ABI28512.1| internalin A [Listeria monocytogenes]
gi|112961742|gb|ABI28514.1| internalin A [Listeria monocytogenes]
gi|112961745|gb|ABI28516.1| internalin A [Listeria monocytogenes]
gi|112961754|gb|ABI28522.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|431892162|gb|ELK02609.1| F-box/LRR-repeat protein 14 [Pteropus alecto]
Length = 412
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
LR LN++ C ++ + L L+ M L+ L+L C ++D G+ HL + L LS
Sbjct: 230 LRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL----AMGSLRLSGLD 285
Query: 152 LTADGI-ALLSSLQNLSVLDLGG-LPVTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAV 207
++ DGI ++ + L L++G + +TD L + + L++L +DL+G ++++ RG
Sbjct: 286 VSDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLER 345
Query: 208 LKMFPRLSFLNLAWTGVTKLPNISS 232
+ P L LNL +T +SS
Sbjct: 346 ITQLPCLKVLNLGLWQMTDSEKVSS 370
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 33/309 (10%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLL--SISTLEKLWL 147
R +R + + RR S + + GM ++ L+LS C +TD G+ H IS+L L L
Sbjct: 68 RGIRRVQILSLRRSLS---YVIQGMANIESLNLSGCYNLTDNGLGHAFVQEISSLRALNL 124
Query: 148 SETGLTADGI--ALLSSLQNLSVLDLGG---LPVTDLVLRSLQVLTKLEYLDLWGSQ-VS 201
S D + L+ L VL+LGG + T L+L + L +L+ L+L + +S
Sbjct: 125 SLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWG-LQRLKSLNLRSCRHLS 183
Query: 202 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE-----NKAPL 256
+ G L R A G L ++ +C L++ ++ I G N +
Sbjct: 184 DVGIGHLAGMTR-----SAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFC 238
Query: 257 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 316
IS AG ++ + + +L S ++S++ + A+ L LS + DD
Sbjct: 239 GGISDAGLLHLSHMGSLRSL--NLRSCDNISDTGIMHL-------AMGSLRLSGLDVSDD 289
Query: 317 SVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMM 374
+ + LR LN+ R + G+ ++A HL L + L G T+I + ++ +
Sbjct: 290 GINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQL 349
Query: 375 PSLKFIDIS 383
P LK +++
Sbjct: 350 PCLKVLNLG 358
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 161/352 (45%), Gaps = 44/352 (12%)
Query: 66 NAEAIELRGENSVDAEWM--AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDL 122
N E++ L G ++ + A++ LR+LN++ C+++T S+L + + L+ L+L
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEISSLRALNLSLCKQITDSSLGRIAQYLKGLEVLEL 150
Query: 123 SRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLV 180
C +T+ G+ + + L+ L L +D GI L+ + + G L + L
Sbjct: 151 GGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAA--EGCLGLEQLT 208
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTKLPNISSLECLNLS 239
L+ Q LT L + +RG L++ LSF ++ G+ L ++ SL LNL
Sbjct: 209 LQDCQKLTDLSLKHI------SRGLTGLRLL-NLSFCGGISDAGLLHLSHMGSLRSLNLR 261
Query: 240 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 299
+C D+I + + + L+G LDVS+ ++R + Q
Sbjct: 262 SC--DNISDTGIMHLAMGSLRLSG--------------------LDVSDDGINR--MVRQ 297
Query: 300 MKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILS 357
M L L++ + I D +E++A + L ++L TR + G+ + LP L++L+
Sbjct: 298 MHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERIT-QLPCLKVLN 356
Query: 358 LSGTQI-DDYAISYMSMMPSLKFIDISNTDIK-GFIQQVGAETDLVLSLTAL 407
L Q+ D +S ++ LK D+ + G + + A D+ +L +L
Sbjct: 357 LGLWQMTDSEKVSSERLLILLKLSDVDSLAFHAGIVILLEAALDVSFNLISL 408
>gi|298360700|gb|ADI77929.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|298360122|gb|ADI77640.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|298359932|gb|ADI77545.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|112961772|gb|ABI28534.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|313485046|gb|ADR52998.1| InlA [Listeria monocytogenes]
Length = 774
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|298360200|gb|ADI77679.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|218235426|ref|YP_002365348.1| internalin protein [Bacillus cereus B4264]
gi|218163383|gb|ACK63375.1| internalin protein [Bacillus cereus B4264]
Length = 994
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 281 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 341 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 398
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 346 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 390
Query: 399 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 391 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEICDV 436
>gi|112961700|gb|ABI28486.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|104646999|gb|ABF74123.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 170/377 (45%), Gaps = 57/377 (15%)
Query: 108 LW-ALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 166
LW + + LK++DL RC + + + L + LE+L LS + + +L+ L
Sbjct: 39 LWDGIQPLRNLKKMDLFRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGL 96
Query: 167 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWT 222
S L + L+ + + L+ L+ G G + LK FP +S+ L L+ T
Sbjct: 97 SCFYLTNC----IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSST 148
Query: 223 GVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFL 274
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 149 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTL 205
Query: 275 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 334
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 206 QNLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDIS 261
Query: 335 -NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 262 ENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319
Query: 393 QVGAETDLVLSLTALQ--------------NLNHLERLNLEQTQVSDATLF-----PLST 433
+G +++L LQ L L+ L + + + L PLS
Sbjct: 320 NIGN----IVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSR 375
Query: 434 FKELIHLSLRNASLTDV 450
F +L LSL N ++T++
Sbjct: 376 FDDLRALSLSNMNMTEI 392
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 84 AYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLE 143
+YLG L+SLN+ CRR+ + L +T L+ L++S C+ V + +++E
Sbjct: 179 SYLGHLVSLKSLNLDGCRRLENLPD-TLQNLTSLETLEVSGCLNVNEFPRVS----TSIE 233
Query: 144 KLWLSETGL--TADGIALLSSLQNLSVLD---LGGLPVTDLVLRSLQVLTKLEYLDLWGS 198
L +SET + I LS L++L + + L LPV+ LRSL+ L KL
Sbjct: 234 VLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKL-KLS------- 285
Query: 199 QVSNRGAAVLKMFPR--------LSFLNLAWTGVTKLP----NISSLECLNLSNCTI 243
G +VL+ FP L + +L T + +LP NI +LE L S I
Sbjct: 286 -----GCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNIVALEVLQASRTVI 337
>gi|87308228|ref|ZP_01090370.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
gi|87289310|gb|EAQ81202.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
Length = 438
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 92 LRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG 151
++ LNV + + L + L+ELDL+ K+TD G+ +L +S LE L LSET
Sbjct: 262 IQKLNVGQTG-IGNQFLSTIGDFPNLRELDLTGS-KITDGGLAYLSELSQLESLTLSETN 319
Query: 152 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 211
+++ S LQ+L L L + + + L LE++DL S V L+
Sbjct: 320 ISSAAAKHFSQLQSLRELHLHNTKLDGQAMVDIAKLKNLEWIDLSKSNVQGEQLLELRKL 379
Query: 212 PRLSFLNLAWT--GVTKLPNISSL 233
P+L + L T G LP + L
Sbjct: 380 PKLRGVVLMNTPIGAADLPYLKQL 403
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 74 GENSVDAEWMAYLGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGM 133
G+ + ++++ +G F LR L++ + +T L L+ ++ L+ L LS ++ A
Sbjct: 268 GQTGIGNQFLSTIGDFPNLRELDLTGSK-ITDGGLAYLSELSQLESLTLSE-TNISSAAA 325
Query: 134 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 193
KH + +L +L L T L + ++ L+NL +DL V L L+ L KL +
Sbjct: 326 KHFSQLQSLRELHLHNTKLDGQAMVDIAKLKNLEWIDLSKSNVQGEQLLELRKLPKLRGV 385
Query: 194 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
L + + GAA L +L ++ + T L N
Sbjct: 386 VLMNTPI---GAADLPYLKQLYHIDEIYVEETNLTN 418
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 287 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV- 343
+ +S F L +++ LE ++ + +I A +G L NLN N R S +
Sbjct: 124 TKASSDSFFGLEELRKLEQVEFTDLVINQ------AVIGGLRGLPNLNQFNIRNSELALP 177
Query: 344 -GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS----NTDIKGFIQQVGAET 398
+ P L+ L + G + D I + +P+L+ + +S I F +
Sbjct: 178 WALDERSFPQLKTLLIDGGKADAALIGEVCSIPTLQQLQLSCPVGQFTINDFRRLADLPN 237
Query: 399 DLVLSLT-----------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 447
+ LSL A Q L +++LN+ QT + + L + F L L L + +
Sbjct: 238 LVDLSLVRSSLPDESCPLATQQLK-IQKLNVGQTGIGNQFLSTIGDFPNLRELDLTGSKI 296
Query: 448 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 491
TD L LS LS+L +L++ + ++++ F +SL+ L LH
Sbjct: 297 TDGGLAYLSELSQLESLTLSETNISSAAAKHFSQLQSLRELHLH 340
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 144/329 (43%), Gaps = 47/329 (14%)
Query: 130 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 189
D G++ + ++S L+ L +++T ++D L L+ L ++ L + V+ L+ L
Sbjct: 104 DKGIRVVTTLSPLKALLIAKTKASSDSFFGLEELRKLEQVEFTDLVINQAVIGGLRGLPN 163
Query: 190 LEYLDLWGSQVSNRGAAVLKMFPRLSFL-------NLAWTG-VTKLPNISSLEC------ 235
L ++ S+++ A + FP+L L + A G V +P + L+
Sbjct: 164 LNQFNIRNSELALPWALDERSFPQLKTLLIDGGKADAALIGEVCSIPTLQQLQLSCPVGQ 223
Query: 236 ---------LNLSNCTIDSILEGN--ENKAPLAKISL------AGTTFINEREAFLYIET 278
+L N S++ + + PLA L G T I + +
Sbjct: 224 FTINDFRRLADLPNLVDLSLVRSSLPDESCPLATQQLKIQKLNVGQTGIGNQFLSTIGDF 283
Query: 279 SLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 336
L LD++ S ++ +L+++ LE L LS + I + + + + +LR L+L NT
Sbjct: 284 PNLRELDLTGSKITDGGLAYLSELSQLESLTLSETNISSAAAKHFSQL-QSLRELHLHNT 342
Query: 337 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 396
+ + +A L NLE + LS + + + + +P L+ + + NT I GA
Sbjct: 343 KLDGQAMVDIA-KLKNLEWIDLSKSNVQGEQLLELRKLPKLRGVVLMNTPI-------GA 394
Query: 397 ETDLVLSLTALQNLNHLERLNLEQTQVSD 425
L L+ L H++ + +E+T +++
Sbjct: 395 A-----DLPYLKQLYHIDEIYVEETNLTN 418
>gi|294358389|gb|ADE73847.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|223698622|gb|ACN18988.1| internalin A [Listeria monocytogenes]
gi|223698634|gb|ACN18996.1| internalin A [Listeria monocytogenes]
gi|223698694|gb|ACN19036.1| internalin A [Listeria monocytogenes]
gi|223698712|gb|ACN19048.1| internalin A [Listeria monocytogenes]
gi|223698745|gb|ACN19070.1| internalin A [Listeria monocytogenes]
gi|223698751|gb|ACN19074.1| internalin A [Listeria monocytogenes]
gi|223698766|gb|ACN19084.1| internalin A [Listeria monocytogenes]
gi|223698769|gb|ACN19086.1| internalin A [Listeria monocytogenes]
gi|223698772|gb|ACN19088.1| internalin A [Listeria monocytogenes]
gi|223698775|gb|ACN19090.1| internalin A [Listeria monocytogenes]
gi|223698778|gb|ACN19092.1| internalin A [Listeria monocytogenes]
gi|223698787|gb|ACN19098.1| internalin A [Listeria monocytogenes]
gi|223698793|gb|ACN19102.1| internalin A [Listeria monocytogenes]
gi|223698799|gb|ACN19106.1| internalin A [Listeria monocytogenes]
gi|223698802|gb|ACN19108.1| internalin A [Listeria monocytogenes]
gi|223698805|gb|ACN19110.1| internalin A [Listeria monocytogenes]
gi|223698817|gb|ACN19118.1| internalin A [Listeria monocytogenes]
gi|223698859|gb|ACN19146.1| internalin A [Listeria monocytogenes]
gi|223698865|gb|ACN19150.1| internalin A [Listeria monocytogenes]
gi|223698979|gb|ACN19226.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 152/317 (47%), Gaps = 55/317 (17%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 213
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 7 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 61
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 62 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 105
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 106 -------LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 151
Query: 334 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 152 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 205
Query: 393 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 206 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 263
Query: 445 ASLTDVSLHQLSSLSKL 461
+++D+S +SSL+KL
Sbjct: 264 NNISDIS--PVSSLTKL 278
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 72 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 127
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 128 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 182
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 183 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|219821372|gb|ACL37826.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|219821267|gb|ACL37756.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|195378110|ref|XP_002047830.1| GJ11710 [Drosophila virilis]
gi|194154988|gb|EDW70172.1| GJ11710 [Drosophila virilis]
Length = 536
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 160/398 (40%), Gaps = 60/398 (15%)
Query: 109 WALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV 168
+ L+ L+L+ C ++ + KH ++L L +S L AL+ L NL
Sbjct: 93 YGFRNFASLQRLNLTHC-QLEELRSKHFADNASLLNLDVSHNDLLIIERALMRQLPNLVY 151
Query: 169 LDLGGLPVTDLVLRSLQVLTKLEYLDL---------WGSQVSNRGAAV------------ 207
+ + ++ + + L LE+LDL GS + R ++
Sbjct: 152 ANFSNNLIANVEFDAFKDLKYLEFLDLNTNEQENITLGSNANLRYLSISNNNVRDFLWCR 211
Query: 208 LKMFPRLSFLNL--AWTGVTKLPNISSLECLNLSNCTIDSILEGNEN--------KAPLA 257
L+ P+L L+L W V + +L L + N + ++I E N PL
Sbjct: 212 LRGLPKLQELHLHSNWLEVLDMGIFYALPELRVLNVSNNNIYEIQRNLFVGPAPDVYPLL 271
Query: 258 KISLAGTTFINEREAFLY-----IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 312
++ + + E +++ +ET L F +S S + F LT++++L+ +
Sbjct: 272 RVLDYSSNNVKALEDYVFSRLHHLETLNLWFNQISKVSPTAFRGLTELQSLQ-------L 324
Query: 313 IGDDSVEMVACVGAN---LRNLNLSNTRFSSAGVGILAGH-LPNLEILSLSGTQIDDYAI 368
G+ V++ V N L+ L+LS G + G L NL L LS ID
Sbjct: 325 QGNKIVQLPDEVFGNLTALQVLDLSKNNIRQLGANVFGGSVLRNLSFLDLSNNNIDQLHP 384
Query: 369 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 428
S +P L+ + + + L + L L L L + ++ D
Sbjct: 385 LAFSSLPFLQELRLRRNKLTS------------LDIRMFAPLRRLRVLTLSENRLMDIEA 432
Query: 429 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 466
LSTF +L L + N LT + + + LS+L ++SI
Sbjct: 433 DLLSTFDKLTELQINNNQLTYLPVLEEQLLSQLRHISI 470
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 23/256 (8%)
Query: 268 NEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEM-VACV 324
NE+E + L +L +SN+++ F C L + L+ L L S+ + + ++M +
Sbjct: 181 NEQENITLGSNANLRYLSISNNNVRDFLWCRLRGLPKLQELHLHSNWL--EVLDMGIFYA 238
Query: 325 GANLRNLNLSNTRFSSAGVGILAGHLPN----LEILSLSGTQI---DDYAISYMSMMPSL 377
LR LN+SN + G P+ L +L S + +DY S + + +L
Sbjct: 239 LPELRVLNVSNNNIYEIQRNLFVGPAPDVYPLLRVLDYSSNNVKALEDYVFSRLHHLETL 298
Query: 378 -----KFIDISNTDIKGFIQ----QVGAETDLVLSLTALQNLNHLERLNLEQTQVSD--A 426
+ +S T +G + Q+ + L NL L+ L+L + + A
Sbjct: 299 NLWFNQISKVSPTAFRGLTELQSLQLQGNKIVQLPDEVFGNLTALQVLDLSKNNIRQLGA 358
Query: 427 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 486
+F S + L L L N ++ + SSL L L +R LT+ + F P R L+
Sbjct: 359 NVFGGSVLRNLSFLDLSNNNIDQLHPLAFSSLPFLQELRLRRNKLTSLDIRMFAPLRRLR 418
Query: 487 LLDLHGGWLLTEDAIL 502
+L L L+ +A L
Sbjct: 419 VLTLSENRLMDIEADL 434
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 30/291 (10%)
Query: 223 GVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLL 281
G N +SL+ LNL++C ++ + + + A L + ++ + A + + L
Sbjct: 91 GRYGFRNFASLQRLNLTHCQLEELRSKHFADNASLLNLDVSHNDLLIIERALMR-QLPNL 149
Query: 282 SFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 339
+ + SN+ ++ F +K LE LDL++ ++ + ANLR L++SN
Sbjct: 150 VYANFSNNLIANVEFDAFKDLKYLEFLDLNT----NEQENITLGSNANLRYLSISNNNVR 205
Query: 340 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ---VGA 396
L G LP L+ L L ++ + +P L+ +++SN +I IQ+ VG
Sbjct: 206 DFLWCRLRG-LPKLQELHLHSNWLEVLDMGIFYALPELRVLNVSNNNIYE-IQRNLFVGP 263
Query: 397 ETDL-----VL-----SLTALQN-----LNHLERLNLEQTQVSDATLFPLSTFKELIHLS 441
D+ VL ++ AL++ L+HLE LNL Q+S + EL L
Sbjct: 264 APDVYPLLRVLDYSSNNVKALEDYVFSRLHHLETLNLWFNQISKVSPTAFRGLTELQSLQ 323
Query: 442 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP--RSLKLLDL 490
L+ + + +L+ L L + + G F R+L LDL
Sbjct: 324 LQGNKIVQLPDEVFGNLTALQVLDLSKNNIRQLGANVFGGSVLRNLSFLDL 374
>gi|112961616|gb|ABI28430.1| internalin A [Listeria monocytogenes]
gi|112961649|gb|ABI28452.1| internalin A [Listeria monocytogenes]
gi|112961652|gb|ABI28454.1| internalin A [Listeria monocytogenes]
gi|112961664|gb|ABI28462.1| internalin A [Listeria monocytogenes]
gi|112961691|gb|ABI28480.1| internalin A [Listeria monocytogenes]
gi|112961718|gb|ABI28498.1| internalin A [Listeria monocytogenes]
gi|112961727|gb|ABI28504.1| internalin A [Listeria monocytogenes]
gi|112961748|gb|ABI28518.1| internalin A [Listeria monocytogenes]
gi|112961751|gb|ABI28520.1| internalin A [Listeria monocytogenes]
gi|112961769|gb|ABI28532.1| internalin A [Listeria monocytogenes]
gi|112961775|gb|ABI28536.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|72386459|ref|XP_843654.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|62360673|gb|AAX81083.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
gi|70800186|gb|AAZ10095.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 706
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 328 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 387
L L+LS + G+ + LPN+ LSL GT +D I +S L +D S
Sbjct: 218 LEELSLSGCKNIKKGLEHICA-LPNVRKLSLRGTAANDACILSLSGSTHLADLDCSECMN 276
Query: 388 KGFIQQVGAETDL-VLSLTALQNLN----------HLERLNLEQTQVSDATLFPLSTFKE 436
I+ +G + L VLSL N+ +L LNL T + D + +STFK+
Sbjct: 277 ISDIKALGKISPLEVLSLEKCINMKEGLEELAAIPNLRELNLASTCIDDECVIKVSTFKQ 336
Query: 437 LIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 466
L+HL+ N ++TD+ L+ + L LSI
Sbjct: 337 LVHLNCENCLAVTDI--QPLAKMKTLEYLSI 365
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 57/314 (18%)
Query: 106 SALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN 165
+ + +L+G T L +LD S C+ ++D +K L IS LE L L + +G+ L+++ N
Sbjct: 255 ACILSLSGSTHLADLDCSECMNISD--IKALGKISPLEVLSLEKCINMKEGLEELAAIPN 312
Query: 166 LSVLDLGGLPVTD--------------------LVLRSLQVLTK---LEYLDLWGSQVSN 202
L L+L + D L + +Q L K LEYL + GS+
Sbjct: 313 LRELNLASTCIDDECVIKVSTFKQLVHLNCENCLAVTDIQPLAKMKTLEYLSIGGSRNIE 372
Query: 203 RGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLA 257
G + P+L+ LNL V L LNLS C L + L
Sbjct: 373 VGVRQVCGNPKLTGLNLGGVVVRDVDVMFLREFEGFVTLNLSGCARMKGLYALDGCTRLR 432
Query: 258 KISLAGTTFINEREAFLYIETSLLSFLDVSNS-SLSRFCFLTQMKALEHLDLSSS----- 311
+ L G N ++ L E ++ LD + SLS L +L+ L+LS
Sbjct: 433 TLILRGCK--NVKDITLLRECKDITTLDFTGCISLSDLRPLRNCGSLKMLNLSECARLKH 490
Query: 312 MIGDD------SVEMVACV----------GANLRNLNLSNTRFSSAGVGILAGHLPNLEI 355
+ G + +VEM+ C NL LNL N + + +L G NL+
Sbjct: 491 LTGVEECKKLATVEMIDCKTLEDISALRGCTNLETLNLCNC-GGNPDLSVL-GACKNLKT 548
Query: 356 LSLSG-TQIDDYAI 368
L L+G ++IDD+++
Sbjct: 549 LRLTGSSKIDDFSM 562
>gi|298360648|gb|ADI77903.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|167861924|gb|ACA05661.1| InlA [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLSDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
LS L+LA ++ L +S L L
Sbjct: 270 ASLTNLSDLDLANNQISNLAPLSGLTKL 297
>gi|223698682|gb|ACN19028.1| internalin A [Listeria monocytogenes]
Length = 712
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 152/317 (47%), Gaps = 55/317 (17%)
Query: 155 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 213
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 7 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 61
Query: 214 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 273
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 62 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 105
Query: 274 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 333
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 106 -------LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 151
Query: 334 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 392
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 152 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 205
Query: 393 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 444
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 206 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 263
Query: 445 ASLTDVSLHQLSSLSKL 461
+++D+S +SSL+KL
Sbjct: 264 NNISDIS--PVSSLTKL 278
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 76 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDISS 131
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 132 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 185
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 186 SLTNLTDLDLANNQISNLAPLSGLTKL 212
>gi|254825753|ref|ZP_05230754.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|255521302|ref|ZP_05388539.1| internalin A [Listeria monocytogenes FSL J1-175]
gi|130774771|gb|ABO32400.1| InlA [Listeria monocytogenes]
gi|130774777|gb|ABO32403.1| InlA [Listeria monocytogenes]
gi|130774779|gb|ABO32404.1| InlA [Listeria monocytogenes]
gi|150371874|dbj|BAF65726.1| internalin A [Listeria monocytogenes]
gi|150371876|dbj|BAF65727.1| internalin A [Listeria monocytogenes]
gi|223006790|gb|ACM69352.1| internalin A [Listeria monocytogenes]
gi|290350838|dbj|BAI78340.1| internalin A [Listeria monocytogenes]
gi|293594997|gb|EFG02758.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|298359742|gb|ADI77450.1| internalin A [Listeria monocytogenes]
gi|298359744|gb|ADI77451.1| internalin A [Listeria monocytogenes]
gi|298359756|gb|ADI77457.1| internalin A [Listeria monocytogenes]
gi|298359790|gb|ADI77474.1| internalin A [Listeria monocytogenes]
gi|298359872|gb|ADI77515.1| internalin A [Listeria monocytogenes]
gi|298359880|gb|ADI77519.1| internalin A [Listeria monocytogenes]
gi|298359942|gb|ADI77550.1| internalin A [Listeria monocytogenes]
gi|298359946|gb|ADI77552.1| internalin A [Listeria monocytogenes]
gi|298360032|gb|ADI77595.1| internalin A [Listeria monocytogenes]
gi|298360064|gb|ADI77611.1| internalin A [Listeria monocytogenes]
gi|298360114|gb|ADI77636.1| internalin A [Listeria monocytogenes]
gi|298360202|gb|ADI77680.1| internalin A [Listeria monocytogenes]
gi|298360282|gb|ADI77720.1| internalin A [Listeria monocytogenes]
gi|298360284|gb|ADI77721.1| internalin A [Listeria monocytogenes]
gi|298360314|gb|ADI77736.1| internalin A [Listeria monocytogenes]
gi|298360330|gb|ADI77744.1| internalin A [Listeria monocytogenes]
gi|298360346|gb|ADI77752.1| internalin A [Listeria monocytogenes]
gi|298360410|gb|ADI77784.1| internalin A [Listeria monocytogenes]
gi|298360420|gb|ADI77789.1| internalin A [Listeria monocytogenes]
gi|298360440|gb|ADI77799.1| internalin A [Listeria monocytogenes]
gi|298360454|gb|ADI77806.1| internalin A [Listeria monocytogenes]
gi|298360470|gb|ADI77814.1| internalin A [Listeria monocytogenes]
gi|298360494|gb|ADI77826.1| internalin A [Listeria monocytogenes]
gi|298360506|gb|ADI77832.1| internalin A [Listeria monocytogenes]
gi|298360604|gb|ADI77881.1| internalin A [Listeria monocytogenes]
gi|298360610|gb|ADI77884.1| internalin A [Listeria monocytogenes]
gi|298360612|gb|ADI77885.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|112959452|gb|ABI27253.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 291 IS--PVSSLTKL 300
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 94 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 149
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 150 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 204
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 205 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 234
>gi|313485040|gb|ADR52996.1| InlA [Listeria monocytogenes]
Length = 491
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT--L 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|217965469|ref|YP_002351147.1| internalin-A [Listeria monocytogenes HCC23]
gi|386007166|ref|YP_005925444.1| internalin A [Listeria monocytogenes L99]
gi|386025755|ref|YP_005946531.1| internalin A [Listeria monocytogenes M7]
gi|167861970|gb|ACA05684.1| InlA [Listeria monocytogenes]
gi|167861982|gb|ACA05690.1| InlA [Listeria monocytogenes]
gi|217334739|gb|ACK40533.1| internalin-A [Listeria monocytogenes HCC23]
gi|307569976|emb|CAR83155.1| internalin A [Listeria monocytogenes L99]
gi|336022336|gb|AEH91473.1| internalin A [Listeria monocytogenes M7]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|167862040|gb|ACA05719.1| InlA [Listeria monocytogenes]
gi|194326153|emb|CAQ77235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|322952083|gb|ADX21041.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|313485077|gb|ADR53009.1| InlA [Listeria monocytogenes]
Length = 800
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|298360360|gb|ADI77759.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|348514973|ref|XP_003445014.1| PREDICTED: F-box/LRR-repeat protein 14-like [Oreochromis niloticus]
gi|410918767|ref|XP_003972856.1| PREDICTED: F-box/LRR-repeat protein 14-like [Takifugu rubripes]
Length = 400
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 49/333 (14%)
Query: 66 NAEAIELRGENSVDAEWM--AYLGAFRYLRSLNVADCRRVTSSALWALTG-MTCLKELDL 122
N E++ L G ++ + A++ LR LN++ C+++T S+L + + L+ L+L
Sbjct: 91 NIESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNLEVLEL 150
Query: 123 SRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLV 180
C +T+ G+ + + L+ L L +D GI L+ + + G L + L
Sbjct: 151 GGCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAA--EGCLNLEYLT 208
Query: 181 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLE 234
L+ Q LT L + K +L LNL++ G+ L +++SL
Sbjct: 209 LQDCQKLTDLSL------------KHISKGLTKLRVLNLSFCGGISDAGMIHLSHMTSLW 256
Query: 235 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSR 293
LNL +C D+I + + + L+G +SF D + + +L+
Sbjct: 257 SLNLRSC--DNISDTGTMHLAMGTLRLSGLD---------------VSFCDKIGDQTLA- 298
Query: 294 FCFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 351
++ Q + L+ L L S I DD + + LR LN+ R + G+ ++A HL
Sbjct: 299 --YIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLT 356
Query: 352 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 383
L + L G T+I + ++ +P LK +++
Sbjct: 357 QLVGIDLYGCTKITKRGLERITQLPCLKVLNLG 389
>gi|299065269|emb|CBJ36437.1| leucine-rich-repeat type III effector protein (GALA8) [Ralstonia
solanacearum CMR15]
Length = 524
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 144/364 (39%), Gaps = 40/364 (10%)
Query: 60 LEVFKHNAEAIELRGENSVDAEWMAYLGAFRYL-----RSLNVADCRRVTSSALWALTGM 114
L+ + I+L G N+ + + +YL SL + D +TS AL
Sbjct: 98 LKALPASVRHIDLSGCNATSSTSATSVAGLKYLAKLPITSLVIQDAG-MTSVGARALAAS 156
Query: 115 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 174
L LDL R K+TD G + L + TL L L + A G L++ + L+ L+L G
Sbjct: 157 DTLTSLDL-RGNKITDLGAQALATSRTLTTLNLDTNTIGAKGAQALAASRTLTTLNLRGN 215
Query: 175 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 229
+ D ++L T L L G ++ G L L+ LNLA G L
Sbjct: 216 KIEDAGAQALAASTTLTSLSAEGCRIGLAGVQALAASRSLTTLNLAGNNIDDAGAQALAA 275
Query: 230 ISSLECLNLSNCTIDSILEGNENKA-PLA-------KISLAGTTFINEREAFLYIETSLL 281
+L L+LS I + LA +I AG + ++ + S
Sbjct: 276 SRTLTTLDLSANKIGDAGALALAASRTLASLEVDHCEIGAAGAQALATSDSLAALNISHN 335
Query: 282 SFLDVSNSSLSRFCFLTQMKA------------------LEHLDLSSSMIGDDSVEMVAC 323
D +L+ LT +KA L LDL ++ IGDD + +A
Sbjct: 336 PVGDAGAQALAICRTLTSIKAKDCQIGAAGAQALAASDSLTSLDLDANQIGDDGAQALAT 395
Query: 324 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 383
L +LN+ GV LA + LE L +S +I ++ ++ +L +++S
Sbjct: 396 SN-TLTSLNVRYNTIGDLGVQALAANRL-LESLDVSDNKIGITSVQALAENCTLTSLNVS 453
Query: 384 NTDI 387
+I
Sbjct: 454 GNNI 457
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 157/378 (41%), Gaps = 34/378 (8%)
Query: 117 LKELDLSRCVKVTD------AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
++ +DLS C + AG+K+L + + L + + G+T+ G L++ L+ LD
Sbjct: 105 VRHIDLSGCNATSSTSATSVAGLKYLAKLP-ITSLVIQDAGMTSVGARALAASDTLTSLD 163
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVT 225
L G +TDL ++L L L+L + + +GA L L+ LNL G
Sbjct: 164 LRGNKITDLGAQALATSRTLTTLNLDTNTIGAKGAQALAASRTLTTLNLRGNKIEDAGAQ 223
Query: 226 KLPNISSLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFINEREAFLYIETSLLS 282
L ++L L+ C I L G + A L ++LAG I++ A + L+
Sbjct: 224 ALAASTTLTSLSAEGCRIG--LAGVQALAASRSLTTLNLAGNN-IDDAGAQALAASRTLT 280
Query: 283 FLDVSNSSLSRFCFLTQM--KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 340
LD+S + + L + L L++ IG + +A +L LN+S+
Sbjct: 281 TLDLSANKIGDAGALALAASRTLASLEVDHCEIGAAGAQALA-TSDSLAALNISHNPVGD 339
Query: 341 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 400
AG LA L + QI ++ SL +D+ I Q A ++
Sbjct: 340 AGAQALA-ICRTLTSIKAKDCQIGAAGAQALAASDSLTSLDLDANQIGDDGAQALATSNT 398
Query: 401 VLSLT------------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 448
+ SL AL LE L++ ++ ++ L+ L L++ ++
Sbjct: 399 LTSLNVRYNTIGDLGVQALAANRLLESLDVSDNKIGITSVQALAENCTLTSLNVSGNNIG 458
Query: 449 DVSLHQLSSLSKLTNLSI 466
D L++ LT+L++
Sbjct: 459 DAGAQLLAANRSLTSLNV 476
>gi|298359892|gb|ADI77525.1| internalin A [Listeria monocytogenes]
gi|298360422|gb|ADI77790.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|167862012|gb|ACA05705.1| InlA [Listeria monocytogenes]
Length = 797
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|219821369|gb|ACL37824.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 90 RYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE 149
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 103 KNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDISS 158
Query: 150 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 209
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 159 NKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TLA 212
Query: 210 MFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 213 SLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|219821291|gb|ACL37772.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNKVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L KVTD +K L +++TLE+L
Sbjct: 99 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--KVTD--LKPLANLTTLERL 154
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 155 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 209
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 210 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|219821276|gb|ACL37762.1| internalin A [Listeria monocytogenes]
gi|219821336|gb|ACL37802.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 296 IS--PVSSLTKL 305
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERLDIS 157
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 158 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 211
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 212 ASLTNLTDLDLANNQISNLAPLSGLTKL 239
>gi|226223065|ref|YP_002757172.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731210|ref|YP_006204706.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406703224|ref|YP_006753578.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
gi|167861892|gb|ACA05645.1| InlA [Listeria monocytogenes]
gi|167861914|gb|ACA05656.1| InlA [Listeria monocytogenes]
gi|167861978|gb|ACA05688.1| InlA [Listeria monocytogenes]
gi|194239396|emb|CAQ76838.1| internalin A [Listeria monocytogenes]
gi|225875527|emb|CAS04230.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|298359780|gb|ADI77469.1| internalin A [Listeria monocytogenes]
gi|384389968|gb|AFH79038.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406360254|emb|CBY66527.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
Length = 800
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|150371888|dbj|BAF65733.1| internalin A [Listeria monocytogenes]
gi|150371890|dbj|BAF65734.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|443316011|ref|ZP_21045475.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
gi|442784393|gb|ELR94269.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
Length = 437
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 157/342 (45%), Gaps = 60/342 (17%)
Query: 111 LTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 170
L+ +T L L LS +++D ++ L S++ LE L+L +T I L L NL+ L
Sbjct: 98 LSTLTNLTSLVLSGN-QISD--IQPLASLTKLESLFLESNQIT--NIQSLGGLHNLTWLS 152
Query: 171 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 230
L G V D+ + L LT LE+L L +Q+ + A L L L L++ + ++ +
Sbjct: 153 LSGNQVVDV--QPLSNLTGLEWLFLDDNQIVD--VAPLATLQNLERLLLSYNQIVEIGAL 208
Query: 231 SSLECLNLSNCTIDSILEGN--ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 288
S+LE L + L GN E+ PL+ + R L++L++
Sbjct: 209 SALEKLQ------NLYLNGNQIEDVQPLSGL----------RN---------LAWLELKE 243
Query: 289 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 348
+ + L ++ L L L + I D V+ +A + + L+NL L+ + + V LA
Sbjct: 244 NQVMNIQPLADLENLRWLGLDDNQIVD--VQPLAAL-STLKNLYLNGNQITD--VSSLAA 298
Query: 349 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 408
L NLE L L QI D I +S++ +L F+ +S I ++++ L
Sbjct: 299 -LTNLESLVLGDNQIVD--IQSLSLLENLTFLVLSGNQI--------------VNVSPLS 341
Query: 409 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 450
L LERL L Q+ D PL+T L L L N + DV
Sbjct: 342 ALVRLERLGLNDNQIQDVQ--PLATLTNLSVLVLSNNQIVDV 381
>gi|85679228|gb|ABC72030.1| InlA [Listeria monocytogenes]
Length = 794
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 150
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 240
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 353 IS--PVSSLTKL 362
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 159 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 214
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 215 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 268
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 269 ASLTNLTDLDLANNQISNLAPLSGLTKL 296
>gi|313485061|gb|ADR53004.1| InlA [Listeria monocytogenes]
Length = 724
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|149242645|pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 171 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 229
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 26 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 83
Query: 230 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 278
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 84 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 136
Query: 279 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 325
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 137 SSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 193
Query: 326 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 384
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 194 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 247
Query: 385 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 436
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 248 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 305
Query: 437 LIHLSLRNASLTDVSLHQLSSLSKL 461
L +L+L +++D+S +SSL+KL
Sbjct: 306 LTYLTLYFNNISDIS--PVSSLTKL 328
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L+ +VTD +K L +++TLE+L
Sbjct: 122 IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGN--QVTD--LKPLANLTTLERL 177
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 178 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIGT 233
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 234 --LASLTNLTDLDLANNQISNLAPLSGLTKL 262
>gi|130774813|gb|ABO32419.1| InlA [Listeria monocytogenes]
Length = 800
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 86 LGAFRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKL 145
+ + L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L
Sbjct: 157 IDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERL 212
Query: 146 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 205
+S ++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G
Sbjct: 213 DISSNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG- 267
Query: 206 AVLKMFPRLSFLNLAWTGVTKLPNISSLECL 236
L L+ L+LA ++ L +S L L
Sbjct: 268 -TLASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|130774755|gb|ABO32392.1| InlA [Listeria monocytogenes]
gi|130774767|gb|ABO32398.1| InlA [Listeria monocytogenes]
gi|298359732|gb|ADI77445.1| internalin A [Listeria monocytogenes]
gi|298360004|gb|ADI77581.1| internalin A [Listeria monocytogenes]
gi|298360478|gb|ADI77818.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
>gi|112961679|gb|ABI28472.1| internalin A [Listeria monocytogenes]
gi|112961682|gb|ABI28474.1| internalin A [Listeria monocytogenes]
gi|112961685|gb|ABI28476.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 166
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 167 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 220
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 221 ASLTNLTDLDLANNQISNLAPLSGLTKL 248
>gi|71912408|gb|AAZ53236.1| InlA [Listeria monocytogenes]
Length = 800
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 52/312 (16%)
Query: 160 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 218
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 219 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 278
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 279 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 338
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 339 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 397
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 398 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 449
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 450 VSLHQLSSLSKL 461
+S +SSL+KL
Sbjct: 354 IS--PVSSLTKL 363
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 89 FRYLRSLNVADCRRVTSSALWALTGMTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS 148
+ L +LN + T S + AL+G+T L++L +VTD +K L +++TLE+L +S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGN--QVTD--LKPLANLTTLERLDIS 215
Query: 149 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 208
++ I++L+ L NL L ++D+ L +LT L+ L L G+Q+ + G L
Sbjct: 216 SNKVS--DISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDIG--TL 269
Query: 209 KMFPRLSFLNLAWTGVTKLPNISSLECL 236
L+ L+LA ++ L +S L L
Sbjct: 270 ASLTNLTDLDLANNQISNLAPLSGLTKL 297
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,569,666,566
Number of Sequences: 23463169
Number of extensions: 328928200
Number of successful extensions: 992473
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 12375
Number of HSP's that attempted gapping in prelim test: 924102
Number of HSP's gapped (non-prelim): 54459
length of query: 619
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 470
effective length of database: 8,863,183,186
effective search space: 4165696097420
effective search space used: 4165696097420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)