BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007088
(618 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 185/326 (56%), Gaps = 11/326 (3%)
Query: 292 SVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRL--EDSQHSEKEFL 349
+++ L +L A+++FS NI+G G G Y L G + +KRL E Q E +F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
+E+ + HRNL+ L GFC+ ERLLVY Y+ NG++ L +DWP R R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
IA+GSARGLA+LH +C+P+IIHR++ + ILLD +FE + DFGLA+LM+ D H+ V
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529
G +G++APEY T ++ K DV+ +GV+LLELITG+R L L++W+
Sbjct: 204 R---GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR--AIA 587
L LE +D L GN D E+ Q ++VA C +P ER M EV ++L +A
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
Query: 588 ERYHFTTDDEIMLPSNTGDPNFPDEL 613
ER+ +E+ D N+P L
Sbjct: 321 ERWEEWQKEEMF----RQDFNYPTHL 342
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/311 (39%), Positives = 180/311 (57%), Gaps = 7/311 (2%)
Query: 292 SVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRL--EDSQHSEKEFL 349
+++ L +L A+++F NI+G G G Y L G + +KRL E +Q E +F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
+E+ + HRNL+ L GFC+ ERLLVY Y+ NG++ L +DWP R R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
IA+GSARGLA+LH +C+P+IIHR++ + ILLD +FE + DFGLA+LM+ D H+ V
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529
G +G++APEY T ++ K DV+ +GV+LLELITG+R L L++W+
Sbjct: 196 RGX---IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR--AIA 587
L LE +D L GN D E+ Q ++VA C +P ER M EV ++L +A
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
Query: 588 ERYHFTTDDEI 598
ER+ +E+
Sbjct: 313 ERWEEWQKEEM 323
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 166/313 (53%), Gaps = 12/313 (3%)
Query: 271 GNKWAKRIKGTKGIKVSAFEKSVEKMR--LSDLMKATNSFSKNNIIGTGRTGATYIAMLP 328
G+K++K S++ E R L DL +ATN+F +IG G G Y +L
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61
Query: 329 GGCFIMIKRLE-DSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGT 387
G + +KR +S +EF +EI TL RH +LV L+GFC + E +L+Y Y+ENG
Sbjct: 62 DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121
Query: 388 LYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447
L L+ ++ M M W RL I IG+ARGL +LH IIHR++ S ILLD +F P
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVP 178
Query: 448 KLSDFGLARLMNPVD-THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K++DFG+++ +D THL V G LGY+ PEY T K DVYSFGVVL E++
Sbjct: 179 KITDFGISKKGTELDQTHLXXVVK---GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 507 TGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCV 566
R + + P +L EW + N LE +D +L L +F A C+
Sbjct: 236 CA-RSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 567 LPTPKERHTMFEV 579
+ ++R +M +V
Sbjct: 294 ALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 165/313 (52%), Gaps = 12/313 (3%)
Query: 271 GNKWAKRIKGTKGIKVSAFEKSVEKMR--LSDLMKATNSFSKNNIIGTGRTGATYIAMLP 328
G+K++K S++ E R L DL +ATN+F +IG G G Y +L
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61
Query: 329 GGCFIMIKRLE-DSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGT 387
G + +KR +S +EF +EI TL RH +LV L+GFC + E +L+Y Y+ENG
Sbjct: 62 DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121
Query: 388 LYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447
L L+ ++ M M W RL I IG+ARGL +LH IIHR++ S ILLD +F P
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVP 178
Query: 448 KLSDFGLARLMNPV-DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K++DFG+++ + THL V G LGY+ PEY T K DVYSFGVVL E++
Sbjct: 179 KITDFGISKKGTELGQTHLXXVVK---GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 507 TGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCV 566
R + + P +L EW + N LE +D +L L +F A C+
Sbjct: 236 CA-RSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 567 LPTPKERHTMFEV 579
+ ++R +M +V
Sbjct: 294 ALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 144/298 (48%), Gaps = 23/298 (7%)
Query: 300 DLMKATNSFSKN------NIIGTGRTGATYIAMLPGGCFIMIKRLE-----DSQHSEKEF 348
+L TN+F + N +G G G Y + + +K+L ++ +++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
EI + +H NLV LLGF + LVY Y+ NG+L D+L + + W +R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRC 136
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
+IA G+A G+ +LH N + IHR+I S ILLD F K+SDFGLAR +
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ--TVM 191
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528
+ G Y+APE R + TPK D+YSFGVVLLE+ITG P+ L
Sbjct: 192 XSRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIK 247
Query: 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586
+ + ++E IDK + + + VA C+ +R + +V QLL+ +
Sbjct: 248 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 143/298 (47%), Gaps = 23/298 (7%)
Query: 300 DLMKATNSFSKN------NIIGTGRTGATYIAMLPGGCFIMIKRLE-----DSQHSEKEF 348
+L TN+F + N +G G G Y + + +K+L ++ +++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
EI + +H NLV LLGF + LVY Y+ NG+L D+L + + W +R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRC 136
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
+IA G+A G+ +LH N + IHR+I S ILLD F K+SDFGLAR +
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ--TVM 191
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528
G Y+APE R + TPK D+YSFGVVLLE+ITG P+ L
Sbjct: 192 XXRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIK 247
Query: 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586
+ + ++E IDK + + + VA C+ +R + +V QLL+ +
Sbjct: 248 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 143/298 (47%), Gaps = 23/298 (7%)
Query: 300 DLMKATNSFSKN------NIIGTGRTGATYIAMLPGGCFIMIKRLE-----DSQHSEKEF 348
+L TN+F + N +G G G Y + + +K+L ++ +++F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 71
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
EI + +H NLV LLGF + LVY Y+ NG+L D+L + + W +R
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRC 130
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
+IA G+A G+ +LH N + IHR+I S ILLD F K+SDFGLAR +
Sbjct: 131 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV--M 185
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528
G Y+APE R + TPK D+YSFGVVLLE+ITG P+ L
Sbjct: 186 XXRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIK 241
Query: 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586
+ + ++E IDK + + + VA C+ +R + +V QLL+ +
Sbjct: 242 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 111/220 (50%), Gaps = 19/220 (8%)
Query: 300 DLMKATNSFSKN------NIIGTGRTGATYIAMLPGGCFIMIKRLE-----DSQHSEKEF 348
+L TN+F + N G G G Y + + +K+L ++ +++F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 68
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
EI +H NLV LLGF + LVY Y NG+L D+L + + W R
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG-TPPLSWHXRC 127
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
+IA G+A G+ +LH N + IHR+I S ILLD F K+SDFGLAR +
Sbjct: 128 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX- 183
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITG 508
+ G Y APE R + TPK D+YSFGVVLLE+ITG
Sbjct: 184 -SRIVGTTAYXAPEALRGEI-TPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEK--EFLSEINTLGSVRHRNLVPLLGFCV 371
IG G G + A G + +E H+E+ EFL E+ + +RH N+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
+V YL G+LY LH + +D RL +A A+G+ +LH N NP I+H
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAR-EQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLVA 489
RN+ S +L+D + K+ DFGL+RL STF++ + G ++APE R +
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 490 TPKGDVYSFGVVLLELITGERP 511
K DVYSFGV+L EL T ++P
Sbjct: 217 NEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 12/202 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEK--EFLSEINTLGSVRHRNLVPLLGFCV 371
IG G G + A G + +E H+E+ EFL E+ + +RH N+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
+V YL G+LY LH + +D RL +A A+G+ +LH N NP I+H
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAR-EQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF--GDLGYVAPEYPRTLVA 489
R++ S +L+D + K+ DFGL+RL S F+ + G ++APE R +
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL------KASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 490 TPKGDVYSFGVVLLELITGERP 511
K DVYSFGV+L EL T ++P
Sbjct: 217 NEKSDVYSFGVILWELATLQQP 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 290 EKSVEKMRL----SDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHS 344
E+ +EK+R+ D K F K IG G +G Y AM + G + I+++ Q
Sbjct: 4 EEILEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 60
Query: 345 EKEFL-SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
+KE + +EI + ++ N+V L + E +V YL G+L D + MD
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMD 115
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463
+ + L +LH N ++IHRNI S ILL D KL+DFG + P +
Sbjct: 116 EGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQS 172
Query: 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP------------ 511
ST V + ++APE PK D++S G++ +E+I GE P
Sbjct: 173 KRSTMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 512 -----THLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVA 562
T PE +++ N LE ++K G+ + HQFL++A
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFL-----NRCLEMDVEKR--GSAKELIQHQFLKIA 277
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 47/297 (15%)
Query: 290 EKSVEKMR----LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHS 344
E+ +EK+R + D K F K IG G +G Y AM + G + I+++ Q
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 59
Query: 345 EKEFL-SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
+KE + +EI + ++ N+V L + E +V YL G+L D + MD
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMD 114
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463
+ + L +LH N ++IHR+I S ILL D KL+DFG + P +
Sbjct: 115 EGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171
Query: 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG 523
ST V + ++APE PK D++S G++ +E+I GE P +L P
Sbjct: 172 KRSTMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE-PPYLNENP----- 221
Query: 524 SLVEWITLLNTNSSLE-------TAIDKSLLGNGFDGEL-----------HQFLRVA 562
+ + L+ TN + E +AI + L D ++ HQFL++A
Sbjct: 222 --LRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 17/212 (8%)
Query: 309 SKNNIIGTGRTGATYIAMLPGGCF-----IMIKRLEDSQHSEKE---FLSEINTLGSVRH 360
++ +IG G G Y ML + IK L+ + ++EK+ FL E +G H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQFSH 105
Query: 361 RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW 420
N++ L G K +++ Y+ENG L L + E + LR G A G+ +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKY 162
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVA 480
L N +HR+++++ IL++ + K+SDFGL+R++ D + +G + + A
Sbjct: 163 L---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTTSGGKIPIRWTA 218
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
PE T DV+SFG+V+ E++T GERP
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + I ++ D + + F +E+ L RH N++ +G+ +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MT 102
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K +V + E +LY LH E + + IA +A+G+ +LH IIHR
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYLHAK---NIIHR 156
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP- 491
++ S I L K+ DFGLA + + S V G + ++APE R P
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSG--SQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 492 --KGDVYSFGVVLLELITGERP-THLTN 516
+ DVYS+G+VL EL+TGE P +H+ N
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 47/297 (15%)
Query: 290 EKSVEKMR----LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHS 344
E+ +EK+R + D K F K IG G +G Y AM + G + I+++ Q
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 59
Query: 345 EKEFL-SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
+KE + +EI + ++ N+V L + E +V YL G+L D + MD
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMD 114
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463
+ + L +LH N ++IHR+I S ILL D KL+DFG + P +
Sbjct: 115 EGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171
Query: 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG 523
S V + ++APE PK D++S G++ +E+I GE P +L P
Sbjct: 172 KRSEMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE-PPYLNENP----- 221
Query: 524 SLVEWITLLNTNSSLE-------TAIDKSLLGNGFDGEL-----------HQFLRVA 562
+ + L+ TN + E +AI + L D ++ HQFL++A
Sbjct: 222 --LRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 120/284 (42%), Gaps = 23/284 (8%)
Query: 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKR--LEDSQHSEKEFLSEINTLGSVRHRN 362
+ + +IG+G T A P + IKR LE Q S E L EI + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLH----PAEHEVMHMDWPLRLRIAIGSARGL 418
+V V K E LV L G++ D + EH+ +D I GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
+LH N IHR++ + ILL D +++DFG++ + V F G
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 478 YVAPEYPRTLVATP-KGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
++APE + K D++SFG+ +EL TG P H + V +TL N
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH------KYPPMKVLMLTLQNDPP 245
Query: 537 SLETAI-DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEV 579
SLET + DK +L F ++ C+ P++R T E+
Sbjct: 246 SLETGVQDKEMLKKYGKS----FRKMISLCLQKDPEKRPTAAEL 285
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 120/284 (42%), Gaps = 23/284 (8%)
Query: 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKR--LEDSQHSEKEFLSEINTLGSVRHRN 362
+ + +IG+G T A P + IKR LE Q S E L EI + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLH----PAEHEVMHMDWPLRLRIAIGSARGL 418
+V V K E LV L G++ D + EH+ +D I GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
+LH N IHR++ + ILL D +++DFG++ + V F G
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 478 YVAPEYPRTLVATP-KGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
++APE + K D++SFG+ +EL TG P H + V +TL N
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH------KYPPMKVLMLTLQNDPP 240
Query: 537 SLETAI-DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEV 579
SLET + DK +L F ++ C+ P++R T E+
Sbjct: 241 SLETGVQDKEMLKKYGKS----FRKMISLCLQKDPEKRPTAAEL 280
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 129/296 (43%), Gaps = 45/296 (15%)
Query: 290 EKSVEKMR----LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHS 344
E+ +EK+R + D K F K IG G +G Y AM + G + I+++ Q
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 59
Query: 345 EKEFL-SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
+KE + +EI + ++ N+V L + E +V YL G+L D + MD
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMD 114
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463
+ + L +LH N ++IHR+I S ILL D KL+DFG + P +
Sbjct: 115 EGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171
Query: 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP------------ 511
S V + ++APE PK D++S G++ +E+I GE P
Sbjct: 172 KRSXMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 512 -----THLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVA 562
T PE +++ N LE ++K G+ + HQFL++A
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFL-----NRCLEMDVEKR--GSAKELLQHQFLKIA 276
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 78
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH +E + + + IA +ARG+ +LH IIHR
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLVAT 490
++ S I L D K+ DFGLA V + S E G + ++APE R +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 491 P---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 129/296 (43%), Gaps = 45/296 (15%)
Query: 290 EKSVEKMR----LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHS 344
E+ +EK+R + D K F K IG G +G Y AM + G + I+++ Q
Sbjct: 4 EEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 60
Query: 345 EKEFL-SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
+KE + +EI + ++ N+V L + E +V YL G+L D + MD
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMD 115
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463
+ + L +LH N ++IHR+I S ILL D KL+DFG + P +
Sbjct: 116 EGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 172
Query: 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP------------ 511
S V + ++APE PK D++S G++ +E+I GE P
Sbjct: 173 KRSXMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 512 -----THLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVA 562
T PE +++ N LE ++K G+ + HQFL++A
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFL-----NRCLEMDVEKR--GSAKELIQHQFLKIA 277
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 311 NNIIGTGRTGATYIAML--PG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLV 364
IIG+G +G L PG + IK L+ ++ ++FLSE + +G H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 365 PLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGL-AWL 421
L G + ++V Y+ENG+L + + H + +M + +G RG+ A +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL---------VGMLRGVGAGM 164
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
+ + +HR+++++ +L+D + K+SDFGL+R++ T G+ + + AP
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI-PIRWTAP 223
Query: 482 EYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
E + DV+SFGVV+ E++ GERP
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL+ + T G + + APE T K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAE---XTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 236
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDE 597
EL+Q +R+ C P++R T + LR++ E + T+ +
Sbjct: 237 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTATEGQ 274
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 311 NNIIGTGRTGATYIAML--PG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLV 364
IIG+G +G L PG + IK L+ ++ ++FLSE + +G H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 365 PLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGL-AWL 421
L G + ++V Y+ENG+L + + H + +M + +G RG+ A +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL---------VGMLRGVGAGM 164
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
+ + +HR+++++ +L+D + K+SDFGL+R++ T G+ + + AP
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI-PIRWTAP 223
Query: 482 EYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
E + DV+SFGVV+ E++ GERP
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH +E + + + IA +ARG+ +LH IIHR
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG-EF----GDLGYVAPEYPRTL 487
++ S I L D K+ DFGLA T S + +F G + ++APE R
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 488 VATP---KGDVYSFGVVLLELITGERP 511
+ P + DVY+FG+VL EL+TG+ P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+ A
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ +V + E +LY LH +E + + + IA +ARG+ +LH IIHR
Sbjct: 92 P-QLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG-EF----GDLGYVAPEYPRTL 487
++ S I L D K+ DFGLA T S + +F G + ++APE R
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 488 VATP---KGDVYSFGVVLLELITGERP 511
+ P + DVY+FG+VL EL+TG+ P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 75
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L + I A G+A++ IHRN
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEER---NYIHRN 130
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL+ D + +F + + APE T K
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKF-PIKWTAPEAINYGTFTIKS 187
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L E++T R
Sbjct: 188 DVWSFGILLTEIVTHGR 204
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 32/285 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 88
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 143
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL ++ + T G + + APE T K
Sbjct: 144 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 245
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDE 597
EL+Q +R+ C P++R T + LR++ E + T+ +
Sbjct: 246 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTATEGQ 283
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 32/285 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 85
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 140
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL ++ + T G + + APE T K
Sbjct: 141 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 242
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDE 597
EL+Q +R+ C P++R T + LR++ E + T+ +
Sbjct: 243 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTATEGQ 280
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 333 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL 392
+ IK++E S+ K F+ E+ L V H N+V L G C+ LV Y E G+LY+ L
Sbjct: 35 VAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL 91
Query: 393 HPAE----HEVMH-MDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL-DGDFE 446
H AE + H M W L+ ++G+A+LH +IHR++ +LL G
Sbjct: 92 HGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 145
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFG A + T + G ++APE + K DV+S+G++L E+I
Sbjct: 146 LKICDFGTA-------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 198
Query: 507 TGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCV 566
T +P P +F+ + W T L + K + + C
Sbjct: 199 TRRKPFDEIGGP-AFR---IMWAVHNGTRPPLIKNLPKPIES------------LMTRCW 242
Query: 567 LPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPSNTGDPNFPDELIVAYT 618
P +R +M E+ +++ + RY D+ + P P D + Y
Sbjct: 243 SKDPSQRPSMEEIVKIMTHLM-RYFPGADEPLQYPCQHSLPPGEDGRVEPYV 293
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 32/285 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 87
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 88 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 142
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL ++ + T G + + APE T K
Sbjct: 143 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 244
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDE 597
EL+Q +R+ C P++R T + LR++ E + T+ +
Sbjct: 245 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTATEGQ 282
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 333 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL 392
+ IK++E S+ K F+ E+ L V H N+V L G C+ LV Y E G+LY+ L
Sbjct: 34 VAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL 90
Query: 393 HPAE----HEVMH-MDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL-DGDFE 446
H AE + H M W L+ ++G+A+LH +IHR++ +LL G
Sbjct: 91 HGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFG A + T + G ++APE + K DV+S+G++L E+I
Sbjct: 145 LKICDFGTA-------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197
Query: 507 TGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCV 566
T +P P +F+ + W T L + K + + C
Sbjct: 198 TRRKPFDEIGGP-AFR---IMWAVHNGTRPPLIKNLPKPIES------------LMTRCW 241
Query: 567 LPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPSNTGDPNFPDELIVAYT 618
P +R +M E+ +++ + RY D+ + P P D + Y
Sbjct: 242 SKDPSQRPSMEEIVKIMTHLM-RYFPGADEPLQYPCQHSLPPGEDGRVEPYV 292
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 32/285 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL ++ + T G + + APE T K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 236
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDE 597
EL+Q +R+ C P++R T + LR++ E + T+ +
Sbjct: 237 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTATEGQ 274
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGLAR++ D + G
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 81
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 136
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL ++ + T G + + APE T K
Sbjct: 137 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 238
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTT 594
EL+Q +R+ C P++R T + LR++ E + T
Sbjct: 239 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTAT 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 32/283 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 84
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 139
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL+ D + +F + + APE T K
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKF-PIKWTAPEAINYGTFTIKS 196
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 241
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTD 595
EL+Q +R+ C P++R T + LR++ E + T+
Sbjct: 242 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTATE 277
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 80
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 135
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL ++ + T G + + APE T K
Sbjct: 136 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L E++T R
Sbjct: 193 DVWSFGILLTEIVTHGR 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 32/285 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 89
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 144
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL+ D + +F + + APE T K
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKF-PIKWTAPEAINYGTFTIKS 201
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 246
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDE 597
EL+Q +R+ C P++R T + LR++ E + T+ +
Sbjct: 247 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTATEGQ 284
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL ++ + T G + + APE T K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFD 552
DV+SFG++L E++T G P PE + +LE + + +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--------------NLERGY-RMVRPDNCP 236
Query: 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTT 594
EL+Q +R+ C P++R T + LR++ E + T
Sbjct: 237 EELYQLMRL---CWKERPEDRPT----FDYLRSVLEDFFTAT 271
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 79
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHR 133
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLVAT 490
++ S I L D K+ DFGLA V + S E G + ++APE R
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 491 P---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + IK L+ S + FL E + ++H LV L V++
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYA-VVSE 75
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ +V Y+ G+L D L E + + P + +A A G+A++ IHR+
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIERM---NYIHRD 130
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ S IL+ K++DFGLARL ++ + T G + + APE T K
Sbjct: 131 LRSANILVGNGLICKIADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L EL+T R
Sbjct: 188 DVWSFGILLTELVTKGR 204
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHR 128
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLVAT 490
++ S I L D K+ DFGLA V + S E G + ++APE R
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 491 P---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 76
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 130
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLVAT 490
++ S I L D K+ DFGLA V + S E G + ++APE R
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 491 P---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 85
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 140
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL+ D + +F + + APE T K
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKF-PIKWTAPEAINYGTFTIKS 197
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L E++T R
Sbjct: 198 DVWSFGILLTEIVTHGR 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L +A A G+A++ IHR+
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL+ D + +F + + APE T K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKF-PIKWTAPEAINYGTFTIKS 191
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L E++T R
Sbjct: 192 DVWSFGILLTEIVTHGR 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+ A
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHR 128
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLVAT 490
++ S I L D K+ DFGLA V + S E G + ++APE R
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 491 P---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 101
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 155
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLVAT 490
++ S I L D K+ DFGLA V + S E G + ++APE R
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 491 P---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 79
Query: 373 KKERLLVYSYLENGTLYDKLHPAE--HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRII 430
K + +V + E +LY LH E E++ + + IA +A+G+ +LH II
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAKS---II 131
Query: 431 HRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLV 488
HR++ S I L D K+ DFGLA V + S E G + ++APE R
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 489 ATP---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 126
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 127 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 182
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 30 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 143
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 144 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 199
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 102
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 156
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE--FGDLGYVAPEYPRTLVAT 490
++ S I L D K+ DFGLA V + S E G + ++APE R
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 491 P---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ G + +K L+ S FL+E N + ++H+ LV L V +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 74
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ENG+L D L + ++ L + I A G+A++ IHR+
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--AEGMAFIEER---NYIHRD 129
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLARL+ D + +F + + APE T K
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIE--DNEYTAREGAKF-PIKWTAPEAINYGTFTIKS 186
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L E++T R
Sbjct: 187 DVWSFGILLTEIVTHGR 203
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 20/211 (9%)
Query: 312 NIIGTGRTGATYIA--MLPGG--CFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+IG G G LPG F+ IK L+ ++ ++FLSE + +G H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 366 LLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
L G +++ ++ENG+L + + + + V+ + LR G A G+ +L
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYL-- 151
Query: 424 NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD--LGYVAP 481
+ +HR+++++ IL++ + K+SDFGL+R + DT T+ + G + + AP
Sbjct: 152 -ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAP 209
Query: 482 EYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
E + T DV+S+G+V+ E+++ GERP
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 156 IASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 40 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 153
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 154 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 209
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 312 NIIGTGRTGATYIA--MLPGG--CFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+IG G G LPG F+ IK L+ ++ ++FLSE + +G H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 366 LLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
L G +++ ++ENG+L + + + + V+ + LR G A G+ +L
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYL-- 125
Query: 424 NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD--LGYVAP 481
+ +HR ++++ IL++ + K+SDFGL+R + DT T+ + G + + AP
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAP 183
Query: 482 EYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
E + T DV+S+G+V+ E+++ GERP
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V Y+ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL R++ D + G
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHR 128
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG-EF----GDLGYVAPEYPRTL 487
++ S I L D K+ DFGLA T S + +F G + ++APE R
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 488 VATP---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 94
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 148
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG-EF----GDLGYVAPEYPRTL 487
++ S I L D K+ DFGLA T S + +F G + ++APE R
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 488 VATP---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 314 IGTGRTGATYIAMLPGGCFI-MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
IG+G G Y G + M+ + + F +E+ L RH N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K + +V + E +LY LH E + + + IA +A+G+ +LH IIHR
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 156
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG-EF----GDLGYVAPEYPRTL 487
++ S I L D K+ DFGLA T S + +F G + ++APE R
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 488 VATP---KGDVYSFGVVLLELITGERP 511
P + DVY+FG+VL EL+TG+ P
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G+G+ G + G + +K +++ SE EF E T+ + H LV G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 374 KERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
+V Y+ NG L Y + H E + L + G+A+L + + IH
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFLESH---QFIH 127
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP 491
R+++++ L+D D K+SDFG+ R + +D + V +F + + APE +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYV--LDDQYVSSVGTKF-PVKWSAPEVFHYFKYSS 184
Query: 492 KGDVYSFGVVLLELIT-GERPTHLTNAPE 519
K DV++FG+++ E+ + G+ P L E
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNSE 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 171 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 218
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 219 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYL 277
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 278 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 331
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 332 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 171 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 218
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 219 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYL 277
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 278 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 331
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 332 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 5 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 52
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 53 GTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYL 111
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 112 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 165
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 166 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 5 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 52
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYL 111
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++++ IL+ + K++DFGLARL+
Sbjct: 112 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIE- 165
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 166 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V +ENG+L + + H A+ V+ + LR G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 126
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 127 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 182
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 254 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 301
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 302 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYL 360
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 361 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 414
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 415 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 171 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 218
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 219 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYL 277
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 278 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 331
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 332 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 27/231 (11%)
Query: 299 SDLMKATNSFSKN---------NIIGTGRTGATYIAML--PG--GCFIMIKRLE--DSQH 343
D +A + F+K +IG G G L PG + IK L+ ++
Sbjct: 27 EDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK 86
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMH 401
++FL E + +G H N+V L G K ++V ++ENG L + + H + V+
Sbjct: 87 QRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQ 146
Query: 402 MDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461
+ LR G A G+ +L + +HR+++++ IL++ + K+SDFGL+R++
Sbjct: 147 LVGMLR-----GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ T G+ + + APE + T DV+S+G+V+ E+++ GERP
Sbjct: 199 PEAVYTTTGGKI-PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y+ + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ +V Y+ G L D L E + L + I SA + + IHR
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSA-----MEYLEKKNFIHR 154
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 5 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 52
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYL 111
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL
Sbjct: 112 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL--- 163
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
++ + T G + + APE T K DV+SFG++L EL T R
Sbjct: 164 IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V +ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 156 IASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 5 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 52
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYL 111
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 112 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 165
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 166 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 5 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 52
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYL 111
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 112 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 165
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 166 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLE--DSQHSEKEFLSEINTL 355
+ ATN S + ++G G G L + IK L+ ++ ++FL E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIG 413
G H N++ L G K ++V +ENG+L + + H A+ V+ + LR G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A G+ +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGK 211
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +PE T DV+S+G+VL E+++ GERP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 5 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 52
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKYL 111
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 112 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 165
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 166 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 2 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 49
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 50 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYL 108
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + ++ A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 109 RL--PQLVDMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 162
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 163 -DNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
IG+G+ G ++ + IK + + SE++F+ E + + H LV L G C+ +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
LV+ ++E+G L D L L + + G+A+L C +IHR+
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L+ + K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 185
Query: 494 DVYSFGVVLLELIT 507
DV+SFGV++ E+ +
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
IG+G+ G ++ + IK + + SE++F+ E + + H LV L G C+ +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
LV+ ++E+G L D L L + + G+A+L C +IHR+
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L+ + K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 188
Query: 494 DVYSFGVVLLELIT 507
DV+SFGV++ E+ +
Sbjct: 189 DVWSFGVLMWEVFS 202
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 5 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 52
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G L D L + +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYL 111
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 112 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 165
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 166 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
IG+G+ G ++ + IK + + SE++F+ E + + H LV L G C+ +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
LV+ ++E+G L D L L + + G+A+L C +IHR+
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L+ + K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 183
Query: 494 DVYSFGVVLLELIT 507
DV+SFGV++ E+ +
Sbjct: 184 DVWSFGVLMWEVFS 197
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 2 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 49
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 50 GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYL 108
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + ++ A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 109 RL--PQLVDMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 162
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 163 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 172 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 219
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G+L D L + +
Sbjct: 220 GNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYL 278
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGL RL+
Sbjct: 279 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIE- 332
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 333 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 281 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLED 340
T+G+ A+E E +RL +G G G ++ G + IK L+
Sbjct: 5 TQGLAKDAWEIPRESLRL------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKP 52
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
S + FL E + +RH LV L V+++ +V Y+ G L D L + +
Sbjct: 53 GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKYL 111
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ P + +A A G+A++ +HR++ + IL+ + K++DFGLARL+
Sbjct: 112 RL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE- 165
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D + +F + + APE T K DV+SFG++L EL T R
Sbjct: 166 -DNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 311 NNIIGTGRTGATYIAMLPGGCFIMIKRL-----EDSQHSEKEFLSEINTLGSVRHRNLVP 365
IIG G G Y A G + +K ED + + E ++H N++
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 366 LLGFCVAKKERLLVYSYLENG----TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
L G C+ + LV + G L K P + + ++W A+ ARG+ +L
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPD---ILVNW------AVQIARGMNYL 121
Query: 422 HHNCNPRIIHRNISSKCILL-----DGDFEPKL---SDFGLARLMNPVDTHLSTFVNGEF 473
H IIHR++ S IL+ +GD K+ +DFGLAR + H +T ++
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAA- 175
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G ++APE R + + DV+S+GV+L EL+TGE P
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHRN++++ IL++ +
Sbjct: 100 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENR 153
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 154 VKIGDFGLTKVL-PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 212
Query: 507 T 507
T
Sbjct: 213 T 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
IG+G+ G ++ + IK +++ SE +F+ E + + H LV L G C+ +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
LV+ ++E+G L D L L + + G+A+L C +IHR+
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L+ + K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 205
Query: 494 DVYSFGVVLLELIT 507
DV+SFGV++ E+ +
Sbjct: 206 DVWSFGVLMWEVFS 219
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G G ++ G + IK L+ S + FL E + +RH LV L V++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 74
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ +V Y+ G+L D L + + + P + +A A G+A++ +HR+
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRD 129
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ + K++DFGLARL ++ + T G + + APE T K
Sbjct: 130 LRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L EL T R
Sbjct: 187 DVWSFGILLTELTTKGR 203
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 108/213 (50%), Gaps = 22/213 (10%)
Query: 311 NNIIGTGRTGATYIAML--PG---GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNL 363
+IG G G L PG C + IK L+ ++ +EFLSE + +G H N+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESC-VAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 364 VPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
+ L G +++ ++ENG L + +L+ + V+ + LR G A G+ +L
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYL 132
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM--NPVDTHLSTFVNGEFGDLGYV 479
+HR+++++ IL++ + K+SDFGL+R + N D ++ + G+ + +
Sbjct: 133 AEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI-PIRWT 188
Query: 480 APEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
APE T D +S+G+V+ E+++ GERP
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G G ++ G + IK L+ S + FL E + +RH LV L V++
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 77
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ +V Y+ G+L D L + + + P + +A A G+A++ +HR+
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRD 132
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ + K++DFGLARL+ D + +F + + APE T K
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 189
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L EL T R
Sbjct: 190 DVWSFGILLTELTTKGR 206
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++A + +K ++ S + FL+E N + +++H LV L V K
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 81
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ ++ G+L D L E + P + + A G+A++ IHR+
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRD 136
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLAR++ D + +F + + APE T K
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIE--DNEYTAREGAKF-PIKWTAPEAINFGSFTIKS 193
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKG 523
DV+SFG++L+E++T G P + PE +
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHE 398
++ ++FL E + +G H N++ L G K ++V Y+ENG+L + K + +
Sbjct: 63 TEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT 122
Query: 399 VMHMDWPLRLRIAIGSARGL-AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457
V+ + +G RG+ A + + + +HR+++++ IL++ + K+SDFGL+R+
Sbjct: 123 VIQL---------VGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 173
Query: 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ D + G + + APE T DV+S+G+V+ E+++ GERP
Sbjct: 174 LED-DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G G ++ G + IK L+ S + FL E + +RH LV L V++
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 73
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ +V Y+ G+L D L + + + P + +A A G+A++ +HR+
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRD 128
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ + K++DFGLARL+ D + +F + + APE T K
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 185
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L EL T R
Sbjct: 186 DVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G G ++ G + IK L+ S + FL E + +RH LV L V++
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 75
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ +V Y+ G+L D L + + + P + +A A G+A++ +HR+
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRD 130
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ + K++DFGLARL+ D + +F + + APE T K
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 187
Query: 494 DVYSFGVVLLELITGER 510
DV+SFG++L EL T R
Sbjct: 188 DVWSFGILLTELTTKGR 204
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 22/211 (10%)
Query: 313 IIGTGRTGATYIAML--PG---GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+IG G G L PG C + IK L+ ++ +EFLSE + +G H N++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESC-VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 366 LLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
L G +++ ++ENG L + +L+ + V+ + LR G A G+ +L
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLAE 136
Query: 424 NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM--NPVDTHLSTFVNGEFGDLGYVAP 481
+HR+++++ IL++ + K+SDFGL+R + N D ++ + G+ + + AP
Sbjct: 137 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI-PIRWTAP 192
Query: 482 EYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
E T D +S+G+V+ E+++ GERP
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 130 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 183
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 184 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
Query: 507 T 507
T
Sbjct: 243 T 243
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++A + +K ++ S + FL+E N + +++H LV L V K
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 254
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ ++ G+L D L E + P + + A G+A++ IHR+
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRD 309
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLAR++ D + +F + + APE T K
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIE--DNEYTAREGAKF-PIKWTAPEAINFGSFTIKS 366
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKG 523
DV+SFG++L+E++T G P + PE +
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 397
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 105 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 158
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 159 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
Query: 507 T 507
T
Sbjct: 218 T 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 99 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 153 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 507 T 507
T
Sbjct: 212 T 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 106 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 159
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 160 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
Query: 507 T 507
T
Sbjct: 219 T 219
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+GTG+ G G + IK +++ SE EF+ E + ++ H LV L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ NG L + L H L + + +L + + +HR+
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQTQQ---LLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L++ K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 202
Query: 494 DVYSFGVVLLELIT-GERP 511
D+++FGV++ E+ + G+ P
Sbjct: 203 DIWAFGVLMWEIYSLGKMP 221
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 97 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 150
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 151 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
Query: 507 T 507
T
Sbjct: 210 T 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 104 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 157
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 158 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
Query: 507 T 507
T
Sbjct: 217 T 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+GTG+ G G + IK +++ SE EF+ E + ++ H LV L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ NG L + L H L + + +L + + +HR+
Sbjct: 76 RPIFIITEYMANGCLLNYLREMRHRFQTQQ---LLEMCKDVCEAMEYLE---SKQFLHRD 129
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L++ K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 186
Query: 494 DVYSFGVVLLELIT-GERP 511
D+++FGV++ E+ + G+ P
Sbjct: 187 DIWAFGVLMWEIYSLGKMP 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+GTG+ G G + IK +++ SE EF+ E + ++ H LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ NG L + L H L + + +L + + +HR+
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQTQQ---LLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L++ K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 187
Query: 494 DVYSFGVVLLELIT-GERP 511
D+++FGV++ E+ + G+ P
Sbjct: 188 DIWAFGVLMWEIYSLGKMP 206
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 98 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 151
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 152 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
Query: 507 T 507
T
Sbjct: 211 T 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 99 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 153 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 507 T 507
T
Sbjct: 212 T 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 102 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 156 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 507 T 507
T
Sbjct: 215 T 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+GTG+ G G + IK +++ SE EF+ E + ++ H LV L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ NG L + L H L + + +L + + +HR+
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQTQQ---LLEMCKDVCEAMEYLE---SKQFLHRD 125
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L++ K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 182
Query: 494 DVYSFGVVLLELIT-GERP 511
D+++FGV++ E+ + G+ P
Sbjct: 183 DIWAFGVLMWEIYSLGKMP 201
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 117 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 170
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 171 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
Query: 507 T 507
T
Sbjct: 230 T 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 117 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 170
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 171 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
Query: 507 T 507
T
Sbjct: 230 T 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 99 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 153 VKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 507 T 507
T
Sbjct: 212 T 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 103 SLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 156
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 157 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
Query: 507 T 507
T
Sbjct: 216 T 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
IG+G+ G ++ + IK + + SE++F+ E + + H LV L G C+ +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
LV ++E+G L D L L + + G+A+L C +IHR+
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L+ + K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 186
Query: 494 DVYSFGVVLLELIT 507
DV+SFGV++ E+ +
Sbjct: 187 DVWSFGVLMWEVFS 200
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 8/194 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ + +K L+ S + FL E N + +++H LV L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ G+L D L E + + P + + A G+A++ IHR+
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRD 135
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + +L+ K++DFGLAR++ D + +F + + APE T K
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIE--DNEYTAREGAKF-PIKWTAPEAINFGCFTIKS 192
Query: 494 DVYSFGVVLLELIT 507
DV+SFG++L E++T
Sbjct: 193 DVWSFGILLYEIVT 206
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+GTG+ G G + IK +++ SE EF+ E + ++ H LV L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ NG L + L H L + + +L + + +HR+
Sbjct: 83 RPIFIITEYMANGCLLNYLREMRHRFQTQQ---LLEMCKDVCEAMEYLE---SKQFLHRD 136
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L++ K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 193
Query: 494 DVYSFGVVLLELIT-GERP 511
D+++FGV++ E+ + G+ P
Sbjct: 194 DIWAFGVLMWEIYSLGKMP 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ YL G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L D L + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 102 SLRDYLQAHAERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 156 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 507 T 507
T
Sbjct: 215 T 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+GTG+ G G + IK +++ SE EF+ E + ++ H LV L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ NG L + L H L + + +L + + +HR+
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQTQQ---LLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L++ K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEETSSVGSKF-PVRWSPPEVLMYSKFSSKS 202
Query: 494 DVYSFGVVLLELIT-GERP 511
D+++FGV++ E+ + G+ P
Sbjct: 203 DIWAFGVLMWEIYSLGKMP 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
IG G TG IA + G + +K+++ + +E L +E+ + +H N+V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +V +LE G L D + H M+ + + +A+ A L+ LH +IH
Sbjct: 88 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA--LSVLHAQG---VIH 139
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP 491
R+I S ILL D KLSDFG ++ V + ++APE L P
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYGP 195
Query: 492 KGDVYSFGVVLLELITGERP 511
+ D++S G++++E++ GE P
Sbjct: 196 EVDIWSLGIMVIEMVDGEPP 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 27/237 (11%)
Query: 293 VEKMRLSDLMKATNSFSKN---------NIIGTGRTGATYIAML--PGG--CFIMIKRLE 339
V+ D +A F+K +IG G G L PG + IK L+
Sbjct: 7 VDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 340 D--SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPA 395
+ ++FLSE + +G H N++ L G K +++ Y+ENG+L + + +
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG 126
Query: 396 EHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455
V+ + LR IGS G+ +L + +HR+++++ IL++ + K+SDFG++
Sbjct: 127 RFTVIQLVGMLR---GIGS--GMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
R++ D + G + + APE T DV+S+G+V+ E+++ GERP
Sbjct: 179 RVLED-DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
IG G TG IA + G + +K+++ + +E L +E+ + +H N+V + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +V +LE G L D + H M+ + + +A+ A L+ LH +IH
Sbjct: 99 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA--LSVLHAQG---VIH 150
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP 491
R+I S ILL D KLSDFG ++ V + ++APE L P
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYGP 206
Query: 492 KGDVYSFGVVLLELITGERP 511
+ D++S G++++E++ GE P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
IG G TG IA + G + +K+++ + +E L +E+ + +H N+V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +V +LE G L D + H M+ + + +A+ A L+ LH +IH
Sbjct: 92 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA--LSVLHAQG---VIH 143
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP 491
R+I S ILL D KLSDFG ++ V + ++APE L P
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYGP 199
Query: 492 KGDVYSFGVVLLELITGERP 511
+ D++S G++++E++ GE P
Sbjct: 200 EVDIWSLGIMVIEMVDGEPP 219
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
IG G TG IA + G + +K+++ + +E L +E+ + +H N+V + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +V +LE G L D + H M+ + + +A+ A L+ LH +IH
Sbjct: 97 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA--LSVLHAQG---VIH 148
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP 491
R+I S ILL D KLSDFG ++ V + ++APE L P
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYGP 204
Query: 492 KGDVYSFGVVLLELITGERP 511
+ D++S G++++E++ GE P
Sbjct: 205 EVDIWSLGIMVIEMVDGEPP 224
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 314 IGTGRTG-ATYIAMLPGGCFIMIKRLEDSQHSEKE---FLSEINTLGSVRHRNLVPLLGF 369
IGTG G I G ++ K L+ +E E +SE+N L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 370 CVAKKERLL--VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN- 426
+ + L V Y E G L + E ++D LR+ L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 427 -PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
++HR++ + LDG KL DFGLAR++N H ++F G Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----HDTSFAKAFVGTPYYMSPEQMN 189
Query: 486 TLVATPKGDVYSFGVVLLEL 505
+ K D++S G +L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
IG G TG IA + G + +K+++ + +E L +E+ + +H N+V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +V +LE G L D + H M+ + + +A+ A L+ LH +IH
Sbjct: 219 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA--LSVLHAQG---VIH 270
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP 491
R+I S ILL D KLSDFG ++ V + ++APE L P
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYGP 326
Query: 492 KGDVYSFGVVLLELITGERP 511
+ D++S G++++E++ GE P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 18/210 (8%)
Query: 311 NNIIGTGRTGATYIAML--PGG--CFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLV 364
+IG G G L PG + IK L+ + ++FLSE + +G H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 365 PLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
L G K +++ Y+ENG+L + + + V+ + LR IGS G+ +L
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGS--GMKYLS 133
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ +HR+++++ IL++ + K+SDFG++R++ D + G + + APE
Sbjct: 134 ---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPE 189
Query: 483 YPRTLVATPKGDVYSFGVVLLELIT-GERP 511
T DV+S+G+V+ E+++ GERP
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
K F E++ + H+N+V ++ LV Y+E TL E + P
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL--------SEYIESHGP 107
Query: 406 LRLRIAIG-SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464
L + AI + + L + H + RI+HR+I + IL+D + K+ DFG+A+ ++ +T
Sbjct: 108 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS--ETS 165
Query: 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
L T N G + Y +PE + D+YS G+VL E++ GE P
Sbjct: 166 L-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
IG G TG IA + G + +K+++ + +E L +E+ + +H N+V + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +V +LE G L D + H M+ + + +A+ A L+ LH +IH
Sbjct: 142 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQA--LSVLHAQG---VIH 193
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP 491
R+I S ILL D KLSDFG ++ V + ++APE L P
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYGP 249
Query: 492 KGDVYSFGVVLLELITGERP 511
+ D++S G++++E++ GE P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 18/210 (8%)
Query: 311 NNIIGTGRTGATYIAML--PGG--CFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLV 364
+IG G G L PG + IK L+ + ++FLSE + +G H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 365 PLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
L G K +++ Y+ENG+L + + + V+ + LR IGS G+ +L
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGS--GMKYLS 127
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ +HR+++++ IL++ + K+SDFG++R++ D + G + + APE
Sbjct: 128 ---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPE 183
Query: 483 YPRTLVATPKGDVYSFGVVLLELIT-GERP 511
T DV+S+G+V+ E+++ GERP
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHM 402
+ + FL+E + + +RH NLV LLG V +K L +V Y+ G+L D L V+
Sbjct: 48 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG 107
Query: 403 DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
D L+ + + A + +L N +HR+++++ +L+ D K+SDFGL + +
Sbjct: 108 DCLLKFSLDVCEA--MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--- 159
Query: 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
ST G+ + + APE R + K DV+SFG++L E+ +
Sbjct: 160 ---STQDTGKL-PVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 339
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
N++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 396
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 397 SDVWAFGVLLWEIAT 411
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 314 IGTGRTG-ATYIAMLPGGCFIMIKRLEDSQHSEKE---FLSEINTLGSVRHRNLVPLLGF 369
IGTG G I G ++ K L+ +E E +SE+N L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 370 CVAKKERLL--VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN- 426
+ + L V Y E G L + E ++D LR+ L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 427 -PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
++HR++ + LDG KL DFGLAR++N + TFV + Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY----YMSPEQMN 189
Query: 486 TLVATPKGDVYSFGVVLLEL 505
+ K D++S G +L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
IG+G+ G ++ + IK + + SE++F+ E + + H LV L G C+ +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
LV+ ++E+G L D L L + + G+A+L +IHR+
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLE---EASVIHRD 128
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L+ + K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 185
Query: 494 DVYSFGVVLLELIT 507
DV+SFGV++ E+ +
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + + L + I SA + + IHR
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNFIHR 342
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
N++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 400 SDVWAFGVLLWEIAT 414
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 381
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
N++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 439 SDVWAFGVLLWEIAT 453
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 112
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 168
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 85
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 141
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 136
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 194 SDVWAFGVLLWEIAT 208
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 93
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 149
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 111
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 167
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 92
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 148
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 93
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 149
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 140
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 148
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 206 SDVWAFGVLLWEIAT 220
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 91
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 147
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 140
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 137
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+GTG+ G G + IK +++ SE EF+ E + ++ H LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ Y+ NG L + L H L + + +L + + +HR+
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQTQQ---LLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ L++ K+SDFGL+R + +D ++ +F + + PE + K
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSRGSKF-PVRWSPPEVLMYSKFSSKS 187
Query: 494 DVYSFGVVLLELIT-GERP 511
D+++FGV++ E+ + G+ P
Sbjct: 188 DIWAFGVLMWEIYSLGKMP 206
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 137
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 88
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 144
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 140
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 90
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 146
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + + G + ++A E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 135
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 135
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 139
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 197 SDVWAFGVLLWEIAT 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 137
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHM 402
+ + FL+E + + +RH NLV LLG V +K L +V Y+ G+L D L V+
Sbjct: 57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG 116
Query: 403 DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
D L+ + + A + +L N +HR+++++ +L+ D K+SDFGL + +
Sbjct: 117 DCLLKFSLDVCEA--MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--- 168
Query: 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
ST G+ + + APE R + K DV+SFG++L E+ +
Sbjct: 169 ---STQDTGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHM 402
+ + FL+E + + +RH NLV LLG V +K L +V Y+ G+L D L V+
Sbjct: 229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG 288
Query: 403 DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
D L+ + + A + +L N +HR+++++ +L+ D K+SDFGL + +
Sbjct: 289 DCLLKFSLDVCEA--MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--- 340
Query: 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
ST G+ + + APE R + K DV+SFG++L E+ +
Sbjct: 341 ---STQDTGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 92
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 148
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ + +HR+++++ +LD F K++DFGLAR M + G + ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTH 513
+T T K DV+SFGV+L EL+T P +
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + + L + I SA + + IHR
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNFIHR 135
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
IG G G + G + +K +++ ++ FL+E + + +RH NLV LLG V +
Sbjct: 14 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 374 KERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
K L +V Y+ G+L D L V+ D L+ + + A + +L N +HR
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA--MEYLEGN---NFVHR 126
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ +L+ D K+SDFGL + + ST G+ + + APE R + K
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKL-PVKWTAPEALREKKFSTK 179
Query: 493 GDVYSFGVVLLELIT 507
DV+SFG++L E+ +
Sbjct: 180 SDVWSFGILLWEIYS 194
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + + L + I SA + + IHR
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNFIHR 135
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + + L + I SA + + IHR
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNFIHR 135
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 94
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 150
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVA 480
+ + +HR+++++ +LD F K++DFGLAR M +D + N L ++A
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--LDKEFDSVHNKTGAKLPVKWMA 206
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
E +T T K DV+SFGV+L EL+T P +
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + + L + I SA + + IHR
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNFIHR 135
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + + L + I SA + + IHR
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNFIHR 140
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENG 386
G + +K+L+ S ++F EI L S++H N+V G C + R L+ +L G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+L + L + + H+ L+ +G+ +L R IHR+++++ IL++ +
Sbjct: 102 SLREYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K+ DFGL +++ P D + + APE + DV+SFGVVL EL
Sbjct: 156 VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 507 T 507
T
Sbjct: 215 T 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 140
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DT--XTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + ++ L + I SA + + IHR
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNFIHR 136
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT T G + + APE + K
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTG-DT--XTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 194 SDVWAFGVLLWEIAT 208
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 12/200 (6%)
Query: 314 IGTGRTG-ATYIAMLPGGCFIMIKRLEDSQHSEKE---FLSEINTLGSVRHRNLVPLLGF 369
IGTG G I G ++ K L+ +E E +SE+N L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 370 CVAKKERLL--VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN- 426
+ + L V Y E G L + E ++D LR+ L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 427 -PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
++HR++ + LDG KL DFGLAR++N + FV + Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPY----YMSPEQMN 189
Query: 486 TLVATPKGDVYSFGVVLLEL 505
+ K D++S G +L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 91
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 147
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVA 480
+ + +HR+++++ +LD F K++DFGLAR M D + N L ++A
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 203
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
E +T T K DV+SFGV+L EL+T P +
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++A + +K ++ S + FL+E N + +++H LV L V K
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 248
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ ++ G+L D L E + P + + A G+A++ IHR+
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRD 303
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + IL+ K++DFGLAR V +F + + APE T K
Sbjct: 304 LRAANILVSASLVCKIADFGLAR------------VGAKF-PIKWTAPEAINFGSFTIKS 350
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKG 523
DV+SFG++L+E++T G P + PE +
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 381
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 93
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 149
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVA 480
+ + +HR+++++ +LD F K++DFGLAR M D + N L ++A
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 205
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
E +T T K DV+SFGV+L EL+T P +
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 93
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 149
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVA 480
+ + +HR+++++ +LD F K++DFGLAR M D + N L ++A
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 205
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
E +T T K DV+SFGV+L EL+T P +
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINT 354
M L + + +G G+ G Y + + +K L++ +EFL E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 355 LGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGS 414
+ ++H NLV LLG C + ++ ++ G L D L + + L + I S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474
A + + IHR+++++ L+ + K++DFGL+RLM DT + +F
Sbjct: 121 A-----MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DT-FTAHAGAKF- 172
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+ + APE + K DV++FGV+L E+ T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 152
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 208
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVA 480
+ + +HR+++++ +LD F K++DFGLAR M D + N L ++A
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 264
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
E +T T K DV+SFGV+L EL+T P +
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 94
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 150
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVA 480
+ + +HR+++++ +LD F K++DFGLAR M D + N L ++A
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 206
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
E +T T K DV+SFGV+L EL+T P +
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 314 IGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
IG G TG IA G + +K+++ + +E L +E+ + H N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +V +LE G L D + M+ + + R L++LH N +IH
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLSVLRALSYLH---NQGVIH 164
Query: 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP 491
R+I S ILL D KLSDFG ++ V + ++APE L
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPY----WMAPEVISRLPYGT 220
Query: 492 KGDVYSFGVVLLELITGERPTHLTNAP----ESFKGSLVEWITLLNTNSSL--------- 538
+ D++S G++++E+I GE P + P + SL + L+ SS+
Sbjct: 221 EVDIWSLGIMVIEMIDGE-PPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLML 279
Query: 539 -----ETAIDKSLLGNGFDGELHQFLRVAC--NCVLPTPKE-RH 574
+ A + LLG H FL++A +C++P ++ RH
Sbjct: 280 VREPSQRATAQELLG-------HPFLKLAGPPSCIVPLMRQYRH 316
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 8/194 (4%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
+G G+ G ++ + +K L+ S + FL E N + +++H LV L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
+ ++ ++ G+L D L E + + P + + A G+A++ IHR+
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRD 134
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ + +L+ K++DFGLAR++ D + +F + + APE T K
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIE--DNEYTAREGAKF-PIKWTAPEAINFGCFTIKS 191
Query: 494 DVYSFGVVLLELIT 507
+V+SFG++L E++T
Sbjct: 192 NVWSFGILLYEIVT 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 314 IGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G+ G Y + + +K L++ +EFL E + ++H NLV LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ ++ ++ G L D L + + L + I SA + + IHR
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNFIHR 133
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+++++ L+ + K++DFGL+RLM DT T G + + APE + K
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTG-DT--XTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 493 GDVYSFGVVLLELIT 507
DV++FGV+L E+ T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 311 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
N +IG G G Y L C + + R+ D +FL+E + H N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 98
Query: 364 VPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ LLG C+ ++ L+V Y+++G L + + H D + + A+G+ +L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 154
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVA 480
+ + +HR+++++ +LD F K++DFGLAR M D + N L ++A
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 210
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
E +T T K DV+SFGV+L EL+T P +
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCF-IMIKRLEDSQHSEKEFLSEINT 354
M L + + +G G+ G Y + + +K L++ +EFL E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 355 LGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGS 414
+ ++H NLV LLG C + ++ ++ G L D L + + L + I S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474
A + + IHR+++++ L+ + K++DFGL+RLM DT T G
Sbjct: 121 A-----MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DT--XTAHAGAKF 172
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+ + APE + K DV++FGV+L E+ T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 26/176 (14%)
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
+EF E+ + ++ H N+V L G + +V ++ G LY +L H + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI---KWS 122
Query: 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE-----PKLSDFGLARLMNP 460
++LR+ + A G+ ++ N NP I+HR++ S I L E K++DFGL++
Sbjct: 123 VKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---- 177
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-----TPKGDVYSFGVVLLELITGERP 511
V+G G+ ++APE T+ A T K D YSF ++L ++TGE P
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPE---TIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 329 GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388
G +M + + + +++ FL E+ + + H N++ +G K + Y++ GTL
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPK 448
+ + + W R+ A A G+A+LH + IIHR+++S L+ +
Sbjct: 95 RGIIKSMDSQY---PWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVV 148
Query: 449 LSDFGLARLMNPVDTH---LSTFVNGE-------FGDLGYVAPEYPRTLVATPKGDVYSF 498
++DFGLARLM T L + + G+ ++APE K DV+SF
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
Query: 499 GVVLLELI 506
G+VL E+I
Sbjct: 209 GIVLCEII 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 333 IMIKRLEDSQHSEKEF---LSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL 388
+ +K L+ S +EK+ +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 104 VAVKMLK-SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 389 ---------------YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433
Y+ H E ++ D + A ARG+ +L + + IHR+
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRD 216
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
++++ +L+ D K++DFGLAR ++ +D + T NG + ++APE + T +
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQS 274
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFK 522
DV+SFGV+L E+ T G P E FK
Sbjct: 275 DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 347 EFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL---------------YD 390
+ +SE+ + + +H+N++ LLG C ++ Y G L Y+
Sbjct: 64 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
H E ++ D + A ARG+ +L + + IHR+++++ +L+ D K++
Sbjct: 124 PSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 177
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GE 509
DFGLAR ++ +D + T NG + ++APE + T + DV+SFGV+L E+ T G
Sbjct: 178 DFGLARDIHHIDYYKKT-TNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 235
Query: 510 RPTHLTNAPESFK 522
P E FK
Sbjct: 236 SPYPGVPVEELFK 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 347 EFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL---------------YD 390
+ +SE+ + + +H+N++ LLG C ++ Y G L Y+
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
H E ++ D + A ARG+ +L + + IHR+++++ +L+ D K++
Sbjct: 139 PSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GE 509
DFGLAR ++ +D + T NG + ++APE + T + DV+SFGV+L E+ T G
Sbjct: 193 DFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 510 RPTHLTNAPESFK 522
P E FK
Sbjct: 251 SPYPGVPVEELFK 263
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 24/177 (13%)
Query: 347 EFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL---------------YD 390
+ +SE+ + + +H+N++ LLG C ++ Y G L Y+
Sbjct: 68 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
H E ++ D + A ARG+ +L + + IHR+++++ +L+ D K++
Sbjct: 128 PSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 181
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
DFGLAR ++ +D + T NG + ++APE + T + DV+SFGV+L E+ T
Sbjct: 182 DFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 347 EFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL---------------YD 390
+ +SE+ + + +H+N++ LLG C ++ Y G L Y+
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
H E ++ D + A ARG+ +L + + IHR+++++ +L+ D K++
Sbjct: 139 PSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GE 509
DFGLAR ++ +D + T NG + ++APE + T + DV+SFGV+L E+ T G
Sbjct: 193 DFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 510 RPTHLTNAPESFK 522
P E FK
Sbjct: 251 SPYPGVPVEELFK 263
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 347 EFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL---------------YD 390
+ +SE+ + + +H+N++ LLG C ++ Y G L Y+
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
H E ++ D + A ARG+ +L + + IHR+++++ +L+ D K++
Sbjct: 132 PSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 185
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GE 509
DFGLAR ++ +D + T NG + ++APE + T + DV+SFGV+L E+ T G
Sbjct: 186 DFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 243
Query: 510 RPTHLTNAPESFK 522
P E FK
Sbjct: 244 SPYPGVPVEELFK 256
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 26/176 (14%)
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
+EF E+ + ++ H N+V L G + +V ++ G LY +L H + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI---KWS 122
Query: 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE-----PKLSDFGLARLMNP 460
++LR+ + A G+ ++ N NP I+HR++ S I L E K++DFG ++
Sbjct: 123 VKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---- 177
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-----TPKGDVYSFGVVLLELITGERP 511
V+G G+ ++APE T+ A T K D YSF ++L ++TGE P
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPE---TIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 24/177 (13%)
Query: 347 EFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL---------------YD 390
+ +SE+ + + +H+N++ LLG C ++ Y G L Y+
Sbjct: 71 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
H E ++ D + A ARG+ +L + + IHR+++++ +L+ D K++
Sbjct: 131 PSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 184
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
DFGLAR ++ +D + T NG + ++APE + T + DV+SFGV+L E+ T
Sbjct: 185 DFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 347 EFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL---------------YD 390
+ +SE+ + + +H+N++ LLG C ++ Y G L Y+
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
H E ++ D + A ARG+ +L + + IHR+++++ +L+ D K++
Sbjct: 139 PSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GE 509
DFGLAR ++ +D + T NG + ++APE + T + DV+SFGV+L E+ T G
Sbjct: 193 DFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 510 RPTHLTNAPESFK 522
P E FK
Sbjct: 251 SPYPGVPVEELFK 263
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D E + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 26/176 (14%)
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
+EF E+ + ++ H N+V L G + +V ++ G LY +L H + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI---KWS 122
Query: 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE-----PKLSDFGLARLMNP 460
++LR+ + A G+ ++ N NP I+HR++ S I L E K++DF L++
Sbjct: 123 VKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---- 177
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-----TPKGDVYSFGVVLLELITGERP 511
V+G G+ ++APE T+ A T K D YSF ++L ++TGE P
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPE---TIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 29/232 (12%)
Query: 280 GTKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLE 339
GT+ + + EK V ++ + SF K ++ + G Y+ I I R+
Sbjct: 14 GTENLYFQSMEKYVRLQKIGE-----GSFGKAILVKSTEDGRQYVIKE-----INISRMS 63
Query: 340 DSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAE--- 396
+ E E+ L +++H N+V +V Y E G L+ +++ +
Sbjct: 64 SKEREESR--REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL 121
Query: 397 -HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455
E +DW +++ +A L H + +I+HR+I S+ I L D +L DFG+A
Sbjct: 122 FQEDQILDWFVQICLA---------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Query: 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
R++N G Y++PE K D+++ G VL EL T
Sbjct: 173 RVLNST----VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 122 IPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRI 181
IP +I S + Y+ L+L N +SG IP + + LN+L L++N+ G+IP + L +
Sbjct: 645 IPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 703
Query: 182 KTFSVASNLLTGPVPSFANV-NFTAEDFANNSGLCGKPLNPC 222
+++N L+GP+P F F NN GLCG PL C
Sbjct: 704 TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRC 745
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 76 CWHPDENKVLNIRLSDMGLKGQFPRGIERCXXXXXXXXXXXXXXXXIPSDISS------- 128
C +P +N + + L + G G+ P + C IPS + S
Sbjct: 386 CQNP-KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 129 -------------RLQYVTSLD---LSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIP 172
L YV +L+ L N L+GEIPSGL+NCT LN + L+NNR TG+IP
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 173 PQLGLLNRIKTFSVASNLLTGPVPS 197
+G L + +++N +G +P+
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIPA 529
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 83 KVLNIRLSDMGLKGQFPRGIERCXXXXXXXXXXXXXXXXIPSDIS--SRLQYVTSLDLSS 140
K+ +++L L+G+ P+ + IPS +S + L +++ LS+
Sbjct: 440 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS---LSN 496
Query: 141 NSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197
N L+GEIP + L +LKL+NN F+G IP +LG + + +NL G +P+
Sbjct: 497 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 128 SRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVA 187
S LQ+ LD+S N LSG+ ++ CT L +L +++N+F G IPP L ++ S+A
Sbjct: 220 SALQH---LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLA 274
Query: 188 SNLLTGPVPSF 198
N TG +P F
Sbjct: 275 ENKFTGEIPDF 285
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 128 SRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVA 187
SR + LD+SSN+ S IP L +C+ L L ++ N+ +G + +K +++
Sbjct: 194 SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 252
Query: 188 SNLLTGPVP----------SFANVNFTAE--DFANNSGLC 215
SN GP+P S A FT E DF SG C
Sbjct: 253 SNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFL--SGAC 290
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 36 DIECLKSVKNSLEDPFNYLTTSWNFNNNTEGFICQFTGVDCWHPDENKVLNIRLSDMGLK 95
+I L S K+ L D L W+ N N C F GV C ++KV +I LS L
Sbjct: 10 EIHQLISFKDVLPD--KNLLPDWSSNKNP----CTFDGVTC---RDDKVTSIDLSSKPLN 60
Query: 96 GQFPRGIERCXXXXXXXXXXXXXXXXIPSDISSR--LQYVTSLDLSSNSLSGEIP--SGL 151
F + I +S +TSLDLS NSLSG + + L
Sbjct: 61 VGF-SAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSL 119
Query: 152 ANCTFLNVLKLNNNR--FTGKIPPQLGLLNRIKTFSVASNLLTG 193
+C+ L L +++N F GK+ L LN ++ +++N ++G
Sbjct: 120 GSCSGLKFLNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSISG 162
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 122 IPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNR- 180
IP +S +T LDLS N G +P +C+ L L L++N F+G++P L R
Sbjct: 282 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 341
Query: 181 IKTFSVASNLLTGPVP 196
+K ++ N +G +P
Sbjct: 342 LKVLDLSFNEFSGELP 357
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 43/222 (19%)
Query: 312 NIIGTGRTGATYIAMLPGGCFIMIK--RLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGF 369
I GR G + A L F+ +K L+D Q + E EI + ++H NL L F
Sbjct: 21 EIKARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSE--REIFSTPGMKHENL---LQF 74
Query: 370 CVAKK-------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
A+K E L+ ++ + G+L D L + W +A +RGL++LH
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLH 129
Query: 423 HNC--------NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN----PVDTHLSTFVN 470
+ P I HR+ SK +LL D L+DFGLA P DTH
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH------ 183
Query: 471 GEFGDLGYVAPEYPRTLV-----ATPKGDVYSFGVVLLELIT 507
G+ G Y+APE + A + D+Y+ G+VL EL++
Sbjct: 184 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLG--FCVAKKERLLVYSYLENG 386
G + +K+L+ S +++F EI L ++ +V G + + E LV YL +G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
L D L + +D L + +G+ +L R +HR+++++ IL++ +
Sbjct: 96 CLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 149
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K++DFGLA+L+ P+D + + APE + + + DV+SFGVVL EL
Sbjct: 150 VKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
Query: 507 T 507
T
Sbjct: 209 T 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ +Y G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 122/302 (40%), Gaps = 44/302 (14%)
Query: 314 IGTGRTGATYIAMLPG-GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G GR G + + G + I D Q +E +EI +RH N+ LGF +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNI---LGFIAS 70
Query: 373 -------KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH--- 422
+ L+ Y E+G+LYD L E L LR+A+ +A GLA LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPH-----LALRLAVSAACGLAHLHVEI 125
Query: 423 --HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVA 480
P I HR+ S+ +L+ + + ++D GLA + + +L N G Y+A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 481 PEYPRTLVAT------PKGDVYSFGVVLLE---------LITGERPTHLTNAPESFKGSL 525
PE + T D+++FG+VL E ++ RP P
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFED 245
Query: 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585
++ + ++ + I L + L Q +R C P P R T + + L+
Sbjct: 246 MKKVVCVDQQTP---TIPNRLAADPVLSGLAQMMR---ECWYPNPSARLTALRIKKTLQK 299
Query: 586 IA 587
I+
Sbjct: 300 IS 301
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTAR 173
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 231
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 232 FGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 175
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQSDVWS 233
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 234 FGVLMWEIFT 243
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + +T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 122 IPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRI 181
IP +I S + Y+ L+L N +SG IP + + LN+L L++N+ G+IP + L +
Sbjct: 648 IPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706
Query: 182 KTFSVASNLLTGPVPSFANV-NFTAEDFANNSGLCGKPLNPC 222
+++N L+GP+P F F NN GLCG PL C
Sbjct: 707 TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRC 748
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 76 CWHPDENKVLNIRLSDMGLKGQFPRGIERCXXXXXXXXXXXXXXXXIPSDISS------- 128
C +P +N + + L + G G+ P + C IPS + S
Sbjct: 389 CQNP-KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 129 -------------RLQYVTSLD---LSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIP 172
L YV +L+ L N L+GEIPSGL+NCT LN + L+NNR TG+IP
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 173 PQLGLLNRIKTFSVASNLLTGPVPS 197
+G L + +++N +G +P+
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPA 532
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 83 KVLNIRLSDMGLKGQFPRGIERCXXXXXXXXXXXXXXXXIPSDIS--SRLQYVTSLDLSS 140
K+ +++L L+G+ P+ + IPS +S + L +++ LS+
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS---LSN 499
Query: 141 NSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197
N L+GEIP + L +LKL+NN F+G IP +LG + + +NL G +P+
Sbjct: 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 128 SRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVA 187
S LQ+ LD+S N LSG+ ++ CT L +L +++N+F G IPP L ++ S+A
Sbjct: 223 SALQH---LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLA 277
Query: 188 SNLLTGPVPSF 198
N TG +P F
Sbjct: 278 ENKFTGEIPDF 288
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 128 SRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVA 187
SR + LD+SSN+ S IP L +C+ L L ++ N+ +G + +K +++
Sbjct: 197 SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 255
Query: 188 SNLLTGPVP----------SFANVNFTAE--DFANNSGLC 215
SN GP+P S A FT E DF SG C
Sbjct: 256 SNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFL--SGAC 293
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 36 DIECLKSVKNSLEDPFNYLTTSWNFNNNTEGFICQFTGVDCWHPDENKVLNIRLSDMGLK 95
+I L S K+ L D L W+ N N C F GV C ++KV +I LS L
Sbjct: 13 EIHQLISFKDVLPD--KNLLPDWSSNKNP----CTFDGVTC---RDDKVTSIDLSSKPLN 63
Query: 96 GQFPRGIERCXXXXXXXXXXXXXXXXIPSDISSR--LQYVTSLDLSSNSLSGEIP--SGL 151
F + I +S +TSLDLS NSLSG + + L
Sbjct: 64 VGF-SAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSL 122
Query: 152 ANCTFLNVLKLNNNR--FTGKIPPQLGLLNRIKTFSVASNLLTG 193
+C+ L L +++N F GK+ L LN ++ +++N ++G
Sbjct: 123 GSCSGLKFLNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSISG 165
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 122 IPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNR- 180
IP +S +T LDLS N G +P +C+ L L L++N F+G++P L R
Sbjct: 285 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 344
Query: 181 IKTFSVASNLLTGPVP 196
+K ++ N +G +P
Sbjct: 345 LKVLDLSFNEFSGELP 360
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 178
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 236
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 237 FGVLMWEIFT 246
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 333 IMIKRLEDSQHS-EKE-FLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+ + H+ EKE +SE+ + + +H N+V LLG C L++ Y G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 390 DKLH-PAEHEVMHMDW-PLRLR----IAIGSARGLAWL-HHNCNPRIIHRNISSKCILLD 442
+ L AE ++ D PL LR + A+G+A+L NC IHR+++++ +LL
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLT 186
Query: 443 GDFEPKLSDFGLAR-LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVV 501
K+ DFGLAR +MN D++ N + ++APE V T + DV+S+G++
Sbjct: 187 NGHVAKIGDFGLARDIMN--DSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGIL 243
Query: 502 LLELIT 507
L E+ +
Sbjct: 244 LWEIFS 249
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 25/193 (12%)
Query: 347 EFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL------------- 392
+ +SE+ + + +H+N++ LLG C ++ Y G L + L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 393 --HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
H E ++ D + A ARG+ +L + + IHR+++++ +L+ D K++
Sbjct: 139 PSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GE 509
DFGLAR ++ +D T NG + ++APE + T + DV+SFGV+L E+ T G
Sbjct: 193 DFGLARDIHHIDXXKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 510 RPTHLTNAPESFK 522
P E FK
Sbjct: 251 SPYPGVPVEELFK 263
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 56/301 (18%)
Query: 314 IGTGRTGATYIA----MLP--GGCFIMIKRL-EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+G G G ++A +LP + +K L E S+ + ++F E L ++H+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 367 LGFCVAKKERLLVYSYLENGTLYD---------KLHPAEHEVMHMDWPLRLRIAIGS--A 415
G C + L+V+ Y+ +G L KL +V L +A+ S A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE-FG 474
G+ +L +HR+++++ L+ K+ DFG++R + D + V G
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR---VGGRTML 222
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLN 533
+ ++ PE T + DV+SFGVVL E+ T G++P W L N
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP----------------WYQLSN 266
Query: 534 TNSSLETAIDKSLLGNGFDG------ELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587
T AID G + E++ +R C P++RH++ +V+ L+A+A
Sbjct: 267 TE-----AIDCITQGRELERPRACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQALA 318
Query: 588 E 588
+
Sbjct: 319 Q 319
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 232
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 290
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 291 FGVLMWEIFT 300
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 18/219 (8%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLEDSQ--HSEKEFLSEIN 353
++K T + ++G+G G Y + +P G + IK L ++ + EF+ E
Sbjct: 11 ILKET-ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIG 413
+ S+ H +LV LLG C++ +L V + +G L + +H + + L L +
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQ---LLLNWCVQ 125
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
A+G+ +L R++HR+++++ +L+ K++DFGLARL+ + + +G
Sbjct: 126 IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA--DGGK 180
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ ++A E T + DV+S+GV + EL+T G +P
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 317 GRTGATYIAMLPGGCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375
GR G T +A+ M+K E++ SE ++ LSE N L V H +++ L G C
Sbjct: 49 GRAGYTTVAV------KMLK--ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100
Query: 376 RLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAW--- 420
LL+ Y + G+L L + +D P + +G AW
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 421 --LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
+ + +++HR+++++ IL+ + K+SDFGL+R + D+++ G + +
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR-SQGRI-PVKW 218
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+A E + T + DV+SFGV+L E++T
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 333 IMIKRLEDSQHS-EKE-FLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+ + H+ EKE +SE+ + + +H N+V LLG C L++ Y G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 390 DKLH-PAEHEVMHMDW-PLRLR----IAIGSARGLAWL-HHNCNPRIIHRNISSKCILLD 442
+ L AE ++ D PL LR + A+G+A+L NC IHR+++++ +LL
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLT 194
Query: 443 GDFEPKLSDFGLAR-LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVV 501
K+ DFGLAR +MN D++ N + ++APE V T + DV+S+G++
Sbjct: 195 NGHVAKIGDFGLARDIMN--DSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGIL 251
Query: 502 LLELIT 507
L E+ +
Sbjct: 252 LWEIFS 257
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 17/214 (7%)
Query: 306 NSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLEDSQ--HSEKEFLSEINTLGSV 358
+ ++G+G G Y + +P G + IK L ++ + EF+ E + S+
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
H +LV LLG C++ +L V + +G L + +H EH+ ++ L L + A+G+
Sbjct: 98 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVH--EHKD-NIGSQLLLNWCVQIAKGM 153
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
+L R++HR+++++ +L+ K++DFGLARL+ + + +G + +
Sbjct: 154 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA--DGGKMPIKW 208
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+A E T + DV+S+GV + EL+T G +P
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 56/301 (18%)
Query: 314 IGTGRTGATYIA----MLP--GGCFIMIKRL-EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+G G G ++A +LP + +K L E S+ + ++F E L ++H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 367 LGFCVAKKERLLVYSYLENGTLYD---------KLHPAEHEVMHMDWPLRLRIAIGS--A 415
G C + L+V+ Y+ +G L KL +V L +A+ S A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE-FG 474
G+ +L +HR+++++ L+ K+ DFG++R + D + V G
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR---VGGRTML 199
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLN 533
+ ++ PE T + DV+SFGVVL E+ T G++P W L N
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP----------------WYQLSN 243
Query: 534 TNSSLETAIDKSLLGNGFDG------ELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587
T AID G + E++ +R C P++RH++ +V+ L+A+A
Sbjct: 244 TE-----AIDCITQGRELERPRACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQALA 295
Query: 588 E 588
+
Sbjct: 296 Q 296
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 56/301 (18%)
Query: 314 IGTGRTGATYIA----MLP--GGCFIMIKRL-EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+G G G ++A +LP + +K L E S+ + ++F E L ++H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 367 LGFCVAKKERLLVYSYLENGTLYD---------KLHPAEHEVMHMDWPLRLRIAIGS--A 415
G C + L+V+ Y+ +G L KL +V L +A+ S A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE-FG 474
G+ +L +HR+++++ L+ K+ DFG++R + D + V G
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR---VGGRTML 193
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLN 533
+ ++ PE T + DV+SFGVVL E+ T G++P W L N
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP----------------WYQLSN 237
Query: 534 TNSSLETAIDKSLLGNGFDG------ELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587
T AID G + E++ +R C P++RH++ +V+ L+A+A
Sbjct: 238 TE-----AIDCITQGRELERPRACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQALA 289
Query: 588 E 588
+
Sbjct: 290 Q 290
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + K++DFGLAR +N +D T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 333 IMIKRLED--SQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+D ++ + +SE+ + + +H+N++ LLG C ++ Y G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 390 DKLHPAEHEVMHMDWPLR------------LRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
+ L M + + + ARG+ +L + + IHR+++++
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497
+L+ + +++DFGLAR +N +D + T NG + ++APE V T + DV+S
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKT-TNGRLP-VKWMAPEALFDRVYTHQSDVWS 244
Query: 498 FGVVLLELIT 507
FGV++ E+ T
Sbjct: 245 FGVLMWEIFT 254
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLG--FCVAKKERLLVYSYLENG 386
G + +K+L+ S +++F EI L ++ +V G + ++ LV YL +G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
L D L + +D L + +G+ +L R +HR+++++ IL++ +
Sbjct: 99 CLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 152
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K++DFGLA+L+ P+D + + APE + + + DV+SFGVVL EL
Sbjct: 153 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
Query: 507 T 507
T
Sbjct: 212 T 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIM---IKRLED--SQHSEKEFLSEINTLGSVRH 360
N ++IG G G A + M IKR+++ S+ ++F E+ L + H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 361 R-NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLR------------ 407
N++ LLG C + L Y +G L D L + V+ D
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR--VLETDPAFAIANSTASTLSSQ 139
Query: 408 --LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465
L A ARG+ +L + IHRN++++ IL+ ++ K++DFGL+R
Sbjct: 140 QLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQ------- 189
Query: 466 STFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+V G L ++A E V T DV+S+GV+L E+++
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLG--FCVAKKERLLVYSYLENG 386
G + +K+L+ S +++F EI L ++ +V G + ++ LV YL +G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
L D L + +D L + +G+ +L R +HR+++++ IL++ +
Sbjct: 112 CLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 165
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K++DFGLA+L+ P+D + + APE + + + DV+SFGVVL EL
Sbjct: 166 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
Query: 507 T 507
T
Sbjct: 225 T 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 128 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 178
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 330 GCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLG--FCVAKKERLLVYSYLENG 386
G + +K+L+ S +++F EI L ++ +V G + ++ LV YL +G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
L D L + +D L + +G+ +L R +HR+++++ IL++ +
Sbjct: 100 CLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 153
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
K++DFGLA+L+ P+D + + APE + + + DV+SFGVVL EL
Sbjct: 154 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
Query: 507 T 507
T
Sbjct: 213 T 213
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 128 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 178
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 24/227 (10%)
Query: 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEF 348
M L ++K T F K ++G+G G Y + +P G + IK L + S + KE
Sbjct: 3 MALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWP 405
L E + SV + ++ LLG C+ +L+ + G L D + + + ++W
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWC 120
Query: 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465
+++ A G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 121 VQI------AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 172 HA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 129 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 179
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 317 GRTGATYIAMLPGGCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375
GR G T +A+ M+K E++ SE ++ LSE N L V H +++ L G C
Sbjct: 49 GRAGYTTVAV------KMLK--ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100
Query: 376 RLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAW--- 420
LL+ Y + G+L L + +D P + +G AW
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 421 --LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
+ + +++HR+++++ IL+ + K+SDFGL+R + D+ + G + +
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR-SQGRI-PVKW 218
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+A E + T + DV+SFGV+L E++T
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 112/225 (49%), Gaps = 24/225 (10%)
Query: 298 LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLS 350
L ++K T F K ++G+G G Y + +P G + IK L + S + KE L
Sbjct: 8 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLR 407
E + SV + ++ LLG C+ +L+ + G L D + + + ++W ++
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
+ A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 126 I------AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 177 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 30/238 (12%)
Query: 291 KSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFL 349
+S++++ LS L F ++G G G Y + G IK ++ + E+E
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK 68
Query: 350 SEINTLGSV-RHRNLVPLLGFCVAK------KERLLVYSYLENGTLYDKLHPAEHEVMHM 402
EIN L HRN+ G + K + LV + G++ D + + +
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 403 DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
+W + I RGL+ LH + ++IHR+I + +LL + E KL DFG++ ++
Sbjct: 129 EWIAYICREI--LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Query: 463 THLSTFVNGEFGDLGYVAPEYPRTLVATP---------KGDVYSFGVVLLELITGERP 511
+TF+ + ++APE ++A K D++S G+ +E+ G P
Sbjct: 184 GRRNTFIGTPY----WMAPE----VIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 130 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 180
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 131 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 181
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 127 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 177
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 312 NIIGTGRTGATYIA-MLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
+ GR G + A +L + I ++D Q + E+ E+ +L ++H N++ +G
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG-- 85
Query: 371 VAKK-------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
A+K + L+ ++ E G+L D L + + W IA ARGLA+LH
Sbjct: 86 -AEKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHE 139
Query: 424 NC-------NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
+ P I HR+I SK +LL + ++DFGLA + T +G+ G
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT--HGQVGTR 197
Query: 477 GYVAPEYPRTLV-----ATPKGDVYSFGVVLLELIT 507
Y+APE + A + D+Y+ G+VL EL +
Sbjct: 198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 17/217 (7%)
Query: 298 LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMI----KRLEDS--QHSEKEFLS 350
L+ + K T K ++G+G G + + +P G I I K +ED + S +
Sbjct: 24 LARIFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 82
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
+ +GS+ H ++V LLG C +L V YL G+L D H +H + L L
Sbjct: 83 HMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLD--HVRQHRGA-LGPQLLLNW 138
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
+ A+G+ +L + ++HRN++++ +LL + +++DFG+A L+ P D L +
Sbjct: 139 GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL--LYS 193
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+ ++A E T + DV+S+GV + EL+T
Sbjct: 194 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 127 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 177
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 130 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 180
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 127 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 177
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 130 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 180
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 18/222 (8%)
Query: 298 LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMI----KRLEDS--QHSEKEFLS 350
L+ + K T K ++G+G G + + +P G I I K +ED + S +
Sbjct: 6 LARIFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 64
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
+ +GS+ H ++V LLG C +L V YL G+L D H +H + L L
Sbjct: 65 HMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLD--HVRQHRGA-LGPQLLLNW 120
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
+ A+G+ +L + ++HRN++++ +LL + +++DFG+A L+ P D L +
Sbjct: 121 GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL--LYS 175
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ ++A E T + DV+S+GV + EL+T G P
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 136
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 137 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 187
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 298 LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGG------CFIMIKRLEDSQHSEKEFLS 350
L ++K T F K ++G+G G Y + +P G IM R S + KE L
Sbjct: 42 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILD 100
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLR 407
E + SV + ++ LLG C+ +L+ + G L D + + + ++W ++
Sbjct: 101 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 159
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
+ A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 160 I------AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 211 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 151
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 152 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 202
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 120
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 121 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 171
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 130 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 180
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 132
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 133 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 183
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 129 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 179
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + E G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTELCGTLD 171
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 134 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 184
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+F+ E+N + S+ HRNL+ L G + ++ V G+L D+L +H+ + L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR--KHQGHFLLGTL 117
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
R A+ A G+ +L + R IHR+++++ +LL K+ DFGL R + D H
Sbjct: 118 S-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-- 171
Query: 467 TFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+V E + + APE +T + D + FGV L E+ T G+ P
Sbjct: 172 -YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 314 IGTGRTGATYIAMLPGGC------FIMIKRLED-SQHSEKEFLSEINTLGSVRHRNLVPL 366
+G G G ++A C + +K L+D S ++ K+F E L +++H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 367 LGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWP-------LRLRIAIGSARG 417
G CV ++V+ Y+++G L + + H + +M P L IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE-FGDL 476
+ +L + +HR+++++ L+ + K+ DFG++R + D + V G +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR---VGGHTMLPI 194
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
++ PE T + DV+S GVVL E+ T G++P
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 138
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 139 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 189
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 233
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 124
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 175
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 299 SDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINT 354
+D ++ IG G +A + G + +K ++ +Q S ++ E+
Sbjct: 8 TDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRI 67
Query: 355 LGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGS 414
+ + H N+V L +K LV Y G ++D L V H ++ + A
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL------VAH--GRMKEKEARAK 119
Query: 415 ARGLAWLHHNCNPR-IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
R + C+ + I+HR++ ++ +LLDGD K++DFG + V L TF
Sbjct: 120 FRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDTFC---- 174
Query: 474 GDLGYVAPE-YPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
G Y APE + P+ DV+S GV+L L++G P N E
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 126
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 177
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIM---IKRLED--SQHSEKEFLSEINTLGSVRH 360
N ++IG G G A + M IKR+++ S+ ++F E+ L + H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 361 R-NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLR------------ 407
N++ LLG C + L Y +G L D L + V+ D
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR--VLETDPAFAIANSTASTLSSQ 132
Query: 408 --LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465
L A ARG+ +L + IHR+++++ IL+ ++ K++DFGL+R
Sbjct: 133 QLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQ------- 182
Query: 466 STFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+V G L ++A E V T DV+S+GV+L E+++
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
+G GR G + G I R E S E E + + +RH N++ +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTV----MLRHENILGFIASD 100
Query: 371 VAKK----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH---- 422
+ + + L+ Y E G+LYD L ++ +D LRI + A GLA LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 423 -HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
P I HR++ SK IL+ + + ++D GLA + + L N G Y+AP
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 482 EYPRTLV------ATPKGDVYSFGVVLLEL 505
E + + + D+++FG+VL E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIM---IKRLED--SQHSEKEFLSEINTLGSVRH 360
N ++IG G G A + M IKR+++ S+ ++F E+ L + H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 361 R-NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLR------------ 407
N++ LLG C + L Y +G L D L + V+ D
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR--VLETDPAFAIANSTASTLSSQ 142
Query: 408 --LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465
L A ARG+ +L + IHR+++++ IL+ ++ K++DFGL+R
Sbjct: 143 QLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQ------- 192
Query: 466 STFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+V G L ++A E V T DV+S+GV+L E+++
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 294 EKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE---KEFLS 350
E + LM+ K +G G G Y A G + +KR+ E +
Sbjct: 12 ENLYFQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR 68
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI+ L + H N+V L+ +++ LV+ ++E K E++ D +++ +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL---KKVLDENKTGLQDSQIKIYL 125
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFV 469
RG+A H + RI+HR++ + +L++ D KL+DFGLAR PV ++ V
Sbjct: 126 -YQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 470 NGEFGDLGYVAPEYPRTLVATPKG----DVYSFGVVLLELITGE 509
L Y AP+ L+ + K D++S G + E+ITG+
Sbjct: 182 T-----LWYRAPD---VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 172
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 317 GRTGATYIAMLPGGCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375
GR G T +A+ M+K E++ SE ++ LSE N L V H +++ L G C
Sbjct: 49 GRAGYTTVAV------KMLK--ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100
Query: 376 RLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAW--- 420
LL+ Y + G+L L + +D P + +G AW
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 421 --LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
+ + ++HR+++++ IL+ + K+SDFGL+R + D+ + G + +
Sbjct: 161 QGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR-SQGRI-PVKW 218
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+A E + T + DV+SFGV+L E++T
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+F+ E+N + S+ HRNL+ L G + ++ V G+L D+L +H+ + L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR--KHQGHFLLGTL 117
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
R A+ A G+ +L + R IHR+++++ +LL K+ DFGL R + D H
Sbjct: 118 S-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-- 171
Query: 467 TFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+V E + + APE +T + D + FGV L E+ T G+ P
Sbjct: 172 -YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+F+ E+N + S+ HRNL+ L G + ++ V G+L D+L +H+ + L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR--KHQGHFLLGTL 113
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
R A+ A G+ +L + R IHR+++++ +LL K+ DFGL R + D H
Sbjct: 114 S-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-- 167
Query: 467 TFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+V E + + APE +T + D + FGV L E+ T G+ P
Sbjct: 168 -YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
+G GR G + G I R E S E E + + +RH N++ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTV----MLRHENILGFIASD 71
Query: 371 VAKK----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH---- 422
+ + + L+ Y E G+LYD L ++ +D LRI + A GLA LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 423 -HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
P I HR++ SK IL+ + + ++D GLA + + L N G Y+AP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 482 EYPRTLV------ATPKGDVYSFGVVLLEL 505
E + + + D+++FG+VL E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+F+ E+N + S+ HRNL+ L G + ++ V G+L D+L +H+ + L
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR--KHQGHFLLGTL 123
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
R A+ A G+ +L + R IHR+++++ +LL K+ DFGL R + D H
Sbjct: 124 S-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-- 177
Query: 467 TFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+V E + + APE +T + D + FGV L E+ T G+ P
Sbjct: 178 -YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 33/213 (15%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
+G GR G + G I R E S E E + + +RH N+ LGF
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTV----MLRHENI---LGFI 68
Query: 371 VA-------KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH- 422
+ + L+ Y E G+LYD L ++ +D LRI + A GLA LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 423 ----HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
P I HR++ SK IL+ + + ++D GLA + + L N G Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 479 VAPEYPRTLV------ATPKGDVYSFGVVLLEL 505
+APE + + + D+++FG+VL E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y G +Y +L ++ D A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ----KLSKFDEQRTATYITELANAL 126
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 177
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 294 EKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE---KEFLS 350
E + LM+ K +G G G Y A G + +KR+ E +
Sbjct: 12 ENLYFQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR 68
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI+ L + H N+V L+ +++ LV+ ++E K E++ D +++ +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL---KKVLDENKTGLQDSQIKIYL 125
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFV 469
RG+A H + RI+HR++ + +L++ D KL+DFGLAR PV ++ V
Sbjct: 126 -YQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 470 NGEFGDLGYVAPEYPRTLVATPKG----DVYSFGVVLLELITGE 509
L Y AP+ L+ + K D++S G + E+ITG+
Sbjct: 182 T-----LWYRAPD---VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+F+ E+N + S+ HRNL+ L G + ++ V G+L D+L +H+ + L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR--KHQGHFLLGTL 113
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
R A+ A G+ +L + R IHR+++++ +LL K+ DFGL R + D H
Sbjct: 114 S-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-- 167
Query: 467 TFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+V E + + APE +T + D + FGV L E+ T G+ P
Sbjct: 168 -YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 147
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 148 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 198
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 122
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + T G L Y
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLC----GTLDY 173
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 125
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 176
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 120
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 121 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 171
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 215
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 124
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 175
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 147
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + + G L
Sbjct: 148 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLD 197
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 314 IGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
IG G TG +A G + +K ++ + +E L +E+ + +H N+V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 372 AKKERLLVYSYLENGTLYD---KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
+E ++ +L+ G L D ++ E ++ + + LA+LH
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQIA--------TVCEAVLQALAYLHAQG--- 161
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEY-PRTL 487
+IHR+I S ILL D KLSDFG ++ V + ++APE R+L
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPY----WMAPEVISRSL 217
Query: 488 VATPKGDVYSFGVVLLELITGERPTHLTNAP 518
AT + D++S G++++E++ GE P + +++P
Sbjct: 218 YAT-EVDIWSLGIMVIEMVDGE-PPYFSDSP 246
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + + G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 171
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 30/195 (15%)
Query: 333 IMIKRLEDSQHS-EKE-FLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTL- 388
+ +K L+ + H+ EKE +SE+ + + +H N+V LLG C L++ Y G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 389 --------------YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL-HHNCNPRIIHRN 433
Y+ H E ++ D L + A+G+A+L NC IHR+
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRD---LLHFSSQVAQGMAFLASKNC----IHRD 191
Query: 434 ISSKCILLDGDFEPKLSDFGLAR-LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
++++ +LL K+ DFGLAR +MN D++ N + ++APE V T +
Sbjct: 192 VAARNVLLTNGHVAKIGDFGLARDIMN--DSNYIVKGNARL-PVKWMAPESIFDCVYTVQ 248
Query: 493 GDVYSFGVVLLELIT 507
DV+S+G++L E+ +
Sbjct: 249 SDVWSYGILLWEIFS 263
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG------CFIMIKRLEDSQHSEKEFLSEIN 353
++K T K ++G+G G Y + +P G I + R S + KE L E
Sbjct: 13 ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD---WPLRLRI 410
+ V + LLG C+ +L V + G L D + + D W +++
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI-- 128
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+++L + R++HR+++++ +L+ K++DFGLARL++ +T +
Sbjct: 129 ----AKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA--D 179
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E T + DV+S+GV + EL+T G +P
Sbjct: 180 GGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + + G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 171
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 21/187 (11%)
Query: 330 GCFIMIKRL---EDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386
G + IK+ +D + +K + EI L +RH NLV LL C KK LV+ ++++
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 387 TLYD-KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDGD 444
L D +L P +D+ + + G+ + H HN IIHR+I + IL+
Sbjct: 110 ILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSHN----IIHRDIKPENILVSQS 160
Query: 445 FEPKLSDFGLAR-LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-DVYSFGVVL 502
KL DFG AR L P + + + E Y APE V K DV++ G ++
Sbjct: 161 GVVKLCDFGFARTLAAPGEVY-----DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV 215
Query: 503 LELITGE 509
E+ GE
Sbjct: 216 TEMFMGE 222
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 122
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + + G L
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 172
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+F+ E+N + S+ HRNL+ L G + ++ V G+L D+L +H+ + L
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR--KHQGHFLLGTL 123
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
R A+ A G+ +L + R IHR+++++ +LL K+ DFGL R + D H
Sbjct: 124 S-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + + APE +T + D + FGV L E+ T G+ P
Sbjct: 180 MQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 126
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 177
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE K D++S GV+ E + G+ P E++K
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 126
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + + G L
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 176
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+F+ E+N + S+ HRNL+ L G + ++ V G+L D+L +H+ + L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR--KHQGHFLLGTL 113
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
R A+ A G+ +L + R IHR+++++ +LL K+ DFGL R + D H
Sbjct: 114 S-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
Query: 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + + APE +T + D + FGV L E+ T G+ P
Sbjct: 170 MQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
T SF + ++I + G Y + ++ RL+ +H+ E L L V H +
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV--RLKQVEHTNDERL----MLSIVTHPFI 68
Query: 364 VPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
+ + G ++ ++ Y+E G L+ L ++ P+ A L +LH
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR----FPNPVAKFYAAEVCLALEYLH- 123
Query: 424 NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEY 483
+ II+R++ + ILLD + K++DFG A+ + V L G Y+APE
Sbjct: 124 --SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-------GTPDYIAPEV 174
Query: 484 PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
T D +SFG+++ E++ G P + +N ++++ L
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 57/316 (18%)
Query: 308 FSKNNI-----IGTGRTGATYIAMLPG------GCFIMIKRL--EDSQHSEKEFLSEINT 354
+ +NNI IG G G + A PG + +K L E S + +F E
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 355 LGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHP-AEHEVM---HMDWPLRLR- 409
+ + N+V LLG C K L++ Y+ G L + L + H V H D R R
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 410 ---------------IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454
IA A G+A+L + +HR+++++ L+ + K++DFGL
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
+R + D + + + + ++ PE T + DV+++GVVL E+ + G +P
Sbjct: 221 SRNIYSADYYKAD--GNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP-- 276
Query: 514 LTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKER 573
+ G E + + ++ + L EL+ +R+ C P +R
Sbjct: 277 -------YYGMAHEEVIYYVRDGNILACPENCPL------ELYNLMRL---CWSKLPADR 320
Query: 574 HTMFEVYQLLRAIAER 589
+ ++++L+ + ER
Sbjct: 321 PSFCSIHRILQRMCER 336
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 124
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + + G L
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLD 174
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 124
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + G L
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 174
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 118
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + ++ + +T G L Y
Sbjct: 119 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 169
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRL---EDSQHSEKEFLSEINTLGSVRHR 361
+ K IG G G + G + IK+ ED +K L EI L ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYD----KLHPAEHEVMHMDWPLRLRIAIGSARG 417
NLV LL K+ LV+ Y ++ L++ + EH V + W + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW--------QTLQA 114
Query: 418 LAWLH-HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
+ + H HNC IHR++ + IL+ KL DFG ARL+ T S + + E
Sbjct: 115 VNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLL----TGPSDYYDDEVATR 166
Query: 477 GYVAPEYPRTLVAT----PKGDVYSFGVVLLELITG 508
Y +PE LV P DV++ G V EL++G
Sbjct: 167 WYRSPE---LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI L RH +++ L + +V Y+ G L+D + +H + RL
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQ 118
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
I SA H ++HR++ + +LLD K++DFGL+ +M+ F+
Sbjct: 119 QILSAVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-----GEFLR 168
Query: 471 GEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
G Y APE L A P+ D++S GV+L L+ G P + P FK
Sbjct: 169 DSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFK 221
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENGTLYDKLHPAEHEVMHMDWPLR 407
EI+ L ++ H +++ G C + E+ LV Y+ G+L D L H +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSI---GLAQL 119
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
L A G+A+LH + IHRN++++ +LLD D K+ DFGLA+ + +
Sbjct: 120 LLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+G+ + + APE + DV+SFGV L EL+T
Sbjct: 177 REDGD-SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFG A+L+ +
Sbjct: 131 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--E 181
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI L RH +++ L + +V Y+ G L+D + +H + RL
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQ 118
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
I SA H ++HR++ + +LLD K++DFGL+ +M+ F+
Sbjct: 119 QILSAVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-----GEFLR 168
Query: 471 GEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
G Y APE L A P+ D++S GV+L L+ G P + P FK
Sbjct: 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFK 221
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 122
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA-RLMNPVDTHLSTFVNGEFGDLG 477
++ H + R+IHR+I + +LL E K++DFG + + T LS G L
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-------GTLD 172
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFG A+L+ +
Sbjct: 129 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--E 179
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++ +G G Y + +P G + IK L + S + KE L E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 134 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 184
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L++ + G L D + + + ++W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFG A+L+ +
Sbjct: 129 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--E 179
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 171
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 19/212 (8%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGF 369
IG G +A + G + IK ++ +Q S ++ E+ + + H N+V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 370 CVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN-PR 428
+K L+ Y G ++D L V H ++ + A R + C+ R
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYL------VAH--GRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTL 487
I+HR++ ++ +LLD D K++DFG + V L TF G Y APE +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDTFC----GSPPYAAPELFQGKK 186
Query: 488 VATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
P+ DV+S GV+L L++G P N E
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 218
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++ +G G Y + +P G + IK L + S + KE L E
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 127 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 177
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFG A+L+ +
Sbjct: 127 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--E 177
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFG A+L+ +
Sbjct: 134 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--E 184
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++ +G G Y + +P G + IK L + S + KE L E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFGLA+L+ +
Sbjct: 134 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--E 184
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y G +Y +L ++ D A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ----KLSKFDEQRTATYITELANAL 126
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + + P S+ G L Y
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAP-----SSRRXXLXGTLDY 177
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA--KKERLLVYSYLENGTLYDKLHPAEHE 398
S ++F E L H N++P+LG C + L+ ++ G+LY+ LH +
Sbjct: 47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF 106
Query: 399 VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
V+ D ++ A+ ARG+A+LH P I ++S+ +++D D ++S
Sbjct: 107 VV--DQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISM------- 156
Query: 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK------GDVYSFGVVLLELITGERP 511
D S G +VAPE L P+ D++SF V+L EL+T E P
Sbjct: 157 --ADVKFSFQSPGRMYAPAWVAPE---ALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 123
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K+++FG + ++ + +T G L Y
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLC----GTLDY 174
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 123
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + G L
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLD 173
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENGTLYDKLHPAEHEVMHMDWPLR 407
EI+ L ++ H +++ G C + E+ LV Y+ G+L D L H +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSI---GLAQL 119
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
L A G+A+LH IHRN++++ +LLD D K+ DFGLA+ + +
Sbjct: 120 LLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+G+ + + APE + DV+SFGV L EL+T
Sbjct: 177 REDGD-SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI L + G + + ++ YL G+ D L P + + LR
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 133
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+ +GL +LH + + IHR+I + +LL E KL+DFG+A + +TFV
Sbjct: 134 L-----KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
Query: 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
F ++APE + K D++S G+ +EL GE P
Sbjct: 186 GTPF----WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 301 LMKATNSFSKNNIIGTGRTGATYIAM-LPGG----CFIMIKRLED--SQHSEKEFLSEIN 353
++K T F K ++G+G G Y + +P G + IK L + S + KE L E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 354 TLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEV---MHMDWPLRLRI 410
+ SV + ++ LLG C+ +L+ + G L D + + + ++W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A+G+ +L + R++HR+++++ +L+ K++DFG A+L+ +
Sbjct: 129 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--E 179
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
G + ++A E + T + DV+S+GV + EL+T G +P
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 123/272 (45%), Gaps = 39/272 (14%)
Query: 332 FIMIKRLED-SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL-- 388
+ +K L+D + + K+F E L +++H ++V G C ++V+ Y+++G L
Sbjct: 47 LVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNK 106
Query: 389 YDKLHPAEHEVMHMDWPLR----------LRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438
+ + H + ++ P + L IA A G+ +L + +HR+++++
Sbjct: 107 FLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRN 163
Query: 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE-FGDLGYVAPEYPRTLVATPKGDVYS 497
L+ + K+ DFG++R + D + V G + ++ PE T + DV+S
Sbjct: 164 CLVGANLLVKIGDFGMSRDVYSTDYYR---VGGHTMLPIRWMPPESIMYRKFTTESDVWS 220
Query: 498 FGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELH 556
FGV+L E+ T G++P F+ S E I + LE + +D
Sbjct: 221 FGVILWEIFTYGKQPW--------FQLSNTEVIECITQGRVLERP--RVCPKEVYD---- 266
Query: 557 QFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588
V C P++R + E+Y++L A+ +
Sbjct: 267 ----VMLGCWQREPQQRLNIKEIYKILHALGK 294
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K++DFG + + P S+ G L Y
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAP-----SSRRTXLCGTLDY 172
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 24/191 (12%)
Query: 333 IMIKRLEDSQHS-EKE-FLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+ + H+ EKE +SE+ + + +H N+V LLG C L++ Y G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 390 DKLHPAEHEVMHMDWPLRLRIAIGS-----------ARGLAWL-HHNCNPRIIHRNISSK 437
+ L + V+ D + + S A+G+A+L NC IHR+++++
Sbjct: 139 NFLR-RKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAAR 193
Query: 438 CILLDGDFEPKLSDFGLAR-LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVY 496
+LL K+ DFGLAR +MN D++ N + ++APE V T + DV+
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMN--DSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVW 250
Query: 497 SFGVVLLELIT 507
S+G++L E+ +
Sbjct: 251 SYGILLWEIFS 261
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIK--RLEDSQHSEKEFLSEINTLGSV 358
M +++ F + +G G Y + G ++ +K +L+ + + + EI+ + +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENG--------TLYDKLHPAE-HEVMHMDWPLRLR 409
+H N+V L + + LV+ +++N T+ + E + V + W L
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--- 117
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTF 468
+GLA+ H N +I+HR++ + +L++ + KL DFGLAR PV+T S
Sbjct: 118 -----LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 469 VNGEFGDLGYVAPEY---PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
V L Y AP+ RT + D++S G +L E+ITG+ TN E K
Sbjct: 170 VT-----LWYRAPDVLMGSRTYSTSI--DIWSCGCILAEMITGKPLFPGTNDEEQLK 219
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 124
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
++ H + R+IHR+I + +LL E K+++FG + ++ + +T G L Y
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLC----GTLDY 175
Query: 479 VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 308 FSKNNIIGTGRTGATYIAM---LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLV 364
F+K + IG G G Y + I I LE+++ ++ EI L +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 365 PLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHN 424
G + + ++ YL G+ D L P E ++ LR + +GL +LH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL-----KGLDYLH-- 133
Query: 425 CNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP 484
+ R IHR+I + +LL + KL+DFG+A + + FV F ++APE
Sbjct: 134 -SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF----WMAPEVI 188
Query: 485 RTLVATPKGDVYSFGVVLLELITGERP 511
+ K D++S G+ +EL GE P
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI L RH +++ L + +V Y+ G L+D + +D R+
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR----LDEKESRRL 121
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
G+ + H + ++HR++ + +LLD K++DFGL+ +M+ F+
Sbjct: 122 FQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-----GEFLR 173
Query: 471 GEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
G Y APE L A P+ D++S GV+L L+ G P + P FK
Sbjct: 174 XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK 226
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLD 171
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 124
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + R+IHR+I + +LL E K++DFG + H + G L
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLD 174
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P E++K
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 304 ATNSF---SKNNIIGTGRTGA------TYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINT 354
A NSF SK I+G GR G T + I + ++D + E +EI+
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE----EVKNEISV 139
Query: 355 LGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGS 414
+ + H NL+ L +K + +LV Y++ G L+D++ + + +D L ++
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEG 199
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCIL-LDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGE 472
R + ++ I+H ++ + IL ++ D + K+ DFGLAR P + +
Sbjct: 200 IRHMHQMY------ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-----LKVN 248
Query: 473 FGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV 526
FG ++APE + D++S GV+ L++G P N E+ L
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA 302
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 19/212 (8%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGF 369
IG G +A + G + +K ++ +Q S ++ E+ + + H N+V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 370 CVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR- 428
+K LV Y G ++D L V H W ++ + A R + C+ +
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYL------VAH-GW-MKEKEARAKFRQIVSAVQYCHQKF 126
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTL 487
I+HR++ ++ +LLD D K++DFG + L TF G Y APE +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFC----GSPPYAAPELFQGKK 181
Query: 488 VATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
P+ DV+S GV+L L++G P N E
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI L + G + + ++ YL G+ D L P + + LR
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+ +GL +LH + + IHR+I + +LL E KL+DFG+A + +TFV
Sbjct: 114 L-----KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
F ++APE + K D++S G+ +EL GE P
Sbjct: 166 GTPF----WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 297 RLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIK------RLEDSQHSE-KEFL 349
+L D++ N I+G G G+ L +K +L++S E +EFL
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKER-----LLVYSYLENGTLYDKLHPAEHEVMHMDW 404
SE + H N++ LLG C+ + +++ +++ G L+ L + E
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 405 PLR--LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
PL+ L+ + A G+ +L N +HR+++++ +L D ++DFGL++ + D
Sbjct: 145 PLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
Query: 463 THLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+ G + ++A E V T K DV++FGV + E+ T
Sbjct: 202 ----YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 24/191 (12%)
Query: 333 IMIKRLEDSQHS-EKE-FLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+ + H+ EKE +SE+ + + +H N+V LLG C L++ Y G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 390 DKLHPAEHEVMHMDWPLR-----------LRIAIGSARGLAWL-HHNCNPRIIHRNISSK 437
+ L + V+ D L + A+G+A+L NC IHR+++++
Sbjct: 139 NFLR-RKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAAR 193
Query: 438 CILLDGDFEPKLSDFGLAR-LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVY 496
+LL K+ DFGLAR +MN D++ N + ++APE V T + DV+
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMN--DSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVW 250
Query: 497 SFGVVLLELIT 507
S+G++L E+ +
Sbjct: 251 SYGILLWEIFS 261
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 294 EKMRLSDLMKATNSFSKNNIIGTGRTGA-TYIAMLPGGCFIMIK--RLEDSQHSEKEFLS 350
+K ++ +L + F + + +G G G T + P G + K LE + +
Sbjct: 6 QKAKVGEL--KDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR 63
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
E+ L +V G + E + +++ G+L L E + + ++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----EAKRIPEEILGKV 119
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
+I RGLA+L +I+HR++ IL++ E KL DFG++ + +D+ ++FV
Sbjct: 120 SIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV- 174
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
G Y+APE + + + D++S G+ L+EL G P +A E
Sbjct: 175 ---GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGF 369
IG G +A + G + +K ++ +Q S ++ E+ + + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 370 CVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR- 428
+K LV Y G ++D L V H ++ + A R + C+ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL------VAH--GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTL 487
I+HR++ ++ +LLD D K++DFG + L TF G Y APE +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFC----GSPPYAAPELFQGKK 188
Query: 488 VATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
P+ DV+S GV+L L++G P N E
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGF 369
IG G +A + G + +K ++ +Q S ++ E+ + + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 370 CVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR- 428
+K LV Y G ++D L V H ++ + A R + C+ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL------VAH--GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTL 487
I+HR++ ++ +LLD D K++DFG + L TF G Y APE +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFC----GSPPYAAPELFQGKK 188
Query: 488 VATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
P+ DV+S GV+L L++G P N E
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 313 IIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINT--LGSVRHRNLVPLLG-- 368
+IG GR GA Y L + +K S + + F++E N + + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSLDERP-VAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFIVGD 76
Query: 369 ---FCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH- 422
+ E LLV Y NG+L Y LH + DW R+A RGLA+LH
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-------DWVSSCRLAHSVTRGLAYLHT 129
Query: 423 -----HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA------RLMNPVDTHLSTFVNG 471
+ P I HR+++S+ +L+ D +SDFGL+ RL+ P + +
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI--S 187
Query: 472 EFGDLGYVAPEYPRTLV-------ATPKGDVYSFGVVLLEL 505
E G + Y+APE V A + D+Y+ G++ E+
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
IG GR G + G I R E S E E + +RH N+ LGF
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENI---LGFI 102
Query: 371 VAKK-------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
A + LV Y E+G+L+D L+ V M +++A+ +A GLA LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 157
Query: 424 NC-----NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
P I HR++ SK IL+ + ++D GLA + + N G Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 479 VAPEY------PRTLVATPKGDVYSFGVVLLEL 505
+APE + + + D+Y+ G+V E+
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
IG GR G + G I R E S E E + +RH N+ LGF
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENI---LGFI 64
Query: 371 VAKK-------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
A + LV Y E+G+L+D L+ V M +++A+ +A GLA LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 119
Query: 424 NC-----NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
P I HR++ SK IL+ + ++D GLA + + N G Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 479 VAPEY------PRTLVATPKGDVYSFGVVLLEL 505
+APE + + + D+Y+ G+V E+
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
IG GR G + G I R E S E E + +RH N+ LGF
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENI---LGFI 89
Query: 371 VAKK-------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
A + LV Y E+G+L+D L+ V M +++A+ +A GLA LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 144
Query: 424 NC-----NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
P I HR++ SK IL+ + ++D GLA + + N G Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 479 VAPEY------PRTLVATPKGDVYSFGVVLLEL 505
+APE + + + D+Y+ G+V E+
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
IG GR G + G I R E S E E + +RH N+ LGF
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENI---LGFI 63
Query: 371 VAKK-------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
A + LV Y E+G+L+D L+ V M +++A+ +A GLA LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 118
Query: 424 NC-----NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
P I HR++ SK IL+ + ++D GLA + + N G Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 479 VAPEY------PRTLVATPKGDVYSFGVVLLEL 505
+APE + + + D+Y+ G+V E+
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
IG GR G + G I R E S E E + +RH N+ LGF
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENI---LGFI 69
Query: 371 VAKK-------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
A + LV Y E+G+L+D L+ V M +++A+ +A GLA LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 124
Query: 424 NC-----NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
P I HR++ SK IL+ + ++D GLA + + N G Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 479 VAPEY------PRTLVATPKGDVYSFGVVLLEL 505
+APE + + + D+Y+ G+V E+
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 18/222 (8%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSVRH 360
F +G G+ G Y+A FI+ +K L +Q E + E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 361 RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW 420
N++ L G+ L+ Y GT+Y +L ++ D A L++
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSRFDEQRTATYITELANALSY 127
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVA 480
H + R+IHR+I + +LL + E K++DFG + ++ + +T G L Y+
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLC----GTLDYLP 178
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
PE + K D++S GV+ E + G P E+++
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGF 369
IG G +A + G + IK ++ +Q S ++ E+ + + H N+V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 370 CVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN-PR 428
+K L+ Y G ++D L V H ++ + A R + C+ R
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYL------VAH--GRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTL 487
I+HR++ ++ +LLD D K++DFG + V L F G Y APE +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDAFC----GAPPYAAPELFQGKK 189
Query: 488 VATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
P+ DV+S GV+L L++G P N E
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 334 MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLH 393
+I + + + S ++ E+ + + H N+V L +K LV Y G ++D L
Sbjct: 46 IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL- 104
Query: 394 PAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR-IIHRNISSKCILLDGDFEPKLSDF 452
V H ++ + A R + C+ + I+HR++ ++ +LLD D K++DF
Sbjct: 105 -----VAH--GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTLVATPKGDVYSFGVVLLELITGERP 511
G + L TF G Y APE + P+ DV+S GV+L L++G P
Sbjct: 158 GFSNEFT-FGNKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 512 THLTNAPE 519
N E
Sbjct: 213 FDGQNLKE 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 314 IGTGRTGATYIAMLPG---GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
IG GR G + G I R E S E E + +RH N+ LGF
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENI---LGFI 66
Query: 371 VAKK-------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH 423
A + LV Y E+G+L+D L+ V M +++A+ +A GLA LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 121
Query: 424 NC-----NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
P I HR++ SK IL+ + ++D GLA + + N G Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 479 VAPEY------PRTLVATPKGDVYSFGVVLLEL 505
+APE + + + D+Y+ G+V E+
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSV 358
A F +G G+ G Y+A FI+ +K L +Q E + E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
RH N++ L G+ L+ Y GT+Y +L ++ D A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANAL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLG 477
++ H + ++IHR+I + +LL E K++DFG + H + G L
Sbjct: 122 SYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 171
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+ PE + K D++S GV+ E + G+ P +++K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYK 216
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 31/199 (15%)
Query: 333 IMIKRLEDSQHS-EKE-FLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389
+ +K L+ + H+ EKE +SE+ + + +H N+V LLG C L++ Y G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 390 DKLHPAEHEVM---------------HMDWPLRLR----IAIGSARGLAWL-HHNCNPRI 429
+ L ++ PL LR + A+G+A+L NC
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC---- 179
Query: 430 IHRNISSKCILLDGDFEPKLSDFGLAR-LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV 488
IHR+++++ +LL K+ DFGLAR +MN D++ N + ++APE V
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMN--DSNYIVKGNARL-PVKWMAPESIFDCV 236
Query: 489 ATPKGDVYSFGVVLLELIT 507
T + DV+S+G++L E+ +
Sbjct: 237 YTVQSDVWSYGILLWEIFS 255
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 18/222 (8%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSVRH 360
F +G G+ G Y+A FI+ +K L +Q E + E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 361 RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW 420
N++ L G+ L+ Y GT+Y +L ++ D A L++
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSRFDEQRTATYITELANALSY 127
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVA 480
H + R+IHR+I + +LL + E K++DFG + ++ + T G L Y+
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLC----GTLDYLP 178
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
PE + K D++S GV+ E + G P E+++
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI+ L +RH +++ L + ++V Y G L+D + E + M D R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYI--VEKKRMTEDEGRRFFQ 115
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
I A + + H + +I+HR++ + +LLD + K++DFGL+ +M F+
Sbjct: 116 QIICA--IEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD-----GNFLK 165
Query: 471 GEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
G Y APE L A P+ DV+S G+VL ++ G P P FK
Sbjct: 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK 218
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHRNLVPLLGFC 370
IG G G Y A G +K++ + E + EI+ L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 371 VAKKERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
KK +LV+ +L+ L D V + L+L G+A+ H + R
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAYCH---DRR 120
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
++HR++ + +L++ + E K++DFGLAR PV + V L Y AP+ L
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT-----LWYRAPD---VL 172
Query: 488 VATPKG----DVYSFGVVLLELITG 508
+ + K D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHRNLVPLLGFC 370
IG G G Y A G +K++ + E + EI+ L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 371 VAKKERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
KK +LV+ +L+ L D V + L+L G+A+ H + R
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAYCH---DRR 120
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
++HR++ + +L++ + E K++DFGLAR PV + V L Y AP+ L
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVT-----LWYRAPD---VL 172
Query: 488 VATPKG----DVYSFGVVLLELITG 508
+ + K D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI L + G + + ++ YL G+ D L P + + LR
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+ +GL +LH + + IHR+I + +LL E KL+DFG+A + + FV
Sbjct: 114 L-----KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 165
Query: 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
F ++APE + K D++S G+ +EL GE P
Sbjct: 166 GTPF----WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI L + G + + ++ YL G+ D L P + + LR
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 128
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+ +GL +LH + + IHR+I + +LL E KL+DFG+A + + FV
Sbjct: 129 L-----KGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 180
Query: 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
F ++APE + K D++S G+ +EL GE P
Sbjct: 181 GTPF----WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHRNLVPLLGFC 370
IG G G Y A G +K++ + E + EI+ L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 371 VAKKERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
KK +LV+ +L+ L D V + L+L G+A+ H + R
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAYCH---DRR 120
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
++HR++ + +L++ + E K++DFGLAR PV + V L Y AP+ L
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVT-----LWYRAPD---VL 172
Query: 488 VATPKG----DVYSFGVVLLELITG 508
+ + K D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI L + G + + ++ YL G+ D L + + L+
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEI 129
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+ +GL +LH + + IHR+I + +LL + KL+DFG+A + +TFV
Sbjct: 130 L-----KGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV 181
Query: 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
F ++APE + K D++S G+ +EL GE P
Sbjct: 182 GTPF----WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 334 MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLH 393
+I + + + S ++ E+ + + H N+V L +K LV Y G ++D L
Sbjct: 46 IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL- 104
Query: 394 PAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR-IIHRNISSKCILLDGDFEPKLSDF 452
V H ++ + A R + C+ + I+HR++ ++ +LLD D K++DF
Sbjct: 105 -----VAH--GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 453 GLARLMNPVDTHLSTFVN--GEF-GDLGYVAPE-YPRTLVATPKGDVYSFGVVLLELITG 508
G + TF N EF G Y APE + P+ DV+S GV+L L++G
Sbjct: 158 GFSNEF--------TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 509 ERPTHLTNAPE 519
P N E
Sbjct: 210 SLPFDGQNLKE 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
EI L ++ H ++V G C + E+ LV Y+ G+L D L H V L
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCV---GLAQLL 115
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
A G+A+LH IHR ++++ +LLD D K+ DFGLA+ + +
Sbjct: 116 LFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 172
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+G+ + + APE + DV+SFGV L EL+T
Sbjct: 173 EDGD-SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
EI L ++ H ++V G C + E+ LV Y+ G+L D L H V L
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCV---GLAQLL 114
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
A G+A+LH IHR ++++ +LLD D K+ DFGLA+ + +
Sbjct: 115 LFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 171
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+G+ + + APE + DV+SFGV L EL+T
Sbjct: 172 EDGD-SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 308 FSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS--QHSEK--EFLSEINTLGSVRHRN 362
FS IG G GA Y A + + IK++ S Q +EK + + E+ L +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ G + + LV Y G+ D L + + ++ + G+ +GLA+LH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH 171
Query: 423 -HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HN +IHR++ + ILL KL DFG A +M P + FV + ++AP
Sbjct: 172 SHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN----XFVGTPY----WMAP 219
Query: 482 EYPRTLVATPKG------DVYSFGVVLLELITGERPTHLTNA 517
E ++A +G DV+S G+ +EL + P NA
Sbjct: 220 E---VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 308 FSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS--QHSEK--EFLSEINTLGSVRHRN 362
FS IG G GA Y A + + IK++ S Q +EK + + E+ L +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+ G + + LV Y G+ D L + + ++ + G+ +GLA+LH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH 132
Query: 423 -HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HN +IHR++ + ILL KL DFG A +M P + FV + ++AP
Sbjct: 133 SHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN----XFVGTPY----WMAP 180
Query: 482 EYPRTLVATPKG------DVYSFGVVLLELITGERPTHLTNA 517
E ++A +G DV+S G+ +EL + P NA
Sbjct: 181 E---VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGF 369
IG G +A + G + +K ++ +Q S ++ E+ + + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 370 CVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR- 428
+K LV Y G ++D L V H ++ + A R + C+ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL------VAH--GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTL 487
I+HR++ ++ +LLD D K++DFG + L F G Y APE +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDAFC----GAPPYAAPELFQGKK 188
Query: 488 VATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
P+ DV+S GV+L L++G P N E
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 78/184 (42%), Gaps = 12/184 (6%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537
APE R A P DV+S G+VL ++ GE P + E T LN
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKK 232
Query: 538 LETA 541
+++A
Sbjct: 233 IDSA 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAI----GSARGLAWLHHNCNPRIIHRN 433
+V Y++ TL D ++H + P+ + AI + + L + H N IIHR+
Sbjct: 93 IVMEYVDGVTLRD--------IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRD 141
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS-TFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I++ K+ DFG+AR + D+ S T G Y++PE R +
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 493 GDVYSFGVVLLELITGERP 511
DVYS G VL E++TGE P
Sbjct: 200 SDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAI----GSARGLAWLHHNCNPRIIHRN 433
+V Y++ TL D ++H + P+ + AI + + L + H N IIHR+
Sbjct: 93 IVMEYVDGVTLRD--------IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRD 141
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS-TFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I++ K+ DFG+AR + D+ S T G Y++PE R +
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 493 GDVYSFGVVLLELITGERP 511
DVYS G VL E++TGE P
Sbjct: 200 SDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAI----GSARGLAWLHHNCNPRIIHRN 433
+V Y++ TL D ++H + P+ + AI + + L + H N IIHR+
Sbjct: 93 IVMEYVDGVTLRD--------IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRD 141
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS-TFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I++ K+ DFG+AR + D+ S T G Y++PE R +
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 493 GDVYSFGVVLLELITGERP 511
DVYS G VL E++TGE P
Sbjct: 200 SDVYSLGCVLYEVLTGEPP 218
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI+ L +RH +++ L +K E ++V Y N L+D + + + M R
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI--VQRDKMSEQEARRFFQ 119
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
I SA + + H + +I+HR++ + +LLD K++DFGL+ +M F+
Sbjct: 120 QIISA--VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-----GNFLK 169
Query: 471 GEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
G Y APE L A P+ DV+S GV+L ++ P + P FK
Sbjct: 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAI----GSARGLAWLHHNCNPRIIHRN 433
+V Y++ TL D ++H + P+ + AI + + L + H N IIHR+
Sbjct: 93 IVMEYVDGVTLRD--------IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRD 141
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS-TFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I++ K+ DFG+AR + D+ S T G Y++PE R +
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 493 GDVYSFGVVLLELITGERP 511
DVYS G VL E++TGE P
Sbjct: 200 SDVYSLGCVLYEVLTGEPP 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAI----GSARGLAWLHHNCNPRIIHRN 433
+V Y++ TL D ++H + P+ + AI + + L + H N IIHR+
Sbjct: 93 IVMEYVDGVTLRD--------IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRD 141
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE-FGDLGYVAPEYPRTLVATPK 492
+ IL+ K+ DFG+AR + D+ S G Y++PE R +
Sbjct: 142 VKPANILISATNAVKVVDFGIARAI--ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 493 GDVYSFGVVLLELITGERP 511
DVYS G VL E++TGE P
Sbjct: 200 SDVYSLGCVLYEVLTGEPP 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI+ L +RH +++ L +K E ++V Y N L+D + + + M R
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI--VQRDKMSEQEARRFFQ 120
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
I SA + + H + +I+HR++ + +LLD K++DFGL+ +M F+
Sbjct: 121 QIISA--VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-----GNFLK 170
Query: 471 GEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
G Y APE L A P+ DV+S GV+L ++ P + P FK
Sbjct: 171 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 223
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI+ L +RH +++ L +K E ++V Y N L+D + + + M R
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI--VQRDKMSEQEARRFFQ 114
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
I SA + + H + +I+HR++ + +LLD K++DFGL+ +M F+
Sbjct: 115 QIISA--VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-----GNFLK 164
Query: 471 GEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
G Y APE L A P+ DV+S GV+L ++ P + P FK
Sbjct: 165 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 217
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM------DWPLRLR 409
++V LLG + L++ + G L L E+ + ++
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D +
Sbjct: 134 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 186
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 233
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI + H N+V G + L Y G L+D++ P + M P R
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQR 108
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
G+ +LH I HR+I + +LLD K+SDFGLA + + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLL 163
Query: 470 NGEFGDLGYVAPEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
N G L YVAPE R A P DV+S G+VL ++ GE P
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI + H N+V G + L Y G L+D++ P + M P R
Sbjct: 54 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQR 109
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
G+ +LH I HR+I + +LLD K+SDFGLA + + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLL 164
Query: 470 NGEFGDLGYVAPEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
N G L YVAPE R A P DV+S G+VL ++ GE P
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI+ L +RH +++ L +K E ++V Y N L+D + + + M R
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI--VQRDKMSEQEARRFFQ 110
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
I SA + + H + +I+HR++ + +LLD K++DFGL+ +M F+
Sbjct: 111 QIISA--VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-----GNFLK 160
Query: 471 GEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
G Y APE L A P+ DV+S GV+L ++ P + P FK
Sbjct: 161 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI + H N+V G + L Y G L+D++ P + M P R
Sbjct: 54 KEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQR 109
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
G+ +LH I HR+I + +LLD K+SDFGLA + + +
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLL 164
Query: 470 NGEFGDLGYVAPEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
N G L YVAPE R A P DV+S G+VL ++ GE P
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 207
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEK--EFLSEINTLGSVRHRNLVPLLGFCV 371
+G G G Y A + ++ D++ E+ +++ EI+ L S H N+V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL-RLRIAIGSARGLAWLHHNCNPRII 430
+ ++ + G + + ++ ++ PL +I + + L L++ + +II
Sbjct: 105 YENNLWILIEFCAGGAV-------DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 431 HRNISSKCIL--LDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP--RT 486
HR++ + IL LDGD KL+DFG++ +F+ + ++APE T
Sbjct: 158 HRDLKAGNILFTLDGDI--KLADFGVSAKNTRTIQRRDSFIGTPY----WMAPEVVMCET 211
Query: 487 LVATP---KGDVYSFGVVLLELITGERPTHLTN 516
P K DV+S G+ L+E+ E P H N
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM------DWPLRLR 409
++V LLG + L++ + G L L E+ + ++
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D +
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 189
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 236
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYV 174
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 175 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
EFL+E + + ++V LLG + L+V + +G L L E + P
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PG 124
Query: 407 R--------LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
R +++A A G+A+L+ + +HRN++++ ++ DF K+ DFG+ R +
Sbjct: 125 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 181
Query: 459 NPVDTHLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D + G G L ++APE + V T D++SFGVVL E+ + E+P
Sbjct: 182 YETD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 233
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
EFL+E + + ++V LLG + L+V + +G L L E + P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PG 123
Query: 407 R--------LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
R +++A A G+A+L+ + +HRN++++ ++ DF K+ DFG+ R +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 459 NPVDTHLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D + G G L ++APE + V T D++SFGVVL E+ + E+P
Sbjct: 181 YETD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM------DWPLRLR 409
++V LLG + L++ + G L L E+ + ++
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D +
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 188
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 235
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
EI + H N+V G + L Y G L+D++ P + M P R
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQR 108
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
G+ +LH I HR+I + +LLD K+SDFGLA + + +
Sbjct: 109 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLL 163
Query: 470 NGEFGDLGYVAPEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
N G L YVAPE R A P DV+S G+VL ++ GE P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL--------R 407
++V LLG + L++ + G L L E+ + P+
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN--PVLAPPSLSKM 133
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
+++A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----Y 186
Query: 468 FVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
+ G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 235
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM------DWPLRLR 409
++V LLG + L++ + G L L E+ + ++
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D +
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 182
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAI----GSARGLAWLHHNCNPRIIHRN 433
+V Y++ TL D ++H + P+ + AI + + L + H N IIHR+
Sbjct: 110 IVMEYVDGVTLRD--------IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRD 158
Query: 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG 493
+ I++ K+ DFG+AR + + T G Y++PE R +
Sbjct: 159 VKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARS 217
Query: 494 DVYSFGVVLLELITGERP 511
DVYS G VL E++TGE P
Sbjct: 218 DVYSLGCVLYEVLTGEPP 235
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 312 NIIGTGRTGATYIAMLPGGCFIMIKRLE-DSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
+IG GR G Y G I + +E D++ K F E+ RH N+V +G C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 371 VAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRII 430
++ ++ S + TLY + A+ + +D +IA +G+ +LH I+
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAKG---IL 152
Query: 431 HRNISSKCILLDGDFEPKLSDFGLARLMNPVDT-HLSTFVNGEFGDLGYVAPEYPRTLVA 489
H+++ SK + D + ++DFGL + + + + G L ++APE R L
Sbjct: 153 HKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 490 ---------TPKGDVYSFGVVLLELITGERP 511
+ DV++ G + EL E P
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEK--EFLSEINTLGSVRHRNLVPLLGFCV 371
+G G G Y A + ++ D++ E+ +++ EI+ L S H N+V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL-RLRIAIGSARGLAWLHHNCNPRII 430
+ ++ + G + + ++ ++ PL +I + + L L++ + +II
Sbjct: 105 YENNLWILIEFCAGGAV-------DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 431 HRNISSKCIL--LDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP--RT 486
HR++ + IL LDGD KL+DFG++ +F+ + ++APE T
Sbjct: 158 HRDLKAGNILFTLDGDI--KLADFGVSAKNTRXIQRRDSFIGTPY----WMAPEVVMCET 211
Query: 487 LVATP---KGDVYSFGVVLLELITGERPTHLTN 516
P K DV+S G+ L+E+ E P H N
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL--------R 407
++V LLG + L++ + G L L E+ + P+
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN--PVLAPPSLSKM 140
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
+++A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----Y 193
Query: 468 FVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
+ G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYV 174
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 175 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYV 174
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 175 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYV 174
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 175 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 207
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM------DWPLRLR 409
++V LLG + L++ + G L L E+ + ++
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D +
Sbjct: 165 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 217
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 294 EKMRLSDLMKATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLS 350
+K ++ +L + F K + +G G G + ++ P G + K LE + +
Sbjct: 58 QKQKVGEL--KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 115
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
E+ L +V G + E + +++ G+L L A + + ++
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 171
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
+I +GL +L +I+HR++ IL++ E KL DFG++ + +D+ ++FV
Sbjct: 172 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV- 226
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
G Y++PE + + + D++S G+ L+E+ G P +A E
Sbjct: 227 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYD---KLHPAEHEVMHMDWP---LRLR 409
++V LLG + L++ + G L L PA + P ++
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D +
Sbjct: 133 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 185
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 232
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM------DWPLRLR 409
++V LLG + L++ + G L L E+ + ++
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR---- 189
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 236
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 23/186 (12%)
Query: 334 MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA--KKERLLVYSYLENGTLYDK 391
++K + S ++F E L H N++P+LG C + L+ + G+LY+
Sbjct: 40 VLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNV 99
Query: 392 LHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSD 451
LH + V +D ++ A+ ARG A+L H P I ++S+ + +D D ++S
Sbjct: 100 LHEGTNFV--VDQSQAVKFALDXARGXAFL-HTLEPLIPRHALNSRSVXIDEDXTARISX 156
Query: 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK------GDVYSFGVVLLEL 505
D S G +VAPE L P+ D +SF V+L EL
Sbjct: 157 ---------ADVKFSFQSPGRXYAPAWVAPE---ALQKKPEDTNRRSADXWSFAVLLWEL 204
Query: 506 ITGERP 511
+T E P
Sbjct: 205 VTREVP 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 314 IGTGRTGATYIAM---LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
+G G G +A+ + I ++ + + EI + H N+V G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 371 VAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRII 430
+ L Y G L+D++ P + M P R G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 431 HRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEY--PRTLV 488
HR+I + +LLD K+SDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 489 ATPKGDVYSFGVVLLELITGERP 511
A P DV+S G+VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYV 173
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 174 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYV 174
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 175 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYV 174
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 175 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V G + L Y G L+D++ P + M P R G+
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVV 117
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
+LH I HR+I + +LLD K+SDFGLA + + +N G L YV
Sbjct: 118 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYV 172
Query: 480 APEY--PRTLVATPKGDVYSFGVVLLELITGERP 511
APE R A P DV+S G+VL ++ GE P
Sbjct: 173 APELLKRREFHAEPV-DVWSCGIVLTAMLAGELP 205
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 27/210 (12%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373
IG GR G ++ G + +K ++ + +EI +RH N+ LGF A
Sbjct: 45 IGKGRYGEVWMGKWRGE-KVAVKVFFTTEEASWFRETEIYQTVLMRHENI---LGFIAAD 100
Query: 374 -------KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC- 425
+ L+ Y ENG+LYD L + M L++A S GL LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIF 155
Query: 426 ----NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
P I HR++ SK IL+ + ++D GLA + N G Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 482 EY------PRTLVATPKGDVYSFGVVLLEL 505
E + D+YSFG++L E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 294 EKMRLSDLMKATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLS 350
+K ++ +L + F K + +G G G + ++ P G + K LE + +
Sbjct: 23 QKQKVGEL--KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 80
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
E+ L +V G + E + +++ G+L L A + + ++
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 136
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
+I +GL +L +I+HR++ IL++ E KL DFG++ + +D+ ++FV
Sbjct: 137 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV- 191
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
G Y++PE + + + D++S G+ L+E+ G P +A E
Sbjct: 192 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYD---KLHPAEHEVMHMDWP---LRLR 409
++V LLG + L++ + G L L PA + P ++
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D +
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 195
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM------DWPLRLR 409
++V LLG + L++ + G L L E+ + ++
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ ++ DF K+ DFG+ R + D
Sbjct: 128 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR---- 180
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 227
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENGTLYDKLHPAEHEVMHMDWPLR 407
EI L ++ H N+V G C L+ +L +G+L + L ++++ + +
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI---NLKQQ 128
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
L+ A+ +G+ +L + +HR+++++ +L++ + + K+ DFGL + + D T
Sbjct: 129 LKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE-TDKEXXT 184
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+ + + APE DV+SFGV L EL+T
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENGTLYDKLHPAEHEVMHMDWPLR 407
EI L ++ H N+V G C L+ +L +G+L + L ++++ + +
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI---NLKQQ 116
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
L+ A+ +G+ +L + +HR+++++ +L++ + + K+ DFGL + + D T
Sbjct: 117 LKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE-TDKEXXT 172
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+ + + APE DV+SFGV L EL+T
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 314 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEK--EFLSEINTLGSVRHRNLVPLLGFCV 371
+G G G Y A + ++ D++ E+ +++ EI+ L S H N+V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL-RLRIAIGSARGLAWLHHNCNPRII 430
+ ++ + G + + ++ ++ PL +I + + L L++ + +II
Sbjct: 105 YENNLWILIEFCAGGAV-------DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 431 HRNISSKCIL--LDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP--RT 486
HR++ + IL LDGD KL+DFG++ F+ + ++APE T
Sbjct: 158 HRDLKAGNILFTLDGDI--KLADFGVSAKNTRXIQRRDXFIGTPY----WMAPEVVMCET 211
Query: 487 LVATP---KGDVYSFGVVLLELITGERPTHLTN 516
P K DV+S G+ L+E+ E P H N
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 306 NSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLSEINTLGSVRHRN 362
+ F K + +G G G + ++ P G + K LE + + E+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+V G + E + +++ G+L L A + + +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 121
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+I+HR++ IL++ E KL DFG++ + +D+ ++FV G Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
+ + + D++S G+ L+E+ G P +A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH 360
++ + F + ++G G G A + IK++ ++ LSE+ L S+ H
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 361 RNLVPLLGF------------CVAKKERLLV-YSYLENGTLYDKLHPAEHEVMHMDWPLR 407
+ +V V KK L + Y ENGTLYD +H +E+ D R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH-SENLNQQRDEYWR 120
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN------PV 461
L I A L+++H IIHR++ I +D K+ DFGLA+ ++ +
Sbjct: 121 LFRQILEA--LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 462 DTH----LSTFVNGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELI 506
D+ S + G YVA E T K D+YS G++ E+I
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 306 NSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLSEINTLGSVRHRN 362
+ F K + +G G G + ++ P G + K LE + + E+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+V G + E + +++ G+L L A + + +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 121
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+I+HR++ IL++ E KL DFG++ + +D+ ++FV G Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
+ + + D++S G+ L+E+ G P +A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 306 NSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLSEINTLGSVRHRN 362
+ F K + +G G G + ++ P G + K LE + + E+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+V G + E + +++ G+L L A + + +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 121
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+I+HR++ IL++ E KL DFG++ + +D+ ++FV G Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
+ + + D++S G+ L+E+ G P +A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 110
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 111 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 156
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 157 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE---KEFLSEINTLGSVR 359
+ +F K IG G G Y A G + +K++ +E + EI+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 306 NSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLSEINTLGSVRHRN 362
+ F K + +G G G + ++ P G + K LE + + E+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+V G + E + +++ G+L L A + + +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 121
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+I+HR++ IL++ E KL DFG++ + +D+ ++FV G Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
+ + + D++S G+ L+E+ G P +A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE---KEFLSEINTLGSVR 359
+ +F K IG G G Y A G + +K++ +E + EI+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L L D + + + + PL +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASA--LTGIPLPLIKSYLFQLLQGLA 117
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 172
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 173 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 172 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 170
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 306 NSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLSEINTLGSVRHRN 362
+ F K + +G G G + ++ P G + K LE + + E+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+V G + E + +++ G+L L A + + +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 121
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+I+HR++ IL++ E KL DFG++ + +D+ ++FV G Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
+ + + D++S G+ L+E+ G P +A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 112
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 113 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 159 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 117 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 163 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 122
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 123 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 169 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 24/227 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLED--SQHSEKEFLSEINTL 355
A + + +G G G Y + G + IK + + S EFL+E + +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM------DWPLRLR 409
++V LLG + L++ + G L L E+ + ++
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+A A G+A+L+ N + +HR+++++ + DF K+ DFG+ R + D +
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY----YR 182
Query: 470 NGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513
G G L +++PE + V T DV+SFGVVL E+ T E+P
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 229
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
EFL+E + + ++V LLG + L+V + +G L L E + P
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PG 122
Query: 407 R--------LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
R +++A A G+A+L+ + +HR+++++ ++ DF K+ DFG+ R +
Sbjct: 123 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 179
Query: 459 NPVDTHLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D + G G L ++APE + V T D++SFGVVL E+ + E+P
Sbjct: 180 YETD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 231
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
EFL+E + + ++V LLG + L+V + +G L L E + P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PG 123
Query: 407 R--------LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
R +++A A G+A+L+ + +HR+++++ ++ DF K+ DFG+ R +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 459 NPVDTHLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D + G G L ++APE + V T D++SFGVVL E+ + E+P
Sbjct: 181 YETD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 171
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 172 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGS 357
+ + +F K IG G G Y A L G + K RL+ +++ + EI+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 358 VRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARG 417
+ H N+V LL + + LV+ +L + L D + + + + PL +G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA--LTGIPLPLIKSYLFQLLQG 118
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDL 476
LA+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 170
Query: 477 GYVAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
Y APE Y T V D++S G + E++T
Sbjct: 171 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 133 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 178
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 179 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 133 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 178
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 179 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGS 357
+ + +F K IG G G Y A L G + K RL+ +++ + EI+ L
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 358 VRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARG 417
+ H N+V LL + + LV+ +L + L D + + + + PL +G
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA--LTGIPLPLIKSYLFQLLQG 117
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDL 476
LA+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L
Sbjct: 118 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 169
Query: 477 GYVAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
Y APE Y T V D++S G + E++T
Sbjct: 170 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGS 357
+ + +F K IG G G Y A L G + K RL+ +++ + EI+ L
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 358 VRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARG 417
+ H N+V LL + + LV+ +L K + + PL +G
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDL 476
LA+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 171
Query: 477 GYVAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
Y APE Y T V D++S G + E++T
Sbjct: 172 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGS 357
+ + +F K IG G G Y A L G + K RL+ +++ + EI+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 358 VRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARG 417
+ H N+V LL + + LV+ +L K + + PL +G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDL 476
LA+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 170
Query: 477 GYVAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
Y APE Y T V D++S G + E++T
Sbjct: 171 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIA--MLPGGCFIMIKRLEDSQHSEKEFLSEIN 353
M L +A + IG G G + A + GG F+ +KR+ E LS I
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 354 TLGSVRHR------NLVPLLGFC-VAKKER----LLVYSYLENG--TLYDKL-HPAEHEV 399
+ +RH N+V L C V++ +R LV+ +++ T DK+ P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
D +L RGL +LH + R++HR++ + IL+ + KL+DFGLAR+ +
Sbjct: 121 TIKDMMFQL------LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLEL 505
S V L Y APE ++ ATP D++S G + E+
Sbjct: 172 FQMALTSVVVT-----LWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 350 SEINTLGSVRHRNLVPLLGFC--VAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLR 407
EI+ L ++ H +++ G C LV Y+ G+L D L H +
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSI---GLAQL 136
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
L A G+A+LH IHR+++++ +LLD D K+ DFGLA+ +
Sbjct: 137 LLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV 193
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+G+ + + APE + DV+SFGV L EL+T
Sbjct: 194 REDGD-SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +RL S+ S +E E+N L +RH N++ L K +
Sbjct: 36 TGKEYAAK-----FIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 90
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + D + I G+ +LH + RI H ++
Sbjct: 91 VLILELVSGGELFDFL--AEKESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFDLKP 143
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P KL DFG+A + + + F EF VAPE +
Sbjct: 144 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 198
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 199 ADMWSIGVITYILLSGASP 217
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 170
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 171 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 171
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 172 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K A + + PL +GLA+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWYRA 172
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 173 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 172
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 173 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIA--MLPGGCFIMIKRLEDSQHSEKEFLSEIN 353
M L +A + IG G G + A + GG F+ +KR+ E LS I
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 354 TLGSVRHR------NLVPLLGFC-VAKKER----LLVYSYLENG--TLYDKL-HPAEHEV 399
+ +RH N+V L C V++ +R LV+ +++ T DK+ P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
D +L RGL +LH + R++HR++ + IL+ + KL+DFGLAR+ +
Sbjct: 121 TIKDMMFQL------LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLEL 505
S V L Y APE ++ ATP D++S G + E+
Sbjct: 172 FQMALTSVVVT-----LWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K A + + PL +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWYRA 170
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +RL S+ S +E E+N L +RH N++ L K +
Sbjct: 29 TGKEYAAK-----FIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + D + I G+ +LH + RI H ++
Sbjct: 84 VLILELVSGGELFDFL--AEKESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFDLKP 136
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P KL DFG+A + + + F EF VAPE +
Sbjct: 137 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 191
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 192 ADMWSIGVITYILLSGASP 210
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 130
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 131 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 176
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 177 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K A + + PL +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDAS-ALTGIPLPLIKSYLFQLLQGLA 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 170
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 171 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 172 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 170
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 171
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 172 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHR 361
+F K IG G G Y A G + +K++ +E + EI+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWYRA 170
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L K + + PL +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWY 170
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 171 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +RL S+ S +E E+N L +RH N++ L K +
Sbjct: 50 TGKEYAAK-----FIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 104
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + D + I G+ +LH + RI H ++
Sbjct: 105 VLILELVSGGELFDFL--AEKESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFDLKP 157
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P KL DFG+A + + + F EF VAPE +
Sbjct: 158 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 212
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 213 ADMWSIGVITYILLSGASP 231
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 178
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 179 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 206
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIA--MLPGGCFIMIKRLEDSQHSEKEFLSEIN 353
M L +A + IG G G + A + GG F+ +KR+ E LS I
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 354 TLGSVRHR------NLVPLLGFC-VAKKER----LLVYSYLENG--TLYDKL-HPAEHEV 399
+ +RH N+V L C V++ +R LV+ +++ T DK+ P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
D +L RGL +LH + R++HR++ + IL+ + KL+DFGLAR+ +
Sbjct: 121 TIKDMMFQL------LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLEL 505
S V L Y APE ++ ATP D++S G + E+
Sbjct: 172 FQMALTSVVVT-----LWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
EFL+E + + ++V LLG + L+V + +G L L E + P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PG 123
Query: 407 R--------LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
R +++A A G+A+L+ + +HR+++++ ++ DF K+ DFG+ R +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 459 NPVDTHLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D G G L ++APE + V T D++SFGVVL E+ + E+P
Sbjct: 181 XETDXXR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
EFL+E + + ++V LLG + L+V + +G L L E + P
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PG 120
Query: 407 R--------LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
R +++A A G+A+L+ + +HR+++++ ++ DF K+ DFG+ R +
Sbjct: 121 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 459 NPVDTHLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D G G L ++APE + V T D++SFGVVL E+ + E+P
Sbjct: 178 XETDXXR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 229
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHR 361
+F K IG G G Y A G + +K++ +E + EI+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 170
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 101/221 (45%), Gaps = 17/221 (7%)
Query: 294 EKMRLSDLMKATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLS 350
+K ++ +L + F K + +G G G + ++ P G + K LE + +
Sbjct: 15 QKQKVGEL--KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 72
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
E+ L +V G + E + +++ G+L L A + + ++
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 128
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
+I +GL +L +I+HR++ IL++ E KL DFG++ + +D+ ++FV
Sbjct: 129 SIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV- 183
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G Y++PE + + + D++S G+ L+E+ G P
Sbjct: 184 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 172 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHR 361
+F K IG G G Y A G + +K++ +E + EI+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K A + + PL +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 172 PEILLGXKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 175
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 176 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 203
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
EFL+E + + ++V LLG + L+V + +G L L E + P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PG 123
Query: 407 R--------LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
R +++A A G+A+L+ + +HR+++++ ++ DF K+ DFG+ R +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 459 NPVDTHLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D G G L ++APE + V T D++SFGVVL E+ + E+P
Sbjct: 181 XETDXXR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 474
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 475 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 521 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 311 NNIIGTGRTGATY------IAMLPGGCFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNL 363
+ +IG G G Y A C I + R+ + Q E FL E + + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA-FLREGLLMRGLNHPNV 84
Query: 364 VPLLGFCVAKKERL--LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
+ L+G + E L ++ Y+ +G L + + D + + ARG+ +L
Sbjct: 85 LALIGIMLPP-EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYL 140
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYV 479
+ +HR+++++ +LD F K++DFGLAR + +D + L +
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRHARLPVKWT 195
Query: 480 APEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
A E +T T K DV+SFGV+L EL+T P +
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGF 369
IG G +A + G + +K ++ +Q S ++ E+ + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 370 CVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR- 428
+K LV Y G ++D L V H + + A R + C+ +
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYL------VAH--GRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTL 487
I+HR++ ++ +LLD D K++DFG + L F G Y APE +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDAFC----GAPPYAAPELFQGKK 188
Query: 488 VATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
P+ DV+S GV+L L++G P N E
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 46/245 (18%)
Query: 299 SDLMKATNSFSKNN---IIGTGRTGATYIAM-LPGGCFIMIKRL--EDSQHSEKEFLSEI 352
SDL++ + +N ++G G G Y L I IK + DS++S+ EI
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEI 70
Query: 353 NTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG--TLYDKLHPAEH--EVMHMDW-PLR 407
++H+N+V LG S+ ENG ++ + P ++ W PL+
Sbjct: 71 ALHKHLKHKNIVQYLG------------SFSENGFIKIFMEQVPGGSLSALLRSKWGPLK 118
Query: 408 ---LRIAIGSAR---GLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLARLMNP 460
I + + GL +LH N +I+HR+I +L++ K+SDFG ++ +
Sbjct: 119 DNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLELITGERPTHLT 515
++ TF G L Y+APE + P+G D++S G ++E+ TG+ P +
Sbjct: 176 INPCTETFT----GTLQYMAPE---IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228
Query: 516 NAPES 520
P++
Sbjct: 229 GEPQA 233
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVRHR 361
+F K IG G G Y A L G + K RL+ +++ + EI+ L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GLA+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 178
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 179 PEILLGXKYYSTAV-----DIWSLGCIFAEMVT 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 475
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 476 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 521
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 522 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
E + L V H +V L + + L+ +L G L+ +L EVM + ++ +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 136
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A A GL LH + II+R++ + ILLD + KL+DFGL++ + +F
Sbjct: 137 A-ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC- 191
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
G + Y+APE + D +S+GV++ E++TG P + E+
Sbjct: 192 ---GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKET 238
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 30/243 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVR--- 359
AT+ + IG G G Y A P G F+ +K + E +S + + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 360 ---HRNLVPLLGFCVAKK-----ERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPLRLR 409
H N+V L+ C + + LV+ +++ T DK P + +R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+ RGL +LH NC I+HR++ + IL+ KL+DFGLAR+ + V
Sbjct: 122 L-----RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 470 NGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528
L Y APE ++ ATP D++S G + E+ +P N+ G + +
Sbjct: 174 T-----LWYRAPEVLLQSTYATPV-DMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDL 226
Query: 529 ITL 531
I L
Sbjct: 227 IGL 229
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +++ K + + PL +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 172
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 173 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 31/230 (13%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH 360
++ + F + ++G G G A + IK++ ++ LSE+ L S+ H
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNH 61
Query: 361 RNLVPLLGF------------CVAKKERLLVY-SYLENGTLYDKLHPAEHEVMHMDWPLR 407
+ +V V KK L + Y EN TLYD +H +E+ D R
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH-SENLNQQRDEYWR 120
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN------PV 461
L I A L+++H IIHRN+ I +D K+ DFGLA+ ++ +
Sbjct: 121 LFRQILEA--LSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 462 DTH----LSTFVNGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELI 506
D+ S + G YVA E T K D YS G++ E I
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EV 399
E L+E N + + + +V ++G C A+ +LV E G L L H E+
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 400 MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+H + G+ +L + +HR+++++ +LL K+SDFGL++ +
Sbjct: 117 VHQ-----------VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ +G++ + + APE + K DV+SFGV++ E + G++P
Sbjct: 163 ADENXYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
E + L V H +V L + + L+ +L G L+ +L EVM + ++ +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 133
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A LA L H + II+R++ + ILLD + KL+DFGL++ + +F
Sbjct: 134 A---ELALA-LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC- 188
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
G + Y+APE T D +SFGV++ E++TG P + E+
Sbjct: 189 ---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 235
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
E + L V H +V L + + L+ +L G L+ +L EVM + ++ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 132
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A LA L H + II+R++ + ILLD + KL+DFGL++ + +F
Sbjct: 133 A---ELALA-LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC- 187
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
G + Y+APE T D +SFGV++ E++TG P + E+
Sbjct: 188 ---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGS 357
+ + +F K IG G G Y A L G + K RL+ +++ + EI+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 358 VRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARG 417
+ H N+V LL + + LV+ +L ++ K + + PL +G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDL 476
LA+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L
Sbjct: 119 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 170
Query: 477 GYVAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
Y APE Y T V D++S G + E++T
Sbjct: 171 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
E + L V H +V L + + L+ +L G L+ +L EVM + ++ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 132
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
A LA L H + II+R++ + ILLD + KL+DFGL++ + +F
Sbjct: 133 A---ELALA-LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC- 187
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
G + Y+APE T D +SFGV++ E++TG P + E+
Sbjct: 188 ---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIK-RLE-DSQHSEKEFLSEINTLGSVR 359
+ +F K IG G G Y A L G + K RL+ +++ + EI+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+V LL + + LV+ +L ++ K + + PL +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 170
Query: 479 VAPE------YPRTLVATPKGDVYSFGVVLLELIT 507
APE Y T V D++S G + E++T
Sbjct: 171 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 29/218 (13%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPG-----GCFIMIKRLEDSQHSEKEFLSEINTLGSVRH 360
N+F + ++G G G + C + K+ + E L+E L V
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 361 RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW 420
R +V L K LV + + G L K H + HM + AR + +
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDL--KFH-----IYHMG-----QAGFPEARAVFY 291
Query: 421 LHHNC-------NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
C RI++R++ + ILLD ++SD GLA V + G
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-----VHVPEGQTIKGRV 346
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G +GY+APE + T D ++ G +L E+I G+ P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 29/218 (13%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPG-----GCFIMIKRLEDSQHSEKEFLSEINTLGSVRH 360
N+F + ++G G G + C + K+ + E L+E L V
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 361 RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW 420
R +V L K LV + + G L K H + HM + AR + +
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDL--KFH-----IYHMG-----QAGFPEARAVFY 291
Query: 421 LHHNC-------NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
C RI++R++ + ILLD ++SD GLA V + G
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-----VHVPEGQTIKGRV 346
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G +GY+APE + T D ++ G +L E+I G+ P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 30/243 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVR--- 359
AT+ + IG G G Y A P G F+ +K + E +S + + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 360 ---HRNLVPLLGFCVAKK-----ERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPLRLR 409
H N+V L+ C + + LV+ +++ T DK P + +R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+ RGL +LH NC I+HR++ + IL+ KL+DFGLAR+ + +
Sbjct: 122 L-----RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMAL 168
Query: 470 NGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528
+ L Y APE ++ ATP D++S G + E+ +P N+ G + +
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPV-DMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDL 226
Query: 529 ITL 531
I L
Sbjct: 227 IGL 229
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
EFL+E + + ++V LLG + L+V + +G L L E + P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PG 123
Query: 407 R--------LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
R +++A A G+A+L+ + +HR+++++ ++ DF K+ DFG+ R +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 459 NPVDTHLSTFVNGEFGDL--GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ + G G L ++APE + V T D++SFGVVL E+ + E+P
Sbjct: 181 ----YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 30/243 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVR--- 359
AT+ + IG G G Y A P G F+ +K + E +S + + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 360 ---HRNLVPLLGFCVAKK-----ERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPLRLR 409
H N+V L+ C + + LV+ +++ T DK P + +R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
+ RGL +LH NC I+HR++ + IL+ KL+DFGLAR+ + L+ V
Sbjct: 122 L-----RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALAPVV 172
Query: 470 NGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528
L Y APE ++ ATP D++S G + E+ +P N+ G + +
Sbjct: 173 V----TLWYRAPEVLLQSTYATPV-DMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDL 226
Query: 529 ITL 531
I L
Sbjct: 227 IGL 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHR 361
+F K IG G G Y A G + +K++ +E + EI+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ +L K + + PL +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 172 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHR 361
+F K IG G G Y A G + +K++ +E + EI+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N+V LL + + LV+ ++ K + + PL +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDL---KTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGYVA 480
H + R++HR++ + +L++ + KL+DFGLAR PV T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 170
Query: 481 PE------YPRTLVATPKGDVYSFGVVLLELIT 507
PE Y T V D++S G + E++T
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 312 NIIGT-GRTGATYIAMLPGGCFIMIKRLEDSQHSEK--EFLSEINTLGSVRHRNLVPLLG 368
IIG G G Y A + ++ D++ E+ +++ EI+ L S H N+V LL
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 369 FCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL-RLRIAIGSARGLAWLHHNCNP 427
+ ++ + G + + ++ ++ PL +I + + L L++ +
Sbjct: 75 AFYYENNLWILIEFCAGGAV-------DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 428 RIIHRNISSKCIL--LDGDFEPKLSDFGL-ARLMNPVDTHLSTFVNGEFGDLGYVAPEYP 484
+IIHR++ + IL LDGD KL+DFG+ A+ +F+ + ++APE
Sbjct: 128 KIIHRDLKAGNILFTLDGDI--KLADFGVSAKNTRTXIQRRDSFIGTPY----WMAPEVV 181
Query: 485 --RTLVATP---KGDVYSFGVVLLELITGERPTHLTN 516
T P K DV+S G+ L+E+ E P H N
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 21/195 (10%)
Query: 324 IAMLPGGCFIMIKRLEDSQHSEK---EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380
I ++ F + +D+++ EK E +EI+ L S+ H N++ L KK LV
Sbjct: 66 IKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVT 125
Query: 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH-HNCNPRIIHRNISSKCI 439
+ E G L++++ H+ D ++ + G+ +LH HN I+HR+I + I
Sbjct: 126 EFYEGGELFEQI-INRHKFDECDAANIMKQILS---GICYLHKHN----IVHRDIKPENI 177
Query: 440 LLDGD---FEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVY 496
LL+ K+ DFGL+ + D L G Y+APE + K DV+
Sbjct: 178 LLENKNSLLNIKIVDFGLSSFFSK-DYKLRD----RLGTAYYIAPEVLKKKY-NEKCDVW 231
Query: 497 SFGVVLLELITGERP 511
S GV++ L+ G P
Sbjct: 232 SCGVIMYILLCGYPP 246
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQH-SEKE-FLSEINTLGS 357
N S +G G G A G + +K L+ S H +E+E +SE+ L
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 358 V-RHRNLVPLLGFCVAKKERLLVYSYLENGTLYD------------KLHPA--EHEVMHM 402
+ H N+V LLG C L++ Y G L + K PA E + + +
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 403 DWPLRLRIAIGSARGLAWL-HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461
D L + A+G+A+L NC IHR+++++ ILL K+ DFGLAR +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN- 213
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D++ N + ++APE V T + DV+S+G+ L EL + G P
Sbjct: 214 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQH-SEKE-FLSEINTLGS 357
N S +G G G A G + +K L+ S H +E+E +SE+ L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 358 V-RHRNLVPLLGFCVAKKERLLVYSYLENGTLYD------------KLHPA--EHEVMHM 402
+ H N+V LLG C L++ Y G L + K PA E + + +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 403 DWPLRLRIAIGSARGLAWL-HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461
D L + A+G+A+L NC IHR+++++ ILL K+ DFGLAR +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKN- 220
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D++ N + ++APE V T + DV+S+G+ L EL + G P
Sbjct: 221 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 31/230 (13%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH 360
++ + F + ++G G G A + IK++ ++ LSE+ L S+ H
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 361 RNLVPLLGF------------CVAKKERLLV-YSYLENGTLYDKLHPAEHEVMHMDWPLR 407
+ +V V KK L + Y EN TLYD +H +E+ D R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH-SENLNQQRDEYWR 120
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN------PV 461
L I A L+++H IIHR++ I +D K+ DFGLA+ ++ +
Sbjct: 121 LFRQILEA--LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 462 DTH----LSTFVNGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELI 506
D+ S + G YVA E T K D+YS G++ E+I
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQH-SEKE-FLSEINTLGS 357
N S +G G G A G + +K L+ S H +E+E +SE+ L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 358 V-RHRNLVPLLGFCVAKKERLLVYSYLENGTLYD------------KLHPA--EHEVMHM 402
+ H N+V LLG C L++ Y G L + K PA E + + +
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 403 DWPLRLRIAIGSARGLAWL-HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461
D L + A+G+A+L NC IHR+++++ ILL K+ DFGLAR +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN- 197
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D++ N + ++APE V T + DV+S+G+ L EL + G P
Sbjct: 198 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQH-SEKE-FLSEINTLGS 357
N S +G G G A G + +K L+ S H +E+E +SE+ L
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 358 V-RHRNLVPLLGFCVAKKERLLVYSYLENGTLYD------------KLHPA--EHEVMHM 402
+ H N+V LLG C L++ Y G L + K PA E + + +
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 403 DWPLRLRIAIGSARGLAWL-HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461
D L + A+G+A+L NC IHR+++++ ILL K+ DFGLAR +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN- 215
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D++ N + ++APE V T + DV+S+G+ L EL + G P
Sbjct: 216 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 306 NSFSKNNIIGTGRTGATY-IAMLPGGCFIMIK--RLEDSQHSEKEFLSEINTLGSVRHRN 362
+ F K + +G G G + ++ P G + K LE + + E+ L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+V G + E + +++ G+L L A + + +++I +GL +L
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 124
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+I+HR++ IL++ E KL DFG++ + +D + FV G Y++PE
Sbjct: 125 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDEMANEFV----GTRSYMSPE 176
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERP 511
+ + + D++S G+ L+E+ G P
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
N RIIHR++ ILLD ++DF +A ++ P +T ++T G Y+APE
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMA----GTKPYMAPE--- 184
Query: 486 TLVATPKGDVYSF-------GVVLLELITGERPTHLTNAPES 520
+ ++ KG YSF GV EL+ G RP H+ ++ S
Sbjct: 185 -MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
+E + E + + + +V L+G C A E L++ + G K + E + +
Sbjct: 55 EEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNV 112
Query: 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465
L + + G+ +L +HR+++++ +LL K+SDFGL++ + D++
Sbjct: 113 AELLHQV--SMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 167
Query: 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPE 519
+ G++ L + APE + + DV+S+GV + E ++ G++P PE
Sbjct: 168 TARSAGKW-PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
+E + E + + + +V L+G C A E L++ + G K + E + +
Sbjct: 381 EEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNV 438
Query: 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465
L + + G+ +L +HRN++++ +LL K+SDFGL++ + D++
Sbjct: 439 AELLHQV--SMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493
Query: 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPE 519
+ G++ L + APE + + DV+S+GV + E ++ G++P PE
Sbjct: 494 TARSAGKW-PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 31/231 (13%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQH-SEKE-FLSEINTLGS 357
N S +G G G A G + +K L+ S H +E+E +SE+ L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 358 V-RHRNLVPLLGFCVAKKERLLVYSYLENGTLYD------------KLHPA--EHEVMHM 402
+ H N+V LLG C L++ Y G L + K PA E + + +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 403 DWPLRLRIAIGSARGLAWL-HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461
D L + A+G+A+L NC IHR+++++ ILL K+ DFGLAR +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN- 220
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D++ N + ++APE V T + DV+S+G+ L EL + G P
Sbjct: 221 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 317 GRTGATYIAMLPG---GCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCV- 371
G G +Y+ ++ G G F +KR L Q +E E + H N++ L+ +C+
Sbjct: 38 GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 372 ---AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
AK E L+ + + GTL++++ + + + L + +G RGL +H
Sbjct: 98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--- 154
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN--------GEFGDLGYVA 480
HR++ ILL + +P L D G MN H+ + + Y A
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 481 PEY---PRTLVATPKGDVYSFGVVLLELITGERP 511
PE V + DV+S G VL ++ GE P
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 30/188 (15%)
Query: 334 MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLH 393
+I++ S S + L E+ L + H N++ L F K+ LV + G L+D
Sbjct: 69 IIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD--- 125
Query: 394 PAEHEVMH------MDWPLRLRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDG--- 443
E++H +D + ++ + G+ +LH HN I+HR++ + +LL+
Sbjct: 126 ----EIIHRMKFNEVDAAVIIKQVLS---GVTYLHKHN----IVHRDLKPENLLLESKEK 174
Query: 444 DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLL 503
D K+ DFGL+ + + G Y+APE R K DV+S GV+L
Sbjct: 175 DALIKIVDFGLSAVFEN-----QKKMKERLGTAYYIAPEVLRKKY-DEKCDVWSIGVILF 228
Query: 504 ELITGERP 511
L+ G P
Sbjct: 229 ILLAGYPP 236
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 109/272 (40%), Gaps = 30/272 (11%)
Query: 314 IGTGRTGATY-IAMLPGGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
+GTG G + + G K + S+KE + EI T+ +RH LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +++Y ++ G L++K+ EH M D + + +GL +H N +H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQV--CKGLCHMHEN---NYVH 278
Query: 432 RNISSKCILLDGDF--EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVA 489
++ + I+ E KL DFGL ++P + T EF APE
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF-----AAPEVAEGKPV 333
Query: 490 TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGN 549
D++S GV+ L++G P N E TL N S D + G
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDE----------TLRNVKSCDWNMDDSAFSGI 383
Query: 550 GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581
DG+ F+R +L P R T+ + +
Sbjct: 384 SEDGK--DFIR---KLLLADPNTRMTIHQALE 410
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 20/212 (9%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSVRH 360
+ F +G G+ G Y+A FIM +K L SQ E + EI +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 361 RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW 420
N++ + + +K L+ + G LY +L +H + A
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADA----- 127
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLGYV 479
LH+ ++IHR+I + +L+ E K++DFG + H + G L Y+
Sbjct: 128 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYL 180
Query: 480 APEYPRTLVATPKGDVYSFGVVLLELITGERP 511
PE K D++ GV+ E + G P
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 20/212 (9%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSVRH 360
+ F +G G+ G Y+A FIM +K L SQ E + EI +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 361 RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW 420
N++ + + +K L+ + G LY +L +H + A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADA----- 126
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLGYV 479
LH+ ++IHR+I + +L+ E K++DFG + H + G L Y+
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYL 179
Query: 480 APEYPRTLVATPKGDVYSFGVVLLELITGERP 511
PE K D++ GV+ E + G P
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 305 TNSFSKNNIIGTGRTGATYI---AMLPGGCFI-MIKRLEDSQHSEKE-FLSEINTLGSVR 359
++ + ++G G G + + C + +I + + Q ++KE L E+ L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N++ L F K LV G L+D++ + +D +R + G+
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 140
Query: 420 WLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNPVDTHL--STFVNGEFG 474
++H N +I+HR++ + +LL+ D ++ DFGL+ TH S + + G
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIG 190
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELITG 508
Y+APE K DV+S GV+L L++G
Sbjct: 191 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 98/227 (43%), Gaps = 33/227 (14%)
Query: 313 IIGTGRTGATYIAMLPGG-CFIMIKRLEDS----QHSEKEFLSEINTL-GSVRHRNLVPL 366
+IG G G +A F +K L+ + EK +SE N L +V+H LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 367 -LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIA-IGSARGLAWLHHN 424
F A K V Y+ G L+ L + E ++ R A I SA G H+
Sbjct: 105 HFSFQTADK-LYFVLDYINGGELFYHL---QRERCFLEPRARFYAAEIASALGYL---HS 157
Query: 425 CNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-- 482
N I++R++ + ILLD L+DFGL + ++ STF G Y+APE
Sbjct: 158 LN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC----GTPEYLAPEVL 211
Query: 483 ----YPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
Y RT+ D + G VL E++ G P + N E + L
Sbjct: 212 HKQPYDRTV------DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 94 LKGQFPRGIERCXXXXXXXXXXXXXXXXIPSDISSRLQYVTSLDLSSNSLSGEIPSGLAN 153
L G P I + IP D S+++ + +LD S N+LSG +P +++
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIP-DFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 154 CTFLNVLKLNNNRFTGKIPPQLGLLNRIKT-FSVASNLLTGPV-PSFANVNFTAEDFANN 211
L + + NR +G IP G +++ T +++ N LTG + P+FAN+N D + N
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRN 207
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 157 LNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVN-FTAEDFANNSGLC 215
LN L L NNR G +P L L + + +V+ N L G +P N+ F +ANN LC
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
Query: 216 GKPLNPC 222
G PL C
Sbjct: 306 GSPLPAC 312
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 125 DISSRLQYVTSLDLSSNSLSGE--IPSGLANCTFLNVLKLNN-NRFTGKIPPQLGLLNRI 181
D ++ V +LDLS +L IPS LAN +LN L + N G IPP + L ++
Sbjct: 44 DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL 103
Query: 182 KTFSVASNLLTGPVPSF 198
+ ++G +P F
Sbjct: 104 HYLYITHTNVSGAIPDF 120
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 11/167 (6%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLV-YSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
E + + + H V L FC E+L SY +NG L + ++ D
Sbjct: 87 ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRF 141
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469
L +LH IIHR++ + ILL+ D +++DFG A++++P
Sbjct: 142 YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--A 196
Query: 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
N G YV+PE A D+++ G ++ +L+ G P N
Sbjct: 197 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 109/272 (40%), Gaps = 30/272 (11%)
Query: 314 IGTGRTGATY-IAMLPGGCFIMIKRLEDSQHSEKEFL-SEINTLGSVRHRNLVPLLGFCV 371
+GTG G + + G K + S+KE + EI T+ +RH LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431
E +++Y ++ G L++K+ EH M D + + +GL +H N +H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQV--CKGLCHMHEN---NYVH 172
Query: 432 RNISSKCILLDGDF--EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVA 489
++ + I+ E KL DFGL ++P + T EF APE
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA-----APEVAEGKPV 227
Query: 490 TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGN 549
D++S GV+ L++G P N E TL N S D + G
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDE----------TLRNVKSCDWNMDDSAFSGI 277
Query: 550 GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581
DG+ F+R +L P R T+ + +
Sbjct: 278 SEDGK--DFIR---KLLLADPNTRMTIHQALE 304
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372
+G G G+ Y A+ G + IK++ + +E + EI+ + ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432
+ +V Y G++ D + + + L+ + +GL +LH R IHR
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQ---STLKGLEYLHFM---RKIHR 149
Query: 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+I + ILL+ + KL+DFG+A + + + F ++APE + +
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF----WMAPEVIQEIGYNCV 205
Query: 493 GDVYSFGVVLLELITGERP 511
D++S G+ +E+ G+ P
Sbjct: 206 ADIWSLGITAIEMAEGKPP 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSV---- 358
AT+ + IG G G Y A P G F+ +K + I+T+ V
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 359 -----RHRNLVPLLGFCVAKK-----ERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPL 406
H N+V L+ C + + LV+ +++ T DK P + +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
R + RGL +LH NC I+HR++ + IL+ KL+DFGLAR+ + L+
Sbjct: 127 RQFL-----RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALT 177
Query: 467 TFVNGEFGDLGYVAPEY-PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
V L Y APE ++ ATP D++S G + E+ +P N+ G +
Sbjct: 178 PVVV----TLWYRAPEVLLQSTYATPV-DMWSVGCIFAEMFR-RKPLFCGNSEADQLGKI 231
Query: 526 VEWITL 531
+ I L
Sbjct: 232 FDLIGL 237
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST+ G L ++APE
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 565
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIA-IGSARGLAWLHHNCNPRIIHRNIS 435
LL Y E G L L+ E+ + P+R ++ I SA L +LH N RIIHR++
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA--LRYLHEN---RIIHRDLK 148
Query: 436 SKCILLDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L + K+ D G A+ ++ + + FV G L Y+APE T
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFV----GTLQYLAPELLEQKKYTVT 203
Query: 493 GDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE 527
D +SFG + E ITG RP P + G + E
Sbjct: 204 VDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 238
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIA-IGSARGLAWLHHNCNPRIIHRNIS 435
LL Y E G L L+ E+ + P+R ++ I SA L +LH N RIIHR++
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA--LRYLHEN---RIIHRDLK 149
Query: 436 SKCILLDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L + K+ D G A+ ++ + + FV G L Y+APE T
Sbjct: 150 PENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFV----GTLQYLAPELLEQKKYTVT 204
Query: 493 GDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE 527
D +SFG + E ITG RP P + G + E
Sbjct: 205 VDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 239
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+FL E L H N+V L+G C K+ +V ++ G D L E +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKT 214
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
L++ +A G+ +L C IHR+++++ L+ K+SDFG++R D +
Sbjct: 215 LLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYA 269
Query: 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLE 504
+ + APE + + DV+SFG++L E
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 29/230 (12%)
Query: 305 TNSFSKNNIIGTGRTGATYI---AMLPGGCFI-MIKRLEDSQHSEKE-FLSEINTLGSVR 359
++ + ++G G G + + C + +I + + Q ++KE L E+ L +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N++ L F K LV G L+D++ + +D +R + G+
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 146
Query: 420 WLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNPVDTHL--STFVNGEFG 474
++H N +I+HR++ + +LL+ D ++ DFGL+ TH S + + G
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIG 196
Query: 475 DLGYVAPEYPRTLVAT--PKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
Y+APE L T K DV+S GV+L L++G P + N + K
Sbjct: 197 TAYYIAPE---VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 243
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 43/228 (18%)
Query: 313 IIGTGRTGATYIAM-LPGGCFIMIKRL--EDSQHSEKEFLSEINTLGSVRHRNLVPLLGF 369
++G G G Y L I IK + DS++S+ EI ++H+N+V LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEIALHKHLKHKNIVQYLG- 72
Query: 370 CVAKKERLLVYSYLENG--TLYDKLHPAEH--EVMHMDW-PLR---LRIAIGSAR---GL 418
S+ ENG ++ + P ++ W PL+ I + + GL
Sbjct: 73 -----------SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 419 AWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLG 477
+LH N +I+HR+I +L++ K+SDFG ++ + ++ TF G L
Sbjct: 122 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT----GTLQ 174
Query: 478 YVAPEYPRTLVATPKG-----DVYSFGVVLLELITGERPTHLTNAPES 520
Y+APE + P+G D++S G ++E+ TG+ P + P++
Sbjct: 175 YMAPE---IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA 219
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 305 TNSFSKNNIIGTGRTGATYI---AMLPGGCFI-MIKRLEDSQHSEKE-FLSEINTLGSVR 359
++ + ++G G G + + C + +I + + Q ++KE L E+ L +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N++ L F K LV G L+D++ + +D +R + G+
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 164
Query: 420 WLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNPVDTHL--STFVNGEFG 474
++H N +I+HR++ + +LL+ D ++ DFGL+ TH S + + G
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIG 214
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELITG 508
Y+APE K DV+S GV+L L++G
Sbjct: 215 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 305 TNSFSKNNIIGTGRTGATYI---AMLPGGCFI-MIKRLEDSQHSEKE-FLSEINTLGSVR 359
++ + ++G G G + + C + +I + + Q ++KE L E+ L +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N++ L F K LV G L+D++ + +D +R + G+
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 163
Query: 420 WLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNPVDTHL--STFVNGEFG 474
++H N +I+HR++ + +LL+ D ++ DFGL+ TH S + + G
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIG 213
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELITG 508
Y+APE K DV+S GV+L L++G
Sbjct: 214 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 246
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPL 406
+FL E L H N+V L+G C K+ +V ++ G D L E +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKT 214
Query: 407 RLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466
L++ +A G+ +L C IHR+++++ L+ K+SDFG++R D +
Sbjct: 215 LLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXA 269
Query: 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLE 504
+ + APE + + DV+SFG++L E
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 339 EDSQHSE-KEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV-YSYLENGTLYDKLHPA 395
E + HSE + +SE+ L + H N+V LLG C L+V + + G L L
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
Query: 396 EHEV-----MHMDW---PLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447
+E ++ D+ + + A+G+ +L + + IHR+++++ ILL
Sbjct: 127 RNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVV 183
Query: 448 KLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKGDVYSFGVVLL 503
K+ DFGLAR + ++ GD L ++APE V T + DV+SFGV+L
Sbjct: 184 KIXDFGLARDIYKDPDYVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 504 ELIT-GERPTHLTNAPESFKGSLVE 527
E+ + G P E F L E
Sbjct: 238 EIFSLGASPYPGVKIDEEFXRRLKE 262
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 21/233 (9%)
Query: 295 KMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLP--GGCFI-----MIKRLEDSQHSEKE 347
K +L D++ F+ ++G G G+ A L G F+ M+K + +E
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71
Query: 348 FLSEINTLGSVRHRNLVPLLGFCVAKKER------LLVYSYLENGTLYDKLHPAEHEVMH 401
FL E + H ++ L+G + + + +++ ++++G L+ L +
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 402 MDWPLR--LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
+ PL+ +R + A G+ +L IHR+++++ +L D ++DFGL+R +
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D + + + ++A E + T DV++FGV + E++T G+ P
Sbjct: 189 SGDYYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST+ G L ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 185
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 314 IGTGRTGATYIAMLPGGCFIM-IKRLEDSQHS----EKEFLSEINTLGSVRHRNLVPLLG 368
+G G+ G Y+A FIM +K L SQ E + EI +RH N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 369 FCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
+ +K L+ + G LY +L +H + A LH+ +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADA-----LHYCHERK 134
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLGYVAPEYPRTL 487
+IHR+I + +L+ E K++DFG + H + G L Y+ PE
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 488 VATPKGDVYSFGVVLLELITGERP 511
K D++ GV+ E + G P
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 333 IMIKRL-EDSQHSE-KEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV-YSYLENGTL 388
+ +K L E + HSE + +SE+ L + H N+V LLG C L+V + + G L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 389 YDKLHPAEHEVMHMDWPLRLR-----------IAIGSARGLAWLHHNCNPRIIHRNISSK 437
L +E + P L + A+G+ +L + + IHR+++++
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKG 493
ILL K+ DFGLAR + + GD L ++APE V T +
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRK------GDARLPLKWMAPETIFDRVYTIQS 231
Query: 494 DVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
DV+SFGV+L E+ + G P E F L E
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
GL +LH + I++R++ ILLD D K++DFG+ + D + F G
Sbjct: 131 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC----GTP 183
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521
Y+APE D +SFGV+L E++ G+ P H + E F
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST+ G L ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 185
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ KL DFGL+R M ST+ G L ++APE
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 185
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 75 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 127
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST+ G L ++APE
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 182
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 106 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 158
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST+ G L ++APE
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 213
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
GL +LH + I++R++ ILLD D K++DFG+ + D + F G
Sbjct: 130 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC----GTP 182
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521
Y+APE D +SFGV+L E++ G+ P H + E F
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTA 198
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A+ D+++ G ++ +L+ G P N
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 80 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 132
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST+ G L ++APE
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 187
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ KL DFGL+R M ST+ G L ++APE
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 565
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 21/252 (8%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKE-FLSEINTLGSV 358
++F ++G G G +A + G +K L+ Q + E ++E L
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 359 RHRNLVPLLGFCVAKKERLL-VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARG 417
R+ + L C +RL V ++ G L + + D A
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISA 136
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR--LMNPVDTHLSTFVNGEFGD 475
L +LH + II+R++ +LLD + KL+DFG+ + + N V T +TF G
Sbjct: 137 LMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT--ATFC----GT 187
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535
Y+APE + ++ P D ++ GV+L E++ G P N + F+ L + +
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWL 247
Query: 536 SSLETAIDKSLL 547
T I KS +
Sbjct: 248 HEDATGILKSFM 259
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 81 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 133
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST+ G L ++APE
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 188
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 83 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 135
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST+ G L ++APE
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 190
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 333 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL 392
I+ K L H ++ EI+ S+ H+++V GF +V +L + L
Sbjct: 49 IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-L 107
Query: 393 HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452
H + + LR + G +LH N R+IHR++ + L+ D E K+ DF
Sbjct: 108 HKRRKALTEPEARYYLRQIV---LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 161
Query: 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLELIT 507
GLA + T G Y+APE V + KG DV+S G ++ L+
Sbjct: 162 GLATKVEYDGERKKTLC----GTPNYIAPE-----VLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 508 GERPTHLTNAPESF 521
G+ P + E++
Sbjct: 213 GKPPFETSCLKETY 226
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 333 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL 392
I+ K L H ++ EI+ S+ H+++V GF +V +L + L
Sbjct: 53 IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-L 111
Query: 393 HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452
H + + LR + G +LH N R+IHR++ + L+ D E K+ DF
Sbjct: 112 HKRRKALTEPEARYYLRQIV---LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 165
Query: 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLELIT 507
GLA + T G Y+APE V + KG DV+S G ++ L+
Sbjct: 166 GLATKVEYDGERKKTLC----GTPNYIAPE-----VLSKKGHSFEVDVWSIGCIMYTLLV 216
Query: 508 GERPTHLTNAPESF 521
G+ P + E++
Sbjct: 217 GKPPFETSCLKETY 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 333 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL 392
I+ K L H ++ EI+ S+ H+++V GF +V +L + L
Sbjct: 49 IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-L 107
Query: 393 HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452
H + + LR + G +LH N R+IHR++ + L+ D E K+ DF
Sbjct: 108 HKRRKALTEPEARYYLRQIV---LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 161
Query: 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLELIT 507
GLA + T G Y+APE V + KG DV+S G ++ L+
Sbjct: 162 GLATKVEYDGERKKTLC----GTPNYIAPE-----VLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 508 GERPTHLTNAPESF 521
G+ P + E++
Sbjct: 213 GKPPFETSCLKETY 226
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 333 IMIKRL-EDSQHSE-KEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLV-YSYLENGTL 388
+ +K L E + HSE + +SE+ L + H N+V LLG C L+V + + G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 389 YDKLHPAEHE-VMHMDWPLRLR-----------IAIGSARGLAWLHHNCNPRIIHRNISS 436
L +E V + + P L + A+G+ +L + + IHR++++
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 178
Query: 437 KCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPK 492
+ ILL K+ DFGLAR + ++ GD L ++APE V T +
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPETIFDRVYTIQ 232
Query: 493 GDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
DV+SFGV+L E+ + G P E F L E
Sbjct: 233 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 268
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 26/182 (14%)
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL----HPAEHEVMHMDW 404
L E+ L + H N++ L +V G L+D++ +EH+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---- 124
Query: 405 PLRLRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNP 460
RI G+ ++H HN I+HR++ + ILL+ D + K+ DFGL+
Sbjct: 125 ----RIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
+T + G Y+APE R K DV+S GV+L L++G P + N +
Sbjct: 177 -----NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 521 FK 522
K
Sbjct: 231 LK 232
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 339 EDSQHSE-KEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV-YSYLENGTLYDKLHPA 395
E + HSE + +SE+ L + H N+V LLG C L+V + + G L L
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
Query: 396 EHEV-----MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
+E ++ D+ L L + A+G+ +L + + IHR+++++ ILL
Sbjct: 127 RNEFVPYKDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV 182
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKGDVYSFGVVL 502
K+ DFGLAR + ++ GD L ++APE V T + DV+SFGV+L
Sbjct: 183 VKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 503 LELIT-GERPTHLTNAPESFKGSLVE 527
E+ + G P E F L E
Sbjct: 237 WEIFSLGASPYPGVKIDEEFCRRLKE 262
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 313 IIGTGRTG----ATYIAMLPGGCFI-----MIKRLEDSQHSEKEFLSEINTLGSV-RHRN 362
++G+G G AT + G I M+K DS E +SE+ + + H N
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREA-LMSELKMMTQLGSHEN 110
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHP-----AEHEVMH--------------MD 403
+V LLG C L++ Y G L + L +E E+ + +
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR-LMNPVD 462
+ L A A+G+ +L +HR+++++ +L+ K+ DFGLAR +M+ D
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMS--D 225
Query: 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ N + ++APE + T K DV+S+G++L E+ +
Sbjct: 226 SNYVVRGNARL-PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANAFVGTA 196
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
Query: 292 SVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIA-------MLPGGCFIMIKRLEDSQHS 344
+VE R + + +++GTG +A ++ C I K LE + S
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKC-IAKKALEGKEGS 62
Query: 345 EKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDW 404
+ +EI L ++H N+V L + L+ + G L+D++ E
Sbjct: 63 ME---NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERD 117
Query: 405 PLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCIL---LDGDFEPKLSDFGLARLMNPV 461
RL + A + +LH + I+HR++ + +L LD D + +SDFGL+++ +P
Sbjct: 118 ASRLIFQVLDA--VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP- 171
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521
+ ++ G GYVAPE + D +S GV+ L+ G P + N + F
Sbjct: 172 ----GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
Query: 522 KGSL 525
+ L
Sbjct: 228 EQIL 231
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 39/268 (14%)
Query: 314 IGTGRTGAT-YIAMLPGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
IG G G+ + P G + +KR+ + + +K+ L +++ + +R + ++ F
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV--MRSSDCPYIVQFY 87
Query: 371 VAKKERLLVYSYLE-NGTLYDKLHPAEHEVMHMDWPLRL--RIAIGSARGLAWLHHNCNP 427
A + +E T +DK + + V+ P + +I + + + L L N
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL-- 145
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
+IIHR+I ILLD KL DFG++ + VD+ T + G Y+APE
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKT---RDAGCRPYMAPERIDPS 200
Query: 488 VATP----KGDVYSFGVVLLELITGE-------------------RPTHLTNAPE-SFKG 523
+ + DV+S G+ L EL TG P L+N+ E F
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSP 260
Query: 524 SLVEWITLLNTNSSLETAIDKSLLGNGF 551
S + ++ L T + K LL + F
Sbjct: 261 SFINFVNLCLTKDESKRPKYKELLKHPF 288
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 26/182 (14%)
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL----HPAEHEVMHMDW 404
L E+ L + H N++ L +V G L+D++ +EH+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---- 124
Query: 405 PLRLRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNP 460
RI G+ ++H HN I+HR++ + ILL+ D + K+ DFGL+
Sbjct: 125 ----RIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
+T + G Y+APE R K DV+S GV+L L++G P + N +
Sbjct: 177 -----NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 521 FK 522
K
Sbjct: 231 LK 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 141 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NSFVGTA 195
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 26/182 (14%)
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL----HPAEHEVMHMDW 404
L E+ L + H N++ L +V G L+D++ +EH+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---- 124
Query: 405 PLRLRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNP 460
RI G+ ++H HN I+HR++ + ILL+ D + K+ DFGL+
Sbjct: 125 ----RIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
+T + G Y+APE R K DV+S GV+L L++G P + N +
Sbjct: 177 -----NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 521 FK 522
K
Sbjct: 231 LK 232
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Query: 339 EDSQHSE-KEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLV-YSYLENGTLYDKLH-- 393
E + HSE + +SE+ L + H N+V LLG C L+V + + G L L
Sbjct: 69 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
Query: 394 -----PAEHEVMHMDW---PLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
P + E ++ D+ + + A+G+ +L + + IHR+++++ ILL
Sbjct: 129 RNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKN 185
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKGDVYSFGVV 501
K+ DFGLAR + + GD L ++APE V T + DV+SFGV+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 502 LLELIT-GERPTHLTNAPESFKGSLVE 527
L E+ + G P E F L E
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTA 199
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 314 IGTGRTGATYIAMLPGGC------FIMIKRLEDSQHS--EKEFLSEINTLGSVRHRNLVP 365
+G R G Y L G + IK L+D +EF E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL--HPAEHEVMHMD----------WPLRLRIAIG 413
LLG + +++SY +G L++ L +V D P + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 414 SARGLAWL--HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG 471
A G+ +L HH ++H++++++ +L+ K+SD GL R + D + +
Sbjct: 137 IAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY--KLLGN 189
Query: 472 EFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+ ++APE + D++S+GVVL E+ +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 314 IGTGRTGATYIAMLPGGC------FIMIKRLEDSQHS--EKEFLSEINTLGSVRHRNLVP 365
+G R G Y L G + IK L+D +EF E ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL--HPAEHEVMHMD----------WPLRLRIAIG 413
LLG + +++SY +G L++ L +V D P + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 414 SARGLAWL--HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG 471
A G+ +L HH ++H++++++ +L+ K+SD GL R + D + +
Sbjct: 154 IAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY--KLLGN 206
Query: 472 EFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
+ ++APE + D++S+GVVL E+ +
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 314 IGTGRTGATY--IAMLPG--GCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLL 367
IG G+ G + I M P + IK ++ S ++FL E T+ H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
G V+ +E TL + + +D + A + LA+L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 428 RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL--GYVAPEYPR 485
R +HR+I+++ +L+ + KL DFGL+R M ST G L ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STXXKASKGKLPIKWMAPESIN 185
Query: 486 TLVATPKGDVYSFGVVLLE-LITGERP 511
T DV+ FGV + E L+ G +P
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 198
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 316 TGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375
TG AM ++++ +D+ H++ +E N L V+H +V L+ +
Sbjct: 40 TGANTGKIFAMKVLKKAMIVRNAKDTAHTK----AERNILEEVKHPFIVDLIYAFQTGGK 95
Query: 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNIS 435
L+ YL G L+ +L E E + M+ +A S L LH II+R++
Sbjct: 96 LYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISM-ALGHLHQKG---IIYRDLK 148
Query: 436 SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDV 495
+ I+L+ KL+DFGL + H T + G + Y+APE D
Sbjct: 149 PENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDW 204
Query: 496 YSFGVVLLELITGERP 511
+S G ++ +++TG P
Sbjct: 205 WSLGALMYDMLTGAPP 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTA 175
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTA 174
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 173
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 316 TGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375
TG AM ++++ +D+ H++ +E N L V+H +V L+ +
Sbjct: 40 TGANTGKIFAMKVLKKAMIVRNAKDTAHTK----AERNILEEVKHPFIVDLIYAFQTGGK 95
Query: 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNIS 435
L+ YL G L+ +L E E + M+ +A S L LH II+R++
Sbjct: 96 LYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISM-ALGHLHQKG---IIYRDLK 148
Query: 436 SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDV 495
+ I+L+ KL+DFGL + H T + G + Y+APE D
Sbjct: 149 PENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDW 204
Query: 496 YSFGVVLLELITGERP 511
+S G ++ +++TG P
Sbjct: 205 WSLGALMYDMLTGAPP 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 176
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 333 IMIKRL-EDSQHSE-KEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLVYS-YLENGTL 388
+ +K L E + HSE + +SE+ L + H N+V LLG C L+V + + + G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 389 YDKLHPAEHEV---------MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNIS 435
L +E ++ D+ L L + A+G+ +L + + IHR+++
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 436 SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATP 491
++ ILL K+ DFGLAR + ++ GD L ++APE V T
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPETIFDRVYTI 220
Query: 492 KGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
+ DV+SFGV+L E+ + G P E F L E
Sbjct: 221 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 198
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 196
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 196
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 198
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 199
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 141 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTA 195
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 196
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 198
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 126 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTA 180
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 370 CVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
C +RL V Y+ G L + +V P + A + GL +LH
Sbjct: 88 CFQTVDRLYFVMEYVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISIGLFFLHKRG--- 140
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLAR--LMNPVDTHLSTFVNGEF-GDLGYVAPEYPR 485
II+R++ ++LD + K++DFG+ + +M+ V T EF G Y+APE
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR-------EFCGTPDYIAPE--- 190
Query: 486 TLVATPKG---DVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542
+ P G D +++GV+L E++ G+ P + E F+ + ++ + S +I
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSI 250
Query: 543 DKSL--------LGNGFDGEL----HQFLR 560
K L LG G +GE H F R
Sbjct: 251 CKGLMTKHPAKRLGCGPEGERDVREHAFFR 280
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 339 EDSQHSE-KEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLVYS-YLENGTLYDKLHPA 395
E + HSE + +SE+ L + H N+V LLG C L+V + + + G L L
Sbjct: 58 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSK 117
Query: 396 EHEV---------MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442
+E ++ D+ L L + A+G+ +L + + IHR+++++ ILL
Sbjct: 118 RNEFVPYKVAPEDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 173
Query: 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKGDVYSF 498
K+ DFGLAR + ++ GD L ++APE V T + DV+SF
Sbjct: 174 EKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 499 GVVLLELIT-GERPTHLTNAPESFKGSLVE 527
GV+L E+ + G P E F L E
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 198
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
L +LH IIHR++ + ILL+ D +++DFG A++++P N G
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTA 201
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
YV+PE A D+++ G ++ +L+ G P N
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
+EI L ++H N+V L + L+ + G L+D++ E RL
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLI 122
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCIL---LDGDFEPKLSDFGLARLMNPVDTHLS 466
+ A + +LH + I+HR++ + +L LD D + +SDFGL+++ +P
Sbjct: 123 FQVLDA--VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-----G 172
Query: 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
+ ++ G GYVAPE + D +S GV+ L+ G P + N + F+ L
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
+EI L ++H N+V L + L+ + G L+D++ E RL
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLI 122
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCIL---LDGDFEPKLSDFGLARLMNPVDTHLS 466
+ A + +LH + I+HR++ + +L LD D + +SDFGL+++ +P
Sbjct: 123 FQVLDA--VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-----G 172
Query: 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
+ ++ G GYVAPE + D +S GV+ L+ G P + N + F+ L
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
+EI L ++H N+V L + L+ + G L+D++ E RL
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLI 122
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCIL---LDGDFEPKLSDFGLARLMNPVDTHLS 466
+ A + +LH + I+HR++ + +L LD D + +SDFGL+++ +P
Sbjct: 123 FQVLDA--VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-----G 172
Query: 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
+ ++ G GYVAPE + D +S GV+ L+ G P + N + F+ L
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 305 TNSFSKNNIIGTGRTGATYI---AMLPGGCFI-MIKRLEDSQHSEKE-FLSEINTLGSVR 359
++ + ++G G G + + C + +I + + Q ++KE L E+ L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
H N+ L F K LV G L+D++ + +D +R + G+
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 140
Query: 420 WLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNPVDTHL--STFVNGEFG 474
+ H N +I+HR++ + +LL+ D ++ DFGL+ TH S + G
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKDKIG 190
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELITG 508
Y+APE K DV+S GV+L L++G
Sbjct: 191 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 129/324 (39%), Gaps = 38/324 (11%)
Query: 279 KGTKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIKR 337
+G +G V F+ + +R +F IG G+ Y A L G + +K+
Sbjct: 6 QGMQGPPVPQFQPQ-KALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKK 64
Query: 338 LE-----DSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYD-- 390
++ D++ + + + EI+ L + H N++ + E +V + G L
Sbjct: 65 VQIFDLMDAK-ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMI 123
Query: 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
K + ++ + + + SA L H + R++HR+I + + KL
Sbjct: 124 KHFKKQKRLIPERTVWKYFVQLCSA-----LEHMHSRRVMHRDIKPANVFITATGVVKLG 178
Query: 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 510
D GL R + T + V + Y++PE K D++S G +L E+ +
Sbjct: 179 DLGLGRFFSSKTTAAHSLVGTPY----YMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234
Query: 511 PTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTP 570
P F G + + L + +E L + + EL Q + + C+ P P
Sbjct: 235 P---------FYG---DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNM---CINPDP 279
Query: 571 KERHTMFEVYQLLRAIAERYHFTT 594
++R + VY +A+R H T
Sbjct: 280 EKRPDVTYVYD----VAKRMHACT 299
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 46/267 (17%)
Query: 279 KGTKGIKVSAFEKSVEKMRLSDLMK----------ATNSFS------KNNI-----IGTG 317
+G G ++ + E + K+R S +M T+S S + NI +G G
Sbjct: 23 QGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHG 82
Query: 318 RTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLLGF 369
G Y + P + +K L + S+ E +FL E + H+N+V +G
Sbjct: 83 AFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGV 142
Query: 370 CVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
+ R ++ + G L L P + + L +A A G +L N
Sbjct: 143 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-- 200
Query: 427 PRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDLGYVA 480
IHR+I+++ LL K+ DFG+AR D + + + + ++
Sbjct: 201 -HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGCAMLPVKWMP 254
Query: 481 PEYPRTLVATPKGDVYSFGVVLLELIT 507
PE + T K D +SFGV+L E+ +
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 20/223 (8%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFI-----MIKRLEDSQHSEKEFLSEINTLGSVRH 360
+ F +G G+ G Y+A FI + K + + E + EI + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 361 RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW 420
N++ L + ++ L+ Y G LY +L + D I A L +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS----CTFDEQRTATIMEELADALMY 138
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF-GDLGYV 479
H ++IHR+I + +LL E K++DFG + H + G L Y+
Sbjct: 139 CH---GKKVIHRDIKPENLLLGLKGELKIADFGWS-------VHAPSLRRKTMCGTLDYL 188
Query: 480 APEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
PE + K D++ GV+ EL+ G P + E+++
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYR 231
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCV 371
+G G G Y A G K +E E ++++ EI L + H +V LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG--- 75
Query: 372 AKKERLLVYSYLENGTLYDKLH-----PAEHEVMHMDWPL-RLRIAIGSARGLAWLHHNC 425
+Y +G L+ + + ++ +D L +I + + L L+
Sbjct: 76 ---------AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP- 484
+ RIIHR++ + +L+ + + +L+DFG++ +F+ + ++APE
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY----WMAPEVVM 182
Query: 485 -RTLVATP---KGDVYSFGVVLLELITGERPTHLTN 516
T+ TP K D++S G+ L+E+ E P H N
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 218
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFC----VAKKERLLVYSYLENG 386
+ IK++ +H + L EI L RH N++ + + + + + + ++L
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA 130
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
LY L H+ + L + RGL ++H + ++HR++ +LL+ +
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQIL-----RGLKYIH---SANVLHRDLKPSNLLLNTTXD 182
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVV 501
K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G +
Sbjct: 183 LKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGCI 237
Query: 502 LLELITGERP 511
L E+++ RP
Sbjct: 238 LAEMLSN-RP 246
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 31/210 (14%)
Query: 339 EDSQHSE-KEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLV-YSYLENGTLYDKLHPA 395
E + HSE + +SE+ L + H N+V LLG C L+V + + G L L
Sbjct: 104 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 163
Query: 396 EHEV---------MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442
+E ++ D+ L L + A+G+ +L + + IHR+++++ ILL
Sbjct: 164 RNEFVPYKVAPEDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 219
Query: 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKGDVYSF 498
K+ DFGLAR + ++ GD L ++APE V T + DV+SF
Sbjct: 220 EKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 499 GVVLLELIT-GERPTHLTNAPESFKGSLVE 527
GV+L E+ + G P E F L E
Sbjct: 274 GVLLWEIFSLGASPYPGVKIDEEFCRRLKE 303
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 333 IMIKRL-EDSQHSE-KEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV-YSYLENGTL 388
+ +K L E + HSE + +SE+ L + H N+V LLG C L+V + + G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 389 YDKLHPAEHEV---------MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNIS 435
L +E ++ D+ L L + A+G+ +L + + IHR+++
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 436 SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATP 491
++ ILL K+ DFGLAR + ++ GD L ++APE V T
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPETIFDRVYTI 229
Query: 492 KGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
+ DV+SFGV+L E+ + G P E F L E
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 333 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL 392
I+ K L H ++ EI+ S+ H+++V GF +V +L + L
Sbjct: 71 IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-L 129
Query: 393 HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452
H + + LR + G +LH N R+IHR++ + L+ D E K+ DF
Sbjct: 130 HKRRKALTEPEARYYLRQIV---LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 183
Query: 453 GLARLMNPVDTHLSTFVNGE-----FGDLGYVAPEYPRTLVATPKG-----DVYSFGVVL 502
GLA + +GE G Y+APE V + KG DV+S G ++
Sbjct: 184 GLATKVE---------YDGERKKVLCGTPNYIAPE-----VLSKKGHSFEVDVWSIGCIM 229
Query: 503 LELITGERPTHLTNAPESF 521
L+ G+ P + E++
Sbjct: 230 YTLLVGKPPFETSCLKETY 248
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCV 371
+G G G Y A G K +E E ++++ EI L + H +V LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG--- 83
Query: 372 AKKERLLVYSYLENGTLYDKLH-----PAEHEVMHMDWPL-RLRIAIGSARGLAWLHHNC 425
+Y +G L+ + + ++ +D L +I + + L L+
Sbjct: 84 ---------AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP- 484
+ RIIHR++ + +L+ + + +L+DFG++ +F+ + ++APE
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY----WMAPEVVM 190
Query: 485 -RTLVATP---KGDVYSFGVVLLELITGERPTHLTN 516
T+ TP K D++S G+ L+E+ E P H N
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 333 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL 392
I+ K L H ++ EI+ S+ H+++V GF +V +L + L
Sbjct: 73 IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-L 131
Query: 393 HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452
H + + LR + G +LH N R+IHR++ + L+ D E K+ DF
Sbjct: 132 HKRRKALTEPEARYYLRQIV---LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185
Query: 453 GLARLMNPVDTHLSTFVNGE-----FGDLGYVAPEYPRTLVATPKG-----DVYSFGVVL 502
GLA + +GE G Y+APE V + KG DV+S G ++
Sbjct: 186 GLATKVE---------YDGERKKVLCGTPNYIAPE-----VLSKKGHSFEVDVWSIGCIM 231
Query: 503 LELITGERPTHLTNAPESF 521
L+ G+ P + E++
Sbjct: 232 YTLLVGKPPFETSCLKETY 250
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 333 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL 392
I+ K L H ++ EI+ S+ H+++V GF +V +L + L
Sbjct: 47 IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-L 105
Query: 393 HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452
H + + LR + G +LH N R+IHR++ + L+ D E K+ DF
Sbjct: 106 HKRRKALTEPEARYYLRQIV---LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159
Query: 453 GLARLMNPVDTHLSTFVNGE-----FGDLGYVAPEYPRTLVATPKG-----DVYSFGVVL 502
GLA + +GE G Y+APE V + KG DV+S G ++
Sbjct: 160 GLATKVE---------YDGERKKVLCGTPNYIAPE-----VLSKKGHSFEVDVWSIGCIM 205
Query: 503 LELITGERPTHLTNAPESF 521
L+ G+ P + E++
Sbjct: 206 YTLLVGKPPFETSCLKETY 224
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + + H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 210
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + + H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 31/210 (14%)
Query: 339 EDSQHSE-KEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLVYS-YLENGTLYDKLHPA 395
E + HSE + +SE+ L + H N+V LLG C L+V + + + G L L
Sbjct: 58 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSK 117
Query: 396 EHEV---------MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442
+E ++ D+ L L + A+G+ +L + + IHR+++++ ILL
Sbjct: 118 RNEFVPYKVAPEDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 173
Query: 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKGDVYSF 498
K+ DFGLAR + + GD L ++APE V T + DV+SF
Sbjct: 174 EKNVVKICDFGLARDIXKDPDXVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 499 GVVLLELIT-GERPTHLTNAPESFKGSLVE 527
GV+L E+ + G P E F L E
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 46/266 (17%)
Query: 280 GTKGIKVSAFEKSVEKMRLSDLMK----------ATNSFS------KNNI-----IGTGR 318
G G ++ + E + K+R S +M T+S S + NI +G G
Sbjct: 1 GAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGA 60
Query: 319 TGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLLGFC 370
G Y + P + +K L + S+ E +FL E + H+N+V +G
Sbjct: 61 FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS 120
Query: 371 VAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP 427
+ R ++ + G L L P + + L +A A G +L N
Sbjct: 121 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--- 177
Query: 428 RIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDLGYVAP 481
IHR+I+++ LL K+ DFG+AR D + + + + ++ P
Sbjct: 178 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGCAMLPVKWMPP 232
Query: 482 EYPRTLVATPKGDVYSFGVVLLELIT 507
E + T K D +SFGV+L E+ +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 209
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 210
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 209
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 339 EDSQHSE-KEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLV-YSYLENGTLYDKLHPA 395
E + HSE + +SE+ L + H N+V LLG C L+V + + G L L
Sbjct: 58 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 117
Query: 396 EHEV---------MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442
+E ++ D+ L L + A+G+ +L + + IHR+++++ ILL
Sbjct: 118 RNEFVPYKVAPEDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 173
Query: 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKGDVYSF 498
K+ DFGLAR + + GD L ++APE V T + DV+SF
Sbjct: 174 EKNVVKICDFGLARDIXKDPDXVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 499 GVVLLELIT-GERPTHLTNAPESFKGSLVE 527
GV+L E+ + G P E F L E
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 339 EDSQHSE-KEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV-YSYLENGTLYDKLHPA 395
E + HSE + +SE+ L + H N+V LLG C L+V + + G L L
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
Query: 396 EHEV---------MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442
+E ++ D+ L L + A+G+ +L + + IHR+++++ ILL
Sbjct: 127 RNEFVPYKVAPEDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 182
Query: 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATPKGDVYSF 498
K+ DFGLAR + + GD L ++APE V T + DV+SF
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRK------GDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 499 GVVLLELIT-GERPTHLTNAPESFKGSLVE 527
GV+L E+ + G P E F L E
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 226
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 370 CVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
C +RL V Y+ G L + +V P + A A GL +L
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLFFLQSKG--- 141
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLAR--LMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
II+R++ ++LD + K++DFG+ + + + V T G Y+APE
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC------GTPDYIAPE---I 192
Query: 487 LVATPKG---DVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543
+ P G D ++FGV+L E++ G+ P + E F+ + + + S AI
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAIC 252
Query: 544 KSL--------LGNGFDGEL----HQFLR 560
K L LG G +GE H F R
Sbjct: 253 KGLMTKHPGKRLGCGPEGERDIKEHAFFR 281
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 201
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHRNLVPLLGF 369
+G+G GA A+ G + IK+L SE K E+ L +RH N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 370 CVAKK------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSA-RGLAWLH 422
+ + LV ++ GT KL +HE + D R++ + +GL ++H
Sbjct: 93 FTPDETLDDFTDFYLVMPFM--GTDLGKL--MKHEKLGED---RIQFLVYQMLKGLRYIH 145
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
IIHR++ + ++ D E K+ DFGLAR D+ + V + Y APE
Sbjct: 146 AAG---IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVTRW----YRAPE 195
Query: 483 YPRTLVA-TPKGDVYSFGVVLLELITGE 509
+ T D++S G ++ E+ITG+
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L + RH N++ + A K+ +V +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L + RGL ++H + ++HR++ +LL+
Sbjct: 113 D-LYKLLKTQHLSNDHICYFLYQIL-----RGLKYIH---SANVLHRDLKPSNLLLNTTC 163
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 164 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 218
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 219 ILAEMLSN-RP 228
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 216
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 348 FLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLR 407
L E+ L + H N++ L F K+ LV G L+D++ + +D +
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVI 109
Query: 408 LRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNPVDT 463
++ + G +LH HN I+HR++ + +LL+ D K+ DFGL+
Sbjct: 110 MKQVLS---GTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLS-----AHF 157
Query: 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
+ + G Y+APE R K DV+S GV+L L+ G P
Sbjct: 158 EVGGKMKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPP 204
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 370 CVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
C +RL V Y+ G L + +V P + A A GL +L +
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLFFLQ---SKG 462
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLAR--LMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
II+R++ ++LD + K++DFG+ + + + V T G Y+APE
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC------GTPDYIAPE---I 513
Query: 487 LVATPKG---DVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543
+ P G D ++FGV+L E++ G+ P + E F+ + + + S AI
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAIC 573
Query: 544 KSL--------LGNGFDGEL----HQFLR 560
K L LG G +GE H F R
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAFFR 602
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L + RH N++ + A K+ +V +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L + RGL ++H + ++HR++ +LL+
Sbjct: 113 D-LYKLLKTQHLSNDHICYFLYQIL-----RGLKYIH---SANVLHRDLKPSNLLLNTTS 163
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 164 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 218
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 219 ILAEMLSN-RP 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 333 IMIKRL-EDSQHSE-KEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV-YSYLENGTL 388
+ +K L E + HSE + +SE+ L + H N+V LLG C L+V + + G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 389 YDKLHPAEHEV---------MHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNIS 435
L +E ++ D+ L L + A+G+ +L + + IHR+++
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 436 SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD----LGYVAPEYPRTLVATP 491
++ ILL K+ DFGLAR + + GD L ++APE V T
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIYKDPDXVRK------GDARLPLKWMAPETIFDRVYTI 229
Query: 492 KGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
+ DV+SFGV+L E+ + G P E F L E
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+AR D + +++ +
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 236
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 18/229 (7%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ L+E L + RH L L
Sbjct: 160 TFGKVILVKEKATGRYYAMKILKKEVIVAK--DEVAHT----LTENRVLQNSRHPFLTAL 213
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V D I SA L +LH
Sbjct: 214 -KYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--LDYLHSEK 268
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
N +++R++ + ++LD D K++DFGL + + TF G Y+APE
Sbjct: 269 N--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC----GTPEYLAPEVLE 322
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534
D + GVV+ E++ G P + + + F+ L+E I T
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 371
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A ++ +V +E
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L + H+ + L + RGL ++H + ++HR++ +L++
Sbjct: 131 D-LYKLLKSQQLSNDHICYFLYQIL-----RGLKYIH---SANVLHRDLKPSNLLINTTC 181
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 182 DLKICDFGLARIADPEHDH-TGFLTEXVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 236
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 237 ILAEMLSN-RP 246
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 14/211 (6%)
Query: 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLE--DSQHSEKEFLSEINTLGSVRHR 361
++ F +++G G G A P G + IK++E D L EI L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N++ + Y+ + LH M D ++ I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
H + +IHR++ +L++ + + K+ DFGLAR+++ S + G YVA
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 482 EY---PRTLVATPK----GDVYSFGVVLLEL 505
+ P ++ + K DV+S G +L EL
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 337 RLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAE 396
RLE + + + E++ L ++H N+V L +K LV+ YL+ L L
Sbjct: 36 RLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKD-LKQYLDDCG 94
Query: 397 HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456
+ + + L L RGLA+ H +++HR++ + +L++ E KL+DFGLAR
Sbjct: 95 NIINMHNVKLFL---FQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148
Query: 457 LMN-PVDTHLSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHL 514
+ P T+ + E L Y P+ + + + D++ G + E+ TG RP
Sbjct: 149 AKSIPTKTY-----DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPL-- 200
Query: 515 TNAPESFKGSLVE 527
F GS VE
Sbjct: 201 ------FPGSTVE 207
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 348 FLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLR 407
L E+ L + H N++ L F K+ LV G L+D++ + +D +
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVI 126
Query: 408 LRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNPVDT 463
++ + G +LH HN I+HR++ + +LL+ D K+ DFGL+
Sbjct: 127 MKQVLS---GTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLS-----AHF 174
Query: 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
+ + G Y+APE R K DV+S GV+L L+ G P
Sbjct: 175 EVGGKMKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPP 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 18/229 (7%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ L+E L + RH L L
Sbjct: 163 TFGKVILVKEKATGRYYAMKILKKEVIVAK--DEVAHT----LTENRVLQNSRHPFLTAL 216
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V D I SA L +LH
Sbjct: 217 -KYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--LDYLHSEK 271
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
N +++R++ + ++LD D K++DFGL + + TF G Y+APE
Sbjct: 272 N--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC----GTPEYLAPEVLE 325
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534
D + GVV+ E++ G P + + + F+ L+E I T
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 374
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 32/237 (13%)
Query: 301 LMKATNSFSKNNIIGTGRTG-ATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR 359
+M ++ + IG G G A + + +K +E + ++ EI S+R
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR--- 416
H N+V + +V Y G L++++ A R + AR
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFF 121
Query: 417 -----GLAWLHHNCNPRIIHRNISSKCILLDGDFEP--KLSDFGLARLMNPVDTHLSTFV 469
G+++ H ++ HR++ + LLDG P K++DFG ++ + L +
Sbjct: 122 QQLISGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-----SVLHSQP 173
Query: 470 NGEFGDLGYVAPEYPRTLVATPK-GDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
G Y+APE K DV+S GV L ++ G P P++F+ ++
Sbjct: 174 KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 111 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTX 161
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 162 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 216
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 217 ILAEMLSN-RP 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR--LMNPV-----DTHLST 467
ARG+ +L + IHR+++++ ILL + K+ DFGLAR NP DT L
Sbjct: 209 ARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP- 264
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526
L ++APE + + K DV+S+GV+L E+ + G P E F L
Sbjct: 265 --------LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLR 316
Query: 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583
E + + S E++Q + +C PKER E+ + L
Sbjct: 317 EGMRMRAPEYSTP--------------EIYQIM---LDCWHRDPKERPRFAELVEKL 356
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 347 EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL--YDKLHPAEHEVMHMDW 404
+F +E+ + +++ + G E ++Y Y+EN ++ +D+ +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 405 PLR-LRIAIGSA-RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
P++ ++ I S +++H+ N I HR++ IL+D + KLSDFG + M VD
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYM--VD 204
Query: 463 THLSTFVNGEFGDLGYVAPEY--PRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
+ G G ++ PE+ + K D++S G+ L + P S
Sbjct: 205 KK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV-------VPFS 253
Query: 521 FKGSLVEWITLLNTNSSLETAIDKS 545
K SLVE + T ++E +D++
Sbjct: 254 LKISLVELFNNIRT-KNIEYPLDRN 277
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHS--EKEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 115 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTX 165
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 166 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 220
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 221 ILAEMLSN-RP 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 115 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTX 165
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 166 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 220
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 221 ILAEMLSN-RP 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 111 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTX 161
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 162 DLKIXDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 216
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 217 ILAEMLSN-RP 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 111 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTX 161
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 162 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 216
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 217 ILAEMLSN-RP 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 111 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 161
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 162 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 216
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 217 ILAEMLSN-RP 226
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 32/237 (13%)
Query: 301 LMKATNSFSKNNIIGTGRTG-ATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR 359
+M ++ + IG+G G A + + +K +E + ++ EI S+R
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 72
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR--- 416
H N+V + +V Y G L++++ A R + AR
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFF 120
Query: 417 -----GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS--DFGLARLMNPVDTHLSTFV 469
G+++ H ++ HR++ + LLDG P+L DFG ++ + L +
Sbjct: 121 QQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQP 172
Query: 470 NGEFGDLGYVAPEYPRTLVATPK-GDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
G Y+APE K DV+S GV L ++ G P P++F+ ++
Sbjct: 173 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L + RGL ++H + ++HR++ +LL+
Sbjct: 113 D-LYKLLKTQHLSNDHICYFLYQIL-----RGLKYIH---SANVLHRDLKPSNLLLNTTC 163
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 164 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 218
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 219 ILAEMLSN-RP 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 115 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 165
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 166 DLKICDFGLARVADPDHDH-TGFLXEXVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 220
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 221 ILAEMLSN-RP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 116 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 166
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 167 DLKICDFGLARVADPDHDH-TGFLXEXVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 221
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 222 ILAEMLSN-RP 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLE--DSQHSEKEFLSEINTLGSVRHR 361
++ F +++G G G A P G + IK++E D L EI L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N++ + Y+ + LH M D ++ I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
H + +IHR++ +L++ + + K+ DFGLAR+++ S + G + +VA
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 482 EY---PRTLVATPK----GDVYSFGVVLLEL 505
+ P ++ + K DV+S G +L EL
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 59 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 118
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L + RGL ++H + ++HR++ +LL+
Sbjct: 119 D-LYKLLKTQHLSNDHICYFLYQIL-----RGLKYIH---SANVLHRDLKPSNLLLNTTC 169
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 170 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 224
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 225 ILAEMLSN-RP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L + RGL ++H + ++HR++ +LL+
Sbjct: 111 D-LYKLLKTQHLSNDHICYFLYQIL-----RGLKYIH---SANVLHRDLKPSNLLLNTTC 161
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 162 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 216
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 217 ILAEMLSN-RP 226
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 343 HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM 402
H +++ +EI S+ + ++V GF +V +L + LH V
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP 142
Query: 403 DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
+ +R I +G+ +LH+N R+IHR++ + L+ D + K+ DFGLA +
Sbjct: 143 EARYFMRQTI---QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG 196
Query: 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLELITGERPTHLTNA 517
T G Y+APE V KG D++S G +L L+ G+ P +
Sbjct: 197 ERKKTLC----GTPNYIAPE-----VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
Query: 518 PESF 521
E++
Sbjct: 248 KETY 251
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 116 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 166
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 167 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 221
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 222 ILAEMLSN-RP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 57 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 116
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 117 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 167
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 168 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 222
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 223 ILAEMLSN-RP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 48 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 107
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 108 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 158
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 159 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 213
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 214 ILAEMLSN-RP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 115 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 165
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 166 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 220
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 221 ILAEMLSN-RP 230
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 32/190 (16%)
Query: 333 IMIKRLEDSQHSEKE-FLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDK 391
+++K L+ + + E F + + + H++LV G CV E +LV +++ G+L D
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSL-DT 101
Query: 392 LHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP---- 447
+++ W +L +A A + +L N +IH N+ +K ILL + +
Sbjct: 102 YLKKNKNCINILW--KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
Query: 448 ----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSF 498
KLSD G++ + P D L P P + PK D +SF
Sbjct: 157 PPFIKLSDPGISITVLPKDI------------LQERIPWVPPECIENPKNLNLATDKWSF 204
Query: 499 GVVLLELITG 508
G L E+ +G
Sbjct: 205 GTTLWEICSG 214
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 109 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 159
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 160 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 214
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 215 ILAEMLSN-RP 224
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 306 NSFSKNNIIGTGRTGATYI-------------AMLPGGCFIMIKRLEDSQHSEKEFLSEI 352
+F ++GTG G ++ AM ++++ + ++H+ +E
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR----TER 109
Query: 353 NTLGSVRHRNLVPLLGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIA 411
L +R + L + + +L L+ Y+ G L+ L E H ++I
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH-----EVQIY 164
Query: 412 IGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG 471
+G + L H II+R+I + ILLD + L+DFGL++ +T +
Sbjct: 165 VGEI--VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY---- 218
Query: 472 EF-GDLGYVAPEYPRTLVATPKG--DVYSFGVVLLELITGERP 511
+F G + Y+AP+ R + D +S GV++ EL+TG P
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L RGL ++H + ++HR++ +LL+
Sbjct: 109 D-LYKLLKTQHLSNDHICYFL-----YQILRGLKYIH---SANVLHRDLKPSNLLLNTTC 159
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 160 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 214
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 215 ILAEMLSN-RP 224
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAK-----KERLLVYSYLEN 385
+ IK++ +H + L EI L RH N++ + A K+ +V +E
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 130
Query: 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445
LY L H+ + L + RGL ++H + ++HR++ +LL+
Sbjct: 131 D-LYKLLKTQHLSNDHICYFLYQIL-----RGLKYIH---SANVLHRDLKPSNLLLNTTC 181
Query: 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGV 500
+ K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G
Sbjct: 182 DLKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGC 236
Query: 501 VLLELITGERP 511
+L E+++ RP
Sbjct: 237 ILAEMLSN-RP 246
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 402 MDWPLRLRIAIGSARGL-AWLHHNCNPRIIHRNISSKCILL--DGDFEPKLSDFGLARLM 458
+D+ R ++ R + + LH+ N I HR+I + L + FE KL DFGL++
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220
Query: 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVAT--PKGDVYSFGVVLLELITGERPTHLTN 516
++ + + G +VAPE T + PK D +S GV+L L+ G P N
Sbjct: 221 YKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN 280
Query: 517 APESFKGSLVEWITLLNTNSSLETAIDKSLLGN 549
++ L + + N N ++ + + + LL N
Sbjct: 281 DADTISQVLNKKLCFENPNYNVLSPLARDLLSN 313
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 34/191 (17%)
Query: 333 IMIKRLEDSQHSEKE-FLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDK 391
+++K L+ + + E F + + + H++LV G C E +LV +++ G+L D
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSL-DT 101
Query: 392 LHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR-IIHRNISSKCILLDGDFEP--- 447
+++ W L + A+ LAW H +IH N+ +K ILL + +
Sbjct: 102 YLKKNKNCINILWKLEV------AKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTG 155
Query: 448 -----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYS 497
KLSD G++ + P D L P P + PK D +S
Sbjct: 156 NPPFIKLSDPGISITVLPKDI------------LQERIPWVPPECIENPKNLNLATDKWS 203
Query: 498 FGVVLLELITG 508
FG L E+ +G
Sbjct: 204 FGTTLWEICSG 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 38/281 (13%)
Query: 257 MRGVYVKKKEDDPEGNK----WAKRIKGT--KGIKVSAFEKSVEKMRLSDLMKATNSFSK 310
R +++ DDP + AK++ KG + F+ + L D A + K
Sbjct: 36 QRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQK 95
Query: 311 ---NNIIGTGRTGATY--IAMLPGGCF------IMIKRLEDSQHSE--KEFLSEINTLGS 357
++IG G + + G F + +RL Q E + E + L
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 358 VR-HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR 416
V H +++ L+ + LV+ + G L+D L E + + I
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT----EKVALSEKETRSIMRSLLE 211
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
+++LH N I+HR++ + ILLD + + +LSDFG + + P + + G
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-----LRELCGTP 263
Query: 477 GYVAPEYPR-TLVATPKG-----DVYSFGVVLLELITGERP 511
GY+APE + ++ T G D+++ GV+L L+ G P
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 21/179 (11%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKL----HPAEHEVMHMDWP 405
+EI L ++RH+++ L + +V Y G L+D + +E E +
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQ 116
Query: 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL-ARLMNPVDTH 464
+ +A ++G A HR++ + +L D + KL DFGL A+ D H
Sbjct: 117 IVSAVAYVHSQGYA-----------HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 465 LSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522
L T G L Y APE + + DV+S G++L L+ G P N +K
Sbjct: 166 LQTCC----GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYK 220
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 314 IGTGRTGATYIAML------PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVP 365
+G G G Y + P + +K L + S+ E +FL E + H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 366 LLGFCVAKKERLLVYSYLENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
+G + R ++ + G L L P + + L +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 423 HNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLMNPVDTHLSTFVNG---EFGDL 476
N IHR+I+++ LL K+ DFG+A+ D + +++ +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ-----DIYRASYYRKGGCAMLPV 210
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
++ PE + T K D +SFGV+L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 333 IMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFC----VAKKERLLVYSYLENG 386
+ IK++ +H + L EI L RH N++ + + + + + + L
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446
LY L + H+ RGL ++H + ++HR++ +LL+ +
Sbjct: 115 DLYKLL-----KCQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCD 166
Query: 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVV 501
K+ DFGLAR+ +P H + F+ Y APE ++ KG D++S G +
Sbjct: 167 LKICDFGLARVADPDHDH-TGFLTEYVATRWYRAPE----IMLNSKGYTKSIDIWSVGCI 221
Query: 502 LLELITGERP 511
L E+++ RP
Sbjct: 222 LAEMLSN-RP 230
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 31/211 (14%)
Query: 332 FIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDK 391
+ +K +E ++ EI S+RH N+V + ++ Y G LY++
Sbjct: 47 LVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYER 106
Query: 392 LHPAEHEVMHMDWPLRLRIAIGSAR--------GLAWLHHNCNPRIIHRNISSKCILLDG 443
+ A R + AR G+++ H + +I HR++ + LLDG
Sbjct: 107 ICNAG------------RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDG 151
Query: 444 DFEPKLS--DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEY-PRTLVATPKGDVYSFGV 500
P+L DFG ++ + L + G Y+APE R DV+S GV
Sbjct: 152 SPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206
Query: 501 VLLELITGERPTHLTNAPESFKGSLVEWITL 531
L ++ G P P ++ ++ +++
Sbjct: 207 TLYVMLVGAYPFEDPEEPRDYRKTIQRILSV 237
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 341 SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM 400
SQ ++ +EI L S+ H N++ + +V E G L +++ A+
Sbjct: 60 SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK 119
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP----KLSDFGLAR 456
+ + LA+ H + ++H+++ + IL D P K+ DFGLA
Sbjct: 120 ALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAE 175
Query: 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
L D H + G Y+APE + V T K D++S GVV+ L+TG P
Sbjct: 176 LFKS-DEHSTNAA----GTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLP 224
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + ++HR++ +LL+ + K+ DFGLAR+ +P H + F+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 194
Query: 476 LGYVAPEYPRTLVATPKG-----DVYSFGVVLLELITGERP 511
Y APE ++ KG D++S G +L E+++ RP
Sbjct: 195 RWYRAPE----IMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 31/189 (16%)
Query: 343 HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM 402
H +++ +EI S+ + ++V GF +V +L + LH V
Sbjct: 68 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP 126
Query: 403 DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
+ +R I +G+ +LH+N R+IHR++ + L+ D + K+ DFGLA +
Sbjct: 127 EARYFMRQTI---QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--- 177
Query: 463 THLSTFVNGE-----FGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLELITGERPT 512
+GE G Y+APE V KG D++S G +L L+ G+ P
Sbjct: 178 ------FDGERKKDLCGTPNYIAPE-----VLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
Query: 513 HLTNAPESF 521
+ E++
Sbjct: 227 ETSCLKETY 235
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 23/216 (10%)
Query: 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLV 364
++ F + +G G T Y G ++ +K +EI L + H N++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 365 PLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR----GLAW 420
L E LV + G L+D++ + R A + + +A+
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGY--------YSERDAADAVKQILEAVAY 163
Query: 421 LHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLG 477
LH N I+HR++ + +L D K++DFGL++++ + G G
Sbjct: 164 LHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH-----QVLMKTVCGTPG 215
Query: 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513
Y APE R P+ D++S G++ L+ G P +
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + + G
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVAT 192
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 193 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVAT 196
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 197 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 230
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 31/189 (16%)
Query: 343 HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM 402
H +++ +EI S+ + ++V GF +V +L + LH V
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP 142
Query: 403 DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
+ +R I +G+ +LH+N R+IHR++ + L+ D + K+ DFGLA +
Sbjct: 143 EARYFMRQTI---QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--- 193
Query: 463 THLSTFVNGE-----FGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLELITGERPT 512
+GE G Y+APE V KG D++S G +L L+ G+ P
Sbjct: 194 ------FDGERKKDLCGTPNYIAPE-----VLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 513 HLTNAPESF 521
+ E++
Sbjct: 243 ETSCLKETY 251
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + + G
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVAT 192
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 193 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVAT 190
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 191 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 224
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + + G
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVAT 192
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 193 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVAT 190
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 191 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 224
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 31/189 (16%)
Query: 343 HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM 402
H +++ +EI S+ + ++V GF +V +L + LH V
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP 142
Query: 403 DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462
+ +R I +G+ +LH+N R+IHR++ + L+ D + K+ DFGLA +
Sbjct: 143 EARYFMRQTI---QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE--- 193
Query: 463 THLSTFVNGE-----FGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLELITGERPT 512
+GE G Y+APE V KG D++S G +L L+ G+ P
Sbjct: 194 ------FDGERKKXLCGTPNYIAPE-----VLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 513 HLTNAPESF 521
+ E++
Sbjct: 243 ETSCLKETY 251
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHE-RMSYLLYQMLVGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S GV++ E+I G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 314 IGTGRTG---ATYIAMLPGGCFI--MIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLG 368
IG+G G A Y A+L I + + ++ H+++ + E+ + V H+N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLN 90
Query: 369 FCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428
+K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 91 VFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHE-RMSYLLYQMLVGIKHLHSAG 146
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV 488
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILGMG 201
Query: 489 ATPKGDVYSFGVVLLELITG 508
D++S GV++ E+I G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 301 LMKATNSFSKNNIIGTGRTG-ATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR 359
+M ++ + IG+G G A + + +K +E + EI S+R
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLR 73
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR--- 416
H N+V + +V Y G L++++ A R + AR
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFF 121
Query: 417 -----GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS--DFGLARLMNPVDTHLSTFV 469
G+++ H ++ HR++ + LLDG P+L DFG ++ + L +
Sbjct: 122 QQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQP 173
Query: 470 NGEFGDLGYVAPEYPRTLVATPK-GDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
G Y+APE K DV+S GV L ++ G P P++F+ ++
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 18/229 (7%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ L+E L + RH L L
Sbjct: 20 TFGKVILVKEKATGRYYAMKILKKEVIVAK--DEVAHT----LTENRVLQNSRHPFLTAL 73
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V D I SA L +LH
Sbjct: 74 -KYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--LDYLHSEK 128
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
N +++R++ + ++LD D K++DFGL + + F G Y+APE
Sbjct: 129 N--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC----GTPEYLAPEVLE 182
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534
D + GVV+ E++ G P + + + F+ L+E I T
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 231
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A + +L G + +K+L ++ H+++ + E+ L V H+N++ L
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISL 86
Query: 367 LGFCVAKK---ERLLVYSYLE--NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
L +K E VY +E + L +H M +D R++ + L +
Sbjct: 87 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIH------MELD---HERMSYLLYQMLCGI 137
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
H + IIHR++ I++ D K+ DFGLAR + + ++ +V + Y AP
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS-TNFMMTPYVVTRY----YRAP 192
Query: 482 EYPRTLVATPKGDVYSFGVVLLELITG 508
E + D++S G ++ EL+ G
Sbjct: 193 EVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRL---EDSQHSEKEFLSEINTLGSVRHR 361
+ K IG G G + A + +KR+ +D + L EI L ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 362 NLVPLLGFCVAKKERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
N+V L + K+ LV+ + + +D + +D + +GL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN------GDLDPEIVKSFLFQLLKGLG 115
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H ++HR++ + +L++ + E KL+DFGLAR PV + + E L Y
Sbjct: 116 FCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY-----SAEVVTLWY 167
Query: 479 VAPE--YPRTLVATPKGDVYSFGVVLLELITGERP 511
P+ + L +T D++S G + EL RP
Sbjct: 168 RPPDVLFGAKLYST-SIDMWSAGCIFAELANAARP 201
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVAT 187
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 188 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 18/229 (7%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ L+E L + RH L L
Sbjct: 22 TFGKVILVKEKATGRYYAMKILKKEVIVAK--DEVAHT----LTENRVLQNSRHPFLTAL 75
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V D I SA L +LH
Sbjct: 76 -KYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--LDYLHSEK 130
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
N +++R++ + ++LD D K++DFGL + + F G Y+APE
Sbjct: 131 N--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC----GTPEYLAPEVLE 184
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534
D + GVV+ E++ G P + + + F+ L+E I T
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVAT 191
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 192 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 18/229 (7%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ L+E L + RH L L
Sbjct: 21 TFGKVILVKEKATGRYYAMKILKKEVIVAK--DEVAHT----LTENRVLQNSRHPFLTAL 74
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V D I SA L +LH
Sbjct: 75 -KYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--LDYLHSEK 129
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
N +++R++ + ++LD D K++DFGL + + F G Y+APE
Sbjct: 130 N--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC----GTPEYLAPEVLE 183
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534
D + GVV+ E++ G P + + + F+ L+E I T
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 197
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 198 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 231
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 192
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 193 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR D ++ FV +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW-- 187
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 188 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 190
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 191 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR D ++ FV +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW-- 187
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 188 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNAMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 184
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 185 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 197
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 198 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 195
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 196 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 229
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 197
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 198 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 191
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 192 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 187
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 188 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 196
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 197 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 187
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 188 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 187
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 188 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVAT 205
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 206 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 190
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 191 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 191
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 192 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 191
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 192 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 29/207 (14%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A + +L G + +K+L ++ H+++ + E+ L V H+N++ L
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISL 88
Query: 367 LGFCVAKK---ERLLVYSYLE--NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
L +K E VY +E + L +H M +D R++ + L +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIH------MELD---HERMSYLLYQMLCGI 139
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
H + IIHR++ I++ D K+ DFGLAR + ++ +V + Y AP
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC-TNFMMTPYVVTRY----YRAP 194
Query: 482 EYPRTLVATPKGDVYSFGVVLLELITG 508
E + D++S G ++ EL+ G
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474
A+G+ +L + + IHR+++++ ILL K+ DFGLAR + ++ G
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------G 251
Query: 475 D----LGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
D L ++APE V T + DV+SFGV+L E+ + G P E F L E
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 309
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 205
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 206 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 205
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 206 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 239
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 204
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 205 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 238
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
+ E L V R +V L K + LV + + G + ++ + + P
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--- 289
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
R +A+ ++ L H II+R++ + +LLD D ++SD GLA + T
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---- 345
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G G G++APE D ++ GV L E+I P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
+ E L V R +V L K + LV + + G + ++ + + P
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--- 289
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
R +A+ ++ L H II+R++ + +LLD D ++SD GLA + T
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---- 345
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G G G++APE D ++ GV L E+I P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 182
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 183 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 204
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 205 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 238
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 350 SEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLR 409
+EI+ + + H L+ L K E +L+ +L G L+D++ ++++ + +R
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 410 IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP--KLSDFGLARLMNPVDTHLST 467
A GL +H + I+H +I + I+ + K+ DFGLA +NP + T
Sbjct: 157 QA---CEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT 210
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKG---DVYSFGVVLLELITGERP 511
EF APE + P G D+++ GV+ L++G P
Sbjct: 211 TATAEFA-----APE---IVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 183
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 184 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 208
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 209 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 242
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 181
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 182 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 215
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR D ++ FV +
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW-- 183
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 184 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 215
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 181
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 182 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 215
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 182
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 183 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 181
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 182 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 215
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
+ E L V R +V L K + LV + + G + ++ + + P
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--- 289
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
R +A+ ++ L H II+R++ + +LLD D ++SD GLA + T
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---- 345
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G G G++APE D ++ GV L E+I P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 349 LSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL 408
+ E L V R +V L K + LV + + G + ++ + + P
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--- 289
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
R +A+ ++ L H II+R++ + +LLD D ++SD GLA + T
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---- 345
Query: 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G G G++APE D ++ GV L E+I P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVAT 208
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 209 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 242
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474
A+G+ +L + + IHR+++++ ILL K+ DFGLAR + ++ G
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------G 253
Query: 475 D----LGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
D L ++APE V T + DV+SFGV+L E+ + G P E F L E
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 311
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 302 MKATN---SFSKNNIIGTGRTGATYIAM--LPGGCFIM--IKRLEDSQHSEKEFLSEINT 354
M+ TN +F ++G+G ++ L G F + IK+ + S E +EI
Sbjct: 2 MQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE--NEIAV 59
Query: 355 LGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVM-HMDWPLRLRIAIG 413
L ++H N+V L + LV + G L+D++ E V D L ++ +
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRI--LERGVYTEKDASLVIQQVLS 117
Query: 414 SARGLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
+ + +LH N I+HR++ + +L + + + ++DFGL+++ + ++
Sbjct: 118 AVK---YLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ------NGIMS 165
Query: 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G GYVAPE + D +S GV+ L+ G P
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474
A+G+ +L + + IHR+++++ ILL K+ DFGLAR + ++ G
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------G 260
Query: 475 D----LGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
D L ++APE V T + DV+SFGV+L E+ + G P E F L E
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 318
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 110
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 169
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 226
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 227 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 254
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 330 GCFIMIKRLE---DSQHSEKEFLSEINTLGSVRHRNLVPL---LGFCVAKKERLLVYSYL 383
G + IK++ D + K L E+ L +H N++ + L V E VY L
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 139
Query: 384 ENGTLYDKLHPAEHEVMHMDWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNISSKCI 439
D + H+++H PL L RGL ++H + ++IHR++ +
Sbjct: 140 ------DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNL 190
Query: 440 LLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-DVYSF 498
L++ + E K+ DFG+AR + F+ Y APE +L + D++S
Sbjct: 191 LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 250
Query: 499 GVVLLELIT 507
G + E++
Sbjct: 251 GCIFGEMLA 259
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 346 KEFLSEINTLGSVRHRNLVPL---LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM 402
K L E+ L +H N++ + L V E VY L D + H+++H
Sbjct: 98 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL------DLMESDLHQIIHS 151
Query: 403 DWPLRLR----IAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458
PL L RGL ++H + ++IHR++ +L++ + E K+ DFG+AR +
Sbjct: 152 SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
Query: 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-DVYSFGVVLLELIT 507
F+ Y APE +L + D++S G + E++
Sbjct: 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 88
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 147
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 148 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 205 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 232
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 395 AEHEVMHMDWPLRLRI----AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450
AE M P+ RI + + L +L +IHR++ ILLD + KL
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLC 167
Query: 451 DFGLA-RLMNPVDTHLSTFVNGEFGDLGYVAPEY-----PRTLVATPKGDVYSFGVVLLE 504
DFG++ RL++ S G Y+APE P + DV+S G+ L+E
Sbjct: 168 DFGISGRLVDDKAKDRSA------GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 505 LITGERP 511
L TG+ P
Sbjct: 222 LATGQFP 228
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474
A+G+ +L + + IHR+++++ ILL K+ DFGLAR + ++ G
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------G 258
Query: 475 D----LGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527
D L ++APE V T + DV+SFGV+L E+ + G P E F L E
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 316
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 31/199 (15%)
Query: 324 IAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSY 382
I + GG F E+ Q + L E++ L V H N++ L LV+
Sbjct: 50 IDVTGGGSF----SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 383 LENGTLYD----KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438
++ G L+D K+ +E E + +R + + A H N I+HR++ +
Sbjct: 106 MKKGELFDYLTEKVTLSEKETRKI---MRALLEVICAL------HKLN--IVHRDLKPEN 154
Query: 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVAT------PK 492
ILLD D KL+DFG + ++P + S G Y+APE + +
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLRSV-----CGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV++ L+ G P
Sbjct: 210 VDMWSTGVIMYTLLAGSPP 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 104
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 163
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 164 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 220
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 221 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 248
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 95
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 154
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 155 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 211
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 212 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 84
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 143
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 144 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 200
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 201 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 88
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 147
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 148 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 205 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
+G+ +LH+ +IIHR+I +L+ D K++DFG++ D LS V G
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV----GT 200
Query: 476 LGYVAPEY---PRTLVATPKGDVYSFGVVLLELITGERP 511
++APE R + + DV++ GV L + G+ P
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 110
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 169
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 226
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 227 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 254
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 77
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 136
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 137 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 193
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 194 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 80
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 139
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 140 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 196
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 197 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 345 EKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDW 404
E +EI L ++H N+V L + LV + G L+D++ + D
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDA 122
Query: 405 PLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCIL-LDGDFEPK--LSDFGLARLMNPV 461
+R + + + +LH I+HR++ + +L D E K +SDFGL+++
Sbjct: 123 STLIRQVLDA---VYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG 176
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521
D +ST G GYVAPE + D +S GV+ L+ G P + N + F
Sbjct: 177 DV-MSTAC----GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLF 231
Query: 522 KGSL 525
+ L
Sbjct: 232 EQIL 235
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 81
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 140
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 141 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 197
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 198 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 225
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 27/215 (12%)
Query: 308 FSKNNIIGTGRTGATYIA-MLPGGCFIMIKRLEDSQHSE----KEFLSEINTLGSVRHRN 362
F N++G G Y A + G + IK ++ + + +E+ ++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 363 LVPLLGFCVAKKERLLVYSYLENGT----LYDKLHP-AEHEVMHMDWPLRLRIAIGSARG 417
++ L + LV NG L +++ P +E+E H + G
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI--------ITG 124
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA-RLMNPVDTHLSTFVNGEFGDL 476
+ +LH + I+HR+++ +LL + K++DFGLA +L P + H + G
Sbjct: 125 MLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL-----CGTP 176
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
Y++PE + DV+S G + L+ G P
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 112
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 171
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 172 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 228
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 229 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 256
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 94/247 (38%), Gaps = 32/247 (12%)
Query: 289 FEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGG--CFIM--IKRLEDSQHS 344
F V++MRL F +IG G G + L F M + + E + +
Sbjct: 62 FTSKVKQMRLH-----REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRA 116
Query: 345 EKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL-LVYSYLENG---TLYDKLHPAEHEVM 400
E E + + L + L LV Y G TL K E M
Sbjct: 117 ETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM 176
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG-LARLMN 459
+ + IAI S L + +HR+I IL+D + +L+DFG +LM
Sbjct: 177 ARFYLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLME 227
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVA-----TPKGDVYSFGVVLLELITGERPTHL 514
S V G Y++PE + + P+ D +S GV + E++ GE P +
Sbjct: 228 DGTVQSSVAV----GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283
Query: 515 TNAPESF 521
+ E++
Sbjct: 284 ESLVETY 290
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 114
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 173
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 174 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 230
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 231 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 258
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 89
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 148
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 149 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 205
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 206 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 44/261 (16%)
Query: 282 KGIKVSAFEKSVEKMRLSDLMKATNS-----FSKNNIIGTGRTGATYIAMLPGGCFIMIK 336
+G S E+ E M + KA++S F +IG G + L I
Sbjct: 23 QGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAM 82
Query: 337 RLEDSQHSEKEFLSE---INTLGSVRH-----RNLVPLLGF--CVAKKERLL-VYSYLEN 385
R+ +KE +++ I+ + + +H N L+G C + RL V Y+
Sbjct: 83 RV-----VKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 137
Query: 386 GTLYDKLH-----PAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCIL 440
G L + P EH + + + L +LH II+R++ +L
Sbjct: 138 GDLMFHMQRQRKLPEEHARFY---------SAEISLALNYLHERG---IIYRDLKLDNVL 185
Query: 441 LDGDFEPKLSDFGLARL-MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFG 499
LD + KL+D+G+ + + P DT STF G Y+APE R D ++ G
Sbjct: 186 LDSEGHIKLTDYGMCKEGLRPGDT-TSTFC----GTPNYIAPEILRGEDYGFSVDWWALG 240
Query: 500 VVLLELITGERPTHLTNAPES 520
V++ E++ G P + + ++
Sbjct: 241 VLMFEMMAGRSPFDIVGSSDN 261
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGLAR H + G
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVAT 214
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y T+ D++S G ++ EL+TG
Sbjct: 215 RWYRAPEIMLNWMHYNMTV------DIWSVGCIMAELLTG 248
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLE--DSQHSEKEFLSEINTLGSVRHR 361
++ F +++G G G A P G + IK++E D L EI L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421
N++ + Y+ + LH M D ++ I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
H + +IHR++ +L++ + + K+ DFGLAR+++ S + G VA
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 482 EY---PRTLVATPK----GDVYSFGVVLLEL 505
+ P ++ + K DV+S G +L EL
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 155
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 214
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 215 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 271
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 272 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 299
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR S + E Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-----TSFMMTPEVVTRYYRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 32/237 (13%)
Query: 301 LMKATNSFSKNNIIGTGRTG-ATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR 359
+M ++ + IG+G G A + + +K +E + ++ EI S+R
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR--- 416
H N+V + +V Y G L++++ A R + AR
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFF 121
Query: 417 -----GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS--DFGLARLMNPVDTHLSTFV 469
G+++ H ++ HR++ + LLDG P+L FG ++ + L +
Sbjct: 122 QQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQP 173
Query: 470 NGEFGDLGYVAPEYPRTLVATPK-GDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
G Y+APE K DV+S GV L ++ G P P++F+ ++
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKR-LEDSQHSEKEFLSEINTLGSVRHRNLV 364
S++ +IG G G Y A L G + IK+ L+D + +E + + + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 365 PLLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
L F + E+ LV Y+ H + + ++L + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GD 475
A++H I HR+I + +LLD D KL DFG A+ + + ++S + + +
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
Query: 331 CFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLL----GFCVAKKERLLVYSYLENG 386
C + ++L S+ + F E L ++H N+V KK +LV +G
Sbjct: 57 CELQDRKLTKSER--QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSG 114
Query: 387 TL--YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD 444
TL Y K + W ++ +GL +LH P IIHR++ I + G
Sbjct: 115 TLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHTR-TPPIIHRDLKCDNIFITGP 167
Query: 445 F-EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE-YPRTLVATPKGDVYSFGVVL 502
K+ D GLA L ++F G + APE Y + DVY+FG
Sbjct: 168 TGSVKIGDLGLATLKR------ASFAKAVIGTPEFXAPEXYEEKYDESV--DVYAFGXCX 219
Query: 503 LELITGERP-THLTNAPESFK 522
LE T E P + NA + ++
Sbjct: 220 LEXATSEYPYSECQNAAQIYR 240
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 19/231 (8%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ ++E L + RH L L
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAK--DEVAHT----VTESRVLQNTRHPFLTAL 70
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V + I SA L +LH
Sbjct: 71 -KYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSA--LEYLH--- 122
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ +++R+I + ++LD D K++DFGL + + TF G Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC----GTPEYLAPEVLE 178
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
D + GVV+ E++ G P + + F+ L+E I T S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 229
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGL 418
H N+V L + LV L G L++++ +H + +R ++ S
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS---- 120
Query: 419 AWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMNPVDTHLST--FVNGEF 473
H + ++HR++ + +L + + E K+ DFG ARL P + L T F
Sbjct: 121 ----HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFT---- 172
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
L Y APE D++S GV+L +++G+ P
Sbjct: 173 --LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ D+GLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 31/199 (15%)
Query: 324 IAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSY 382
I + GG F E+ Q + L E++ L V H N++ L LV+
Sbjct: 37 IDVTGGGSF----SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 92
Query: 383 LENGTLYD----KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438
++ G L+D K+ +E E + +R + + A H N I+HR++ +
Sbjct: 93 MKKGELFDYLTEKVTLSEKETRKI---MRALLEVICAL------HKLN--IVHRDLKPEN 141
Query: 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVAT------PK 492
ILLD D KL+DFG + ++P + + G Y+APE + +
Sbjct: 142 ILLDDDMNIKLTDFGFSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYGKE 196
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV++ L+ G P
Sbjct: 197 VDMWSTGVIMYTLLAGSPP 215
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ FG +VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPAFVAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 32/237 (13%)
Query: 301 LMKATNSFSKNNIIGTGRTG-ATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR 359
+M ++ + IG+G G A + + +K +E + ++ EI S+R
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 360 HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR--- 416
H N+V + +V Y G L++++ A R + AR
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFF 121
Query: 417 -----GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS--DFGLARLMNPVDTHLSTFV 469
G+++ H ++ HR++ + LLDG P+L FG ++ + L +
Sbjct: 122 QQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQP 173
Query: 470 NGEFGDLGYVAPEYPRTLVATPK-GDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525
G Y+APE K DV+S GV L ++ G P P++F+ ++
Sbjct: 174 KDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVA 480
L H N +++R++ ILLD ++SD GLA + H S G GY+A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV------GTHGYMA 358
Query: 481 PEYPRTLVA-TPKGDVYSFGVVLLELITGERP 511
PE + VA D +S G +L +L+ G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 300 DLMKATNSFSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQHSE------KEFLSEI 352
D+ + K + +G G+ Y A + IK+++ SE + L EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 353 NTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRL---- 408
L + H N++ LL K LV+ ++E + EV+ D L L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET----------DLEVIIKDNSLVLTPSH 113
Query: 409 --RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456
+ + +GL +LH + I+HR++ +LLD + KL+DFGLA+
Sbjct: 114 IKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVA 480
L H N +++R++ ILLD ++SD GLA + H S G GY+A
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV------GTHGYMA 357
Query: 481 PEYPRTLVA-TPKGDVYSFGVVLLELITGERP 511
PE + VA D +S G +L +L+ G P
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKE-----FLSEINTLGSV 358
+ + K IG G G + A G + +K++ +EKE L EI L +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLL 74
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR-- 416
+H N+V L+ C K Y+ + G++Y EH++ + + ++ + +
Sbjct: 75 KHENVVNLIEICRTKAS---PYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 417 ------GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
GL ++H N +I+HR++ + +L+ D KL+DFGLAR +
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 471 GEFGDLGYVAPEYPRTLVAT----PKGDVYSFGVVLLELIT 507
L Y PE L+ P D++ G ++ E+ T
Sbjct: 188 NRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 19/231 (8%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ ++E L + RH L L
Sbjct: 20 TFGKVILVREKATGRYYAMKILRKEVIIAK--DEVAHT----VTESRVLQNTRHPFLTAL 73
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V + I SA L +LH
Sbjct: 74 -KYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSA--LEYLH--- 125
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ +++R+I + ++LD D K++DFGL + + TF G Y+APE
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC----GTPEYLAPEVLE 181
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
D + GVV+ E++ G P + + F+ L+E I T S
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 232
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVA 480
L H N +++R++ ILLD ++SD GLA + H S G GY+A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV------GTHGYMA 358
Query: 481 PEYPRTLVA-TPKGDVYSFGVVLLELITGERP 511
PE + VA D +S G +L +L+ G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 421 LHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVA 480
L H N +++R++ ILLD ++SD GLA + H S G GY+A
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV------GTHGYMA 358
Query: 481 PEYPRTLVA-TPKGDVYSFGVVLLELITGERP 511
PE + VA D +S G +L +L+ G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHE-RMSYLLYQMLVGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 31/199 (15%)
Query: 324 IAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSY 382
I + GG F E+ Q + L E++ L V H N++ L LV+
Sbjct: 50 IDVTGGGSF----SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 383 LENGTLYD----KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438
++ G L+D K+ +E E + +R + + A H N I+HR++ +
Sbjct: 106 MKKGELFDYLTEKVTLSEKETRKI---MRALLEVICAL------HKLN--IVHRDLKPEN 154
Query: 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVAT------PK 492
ILLD D KL+DFG + ++P + + G Y+APE + +
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV++ L+ G P
Sbjct: 210 VDMWSTGVIMYTLLAGSPP 228
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHE-RMSYLLYQMLCGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 19/231 (8%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ ++E L + RH L L
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAK--DEVAHT----VTESRVLQNTRHPFLTAL 70
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V + I SA L +LH
Sbjct: 71 -KYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSA--LEYLH--- 122
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ +++R+I + ++LD D K++DFGL + + TF G Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC----GTPEYLAPEVLE 178
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
D + GVV+ E++ G P + + F+ L+E I T S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 229
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ + + F EF VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHE-RMSYLLYQMLCGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHE-RMSYLLYQMLCGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKE-----FLSEINTLGSV 358
+ + K IG G G + A G + +K++ +EKE L EI L +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLL 74
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR-- 416
+H N+V L+ C K Y+ + G++Y EH++ + + ++ + +
Sbjct: 75 KHENVVNLIEICRTKAS---PYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 417 ------GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
GL ++H N +I+HR++ + +L+ D KL+DFGLAR +
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 471 GEFGDLGYVAPEYPRTLVAT----PKGDVYSFGVVLLELIT 507
L Y PE L+ P D++ G ++ E+ T
Sbjct: 188 NRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKE-----FLSEINTLGSV 358
+ + K IG G G + A G + +K++ +EKE L EI L +
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLL 73
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR-- 416
+H N+V L+ C K Y+ + G++Y EH++ + + ++ + +
Sbjct: 74 KHENVVNLIEICRTKAS---PYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 417 ------GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
GL ++H N +I+HR++ + +L+ D KL+DFGLAR +
Sbjct: 130 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 471 GEFGDLGYVAPEYPRTLVAT----PKGDVYSFGVVLLELIT 507
L Y PE L+ P D++ G ++ E+ T
Sbjct: 187 NRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 89
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 90 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 145
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 200
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKG 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 430 IHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-- 487
+HR+I +LLD + +L+DFG MN T S+ G Y++PE + +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VGTPDYISPEILQAMED 269
Query: 488 ---VATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521
P+ D +S GV + E++ GE P + + E++
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 430 IHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-- 487
+HR+I +LLD + +L+DFG MN T S+ G Y++PE + +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VGTPDYISPEILQAMED 253
Query: 488 ---VATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521
P+ D +S GV + E++ GE P + + E++
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 90
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 91 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 146
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR + FV + Y APE
Sbjct: 147 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMVPFVVTRY----YRAPEVILG 201
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKG 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 27/198 (13%)
Query: 349 LSEINTLGSVRHRNLVPLLGFC--VAKKERLLVYSYLENGTLYDKLHPAE--HEVMHMDW 404
+ E L + H+N+V L + ++L+ + G+LY L + + ++
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 405 PLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL----DGDFEPKLSDFGLARLMNP 460
+ LR +G G+ L N I+HRNI I+ DG KL+DFG AR +
Sbjct: 115 LIVLRDVVG---GMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
Query: 461 VDTHLSTFVNGEFGDLGYVAPE-YPRTLVATPKG-------DVYSFGVVLLELITGERPT 512
+ +S +G Y+ P+ Y R ++ D++S GV TG P
Sbjct: 169 DEQFVSL-----YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Query: 513 HLTNAPESFKGSLVEWIT 530
P K + + IT
Sbjct: 224 RPFEGPRRNKEVMYKIIT 241
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DFGL R H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 34 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 89 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 141
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ FG +VAPE +
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLGLE 196
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 197 ADMWSIGVITYILLSGASP 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ + + F EF VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ FG +VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ FG +VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELITG 508
+ D++S G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ + + F EF VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ FG +VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ + + F EF VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ + + F EF VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 34 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 89 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 141
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ FG +VAPE +
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLGLE 196
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 197 ADMWSIGVITYILLSGASP 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ + + F EF VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ + + F EF VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRL---EDSQHSEKEFLSEINTLGSVRHR 361
+ K IG G G + A + +KR+ +D + L EI L ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 362 NLVPLLGFCVAKKERLLVYSYLENG--TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
N+V L + K+ LV+ + + +D + +D + +GL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN------GDLDPEIVKSFLFQLLKGLG 115
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN-PVDTHLSTFVNGEFGDLGY 478
+ H ++HR++ + +L++ + E KL++FGLAR PV + + V L Y
Sbjct: 116 FCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVT-----LWY 167
Query: 479 VAPE--YPRTLVATPKGDVYSFGVVLLELITGERP 511
P+ + L +T D++S G + EL RP
Sbjct: 168 RPPDVLFGAKLYST-SIDMWSAGCIFAELANAGRP 201
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHRNLVPLLG- 368
+G+G G+ A+ G + IK+L SE K E+ L ++H N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 369 FCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLR--LRIAIGSARGLAWLHHNCN 426
F A R YL + L ++M M++ + +GL ++H +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQ----KIMGMEFSEEKIQYLVYQMLKGLKYIH---S 162
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE---- 482
++HR++ + ++ D E K+ DFGLAR H + G Y APE
Sbjct: 163 AGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILS 215
Query: 483 ---YPRTLVATPKGDVYSFGVVLLELITGE 509
Y +T+ D++S G ++ E++TG+
Sbjct: 216 WMHYNQTV------DIWSVGCIMAEMLTGK 239
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E ++ DFGLAR D ++ +V +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRW-- 193
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITGE 509
Y APE Y +T+ D++S G ++ EL+ G+
Sbjct: 194 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGK 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E ++ DFGLAR D ++ +V +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRW-- 193
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITGE 509
Y APE Y +T+ D++S G ++ EL+ G+
Sbjct: 194 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGK 226
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHRNLVPLLG- 368
+G+G G+ A+ G + IK+L SE K E+ L ++H N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 369 FCVAKKERLLVYSYLENGTLYDKLHP------AEHEVMHMDWPLRLRIAIGSARGLAWLH 422
F A R YL + L +E ++ ++ + + +GL ++H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM--------LKGLKYIH 143
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ ++HR++ + ++ D E K+ DFGLAR H + G Y APE
Sbjct: 144 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPE 193
Query: 483 -------YPRTLVATPKGDVYSFGVVLLELITGE 509
Y +T+ D++S G ++ E++TG+
Sbjct: 194 VILSWMHYNQTV------DIWSVGCIMAEMLTGK 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E ++ DFGLAR D ++ +V +
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRW-- 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITGE 509
Y APE Y +T+ D++S G ++ EL+ G+
Sbjct: 186 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGK 218
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV--YSYLENGTLYDKLHPAEHEVMH 401
++++F+SE + ++ H ++V L+G + +++ Y Y E G H E
Sbjct: 56 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG------HYLERNKNS 109
Query: 402 MDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ + ++ + +A+L NC +HR+I+ + IL+ KL DFGL+R +
Sbjct: 110 LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 165
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D + ++ + +++PE T DV+ F V + E+++ G++P
Sbjct: 166 EDYYKASVTRLP---IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376
TG Y A FI +R + S+ S ++ E++ L ++H N++ L K +
Sbjct: 35 TGLQYAAK-----FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436
+L+ + G L+D L AE E + + I G+ +LH + +I H ++
Sbjct: 90 ILIGELVAGGELFDFL--AEKESLTEEEATEFLKQI--LNGVYYLH---SLQIAHFDLKP 142
Query: 437 KCILLDGDFEP----KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK 492
+ I+L P K+ DFGLA ++ + + F EF VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF-----VAPEIVNYEPLGLE 197
Query: 493 GDVYSFGVVLLELITGERP 511
D++S GV+ L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474
RGL ++H + ++HR++ + ++ D K+ DFGLAR+M+P +H G
Sbjct: 131 RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH-----KGHLS 182
Query: 475 DLGYVAPEY--PRTLVA----TPKGDVYSFGVVLLELITGE 509
+ G V Y PR L++ T D+++ G + E++TG+
Sbjct: 183 E-GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV--YSYLENGTLYDKLHPAEHEVMH 401
++++F+SE + ++ H ++V L+G + +++ Y Y E G H E
Sbjct: 52 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG------HYLERNKNS 105
Query: 402 MDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ + ++ + +A+L NC +HR+I+ + IL+ KL DFGL+R +
Sbjct: 106 LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 161
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D + ++ + +++PE T DV+ F V + E+++ G++P
Sbjct: 162 EDYYKASVTRLP---IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV--YSYLENGTLYDKLHPAEHEVMH 401
++++F+SE + ++ H ++V L+G + +++ Y Y E G H E
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG------HYLERNKNS 121
Query: 402 MDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+ + ++ + +A+L NC +HR+I+ + IL+ KL DFGL+R +
Sbjct: 122 LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 177
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511
D + ++ + +++PE T DV+ F V + E+++ G++P
Sbjct: 178 EDYYKASVTRLP---IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ FGLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ ++E L + RH L L
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAK--DEVAHT----VTESRVLQNTRHPFLTAL 70
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V + I SA L +LH
Sbjct: 71 -KYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSA--LEYLH--- 122
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ +++R+I + ++LD D K++DFGL + + F G Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC----GTPEYLAPEVLE 178
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
D + GVV+ E++ G P + + F+ L+E I T S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ D GLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ ++E L + RH L L
Sbjct: 22 TFGKVILVREKATGRYYAMKILRKEVIIAK--DEVAHT----VTESRVLQNTRHPFLTAL 75
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V + I SA L +LH
Sbjct: 76 -KYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSA--LEYLH--- 127
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ +++R+I + ++LD D K++DFGL + + F G Y+APE
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC----GTPEYLAPEVLE 183
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
D + GVV+ E++ G P + + F+ L+E I T S
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVP 365
S++ +IG G G Y A L G + IK++ + + E+ + + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 366 LLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
L F + E+ LV Y+ H + + ++L + R LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLA 136
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GDL 476
++H I HR+I + +LLD D KL DFG A+ + + ++S + + +L
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
+ A +Y ++ DV+S G VL EL+ G+
Sbjct: 194 IFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVP 365
S++ +IG G G Y A L G + IK++ + + E+ + + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 366 LLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
L F + E+ LV Y+ H + + ++L + R LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLA 136
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GDL 476
++H I HR+I + +LLD D KL DFG A+ + + ++S + + +L
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
+ A +Y ++ DV+S G VL EL+ G+
Sbjct: 194 IFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ DF LAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVP 365
S++ +IG G G Y A L G + IK++ + + E+ + + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 366 LLGFCVAKKERL------LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
L F + E+ LV Y+ H + + ++L + R LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLA 136
Query: 420 WLHHNCNPRIIHRNISSKCILLDGDFEP-KLSDFGLARLMNPVDTHLSTFVNGEF--GDL 476
++H I HR+I + +LLD D KL DFG A+ + + ++S + + +L
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509
+ A +Y ++ DV+S G VL EL+ G+
Sbjct: 194 IFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAE-HEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 89 LNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHE-RMSYLLYQMLCGIKHLH 143
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 198
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ ++E L + RH L L
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAK--DEVAHT----VTESRVLQNTRHPFLTAL 70
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V + I SA L +LH
Sbjct: 71 -KYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSA--LEYLH--- 122
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ +++R+I + ++LD D K++DFGL + + F G Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC----GTPEYLAPEVLE 178
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
D + GVV+ E++ G P + + F+ L+E I T S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 229
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ D GLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPL 366
+F K ++ TG Y + I+ K ++ H+ ++E L + RH L L
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAK--DEVAHT----VTESRVLQNTRHPFLTAL 70
Query: 367 LGFCVAKKERL-LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
+ +RL V Y G L+ H + V + I SA L +LH
Sbjct: 71 -KYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSA--LEYLH--- 122
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ +++R+I + ++LD D K++DFGL + + F G Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC----GTPEYLAPEVLE 178
Query: 486 TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536
D + GVV+ E++ G P + + F+ L+E I T S
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 229
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 27/198 (13%)
Query: 349 LSEINTLGSVRHRNLVPLLGFC--VAKKERLLVYSYLENGTLYDKLHPAE--HEVMHMDW 404
+ E L + H+N+V L + ++L+ + G+LY L + + ++
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 405 PLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL----DGDFEPKLSDFGLARLMNP 460
+ LR +G G+ L N I+HRNI I+ DG KL+DFG AR +
Sbjct: 115 LIVLRDVVG---GMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
Query: 461 VDTHLSTFVNGEFGDLGYVAPE-YPRTLVATPKG-------DVYSFGVVLLELITGERPT 512
+ + +G Y+ P+ Y R ++ D++S GV TG P
Sbjct: 169 DEQFVXL-----YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Query: 513 HLTNAPESFKGSLVEWIT 530
P K + + IT
Sbjct: 224 RPFEGPRRNKEVMYKIIT 241
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 431 HRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVAT 490
HR++ + IL+ D L DFG+A D L+ N G L Y APE AT
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGN-TVGTLYYXAPERFSESHAT 213
Query: 491 PKGDVYSFGVVLLELITGERP 511
+ D+Y+ VL E +TG P
Sbjct: 214 YRADIYALTCVLYECLTGSPP 234
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 328 PGGCFIMIKR--LEDSQHSEKEFLS-EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384
P G ++ ++R LE + FL E++ H N+VP +A E +V S++
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD 444
G+ D + H + M+ I G + L ++HH +HR++ + IL+ D
Sbjct: 110 YGSAKDLI--CTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVD 164
Query: 445 FEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEY---------PRTLVATPKG-- 493
+ LS + ++LS +G+ + + P+Y P L +G
Sbjct: 165 GKVYLSG---------LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYD 215
Query: 494 ---DVYSFGVVLLELITGERP 511
D+YS G+ EL G P
Sbjct: 216 AKSDIYSVGITACELANGHVP 236
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL-MNPVDTHLSTFVNGEFGD 475
L +LH II+R++ +LLD + KL+D+G+ + + P DT S F G
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFC----GT 184
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
Y+APE R D ++ GV++ E++ G P + + ++
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 229
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 328 PGGCFIMIKR--LEDSQHSEKEFLS-EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384
P G ++ ++R LE + FL E++ H N+VP +A E +V S++
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD 444
G+ D + H + M+ I G + L ++HH +HR++ + IL+ D
Sbjct: 94 YGSAKDLI--CTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVD 148
Query: 445 FEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEY---------PRTLVATPKG-- 493
+ LS + ++LS +G+ + + P+Y P L +G
Sbjct: 149 GKVYLSG---------LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYD 199
Query: 494 ---DVYSFGVVLLELITGERP 511
D+YS G+ EL G P
Sbjct: 200 AKSDIYSVGITACELANGHVP 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKE-----FLSEINTLGSV 358
+ + K IG G G + A G + +K++ +EKE L EI L +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLL 74
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR-- 416
+H N+V L+ C K Y+ + ++Y EH++ + + ++ + +
Sbjct: 75 KHENVVNLIEICRTKAS---PYNRCK-ASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 417 ------GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470
GL ++H N +I+HR++ + +L+ D KL+DFGLAR +
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 471 GEFGDLGYVAPEYPRTLVAT----PKGDVYSFGVVLLELIT 507
L Y PE L+ P D++ G ++ E+ T
Sbjct: 188 NRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 272 NKWAKRIKGTKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGC 331
N++ K +K +G+++ A + V K+ +F + ++ + Y AM
Sbjct: 58 NRYEKIVKKIRGLQMKAEDYDVVKV------IGRGAFGEVQLVRHKASQKVY-AMKLLSK 110
Query: 332 FIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL--VYSYLENGTLY 389
F MIKR S+ F E + + + V L FC + ++ L V Y+ G L
Sbjct: 111 FEMIKR------SDSAFFWEERDIMAFANSPWVVQL-FCAFQDDKYLYMVMEYMPGGDLV 163
Query: 390 DKLHPAE-HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPK 448
+ + + E + + +A+ + + +IHR++ +LLD K
Sbjct: 164 NLMSNYDVPEKWAKFYTAEVVLALDAIHSMG---------LIHRDVKPDNMLLDKHGHLK 214
Query: 449 LSDFGLARLMNPVD-THLSTFVNGEFGDLGYVAPEYPRTLVAT----PKGDVYSFGVVLL 503
L+DFG M+ H T V G Y++PE ++ + D +S GV L
Sbjct: 215 LADFGTCMKMDETGMVHCDTAV----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 270
Query: 504 ELITGERPTH 513
E++ G+ P +
Sbjct: 271 EMLVGDTPFY 280
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475
RGL ++H + IIHR++ + ++ D E K+ D GLAR H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR-------HTDDEMTGYVAT 185
Query: 476 LGYVAPE-------YPRTLVATPKGDVYSFGVVLLELITG 508
Y APE Y +T+ D++S G ++ EL+TG
Sbjct: 186 RWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTG 219
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 418 LAWLHHNCNPRIIHRNISSKCILLDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGEFG 474
+A+ H N I+HRN+ + +LL + KL+DFGLA ++ + S +G G
Sbjct: 141 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHGFAG 192
Query: 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
GY++PE + + D+++ GV+L L+ G P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR S + E Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-----TSFMMEPEVVTRYYRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 127 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 181
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 236
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAE-HEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 89 LNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHE-RMSYLLYQMLXGIKHLH 143
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 198
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 89 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 143
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 198
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAE-HEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 89 LNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHE-RMSYLLYQMLXGIKHLH 143
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 198
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL-MNPVDTHLSTFVNGEFGD 475
L +LH II+R++ +LLD + KL+D+G+ + + P DT S F G
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFC----GT 169
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
Y+APE R D ++ GV++ E++ G P + + ++
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 214
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAE-HEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 82 LNVFTPQK----TLEEFQDVYLVMELMDANLXQVIQMELDHE-RMSYLLYQMLXGIKHLH 136
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 191
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRI 410
EI+ L RHRN++ L + +E ++++ ++ ++++++ + E+ + +
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREI---VSY 107
Query: 411 AIGSARGLAWLH-HNCNPRIIHRNISSKCILLDGDFEP--KLSDFGLARLMNPVDTHLST 467
L +LH HN I H +I + I+ K+ +FG AR + P D
Sbjct: 108 VHQVCEALQFLHSHN----IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163
Query: 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
F E Y APE + V + D++S G ++ L++G P
Sbjct: 164 FTAPE-----YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL-MNPVDTHLSTFVNGEFGD 475
L +LH II+R++ +LLD + KL+D+G+ + + P DT S F G
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFC----GT 173
Query: 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520
Y+APE R D ++ GV++ E++ G P + + ++
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 27/177 (15%)
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468
+IA+ + L LH + +IHR++ +L++ + K+ DFG++ + VD+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTI 212
Query: 469 VNGEFGDLGYVAPEYPRTLV----ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS 524
+ G Y+APE + + K D++S G+ ++EL P
Sbjct: 213 ---DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD----------- 258
Query: 525 LVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581
W T + L + F E F+ C+ KER T E+ Q
Sbjct: 259 --SWGTPFQQLKQVVEEPSPQLPADKFSAE---FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 127 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 181
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 236
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 416 RGLAWLHHNCNPRIIHRNISSKCILLDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGE 472
+A+ H N I+HRN+ + +LL + KL+DFGLA ++ + S +G
Sbjct: 116 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHGF 167
Query: 473 FGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G GY++PE + + D+++ GV+L L+ G P
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGEF 473
+A+ H N I+HRN+ + +LL + KL+DFGLA ++ + S +G
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHGFA 168
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G GY++PE + + D+++ GV+L L+ G P
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 89 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 143
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 198
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 90 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 144
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 199
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 87
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 88 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 142
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 197
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 198 GMGYKENVDIWSVGCIMGEMV 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 90 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 144
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 199
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGEF 473
+A+ H N I+HRN+ + +LL + KL+DFGLA ++ + S +G
Sbjct: 116 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHGFA 167
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G GY++PE + + D+++ GV+L L+ G P
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 89 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 143
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 198
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 83 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 137
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 192
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 83 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 137
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 192
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNC 425
L +K ++ L +L A +V+ M+ R++ + L + H
Sbjct: 82 LNVFTPQK----TLEEFQDVYLVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLH 136
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485
+ IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVIL 191
Query: 486 TLVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 89 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 144
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR S + E Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-----TSFMMEPEVVTRYYRAPEVILG 199
Query: 487 LVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 200 MGYKENVDLWSVGCIMGEMV 219
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 129 RLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVAS 188
+ ++T L L+ NSL+ E+P+ + N + L VL L++NR T +P +LG ++K F
Sbjct: 245 KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFD 302
Query: 189 NLLTGPVPSFANV 201
N++T F N+
Sbjct: 303 NMVTTLPWEFGNL 315
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 36/222 (16%)
Query: 314 IGTGRTGATYIAM-LPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVR-HRNLVPLL 367
+G G G + ++ G + +K++ ++S +++ F EI L + H N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 368 GFCVAKKER--LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC 425
A +R LV+ Y+E L+ + E +H + + I + + +LH
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-LHAVIRANILEPVHKQYVVYQLIKV-----IKYLHSGG 129
Query: 426 NPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV-----DTHLSTFVNGE-FGD---- 475
++HR++ ILL+ + K++DFGL+R + + LS N E F D
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 476 -LGYVAPEY---PRTLVATPKG----DVYSFGVVLLELITGE 509
YVA + P L+ + K D++S G +L E++ G+
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 82
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 83 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 138
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 193
Query: 487 LVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 194 MGYKENVDLWSVGCIMGEMV 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 314 IGTGRTG---ATYIAMLPGGCFIMIKRL----EDSQHSEKEFLSEINTLGSVRHRNLVPL 366
IG+G G A Y A+L + IK+L ++ H+++ + E+ + V H+N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 93
Query: 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN 426
L +K + + + + + + +V+ M+ R++ + L + H +
Sbjct: 94 LNVFTPQKS---LEEFQDVYIVMELMDANLCQVIQMELDHE-RMSYLLYQMLCGIKHLHS 149
Query: 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT 486
IIHR++ I++ D K+ DFGLAR ++ +V + Y APE
Sbjct: 150 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVILG 204
Query: 487 LVATPKGDVYSFGVVLLELI 506
+ D++S G ++ E++
Sbjct: 205 MGYKENVDLWSVGCIMGEMV 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 27/223 (12%)
Query: 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKR--LEDSQHSEKEFLSEINTLGSVRHRNL 363
F +G G G + A C IKR L + + + ++ + E+ L + H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 364 VPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDW------------PLRLRIA 411
V + K + LY ++ E + DW + L I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK-DWMNGRCTIEERERSVCLHIF 124
Query: 412 IGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV-- 469
+ A + +LH ++HR++ I D K+ DFGL M+ + +
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 470 ------NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
G+ G Y++PE + K D++S G++L EL+
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467
L I I A + +LH ++HR++ I D K+ DFGL M+ + +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 468 FV--------NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506
G+ G Y++PE + K D++S G++L EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 26/237 (10%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH-RNLVPLLGFCVAKKERL 377
TG Y A +K+ Q E L EI L + ++ L E +
Sbjct: 53 TGQEYAAKF-------LKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII 105
Query: 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSK 437
L+ Y G ++ P E++ + +RL I G+ +LH N I+H ++ +
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQI--LEGVYYLHQN---NIVHLDLKPQ 160
Query: 438 CILLDGDF---EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGD 494
ILL + + K+ DFG++R + + + G Y+APE T D
Sbjct: 161 NILLSSIYPLGDIKIVDFGMSRKIGH-----ACELREIMGTPEYLAPEILNYDPITTATD 215
Query: 495 VYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGF 551
+++ G++ L+T P + E++ I+ +N + S ET S L F
Sbjct: 216 MWNIGIIAYMLLTHTSPFVGEDNQETYLN-----ISQVNVDYSEETFSSVSQLATDF 267
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
S +E E++ L V H N++ L + + +L+ + G L+D L A+ E + +
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP----KLSDFGLARLMN 459
I G+ +LH +I H ++ + I+L P KL DFGLA +
Sbjct: 116 EATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
FG +VAPE + D++S GV+ L++G P
Sbjct: 171 D-----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
S +E E++ L V H N++ L + + +L+ + G L+D L A+ E + +
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP----KLSDFGLARLMN 459
I G+ +LH +I H ++ + I+L P KL DFGLA +
Sbjct: 116 EATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
FG +VAPE + D++S GV+ L++G P
Sbjct: 171 D-----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
S +E E++ L V H N++ L + + +L+ + G L+D L A+ E + +
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP----KLSDFGLARLMN 459
I G+ +LH +I H ++ + I+L P KL DFGLA +
Sbjct: 116 EATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
FG +VAPE + D++S GV+ L++G P
Sbjct: 171 D-----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
S +E E++ L V H N++ L + + +L+ + G L+D L A+ E + +
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP----KLSDFGLARLMN 459
I G+ +LH +I H ++ + I+L P KL DFGLA +
Sbjct: 116 EATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
FG +VAPE + D++S GV+ L++G P
Sbjct: 171 D-----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCIL 440
+ + GTL + E +D L L + +G+ ++H + ++IHR++ I
Sbjct: 114 EFCDKGTLEQWIEKRRGE--KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIF 168
Query: 441 LDGDFEPKLSDFGL-ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFG 499
L + K+ DFGL L N S G L Y++PE + + D+Y+ G
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSK------GTLRYMSPEQISSQDYGKEVDLYALG 222
Query: 500 VVLLELI 506
++L EL+
Sbjct: 223 LILAELL 229
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMD 403
S +E E++ L V H N++ L + + +L+ + G L+D L A+ E + +
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 404 WPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP----KLSDFGLARLMN 459
I G+ +LH +I H ++ + I+L P KL DFGLA +
Sbjct: 116 EATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
FG +VAPE + D++S GV+ L++G P
Sbjct: 171 D-----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 38/175 (21%)
Query: 351 EINTLGSVRHRNLVPLL------GFCVAKKER----LLVYSYLENGTLYDKLHPAEHEVM 400
EI L V H N++ +L GF E+ L ++++++ HP
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR-------HP------ 125
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
+D PL I + +L IIHR+I + I++ DF KL DFG A +
Sbjct: 126 RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVAT----PKGDVYSFGVVLLELITGERP 511
TF G + Y APE L+ P+ +++S GV L L+ E P
Sbjct: 183 -GKLFYTFC----GTIEYCAPE---VLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 29/178 (16%)
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA-RLMNPVDTHLST 467
+IA+ + L LH + +IHR++ +L++ + K+ DFG++ L++ V +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 468 FVNGEFGDLGYVAPEYPRTLV----ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG 523
G Y+APE + + K D++S G+ ++EL P
Sbjct: 171 ------GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD---------- 214
Query: 524 SLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581
W T + L + F E F+ C+ KER T E+ Q
Sbjct: 215 ---SWGTPFQQLKQVVEEPSPQLPADKFSAE---FVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 225
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 225
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 130 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 181
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 210
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 132 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 183
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 127 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 178
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 210
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 131 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 182
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 210
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 211
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 211
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 211
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 159 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 210
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 132 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 183
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 160 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 211
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 131 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 182
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVP 365
+FS+ ++ +TG Y AM + M+KR E S E+ ++ G R +
Sbjct: 72 GAFSEVAVVKMKQTGQVY-AMKIMNKWDMLKRGEVSCFREER---DVLVNGD---RRWIT 124
Query: 366 LLGFCVAKKERL-LVYSYLENGTLYDKLH------PAEHEVMHMDWPLRLRIAIGSARGL 418
L F + L LV Y G L L PAE ++ + +AI S L
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYL---AEIVMAIDSVHRL 181
Query: 419 AWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478
+ +HR+I ILLD +L+DFG + L D + + V G Y
Sbjct: 182 GY---------VHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVA--VGTPDY 229
Query: 479 VAPEYPRTL-------VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528
++PE + + P+ D ++ GV E+ G+ P + + E++ G +V +
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY-GKIVHY 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 127 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 178
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 154 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 205
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 132 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 183
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 174 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 225
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 146 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 197
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 179 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 230
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 146 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 197
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 147 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 198
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 147 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 198
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 147 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 198
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 21/196 (10%)
Query: 319 TGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378
TG Y A + I K+L H + E + I L ++H N+V L + L
Sbjct: 28 TGHEYAAKI-----INTKKLSARDHQKLEREARICRL--LKHSNIVRLHDSISEEGFHYL 80
Query: 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438
V+ + G L++ +++ ++ + + L + H ++HR++ +
Sbjct: 81 VFDLVTGGELFE-------DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPEN 133
Query: 439 ILLDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDV 495
+LL + KL+DFGLA + F G GY++PE R D+
Sbjct: 134 LLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA----GTPGYLSPEVLRKEAYGKPVDI 189
Query: 496 YSFGVVLLELITGERP 511
++ GV+L L+ G P
Sbjct: 190 WACGVILYILLVGYPP 205
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAP 481
HNC ++HR+I + IL+D E KL DFG L+ DT + F G Y P
Sbjct: 166 HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD----GTRVYSPP 217
Query: 482 EYPRTLVATPK-GDVYSFGVVLLELITGERP 511
E+ R + V+S G++L +++ G+ P
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 16/170 (9%)
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
+E E++ L V H N++ L + + +L+ + G L+D L A+ E + +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP----KLSDFGLARLMNPV 461
I G+ +LH +I H ++ + I+L P KL DFGLA +
Sbjct: 118 TSFIKQILD--GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED- 171
Query: 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
FG +VAPE + D++S GV+ L++G P
Sbjct: 172 ----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 44/248 (17%)
Query: 286 VSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYI----------AMLPGGCFIMI 335
+S ++ ++ K+R DL + +IG G G + AM F MI
Sbjct: 51 LSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 108
Query: 336 KRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL-LVYSYLENGTLYDKLHP 394
KR S+ F E + + + V L + L +V Y+ G L + +
Sbjct: 109 KR------SDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 162
Query: 395 AE-HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453
+ E + + +A+ + + IHR++ +LLD KL+DFG
Sbjct: 163 YDVPEKWARFYTAEVVLALDAIHSMG---------FIHRDVKPDNMLLDKSGHLKLADFG 213
Query: 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVY--------SFGVVLLEL 505
MN + G Y++PE ++ + GD Y S GV L E+
Sbjct: 214 TCMKMN---KEGMVRCDTAVGTPDYISPE----VLKSQGGDGYYGRECDWWSVGVFLYEM 266
Query: 506 ITGERPTH 513
+ G+ P +
Sbjct: 267 LVGDTPFY 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 44/248 (17%)
Query: 286 VSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYI----------AMLPGGCFIMI 335
+S ++ ++ K+R DL + +IG G G + AM F MI
Sbjct: 56 LSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 113
Query: 336 KRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL-LVYSYLENGTLYDKLHP 394
KR S+ F E + + + V L + L +V Y+ G L + +
Sbjct: 114 KR------SDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 167
Query: 395 AE-HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453
+ E + + +A+ + + IHR++ +LLD KL+DFG
Sbjct: 168 YDVPEKWARFYTAEVVLALDAIHSMG---------FIHRDVKPDNMLLDKSGHLKLADFG 218
Query: 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVY--------SFGVVLLEL 505
MN + G Y++PE ++ + GD Y S GV L E+
Sbjct: 219 TCMKMN---KEGMVRCDTAVGTPDYISPE----VLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 506 ITGERPTH 513
+ G+ P +
Sbjct: 272 LVGDTPFY 279
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 429 IIHRNIS-SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
I+H ++ + +++DG KL DFG+A M P T S + + G + Y+ PE + +
Sbjct: 129 IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDM 184
Query: 488 VATPKG-----------DVYSFGVVLLELITGERP 511
++ + DV+S G +L + G+ P
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 44/248 (17%)
Query: 286 VSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYI----------AMLPGGCFIMI 335
+S ++ ++ K+R DL + +IG G G + AM F MI
Sbjct: 56 LSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 113
Query: 336 KRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL-LVYSYLENGTLYDKLHP 394
KR S+ F E + + + V L + L +V Y+ G L + +
Sbjct: 114 KR------SDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 167
Query: 395 AE-HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453
+ E + + +A+ + + IHR++ +LLD KL+DFG
Sbjct: 168 YDVPEKWARFYTAEVVLALDAIHSMG---------FIHRDVKPDNMLLDKSGHLKLADFG 218
Query: 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVY--------SFGVVLLEL 505
MN + G Y++PE ++ + GD Y S GV L E+
Sbjct: 219 TCMKMN---KEGMVRCDTAVGTPDYISPE----VLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 506 ITGERPTH 513
+ G+ P +
Sbjct: 272 LVGDTPFY 279
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 429 IIHRNIS-SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
I+H ++ + +++DG KL DFG+A M P T S + + G + Y+ PE + +
Sbjct: 148 IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDM 203
Query: 488 VATPKG-----------DVYSFGVVLLELITGERP 511
++ + DV+S G +L + G+ P
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 415 ARGLAW-----LHHNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTF 468
AR W + H N ++HR+I + IL+D E KL DFG L+ DT + F
Sbjct: 112 ARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF 169
Query: 469 VNGEFGDLGYVAPEYPRTLVATPK-GDVYSFGVVLLELITGERP 511
G Y PE+ R + V+S G++L +++ G+ P
Sbjct: 170 D----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 429 IIHRNIS-SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
I+H ++ + +++DG KL DFG+A M P T S + + G + Y+ PE + +
Sbjct: 132 IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDM 187
Query: 488 VATPKG-----------DVYSFGVVLLELITGERP 511
++ + DV+S G +L + G+ P
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 429 IIHRNIS-SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
I+H ++ + +++DG KL DFG+A M P T S + + G + Y+ PE + +
Sbjct: 176 IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDM 231
Query: 488 VATPKG-----------DVYSFGVVLLELITGERP 511
++ + DV+S G +L + G+ P
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 429 IIHRNIS-SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
I+H ++ + +++DG KL DFG+A M P T S + + G + Y+ PE + +
Sbjct: 128 IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDM 183
Query: 488 VATPKG-----------DVYSFGVVLLELITGERP 511
++ + DV+S G +L + G+ P
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 429 IIHRNIS-SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
I+H ++ + +++DG KL DFG+A M P T S + + G + Y+ PE + +
Sbjct: 176 IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDM 231
Query: 488 VATPKG-----------DVYSFGVVLLELITGERP 511
++ + DV+S G +L + G+ P
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 429 IIHRNIS-SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
I+H ++ + +++DG KL DFG+A M P T S + + G + Y+ PE + +
Sbjct: 176 IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT--SVVKDSQVGAVNYMPPEAIKDM 231
Query: 488 VATPKG-----------DVYSFGVVLLELITGERP 511
++ + DV+S G +L + G+ P
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 30/226 (13%)
Query: 298 LSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE------------ 345
+++L + ++ I +G GA + G + IKR+ ++
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
K L EI L H N++ L V +E + YL + L H+ + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 406 LRLRIAIGSAR-GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464
++ + GL LH ++HR++ ILL + + + DF LAR + D +
Sbjct: 134 QHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADAN 189
Query: 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLEL 505
+ +V + Y APE LV KG D++S G V+ E+
Sbjct: 190 KTHYVTHRW----YRAPE----LVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 30/226 (13%)
Query: 298 LSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE------------ 345
+++L + ++ I +G GA + G + IKR+ ++
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 346 KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405
K L EI L H N++ L V +E + YL + L H+ + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 406 LRLRIAIGSAR-GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464
++ + GL LH ++HR++ ILL + + + DF LAR + D +
Sbjct: 134 QHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADAN 189
Query: 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKG-----DVYSFGVVLLEL 505
+ +V + Y APE LV KG D++S G V+ E+
Sbjct: 190 KTHYVTHRW----YRAPE----LVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 65/183 (35%), Gaps = 39/183 (21%)
Query: 409 RIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA-----RLMNPVDT 463
+IA+ + L LH + +IHR++ +L++ + K DFG++ + +D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 464 HLSTF-----VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAP 518
+ +N E GY + K D++S G+ +EL P
Sbjct: 198 GCKPYXAPERINPELNQKGY-----------SVKSDIWSLGITXIELAILRFPYD----- 241
Query: 519 ESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFE 578
W T + L + F E F+ C+ KER T E
Sbjct: 242 --------SWGTPFQQLKQVVEEPSPQLPADKFSAE---FVDFTSQCLKKNSKERPTYPE 290
Query: 579 VYQ 581
+ Q
Sbjct: 291 LXQ 293
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
L + H N IIHR++ C+LL + KL FG+A + G
Sbjct: 144 ALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG----ESGLVAGGRV 196
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
G ++APE + DV+ GV+L L++G P + T
Sbjct: 197 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK 239
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEF 473
L + H N IIHR++ C+LL + KL FG+A + G
Sbjct: 142 ALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG----ESGLVAGGRV 194
Query: 474 GDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516
G ++APE + DV+ GV+L L++G P + T
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 27/215 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIA--MLPGGCFIM-------IKRLEDSQHSEKEFLSEINTLG 356
+ F + IGTG G + M G + M + +L+ +H+ L+E L
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT----LNEKRILQ 96
Query: 357 SVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR 416
+V LV L +V Y+ G ++ L + P A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR----RIGRFSEPHARFYAAQIVL 152
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
+LH + +I+R++ + +L+D K++DFG A+ + L G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTP 202
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
Y+APE + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 27/215 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIA--MLPGGCFIM-------IKRLEDSQHSEKEFLSEINTLG 356
+ F + IGTG G + M G + M + +L+ +H+ L+E L
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT----LNEKRILQ 96
Query: 357 SVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR 416
+V LV L +V Y+ G ++ L + P A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR----RIGRFSEPHARFYAAQIVL 152
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
+LH + +I+R++ + +L+D K++DFG A+ + L G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTP 202
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
Y+APE + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 21/169 (12%)
Query: 302 MKATNSFSKNNIIGTGRTGATYIAMLPGG----CFIMIKRLEDSQHSEKEFLSEINTLGS 357
+K +++ ++IG G G Y+A + R+ + K L EI L
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 358 VRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHM-DWPLRLR------I 410
++ ++ L + E LL + LY L A+ ++ + P+ L I
Sbjct: 84 LKSDYIIRLHDLIIP--EDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEQHVKTI 136
Query: 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
G ++H + IIHR++ LL+ D K+ DFGLAR +N
Sbjct: 137 LYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 27/215 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIA--MLPGGCFIM-------IKRLEDSQHSEKEFLSEINTLG 356
+ F + IGTG G + M G + M + +L+ +H+ L+E L
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT----LNEKRILQ 96
Query: 357 SVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR 416
+V LV L +V Y+ G ++ L + P A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVL 152
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
+LH + +I+R++ + +L+D K++DFG A+ + L G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTP 202
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
Y+APE + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 351 EINTLGSVRHRNLVPLLGFCVAKKER--LLVYSYLENGTL----YDKLHPAEHEVMHMDW 404
EI L ++H N++ L ++ +R L++ Y E+ + + A + + +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 405 PLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP----KLSDFGLARLMNP 460
+ + G+ +LH N ++HR++ IL+ G+ K++D G ARL N
Sbjct: 128 GMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKG-DVYSFGVVLLELITGE 509
L+ ++ Y APE K D+++ G + EL+T E
Sbjct: 185 PLKPLAD-LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 56/278 (20%)
Query: 264 KKEDDPEGNKWAKRIKGTKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATY 323
+K+ G++ K+ + ++ + FE+S++ + +S+ I+G G +G
Sbjct: 2 EKKKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSE-----------KILGYGSSGTVV 50
Query: 324 IAMLPGGCFIMIKRLE----DSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379
G + +KR+ D E + L+E S H N++ +C +R L
Sbjct: 51 FQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE-----SDDHPNVIRY--YCSETTDRFL- 102
Query: 380 YSYLE--NGTLYDKLHPA----EHEVMHMDW-PLRLRIAIGSARGLAWLHHNCNPRIIHR 432
Y LE N L D + E+ + ++ P+ L I S G+A LH + +IIHR
Sbjct: 103 YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS--GVAHLH---SLKIIHR 157
Query: 433 NISSKCILLDG-------------DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
++ + IL+ + +SDFGL + ++ +N G G+
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 217
Query: 480 APEY-----PRTLVATPKGDVYSFGVVLLELIT-GERP 511
APE R L T D++S G V +++ G+ P
Sbjct: 218 APELLEESTKRRL--TRSIDIFSMGCVFYYILSKGKHP 253
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 23/183 (12%)
Query: 343 HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMH 401
H E+ L + HRN++ L+ F + LV+ + G++ +H H
Sbjct: 52 HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-- 109
Query: 402 MDWPLRLRIAIGS-ARGLAWLHHNCNPRIIHRNISSKCILLD--GDFEP-KLSDFGLARL 457
L + + A L +LH N I HR++ + IL + P K+ DFGL
Sbjct: 110 ---ELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSG 163
Query: 458 MNPVDTHLSTFVNGEF----GDLGYVAPEYPRTL-----VATPKGDVYSFGVVLLELITG 508
+ ++ S E G Y+APE + + D++S GV+L L++G
Sbjct: 164 IK-LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
Query: 509 ERP 511
P
Sbjct: 223 YPP 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 429 IIHRNIS-SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL 487
I+H ++ + +++DG KL DFG+A M P + + G + Y+ PE + +
Sbjct: 148 IVHSDLKPANFLIVDGML--KLIDFGIANQMQP--DXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 488 VATPKG-----------DVYSFGVVLLELITGERP 511
++ + DV+S G +L + G+ P
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 56/278 (20%)
Query: 264 KKEDDPEGNKWAKRIKGTKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATY 323
+K+ G++ K+ + ++ + FE+S++ + +S+ I+G G +G
Sbjct: 2 EKKKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSE-----------KILGYGSSGTVV 50
Query: 324 IAMLPGGCFIMIKRLE----DSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379
G + +KR+ D E + L+E S H N++ +C +R L
Sbjct: 51 FQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE-----SDDHPNVIRY--YCSETTDRFL- 102
Query: 380 YSYLE--NGTLYDKLHPA----EHEVMHMDW-PLRLRIAIGSARGLAWLHHNCNPRIIHR 432
Y LE N L D + E+ + ++ P+ L I S G+A LH + +IIHR
Sbjct: 103 YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS--GVAHLH---SLKIIHR 157
Query: 433 NISSKCILLDG-------------DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYV 479
++ + IL+ + +SDFGL + ++ +N G G+
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 217
Query: 480 APEY-----PRTLVATPKGDVYSFGVVLLELIT-GERP 511
APE R L T D++S G V +++ G+ P
Sbjct: 218 APELLEESTKRRL--TRSIDIFSMGCVFYYILSKGKHP 253
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 27/215 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIA--MLPGGCFIM-------IKRLEDSQHSEKEFLSEINTLG 356
+ F + +GTG G + M G + M + +L++ +H+ L+E L
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT----LNEKRILQ 96
Query: 357 SVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR 416
+V LV L +V Y G ++ L + P A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVL 152
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
+LH + +I+R++ + +++D K++DFGLA+ + L G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-------GTP 202
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
Y+APE + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 429 IIHRNISSKCILLDG-DFEPKLSDFGLARLMNPVDTHLSTFVNGEF--GDLGYVAPEYPR 485
I HR+I + +L++ D KL DFG A+ + P + ++ + + +L A EY
Sbjct: 162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEY-- 219
Query: 486 TLVATPKGDVYSFGVVLLELITGE 509
TP D++S G V ELI G+
Sbjct: 220 ----TPSIDLWSIGCVFGELILGK 239
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPK-LSDFGLARLMNP--VDTHLSTFVNGEF 473
GL ++H C IIH +I + +L++ P+ L +A L N D H + +
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR- 199
Query: 474 GDLGYVAPEYPRTLVATPKG---DVYSFGVVLLELITGE 509
Y +PE L+ P G D++S ++ ELITG+
Sbjct: 200 ---EYRSPE---VLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPK-LSDFGLARLMNP--VDTHLSTFVNGEF 473
GL ++H C IIH +I + +L++ P+ L +A L N D H + +
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR- 199
Query: 474 GDLGYVAPEYPRTLVATPKG---DVYSFGVVLLELITGE 509
Y +PE L+ P G D++S ++ ELITG+
Sbjct: 200 ---EYRSPE---VLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 37/220 (16%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFL--SEINTLGSVRH--- 360
+ F + +GTG G +++K +E H + L ++ L + H
Sbjct: 42 DQFERIKTLGTGSFGRV----------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 361 -RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
+ ++ + F K L +S+ +N LY + A M R + AR A
Sbjct: 92 EKRILQAVNFPFLTK---LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 420 --------WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG 471
+LH + +I+R++ + +++D K++DFG A+ + L
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 200
Query: 472 EFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G Y+APE + D ++ GV++ E+ G P
Sbjct: 201 --GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV 488
+I+R++ + +L+D K++DFG A+ + L G Y+APE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYLAPEIILSKG 215
Query: 489 ATPKGDVYSFGVVLLELITGERP 511
D ++ GV++ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 37/220 (16%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFL--SEINTLGSVRH--- 360
+ F + +GTG G +++K +E H + L ++ L + H
Sbjct: 42 DQFERIKTLGTGSFGRV----------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 361 -RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
+ ++ + F K L +S+ +N LY + A M R + AR A
Sbjct: 92 EKRILQAVNFPFLTK---LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 420 --------WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG 471
+LH + +I+R++ + +++D K++DFG A+ + L
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 200
Query: 472 EFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G Y+APE + D ++ GV++ E+ G P
Sbjct: 201 --GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMN 459
IIHR++ LL+ D K+ DFGLAR +N
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 28/120 (23%)
Query: 415 ARGLAWLHHNCNPRIIHRNISSKCILLDG-------------DFEPKLSDFGLARLMNPV 461
A G+A LH + +IIHR++ + IL+ + +SDFGL + ++
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 462 DTHLSTFVNGEFGDLGYVAPEY---------PRTLVATPKGDVYSFGVVLLELIT-GERP 511
+ T +N G G+ APE R L T D++S G V +++ G+ P
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRL--TRSIDIFSMGCVFYYILSKGKHP 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN 362
T SF + ++ TG Y + +L + +K++E + L+E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
LV L +V Y+ G ++ L + P A +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERP 511
+ D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3R8R|A Chain A, Transaldolase From Bacillus Subtilis
pdb|3R8R|B Chain B, Transaldolase From Bacillus Subtilis
pdb|3R8R|C Chain C, Transaldolase From Bacillus Subtilis
pdb|3R8R|D Chain D, Transaldolase From Bacillus Subtilis
pdb|3R8R|E Chain E, Transaldolase From Bacillus Subtilis
pdb|3R8R|F Chain F, Transaldolase From Bacillus Subtilis
pdb|3R8R|G Chain G, Transaldolase From Bacillus Subtilis
pdb|3R8R|H Chain H, Transaldolase From Bacillus Subtilis
pdb|3R8R|I Chain I, Transaldolase From Bacillus Subtilis
pdb|3R8R|J Chain J, Transaldolase From Bacillus Subtilis
pdb|3R8R|V Chain V, Transaldolase From Bacillus Subtilis
pdb|3R8R|K Chain K, Transaldolase From Bacillus Subtilis
pdb|3R8R|L Chain L, Transaldolase From Bacillus Subtilis
pdb|3R8R|M Chain M, Transaldolase From Bacillus Subtilis
pdb|3R8R|N Chain N, Transaldolase From Bacillus Subtilis
pdb|3R8R|W Chain W, Transaldolase From Bacillus Subtilis
pdb|3R8R|P Chain P, Transaldolase From Bacillus Subtilis
pdb|3R8R|R Chain R, Transaldolase From Bacillus Subtilis
pdb|3R8R|T Chain T, Transaldolase From Bacillus Subtilis
pdb|3R8R|U Chain U, Transaldolase From Bacillus Subtilis
Length = 212
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 260 VYVKKKEDDPEGNKWAKRIKGTKGIKVSAFEKSVEKMR-LSDLMKATNS---FSKNNIIG 315
+ +K +E EG + AK I +K+ ++ +R L+DL TN F+ N +
Sbjct: 60 ISLKAEEMIEEGKELAK-IAPNITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALL 118
Query: 316 TGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTL 355
R GATY++ G RL+D H+ + +SE+ +
Sbjct: 119 AARAGATYVSPFLG-------RLDDIGHNGLDLISEVKQI 151
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN 362
T SF + ++ TG Y + +L + +K++E + L+E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
LV L +V Y+ G ++ L + P A +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERP 511
+ D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN 362
T SF + ++ TG Y + +L + +K++E + L+E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
LV L +V Y+ G ++ L + P A +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERP 511
+ D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 84/215 (39%), Gaps = 27/215 (12%)
Query: 306 NSFSKNNIIGTGRTGATYIA--MLPGGCFIM-------IKRLEDSQHSEKEFLSEINTLG 356
+ F + +GTG G + M G + M + +L++ +H+ L+E L
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT----LNEKRILQ 96
Query: 357 SVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR 416
+V LV L +V Y G ++ L + P A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVL 152
Query: 417 GLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476
+LH + +I+R++ + +++D +++DFGLA+ + L G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-------GTP 202
Query: 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
Y+APE + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN 362
T SF + ++ TG Y + +L + +K++E + L+E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
LV L +V Y+ G ++ L + P A +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERP 511
+ D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 304 ATNSFSKNNIIGTGRTGATY-IAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN 362
T SF + ++ TG Y + +L + +K++E + L+E L +V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 103
Query: 363 LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422
LV L +V Y+ G ++ L + P A +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 483 YPRTLVATPKGDVYSFGVVLLELITGERP 511
+ D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 429 IIHRNISSKCIL-LDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP 484
++HR++ IL +D P ++ DFG A+ + + L T +VAPE
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA----NFVAPEVL 192
Query: 485 RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
D++S GV+L ++TG P N P+
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTP--FANGPD 225
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 37/220 (16%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFL--SEINTLGSVRH--- 360
+ F + +GTG G +++K +E H + L ++ L + H
Sbjct: 41 DQFERIKTLGTGSFGRV----------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 361 -RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
+ ++ + F K L +S+ +N LY + A M R + AR A
Sbjct: 91 EKRILQAVNFPFLVK---LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 420 --------WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG 471
+LH + +I+R++ + +++D K++DFG A+ + L
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 199
Query: 472 EFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G Y+APE + D ++ GV++ E+ G P
Sbjct: 200 --GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 86/220 (39%), Gaps = 37/220 (16%)
Query: 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFL--SEINTLGSVRH--- 360
+ F + +GTG G +++K +E H + L ++ L + H
Sbjct: 42 DQFERIKTLGTGSFGRV----------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 361 -RNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419
+ ++ + F K L +S+ +N LY + A M R AR A
Sbjct: 92 EKRILQAVNFPFLTK---LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYA 148
Query: 420 --------WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG 471
+LH + +I+R++ + +++D K++DFG A+ + L
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 200
Query: 472 EFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511
G Y+APE + D ++ GV++ E+ G P
Sbjct: 201 --GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV 488
+I+R++ + +++D K++DFG A+ + L G Y+APE +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILSKG 214
Query: 489 ATPKGDVYSFGVVLLELITGERP 511
D ++ GV++ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507
KL DFG A + D H + +N Y APE L D++SFG VL EL T
Sbjct: 202 KLIDFGCATFKS--DYH-GSIINTR----QYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
Query: 508 G 508
G
Sbjct: 255 G 255
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 16/173 (9%)
Query: 345 EKEFLSEINTLGSVRHRNLVPLLG--FCVAKKERLLVYSYLENG--TLYDKLHPAEHEVM 400
E EI L +RH+N++ L+ + K++ +V Y G + D + V
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 401 HMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460
I GL +LH I+H++I +LL K+S G+A ++P
Sbjct: 110 QAHGYFCQLI-----DGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161
Query: 461 VDTHLSTFVNGEFGDLGYVAPEYPRTL--VATPKGDVYSFGVVLLELITGERP 511
+ + G + PE L + K D++S GV L + TG P
Sbjct: 162 FAADDTCRTSQ--GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 408 LRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455
L+I + R + +H P IIHR++ + +LL KL DFG A
Sbjct: 139 LKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEF----LSEINTLGSV 358
+ + + + +G G G Y A+ + IKR+ +H E+ + E++ L +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKEL 90
Query: 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL 418
+HRN++ L L++ Y EN + M + + +R+ L
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAENDL---------KKYMDKNPDVSMRVIKSFLYQL 141
Query: 419 AWLHHNCNP-RIIHRNISSKCILL---DGDFEP--KLSDFGLAR 456
+ C+ R +HR++ + +LL D P K+ DFGLAR
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 429 IIHRNISSKCIL-LDGDFEP---KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP 484
++HR++ IL +D P ++ DFG A+ + + L T +VAPE
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY----TANFVAPEVL 192
Query: 485 RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519
D++S GV+L +TG P N P+
Sbjct: 193 ERQGYDAACDIWSLGVLLYTXLTGYTP--FANGPD 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 343 HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMH 401
H E+ L + HRN++ L+ F + LV+ + G++ +H H
Sbjct: 52 HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-- 109
Query: 402 MDWPLRLRIAIGS-ARGLAWLHHNCNPRIIHRNISSKCILLD--GDFEP-KLSDFGLARL 457
L + + A L +LH N I HR++ + IL + P K+ DF L
Sbjct: 110 ---ELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163
Query: 458 MNPVDTHLSTFVNGEF----GDLGYVAPEYPRTL-----VATPKGDVYSFGVVLLELITG 508
+ ++ S E G Y+APE + + D++S GV+L L++G
Sbjct: 164 IK-LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
Query: 509 ERP 511
P
Sbjct: 223 YPP 225
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 125 DISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFT----GKIPPQLGLLNR 180
D+ L ++ L L+ N L+ P ++ T L L LN+NR T +P L +L+
Sbjct: 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILD- 532
Query: 181 IKTFSVASNLLTGPVPSFANVNFTAEDFANNSGLC 215
++ N L P P V+ + D +N +C
Sbjct: 533 -----ISRNQLLAPNPD-VFVSLSVLDITHNKFIC 561
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,481,678
Number of Sequences: 62578
Number of extensions: 770902
Number of successful extensions: 3481
Number of sequences better than 100.0: 968
Number of HSP's better than 100.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 375
Number of HSP's that attempted gapping in prelim test: 1777
Number of HSP's gapped (non-prelim): 1016
length of query: 618
length of database: 14,973,337
effective HSP length: 105
effective length of query: 513
effective length of database: 8,402,647
effective search space: 4310557911
effective search space used: 4310557911
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)