Query 007088
Match_columns 618
No_of_seqs 728 out of 5122
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 18:45:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007088.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007088hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.2E-61 2.6E-66 573.0 38.3 471 82-589 475-954 (968)
2 KOG1187 Serine/threonine prote 100.0 1.6E-55 3.6E-60 456.1 27.8 291 292-589 61-355 (361)
3 KOG0192 Tyrosine kinase specif 100.0 2.8E-47 6E-52 391.8 22.2 256 311-592 46-309 (362)
4 KOG0581 Mitogen-activated prot 100.0 4.1E-47 8.8E-52 371.9 19.4 255 295-581 75-334 (364)
5 KOG0575 Polo-like serine/threo 100.0 8.1E-47 1.7E-51 390.1 17.0 246 306-581 18-268 (592)
6 KOG0615 Serine/threonine prote 100.0 1.1E-46 2.5E-51 370.8 10.6 251 305-581 171-436 (475)
7 KOG0197 Tyrosine kinases [Sign 100.0 3.1E-46 6.8E-51 382.3 14.1 253 310-588 210-463 (468)
8 KOG0595 Serine/threonine-prote 100.0 2.2E-45 4.7E-50 362.5 18.3 200 305-516 9-218 (429)
9 KOG0591 NIMA (never in mitosis 100.0 4.9E-47 1.1E-51 355.8 3.1 257 307-585 20-284 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 2.3E-44 5E-49 352.5 16.1 241 305-574 24-269 (357)
11 KOG0593 Predicted protein kina 100.0 2.9E-44 6.4E-49 340.3 13.7 264 306-580 2-282 (396)
12 KOG0661 MAPK related serine/th 100.0 4.8E-44 1E-48 358.1 10.6 266 304-582 8-291 (538)
13 KOG0592 3-phosphoinositide-dep 100.0 3.6E-43 7.7E-48 357.1 13.6 253 302-580 69-336 (604)
14 KOG0659 Cdk activating kinase 100.0 1.1E-42 2.4E-47 324.5 15.3 282 306-603 2-301 (318)
15 KOG1026 Nerve growth factor re 100.0 2.1E-43 4.5E-48 378.4 11.1 263 306-591 486-767 (774)
16 KOG0582 Ste20-like serine/thre 100.0 4.7E-42 1E-46 341.3 19.7 263 305-581 25-292 (516)
17 KOG0600 Cdc2-related protein k 100.0 8E-43 1.7E-47 351.8 14.2 266 305-581 116-399 (560)
18 KOG0196 Tyrosine kinase, EPH ( 100.0 2E-43 4.4E-48 370.8 9.2 272 293-589 607-894 (996)
19 KOG0578 p21-activated serine/t 100.0 3.7E-42 8.1E-47 352.8 16.9 247 306-581 273-522 (550)
20 cd05102 PTKc_VEGFR3 Catalytic 100.0 9E-42 1.9E-46 356.1 19.1 263 305-589 6-337 (338)
21 KOG0198 MEKK and related serin 100.0 9.7E-42 2.1E-46 340.2 16.0 257 306-585 17-279 (313)
22 KOG0597 Serine-threonine prote 100.0 3.7E-42 8.1E-47 349.5 13.1 245 306-581 2-250 (808)
23 KOG0616 cAMP-dependent protein 100.0 5.5E-42 1.2E-46 324.4 11.4 198 306-517 44-246 (355)
24 KOG0583 Serine/threonine prote 100.0 6E-41 1.3E-45 348.2 20.2 254 304-588 15-280 (370)
25 KOG0605 NDR and related serine 100.0 3.1E-41 6.8E-46 343.4 17.1 249 304-575 139-435 (550)
26 PHA02988 hypothetical protein; 100.0 1.4E-40 3E-45 338.1 21.4 247 311-588 25-281 (283)
27 KOG0193 Serine/threonine prote 100.0 8.3E-42 1.8E-46 351.1 12.1 267 298-589 384-656 (678)
28 KOG0585 Ca2+/calmodulin-depend 100.0 5E-41 1.1E-45 335.9 16.5 256 302-581 93-371 (576)
29 KOG0588 Serine/threonine prote 100.0 4.1E-41 9E-46 348.7 14.1 246 306-582 12-263 (786)
30 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.1E-40 8.8E-45 329.6 20.0 251 306-583 4-255 (256)
31 cd05072 PTKc_Lyn Catalytic dom 100.0 2.6E-40 5.6E-45 331.9 18.2 255 306-586 6-261 (261)
32 KOG0663 Protein kinase PITSLRE 100.0 1.2E-40 2.5E-45 320.0 14.6 265 305-581 75-360 (419)
33 cd05068 PTKc_Frk_like Catalyti 100.0 7.6E-40 1.7E-44 328.6 20.9 256 305-586 5-261 (261)
34 cd05096 PTKc_DDR1 Catalytic do 100.0 4E-40 8.7E-45 338.4 19.2 264 306-585 5-304 (304)
35 KOG2345 Serine/threonine prote 100.0 4.3E-41 9.4E-46 310.9 10.6 266 304-586 19-300 (302)
36 cd05631 STKc_GRK4 Catalytic do 100.0 3.2E-40 7E-45 335.9 18.2 250 307-581 1-260 (285)
37 KOG0201 Serine/threonine prote 100.0 2.8E-41 6E-46 335.8 9.6 247 306-581 13-262 (467)
38 cd05104 PTKc_Kit Catalytic dom 100.0 3.7E-40 8.1E-45 348.2 18.6 260 305-586 34-374 (375)
39 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.5E-40 1.2E-44 330.7 19.0 254 306-586 5-265 (266)
40 cd05052 PTKc_Abl Catalytic dom 100.0 7.8E-40 1.7E-44 328.9 19.5 255 306-586 6-262 (263)
41 KOG1095 Protein tyrosine kinas 100.0 2.5E-40 5.5E-45 367.1 16.4 262 307-591 693-966 (1025)
42 KOG0694 Serine/threonine prote 100.0 3.1E-40 6.6E-45 345.1 15.8 242 304-576 366-613 (694)
43 cd05106 PTKc_CSF-1R Catalytic 100.0 5.1E-40 1.1E-44 346.9 17.6 261 305-587 37-373 (374)
44 KOG0580 Serine/threonine prote 100.0 5.7E-41 1.2E-45 308.8 8.9 248 305-582 21-273 (281)
45 cd07848 STKc_CDKL5 Catalytic d 100.0 1.9E-39 4E-44 330.5 20.4 266 306-581 1-283 (287)
46 cd05571 STKc_PKB Catalytic dom 100.0 3.9E-40 8.6E-45 341.4 15.5 240 312-581 1-250 (323)
47 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.2E-40 1.6E-44 328.5 16.7 256 304-586 4-261 (261)
48 cd05612 STKc_PRKX_like Catalyt 100.0 2.7E-40 5.9E-45 337.4 13.6 243 306-581 1-253 (291)
49 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1E-39 2.2E-44 339.9 18.1 252 306-582 1-257 (333)
50 KOG4721 Serine/threonine prote 100.0 6.4E-41 1.4E-45 340.2 8.8 243 311-589 129-371 (904)
51 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-39 3.7E-44 331.1 19.1 264 306-581 5-284 (288)
52 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.1E-39 6.8E-44 323.9 20.0 253 306-585 6-259 (260)
53 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.7E-39 3.8E-44 325.1 18.0 252 306-584 4-256 (256)
54 PTZ00263 protein kinase A cata 100.0 1.8E-39 3.9E-44 337.3 18.7 243 306-581 18-270 (329)
55 cd05071 PTKc_Src Catalytic dom 100.0 4.9E-39 1.1E-43 323.0 21.1 255 305-586 5-260 (262)
56 KOG0194 Protein tyrosine kinas 100.0 5.3E-40 1.1E-44 342.0 14.1 260 306-592 157-426 (474)
57 KOG0589 Serine/threonine prote 100.0 2.3E-40 5.1E-45 338.2 11.2 250 306-582 4-258 (426)
58 cd06649 PKc_MEK2 Catalytic dom 100.0 3.6E-39 7.8E-44 335.4 20.3 199 305-515 4-205 (331)
59 cd05048 PTKc_Ror Catalytic Dom 100.0 3.1E-39 6.7E-44 328.1 19.2 258 306-586 5-283 (283)
60 cd05059 PTKc_Tec_like Catalyti 100.0 2.9E-39 6.3E-44 323.4 18.5 250 307-583 5-255 (256)
61 KOG1989 ARK protein kinase fam 100.0 1.7E-39 3.7E-44 350.1 17.7 263 305-591 36-316 (738)
62 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.5E-39 5.4E-44 332.4 18.2 263 305-581 4-287 (303)
63 KOG0658 Glycogen synthase kina 100.0 1.6E-40 3.5E-45 324.8 8.6 265 307-587 25-313 (364)
64 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.7E-39 1E-43 322.6 19.4 254 305-585 5-259 (260)
65 cd05595 STKc_PKB_beta Catalyti 100.0 1.8E-39 3.9E-44 336.4 16.7 240 312-581 1-250 (323)
66 KOG0660 Mitogen-activated prot 100.0 1.5E-39 3.2E-44 317.4 14.9 282 304-597 20-323 (359)
67 cd05033 PTKc_EphR Catalytic do 100.0 8.7E-39 1.9E-43 321.8 21.0 255 306-586 4-265 (266)
68 PHA03212 serine/threonine kina 100.0 7.4E-39 1.6E-43 339.4 21.5 261 305-581 91-375 (391)
69 cd08228 STKc_Nek6 Catalytic do 100.0 6.1E-39 1.3E-43 322.9 19.8 260 306-587 2-266 (267)
70 cd05585 STKc_YPK1_like Catalyt 100.0 8.3E-40 1.8E-44 337.3 13.7 237 314-580 1-245 (312)
71 PLN00034 mitogen-activated pro 100.0 6.1E-39 1.3E-43 336.7 20.1 245 307-581 75-327 (353)
72 cd05108 PTKc_EGFR Catalytic do 100.0 6.4E-39 1.4E-43 331.3 19.9 258 306-590 7-272 (316)
73 cd05593 STKc_PKB_gamma Catalyt 100.0 2.4E-39 5.2E-44 336.1 16.7 241 312-582 1-251 (328)
74 cd07862 STKc_CDK6 Catalytic do 100.0 3.1E-39 6.8E-44 329.3 17.3 261 306-581 1-286 (290)
75 cd05049 PTKc_Trk Catalytic dom 100.0 4.7E-39 1E-43 326.1 18.5 256 306-584 5-279 (280)
76 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.2E-39 1.6E-43 325.5 19.4 269 307-587 4-282 (283)
77 cd05093 PTKc_TrkB Catalytic do 100.0 8E-39 1.7E-43 326.1 19.8 261 306-589 5-282 (288)
78 cd05069 PTKc_Yes Catalytic dom 100.0 1.3E-38 2.8E-43 319.5 20.6 253 306-585 6-259 (260)
79 KOG0611 Predicted serine/threo 100.0 9E-40 2E-44 320.0 11.7 245 306-582 53-303 (668)
80 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.5E-39 1.4E-43 340.1 19.3 262 305-588 36-399 (400)
81 cd05094 PTKc_TrkC Catalytic do 100.0 1.4E-38 3E-43 324.8 20.6 261 306-589 5-285 (291)
82 cd05054 PTKc_VEGFR Catalytic d 100.0 8.3E-39 1.8E-43 333.1 19.1 261 306-588 7-335 (337)
83 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-38 4E-43 330.1 21.7 199 305-515 4-205 (333)
84 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.1E-38 4.6E-43 318.8 21.4 260 306-587 2-266 (267)
85 cd05588 STKc_aPKC Catalytic do 100.0 1.2E-38 2.6E-43 331.1 19.9 248 312-580 1-260 (329)
86 PTZ00426 cAMP-dependent protei 100.0 9.5E-39 2.1E-43 332.8 19.2 243 306-581 30-283 (340)
87 cd05062 PTKc_IGF-1R Catalytic 100.0 8.3E-39 1.8E-43 324.0 18.3 259 304-585 4-277 (277)
88 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-38 2.6E-43 331.0 19.9 244 312-576 1-250 (329)
89 cd05034 PTKc_Src_like Catalyti 100.0 1.5E-38 3.1E-43 319.1 19.4 255 305-585 5-260 (261)
90 cd05053 PTKc_FGFR Catalytic do 100.0 9.4E-39 2E-43 326.3 18.2 261 304-587 10-292 (293)
91 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-38 2.9E-43 317.7 18.8 247 312-584 1-251 (252)
92 cd05045 PTKc_RET Catalytic dom 100.0 1.6E-38 3.5E-43 324.1 19.8 260 307-589 1-289 (290)
93 cd08229 STKc_Nek7 Catalytic do 100.0 1.4E-38 3.1E-43 320.3 19.0 259 306-586 2-265 (267)
94 PF07714 Pkinase_Tyr: Protein 100.0 1.3E-39 2.8E-44 326.6 11.4 248 311-583 4-259 (259)
95 cd05089 PTKc_Tie1 Catalytic do 100.0 1.8E-38 3.8E-43 325.1 19.9 261 306-592 2-281 (297)
96 cd05090 PTKc_Ror1 Catalytic do 100.0 1.9E-38 4.1E-43 322.5 19.6 257 306-585 5-282 (283)
97 cd05584 STKc_p70S6K Catalytic 100.0 3.1E-38 6.7E-43 327.2 21.5 240 312-581 2-255 (323)
98 cd05589 STKc_PKN Catalytic dom 100.0 8.9E-39 1.9E-43 331.4 17.3 243 308-581 1-256 (324)
99 KOG0594 Protein kinase PCTAIRE 100.0 3.4E-39 7.3E-44 316.2 13.3 265 306-582 11-302 (323)
100 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.6E-39 5.7E-44 339.1 13.3 254 306-582 1-285 (350)
101 cd05608 STKc_GRK1 Catalytic do 100.0 9.6E-39 2.1E-43 324.2 16.9 246 314-581 1-256 (280)
102 PTZ00267 NIMA-related protein 100.0 1.1E-38 2.5E-43 347.1 18.5 252 307-581 68-322 (478)
103 cd05111 PTK_HER3 Pseudokinase 100.0 3.2E-38 6.8E-43 320.2 20.5 257 306-589 7-271 (279)
104 cd05073 PTKc_Hck Catalytic dom 100.0 2.9E-38 6.3E-43 317.0 19.9 254 305-585 5-259 (260)
105 KOG0033 Ca2+/calmodulin-depend 100.0 5E-41 1.1E-45 309.3 -0.3 250 305-581 10-266 (355)
106 cd05599 STKc_NDR_like Catalyti 100.0 4.7E-39 1E-43 339.1 14.4 253 306-581 1-295 (364)
107 cd05614 STKc_MSK2_N N-terminal 100.0 1.4E-38 3.1E-43 331.1 17.8 250 307-581 1-266 (332)
108 cd05594 STKc_PKB_alpha Catalyt 100.0 4.2E-39 9E-44 334.0 13.4 240 312-581 1-251 (325)
109 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-38 4.6E-43 333.8 19.0 203 306-515 1-239 (363)
110 cd05043 PTK_Ryk Pseudokinase d 100.0 3E-38 6.5E-43 320.4 19.4 262 305-589 5-279 (280)
111 cd05039 PTKc_Csk_like Catalyti 100.0 4.2E-38 9.1E-43 314.9 20.1 251 305-586 5-256 (256)
112 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-38 2.3E-43 338.2 16.6 253 307-581 2-304 (381)
113 cd05035 PTKc_Axl_like Catalyti 100.0 5.3E-38 1.1E-42 317.0 20.8 256 308-586 1-272 (273)
114 cd06637 STKc_TNIK Catalytic do 100.0 1.9E-38 4.1E-43 320.3 17.5 253 303-581 3-268 (272)
115 cd05088 PTKc_Tie2 Catalytic do 100.0 2.3E-38 4.9E-43 325.2 18.3 260 306-591 7-285 (303)
116 cd05601 STKc_CRIK Catalytic do 100.0 2.9E-39 6.3E-44 336.0 11.9 251 306-581 1-262 (330)
117 cd05596 STKc_ROCK Catalytic do 100.0 5.4E-39 1.2E-43 338.7 13.9 253 304-582 41-304 (370)
118 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.4E-38 5.2E-43 330.1 18.6 265 307-581 1-289 (338)
119 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.8E-38 6.1E-43 325.2 18.8 261 306-589 18-302 (307)
120 PRK13184 pknD serine/threonine 100.0 3.8E-38 8.3E-43 352.4 21.3 265 306-589 2-293 (932)
121 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.6E-38 1E-42 323.1 20.3 261 305-588 14-298 (304)
122 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-38 2.5E-43 330.6 15.8 240 307-576 1-246 (324)
123 cd05605 STKc_GRK4_like Catalyt 100.0 2.4E-38 5.2E-43 322.1 17.9 250 307-581 1-260 (285)
124 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.4E-38 5.2E-43 321.8 17.8 265 306-586 4-283 (284)
125 PTZ00283 serine/threonine prot 100.0 1.1E-38 2.3E-43 347.6 16.1 258 302-582 28-297 (496)
126 cd05055 PTKc_PDGFR Catalytic d 100.0 4.5E-38 9.7E-43 322.8 19.8 257 306-586 35-301 (302)
127 cd08529 STKc_FA2-like Catalyti 100.0 4E-38 8.7E-43 314.7 18.9 249 307-582 1-253 (256)
128 cd05590 STKc_nPKC_eta Catalyti 100.0 1E-38 2.2E-43 330.3 15.0 236 312-577 1-242 (320)
129 cd05075 PTKc_Axl Catalytic dom 100.0 5.8E-38 1.2E-42 316.8 20.2 256 308-586 1-271 (272)
130 cd05109 PTKc_HER2 Catalytic do 100.0 5.5E-38 1.2E-42 318.3 20.1 258 306-590 7-272 (279)
131 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.9E-38 1.1E-42 316.7 19.3 257 305-586 4-267 (268)
132 cd05085 PTKc_Fer Catalytic dom 100.0 6.5E-38 1.4E-42 312.3 19.9 246 312-584 1-249 (250)
133 cd05591 STKc_nPKC_epsilon Cata 100.0 1E-38 2.3E-43 330.4 14.6 240 312-581 1-253 (321)
134 PTZ00036 glycogen synthase kin 100.0 1.2E-38 2.7E-43 342.9 15.8 262 304-581 64-350 (440)
135 cd05592 STKc_nPKC_theta_delta 100.0 2E-38 4.3E-43 327.5 16.4 239 312-580 1-246 (316)
136 KOG3653 Transforming growth fa 100.0 5E-38 1.1E-42 314.7 18.6 269 309-592 213-509 (534)
137 KOG4257 Focal adhesion tyrosin 100.0 3.8E-38 8.3E-43 323.1 18.1 253 308-588 391-651 (974)
138 cd05116 PTKc_Syk Catalytic dom 100.0 6.8E-38 1.5E-42 313.7 19.6 246 313-585 2-254 (257)
139 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.7E-38 8.1E-43 319.3 17.9 258 304-584 4-276 (277)
140 cd05112 PTKc_Itk Catalytic dom 100.0 6E-38 1.3E-42 313.7 19.1 251 306-583 4-255 (256)
141 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-38 2.9E-43 337.2 15.1 254 306-582 1-305 (377)
142 cd06646 STKc_MAP4K5 Catalytic 100.0 7.5E-38 1.6E-42 315.1 19.9 252 306-582 9-265 (267)
143 cd05625 STKc_LATS1 Catalytic d 100.0 1.4E-38 3.1E-43 337.5 15.4 202 307-515 2-251 (382)
144 cd05082 PTKc_Csk Catalytic dom 100.0 6.3E-38 1.4E-42 313.7 19.0 249 306-586 6-256 (256)
145 cd05060 PTKc_Syk_like Catalyti 100.0 6.8E-38 1.5E-42 313.6 19.2 249 312-587 1-256 (257)
146 cd05066 PTKc_EphR_A Catalytic 100.0 8.3E-38 1.8E-42 314.9 19.9 256 306-586 4-266 (267)
147 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-38 3E-43 335.4 14.8 256 301-582 38-304 (370)
148 cd05620 STKc_nPKC_delta Cataly 100.0 2.2E-38 4.8E-43 327.2 16.0 239 312-580 1-246 (316)
149 cd05619 STKc_nPKC_theta Cataly 100.0 2.9E-38 6.2E-43 326.2 16.8 239 312-580 1-246 (316)
150 cd05097 PTKc_DDR_like Catalyti 100.0 7.3E-38 1.6E-42 320.2 19.3 264 306-585 5-295 (295)
151 cd05047 PTKc_Tie Catalytic dom 100.0 7.8E-38 1.7E-42 315.7 19.1 250 312-587 1-269 (270)
152 cd05091 PTKc_Ror2 Catalytic do 100.0 3.9E-38 8.4E-43 320.1 16.8 256 307-585 6-282 (283)
153 cd05061 PTKc_InsR Catalytic do 100.0 8.6E-38 1.9E-42 318.5 19.4 261 304-587 4-279 (288)
154 cd06654 STKc_PAK1 Catalytic do 100.0 1E-37 2.2E-42 319.2 19.9 248 306-581 20-269 (296)
155 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.5E-38 1.4E-42 332.3 19.0 262 304-587 35-400 (401)
156 cd05598 STKc_LATS Catalytic do 100.0 1.8E-38 3.8E-43 336.1 14.7 254 306-582 1-301 (376)
157 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.1E-37 2.4E-42 323.6 20.3 243 312-577 1-249 (327)
158 cd05032 PTKc_InsR_like Catalyt 100.0 4.6E-38 1E-42 318.3 17.0 256 306-584 6-276 (277)
159 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-37 2.6E-42 324.4 20.6 264 306-592 12-299 (334)
160 cd05607 STKc_GRK7 Catalytic do 100.0 4E-38 8.7E-43 319.1 16.5 246 314-583 1-251 (277)
161 KOG1094 Discoidin domain recep 100.0 1.2E-38 2.7E-43 325.0 12.7 264 306-587 538-805 (807)
162 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-37 2.5E-42 312.2 19.6 248 313-586 2-255 (257)
163 cd05616 STKc_cPKC_beta Catalyt 100.0 2.5E-38 5.5E-43 327.9 15.3 240 307-576 1-246 (323)
164 cd05570 STKc_PKC Catalytic dom 100.0 2.5E-38 5.5E-43 327.1 15.2 240 312-581 1-251 (318)
165 cd05575 STKc_SGK Catalytic dom 100.0 1.8E-38 4E-43 328.9 14.0 236 312-577 1-242 (323)
166 cd06619 PKc_MKK5 Catalytic dom 100.0 2.2E-37 4.8E-42 314.0 21.6 250 306-582 1-253 (279)
167 cd05582 STKc_RSK_N N-terminal 100.0 9.2E-39 2E-43 330.5 11.6 237 312-578 2-245 (318)
168 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-37 3.1E-42 318.0 20.1 264 305-584 4-295 (296)
169 cd06638 STKc_myosinIIIA Cataly 100.0 5.9E-38 1.3E-42 319.2 17.1 263 297-582 9-283 (286)
170 cd06625 STKc_MEKK3_like Cataly 100.0 1.4E-37 3E-42 312.3 19.5 252 306-582 2-260 (263)
171 cd05095 PTKc_DDR2 Catalytic do 100.0 1.4E-37 3E-42 318.3 19.6 264 306-585 5-296 (296)
172 cd08219 STKc_Nek3 Catalytic do 100.0 9.5E-38 2.1E-42 312.1 18.0 249 307-582 1-252 (255)
173 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8.8E-38 1.9E-42 317.3 17.9 261 295-581 5-278 (282)
174 cd05092 PTKc_TrkA Catalytic do 100.0 9.6E-38 2.1E-42 316.8 18.2 257 306-585 5-280 (280)
175 cd07863 STKc_CDK4 Catalytic do 100.0 6.6E-38 1.4E-42 319.1 17.0 260 307-581 1-284 (288)
176 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.4E-37 3E-42 321.1 19.5 261 306-589 12-296 (314)
177 cd06639 STKc_myosinIIIB Cataly 100.0 8.7E-38 1.9E-42 318.9 17.7 263 296-581 12-286 (291)
178 cd05065 PTKc_EphR_B Catalytic 100.0 1.3E-37 2.9E-42 313.7 18.8 257 306-586 4-268 (269)
179 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.4E-38 1.8E-42 317.9 17.4 263 307-586 5-283 (284)
180 cd05602 STKc_SGK1 Catalytic do 100.0 2.6E-38 5.7E-43 328.0 13.9 240 312-581 1-246 (325)
181 KOG0599 Phosphorylase kinase g 100.0 1.2E-38 2.6E-43 297.9 10.0 252 303-581 14-282 (411)
182 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.9E-38 1.1E-42 323.7 15.6 264 306-581 6-285 (309)
183 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.3E-37 2.8E-42 325.2 18.9 261 306-588 7-341 (343)
184 cd05058 PTKc_Met_Ron Catalytic 100.0 2.4E-37 5.1E-42 310.5 20.0 253 312-588 1-261 (262)
185 cd07853 STKc_NLK Catalytic dom 100.0 1.3E-37 2.8E-42 329.1 18.9 263 307-582 1-288 (372)
186 cd00192 PTKc Catalytic domain 100.0 2.3E-37 5E-42 309.7 19.8 250 312-584 1-262 (262)
187 PHA03211 serine/threonine kina 100.0 3.2E-37 6.9E-42 331.0 22.0 263 305-581 168-454 (461)
188 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.4E-37 3E-42 315.9 18.0 265 306-587 4-284 (284)
189 KOG4278 Protein tyrosine kinas 100.0 1.1E-38 2.4E-43 326.4 9.7 262 307-594 268-531 (1157)
190 KOG0667 Dual-specificity tyros 100.0 8.6E-38 1.9E-42 326.9 16.7 198 307-517 187-393 (586)
191 cd06612 STKc_MST1_2 Catalytic 100.0 2.2E-37 4.9E-42 309.3 18.9 249 306-581 3-252 (256)
192 cd05622 STKc_ROCK1 Catalytic d 100.0 1.6E-37 3.5E-42 327.5 18.8 259 298-582 35-304 (371)
193 KOG2052 Activin A type IB rece 100.0 2.2E-37 4.8E-42 307.9 18.6 280 294-588 199-505 (513)
194 cd05604 STKc_SGK3 Catalytic do 100.0 2.7E-38 5.8E-43 328.0 12.5 240 312-581 1-246 (325)
195 KOG0610 Putative serine/threon 100.0 1.3E-37 2.9E-42 307.3 16.6 251 307-579 78-389 (459)
196 cd05615 STKc_cPKC_alpha Cataly 100.0 8.7E-38 1.9E-42 323.8 16.1 240 307-576 1-246 (323)
197 cd07876 STKc_JNK2 Catalytic do 100.0 2.9E-37 6.3E-42 324.8 20.3 198 304-516 19-226 (359)
198 cd05050 PTKc_Musk Catalytic do 100.0 1.5E-37 3.2E-42 316.7 17.4 258 305-585 4-288 (288)
199 cd05603 STKc_SGK2 Catalytic do 100.0 4.3E-38 9.3E-43 325.9 13.6 236 312-577 1-242 (321)
200 cd05040 PTKc_Ack_like Catalyti 100.0 2.6E-37 5.6E-42 309.3 18.5 249 312-584 1-256 (257)
201 cd05630 STKc_GRK6 Catalytic do 100.0 1.6E-37 3.4E-42 316.1 17.2 250 307-581 1-260 (285)
202 PHA03207 serine/threonine kina 100.0 4.3E-37 9.3E-42 327.0 21.1 260 305-582 91-375 (392)
203 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.8E-37 4E-42 318.2 17.5 274 306-591 6-297 (301)
204 cd06656 STKc_PAK3 Catalytic do 100.0 4E-37 8.7E-42 315.0 19.9 249 305-581 18-268 (297)
205 cd05056 PTKc_FAK Catalytic dom 100.0 4E-37 8.7E-42 310.4 19.6 256 306-589 6-268 (270)
206 cd05057 PTKc_EGFR_like Catalyt 100.0 5.5E-37 1.2E-41 311.0 20.5 257 306-589 7-271 (279)
207 cd06615 PKc_MEK Catalytic doma 100.0 5.3E-37 1.2E-41 315.8 20.6 257 306-582 1-287 (308)
208 KOG0032 Ca2+/calmodulin-depend 100.0 2.4E-37 5.2E-42 320.9 18.0 249 305-581 34-292 (382)
209 cd05632 STKc_GRK5 Catalytic do 100.0 2.4E-37 5.3E-42 314.7 17.8 249 308-581 2-260 (285)
210 PF00069 Pkinase: Protein kina 100.0 8.3E-38 1.8E-42 313.1 14.0 251 308-581 1-256 (260)
211 cd05110 PTKc_HER4 Catalytic do 100.0 3.6E-37 7.7E-42 316.3 18.9 275 306-607 7-293 (303)
212 cd07861 STKc_CDK1_euk Catalyti 100.0 2E-37 4.3E-42 315.1 16.7 266 307-581 1-281 (285)
213 cd06624 STKc_ASK Catalytic dom 100.0 5.1E-37 1.1E-41 309.3 19.5 255 301-581 3-264 (268)
214 cd05041 PTKc_Fes_like Catalyti 100.0 5.9E-37 1.3E-41 305.6 19.3 247 312-584 1-250 (251)
215 PHA03209 serine/threonine kina 100.0 6.5E-37 1.4E-41 321.6 20.5 193 304-513 64-257 (357)
216 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.9E-37 1.1E-41 312.3 18.9 257 306-583 5-267 (284)
217 cd05627 STKc_NDR2 Catalytic do 100.0 7.8E-38 1.7E-42 329.2 13.4 204 306-516 1-240 (360)
218 PTZ00284 protein kinase; Provi 100.0 4.2E-37 9.1E-42 334.5 19.5 267 300-581 123-437 (467)
219 cd05597 STKc_DMPK_like Catalyt 100.0 7.9E-37 1.7E-41 317.7 20.6 201 306-515 1-211 (331)
220 cd06631 STKc_YSK4 Catalytic do 100.0 7.4E-37 1.6E-41 307.5 19.8 252 307-581 1-261 (265)
221 cd07868 STKc_CDK8 Catalytic do 100.0 1.7E-36 3.6E-41 313.4 22.8 200 311-516 6-220 (317)
222 cd07874 STKc_JNK3 Catalytic do 100.0 3.4E-37 7.4E-42 323.8 18.0 265 303-582 14-311 (355)
223 cd06609 STKc_MST3_like Catalyt 100.0 6.2E-37 1.3E-41 309.7 19.1 247 306-581 1-250 (274)
224 cd06655 STKc_PAK2 Catalytic do 100.0 5.6E-37 1.2E-41 313.8 18.9 248 306-581 19-268 (296)
225 cd05044 PTKc_c-ros Catalytic d 100.0 3.2E-37 6.9E-42 310.8 16.6 251 312-585 1-269 (269)
226 cd06640 STKc_MST4 Catalytic do 100.0 1.3E-36 2.9E-41 307.9 21.0 246 307-582 5-253 (277)
227 cd06608 STKc_myosinIII_like Ca 100.0 1.9E-37 4.1E-42 313.1 14.7 256 303-581 3-271 (275)
228 cd08221 STKc_Nek9 Catalytic do 100.0 9.5E-37 2.1E-41 305.0 19.6 249 307-582 1-253 (256)
229 cd08227 PK_STRAD_alpha Pseudok 100.0 3.6E-37 7.8E-42 319.8 17.0 201 310-515 2-213 (327)
230 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.5E-37 7.5E-42 312.1 16.5 244 308-581 6-252 (277)
231 cd05046 PTK_CCK4 Pseudokinase 100.0 7.4E-37 1.6E-41 309.2 18.8 256 306-584 5-274 (275)
232 cd08223 STKc_Nek4 Catalytic do 100.0 8.2E-37 1.8E-41 305.5 18.9 248 307-581 1-253 (257)
233 cd06645 STKc_MAP4K3 Catalytic 100.0 4.8E-37 1.1E-41 309.2 17.3 251 306-581 9-264 (267)
234 cd05083 PTKc_Chk Catalytic dom 100.0 7E-37 1.5E-41 305.7 18.3 247 306-585 6-253 (254)
235 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.8E-36 3.9E-41 308.1 21.6 265 306-581 1-282 (286)
236 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.3E-36 5E-41 304.7 22.1 254 312-584 1-268 (269)
237 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.7E-36 3.6E-41 303.5 20.8 238 312-584 1-259 (259)
238 cd07875 STKc_JNK1 Catalytic do 100.0 6.3E-37 1.4E-41 322.9 18.3 198 304-516 22-229 (364)
239 cd06643 STKc_SLK Catalytic dom 100.0 9.2E-37 2E-41 309.9 18.8 248 308-581 7-261 (282)
240 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-36 2.7E-41 305.5 19.6 238 312-583 1-261 (262)
241 cd06613 STKc_MAP4K3_like Catal 100.0 1.9E-36 4.1E-41 303.7 20.8 252 306-581 3-259 (262)
242 PTZ00266 NIMA-related protein 100.0 4.7E-37 1E-41 345.0 18.0 262 302-586 9-301 (1021)
243 KOG0574 STE20-like serine/thre 100.0 3E-39 6.5E-44 305.4 0.3 247 308-581 35-282 (502)
244 cd06644 STKc_STK10_LOK Catalyt 100.0 1.5E-36 3.3E-41 310.0 19.9 250 306-581 12-268 (292)
245 cd08528 STKc_Nek10 Catalytic d 100.0 7.1E-37 1.5E-41 308.3 17.1 253 307-584 1-268 (269)
246 cd05574 STKc_phototropin_like 100.0 1.2E-36 2.5E-41 314.4 19.1 254 306-581 1-288 (316)
247 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.1E-36 4.5E-41 308.2 20.6 260 306-581 1-265 (287)
248 cd08217 STKc_Nek2 Catalytic do 100.0 1.2E-36 2.5E-41 305.4 18.3 250 307-581 1-261 (265)
249 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.8E-36 3.9E-41 316.7 20.5 259 303-581 12-297 (343)
250 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.6E-37 1.9E-41 308.8 17.4 237 313-583 2-273 (274)
251 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.1E-36 4.6E-41 304.4 20.2 250 307-581 1-263 (267)
252 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-36 3.4E-41 305.5 19.2 254 307-581 1-263 (268)
253 cd08218 STKc_Nek1 Catalytic do 100.0 9.4E-37 2E-41 305.0 17.3 248 307-581 1-252 (256)
254 smart00219 TyrKc Tyrosine kina 100.0 2.1E-36 4.6E-41 302.4 19.4 250 308-583 1-258 (258)
255 cd07867 STKc_CDC2L6 Catalytic 100.0 2.8E-36 6.1E-41 311.6 20.8 200 311-516 6-220 (317)
256 cd05623 STKc_MRCK_alpha Cataly 100.0 1.6E-36 3.5E-41 315.6 18.7 254 306-582 1-266 (332)
257 cd05624 STKc_MRCK_beta Catalyt 100.0 5.4E-37 1.2E-41 318.9 15.1 253 306-581 1-265 (331)
258 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.7E-36 3.7E-41 308.5 18.4 252 306-581 1-261 (286)
259 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.7E-36 5.9E-41 304.1 19.6 253 313-584 2-267 (268)
260 KOG4279 Serine/threonine prote 100.0 2E-37 4.4E-42 320.8 11.4 243 313-581 582-831 (1226)
261 cd06626 STKc_MEKK4 Catalytic d 100.0 4.4E-36 9.6E-41 301.4 21.0 253 307-581 1-260 (264)
262 cd06611 STKc_SLK_like Catalyti 100.0 1E-36 2.2E-41 309.1 16.5 251 305-581 4-261 (280)
263 cd07839 STKc_CDK5 Catalytic do 100.0 6.4E-37 1.4E-41 311.3 14.7 263 307-581 1-280 (284)
264 cd06651 STKc_MEKK3 Catalytic d 100.0 3.4E-36 7.5E-41 303.0 19.8 250 306-581 2-260 (266)
265 cd05042 PTKc_Aatyk Catalytic d 100.0 2.1E-36 4.6E-41 304.9 18.2 253 313-584 2-268 (269)
266 cd07841 STKc_CDK7 Catalytic do 100.0 3.3E-36 7E-41 308.3 19.7 260 307-581 1-281 (298)
267 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.6E-37 1.4E-41 306.8 14.2 238 312-583 1-257 (258)
268 cd08220 STKc_Nek8 Catalytic do 100.0 3.7E-36 7.9E-41 300.5 19.6 247 307-581 1-252 (256)
269 KOG0596 Dual specificity; seri 100.0 5.3E-37 1.1E-41 312.1 13.4 251 305-581 360-626 (677)
270 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.5E-36 3.3E-41 308.7 16.7 264 306-581 1-282 (286)
271 cd05586 STKc_Sck1_like Catalyt 100.0 4.8E-37 1E-41 319.4 13.0 239 314-581 1-252 (330)
272 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.5E-36 5.3E-41 303.6 17.7 258 306-581 1-263 (267)
273 cd06632 STKc_MEKK1_plant Catal 100.0 4.6E-36 9.9E-41 300.1 19.1 246 307-581 1-254 (258)
274 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8.8E-36 1.9E-40 304.1 21.4 264 304-581 3-287 (291)
275 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.2E-36 9.1E-41 303.3 18.8 256 308-586 1-272 (273)
276 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.9E-36 6.3E-41 306.2 17.7 252 306-581 1-260 (283)
277 KOG0577 Serine/threonine prote 100.0 2.1E-37 4.6E-42 315.8 9.0 243 307-581 27-277 (948)
278 cd06641 STKc_MST3 Catalytic do 100.0 7.5E-36 1.6E-40 302.4 20.4 245 308-582 6-253 (277)
279 cd07860 STKc_CDK2_3 Catalytic 100.0 1.7E-36 3.7E-41 308.1 15.7 260 307-581 1-280 (284)
280 cd06647 STKc_PAK_I Catalytic d 100.0 7.9E-36 1.7E-40 304.8 20.5 249 306-582 19-269 (293)
281 cd06605 PKc_MAPKK Catalytic do 100.0 2.7E-36 5.8E-41 303.3 16.7 252 306-581 1-256 (265)
282 cd07844 STKc_PCTAIRE_like Cata 100.0 5.3E-36 1.1E-40 305.7 19.0 265 306-581 5-287 (291)
283 cd06623 PKc_MAPKK_plant_like C 100.0 7.6E-36 1.6E-40 299.6 19.7 251 306-582 1-256 (264)
284 cd06652 STKc_MEKK2 Catalytic d 100.0 7.3E-36 1.6E-40 300.4 19.6 250 306-581 2-260 (265)
285 KOG4717 Serine/threonine prote 100.0 1.9E-36 4.1E-41 304.5 14.2 246 306-581 18-269 (864)
286 cd06658 STKc_PAK5 Catalytic do 100.0 4E-36 8.6E-41 306.9 17.0 246 309-582 25-272 (292)
287 cd07832 STKc_CCRK Catalytic do 100.0 1.3E-35 2.8E-40 301.8 20.6 264 307-581 1-281 (286)
288 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.4E-36 2E-40 300.7 19.4 253 307-581 2-268 (272)
289 cd05580 STKc_PKA Catalytic dom 100.0 1.9E-35 4.1E-40 301.5 21.8 243 306-581 1-253 (290)
290 cd06917 STKc_NAK1_like Catalyt 100.0 1.1E-35 2.5E-40 300.9 19.9 246 307-581 2-254 (277)
291 KOG1025 Epidermal growth facto 100.0 1.4E-36 3E-41 320.4 13.2 254 309-589 699-960 (1177)
292 KOG0584 Serine/threonine prote 100.0 5.4E-37 1.2E-41 317.9 9.9 242 311-581 45-295 (632)
293 KOG0199 ACK and related non-re 100.0 9.3E-37 2E-41 316.6 11.7 249 311-584 115-370 (1039)
294 cd05609 STKc_MAST Catalytic do 100.0 4.2E-36 9E-41 308.7 16.3 257 306-585 1-273 (305)
295 cd06659 STKc_PAK6 Catalytic do 100.0 2.5E-36 5.4E-41 309.1 14.4 245 310-582 25-271 (297)
296 cd08225 STKc_Nek5 Catalytic do 100.0 6.1E-36 1.3E-40 299.1 16.7 248 307-581 1-253 (257)
297 cd07833 STKc_CDKL Catalytic do 100.0 1.7E-35 3.7E-40 301.2 20.1 266 306-581 1-284 (288)
298 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-35 3.9E-40 305.3 20.4 270 307-581 1-312 (316)
299 cd07843 STKc_CDC2L1 Catalytic 100.0 6.3E-36 1.4E-40 305.5 16.7 265 306-581 5-289 (293)
300 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-35 2.8E-40 302.1 18.7 252 304-581 17-269 (286)
301 cd07837 STKc_CdkB_plant Cataly 100.0 2.2E-35 4.7E-40 301.7 20.1 264 306-581 1-290 (295)
302 cd06607 STKc_TAO Catalytic dom 100.0 1.9E-35 4.1E-40 304.1 19.6 245 306-582 15-267 (307)
303 cd07835 STKc_CDK1_like Catalyt 100.0 9.6E-36 2.1E-40 302.4 16.6 260 308-581 1-279 (283)
304 cd08530 STKc_CNK2-like Catalyt 100.0 1E-35 2.2E-40 297.1 16.1 248 307-581 1-252 (256)
305 cd06648 STKc_PAK_II Catalytic 100.0 2.3E-35 4.9E-40 300.2 18.4 246 308-581 21-268 (285)
306 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-35 3.5E-40 300.8 17.3 266 307-581 1-280 (284)
307 cd07865 STKc_CDK9 Catalytic do 100.0 3.3E-35 7.1E-40 302.4 19.7 262 305-581 11-306 (310)
308 PHA03210 serine/threonine kina 100.0 9.9E-36 2.2E-40 325.2 16.4 270 304-581 146-453 (501)
309 cd05633 STKc_GRK3 Catalytic do 100.0 2.3E-35 5E-40 299.2 17.8 241 313-582 1-255 (279)
310 cd05578 STKc_Yank1 Catalytic d 100.0 2.1E-35 4.6E-40 295.6 17.3 246 307-580 1-253 (258)
311 KOG4645 MAPKKK (MAP kinase kin 100.0 2.8E-37 6.1E-42 340.5 4.0 254 303-581 1232-1493(1509)
312 cd07850 STKc_JNK Catalytic dom 100.0 4.4E-35 9.5E-40 307.5 20.4 263 304-581 14-310 (353)
313 cd06606 STKc_MAPKKK Catalytic 100.0 6.7E-35 1.5E-39 291.2 20.4 250 307-581 1-256 (260)
314 cd07831 STKc_MOK Catalytic dom 100.0 4E-35 8.8E-40 297.5 18.9 260 308-581 1-278 (282)
315 PHA02882 putative serine/threo 100.0 4.2E-35 9.1E-40 299.6 19.2 258 306-583 12-293 (294)
316 cd06616 PKc_MKK4 Catalytic dom 100.0 1.4E-35 3.1E-40 302.0 15.6 253 307-582 5-267 (288)
317 cd05122 PKc_STE Catalytic doma 100.0 5.9E-35 1.3E-39 290.3 19.6 248 307-581 1-250 (253)
318 cd06635 STKc_TAO1 Catalytic do 100.0 6.4E-35 1.4E-39 301.6 20.5 248 308-587 27-282 (317)
319 cd08215 STKc_Nek Catalytic dom 100.0 5E-35 1.1E-39 292.1 19.0 250 307-581 1-254 (258)
320 cd07849 STKc_ERK1_2_like Catal 100.0 3.8E-35 8.2E-40 305.9 18.4 263 305-582 4-292 (336)
321 PHA03390 pk1 serine/threonine- 100.0 1.6E-34 3.4E-39 291.1 22.2 250 298-581 6-261 (267)
322 cd07840 STKc_CDK9_like Catalyt 100.0 4.6E-35 1E-39 297.6 18.4 262 308-581 1-283 (287)
323 cd07845 STKc_CDK10 Catalytic d 100.0 2.6E-35 5.5E-40 303.4 16.6 262 305-581 6-289 (309)
324 cd07855 STKc_ERK5 Catalytic do 100.0 5.3E-35 1.2E-39 304.5 18.9 264 305-581 4-293 (334)
325 cd05572 STKc_cGK_PKG Catalytic 100.0 4.6E-35 1E-39 293.9 17.7 241 314-581 1-251 (262)
326 PLN00009 cyclin-dependent kina 100.0 2E-35 4.3E-40 302.0 14.9 262 306-581 2-283 (294)
327 cd05577 STKc_GRK Catalytic dom 100.0 4.6E-35 9.9E-40 296.7 17.3 242 314-580 1-252 (277)
328 cd08226 PK_STRAD_beta Pseudoki 100.0 5.2E-35 1.1E-39 303.8 18.0 267 313-588 5-316 (328)
329 cd07830 STKc_MAK_like Catalyti 100.0 4.6E-35 1E-39 297.3 17.1 263 308-581 1-279 (283)
330 KOG0690 Serine/threonine prote 100.0 4.5E-36 9.7E-41 286.7 9.0 240 305-574 167-411 (516)
331 cd08216 PK_STRAD Pseudokinase 100.0 4.9E-35 1.1E-39 302.0 17.1 261 311-581 7-294 (314)
332 cd06627 STKc_Cdc7_like Catalyt 100.0 2.7E-34 6E-39 286.4 21.7 246 307-581 1-250 (254)
333 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.4E-34 2.9E-39 291.0 19.6 250 306-581 2-260 (264)
334 KOG0579 Ste20-like serine/thre 100.0 3.5E-36 7.6E-41 308.6 7.9 248 308-581 34-288 (1187)
335 cd05118 STKc_CMGC Catalytic do 100.0 1.7E-34 3.6E-39 293.0 19.7 263 308-581 1-279 (283)
336 cd07838 STKc_CDK4_6_like Catal 100.0 1.3E-34 2.8E-39 294.5 18.1 259 308-581 1-283 (287)
337 cd06657 STKc_PAK4 Catalytic do 100.0 5.3E-35 1.1E-39 298.5 15.3 243 311-581 25-269 (292)
338 KOG0986 G protein-coupled rece 100.0 3.1E-35 6.7E-40 292.5 12.8 247 306-577 185-436 (591)
339 KOG0586 Serine/threonine prote 100.0 3.2E-35 6.9E-40 304.5 13.3 247 304-581 54-305 (596)
340 cd05606 STKc_beta_ARK Catalyti 100.0 2.3E-34 4.9E-39 291.8 19.5 240 313-581 1-254 (278)
341 cd06618 PKc_MKK7 Catalytic dom 100.0 1.3E-34 2.9E-39 296.2 17.6 250 306-582 15-273 (296)
342 KOG4250 TANK binding protein k 100.0 5.3E-35 1.2E-39 306.6 14.5 270 308-588 15-312 (732)
343 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-34 2.3E-39 291.0 16.0 242 312-583 2-249 (260)
344 cd07864 STKc_CDK12 Catalytic d 100.0 1.9E-34 4.1E-39 295.8 18.2 263 303-581 4-298 (302)
345 cd06634 STKc_TAO2 Catalytic do 100.0 1.9E-34 4.2E-39 296.8 18.2 245 307-583 16-268 (308)
346 cd08222 STKc_Nek11 Catalytic d 100.0 1E-34 2.2E-39 291.1 15.3 249 307-581 1-256 (260)
347 cd05579 STKc_MAST_like Catalyt 100.0 8.5E-35 1.8E-39 291.8 14.7 247 314-584 1-256 (265)
348 cd05583 STKc_MSK_N N-terminal 100.0 1.5E-34 3.3E-39 294.5 16.8 254 307-585 1-266 (288)
349 cd05613 STKc_MSK1_N N-terminal 100.0 5.6E-34 1.2E-38 290.7 20.9 250 307-581 1-267 (290)
350 cd07852 STKc_MAPK15 Catalytic 100.0 2.5E-34 5.4E-39 299.8 18.6 268 304-582 5-295 (337)
351 KOG0604 MAP kinase-activated p 100.0 2.6E-35 5.5E-40 279.2 9.8 253 304-581 59-321 (400)
352 cd07866 STKc_BUR1 Catalytic do 100.0 2E-34 4.3E-39 296.7 17.2 266 305-581 7-307 (311)
353 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.7E-34 5.8E-39 299.5 18.1 268 305-586 4-297 (337)
354 cd06633 STKc_TAO3 Catalytic do 100.0 7.1E-34 1.5E-38 293.2 20.8 242 308-581 23-272 (313)
355 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.8E-34 8.2E-39 297.1 18.7 266 300-582 4-288 (328)
356 cd07879 STKc_p38delta_MAPK13 C 100.0 8.8E-34 1.9E-38 296.2 21.6 264 305-586 14-303 (342)
357 cd05581 STKc_PDK1 Catalytic do 100.0 1E-34 2.2E-39 294.0 13.9 250 306-581 1-276 (280)
358 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.3E-34 2E-38 296.1 21.5 262 303-581 12-297 (343)
359 KOG0983 Mitogen-activated prot 100.0 3.3E-35 7.2E-40 275.0 9.3 245 311-581 97-348 (391)
360 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.2E-34 2E-38 296.4 21.0 266 297-582 8-300 (345)
361 cd07829 STKc_CDK_like Catalyti 100.0 1.8E-34 4E-39 292.6 14.8 261 308-581 1-278 (282)
362 PTZ00024 cyclin-dependent prot 100.0 2.5E-34 5.5E-39 299.5 16.2 263 306-581 8-312 (335)
363 cd07857 STKc_MPK1 Catalytic do 100.0 8.7E-34 1.9E-38 295.1 20.1 266 307-581 1-291 (332)
364 KOG0666 Cyclin C-dependent kin 100.0 3.2E-35 7E-40 279.6 8.3 207 306-517 24-245 (438)
365 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-33 2.4E-38 294.0 20.2 270 307-586 1-295 (330)
366 KOG1035 eIF-2alpha kinase GCN2 100.0 9.3E-35 2E-39 319.4 12.6 257 302-581 475-870 (1351)
367 cd07851 STKc_p38 Catalytic dom 100.0 5.3E-34 1.2E-38 298.0 16.0 261 304-581 13-297 (343)
368 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.9E-34 1.3E-38 297.5 16.2 263 306-581 5-299 (342)
369 KOG0607 MAP kinase-interacting 100.0 3.3E-34 7.2E-39 273.5 12.8 266 297-581 74-360 (463)
370 KOG0612 Rho-associated, coiled 100.0 1.1E-34 2.3E-39 316.5 9.4 256 298-579 67-335 (1317)
371 KOG0671 LAMMER dual specificit 100.0 5.5E-35 1.2E-39 286.3 6.1 264 305-581 88-405 (415)
372 KOG0200 Fibroblast/platelet-de 100.0 2.8E-33 6.2E-38 310.6 18.5 263 305-588 295-581 (609)
373 cd05123 STKc_AGC Catalytic dom 100.0 6.7E-33 1.5E-37 275.9 19.1 235 314-578 1-240 (250)
374 KOG0587 Traf2- and Nck-interac 100.0 4E-33 8.6E-38 297.8 15.2 259 298-581 11-281 (953)
375 cd05610 STKc_MASTL Catalytic d 100.0 6.2E-33 1.3E-37 312.5 17.3 144 306-456 4-152 (669)
376 cd05576 STKc_RPK118_like Catal 100.0 7.4E-33 1.6E-37 273.8 15.8 222 317-579 4-226 (237)
377 KOG0669 Cyclin T-dependent kin 100.0 1.1E-34 2.5E-39 268.4 2.1 268 306-581 17-314 (376)
378 KOG0603 Ribosomal protein S6 k 100.0 1.9E-33 4.1E-38 292.9 11.1 240 304-581 320-562 (612)
379 KOG0696 Serine/threonine prote 100.0 1E-33 2.2E-38 278.2 7.0 239 306-574 349-593 (683)
380 KOG1006 Mitogen-activated prot 100.0 1.4E-34 3E-39 269.9 -0.8 251 311-581 69-326 (361)
381 KOG0662 Cyclin-dependent kinas 100.0 7.2E-33 1.6E-37 244.1 9.2 260 307-581 3-282 (292)
382 PLN03225 Serine/threonine-prot 100.0 1.1E-31 2.4E-36 295.1 18.4 265 304-581 130-449 (566)
383 KOG1151 Tousled-like protein k 100.0 1.2E-32 2.5E-37 272.8 9.3 257 306-581 463-740 (775)
384 KOG4236 Serine/threonine prote 100.0 5.9E-33 1.3E-37 280.0 6.9 263 311-601 569-853 (888)
385 KOG0614 cGMP-dependent protein 100.0 3E-33 6.4E-38 281.5 3.3 239 308-575 422-665 (732)
386 KOG0608 Warts/lats-like serine 100.0 8.5E-32 1.8E-36 276.9 13.5 216 307-530 630-888 (1034)
387 KOG1024 Receptor-like protein 100.0 1.9E-32 4.1E-37 268.0 8.2 271 296-589 274-558 (563)
388 smart00220 S_TKc Serine/Threon 100.0 3.7E-31 8.1E-36 261.1 17.2 237 318-581 1-240 (244)
389 PLN03224 probable serine/threo 100.0 6.2E-31 1.3E-35 282.1 18.5 262 304-581 143-499 (507)
390 KOG0984 Mitogen-activated prot 100.0 4.1E-32 8.9E-37 244.7 6.2 202 306-515 46-255 (282)
391 KOG0695 Serine/threonine prote 100.0 3.5E-31 7.5E-36 254.1 12.8 200 305-515 249-454 (593)
392 KOG1290 Serine/threonine prote 100.0 1.2E-30 2.7E-35 262.2 16.4 132 305-441 77-221 (590)
393 KOG1027 Serine/threonine prote 100.0 1.5E-31 3.2E-36 284.5 8.4 247 308-580 511-765 (903)
394 KOG0664 Nemo-like MAPK-related 100.0 4.4E-31 9.5E-36 247.1 2.2 261 311-584 58-345 (449)
395 KOG1345 Serine/threonine kinas 100.0 6E-30 1.3E-34 239.6 8.0 258 306-589 24-291 (378)
396 KOG1152 Signal transduction se 100.0 7.4E-30 1.6E-34 260.8 9.1 195 306-513 561-770 (772)
397 cd00180 PKc Catalytic domain o 100.0 2.8E-28 6E-33 234.6 18.9 209 314-582 1-214 (215)
398 KOG0668 Casein kinase II, alph 100.0 1.5E-29 3.2E-34 231.5 8.4 195 305-516 37-237 (338)
399 KOG0670 U4/U6-associated splic 100.0 1.5E-29 3.2E-34 255.6 3.9 202 305-517 431-640 (752)
400 KOG0665 Jun-N-terminal kinase 100.0 1.8E-28 3.8E-33 235.3 8.9 254 305-581 16-309 (369)
401 smart00221 STYKc Protein kinas 99.9 3.9E-27 8.4E-32 230.0 17.6 198 308-514 1-202 (225)
402 KOG0576 Mitogen-activated prot 99.9 1.8E-28 3.9E-33 254.7 6.6 251 305-580 14-269 (829)
403 KOG1167 Serine/threonine prote 99.9 2E-27 4.3E-32 236.5 8.9 205 301-516 31-282 (418)
404 PLN00181 protein SPA1-RELATED; 99.9 5.4E-27 1.2E-31 270.7 7.7 198 357-581 28-264 (793)
405 smart00750 KIND kinase non-cat 99.9 1.9E-25 4.2E-30 210.0 12.6 169 386-588 1-171 (176)
406 KOG1165 Casein kinase (serine/ 99.9 1E-24 2.2E-29 210.2 16.9 279 307-604 29-317 (449)
407 KOG1164 Casein kinase (serine/ 99.9 6.2E-24 1.3E-28 219.4 18.9 278 307-604 19-315 (322)
408 PRK09188 serine/threonine prot 99.9 9.6E-24 2.1E-28 217.5 15.6 178 302-496 14-210 (365)
409 PLN03150 hypothetical protein; 99.9 2.5E-23 5.3E-28 231.7 13.6 168 31-224 368-539 (623)
410 KOG0195 Integrin-linked kinase 99.9 6.3E-24 1.4E-28 199.2 4.6 243 312-586 196-446 (448)
411 KOG1163 Casein kinase (serine/ 99.9 3.2E-23 6.9E-28 191.5 8.2 205 305-517 14-226 (341)
412 COG0515 SPS1 Serine/threonine 99.9 2.6E-21 5.6E-26 199.1 22.0 263 308-582 2-275 (384)
413 KOG0590 Checkpoint kinase and 99.9 1.9E-23 4.2E-28 229.2 5.5 253 309-581 321-584 (601)
414 PLN00113 leucine-rich repeat r 99.9 1E-21 2.2E-26 233.0 15.0 156 33-197 27-182 (968)
415 cd05147 RIO1_euk RIO kinase fa 99.9 1.6E-21 3.5E-26 184.9 11.8 139 311-459 2-168 (190)
416 KOG1240 Protein kinase contain 99.9 2.4E-22 5.2E-27 219.7 6.1 251 307-584 24-293 (1431)
417 PRK10359 lipopolysaccharide co 99.8 1.3E-21 2.8E-26 187.7 7.9 170 304-506 29-216 (232)
418 cd05145 RIO1_like RIO kinase f 99.8 1.2E-20 2.7E-25 179.5 14.5 140 311-460 2-169 (190)
419 PRK12274 serine/threonine prot 99.8 1.5E-20 3.2E-25 176.4 13.3 187 310-517 6-212 (218)
420 KOG1023 Natriuretic peptide re 99.8 6.7E-20 1.5E-24 192.2 11.8 219 355-589 1-227 (484)
421 KOG1166 Mitotic checkpoint ser 99.8 2.4E-19 5.2E-24 200.6 13.8 256 300-590 692-957 (974)
422 PF14531 Kinase-like: Kinase-l 99.8 1.6E-19 3.5E-24 178.4 8.0 232 308-573 14-288 (288)
423 KOG0603 Ribosomal protein S6 k 99.8 2.9E-20 6.4E-25 194.6 2.7 184 314-514 2-193 (612)
424 PRK10345 hypothetical protein; 99.8 1.9E-18 4.1E-23 165.4 12.9 136 308-455 4-156 (210)
425 smart00090 RIO RIO-like kinase 99.8 2.1E-18 4.6E-23 169.2 12.9 145 303-459 25-199 (237)
426 KOG4158 BRPK/PTEN-induced prot 99.8 1.8E-18 3.9E-23 170.8 10.9 200 359-584 274-512 (598)
427 cd05144 RIO2_C RIO kinase fami 99.7 1.4E-17 3E-22 159.8 13.2 145 299-460 8-177 (198)
428 PRK14879 serine/threonine prot 99.7 1.9E-17 4.1E-22 160.5 12.0 133 312-457 2-143 (211)
429 PRK09605 bifunctional UGMP fam 99.7 2.2E-17 4.7E-22 182.2 12.3 141 302-458 329-477 (535)
430 KOG0606 Microtubule-associated 99.7 4.1E-18 8.9E-23 186.9 6.2 210 306-574 83-304 (1205)
431 TIGR03724 arch_bud32 Kae1-asso 99.7 4.5E-17 9.7E-22 156.4 10.8 129 313-457 1-138 (199)
432 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.1E-17 2.4E-22 172.2 2.3 126 375-507 330-457 (516)
433 cd05120 APH_ChoK_like Aminogly 99.7 1.3E-15 2.7E-20 138.7 12.9 136 310-458 2-139 (155)
434 cd05119 RIO RIO kinase family, 99.6 4E-16 8.6E-21 148.2 9.2 136 311-460 2-166 (187)
435 PRK01723 3-deoxy-D-manno-octul 99.6 5.3E-15 1.2E-19 145.5 12.8 135 311-458 36-192 (239)
436 KOG0590 Checkpoint kinase and 99.6 2.4E-16 5.1E-21 173.5 2.1 253 306-580 20-284 (601)
437 KOG1266 Protein kinase [Signal 99.5 1.1E-14 2.4E-19 141.1 5.4 161 350-511 116-281 (458)
438 PLN03150 hypothetical protein; 99.5 1.7E-14 3.6E-19 161.1 7.7 93 107-200 419-511 (623)
439 TIGR01982 UbiB 2-polyprenylphe 99.5 3E-13 6.6E-18 144.5 12.4 141 311-460 122-309 (437)
440 KOG0617 Ras suppressor protein 99.4 1.2E-14 2.7E-19 128.2 -1.0 127 81-211 32-160 (264)
441 PRK04750 ubiB putative ubiquin 99.4 1.7E-12 3.6E-17 140.4 12.7 144 306-460 120-316 (537)
442 cd05151 ChoK Choline Kinase (C 99.4 1.5E-12 3.3E-17 121.3 10.4 131 311-457 3-136 (170)
443 KOG0601 Cyclin-dependent kinas 99.4 7.3E-13 1.6E-17 139.6 6.7 249 307-581 115-378 (524)
444 KOG0617 Ras suppressor protein 99.3 1.2E-13 2.6E-18 122.0 -2.9 130 81-214 78-212 (264)
445 cd05146 RIO3_euk RIO kinase fa 99.3 3.3E-11 7.1E-16 113.5 13.3 137 311-460 2-176 (197)
446 cd05154 ACAD10_11_like Acyl-Co 99.2 1.3E-10 2.8E-15 113.2 13.6 142 311-457 3-206 (223)
447 KOG0472 Leucine-rich repeat pr 99.2 4.5E-13 9.7E-18 133.2 -3.9 122 86-213 187-309 (565)
448 KOG0601 Cyclin-dependent kinas 99.2 1.2E-11 2.7E-16 130.4 4.9 248 303-585 262-517 (524)
449 KOG0444 Cytoskeletal regulator 99.2 2.9E-12 6.3E-17 133.5 0.1 109 81-192 102-235 (1255)
450 KOG1243 Protein kinase [Genera 99.2 2.9E-10 6.2E-15 121.2 14.4 165 327-508 34-199 (690)
451 KOG0472 Leucine-rich repeat pr 99.2 3.6E-12 7.7E-17 126.8 -0.8 127 83-213 389-540 (565)
452 COG3642 Mn2+-dependent serine/ 99.1 3.5E-10 7.5E-15 102.8 11.0 130 312-457 2-140 (204)
453 KOG3087 Serine/threonine prote 99.1 3.7E-10 8E-15 102.0 9.5 143 310-457 11-165 (229)
454 KOG0618 Serine/threonine phosp 99.1 8.4E-12 1.8E-16 136.0 -2.5 129 82-214 359-489 (1081)
455 KOG4237 Extracellular matrix p 99.0 1.4E-10 3.1E-15 115.5 4.7 88 130-217 273-362 (498)
456 KOG0444 Cytoskeletal regulator 99.0 2.1E-11 4.5E-16 127.3 -1.6 115 82-200 78-198 (1255)
457 KOG0606 Microtubule-associated 99.0 7.6E-11 1.6E-15 130.6 0.9 209 304-519 802-1042(1205)
458 KOG4194 Membrane glycoprotein 99.0 5.8E-11 1.3E-15 123.4 -1.0 134 82-217 317-455 (873)
459 PF01163 RIO1: RIO1 family; I 99.0 3.1E-09 6.8E-14 99.7 10.5 125 321-459 1-157 (188)
460 KOG0532 Leucine-rich repeat (L 99.0 2.4E-11 5.2E-16 126.0 -4.2 123 85-213 101-223 (722)
461 KOG4194 Membrane glycoprotein 99.0 5.8E-11 1.2E-15 123.4 -1.6 130 82-212 269-403 (873)
462 PRK15123 lipopolysaccharide co 98.9 1E-08 2.2E-13 102.1 13.6 140 312-457 28-194 (268)
463 PRK15370 E3 ubiquitin-protein 98.9 7.2E-09 1.6E-13 116.9 13.0 116 83-212 179-294 (754)
464 KOG3741 Poly(A) ribonuclease s 98.9 2.4E-08 5.3E-13 103.4 15.3 169 319-511 289-475 (655)
465 PF14580 LRR_9: Leucine-rich r 98.9 7.4E-10 1.6E-14 102.3 3.8 104 83-192 20-126 (175)
466 PF13855 LRR_8: Leucine rich r 98.9 1.4E-09 3.1E-14 82.5 3.7 61 106-167 1-61 (61)
467 COG4248 Uncharacterized protei 98.9 1.2E-07 2.7E-12 95.9 18.3 265 311-591 16-305 (637)
468 COG0478 RIO-like serine/threon 98.8 3.6E-08 7.9E-13 95.1 12.4 144 299-458 84-252 (304)
469 PRK15370 E3 ubiquitin-protein 98.8 4.9E-09 1.1E-13 118.3 7.2 99 82-193 199-297 (754)
470 PRK15387 E3 ubiquitin-protein 98.8 3.3E-09 7.2E-14 119.0 4.9 114 83-214 343-458 (788)
471 PRK15387 E3 ubiquitin-protein 98.8 1.7E-08 3.7E-13 113.3 9.4 37 83-124 223-259 (788)
472 PF14580 LRR_9: Leucine-rich r 98.8 3.6E-09 7.7E-14 97.8 3.3 107 102-213 15-125 (175)
473 PF13855 LRR_8: Leucine rich r 98.7 8.2E-09 1.8E-13 78.3 3.0 60 131-191 1-61 (61)
474 KOG0532 Leucine-rich repeat (L 98.7 2.3E-09 4.9E-14 111.6 -0.8 106 84-195 145-250 (722)
475 KOG0618 Serine/threonine phosp 98.7 3.4E-09 7.4E-14 116.1 -0.9 103 82-190 383-487 (1081)
476 KOG2137 Protein kinase [Signal 98.6 8.6E-09 1.9E-13 110.5 1.9 154 411-581 105-264 (700)
477 PLN03210 Resistant to P. syrin 98.6 8.5E-08 1.8E-12 115.3 9.7 125 82-211 611-735 (1153)
478 PRK09902 hypothetical protein; 98.6 4.7E-07 1E-11 85.6 11.7 137 314-457 26-179 (216)
479 COG1718 RIO1 Serine/threonine 98.6 1.2E-06 2.7E-11 83.8 13.8 155 293-459 32-217 (268)
480 PLN03210 Resistant to P. syrin 98.6 2E-07 4.4E-12 112.1 10.4 128 82-214 589-717 (1153)
481 PF08263 LRRNT_2: Leucine rich 98.6 5.2E-08 1.1E-12 67.8 3.2 41 34-77 2-43 (43)
482 PF06293 Kdo: Lipopolysacchari 98.5 3.7E-07 8E-12 87.9 10.0 107 345-458 55-171 (206)
483 COG0661 AarF Predicted unusual 98.5 2.2E-07 4.8E-12 100.2 8.0 139 312-460 131-317 (517)
484 cd00116 LRR_RI Leucine-rich re 98.5 1E-08 2.2E-13 105.9 -2.3 131 81-212 80-232 (319)
485 cd00116 LRR_RI Leucine-rich re 98.5 2.8E-08 6E-13 102.6 -0.0 111 82-193 108-235 (319)
486 KOG1259 Nischarin, modulator o 98.5 3E-08 6.4E-13 95.7 -0.2 102 84-192 286-387 (490)
487 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 2.5E-06 5.4E-11 83.2 13.0 132 312-456 7-181 (226)
488 KOG1259 Nischarin, modulator o 98.4 5.7E-08 1.2E-12 93.8 0.8 119 71-196 293-416 (490)
489 COG4886 Leucine-rich repeat (L 98.4 1.3E-07 2.8E-12 100.9 3.4 103 83-190 117-220 (394)
490 KOG4579 Leucine-rich repeat (L 98.4 2.9E-08 6.3E-13 85.2 -1.6 102 86-191 31-135 (177)
491 KOG4579 Leucine-rich repeat (L 98.4 1.4E-08 2.9E-13 87.2 -3.7 112 81-197 52-164 (177)
492 PF06176 WaaY: Lipopolysacchar 98.4 2.8E-06 6.1E-11 80.6 10.6 137 304-457 29-183 (229)
493 COG4886 Leucine-rich repeat (L 98.3 2.1E-07 4.5E-12 99.3 1.8 124 83-212 141-266 (394)
494 PF01636 APH: Phosphotransfera 98.2 8.2E-06 1.8E-10 79.9 11.6 144 311-456 2-196 (239)
495 KOG1859 Leucine-rich repeat pr 98.2 2.5E-08 5.4E-13 106.6 -6.8 128 82-217 164-295 (1096)
496 PF12799 LRR_4: Leucine Rich r 98.2 9.1E-07 2E-11 61.7 2.4 36 132-168 2-37 (44)
497 KOG0576 Mitogen-activated prot 98.2 2.7E-07 5.9E-12 98.1 -1.0 184 310-513 246-431 (829)
498 cd05150 APH Aminoglycoside 3'- 98.2 1.7E-05 3.6E-10 78.6 11.7 140 314-456 6-192 (244)
499 KOG1235 Predicted unusual prot 98.1 1.2E-05 2.6E-10 86.6 9.7 140 311-460 166-357 (538)
500 PF12799 LRR_4: Leucine Rich r 98.1 3E-06 6.4E-11 59.1 3.2 40 106-148 1-40 (44)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-61 Score=573.01 Aligned_cols=471 Identities=30% Similarity=0.543 Sum_probs=360.4
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|+++|.+|..+.++++|+.|+|++|++.|.+|..+.. +++|++|+|++|.++|.+|..++++++|+.|+
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSS-CKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcC-ccCCCEEECCCCcccccCChhHhCcccCCEEE
Confidence 56889999999999999999999999999999999999999999876 99999999999999999999999999999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCCCCCCCCC----CCCCCCCCCCchhHHHH
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNSGLCGKPL----NPCPGVPKKSRAGIIAA 236 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~~~c~~~~----~~C~~~~~~~~~~~ii~ 236 (618)
|++|+++|.+|..+..+++|+.|++++|+++|.+|.... ..+....+.+|+.+|+.+. ++|...........+++
T Consensus 554 Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~ 633 (968)
T PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYIT 633 (968)
T ss_pred CCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehh
Confidence 999999999999999999999999999999999997543 2567788999999998642 56754222222222222
Q ss_pred HhhhhhHHHHHHHHhhheeeeecceecccCCCCCCcccchhccCCCcceeeeecc-cccccCHHHHHHhhccCCCCcEEe
Q 007088 237 AAAAGVTFTALVVGIFLFCFMRGVYVKKKEDDPEGNKWAKRIKGTKGIKVSAFEK-SVEKMRLSDLMKATNSFSKNNIIG 315 (618)
Q Consensus 237 ~v~~~v~~~~lvv~ii~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~y~~~~~lG 315 (618)
++++++ +++++++++++++++++..+.++.+.....|. ...+.. ....++++++. ..|...+.||
T Consensus 634 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~---~~~~~~~~ig 699 (968)
T PLN00113 634 CTLGAF-LVLALVAFGFVFIRGRNNLELKRVENEDGTWE----------LQFFDSKVSKSITINDIL---SSLKEENVIS 699 (968)
T ss_pred HHHHHH-HHHHHHHHHHHHHHhhhccccccccccccccc----------ccccccccchhhhHHHHH---hhCCcccEEc
Confidence 222222 22222222222222221111111110001111 111111 11234444443 4577888999
Q ss_pred ecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCccccccCC
Q 007088 316 TGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHP 394 (618)
Q Consensus 316 ~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 394 (618)
+|+||.||+|+. .++..||+|+++...... ..|++.+++++|||||+++++|.+++..++||||+++|+|.++++
T Consensus 700 ~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~- 775 (968)
T PLN00113 700 RGKKGASYKGKSIKNGMQFVVKEINDVNSIP---SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR- 775 (968)
T ss_pred cCCCeeEEEEEECCCCcEEEEEEccCCcccc---HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh-
Confidence 999999999995 678999999987543222 356889999999999999999999999999999999999999984
Q ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCC
Q 007088 395 AEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474 (618)
Q Consensus 395 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~g 474 (618)
.++|..+.+|+.|+++||+|||+.+.++|+||||||+||+++.++.+++. ||.+....... ...+
T Consensus 776 ------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~--------~~~~ 840 (968)
T PLN00113 776 ------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT--------KCFI 840 (968)
T ss_pred ------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC--------Cccc
Confidence 27899999999999999999997666699999999999999999888875 66554322111 1237
Q ss_pred cccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCC--CCH
Q 007088 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGN--GFD 552 (618)
Q Consensus 475 t~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~--~~~ 552 (618)
|+.|+|||++.+..++.++|||||||++|||+||+.||+... .....+.+|.............+|+.+... ...
T Consensus 841 t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (968)
T PLN00113 841 SSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF---GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ 917 (968)
T ss_pred cccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc---CCCCcHHHHHHHhcCccchhheeCccccCCCCccH
Confidence 899999999999999999999999999999999999995432 223457777776555555555666655332 245
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 553 GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 553 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
++..++.+++.+|++.||++||+|+||++.|+++.+.
T Consensus 918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 6777889999999999999999999999999998663
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-55 Score=456.12 Aligned_cols=291 Identities=47% Similarity=0.761 Sum_probs=255.9
Q ss_pred cccccCHHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccC-HHHHHHHHHHHhcCCCCCccceeEEE
Q 007088 292 SVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHS-EKEFLSEINTLGSVRHRNLVPLLGFC 370 (618)
Q Consensus 292 ~~~~~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~ 370 (618)
....|++.|+..||++|+..++||+|+||.||+|.+++|+.||||++...... .++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999998776554 67799999999999999999999999
Q ss_pred EeCC-eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEE
Q 007088 371 VAKK-ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 371 ~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
.+.+ +.+|||||+++|+|.++|+..... +++|.+|++||.++|+||+|||+.+.|+|+||||||+|||+|+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9998 599999999999999999986643 7999999999999999999999999889999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
+|||+|+............. .||.+|+|||++..+..+.|+|||||||+++|++||+.|.+.... .....+..|.
T Consensus 219 sDFGLa~~~~~~~~~~~~~~---~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~--~~~~~l~~w~ 293 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTSVSTTV---MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP--RGELSLVEWA 293 (361)
T ss_pred cCccCcccCCccccceeeec---CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC--cccccHHHHH
Confidence 99999976543111111110 489999999999999999999999999999999999998876542 2233489999
Q ss_pred HHHhcCCccchhcccccc-CCCCH-HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 530 TLLNTNSSLETAIDKSLL-GNGFD-GELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
........+.+++|+.+. ..... +++.++.+++.+|++.+|++||+|.||+++|+.+...
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 888888899999999987 55544 6899999999999999999999999999999766543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-47 Score=391.81 Aligned_cols=256 Identities=30% Similarity=0.447 Sum_probs=211.3
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccC---HHHHHHHHHHHhcCCCCCccceeEEEEeCC-eeEEEEeecCCC
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHS---EKEFLSEINTLGSVRHRNLVPLLGFCVAKK-ERLLVYSYLENG 386 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~~~~g 386 (618)
.+.||+|+||+||+|.+.+...||||++...... .++|.+|+.+|.+++|||||+++|+|.++. ..++||||+++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4569999999999999977666999999764422 568999999999999999999999999987 789999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC-ceecCCCCCCeeeCCCC-ceEEcccCcccccCCCCCc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR-IIHRNISSKCILLDGDF-EPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~~~~ 464 (618)
+|.++++... ...+++..+++++.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++........
T Consensus 126 sL~~~l~~~~--~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~ 200 (362)
T KOG0192|consen 126 SLSVLLHKKR--KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTS 200 (362)
T ss_pred cHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccccc
Confidence 9999998742 25699999999999999999999999 7 99999999999999997 9999999999876543211
Q ss_pred ccccccCCCCcccccCCCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPR--TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
.....||+.|||||++. ...|+.|+||||||+++|||+||+.||......+ .... . +
T Consensus 201 ----~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~-----~~~~---v---------~ 259 (362)
T KOG0192|consen 201 ----MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ-----VASA---V---------V 259 (362)
T ss_pred ----ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH-----HHHH---H---------H
Confidence 11234999999999999 5699999999999999999999999998754311 1111 1 1
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
....+...+......+..++.+||..||..||++.|++..|+.+...+..
T Consensus 260 ~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 260 VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 11111222233566788888899999999999999999999999886654
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-47 Score=371.88 Aligned_cols=255 Identities=27% Similarity=0.433 Sum_probs=207.2
Q ss_pred ccCHHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEecc--CccCHHHHHHHHHHHhcCCCCCccceeEEEE
Q 007088 295 KMRLSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLED--SQHSEKEFLSEINTLGSVRHRNLVPLLGFCV 371 (618)
Q Consensus 295 ~~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 371 (618)
..+++|+++ .+.||+|..|+||++.+ .+++.+|+|.+.. +....+++.+|++++++++||+||++||.|.
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 345566655 67899999999999995 5789999999943 3456788999999999999999999999999
Q ss_pred eCC-eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCCceEE
Q 007088 372 AKK-ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 372 ~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
.+. ...++||||++|+|++++...+ .+++...-+|+.++++||.|||+ + +||||||||+|||++..|++||
T Consensus 148 ~~~~~isI~mEYMDgGSLd~~~k~~g----~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKi 220 (364)
T KOG0581|consen 148 SNGEEISICMEYMDGGSLDDILKRVG----RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKI 220 (364)
T ss_pred eCCceEEeehhhcCCCCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEe
Confidence 999 5999999999999999997664 38999999999999999999996 6 9999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
+|||.++.+... ...+.+||..|||||.+.+..|+.++||||||+.++|+.+|+.||...... .....+.+
T Consensus 221 cDFGVS~~lvnS------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~---~~~~~~Ll 291 (364)
T KOG0581|consen 221 CDFGVSGILVNS------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP---YLDIFELL 291 (364)
T ss_pred ccccccHHhhhh------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC---CCCHHHHH
Confidence 999999887653 233455999999999999999999999999999999999999999764211 11222222
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.....+. .+.+....++++ +..++..||++||.+||+++|+++
T Consensus 292 ~~Iv~~p------pP~lP~~~fS~e---f~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 292 CAIVDEP------PPRLPEGEFSPE---FRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHhcCC------CCCCCcccCCHH---HHHHHHHHhcCCcccCCCHHHHhc
Confidence 2222111 122322234444 555555999999999999999975
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-47 Score=390.11 Aligned_cols=246 Identities=22% Similarity=0.321 Sum_probs=208.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEecc----CccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLED----SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.+|...+.||+|||+.||.++. ..|..||+|++.+ .....+.+.+|+++.++|+|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999999996 8999999999976 3456678999999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
|+|+.|+|.++++.+ .++++.++..+++||+.||.|||++ +|+|||||..|+|++++.++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~Krr----k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR----KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHHhc----CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 999999999999844 4699999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.+....+ .+|||.|+|||++.....+..+||||+||+||.|++|++||+...- .+-....... +
T Consensus 171 ~~Erk~T----lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v--------kety~~Ik~~----~ 234 (592)
T KOG0575|consen 171 DGERKKT----LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV--------KETYNKIKLN----E 234 (592)
T ss_pred cccccce----ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH--------HHHHHHHHhc----C
Confidence 5444333 4599999999999999999999999999999999999999986432 2222111111 1
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..- +........+||.++|+.||.+|||+++|+.
T Consensus 235 Y~~-------P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 235 YSM-------PSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ccc-------ccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 1122234455666999999999999999975
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-46 Score=370.77 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=202.7
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc--------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ--------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
.+.|.+.+.||+|+||.|-+|. ..+|+.||||++++.. .....+++|+++|++++|||||+++++|..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3467888999999999999999 6789999999997532 122346799999999999999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC---CceEEccc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD---FEPKLSDF 452 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Df 452 (618)
.||||||++||+|.+.+-.++. +.+...+.+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~----l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY----LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc----cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999999977654 77888899999999999999999 99999999999999766 77999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCC---CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVA---TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
|+|+..+. ...+...+||+.|.|||++.+..+ ..++|+||+||+||-+++|.+||....... .+.+.+
T Consensus 324 GlAK~~g~-----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~----sl~eQI 394 (475)
T KOG0615|consen 324 GLAKVSGE-----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP----SLKEQI 394 (475)
T ss_pred chhhcccc-----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc----cHHHHH
Confidence 99998753 234556679999999999876543 348899999999999999999998643321 122221
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .++.. .....+.+...+.+++|.+||..||++|||+.|+++
T Consensus 395 ~----~G~y~------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 395 L----KGRYA------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred h----cCccc------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 1 11110 001123445566777777999999999999999976
No 7
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-46 Score=382.26 Aligned_cols=253 Identities=28% Similarity=0.453 Sum_probs=216.1
Q ss_pred CCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCccc
Q 007088 310 KNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389 (618)
Q Consensus 310 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 389 (618)
..+.||+|.||.||.|.+++...||+|.++......++|.+|+++|++|+|+|||+++++|..++..+||||||+.|+|.
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence 35789999999999999988889999999988788889999999999999999999999999988999999999999999
Q ss_pred cccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccc
Q 007088 390 DKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469 (618)
Q Consensus 390 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 469 (618)
++|..... ..+...+.+.++.|||+|++||+++ ++|||||.++|||++++..+||+|||+|+...+......
T Consensus 290 ~yLr~~~~--~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~--- 361 (468)
T KOG0197|consen 290 DYLRTREG--GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS--- 361 (468)
T ss_pred HHhhhcCC--CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceeec---
Confidence 99987433 5689999999999999999999999 999999999999999999999999999996544332221
Q ss_pred cCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 470 ~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
.+..-+..|.|||.+..++++.|||||||||+||||+| |+.||..... .+.+.. ++...+.
T Consensus 362 ~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--------~ev~~~----------le~GyRl 423 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--------EEVLEL----------LERGYRL 423 (468)
T ss_pred CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--------HHHHHH----------HhccCcC
Confidence 12224678999999999999999999999999999999 8888875432 222222 2333333
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
..+..++..+.+|+..||+.+|++|||++.+...|+++..
T Consensus 424 p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 424 PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 4456677888899999999999999999999998888754
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-45 Score=362.47 Aligned_cols=200 Identities=28% Similarity=0.407 Sum_probs=179.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
..+|...+.||+|+||+||+|++ +++..||||.+.... ...+.+..|+.+|+.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 45788888999999999999994 568999999996543 44566789999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC------CceEEcccCc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD------FEPKLSDFGL 454 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------~~~kl~DfG~ 454 (618)
|||.||+|.+|++..+. +++..++.++.|||.||++||++ +||||||||+||||+.. -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~~~~~----l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRGR----LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999987754 99999999999999999999999 99999999999999764 4589999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
|+.+.... .....+|++.|||||++..++|+.|+|+||+|+|+|++++|+.||+...
T Consensus 162 AR~L~~~~-----~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 162 ARFLQPGS-----MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhhCCchh-----HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 99987432 2234569999999999999999999999999999999999999998644
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-47 Score=355.77 Aligned_cols=257 Identities=21% Similarity=0.310 Sum_probs=207.5
Q ss_pred cCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeE-EEEeCCe-eEEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLG-FCVAKKE-RLLVY 380 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lV~ 380 (618)
+|.+.++||+|.||+||++. +.+|..||.|.++-.. ...+++..|+.+|++++|||||++++ .+.++.+ .++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 47778899999999999999 7899999999997533 44566889999999999999999998 4555555 78999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR--IIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|||..|+|.+.++..+.....+++..+++++.|+++||.++|++.. + |+||||||.||+++.+|.+||+|||+++.+
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~-r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIP-RGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccc-ccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999998766666789999999999999999999999432 4 999999999999999999999999999988
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
...... ..+.+|||.||+||.+.+.+|+.||||||+||++|||..-++||...+ +.+..+.... ++.
T Consensus 179 ~s~~tf----A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--------~~~L~~KI~q-gd~ 245 (375)
T KOG0591|consen 179 SSKTTF----AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--------LLSLCKKIEQ-GDY 245 (375)
T ss_pred cchhHH----HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--------HHHHHHHHHc-CCC
Confidence 754433 334559999999999999999999999999999999999999998742 2221111111 111
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
+.+.. .-...++..|+..|+..||+.||+...++..+..
T Consensus 246 -----~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 -----PPLPD---EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----CCCcH---HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 01111 3355677777889999999999996555555444
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=352.50 Aligned_cols=241 Identities=23% Similarity=0.300 Sum_probs=200.1
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|++.+.||+|+||.||.++ .++++.+|+|++++.. ...+...+|..+|.+++||.||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4579999999999999999999 4568999999998743 3456688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
+||+.||.|+.+|+..+. +++..+.-++..|+.||.|||++ +||||||||+|||+|.+|+++|+|||+++..-
T Consensus 104 ld~~~GGeLf~hL~~eg~----F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR----FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHHHhcCC----cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999987654 99999999999999999999999 99999999999999999999999999998644
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...... ...+||+.|||||++.+..|+.++|.||+|+++|||++|.+||...+. .++........
T Consensus 177 ~~~~~t----~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--------~~~~~~I~~~k--- 241 (357)
T KOG0598|consen 177 KDGDAT----RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--------KKMYDKILKGK--- 241 (357)
T ss_pred cCCCcc----ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH--------HHHHHHHhcCc---
Confidence 332222 235699999999999999999999999999999999999999986442 33333332221
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH 574 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 574 (618)
........+.+..++++ +.+..||++|-
T Consensus 242 ----~~~~p~~ls~~ardll~---~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 ----LPLPPGYLSEEARDLLK---KLLKRDPRQRL 269 (357)
T ss_pred ----CCCCCccCCHHHHHHHH---HHhccCHHHhc
Confidence 01112223445554444 99999999995
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.9e-44 Score=340.35 Aligned_cols=264 Identities=22% Similarity=0.303 Sum_probs=206.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccC---HHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHS---EKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
+.|+...++|+|+||.||+++. ++|+.||||++..++.+ .+-..+|+++|++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 4688889999999999999994 56999999999775532 3456899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
||+. ++.+-+.... ..++...+.+++.|++.|+.|+|++ +++||||||+|||++.+|.+||+|||+|+.+...
T Consensus 82 ~~dh-TvL~eLe~~p---~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP---NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecch-HHHHHHHhcc---CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 9987 5555555444 3488999999999999999999999 9999999999999999999999999999988743
Q ss_pred CCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc-------cCHHHHHHHHh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK-------GSLVEWITLLN 533 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~-------~~l~~~~~~~~ 533 (618)
....+. .+.|..|+|||.+.+ .+|+..+||||+||++.||++|.+.|.+.++-+... ..+.+....+.
T Consensus 155 gd~YTD----YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 155 GDNYTD----YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred cchhhh----hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 333333 347999999999877 789999999999999999999999987765432211 11112222222
Q ss_pred cCCccchhccccc-----cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 007088 534 TNSSLETAIDKSL-----LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVY 580 (618)
Q Consensus 534 ~~~~~~~~~d~~l-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 580 (618)
.+.....+.-+.. ..........-+++++..||+.||.+|++.+|++
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 2222222211111 1122333445788899999999999999999986
No 12
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-44 Score=358.06 Aligned_cols=266 Identities=20% Similarity=0.270 Sum_probs=208.1
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHH--HHHHHHHhcCC-CCCccceeEEEEeCC-eeEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEF--LSEINTLGSVR-HRNLVPLLGFCVAKK-ERLL 378 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~--~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~l 378 (618)
..++|...++||.|.||.||+|+ ...|..||||++++.-...++. .+|+..|++++ ||||+++.+++.+.+ ..++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 34678889999999999999999 6779999999998755444443 68999999998 999999999999988 8999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|||||+. +|.++++.+. ..+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+..
T Consensus 88 VfE~Md~-NLYqLmK~R~---r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDRN---RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eHHhhhh-hHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 9999976 9999998874 6899999999999999999999999 9999999999999998889999999999987
Q ss_pred CCCCCcccccccCCCCcccccCCCCC-CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYP-RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
...... ...+.|..|+|||++ ..+.|+.+.|+||+|||++|+.+-++.|.+.++.+.... +.+.........+
T Consensus 161 ~SkpPY-----TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~K-Ic~VLGtP~~~~~ 234 (538)
T KOG0661|consen 161 RSKPPY-----TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYK-ICEVLGTPDKDSW 234 (538)
T ss_pred ccCCCc-----chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHH-HHHHhCCCccccc
Confidence 654332 233479999999975 467899999999999999999999999987654322111 0111000000100
Q ss_pred -----cchhcc---ccccC----CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 538 -----LETAID---KSLLG----NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 538 -----~~~~~d---~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
+...+. +...+ ........+.++++.+|+++||.+|||++|+++.
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 001111 00001 1122356678888889999999999999999864
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-43 Score=357.09 Aligned_cols=253 Identities=25% Similarity=0.331 Sum_probs=205.5
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCe
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 375 (618)
.+..++|...+.||+|+|++|++|+ ...++.||||++.+.. ...+-+..|-++|.+| .||.|++++..|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3445678889999999999999999 5679999999996632 3334577888999999 89999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.|+|+||+++|+|.++|++.+. +++.....++.+|+.||+|||++ |||||||||+|||+|+++++||+|||.|
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs----fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS----FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc----chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccc
Confidence 9999999999999999988754 99999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc-----cc----ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH
Q 007088 456 RLMNPVDTH-----LS----TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 456 ~~~~~~~~~-----~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~ 526 (618)
+.+.+.... .. ......+||..|.+||++.+...+..+|+|+||||+|+|+.|++||...++.-.+ .
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF----q 297 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF----Q 297 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH----H
Confidence 988653322 11 1112356999999999999999999999999999999999999999875532111 1
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVY 580 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 580 (618)
+... ++-. .+...+....+|+.+.|..||.+|+|++||-
T Consensus 298 kI~~-----------l~y~----fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk 336 (604)
T KOG0592|consen 298 KIQA-----------LDYE----FPEGFPEDARDLIKKLLVRDPSDRLTSQQIK 336 (604)
T ss_pred HHHH-----------hccc----CCCCCCHHHHHHHHHHHccCccccccHHHHh
Confidence 1000 1111 1122224556666699999999999996653
No 14
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-42 Score=324.51 Aligned_cols=282 Identities=21% Similarity=0.264 Sum_probs=215.2
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.+|...+++|+|.||.||+|+ ..+|+.||||+++..+. ......+|++.|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 468889999999999999999 67899999999976432 24567899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++. +|+..+++.. ..++..++..++.++++|++|+|++ .|+||||||.|+|++.+|.+||+|||+|+.+...
T Consensus 82 fm~t-dLe~vIkd~~---i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKN---IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhcccc---cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9987 9999998765 5799999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh---cCCc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN---TNSS 537 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~---~~~~ 537 (618)
....... +-|..|+|||.+.| +.|+...|+||.|||+.||+-|.+-|.+.++-+.. ......+- .+.|
T Consensus 155 ~~~~~~~----V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL----~~If~~LGTP~~~~W 226 (318)
T KOG0659|consen 155 NRIQTHQ----VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL----SKIFRALGTPTPDQW 226 (318)
T ss_pred Ccccccc----eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH----HHHHHHcCCCCcccC
Confidence 5443322 36899999998775 57999999999999999999998777665432211 11111000 0000
Q ss_pred -----cchh-----ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCCCC
Q 007088 538 -----LETA-----IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPSN 603 (618)
Q Consensus 538 -----~~~~-----~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~ 603 (618)
+.+. +..............+.++++..|+..||.+|++++|+++. ..+...-..+.....+.|..
T Consensus 227 P~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~-~yf~~~P~pt~~~~lp~p~~ 301 (318)
T KOG0659|consen 227 PEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH-PYFKSLPLPTPPSKLPIPST 301 (318)
T ss_pred ccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc-hhhhcCCCCCChhhCcCCcc
Confidence 0000 01111111234455667899999999999999999999764 23333233333444444444
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-43 Score=378.39 Aligned_cols=263 Identities=24% Similarity=0.364 Sum_probs=217.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
.+....+.||+|.||.||+|... +...||||.+++.. ...++|++|++++..++|||||+++|+|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 33445678999999999999943 35789999998754 35788999999999999999999999999999999
Q ss_pred EEEeecCCCccccccCCCCCC----------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 378 LVYSYLENGTLYDKLHPAEHE----------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
||+|||..|||.++|...... ..+++..+.+.||.|||.|+.||-++ .+|||||..+|+|+.++..+
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEE
Confidence 999999999999998754321 23488999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||+++..-..+..... ....-+.+|||||.+..+++|.+||||||||+|||+++ |+.||....+.+..
T Consensus 643 KIsDfGLsRdiYssDYYk~~--~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI----- 715 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVR--GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI----- 715 (774)
T ss_pred Eecccccchhhhhhhhhccc--CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH-----
Confidence 99999999976554433211 11224679999999999999999999999999999998 99999876543211
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
.....+. + -..++.++.++.+|+..||+.+|++||+++||-..|+.+.+...
T Consensus 716 ----e~i~~g~--------l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 716 ----ECIRAGQ--------L-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred ----HHHHcCC--------c-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 1111111 1 23456678899999999999999999999999999999876543
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-42 Score=341.31 Aligned_cols=263 Identities=22% Similarity=0.311 Sum_probs=209.0
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.+.|+..+.||.|..++||+|+ .+.+..||||++.-+. ...+.+++|+..|+.++||||++++..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 4678899999999999999999 6778999999996533 345789999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
||.+|++.+++...-. ..+++..+..|++++++||.|||++ |.||||||+.||||+.+|.+||+|||.+..+...
T Consensus 105 fMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999999976654 3499999999999999999999999 9999999999999999999999999988776554
Q ss_pred CCcccccccCCCCcccccCCCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPR--TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
............||+.|||||++. ...|+.|+||||||++..||.+|..||....+-. -....+.......
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk-------vLl~tLqn~pp~~ 252 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK-------VLLLTLQNDPPTL 252 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH-------HHHHHhcCCCCCc
Confidence 432222224557999999999854 3568999999999999999999999998643311 1111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. -..+..+......+.+.+++..||+.||++|||++++++
T Consensus 253 ~--t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 253 L--TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred c--cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0 001111112223457788888999999999999999874
No 17
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8e-43 Score=351.79 Aligned_cols=266 Identities=23% Similarity=0.286 Sum_probs=203.4
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 378 (618)
.+.|+.+++||+|.||.||+|+ ..+|+.||+|++..+. ....-..+|+.+|++|+||||+++.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3457778899999999999999 6789999999997543 3344568999999999999999999998877 68999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|+|||+. +|..++.... ..+++.++..+++|++.||+|+|++ ||+|||||.+|||||.+|.+||+|||+|+++
T Consensus 196 VFeYMdh-DL~GLl~~p~---vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG---VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEecccc-hhhhhhcCCC---cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 9999998 9998887654 4699999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
....... ...++-|..|+|||++.| ..|+.+.|+||.||||.||++|++.|....+.+....+. +.......+.|
T Consensus 269 ~~~~~~~---~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIf-klcGSP~e~~W 344 (560)
T KOG0600|consen 269 TPSGSAP---YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIF-KLCGSPTEDYW 344 (560)
T ss_pred cCCCCcc---cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHH-HHhCCCChhcc
Confidence 6544322 334557999999998776 479999999999999999999999998755422211110 00000000011
Q ss_pred c----c--hhcccccc-----CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 L----E--TAIDKSLL-----GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~----~--~~~d~~l~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. . ..+.+.-. .+.........++|+..+|..||.+|.|+.++++
T Consensus 345 ~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 345 PVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0 0 00000000 0001112345667788999999999999998864
No 18
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2e-43 Score=370.80 Aligned_cols=272 Identities=23% Similarity=0.372 Sum_probs=226.3
Q ss_pred ccccCHHHHHHhhccC---------CCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccC--ccCHHHHHHHHHHHhc
Q 007088 293 VEKMRLSDLMKATNSF---------SKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDS--QHSEKEFLSEINTLGS 357 (618)
Q Consensus 293 ~~~~~~~~l~~~~~~y---------~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~E~~~l~~ 357 (618)
.+.++++|-.+|...| .+.++||.|.||.||+|+++ ....||||.++.. +....+|+.|..+|.+
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ 686 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ 686 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc
Confidence 3456666655554444 45789999999999999954 2468999999874 3556789999999999
Q ss_pred CCCCCccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCC
Q 007088 358 VRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSK 437 (618)
Q Consensus 358 l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 437 (618)
++||||+++.|+.......++|.|||++|+|+.+|+.+.+ .+.+.+..-++++|+.|++||-+. ++|||||.++
T Consensus 687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG---qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAAR 760 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG---QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAAR 760 (996)
T ss_pred CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC---ceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhh
Confidence 9999999999999999999999999999999999988774 488999999999999999999999 9999999999
Q ss_pred CeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 007088 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTN 516 (618)
Q Consensus 438 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~ 516 (618)
|||++.+..+|++|||+++.+.+......+ ..+.--+.+|.|||.+...+++.+||||||||+|||.++ |.+||.+..
T Consensus 761 NILVNsnLvCKVsDFGLSRvledd~~~~yt-t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS 839 (996)
T KOG0196|consen 761 NILVNSNLVCKVSDFGLSRVLEDDPEAAYT-TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 839 (996)
T ss_pred heeeccceEEEeccccceeecccCCCcccc-ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc
Confidence 999999999999999999987654422222 122223579999999999999999999999999999887 999998754
Q ss_pred CCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 517 APESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 517 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
+. +....+....+-..+.+++..|.+|+..||++|-.+||.+.||+..|+++...
T Consensus 840 NQ------------------dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 840 NQ------------------DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred hH------------------HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 42 12233333444445667888999999999999999999999999999998654
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=352.83 Aligned_cols=247 Identities=30% Similarity=0.451 Sum_probs=204.9
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCH-HHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
..|....+||+|..|.||.|. ..+++.||||++....... +-+.+|+.+|+..+|+|||++++.|...++.|+||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 457778899999999999999 5678999999998765544 44789999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
+||+|.+.+.... +++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 353 ~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred CCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 9999999987654 89999999999999999999999 999999999999999999999999999988876555
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
...+ .+||+.|||||+.....|++|.||||||++++||+-|.+||...+. +.. ......++.
T Consensus 425 KR~T----mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P-------lrA-lyLIa~ng~------ 486 (550)
T KOG0578|consen 425 KRST----MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP-------LRA-LYLIATNGT------ 486 (550)
T ss_pred cccc----ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-------HHH-HHHHhhcCC------
Confidence 4443 3499999999999999999999999999999999999999975332 111 111111111
Q ss_pred cccc-CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 544 KSLL-GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 544 ~~l~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+. .+..+.+.++|++ +||..||++|+++.|+|+
T Consensus 487 P~lk~~~klS~~~kdFL~---~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 487 PKLKNPEKLSPELKDFLD---RCLVVDVEQRASAKELLE 522 (550)
T ss_pred CCcCCccccCHHHHHHHH---HHhhcchhcCCCHHHHhc
Confidence 1111 1123344455555 999999999999999986
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9e-42 Score=356.08 Aligned_cols=263 Identities=24% Similarity=0.370 Sum_probs=203.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC-
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK- 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~- 374 (618)
.++|.+.++||+|+||.||+|.. .++..||+|+++... ...+.+.+|+.++.++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46788999999999999999973 235789999997533 2345688999999999 8999999999987654
Q ss_pred eeEEEEeecCCCccccccCCCCCC--------------------------------------------------------
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHE-------------------------------------------------------- 398 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 398 (618)
..++||||+++|+|.+++......
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 578999999999999888643210
Q ss_pred --CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcc
Q 007088 399 --VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDL 476 (618)
Q Consensus 399 --~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~ 476 (618)
..++++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.......... .....++.
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~--~~~~~~~~ 240 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR--KGSARLPL 240 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhc--ccCCCCCc
Confidence 13488889999999999999999999 999999999999999999999999999986543221111 11223567
Q ss_pred cccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHH
Q 007088 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGEL 555 (618)
Q Consensus 477 ~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 555 (618)
.|+|||++.+..++.++|||||||++|||++ |..||......+ ....... ..... .......
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-------~~~~~~~-~~~~~---------~~~~~~~ 303 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-------EFCQRLK-DGTRM---------RAPENAT 303 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-------HHHHHHh-cCCCC---------CCCCCCC
Confidence 8999999999999999999999999999997 999997543211 1111111 11100 0111233
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 556 HQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 556 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 4677888899999999999999999999988653
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-42 Score=340.24 Aligned_cols=257 Identities=27% Similarity=0.400 Sum_probs=197.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC--eeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK--ERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~e 381 (618)
.++...+.||+|+||.||++... +|...|||...... ...+.+.+|+.+|.+++|||||+++|.....+ .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45667889999999999999954 59999999886542 11456899999999999999999999855554 5889999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-CCceEEcccCcccccCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLARLMNP 460 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~ 460 (618)
|+++|+|.+++...+. .+++..+.++..||++||+|||++ ||+||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred ccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 9999999999987653 499999999999999999999999 9999999999999999 79999999999987763
Q ss_pred CCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.. ..........||+.|||||++..+ ....++||||+||++.||+||++||... .....+.-........
T Consensus 171 ~~-~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-------~~~~~~~~~ig~~~~~- 241 (313)
T KOG0198|consen 171 KG-TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-------FEEAEALLLIGREDSL- 241 (313)
T ss_pred cc-ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-------cchHHHHHHHhccCCC-
Confidence 11 111111234599999999999853 3345999999999999999999999753 1111222111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
+.+ ....+++.+ +++.+|++.||++|||++|+++.---
T Consensus 242 ----P~i-p~~ls~~a~---~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 242 ----PEI-PDSLSDEAK---DFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred ----CCC-CcccCHHHH---HHHHHHhhcCcccCcCHHHHhhChhh
Confidence 111 111334444 45559999999999999999876543
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.7e-42 Score=349.52 Aligned_cols=245 Identities=25% Similarity=0.353 Sum_probs=206.5
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCH---HHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSE---KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|.+.+.||+|+||.||||+ ..+.+.||+|.+.+....+ +.+++|++++++++||||+.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 568888999999999999999 4568999999997765444 558899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+.| +|+.++...+. ++++.+..++.|++.||.|||+. +|+|||+||.|||++..+.+|++|||+|+-+...
T Consensus 82 ~a~g-~L~~il~~d~~----lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK----LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhh-hHHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 9977 99999987764 99999999999999999999999 9999999999999999999999999999987653
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.... ....||+-|||||+..++.|+..+|.||+|||+||+++|++||... .+.+.++....+..
T Consensus 154 t~vl----tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--------si~~Lv~~I~~d~v---- 217 (808)
T KOG0597|consen 154 TSVL----TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--------SITQLVKSILKDPV---- 217 (808)
T ss_pred ceee----eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--------HHHHHHHHHhcCCC----
Confidence 3222 2334999999999999999999999999999999999999999753 23333333322211
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..++.....+..++...|.+||.+|.+..+++.
T Consensus 218 -------~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 -------KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -------CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 112234456677777999999999999999864
No 23
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=324.43 Aligned_cols=198 Identities=25% Similarity=0.363 Sum_probs=179.3
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|+..+.||.|+||.|.+++ ..+|..+|+|++.+.. ...+...+|..+|+.+.||.++++++.+.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 457778999999999999999 4578999999997654 23455788999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||++||.|+.+++..+. +++..++-++.||+.||+|||+. +|++|||||+|||+|.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~~r----F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR----FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHHhcCC----CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999987654 99999999999999999999999 999999999999999999999999999998764
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
. + ...+||+.|+|||.+.+..+..++|.|||||++|||+.|.+||...+.
T Consensus 197 r-T------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 197 R-T------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred c-E------EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 3 1 234599999999999999999999999999999999999999987654
No 24
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-41 Score=348.21 Aligned_cols=254 Identities=23% Similarity=0.341 Sum_probs=205.2
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC----c--cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCe
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS----Q--HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKE 375 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 375 (618)
..++|...+.||+|+||.|+.|. ..++..||+|++... . ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45689999999999999999998 557899999977553 1 23456778999999999 9999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEcccCc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDFGL 454 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~ 454 (618)
.++||||+.||+|.+++... .++.+..+.+++.|++.|++|+|++ ||+||||||+|||+|.+ +++||+|||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~----g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNK----GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEEecCCccHHHHHHHc----CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 99999999999999999874 3488899999999999999999999 99999999999999999 9999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCC-CC-CccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV-AT-PKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
+......+ ......+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++.... .-....
T Consensus 168 s~~~~~~~----~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~--------~l~~ki 235 (370)
T KOG0583|consen 168 SAISPGED----GLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP--------NLYRKI 235 (370)
T ss_pred ccccCCCC----CcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH--------HHHHHH
Confidence 99874111 2233456999999999999877 75 7899999999999999999999873321 111111
Q ss_pred hcC-CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 533 NTN-SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 533 ~~~-~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
... -.+.. ... ..++..++.+|+..||.+|+++.||+ .-..+..
T Consensus 236 ~~~~~~~p~---------~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~~ 280 (370)
T KOG0583|consen 236 RKGEFKIPS---------YLL--SPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQK 280 (370)
T ss_pred hcCCccCCC---------CcC--CHHHHHHHHHHcCCCcccCCCHHHHh-hChhhcc
Confidence 110 01111 110 34566777799999999999999999 4444444
No 25
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.1e-41 Score=343.37 Aligned_cols=249 Identities=22% Similarity=0.275 Sum_probs=203.4
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
..++|+....||+|+||.||+|+ ..+|..+|+|+++++. ...+.++.|-.+|...++|.||+++..|.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 56789999999999999999999 5679999999998864 344668899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||++||++..+|...+ .|++..+..++.+++.|+..||+. |+|||||||+|+|||..|++||+|||++.-+
T Consensus 219 iMEylPGGD~mTLL~~~~----~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD----TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHhcC----cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 999999999999998765 499999999999999999999999 9999999999999999999999999999543
Q ss_pred CCC----------------------CCc-----cc----------------ccccCCCCcccccCCCCCCCCCCCCccch
Q 007088 459 NPV----------------------DTH-----LS----------------TFVNGEFGDLGYVAPEYPRTLVATPKGDV 495 (618)
Q Consensus 459 ~~~----------------------~~~-----~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDV 495 (618)
... +.. .. ......+|||.|+|||++.+..|+..+|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 210 000 00 00112459999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC
Q 007088 496 YSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT 575 (618)
Q Consensus 496 wS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs 575 (618)
||+|||+|||+.|.+||......+. ...+..|...+..... .....+..+||.+|+. ||++|--
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T-~rkI~nwr~~l~fP~~--------------~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQET-YRKIVNWRETLKFPEE--------------VDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhhhccCCCc--------------CcccHHHHHHHHHHhc-CHHHhcC
Confidence 9999999999999999997665432 3345555543322111 1112455666669998 9999975
No 26
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=338.12 Aligned_cols=247 Identities=19% Similarity=0.252 Sum_probs=198.4
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccC----HHHHHHHHHHHhcCCCCCccceeEEEEe----CCeeEEEEee
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHS----EKEFLSEINTLGSVRHRNLVPLLGFCVA----KKERLLVYSY 382 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~ 382 (618)
...||+|++|.||+|.. +|+.||||+++..... .+.+.+|+.++.+++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46899999999999998 6889999999765433 3567899999999999999999999877 3467899999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++|+|.+++.... .+++.....++.|++.||.|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 104 CTRGYLREVLDKEK----DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCCcHHHHHhhCC----CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 99999999997643 4889999999999999999999732 78899999999999999999999999998654321
Q ss_pred CcccccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||...... +...........
T Consensus 178 ~-------~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~-- 240 (283)
T PHA02988 178 F-------KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--------EIYDLIINKNNS-- 240 (283)
T ss_pred c-------cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcCCC--
Confidence 1 2237889999999876 68899999999999999999999999754321 111111111100
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
. ..+......+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 241 ---~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 241 ---L----KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ---C----CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 0 0111234467778889999999999999999999998754
No 27
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-42 Score=351.11 Aligned_cols=267 Identities=26% Similarity=0.394 Sum_probs=211.2
Q ss_pred HHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 007088 298 LSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK 374 (618)
Q Consensus 298 ~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 374 (618)
.++.+...+.+.....||+|+||+||+|.+.+ .||||+++.+. ...+.|++|+..+++-+|.||+-+.|+|..+.
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 34455555667778999999999999999755 59999997543 34567999999999999999999999999887
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
. .+|+.+|+|.+|+.+++..+ ..++..+.+.|+.||++|+.|||.+ +|||||||..||++.++++|||+|||+
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred e-eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccc
Confidence 7 99999999999999999876 4589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT---LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
+..-...... .......|...|||||++.. .+|++++||||||+++|||+||..||......+.....
T Consensus 535 atvk~~w~g~--~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV------- 605 (678)
T KOG0193|consen 535 ATVKTRWSGE--QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV------- 605 (678)
T ss_pred eeeeeeeccc--cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe-------
Confidence 9754322111 11122237789999998764 47899999999999999999999999843322211110
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..+.. ..|. ........+++.+|+..||..++++||.+.+|+..|+++...
T Consensus 606 --GrG~l--~pd~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 606 --GRGYL--MPDL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred --ccccc--Cccc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 00000 0011 111234566788888899999999999999999999888663
No 28
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-41 Score=335.91 Aligned_cols=256 Identities=22% Similarity=0.241 Sum_probs=200.8
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc---------------cCHHHHHHHHHHHhcCCCCCccc
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---------------HSEKEFLSEINTLGSVRHRNLVP 365 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---------------~~~~~~~~E~~~l~~l~h~niv~ 365 (618)
.+..++|++.+.||+|.||.|-+|+ ..+++.||||++.+.. ...+.+++|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 3456789999999999999999999 5679999999996432 12357899999999999999999
Q ss_pred eeEEEEeC--CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC
Q 007088 366 LLGFCVAK--KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG 443 (618)
Q Consensus 366 l~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 443 (618)
++++..+. +..|||+|||..|.+...=... ..+++.++++++.+++.||+|||.+ |||||||||+|+|+++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~----~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~ 245 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK----PELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSS 245 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCCc----ccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcC
Confidence 99999875 4789999999988776543222 2389999999999999999999999 9999999999999999
Q ss_pred CCceEEcccCcccccCCCC-CcccccccCCCCcccccCCCCCCCCC----CCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 007088 444 DFEPKLSDFGLARLMNPVD-THLSTFVNGEFGDLGYVAPEYPRTLV----ATPKGDVYSFGVVLLELITGERPTHLTNAP 518 (618)
Q Consensus 444 ~~~~kl~DfG~a~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwS~Gvil~elltG~~Pf~~~~~~ 518 (618)
+|++||+|||.+....... ...........||+.|+|||...++. .+.+.||||+||+||.|+.|+.||......
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 9999999999998764321 11122233467999999999877632 357899999999999999999999864321
Q ss_pred CccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 519 ESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 519 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+ .+++...+......+.-..+.+|+.++|++||++|.+..+|..
T Consensus 326 ~l~-----------------~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 326 ELF-----------------DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred HHH-----------------HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 111 1222223322223344556777788999999999999988854
No 29
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-41 Score=348.68 Aligned_cols=246 Identities=23% Similarity=0.291 Sum_probs=203.7
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
+-|..++.||.|+.|.|.+|+ ..+|+.+|||++.+. ......+.+|+-+|+-+.||||+++|++++++.+.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 346668889999999999999 578999999999664 233456789999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|.|++++-.++ ++++.++.+++.||+.|+.|+|.. +|+||||||+|+|+|..+++||+|||+|..-.+
T Consensus 92 Eyv~gGELFdylv~kG----~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG----PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EecCCchhHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 9999999999998765 499999999999999999999999 999999999999999999999999999976433
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
. ......||.+.|.|||++.|.+| +.++||||+|||||.|+||+.||++++ +........... .
T Consensus 165 g-----klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN--------ir~LLlKV~~G~--f 229 (786)
T KOG0588|consen 165 G-----KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN--------IRVLLLKVQRGV--F 229 (786)
T ss_pred C-----ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc--------HHHHHHHHHcCc--c
Confidence 2 23345679999999999999988 479999999999999999999998543 222222221110 0
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
+-++....+..+|+.+|+..||++|.|++||++.
T Consensus 230 ---------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 ---------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ---------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1122333455666669999999999999999764
No 30
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4.1e-40 Score=329.56 Aligned_cols=251 Identities=23% Similarity=0.387 Sum_probs=204.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|+..+.||+|+||.||++...++..+|+|.+.......+++.+|++++++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 45788899999999999999988888999999887666677899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++.........
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 84 GCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred CcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 99999987543 2489999999999999999999999 99999999999999999999999999988654322111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.....++..|+|||+..+..++.++||||||+++|||++ |+.||..... .+........... ..+
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--------~~~~~~i~~~~~~---~~~ 223 (256)
T cd05114 158 ---SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--------YEVVEMISRGFRL---YRP 223 (256)
T ss_pred ---cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCCC---CCC
Confidence 112224568999999988889999999999999999999 8999865332 1111111111110 001
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
......+.+++.+||+.+|++||+++|+++.|
T Consensus 224 -------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 224 -------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11234678888899999999999999999876
No 31
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.6e-40 Score=331.88 Aligned_cols=255 Identities=23% Similarity=0.371 Sum_probs=207.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|++.++||+|++|.||+|...++..||+|.+.......+.+.+|+.++++++|+||+++++++...+..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence 56888999999999999999988888999999876655667899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++..........
T Consensus 86 ~~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 86 GSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred CcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 999999865432 4588999999999999999999999 99999999999999999999999999998764322111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.....++..|+|||+..+..++.++|||||||++|||++ |+.||...... ..... .......
T Consensus 161 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~---~~~~~~~------ 223 (261)
T cd05072 161 ---REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-----DVMSA---LQRGYRM------ 223 (261)
T ss_pred ---cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-----HHHHH---HHcCCCC------
Confidence 112235678999999988889999999999999999998 99998653211 11111 1111000
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
.........+.+++.+|+..+|++||+++++.+.|+++
T Consensus 224 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 ----PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 01112234677888899999999999999999999863
No 32
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-40 Score=319.98 Aligned_cols=265 Identities=23% Similarity=0.212 Sum_probs=199.8
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccC---HHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHS---EKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 378 (618)
.++|+..+.|++|.||.||+|+ .++++.||+|+++-+... .-.-.+|+.+|.+++|||||.+..+.... +..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 4568889999999999999999 567899999999765421 12357999999999999999999988654 57899
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|||||+. +|..++.... .++...++..+..|+++|++|||.. .|+|||||++|+|+++.|.+||+|||+|+.+
T Consensus 155 VMe~~Eh-DLksl~d~m~---q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK---QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eHHHHHh-hHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 9999988 9999988765 4689999999999999999999999 9999999999999999999999999999998
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
+......+.. +-|..|+|||++.+ ..|+++.|+||+|||+.||+++++.|.+..+.+....+... ........|
T Consensus 228 gsp~k~~T~l----VVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~l-lGtPte~iw 302 (419)
T KOG0663|consen 228 GSPLKPYTPL----VVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKL-LGTPSEAIW 302 (419)
T ss_pred cCCcccCcce----EEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHH-hCCCccccC
Confidence 7654333332 36899999998775 56999999999999999999999999876543222111110 000000000
Q ss_pred c----chhc---------cccccCCCCHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 L----ETAI---------DKSLLGNGFDG-ELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~----~~~~---------d~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ...+ ...+...+... -...-.+++...+..||.+|.|+.|.++
T Consensus 303 pg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 303 PGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0 0000 00000000000 1134456667999999999999999865
No 33
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.6e-40 Score=328.56 Aligned_cols=256 Identities=22% Similarity=0.359 Sum_probs=208.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|++.+.||+|++|.||+|...+++.||+|.++......+++.+|+.++++++|+||+++++++...+..++||||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 45688899999999999999998788899999998766667789999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 85 ~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 85 YGSLLEYLQGGAG--RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred CCcHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999876542 4589999999999999999999999 9999999999999999999999999999876532111
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
. ..+...+..|+|||+..+..++.++||||||+++|||++ |+.||...... .+. ........
T Consensus 160 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~---~~~~~~~~------ 222 (261)
T cd05068 160 A---REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVL---QQVDQGYR------ 222 (261)
T ss_pred c---cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHH---HHHHcCCC------
Confidence 1 111123457999999998899999999999999999999 99998653211 011 11111100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
..........+.+++.+|++.+|.+||+++++.+.|+++
T Consensus 223 ----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 ----MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ----CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 011122345678888899999999999999999999863
No 34
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4e-40 Score=338.41 Aligned_cols=264 Identities=20% Similarity=0.320 Sum_probs=201.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC-----------------CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccce
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG-----------------GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPL 366 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l 366 (618)
++|.+.++||+|+||.||++..++ +..||+|.+.... ....++.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568889999999999999997532 3479999987642 334678999999999999999999
Q ss_pred eEEEEeCCeeEEEEeecCCCccccccCCCCC---------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCcee
Q 007088 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH---------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIH 431 (618)
Q Consensus 367 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 431 (618)
++++.+.+..++||||+++|+|.+++..... ....+++..+++++.||+.||+|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 9999999999999999999999998754321 113478899999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh--CC
Q 007088 432 RNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT--GE 509 (618)
Q Consensus 432 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt--G~ 509 (618)
|||||+|||++.++.+||+|||+++......... ......++..|+|||++.+..++.++||||||+++|||++ +.
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR--IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeE--ecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999998654332211 1112235788999999988889999999999999999987 55
Q ss_pred CCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 510 RPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 510 ~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
.||...... ................ .........+..+.+++.+||+.||++|||+.||.+.|++
T Consensus 240 ~p~~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDE-----QVIENAGEFFRDQGRQ------VYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHH-----HHHHHHHHHhhhcccc------ccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 677643221 1111111111110000 0000112234567888889999999999999999988863
No 35
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-41 Score=310.87 Aligned_cols=266 Identities=21% Similarity=0.274 Sum_probs=211.2
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeC-----Cee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-----KER 376 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 376 (618)
..++|.+.+.+|+|||+-||+++ ..++..||+|++.-.. ...+...+|++..++++|||+++++++...+ ...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34679999999999999999999 7789999999986544 6677889999999999999999999887543 358
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
|++++|+..|+|.+.+.....+...+++.++++|+.++++||++||+. .|+++||||||.||++.+++.+++.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 999999999999999987776667899999999999999999999997 3459999999999999999999999999987
Q ss_pred ccCCCC-----CcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH
Q 007088 457 LMNPVD-----THLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 457 ~~~~~~-----~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
...-.- ...-........|..|+|||.+. +...++++|||||||++|+|+.|..||+..-.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----------- 246 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----------- 246 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-----------
Confidence 653211 11111112233689999999875 45678999999999999999999999975322
Q ss_pred HHHHhcCCccc-hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 529 ITLLNTNSSLE-TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 529 ~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
..+.+. .+....+.....+.....+.+++..|++.||.+||++.+++..++.+
T Consensus 247 -----~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 247 -----QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111111 11111222122223566788888899999999999999999998875
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.2e-40 Score=335.87 Aligned_cols=250 Identities=24% Similarity=0.279 Sum_probs=197.8
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.|+..+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367789999999999999994 678999999986432 223457889999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred ecCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 9999999888754332 3589999999999999999999999 9999999999999999999999999999875432
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.. .....||..|+|||++.+..++.++|||||||++|||++|+.||........ ........ ....
T Consensus 156 ~~-----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~~~~~~~-~~~~---- 221 (285)
T cd05631 156 ET-----VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK----REEVDRRV-KEDQ---- 221 (285)
T ss_pred Ce-----ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh----HHHHHHHh-hccc----
Confidence 21 1233489999999999999999999999999999999999999986433111 01111110 0000
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
..........+.+++.+||+.||++||+ ++|+++
T Consensus 222 ------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 222 ------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 0011122345667777999999999997 777765
No 37
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=335.82 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=204.2
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
..|+..++||+|.||.||+|. ...++.||+|++.-. ....+++++|+.++.+++++||.++|+.+..+...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 357777899999999999999 467899999999754 34567899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+.||++.+.+..... +++..+.-|+++++.|+.|||.+ +.+|||||+.|||+..+|.+||+|||.+..+....
T Consensus 93 ~~gGsv~~lL~~~~~----~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNI----LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hcCcchhhhhccCCC----CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999986642 57788888999999999999999 99999999999999999999999999998876544
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
....+ .+||+.|||||++....|+.|+||||||++.+||.+|.+|+....+..... -+.+-.
T Consensus 166 ~rr~t----fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf--------------lIpk~~ 227 (467)
T KOG0201|consen 166 KRRKT----FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF--------------LIPKSA 227 (467)
T ss_pred hcccc----ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE--------------eccCCC
Confidence 43333 349999999999998899999999999999999999999997654321100 011111
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.|.+.+ .+ .+.+.+++..||..||+.||++.++++
T Consensus 228 PP~L~~-~~---S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 228 PPRLDG-DF---SPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCcccc-cc---CHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 222322 23 344556666999999999999999875
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.7e-40 Score=348.24 Aligned_cols=260 Identities=23% Similarity=0.345 Sum_probs=202.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 375 (618)
.++|+..+.||+|+||.||+|+. .++..||+|+++... ...+.+.+|+.++..+ +||||+++++++.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34688899999999999999973 345689999997543 3345688999999999 89999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCC----------------------------------------------------------
Q 007088 376 RLLVYSYLENGTLYDKLHPAEH---------------------------------------------------------- 397 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 397 (618)
.++||||+++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999988864321
Q ss_pred -------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 398 -------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 398 -------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
....+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 012578999999999999999999999 9999999999999999999999999999866432211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
. ......++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+ ......
T Consensus 271 ~--~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~----~~~~~---~~~~~~------ 335 (375)
T cd05104 271 V--VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS----KFYKM---IKEGYR------ 335 (375)
T ss_pred c--ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH----HHHHH---HHhCcc------
Confidence 1 1111224668999999999999999999999999999998 888886532211 11111 111100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
...+.....++.+++.+||+.||++||+++||++.|++.
T Consensus 336 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 ----MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 000111234677888899999999999999999999863
No 39
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.5e-40 Score=330.69 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=202.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
++|++.+.||+|+||.||+|... .+..||+|.++... .....+.+|+..+.+++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 56888999999999999999842 46789999997643 2345688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 85 TEYMSNGALDSFLRKHE---GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEeCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 99999999999987543 3589999999999999999999999 99999999999999999999999999876543
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
..... ......++..|+|||.+.+..++.++|||||||++||+++ |+.||...... +..........
T Consensus 159 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~~- 226 (266)
T cd05064 159 SEAIY---TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDGFR- 226 (266)
T ss_pred ccchh---cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCC-
Confidence 21111 1111225678999999998999999999999999999775 99999754321 11111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
.......+..+.+++.+||+.+|.+||+++|+.+.|+++
T Consensus 227 ---------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 ---------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 011122345677888899999999999999999998765
No 40
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.8e-40 Score=328.91 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=206.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.+|+..+.||+|++|.||+|.. +.++.|++|.+.......+++.+|++++++++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 3577788999999999999995 458899999998766666789999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++.........
T Consensus 86 ~~~L~~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 86 YGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 9999999865432 4589999999999999999999999 9999999999999999999999999999876532211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
. .....++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+.........
T Consensus 161 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~------- 222 (263)
T cd05052 161 A---HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEKGY------- 222 (263)
T ss_pred c---cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCC-------
Confidence 1 111224568999999998999999999999999999998 9999864321 11111111110
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
...........+.+++.+|++.||++||++.++++.|+.+
T Consensus 223 ---~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 223 ---RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0111122335677788899999999999999999999875
No 41
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=367.07 Aligned_cols=262 Identities=23% Similarity=0.365 Sum_probs=213.6
Q ss_pred cCCCCcEEeecCCeeEEEEEeCC--C----cEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPG--G----CFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~--~----~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
+-+..+.||+|.||.||.|...+ | ..||||.+++. .....+|.+|..+|++++|||||+++|++.+....++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 34557789999999999999543 3 35999999874 4566789999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCC---CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 379 VYSYLENGTLYDKLHPAEH---EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
++|||++|+|..+|++.+. ....++..+.+.++.|||+|+.||+++ ++|||||.++|+||+....+||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchh
Confidence 9999999999999987632 235688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
+.+...+...... ...-...|||||.+..+.++.|+|||||||++||++| |..||...++.+ .+ .....
T Consensus 850 rDiy~~~yyr~~~--~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~----v~----~~~~~ 919 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHG--EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE----VL----LDVLE 919 (1025)
T ss_pred HhhhhchheeccC--ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH----HH----HHHHh
Confidence 9544333221110 1123468999999999999999999999999999999 999987654321 11 11111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
.+ +-+.+..++..+.+|+..||+.+|++||++..+++++..+.....
T Consensus 920 gg----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 920 GG----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred CC----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 22 122345677788899999999999999999999999999877543
No 42
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=345.07 Aligned_cols=242 Identities=23% Similarity=0.316 Sum_probs=199.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 377 (618)
..++|...++||+|.||.|+++.. .+++.+|||++++.. ...+....|-.++... +||.++.++..|...++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 456799999999999999999995 468899999998854 4456677888887776 5999999999999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+.||++..+.+.. .+++..+.-++..|+.||.|||++ +||+||||.+|||+|.+|++||+|||+++.
T Consensus 446 fvmey~~Ggdm~~~~~~~-----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHTD-----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEecCCCcEEEEEecc-----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 999999999976666543 399999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
-...+... .+.+||+.|+|||++.+..|+.++|.|||||+||||+.|..||...++++....++ .++
T Consensus 518 ~m~~g~~T----sTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~--------~d~- 584 (694)
T KOG0694|consen 518 GMGQGDRT----STFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV--------NDE- 584 (694)
T ss_pred cCCCCCcc----ccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh--------cCC-
Confidence 54333322 23469999999999999999999999999999999999999999766543322111 110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
- .++.....+.+.++.+++..+|++|--+
T Consensus 585 -------~---~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 -------V---RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------C---CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 0 1122334566777779999999999765
No 43
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.1e-40 Score=346.95 Aligned_cols=261 Identities=23% Similarity=0.343 Sum_probs=202.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 375 (618)
.++|++.+.||+|+||.||+|+. .++..||+|+++... ...+.+.+|+++++.+ +|+||+++++++...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 45788999999999999999873 234589999997543 2345688999999999 89999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCC----------------------------------------------------------
Q 007088 376 RLLVYSYLENGTLYDKLHPAEH---------------------------------------------------------- 397 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 397 (618)
.++||||+++|+|.+++.....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999988753210
Q ss_pred --------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccc
Q 007088 398 --------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469 (618)
Q Consensus 398 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 469 (618)
...++++..+++++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++........ ...
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~--~~~ 271 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY--VVK 271 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce--eec
Confidence 113578899999999999999999999 9999999999999999999999999999865432211 111
Q ss_pred cCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 470 ~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
....++..|+|||++.+..++.++|||||||++|||++ |+.||....... . ...... .. ...
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~---~~~~~~-~~---------~~~ 334 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----K---FYKMVK-RG---------YQM 334 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----H---HHHHHH-cc---------cCc
Confidence 11224668999999988899999999999999999997 999997533211 1 111111 00 000
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
........++.+++.+||+.||++||++.++++.|+++.
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 001112346777888999999999999999999999863
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.7e-41 Score=308.81 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=205.5
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|++.+.||+|-||.||.|+ .+++-.||+|++.+++ ....++.+|+++-+.++||||+++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 3568889999999999999999 5678899999997754 4457899999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
+||.+.|++...|..... ..+++.....+..|+|.||.|+|.. +|+||||||+|+|++..+..|++|||.+....
T Consensus 101 lEya~~gel~k~L~~~~~--~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRM--KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEecCCchHHHHHHhccc--ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 999999999999985554 4588899999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
. .... ..+||..|.+||+..+..++..+|+|++|++.||++.|.+||......+.+. .... .
T Consensus 176 ~--~kR~----tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYk--------rI~k----~ 237 (281)
T KOG0580|consen 176 S--NKRK----TLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYK--------RIRK----V 237 (281)
T ss_pred C--CCce----eeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHH--------HHHH----c
Confidence 2 2222 2359999999999999999999999999999999999999998654322211 1110 0
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
+..+ ++.......+++.+|+..+|.+|.+..|+++.
T Consensus 238 ~~~~-------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 238 DLKF-------PSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cccC-------CcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1111 12233455667779999999999999998763
No 45
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.9e-39 Score=330.48 Aligned_cols=266 Identities=20% Similarity=0.209 Sum_probs=199.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|++.+.||+|+||.||+++.. +++.||+|+++... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999964 68899999997542 334568899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++++.+..+.... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 99987776554322 3489999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc-------cCHHHHHHHHhc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK-------GSLVEWITLLNT 534 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~-------~~l~~~~~~~~~ 534 (618)
.... .....|++.|+|||++.+..++.++|||||||++|||++|+.||......+... .....+......
T Consensus 154 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 154 SNAN---YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred cccc---ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 2111 112347899999999988889999999999999999999999997643211000 000011111111
Q ss_pred CCccchhccccccC------CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLG------NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.........+.... .........+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11110000000000 001112346788888999999999999999875
No 46
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.9e-40 Score=341.35 Aligned_cols=240 Identities=20% Similarity=0.242 Sum_probs=192.9
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
+.||+|+||.||++.. .+|+.||+|+++... .....+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999995 578999999997532 23346778999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~-- 151 (323)
T cd05571 81 ELFFHLSRER----VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 151 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc--
Confidence 9999887543 489999999999999999999999 9999999999999999999999999998754322211
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccc
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSL 546 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 546 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .......... ..+
T Consensus 152 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~-------~~~ 214 (323)
T cd05571 152 --MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEE-------IRF 214 (323)
T ss_pred --ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCC-------CCC
Confidence 11234899999999999999999999999999999999999999753211 1111111110 001
Q ss_pred cCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 547 LGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
+......+.+++.+||+.||++|| ++.++++
T Consensus 215 ----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 215 ----PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ----CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 111234566777799999999999 7888864
No 47
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.2e-40 Score=328.55 Aligned_cols=256 Identities=23% Similarity=0.381 Sum_probs=209.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc-CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH-SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
...+|+..++||+|+||.||+|...++..+++|.+..... ...++.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 4567888999999999999999988899999999976543 466789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 84 MEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred cccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 999999999976543 4589999999999999999999999 99999999999999999999999999998764322
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
... ....++..|+|||...+..++.++||||||+++|+|++ |+.||...... +.........
T Consensus 159 ~~~----~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~----- 221 (261)
T cd05148 159 YLS----SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--------EVYDQITAGY----- 221 (261)
T ss_pred ccc----cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHHhCC-----
Confidence 111 12235778999999988889999999999999999998 89998653311 1111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
...........+.+++.+|++.||++|||++++++.|+.+
T Consensus 222 -----~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 222 -----RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -----cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0011122345677888899999999999999999999864
No 48
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.7e-40 Score=337.44 Aligned_cols=243 Identities=19% Similarity=0.236 Sum_probs=197.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999954 68999999986432 23456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRNSG----RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999999987543 489999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.. ....|++.|+|||++.+..++.++|||||||++|||++|+.||...... +......... .
T Consensus 154 ~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~-~-- 215 (291)
T cd05612 154 RT-------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--------GIYEKILAGK-L-- 215 (291)
T ss_pred Cc-------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-c--
Confidence 21 1234899999999999888999999999999999999999999754321 1111111110 0
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
.+ .......+.+++.+||+.||.+||+ ++|+++
T Consensus 216 ----~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 216 ----EF----PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ----CC----CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 00 1111235667777999999999995 777764
No 49
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1e-39 Score=339.87 Aligned_cols=252 Identities=19% Similarity=0.239 Sum_probs=200.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ...+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46889999999999999999964 58999999997532 23456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG----VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 9999999999996543 488999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ......... .
T Consensus 154 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~~---~ 215 (333)
T cd05600 154 -------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE--------TWENLKYWK---E 215 (333)
T ss_pred -------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH--------HHHHHHhcc---c
Confidence 1123348999999999999999999999999999999999999997543211 111110000 0
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+..............++.+++.+||..+|.+||+++|+++.
T Consensus 216 ~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 216 TLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000000000001223456677779999999999999999864
No 50
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-41 Score=340.22 Aligned_cols=243 Identities=26% Similarity=0.406 Sum_probs=202.8
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcccc
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYD 390 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 390 (618)
.+-||+|+.|.||+|++. ++.||||+++.-+ ..+++-|++|+||||+.+.|+|....-+|||||||+.|-|.+
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 578999999999999984 5678999875432 257888999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccccc
Q 007088 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVN 470 (618)
Q Consensus 391 ~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 470 (618)
.|+..+ ++.......|..+||.|+.|||.+ .|||||||.-||||..+..+||+|||.++......+ ..
T Consensus 202 VLka~~----~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST-----kM 269 (904)
T KOG4721|consen 202 VLKAGR----PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST-----KM 269 (904)
T ss_pred HHhccC----ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhh-----hh
Confidence 998765 488888999999999999999999 999999999999999999999999999988765422 22
Q ss_pred CCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCC
Q 007088 471 GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNG 550 (618)
Q Consensus 471 ~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 550 (618)
..+||..|||||++...+.++|+|||||||+||||+||..||.+.+......+ +-...+.-..
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG-----------------VGsNsL~Lpv 332 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG-----------------VGSNSLHLPV 332 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe-----------------ccCCcccccC
Confidence 34599999999999999999999999999999999999999986543222111 0111122233
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 551 FDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 551 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
++.+++.|.-|+++||+..|..||++++++..|+-...+
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 455667788888899999999999999999998865544
No 51
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.7e-39 Score=331.12 Aligned_cols=264 Identities=19% Similarity=0.258 Sum_probs=196.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|++.++||+|+||.||+|.. .++..||+|+++... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 5688899999999999999995 468999999986532 3345678999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++ +|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LDS-DLKQYLDNCG---NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCc-CHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 975 8988886543 3478999999999999999999999 99999999999999999999999999997654322
Q ss_pred CcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH--------HHHHHHHh
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL--------VEWITLLN 533 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l--------~~~~~~~~ 533 (618)
.. .....+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+...... ..|.. ..
T Consensus 158 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 232 (288)
T cd07871 158 KT----YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG-IT 232 (288)
T ss_pred cc----ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc-cc
Confidence 11 122347899999998765 568999999999999999999999997643221110000 00000 00
Q ss_pred cCCccchhccccccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..........+...... ......+..+++.+||+.||.+|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000011111100000 0011235667888999999999999999974
No 52
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.1e-39 Score=323.90 Aligned_cols=253 Identities=26% Similarity=0.374 Sum_probs=204.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|++.++||+|+||.||+|...++..||+|.+.......+.+.+|+.++++++|+|++++++++. .+..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 468889999999999999999888889999999876666778999999999999999999999875 4568999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
++|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.++|+|||.+..........
T Consensus 85 ~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 85 GSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 999999875432 4589999999999999999999999 99999999999999999999999999998764322111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.....++..|+|||+..+..++.++||||||+++|||++ |..||..... .+.........
T Consensus 160 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~-------- 220 (260)
T cd05070 160 ---RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--------REVLEQVERGY-------- 220 (260)
T ss_pred ---ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCC--------
Confidence 112225668999999988889999999999999999999 8889865321 11111111110
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
...........+.+++.+|++.+|++|||+.++.+.|++
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 221 --RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001112234567888889999999999999999998875
No 53
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.7e-39 Score=325.14 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=204.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|...+.||+|+||.||+|...++..+|+|.++......+++.+|+.++++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 45778899999999999999987777899999887666677899999999999999999999999988889999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.++.........
T Consensus 84 ~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 84 GCLLNYLREHG---KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred CcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 99999986543 2589999999999999999999999 99999999999999999999999999988654322111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.....++..|+|||+..+..++.++||||||+++|||++ |+.||...... ............
T Consensus 158 ---~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~------ 220 (256)
T cd05113 158 ---SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEKVSQGLRL------ 220 (256)
T ss_pred ---cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHhcCCCC------
Confidence 112235678999999988889999999999999999998 99998653321 111111111100
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.........+.+++.+||+.||.+||++.++++.|+
T Consensus 221 ----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 ----YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 001112356778888999999999999999998764
No 54
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=337.28 Aligned_cols=243 Identities=21% Similarity=0.265 Sum_probs=196.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|+. .+++.||+|+++... ...+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 4688899999999999999995 468999999986532 23456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG----RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 9999999999987543 488999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
... ...||+.|+|||++.+..++.++|||||||++|||++|+.||...... +........ ..
T Consensus 171 ~~~-------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~-~~-- 232 (329)
T PTZ00263 171 RTF-------TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--------RIYEKILAG-RL-- 232 (329)
T ss_pred Ccc-------eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcC-Cc--
Confidence 221 124899999999999999999999999999999999999999753221 111111111 00
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
.+ .... ...+.+++.+||+.||.+||+ ++++++
T Consensus 233 ----~~-p~~~---~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 233 ----KF-PNWF---DGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ----CC-CCCC---CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 00 0111 234567777999999999997 577653
No 55
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.9e-39 Score=323.01 Aligned_cols=255 Identities=25% Similarity=0.357 Sum_probs=205.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|++.++||+|+||.||+|+..++..||+|.++......+++.+|++++++++|+||+++++++.+ +..++||||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 35688999999999999999998777789999998766667789999999999999999999998754 56799999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.++........
T Consensus 84 ~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 84 KGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158 (262)
T ss_pred CCcHHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence 9999999975432 3579999999999999999999999 9999999999999999999999999999866433221
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
. .....++..|+|||+..+..++.++||||||+++|||++ |..||...... +..........
T Consensus 159 ~---~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~~~------ 221 (262)
T cd05071 159 A---RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYR------ 221 (262)
T ss_pred c---ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcCCC------
Confidence 1 112235678999999988889999999999999999999 88888653221 11111111000
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
.....+....+.+++.+|++.||++||++.++++.|++.
T Consensus 222 ----~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 222 ----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ----CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 011123445678899999999999999999999999874
No 56
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-40 Score=341.98 Aligned_cols=260 Identities=26% Similarity=0.362 Sum_probs=208.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC--CC--cE-EEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP--GG--CF-IMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~--~~--~~-vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
++-...++||+|+||.||+|++. ++ .. ||||..+.+ ....++|.+|.++|++++|||||++||++......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 34444589999999999999953 33 23 899998752 34567899999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++|||+|.||+|.++|..... .++..++..++.+.|.||+|||++ +++||||-++|+|++.++.+||+|||+++
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 999999999999999987763 599999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.-......... .--+..|+|||.+....++.++|||||||++||+++ |..||...... .+..++. ..
T Consensus 311 ~~~~~~~~~~~----~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-----~v~~kI~---~~ 378 (474)
T KOG0194|consen 311 AGSQYVMKKFL----KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-----EVKAKIV---KN 378 (474)
T ss_pred CCcceeecccc----ccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-----HHHHHHH---hc
Confidence 65421111100 013578999999999999999999999999999999 89898764421 1222221 11
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
......+...+..+..++.+|+..||++||+|.++.+.|+.+......
T Consensus 379 ---------~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 379 ---------GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ---------CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 111112223455666777799999999999999999999999876554
No 57
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-40 Score=338.20 Aligned_cols=250 Identities=21% Similarity=0.334 Sum_probs=209.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-eEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE-RLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lV~ 380 (618)
++|...+.+|+|+||.++..+. .+++.|++|.+.-.. ...+...+|+.++++++|||||.+.+.|..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5788899999999999999984 467899999886433 334467899999999999999999999999988 89999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
+|++||++.+.+...++ ..++++.+..++.|++.|+.|||+. +|+|||||+.|||++.+..+||+|||+|+.+..
T Consensus 84 ~Y~eGg~l~~~i~~~k~--~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKG--VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999987763 6799999999999999999999998 999999999999999999999999999999887
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
..... ....||+.|++||++.+.+|..|+||||+||++|||++-+++|...+-. .-+....
T Consensus 159 ~~~~a----~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~--------~Li~ki~------- 219 (426)
T KOG0589|consen 159 EDSLA----STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS--------ELILKIN------- 219 (426)
T ss_pred chhhh----heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH--------HHHHHHh-------
Confidence 55322 2345999999999999999999999999999999999999999864421 1111111
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
+......+..+..++..++..|++.+|..||++.+++..
T Consensus 220 ---~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 220 ---RGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---hccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 111122234455677777779999999999999999987
No 58
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.6e-39 Score=335.36 Aligned_cols=199 Identities=23% Similarity=0.362 Sum_probs=174.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.+.||+|+||.||++... ++..||+|.+.... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367899999999999999999954 68899999987532 334678999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK----RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999987543 4889999999999999999999852 5999999999999999999999999998765432
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
.. ....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 158 ~~------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 158 MA------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred cc------ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 11 1234889999999999989999999999999999999999999643
No 59
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.1e-39 Score=328.09 Aligned_cols=258 Identities=24% Similarity=0.384 Sum_probs=204.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC------CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
++|++.+.||+|+||.||+|...+ ...|++|.++... ....++.+|+.++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998533 2679999986543 23456899999999999999999999999988999
Q ss_pred EEEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC
Q 007088 378 LVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 445 (618)
++|||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999998865321 114588999999999999999999999 999999999999999999
Q ss_pred ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccC
Q 007088 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGS 524 (618)
Q Consensus 446 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~ 524 (618)
.++|+|||+++......... ......+++.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-----~ 234 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYR--VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-----E 234 (283)
T ss_pred cEEECCCcceeecccccccc--ccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 99999999998654322111 1122336788999999988899999999999999999998 99998754321 1
Q ss_pred HHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 525 LVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 525 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
+... .. ... ...........+.+++.+||+.||.+||+++||++.|+++
T Consensus 235 ~~~~---i~-~~~---------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 VIEM---IR-SRQ---------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHH---HH-cCC---------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111 11 111 0111223446778888899999999999999999999763
No 60
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.9e-39 Score=323.42 Aligned_cols=250 Identities=24% Similarity=0.374 Sum_probs=202.5
Q ss_pred cCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
+|++.+.||+|+||.||++...++..+|+|.+........++.+|++++++++||||+++++++...+..++||||++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 47788999999999999999877889999998776666678899999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||.++.........
T Consensus 85 ~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~- 157 (256)
T cd05059 85 CLLNYLRERK---GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS- 157 (256)
T ss_pred CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccccc-
Confidence 9999987543 2589999999999999999999999 99999999999999999999999999997654322111
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....++..|+|||...+..++.++||||||+++||+++ |+.||......+ ... ...... ..
T Consensus 158 --~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~---~~~~~~------~~- 220 (256)
T cd05059 158 --SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-----VVE---SVSAGY------RL- 220 (256)
T ss_pred --cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-----HHH---HHHcCC------cC-
Confidence 111124467999999998899999999999999999999 899986532211 111 111100 00
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
.........+.+++.+|+..+|++|||+.|+++.|
T Consensus 221 ---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 221 ---YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 01112345677888899999999999999999876
No 61
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=350.07 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=210.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCC-cEEEEEEecc-CccCHHHHHHHHHHHhcCC-CCCccceeEE-EEeC------C
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGG-CFIMIKRLED-SQHSEKEFLSEINTLGSVR-HRNLVPLLGF-CVAK------K 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~~------~ 374 (618)
..++++.+.|.+|||+.||.|....+ ..||+|++-. ++...+.+.+|+++|++|+ |+|||.+++. .... -
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 34567789999999999999997665 9999998843 4556677899999999996 9999999993 3221 2
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
+.+|.||||+||.|-+++..+.. ..|++.++++|+.|+++|+++||.. .|+|||||||-+||||+.+++.||||||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 67899999999999999986654 3499999999999999999999986 67799999999999999999999999999
Q ss_pred ccccCCCCCc-c-c---ccccCCCCcccccCCCCC---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH
Q 007088 455 ARLMNPVDTH-L-S---TFVNGEFGDLGYVAPEYP---RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 455 a~~~~~~~~~-~-~---~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~ 526 (618)
|...-..... . . ........|+.|+|||++ .+...++|+|||||||+||-|+....||+.....
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-------- 264 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-------- 264 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--------
Confidence 8653222110 0 0 001123468999999975 5778999999999999999999999999865332
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
.+++........+.+...+.+||..||+.||.+||++-+|+..+.+++.+..
T Consensus 265 -------------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 265 -------------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred -------------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 1222222223345677888899999999999999999999999999877533
No 62
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.5e-39 Score=332.35 Aligned_cols=263 Identities=20% Similarity=0.257 Sum_probs=195.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.+.||+|+||.||+|... +++.||+|+++... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999954 78999999987533 233467889999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDKHP---GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 996 57877776543 3488899999999999999999999 9999999999999999999999999998754322
Q ss_pred CCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC---c
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS---S 537 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~---~ 537 (618)
... .....+++.|+|||++.+ ..++.++||||+||++|||++|+.||....... ..+........... +
T Consensus 157 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~ 229 (303)
T cd07869 157 SHT----YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ---DQLERIFLVLGTPNEDTW 229 (303)
T ss_pred Ccc----CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHHhCCCChhhc
Confidence 211 122347899999998765 457889999999999999999999997543210 01111100000000 0
Q ss_pred -----cchhcccccc---CCCCH------HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 -----LETAIDKSLL---GNGFD------GELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 -----~~~~~d~~l~---~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......... ..... .....+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 230 PGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000000 00000 01235667888999999999999999975
No 63
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=324.76 Aligned_cols=265 Identities=25% Similarity=0.313 Sum_probs=199.2
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----eEEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE-----RLLVY 380 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~lV~ 380 (618)
.|...+++|+|+||.||+|+. .++..||||+.-.+.... .+|+++|++++|||||+++-+|..... ..+||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 466688999999999999994 557999999886544321 379999999999999999988865432 24999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEcccCcccccC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDFGLARLMN 459 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~ 459 (618)
||+|. +|.+.++........++...++-+..||++||+|||+. +|+||||||.|+|+|.+ |.+||+|||.|+.+.
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 99987 99999885433335688888899999999999999998 99999999999999976 899999999999887
Q ss_pred CCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC---
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN--- 535 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~--- 535 (618)
......... .|..|+|||.+.+ ..|+.+.||||.||++.||+-|++.|.+.+.. ..++...+.+-..
T Consensus 178 ~~epniSYi-----cSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~----dQL~eIik~lG~Pt~e 248 (364)
T KOG0658|consen 178 KGEPNISYI-----CSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV----DQLVEIIKVLGTPTRE 248 (364)
T ss_pred cCCCceeEE-----EeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH----HHHHHHHHHhCCCCHH
Confidence 655543332 5789999998776 57999999999999999999999999875432 2233322221110
Q ss_pred ------CccchhccccccCC-----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHhh
Q 007088 536 ------SSLETAIDKSLLGN-----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ--LLRAIA 587 (618)
Q Consensus 536 ------~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 587 (618)
....+...+.+... .......+.++++.++++.+|.+|.++.|++. ..+++.
T Consensus 249 ~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 249 DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 00011111222111 12234567788888999999999999999873 344443
No 64
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.7e-39 Score=322.61 Aligned_cols=254 Identities=27% Similarity=0.400 Sum_probs=206.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|++.++||+|+||.||+|...+++.||+|.+........++.+|+.++++++|+||+++++++. .+..++||||++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 3568889999999999999999888999999999877767788999999999999999999999874 456899999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.........
T Consensus 84 ~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 84 NGSLVDFLKTPEG--IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 9999999865433 4689999999999999999999999 9999999999999999999999999999766532211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
. .....++..|+|||++.+..++.++||||||+++||+++ |+.||...... +..........
T Consensus 159 ~---~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~------ 221 (260)
T cd05067 159 A---REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQNLERGYR------ 221 (260)
T ss_pred c---ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHHcCCC------
Confidence 1 112235678999999988889999999999999999999 99999754321 11111111100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
..........+.+++.+|+..+|++||+++++.+.|+.
T Consensus 222 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 ----MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 00111223467788889999999999999999999875
No 65
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.8e-39 Score=336.36 Aligned_cols=240 Identities=20% Similarity=0.244 Sum_probs=192.0
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
+.||+|+||.||++.. .+|..||+|+++... .....+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999995 578999999997532 23445778999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-- 151 (323)
T cd05595 81 ELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 151 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc--
Confidence 9998886543 489999999999999999999999 9999999999999999999999999998753222111
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccc
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSL 546 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 546 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .......... ..+
T Consensus 152 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~~~~~~-------~~~ 214 (323)
T cd05595 152 --MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEE-------IRF 214 (323)
T ss_pred --cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCC-------CCC
Confidence 12234899999999999999999999999999999999999999754321 1111111100 001
Q ss_pred cCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 547 LGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
. ......+.+++.+||+.||++|| ++.++++
T Consensus 215 p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 215 P----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred C----CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1 11223556777799999999998 8888865
No 66
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=317.40 Aligned_cols=282 Identities=23% Similarity=0.288 Sum_probs=209.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEecc---CccCHHHHHHHHHHHhcCCCCCccceeEEEEe-----CC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLED---SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA-----KK 374 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~ 374 (618)
....|...+.||+|+||.|+.+. ..+|+.||||++.. .....++..+|+++|+.++|+||+.+++.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 34566667899999999999999 56789999999973 33456778999999999999999999999865 24
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..|+|+|+|+. +|.+.++.+. .++...+..++.|+++||+|+|+. +|+||||||+|++++.+..+||+|||+
T Consensus 100 DvYiV~elMet-DL~~iik~~~----~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIKSQQ----DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred eeEEehhHHhh-HHHHHHHcCc----cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 68999999955 9999998764 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCC-CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH------HH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYP-RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL------VE 527 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l------~~ 527 (618)
|+..... .......+.+.|..|+|||+. ....|+.+.||||.|||+.||++|++.|.+.+.......++ .+
T Consensus 172 AR~~~~~--~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 172 ARYLDKF--FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSE 249 (359)
T ss_pred eeecccc--CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCH
Confidence 9987653 223334456689999999975 46789999999999999999999999998765422111000 00
Q ss_pred HHHHHhcCCccchhccc--cccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCc
Q 007088 528 WITLLNTNSSLETAIDK--SLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDE 597 (618)
Q Consensus 528 ~~~~~~~~~~~~~~~d~--~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~ 597 (618)
..-...........+.. ...... ........++|+.+||..||.+|+|++|+++. --.+.++..++++
T Consensus 250 e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h--PYl~~~hdp~dEP 323 (359)
T KOG0660|consen 250 EDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH--PYLAPYHDPEDEP 323 (359)
T ss_pred HHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC--hhhhhhcCCccCC
Confidence 00000000001111100 000000 11223456677779999999999999999762 3445556555555
No 67
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8.7e-39 Score=321.80 Aligned_cols=255 Identities=24% Similarity=0.388 Sum_probs=204.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
++|+..+.||+|+||.||+|... +...|++|.++... ....++.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56888999999999999999863 24689999987543 3345788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREND---GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 99999999999987643 3589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
........ ....++..|+|||...+..++.++||||||+++|||++ |..||...... ..... .......
T Consensus 158 ~~~~~~~~--~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~---~~~~~~~ 227 (266)
T cd05033 158 DSEATYTT--KGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----DVIKA---VEDGYRL 227 (266)
T ss_pred ccccceec--cCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----HHHHH---HHcCCCC
Confidence 22221111 12235678999999998899999999999999999998 99998643211 11111 1111000
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
.........+.+++.+|++.+|++||+++|+++.|+++
T Consensus 228 ----------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ----------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01112345677888899999999999999999999875
No 68
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-39 Score=339.37 Aligned_cols=261 Identities=20% Similarity=0.220 Sum_probs=196.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.++|++.+.||+|+||.||++.. .+++.||+|.... ..+.+|++++++++||||+++++++......++|+|++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 35799999999999999999994 5689999997532 35678999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
. ++|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 166 ~-~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 166 K-TDLYCYLAAKR----NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred C-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 5 68888876543 488999999999999999999999 999999999999999999999999999975432211
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc---cCHHHHHHHHhcC---C-
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK---GSLVEWITLLNTN---S- 536 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~---~~l~~~~~~~~~~---~- 536 (618)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..+.......... .
T Consensus 238 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 238 N---KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred c---ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 1 1123458999999999999999999999999999999999998876433211100 0011110000000 0
Q ss_pred -----ccchhc---------cccccC--CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 -----SLETAI---------DKSLLG--NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 -----~~~~~~---------d~~l~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...... .+.... ........++.+++.+||+.||++|||++|+++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 000000 001123456788899999999999999999975
No 69
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.1e-39 Score=322.94 Aligned_cols=260 Identities=18% Similarity=0.271 Sum_probs=207.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|+. .+++.||+|.++.. ......+.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5788999999999999999994 57899999987542 223456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.........+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988864333334588999999999999999999999 999999999999999999999999999887643
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... .....++..|+|||.+.+..++.++||||||+++|||++|+.||..... ....+........
T Consensus 159 ~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~------~~~~~~~~~~~~~---- 224 (267)
T cd08228 159 KTTA----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLFSLCQKIEQCD---- 224 (267)
T ss_pred hhHH----HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc------cHHHHHHHHhcCC----
Confidence 2211 1123478899999999888899999999999999999999999865321 1112222211111
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
.+. .........+.+++.+||+.+|++||++.||++.++++.
T Consensus 225 --~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 225 --YPP---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --CCC---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 000 111233456778888999999999999999999999863
No 70
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.3e-40 Score=337.28 Aligned_cols=237 Identities=24% Similarity=0.254 Sum_probs=189.6
Q ss_pred EeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 314 IGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 314 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
||+|+||.||++.. .+++.||+|+++.. ......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999995 46889999998643 23345678899999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 468 (618)
.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---- 149 (312)
T cd05585 81 FHHLQREG----RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK---- 149 (312)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc----
Confidence 99987543 489999999999999999999999 9999999999999999999999999999754322211
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 469 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.......... .+
T Consensus 150 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--------~~~~~~~~~~~~-------~~-- 212 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--------NEMYRKILQEPL-------RF-- 212 (312)
T ss_pred cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH--------HHHHHHHHcCCC-------CC--
Confidence 1223489999999999999999999999999999999999999975321 122222111100 00
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCC---HHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHT---MFEVY 580 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl 580 (618)
.......+.+++.+||+.||++||+ +.|++
T Consensus 213 --~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 213 --PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred --CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 1112245667777999999999985 55554
No 71
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.1e-39 Score=336.65 Aligned_cols=245 Identities=22% Similarity=0.398 Sum_probs=190.2
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
+|+..++||+|+||.||+|+. .+++.||+|++.... ...+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 455678999999999999995 468999999986533 23467889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 155 ~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 155 DGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred CCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 999986532 256677889999999999999999 999999999999999999999999999987643221
Q ss_pred cccccccCCCCcccccCCCCCCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRT-----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
. .....||..|+|||++.. ...+.++|||||||++|||++|+.||...... .............
T Consensus 224 ~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~-- 292 (353)
T PLN00034 224 P----CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-----DWASLMCAICMSQ-- 292 (353)
T ss_pred c----ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhccC--
Confidence 1 122348999999998743 23456899999999999999999999743211 1111111110000
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..........++.+++.+||+.||++||++.|+++
T Consensus 293 --------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 293 --------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred --------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00011123346777888999999999999999986
No 72
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=6.4e-39 Score=331.34 Aligned_cols=258 Identities=24% Similarity=0.403 Sum_probs=203.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCc----EEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGC----FIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.+|+..+.||+|+||.||+|++ .++. .||+|.++... ...+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 4688899999999999999984 3333 48999986532 3456788999999999999999999999764 5679
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccc
Confidence 999999999999987654 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ .....++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..........
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~ 229 (316)
T cd05108 160 GADEKEYH--AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SEISSILEKGER 229 (316)
T ss_pred cCCCccee--ccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhCCCC
Confidence 54322211 112224678999999999999999999999999999998 9999865321 111111111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
. .........+.+++.+||+.||.+||++.+++..+..+..+.
T Consensus 230 ~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 230 L----------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred C----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 0 001112345778888999999999999999999999887653
No 73
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.4e-39 Score=336.09 Aligned_cols=241 Identities=20% Similarity=0.257 Sum_probs=193.2
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
+.||+|+||.||++.. .+++.||+|++.... .....+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999994 568999999997532 23456788999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~-- 151 (328)
T cd05593 81 ELFFHLSRER----VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT-- 151 (328)
T ss_pred CHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc--
Confidence 9998886543 489999999999999999999999 9999999999999999999999999998754322111
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccc
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSL 546 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 546 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +......... ..+
T Consensus 152 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--------~~~~~~~~~~-------~~~ 214 (328)
T cd05593 152 --MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMED-------IKF 214 (328)
T ss_pred --cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--------HHHHHhccCC-------ccC
Confidence 12234899999999999889999999999999999999999999753321 1111111100 001
Q ss_pred cCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 007088 547 LGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQL 582 (618)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 582 (618)
+.....++.+++.+||+.||++|| ++.|+++.
T Consensus 215 ----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 215 ----PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 111223566777799999999997 88988753
No 74
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.1e-39 Score=329.34 Aligned_cols=261 Identities=20% Similarity=0.283 Sum_probs=192.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe--CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcC---CCCCccceeEEEEe-----
Q 007088 306 NSFSKNNIIGTGRTGATYIAML--PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSV---RHRNLVPLLGFCVA----- 372 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 372 (618)
++|++.+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+.+++++ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688999999999999999985 347889999986432 2234566777777665 69999999999853
Q ss_pred CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 373 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
....++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 346789999996 589988865433 3589999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
|+++....... .....||+.|+|||.+.+..++.++|||||||++|||++|++||......+. +.......
T Consensus 155 g~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~----~~~i~~~~ 225 (290)
T cd07862 155 GLARIYSFQMA-----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ----LGKILDVI 225 (290)
T ss_pred cceEeccCCcc-----cccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH----HHHHHHHh
Confidence 99986543211 1223488999999999888899999999999999999999999986443211 11111100
Q ss_pred h---cCCcc------chhcccccc---CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 N---TNSSL------ETAIDKSLL---GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~---~~~~~------~~~~d~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ...+. .....+... ..........+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 226 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0 00000 000000000 0000112345667888999999999999999974
No 75
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.7e-39 Score=326.14 Aligned_cols=256 Identities=23% Similarity=0.385 Sum_probs=203.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
++|.+.+.||+|+||.||+|... ++..||+|.++.... ..+.+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 46788899999999999999853 347899999976443 3567999999999999999999999999999999
Q ss_pred EEEeecCCCccccccCCCCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 378 LVYSYLENGTLYDKLHPAEH----------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
+||||+++|+|.+++..... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 99999999999999865421 224588999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||+++......... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 162 kl~d~g~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-------- 231 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYR--VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-------- 231 (280)
T ss_pred EECCcccceecccCccee--cCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------
Confidence 999999997653322110 1112225678999999999999999999999999999998 99998654321
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
+...... ..... .........+.+++.+||+.||++||++.||++.|+
T Consensus 232 ~~~~~~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 EVIECIT-QGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHH-cCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111111 11100 011123356778888999999999999999999886
No 76
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.2e-39 Score=325.53 Aligned_cols=269 Identities=23% Similarity=0.304 Sum_probs=201.9
Q ss_pred cC-CCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--Cee
Q 007088 307 SF-SKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KER 376 (618)
Q Consensus 307 ~y-~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 376 (618)
+| ...+.||+|+||.||++.. .++..||+|.++... ...+.+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 7889999999999988652 457899999997543 2456788999999999999999999988664 357
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||+++
T Consensus 84 ~lv~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 155 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 155 (283)
T ss_pred EEEecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccc
Confidence 8999999999999998643 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
........... .....++..|+|||...+..++.++||||||+++|||++|..|+....... . ....+........
T Consensus 156 ~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~--~-~~~~~~~~~~~~~ 231 (283)
T cd05080 156 AVPEGHEYYRV-REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF--E-EMIGPKQGQMTVV 231 (283)
T ss_pred ccCCcchhhcc-CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh--h-hhhcccccccchh
Confidence 76532211100 111225667999999988889999999999999999999999986533210 0 0000000000000
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
...+.++..............+.+++.+|++.||++|||++++++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 232 RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111111111112223457788888999999999999999999999874
No 77
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8e-39 Score=326.10 Aligned_cols=261 Identities=23% Similarity=0.381 Sum_probs=206.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|.+.+.||+|+||.||++.. .++..+|+|.+.... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 4688889999999999999984 234678999987543 345678999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCC---------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEE
Q 007088 379 VYSYLENGTLYDKLHPAE---------HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
||||+++++|.+++.... .....+++..++.++.|++.||+|||+. +++||||||+||++++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 999999999999886432 1223589999999999999999999999 9999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~ 528 (618)
+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||...... +.
T Consensus 162 ~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--------~~ 231 (288)
T cd05093 162 GDFGMSRDVYSTDYYR--VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------EV 231 (288)
T ss_pred ccCCccccccCCceee--cCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HH
Confidence 9999998654322111 1112225678999999998899999999999999999998 89998654321 11
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
....... .... . .......+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 232 ~~~i~~~-~~~~-----~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 232 IECITQG-RVLQ-----R----PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHcC-CcCC-----C----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1111111 1000 0 111234578888899999999999999999999999764
No 78
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.3e-38 Score=319.52 Aligned_cols=253 Identities=26% Similarity=0.376 Sum_probs=203.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|.+.+.||+|++|.||++...++..+|+|++.......+.+.+|+.++++++|+|++++++++. .+..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 468888999999999999999877778999998776666678899999999999999999999875 4567899999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+..........
T Consensus 85 ~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 85 GSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 999999975432 4589999999999999999999999 99999999999999999999999999997654322111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.....++..|+|||...+..++.++||||||+++|||++ |+.||...... ....+ ......
T Consensus 160 ---~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~---~~~~~~------- 221 (260)
T cd05069 160 ---RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-----EVLEQ---VERGYR------- 221 (260)
T ss_pred ---cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH---HHcCCC-------
Confidence 112235678999999988889999999999999999999 89998753221 11111 111100
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
..........+.+++.+||..||++||+++++++.|++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 ---MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01112234567788889999999999999999999875
No 79
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9e-40 Score=319.99 Aligned_cols=245 Identities=20% Similarity=0.334 Sum_probs=204.3
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.+|++.+.||+|.||.|-+|+ ...|+.||||.++++. .+.-.+++|+++|+.++||||+.++++|+..+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 467788899999999999999 5789999999998754 23345789999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||..+|.|.+|+...+. +++.+..++++||..|+.|+|.+ +++|||||.+|||+|.++++||+|||++..+..
T Consensus 133 EYaS~GeLYDYiSer~~----LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 133 EYASGGELYDYISERGS----LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EecCCccHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999987764 99999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.. +....+|++-|.+||+..+.+| ++.+|-||+||+||.|+.|..||+..+. ...+++.. .+...
T Consensus 206 ~k-----fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--------k~lvrQIs-~GaYr 271 (668)
T KOG0611|consen 206 KK-----FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--------KRLVRQIS-RGAYR 271 (668)
T ss_pred cc-----HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--------HHHHHHhh-ccccc
Confidence 32 2334569999999999999988 4789999999999999999999986432 22222222 11111
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
+ .+.+....-||++||..+|++|-|+.+|...
T Consensus 272 E-----------P~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 272 E-----------PETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred C-----------CCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1 1122334556779999999999999998754
No 80
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6.5e-39 Score=340.12 Aligned_cols=262 Identities=20% Similarity=0.320 Sum_probs=204.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 375 (618)
.++|.+.++||+|+||.||+|+.. .+..||||+++... ...+.+.+|++++++++ ||||+++++++.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 567888999999999999999842 23579999997543 23456899999999996 9999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCC----------------------------------------------------------
Q 007088 376 RLLVYSYLENGTLYDKLHPAEH---------------------------------------------------------- 397 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 397 (618)
.++||||+++|+|.+++.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999988754311
Q ss_pred ----------------------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC
Q 007088 398 ----------------------------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG 443 (618)
Q Consensus 398 ----------------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 443 (618)
....+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 012478889999999999999999999 9999999999999999
Q ss_pred CCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccc
Q 007088 444 DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFK 522 (618)
Q Consensus 444 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~ 522 (618)
++.+||+|||+++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~--- 347 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYV--SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS--- 347 (400)
T ss_pred CCEEEEEeCCcceecccccccc--ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH---
Confidence 9999999999998654322211 1122336788999999988899999999999999999997 999986532110
Q ss_pred cCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 523 GSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 523 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
.+... .. .. ............+.+++.+||+.||++||++.+|.+.|+++.+
T Consensus 348 -~~~~~---~~-~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 -TFYNK---IK-SG---------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred -HHHHH---Hh-cC---------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11111 11 10 0001112234567888889999999999999999999998754
No 81
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.4e-38 Score=324.83 Aligned_cols=261 Identities=22% Similarity=0.395 Sum_probs=206.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|...+.||+|+||.||++... ++..+++|.+.... ...+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45777889999999999999842 35678999987644 334678999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc
Q 007088 379 VYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 446 (618)
||||+++++|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 9999999999999865321 123489999999999999999999999 9999999999999999999
Q ss_pred eEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCH
Q 007088 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSL 525 (618)
Q Consensus 447 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l 525 (618)
++|+|||++......... .......++..|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 162 ~~l~dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------- 232 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT------- 232 (291)
T ss_pred EEECCCCcccccCCCcee--ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------
Confidence 999999999765432211 11112236788999999998999999999999999999999 99998654321
Q ss_pred HHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
+...... ..... ......+..+.+++.+||+.||++||++++|++.|+++.+.
T Consensus 233 -~~~~~~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 233 -EVIECIT-QGRVL---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -HHHHHHh-CCCCC---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111111 11111 01112345677888899999999999999999999999664
No 82
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8.3e-39 Score=333.13 Aligned_cols=261 Identities=23% Similarity=0.346 Sum_probs=202.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeC-Ce
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK-KE 375 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 375 (618)
++|++.+.||+|+||.||+|... +++.||+|+++... ...+.+.+|+.++.++ +|+||+++++++... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 47888999999999999999732 34789999987543 2235677899999999 899999999988654 46
Q ss_pred eEEEEeecCCCccccccCCCCCC---------------------------------------------------------
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHE--------------------------------------------------------- 398 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 398 (618)
.+++|||+++|+|.+++......
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 78999999999999887542210
Q ss_pred CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccc
Q 007088 399 VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478 (618)
Q Consensus 399 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y 478 (618)
..++++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||+++.+........ .....++..|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~--~~~~~~~~~y 241 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR--KGDARLPLKW 241 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhh--ccCCCCCccc
Confidence 12689999999999999999999999 999999999999999999999999999987643221111 1122356789
Q ss_pred cCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHH
Q 007088 479 VAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQ 557 (618)
Q Consensus 479 ~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 557 (618)
+|||++.+..++.++|||||||++|||++ |..||......+ .+.. .. ..... ..........
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~----~~~~---~~-~~~~~---------~~~~~~~~~~ 304 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE----EFCR---RL-KEGTR---------MRAPEYATPE 304 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH----HHHH---HH-hccCC---------CCCCccCCHH
Confidence 99999999999999999999999999998 999987532211 1111 11 11000 0001123356
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 558 FLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 558 l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
+.+++.+||+.+|++||++.|+++.|+++.+
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 7888889999999999999999999998865
No 83
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-38 Score=330.13 Aligned_cols=199 Identities=22% Similarity=0.365 Sum_probs=173.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.++||+|+||.||++... ++..+|+|.+.... .....+.+|++++++++|+||+++++++.++++.++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999964 68899999886532 234568899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999986543 4889999999999999999999742 6999999999999999999999999998765332
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
.. ....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 158 ~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 MA------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred cc------ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 11 1234789999999999888999999999999999999999999753
No 84
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.1e-38 Score=318.76 Aligned_cols=260 Identities=20% Similarity=0.315 Sum_probs=208.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|+..+.||+|++|.||+|... +|+.|++|.++.. ....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999965 7899999988632 223567899999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.........+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999998865433335689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
..... ....++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ...+........ ..
T Consensus 159 ~~~~~----~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~-~~-- 225 (267)
T cd08224 159 KTTAA----HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEKC-DY-- 225 (267)
T ss_pred CCccc----ceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc------cHHHHHhhhhcC-CC--
Confidence 22111 122378899999999888899999999999999999999999864321 122221111110 00
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
+... .......+.+++.+||..+|++||++.+|++.|+++.
T Consensus 226 ---~~~~---~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 226 ---PPLP---ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ---CCCC---hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0000 1133456778888999999999999999999999874
No 85
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.2e-38 Score=331.11 Aligned_cols=248 Identities=17% Similarity=0.232 Sum_probs=192.5
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||++.. .+++.||+|+++... ...+.+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999995 468999999997532 2334578899999888 799999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 g~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~- 152 (329)
T cd05588 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT- 152 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCc-
Confidence 99998886543 489999999999999999999999 9999999999999999999999999998753221111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......++.......... .
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 223 (329)
T cd05588 153 ---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------R 223 (329)
T ss_pred ---cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------C
Confidence 1223489999999999999999999999999999999999999975332221111222222221111110 0
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCC------HHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHT------MFEVY 580 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl 580 (618)
+ +......+.+++.+||+.||.+||+ +++++
T Consensus 224 ~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 224 I----PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred C----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 1 1112235667777999999999998 56664
No 86
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=9.5e-39 Score=332.81 Aligned_cols=243 Identities=20% Similarity=0.242 Sum_probs=195.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC--CcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG--GCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
++|++.+.||+|+||.||+|...+ +..||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468889999999999999998533 3689999986432 3345688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 ~Ey~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK----RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 99999999999987553 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......... .
T Consensus 183 ~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~~~-~- 245 (340)
T PTZ00426 183 TRT-------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQKILEGI-I- 245 (340)
T ss_pred CCc-------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhcCC-C-
Confidence 321 1234899999999999888999999999999999999999999754321 0011111110 0
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
.+ ....+ ..+.+++.+|++.||++|+ +++|+++
T Consensus 246 -----~~-p~~~~---~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 246 -----YF-PKFLD---NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred -----CC-CCCCC---HHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 00 11122 3455677799999999995 7888764
No 87
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=8.3e-39 Score=324.00 Aligned_cols=259 Identities=23% Similarity=0.359 Sum_probs=202.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
.+++|+..+.||+|+||.||+|... .+..||+|.+.... ....++.+|+.++++++||||+++++++...+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999743 35689999986532 234568899999999999999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCC------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEE
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHE------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
.++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998653221 23468889999999999999999999 9999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~ 528 (618)
+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++ |..||..... .+.
T Consensus 161 ~dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--------~~~ 230 (277)
T cd05062 161 GDFGMTRDIYETDYYRK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--------EQV 230 (277)
T ss_pred CCCCCccccCCcceeec--CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHH
Confidence 99999876543222111 111235778999999998889999999999999999999 7888865322 111
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
........ ... ........+.+++.+|++.||++|||+.|+++.|++
T Consensus 231 ~~~~~~~~-~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 231 LRFVMEGG-LLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHcCC-cCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11111111 000 011223467788889999999999999999998863
No 88
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.2e-38 Score=330.97 Aligned_cols=244 Identities=18% Similarity=0.229 Sum_probs=189.4
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||++.. .+++.||+|+++... ...+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999995 468899999997532 2334577888888776 899999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~- 152 (329)
T cd05618 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT- 152 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc-
Confidence 99998886543 489999999999999999999999 9999999999999999999999999998753322111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||..|+|||++.+..++.++|||||||++|||++|+.||...............+.......... .
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~ 223 (329)
T cd05618 153 ---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R 223 (329)
T ss_pred ---cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC------C
Confidence 1123489999999999999999999999999999999999999964332221111222222221111110 0
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
.+......+.+++.+||+.||++||++
T Consensus 224 ----~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 ----IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ----CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 111223456677779999999999984
No 89
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.5e-38 Score=319.10 Aligned_cols=255 Identities=26% Similarity=0.405 Sum_probs=207.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|.+.+.||+|+||.||+|..+++..|++|.+.......+++.+|+.++++++|+||+++++++......++||||++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 46788899999999999999998888899999998776777889999999999999999999999998889999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||++++++.+||+|||.+.........
T Consensus 85 ~~~L~~~i~~~~~--~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (261)
T cd05034 85 KGSLLDFLKSGEG--KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT 159 (261)
T ss_pred CCCHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence 9999999976543 4589999999999999999999999 9999999999999999999999999999876532111
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.......+..|+|||.+.+..++.++||||||+++||+++ |+.||...... ...........
T Consensus 160 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~------ 222 (261)
T cd05034 160 ---AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--------EVLEQVERGYR------ 222 (261)
T ss_pred ---hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC------
Confidence 1111224568999999998889999999999999999998 99998643211 11111111100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
..........+.+++.+|++.+|++||+++++.+.|+.
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 ----MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00011124467788889999999999999999998875
No 90
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=9.4e-39 Score=326.30 Aligned_cols=261 Identities=25% Similarity=0.371 Sum_probs=205.7
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK 374 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 374 (618)
..++|+..+.||+|+||.||++... +...+|+|.+.... ....++.+|++++.++ +|+||+++++++...+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 3456888999999999999999853 34689999987543 2335688999999999 8999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCC------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC
Q 007088 375 ERLLVYSYLENGTLYDKLHPAE------------HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 442 (618)
..+++|||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence 9999999999999999986432 1235689999999999999999999999 999999999999999
Q ss_pred CCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcc
Q 007088 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESF 521 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~ 521 (618)
+++.+||+|||+++........... ....++..|+|||...+..++.++|||||||++||+++ |..||......
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--- 241 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKT--TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--- 241 (293)
T ss_pred CCCeEEeCccccccccccccceecc--CCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH---
Confidence 9999999999999876543221111 11224678999999988899999999999999999997 99998643221
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
+......... ...........+.+++.+|++.||++|||+.|+++.|+++.
T Consensus 242 -----~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 242 -----ELFKLLKEGY----------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -----HHHHHHHcCC----------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111111110 00111223456778888999999999999999999999874
No 91
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.3e-38 Score=317.73 Aligned_cols=247 Identities=21% Similarity=0.291 Sum_probs=195.1
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
+.||+|+||.||+|+. .+++.||+|.+.... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999995 578999999886432 3346789999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 468 (618)
.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......... ..
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--~~ 152 (252)
T cd05084 81 LTFLRTEG---PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA--ST 152 (252)
T ss_pred HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccc--cc
Confidence 99986543 3588999999999999999999999 9999999999999999999999999998765432111 00
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccccc
Q 007088 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLL 547 (618)
Q Consensus 469 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 547 (618)
......+..|+|||.+.+..++.++||||||+++|||++ |..||...... ......... ..
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~~~~~~~~~----------~~ 214 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------QTREAIEQG----------VR 214 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------HHHHHHHcC----------CC
Confidence 011123457999999998889999999999999999998 88888643211 111111110 00
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 548 GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 548 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
..........+.+++.+|++.+|++|||+.|+++.|+
T Consensus 215 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 215 LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1111223456778888999999999999999999886
No 92
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.6e-38 Score=324.14 Aligned_cols=260 Identities=23% Similarity=0.353 Sum_probs=203.2
Q ss_pred cCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
+|+..+.||+|+||.||+|... +...+++|.+.... ...+++.+|+.++++++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999842 23678999886543 234578899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCC--------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 007088 379 VYSYLENGTLYDKLHPAEH--------------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 438 (618)
|+||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 9999999999998754211 124588999999999999999999999 99999999999
Q ss_pred eeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCC
Q 007088 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNA 517 (618)
Q Consensus 439 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~ 517 (618)
|++++++.+||+|||+++.......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVK--RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhc--ccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999986543222111 111235678999999888889999999999999999998 9999864321
Q ss_pred CCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 518 PESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.+........ ............+.+++.+|++.+|++||+++|+++.|+++..+
T Consensus 236 --------~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 236 --------ERLFNLLKTG----------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred --------HHHHHHHhCC----------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 1111111110 00011122334677888899999999999999999999998653
No 93
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.4e-38 Score=320.31 Aligned_cols=259 Identities=20% Similarity=0.305 Sum_probs=206.5
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|++|.||++. ..++..+++|.+.... ....++.+|+.+++.++|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 467888999999999999999 4688999999886432 23457889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++.........+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998864333335689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... .....++..|+|||...+..++.++||||||+++|||++|..||...... ..........
T Consensus 159 ~~~~----~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~------ 222 (267)
T cd08229 159 KTTA----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQ------ 222 (267)
T ss_pred CCcc----cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhhc------
Confidence 2211 11234788999999998888999999999999999999999998643211 1111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
...+... .......+.+++.+|++.||++|||+.+|++.++++
T Consensus 223 ~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 223 CDYPPLP---SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCCCCC---cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 0011111 122344677777899999999999999999999876
No 94
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.3e-39 Score=326.61 Aligned_cols=248 Identities=35% Similarity=0.463 Sum_probs=191.6
Q ss_pred CcEEeecCCeeEEEEEeC-----CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 311 NNIIGTGRTGATYIAMLP-----GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.+.||.|.||.||+|.+. .+..|+||.++... ...+++.+|++.+.+++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 578999999999999965 36789999996533 23578999999999999999999999999888899999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++..... ..+++..+..|+.||++||+|||+. +++|+||+++||+++.++.+||+|||++........
T Consensus 84 ~~g~L~~~L~~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 84 PGGSLDDYLKSKNK--EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp TTEBHHHHHHHTCT--TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccc--ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 99999999987622 4589999999999999999999999 999999999999999999999999999987633222
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
. ...........|+|||.+.+..++.++||||||+++||+++ |+.||.... ..+.......... .
T Consensus 159 ~--~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~--------~~~~~~~~~~~~~-~--- 224 (259)
T PF07714_consen 159 Y--KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD--------NEEIIEKLKQGQR-L--- 224 (259)
T ss_dssp E--EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC--------HHHHHHHHHTTEE-T---
T ss_pred c--ccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccc-c---
Confidence 1 11112236778999999988889999999999999999999 788876432 1222222211111 0
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
.........+.+++.+||+.||++||+++++++.|
T Consensus 225 ------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 ------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11112345677888899999999999999999876
No 95
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.8e-38 Score=325.07 Aligned_cols=261 Identities=24% Similarity=0.347 Sum_probs=203.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC-C--cEEEEEEeccC--ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG-G--CFIMIKRLEDS--QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~-~--~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 379 (618)
++|++.+.||+|+||.||+|...+ + ..+++|.++.. ....+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468889999999999999998643 3 35788888742 23346788999999999 799999999999999999999
Q ss_pred EeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 380 YSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
|||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999865321 113588999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||++......... .....+..|+|||+..+..++.++|||||||++|||++ |..||..... .
T Consensus 159 kl~dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--------~ 225 (297)
T cd05089 159 KIADFGLSRGEEVYVKK-----TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--------A 225 (297)
T ss_pred EECCcCCCccccceecc-----CCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------H
Confidence 99999998643221110 01113457999999988889999999999999999997 9999965332 1
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
+........ ............+.+++.+|++.+|.+||+++++++.|+++.+.+..
T Consensus 226 ~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 226 ELYEKLPQG----------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred HHHHHHhcC----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111111111 00011112234567788899999999999999999999999887643
No 96
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.9e-38 Score=322.47 Aligned_cols=257 Identities=23% Similarity=0.345 Sum_probs=200.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|++.+.||+|+||.||+|.. .++..|++|.+.... .....+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577789999999999999983 356889999997533 233578899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCC-------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC
Q 007088 379 VYSYLENGTLYDKLHPAEH-------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 445 (618)
||||+++|+|.+++..... ....+++.+...++.|++.||+|||+. +++||||||+||+++.++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999998853211 123588999999999999999999999 999999999999999999
Q ss_pred ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccC
Q 007088 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGS 524 (618)
Q Consensus 446 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~ 524 (618)
.+||+|||+++.......... .....++..|+|||++.+..++.++||||||+++|||++ |..||...... .
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~-----~ 234 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRV--QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ-----E 234 (283)
T ss_pred cEEeccccccccccCCcceec--ccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 999999999987543221111 112235678999999988889999999999999999998 99898653211 1
Q ss_pred HHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 525 LVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 525 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
+.+ ........ .........+.+++.+|++.||++||++.++.+.|..
T Consensus 235 ~~~---~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 VIE---MVRKRQLL----------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHH---HHHcCCcC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111 11111100 0111223456777789999999999999999998875
No 97
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.1e-38 Score=327.19 Aligned_cols=240 Identities=23% Similarity=0.253 Sum_probs=191.9
Q ss_pred cEEeecCCeeEEEEEe----CCCcEEEEEEeccCc-----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 312 NIIGTGRTGATYIAML----PGGCFIMIKRLEDSQ-----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+.||+|+||.||+++. .+++.||+|+++... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999984 357899999986532 2334578899999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++|+|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLEREG----IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 99999999986543 478889999999999999999999 99999999999999999999999999987543222
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 155 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--------~~~~~~~~~~~------ 216 (323)
T cd05584 155 TV----THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--------KKTIDKILKGK------ 216 (323)
T ss_pred Cc----ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCC------
Confidence 11 1123489999999999988899999999999999999999999975332 11111111110
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
..+ +......+.+++.+||+.||++|| ++.++++
T Consensus 217 -~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 217 -LNL----PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -CCC----CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 001 111224566777799999999999 7888765
No 98
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=8.9e-39 Score=331.43 Aligned_cols=243 Identities=22% Similarity=0.296 Sum_probs=190.6
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHH---hcCCCCCccceeEEEEeCCeeEEE
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTL---GSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
|++.+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|..++ ++++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56788999999999999995 468999999997532 2234566666554 567899999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|..++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHTD-----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 9999999999887542 489999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
..... .....|++.|+|||++.+..++.++|||||||++|||++|+.||...... +..........
T Consensus 153 ~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~-- 218 (324)
T cd05589 153 GFGDR----TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVNDEV-- 218 (324)
T ss_pred CCCCc----ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC--
Confidence 22211 12234899999999999999999999999999999999999999754321 11111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
. .+......+.+++.+||+.||.+|| ++.++++
T Consensus 219 -----~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 -----R----YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----C----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0 0111234566778899999999999 4666654
No 99
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.4e-39 Score=316.25 Aligned_cols=265 Identities=22% Similarity=0.258 Sum_probs=200.9
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCC-ccceeEEEEeCC------
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRN-LVPLLGFCVAKK------ 374 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 374 (618)
..|...++||+|.||+||+|+ ..+|+.||+|++.-... ......+|+.++++++|+| |+++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 446667789999999999999 56789999999975432 3445689999999999999 999999998877
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++|+||++. +|.+++.........++...++.++.||++||+|||++ +|+||||||.|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 78899999976 99999877653223477789999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH-
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL- 532 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~- 532 (618)
|+...-.... ....++|..|+|||++.+. .|+...||||+|||+.||+++++.|....+.+ .+....+..
T Consensus 167 Ara~~ip~~~----yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~----ql~~If~~lG 238 (323)
T KOG0594|consen 167 ARAFSIPMRT----YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID----QLFRIFRLLG 238 (323)
T ss_pred HHHhcCCccc----ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH----HHHHHHHHcC
Confidence 9966533222 2233478999999998876 79999999999999999999999888755421 111111111
Q ss_pred --hcCCccchh--cc-----cccc-CCCCH----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 533 --NTNSSLETA--ID-----KSLL-GNGFD----GELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 533 --~~~~~~~~~--~d-----~~l~-~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
....|.... .+ +... ..... .......+++.+|++.+|.+|.|++.+++.
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 011111100 00 0000 00011 111367788889999999999999999874
No 100
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.6e-39 Score=339.13 Aligned_cols=254 Identities=23% Similarity=0.264 Sum_probs=201.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|.+.+.||+|+||.||+|... +++.||+|+++... .....+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999954 78999999997532 34456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRKD----VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999987653 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-------------------------cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 461 VDT-------------------------HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 461 ~~~-------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 320 0001122345899999999999999999999999999999999999999764
Q ss_pred CCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHH
Q 007088 516 NAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-MFEVYQL 582 (618)
Q Consensus 516 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 582 (618)
... .......... ..+...........+.+++.+|+. ||.+||+ ++|+++.
T Consensus 234 ~~~--------~~~~~i~~~~-------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQ--------ETYNKIINWK-------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHH--------HHHHHHhccC-------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 321 1111111100 000000001123456677779997 9999999 9999863
No 101
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9.6e-39 Score=324.19 Aligned_cols=246 Identities=22% Similarity=0.250 Sum_probs=192.5
Q ss_pred EeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 314 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
||+|+||+||++.. .+++.||+|.+.... ...+.+..|++++++++|+||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999985 478999999986532 1234577899999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 468 (618)
.+++.........+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~---- 153 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK---- 153 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc----
Confidence 887754333335689999999999999999999999 9999999999999999999999999999765443221
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 469 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........... ...
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~---------~~~-- 218 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRILN---------DSV-- 218 (280)
T ss_pred ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch----hHHHHHHhhcc---------cCC--
Confidence 122348899999999999999999999999999999999999997543211 01111111100 000
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
.........+.+++.+||+.||++|| +++++++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 01122334566777799999999999 6666664
No 102
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-38 Score=347.06 Aligned_cols=252 Identities=19% Similarity=0.184 Sum_probs=199.4
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-C-CcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-G-GCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.|...+.||+|++|.||+|... + +..||+|.+.... .....+.+|+.++++++||||+++++++...+..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3888999999999999999843 3 6788888765433 33345788999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++........++++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999988865433335689999999999999999999999 999999999999999999999999999987653221
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+......... ..
T Consensus 225 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--------~~~~~~~~~~~-~~---- 289 (478)
T PTZ00267 225 L--DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--------REIMQQVLYGK-YD---- 289 (478)
T ss_pred c--ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCC-CC----
Confidence 1 112234589999999999999999999999999999999999999965321 11111111110 00
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.........+.+++.+||+.||++||++.+++.
T Consensus 290 -----~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 -----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 001112345677778999999999999999864
No 103
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.2e-38 Score=320.21 Aligned_cols=257 Identities=24% Similarity=0.365 Sum_probs=199.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCc----EEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGC----FIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|++.+.||+|+||.||+|.. .++. .+++|.+.... ....++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 4577889999999999999995 3443 57888875432 233567888889999999999999998754 45789
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 86 i~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR---DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 999999999999997543 3589999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ .....++..|+|||...+..++.++||||||+++||+++ |+.||...... ...+.. .....
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~---~~~~~ 229 (279)
T cd05111 160 YPDDKKYF--YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-----EVPDLL---EKGER 229 (279)
T ss_pred cCCCcccc--cCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHH---HCCCc
Confidence 43222111 122336778999999988899999999999999999998 99998753221 111111 11111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.. .+ ......+.+++.+|+..||.+|||+.|+++.|..+..+
T Consensus 230 ~~---~~-------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 230 LA---QP-------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CC---CC-------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 00 01 11223567778899999999999999999999987653
No 104
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.9e-38 Score=316.96 Aligned_cols=254 Identities=23% Similarity=0.384 Sum_probs=205.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|...++||+|+||.||++...++..+++|.++......+.+.+|++++++++|+||+++++++.. ...+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 35788899999999999999998788889999988765556789999999999999999999999887 77899999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+|+|.+++..... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||.+.........
T Consensus 84 ~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 84 KGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred CCcHHHHHHhCCc--cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 9999999976433 4588999999999999999999999 9999999999999999999999999999765432211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
. .....++..|+|||++.+..++.++|+|||||++|++++ |+.||...... .+..+.. ....
T Consensus 159 ~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~---~~~~------ 221 (260)
T cd05073 159 A---REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALE---RGYR------ 221 (260)
T ss_pred c---ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHh---CCCC------
Confidence 1 112235678999999988889999999999999999999 99998653221 1111111 1100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
..........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 222 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 ----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01112234567788889999999999999999999875
No 105
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5e-41 Score=309.31 Aligned_cols=250 Identities=20% Similarity=0.272 Sum_probs=198.9
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEecc---CccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLED---SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++.|++-+.||+|.|+.||++. .++|+.+|+|++.. +....+++.+|+.+.+.++||||+++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 3567777889999999999998 56789999998853 3346778999999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---CCceEEcccCcccc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARL 457 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~a~~ 457 (618)
|+|.|++|..-+-.+ ..+++..+-.+.+||+.+|.|.|.+ +|||||+||+|+++.. .--+||+|||+|..
T Consensus 90 e~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 999999997655443 3488889999999999999999999 9999999999999953 33589999999998
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
++.. ....+..|||+|||||+....+|+..+|||+.|||||-|+.|.+||.+.+....+ + ..... .
T Consensus 163 l~~g-----~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rly-----e---~I~~g-~ 228 (355)
T KOG0033|consen 163 VNDG-----EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY-----E---QIKAG-A 228 (355)
T ss_pred eCCc-----cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHH-----H---HHhcc-c
Confidence 8732 2234567999999999999999999999999999999999999999874432211 1 11110 0
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
-...+..++.......+|+.+||..||.+|.|+.|.++
T Consensus 229 ------yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 229 ------YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ------cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 01111122222334445555999999999999988764
No 106
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.7e-39 Score=339.14 Aligned_cols=253 Identities=19% Similarity=0.221 Sum_probs=196.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4788999999999999999995 468999999997532 23355788999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 E~~~~g~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMKKD----TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 9999999999987543 489999999999999999999999 999999999999999999999999999876432
Q ss_pred CCCcc----------------------------------cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHH
Q 007088 461 VDTHL----------------------------------STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506 (618)
Q Consensus 461 ~~~~~----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ell 506 (618)
..... .......+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 11000 00011235899999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 007088 507 TGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT---MFEVYQ 581 (618)
Q Consensus 507 tG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 581 (618)
+|+.||...... +.............. .. ....+ ..+.+++.+|+. +|.+|++ +.|+++
T Consensus 234 ~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~-~~---~~~~s---~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 234 VGYPPFCSDNPQ--------ETYRKIINWKETLQF-PD---EVPLS---PEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred cCCCCCCCCCHH--------HHHHHHHcCCCccCC-CC---CCCCC---HHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999999754321 111111110000000 00 00122 345566668886 9999998 888866
No 107
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-38 Score=331.10 Aligned_cols=250 Identities=22% Similarity=0.267 Sum_probs=194.9
Q ss_pred cCCCCcEEeecCCeeEEEEEe----CCCcEEEEEEeccCc-----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCee
Q 007088 307 SFSKNNIIGTGRTGATYIAML----PGGCFIMIKRLEDSQ-----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 376 (618)
+|++.+.||+|+||.||+++. .+++.||+|++.... ...+.+..|+.++.++ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999984 367899999986432 2345678899999999 599999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD----NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 99999999999999986543 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.......... ....||..|+|||++.+. .++.++|||||||++|||++|+.||....... ............
T Consensus 154 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----~~~~~~~~~~~~ 226 (332)
T cd05614 154 EFLSEEKERT---YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN----TQSEVSRRILKC 226 (332)
T ss_pred cccccCCCcc---ccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC----CHHHHHHHHhcC
Confidence 6533222111 123489999999998765 47889999999999999999999997543211 111111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
++.+. ......+.+++.+||+.||++|| +++++++
T Consensus 227 -------~~~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 -------DPPFP----SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred -------CCCCC----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11111 11233456677799999999999 6777764
No 108
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.2e-39 Score=334.03 Aligned_cols=240 Identities=20% Similarity=0.243 Sum_probs=191.6
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
+.||+|+||.||++.. .+++.||+|+++... .....+..|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999994 578999999997532 23456778999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~- 152 (325)
T cd05594 81 ELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT- 152 (325)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc-
Confidence 9998886543 48999999999999999999997 7 9999999999999999999999999998754322211
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......... ..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--------~~~~~i~~~~-------~~ 214 (325)
T cd05594 153 ---MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEE-------IR 214 (325)
T ss_pred ---cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--------HHHHHHhcCC-------CC
Confidence 11234899999999999989999999999999999999999999753321 1111111100 00
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
+ +......+.+++.+||+.||++|+ ++.++++
T Consensus 215 ~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 215 F----PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred C----CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 1 111223566777799999999996 8999875
No 109
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-38 Score=333.80 Aligned_cols=203 Identities=21% Similarity=0.273 Sum_probs=174.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|+..+.||+|+||.||++.. .+++.||+|++.... .....+.+|+.++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4688899999999999999985 468999999996532 23356788999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMKKD----TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 9999999999987543 489999999999999999999999 999999999999999999999999999976532
Q ss_pred CCCc-------------------------------ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCC
Q 007088 461 VDTH-------------------------------LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509 (618)
Q Consensus 461 ~~~~-------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~ 509 (618)
.... ........+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 1100 000012346899999999999999999999999999999999999
Q ss_pred CCCCCC
Q 007088 510 RPTHLT 515 (618)
Q Consensus 510 ~Pf~~~ 515 (618)
.||...
T Consensus 234 ~Pf~~~ 239 (363)
T cd05628 234 PPFCSE 239 (363)
T ss_pred CCCCCC
Confidence 999754
No 110
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3e-38 Score=320.42 Aligned_cols=262 Identities=23% Similarity=0.371 Sum_probs=207.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCC-----CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEe-CCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPG-----GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVA-KKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 376 (618)
.++|...+.||+|+||.||+|...+ +..|++|++.... ...+.+.+|+.++++++|+||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678889999999999999999655 7889999987542 334668899999999999999999998776 4678
Q ss_pred EEEEeecCCCccccccCCCCCC----CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHE----VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
++++||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998654321 14589999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|+++.+........ .....++..|+|||++.+..++.++||||||+++||+++ |+.||..... .++...
T Consensus 162 g~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~ 231 (280)
T cd05043 162 ALSRDLFPMDYHCL--GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--------FEMAAY 231 (280)
T ss_pred CCcccccCCceEEe--CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--------HHHHHH
Confidence 99986644322111 112235678999999988889999999999999999999 9999975322 111111
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
....... .........+.+++.+|++.||++|||+.|+++.|+++.++
T Consensus 232 ~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 232 LKDGYRL----------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHcCCCC----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 1111110 01111234677888899999999999999999999998764
No 111
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.2e-38 Score=314.90 Aligned_cols=251 Identities=25% Similarity=0.419 Sum_probs=204.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|+..+.||+|+||.||+|... |+.||+|.+.......+++.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 356888999999999999999874 7889999998765556789999999999999999999999998889999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++..... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||.++.......
T Consensus 84 ~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 84 KGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred CCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 9999999876542 3589999999999999999999999 999999999999999999999999999987632211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
....+..|+|||++.+..++.++||||||+++||+++ |+.||...... .+.. .......
T Consensus 158 ------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~---~~~~~~~------ 217 (256)
T cd05039 158 ------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVP---HVEKGYR------ 217 (256)
T ss_pred ------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHH---HHhcCCC------
Confidence 1124568999999988889999999999999999997 99998643211 1111 1111100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
..........+.+++.+||..+|++||++.|+++.|+.+
T Consensus 218 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 218 ----MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ----CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 011112345677888899999999999999999999764
No 112
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-38 Score=338.17 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=193.2
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.|+..+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|++++.+++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578899999999999999984 568999999996532 234568899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIRME----VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 999999999987543 488999999999999999999999 9999999999999999999999999997643210
Q ss_pred CCc-------------------------------------------ccccccCCCCcccccCCCCCCCCCCCCccchHHH
Q 007088 462 DTH-------------------------------------------LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSF 498 (618)
Q Consensus 462 ~~~-------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~ 498 (618)
... .........||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 000 0000112358999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhh--ccCCCCCCCCCH
Q 007088 499 GVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACN--CVLPTPKERHTM 576 (618)
Q Consensus 499 Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~ 576 (618)
||++|||++|+.||......+. ........... . +. .....+. ++.+++.+ |+..+|..||++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~-------~~~i~~~~~~~-~-~~---~~~~~s~---~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTET-------QLKVINWENTL-H-IP---PQVKLSP---EAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHH-------HHHHHcccccc-C-CC---CCCCCCH---HHHHHHHHHccCcccccCCCCH
Confidence 9999999999999976432110 00000000000 0 00 0001223 34445545 556777779999
Q ss_pred HHHHH
Q 007088 577 FEVYQ 581 (618)
Q Consensus 577 ~evl~ 581 (618)
+|+++
T Consensus 300 ~~~l~ 304 (381)
T cd05626 300 DDIKA 304 (381)
T ss_pred HHHhc
Confidence 99976
No 113
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.3e-38 Score=316.99 Aligned_cols=256 Identities=23% Similarity=0.375 Sum_probs=200.1
Q ss_pred CCCCcEEeecCCeeEEEEEeCC----CcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----
Q 007088 308 FSKNNIIGTGRTGATYIAMLPG----GCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE----- 375 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 375 (618)
|.+.+.||+|+||.||+|.... +..||+|+++.... ....+.+|++.+++++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5677899999999999998532 37899999875432 24568899999999999999999999876554
Q ss_pred -eEEEEeecCCCccccccCCCCC--CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 376 -RLLVYSYLENGTLYDKLHPAEH--EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 376 -~~lV~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
.++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 6899999999999988854321 224689999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|+++........... ....++..|+|||.+.+..++.++|||||||++|||++ |..||...... +....
T Consensus 158 g~~~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--------~~~~~ 227 (273)
T cd05035 158 GLSKKIYSGDYYRQG--RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--------EIYDY 227 (273)
T ss_pred cceeecccccccccc--ccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH
Confidence 999876543221111 11224678999999988889999999999999999999 88888653321 11111
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
....... .........+.+++.+|++.||++||++.|+++.|+++
T Consensus 228 ~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 228 LRHGNRL----------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHcCCCC----------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111100 11122345678888899999999999999999999876
No 114
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.9e-38 Score=320.32 Aligned_cols=253 Identities=23% Similarity=0.356 Sum_probs=199.8
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeC------C
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK------K 374 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~ 374 (618)
.+++.|+..+.||+|+||.||+|.. .+++.||+|++.........+.+|+.++.++ +|+||+++++++... .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 4567888899999999999999995 4688999999977666677889999999998 799999999998753 4
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||+
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCC
Confidence 57899999999999999876432 4589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
+.......... ....|+..|+|||++. +..++.++|||||||++|||++|+.||..... .....
T Consensus 158 ~~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-------~~~~~ 226 (272)
T cd06637 158 SAQLDRTVGRR----NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-------MRALF 226 (272)
T ss_pred ceecccccccC----CcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-------HHHHH
Confidence 98654322111 1234788999999875 34578899999999999999999999964321 11111
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. ... . ....... .....+.+++.+||..||.+|||+.|+++
T Consensus 227 ~~-~~~-~-----~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 227 LI-PRN-P-----APRLKSK---KWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HH-hcC-C-----CCCCCCC---CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11 000 0 0111111 12345677888999999999999999875
No 115
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.3e-38 Score=325.24 Aligned_cols=260 Identities=24% Similarity=0.364 Sum_probs=202.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCc--EEEEEEeccC--ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGC--FIMIKRLEDS--QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 379 (618)
++|++.+.||+|+||.||+|... ++. .+++|.++.. ....+.+.+|++++.++ +|+||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46888899999999999999953 443 5688877643 23445788999999999 899999999999999999999
Q ss_pred EeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 380 YSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
|||+++|+|.+++..... ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999865421 123588999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||+++....... . ....++..|+|||++.+..++.++|||||||++|||+| |..||......
T Consensus 164 kl~dfg~~~~~~~~~~---~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------- 230 (303)
T cd05088 164 KIADFGLSRGQEVYVK---K--TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------- 230 (303)
T ss_pred EeCccccCcccchhhh---c--ccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--------
Confidence 9999999864321110 0 11124567999999988889999999999999999998 99998653321
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
+.......... ..........+.+++.+|++.+|++||+++++++.|+++.+.-.
T Consensus 231 ~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 231 ELYEKLPQGYR----------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HHHHHHhcCCc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 11111111000 00111123456788889999999999999999999999876543
No 116
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.9e-39 Score=335.98 Aligned_cols=251 Identities=20% Similarity=0.203 Sum_probs=198.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||++.. .+++.||+|+++... ...+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 4688899999999999999995 578999999997542 23456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRYE---DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 9999999999987653 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCC------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPR------TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ........
T Consensus 155 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~ 223 (330)
T cd05601 155 NKMVN---SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA--------KTYNNIMN 223 (330)
T ss_pred CCcee---eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH--------HHHHHHHc
Confidence 32221 11234899999999876 456789999999999999999999999754321 11111111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....... .........+.+++..|++ +|.+||++.++++
T Consensus 224 ~~~~~~~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 224 FQRFLKF-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCccCC-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 1110000 0001123456667779997 9999999999874
No 117
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.4e-39 Score=338.75 Aligned_cols=253 Identities=19% Similarity=0.212 Sum_probs=197.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
..++|++.++||+|+||.||++.. .+++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 456899999999999999999995 468999999996432 233457889999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 121 v~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 99999999999988643 378888999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCC----CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTL----VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... .........
T Consensus 193 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~ 261 (370)
T cd05596 193 DANGMVR---CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIMD 261 (370)
T ss_pred cCCCccc---CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH--------HHHHHHHHc
Confidence 4322111 1233589999999987643 478999999999999999999999975432 111111111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKE--RHTMFEVYQL 582 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 582 (618)
.... +...........+.+++.+||+.+|.+ ||++.|+++.
T Consensus 262 ~~~~-------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 262 HKNS-------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCc-------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1000 000000112345666777999999988 9999999653
No 118
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.4e-38 Score=330.11 Aligned_cols=265 Identities=23% Similarity=0.305 Sum_probs=193.7
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eeE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-----ERL 377 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 377 (618)
+|++.+.||+|+||.||+|+. .++..||+|+++... .....+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478889999999999999994 578999999986432 23456889999999999999999999886432 479
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||++ ++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKAND----DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 58988886543 489999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc-------cCHHHH
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK-------GSLVEW 528 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~-------~~l~~~ 528 (618)
........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .....+
T Consensus 153 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 153 AFNDTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231 (338)
T ss_pred cccccCcc-ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 43221111 11123458999999998765 678999999999999999999999997543211000 000000
Q ss_pred HHHHhcCCccchhc---cccccC---CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 529 ITLLNTNSSLETAI---DKSLLG---NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 529 ~~~~~~~~~~~~~~---d~~l~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..... .......+ .+.... .........+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 232 ISRVR-NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHhh-hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00000000 000000 000112345678888999999999999999985
No 119
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-38 Score=325.17 Aligned_cols=261 Identities=23% Similarity=0.361 Sum_probs=204.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC--------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP--------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK 374 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 374 (618)
++|.+.+.||+|+||.||++... +...+|+|.++... ....++.+|+++++++ +|+||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 57889999999999999999742 23579999997542 3345688899999999 7999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 442 (618)
..++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 99999999999999999975432 123589999999999999999999999 999999999999999
Q ss_pred CCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcc
Q 007088 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESF 521 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~ 521 (618)
.++.+||+|||.++........... ....++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~----- 247 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKT--TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----- 247 (307)
T ss_pred CCCcEEECCCcccccccccchhhcc--ccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-----
Confidence 9999999999998765432111111 11124568999999988889999999999999999998 888885422
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..+......... ...........+.+++.+|++.+|++||++.|+++.|+++.+.
T Consensus 248 ---~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 ---VEELFKLLKEGH----------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred ---HHHHHHHHHcCC----------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 112221111111 0011122345677788899999999999999999999998765
No 120
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.8e-38 Score=352.44 Aligned_cols=265 Identities=20% Similarity=0.269 Sum_probs=204.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.++||+|+||.||+|.. .+++.||+|++.... ...+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 5789999999999999999995 468999999997532 23457899999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCC-------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 381 SYLENGTLYDKLHPAEH-------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
||++||+|.+++..... ....+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999998853211 123467788899999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCc--------------ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCC
Q 007088 454 LARLMNPVDTH--------------LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519 (618)
Q Consensus 454 ~a~~~~~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~ 519 (618)
+++........ .........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 99876221100 0011112358999999999999999999999999999999999999997532211
Q ss_pred ccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHhhhh
Q 007088 520 SFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-TMFEVYQLLRAIAER 589 (618)
Q Consensus 520 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~ 589 (618)
. . ..... .++.- .....+.+..+.+++.+|++.||++|| +++++.+.|+...+.
T Consensus 239 i-----~-~~~~i---------~~P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 239 I-----S-YRDVI---------LSPIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred h-----h-hhhhc---------cChhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 0 00000 00000 000112334567788899999999995 677788888887653
No 121
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-38 Score=323.07 Aligned_cols=261 Identities=23% Similarity=0.380 Sum_probs=205.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEe--------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML--------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK 373 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 373 (618)
.++|.+.+.||+|+||.||+|.. .++..||+|.+.... ...+++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 45688899999999999999973 124579999987532 3346788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
...++||||+++|+|.+++..... ....+++..+..++.||+.||+|||+. +++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 999999999999999999875422 123588999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPES 520 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~ 520 (618)
+.++.+||+|||.++.......... .....++..|+|||++.+..++.++||||||+++||+++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---- 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---- 244 (304)
T ss_pred cCCCcEEECCCccceeccccccccc--ccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC----
Confidence 9999999999999987644322111 112235678999999988889999999999999999998 778875422
Q ss_pred cccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 521 FKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 521 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
..+........... .........+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 245 ----~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 245 ----VEELFKLLKEGHRM----------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred ----HHHHHHHHHcCCcC----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 22222222211110 0111234567778889999999999999999999998854
No 122
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.2e-38 Score=330.58 Aligned_cols=240 Identities=20% Similarity=0.249 Sum_probs=190.2
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCC-CccceeEEEEeCCeeEEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lV~ 380 (618)
+|++.+.||+|+||.||+|... +++.||+|+++... ...+.+..|.+++..++|+ +|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999954 57899999997532 3345678899999999765 5888999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQVG----KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 9999999999886543 488999999999999999999999 999999999999999999999999999875322
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... +.........
T Consensus 154 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~---- 217 (324)
T cd05587 154 GGKT----TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHN---- 217 (324)
T ss_pred CCCc----eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCC----
Confidence 1111 12234899999999999999999999999999999999999999753321 1111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
..+ +......+.+++.+||..||.+|++.
T Consensus 218 ---~~~----~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ---VSY----PKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ---CCC----CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 000 11123356677779999999999986
No 123
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.4e-38 Score=322.14 Aligned_cols=250 Identities=24% Similarity=0.270 Sum_probs=198.0
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
+|+..++||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++++++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 477889999999999999995 568999999986532 223457789999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++..... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGN--PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 9999999988764332 4589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.. .....|+..|+|||++.+..++.++||||+||++|||++|+.||....... .......... ..
T Consensus 156 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~----~~~~~~~~~~-~~----- 220 (285)
T cd05605 156 ET-----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV----KREEVERRVK-ED----- 220 (285)
T ss_pred Cc-----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh----HHHHHHHHhh-hc-----
Confidence 21 122348899999999988889999999999999999999999997533211 0111111110 00
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
...........+.+++.+|++.||++|| +++++++
T Consensus 221 -----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 221 -----QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred -----ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 0011122344567788899999999999 7778754
No 124
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.4e-38 Score=321.77 Aligned_cols=265 Identities=24% Similarity=0.361 Sum_probs=200.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERL 377 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 377 (618)
++|++.+.||+|+||.||++.. .++..|++|.++... ...+.+.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4688899999999999999974 357899999987543 3346789999999999999999999987543 4678
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR---ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEecCCCCHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 9999999999999986543 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
.......... .....++..|+|||+..+..++.++|||||||++|||++|..|+...... +.........
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---------~~~~~~~~~~ 227 (284)
T cd05081 158 LPQDKEYYKV-REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---------FMRMMGNDKQ 227 (284)
T ss_pred ccCCCcceee-cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---------hhhhcccccc
Confidence 6543221111 11112345699999998888999999999999999999998776432210 0000000000
Q ss_pred -------cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 538 -------LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 538 -------~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
+.+.+...............+.+++.+||+.+|++|||++||++.|+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 228 GQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000000000011122335677888899999999999999999999876
No 125
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-38 Score=347.55 Aligned_cols=258 Identities=21% Similarity=0.244 Sum_probs=203.2
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC---
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK--- 374 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 374 (618)
....++|.+.+.||+|+||.||+|. ..+++.||||++.... .....+.+|+..+..++|+||+++++.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 3345789999999999999999998 4578999999986543 23456788999999999999999988775432
Q ss_pred -----eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEE
Q 007088 375 -----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 375 -----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
..++||||+++|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 35799999999999999876544445789999999999999999999999 9999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..
T Consensus 185 ~DFGls~~~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~--------~~~~~ 254 (496)
T PTZ00283 185 GDFGFSKMYAATVSD--DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN--------MEEVM 254 (496)
T ss_pred EecccCeeccccccc--cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------HHHHH
Confidence 999999875432211 11123458999999999999999999999999999999999999997532 12222
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
....... . + ..+......+.+++.+||+.||.+||++.++++.
T Consensus 255 ~~~~~~~-~----~-----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 255 HKTLAGR-Y----D-----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHhcCC-C----C-----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 2211110 0 0 0111223457777889999999999999999763
No 126
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.5e-38 Score=322.85 Aligned_cols=257 Identities=23% Similarity=0.329 Sum_probs=203.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 376 (618)
++|...+.||+|+||.||++.. ..+..||+|+++... ...+.+.+|+++++++ +|+||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 5688899999999999999973 234589999987543 2345688999999999 799999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+|+||||+||+++.++.++++|||+++
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcccc
Confidence 999999999999999875432 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||......+ ...... . .
T Consensus 190 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~----~~~~~~---~-~ 259 (302)
T cd05055 190 DIMNDSNYV--VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS----KFYKLI---K-E 259 (302)
T ss_pred cccCCCcee--ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH----HHHHHH---H-c
Confidence 654322111 1112235678999999988889999999999999999998 999987543211 111111 1 1
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
.. ...........+.+++.+|+..+|++||++.|+++.|+++
T Consensus 260 ~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 260 GY---------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CC---------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00 0000111234677788899999999999999999999875
No 127
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4e-38 Score=314.71 Aligned_cols=249 Identities=24% Similarity=0.320 Sum_probs=202.0
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||+|++|.||+++. .+++.|++|.+... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 477789999999999999995 46899999998643 23456788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++..... ..+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQRG--RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999999876432 4689999999999999999999999 99999999999999999999999999988765432
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ....++..|+|||+..+..++.++||||||+++|||++|+.||...... ........ ...
T Consensus 156 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~---- 218 (256)
T cd08529 156 NFA----NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--------ALILKIIR-GVF---- 218 (256)
T ss_pred chh----hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHc-CCC----
Confidence 211 1234788999999999888999999999999999999999999754311 11111110 000
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
..........+.+++.+|++.+|++||++.++++.
T Consensus 219 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 219 -----PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -----CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 01111234567888889999999999999999763
No 128
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1e-38 Score=330.25 Aligned_cols=236 Identities=20% Similarity=0.282 Sum_probs=188.2
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|.. .+++.||+|+++... ...+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 468999999987532 3345567888888876 699999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 g~L~~~i~~~~----~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~- 152 (320)
T cd05590 81 GDLMFHIQKSR----RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT- 152 (320)
T ss_pred chHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc-
Confidence 99999886543 489999999999999999999999 9999999999999999999999999998754322111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.......... .
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~~----~--- 214 (320)
T cd05590 153 ---TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEV----V--- 214 (320)
T ss_pred ---ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCC----C---
Confidence 1223489999999999999999999999999999999999999975432 111111111100 0
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMF 577 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 577 (618)
........+.+++.+||+.||++||++.
T Consensus 215 ----~~~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 215 ----YPTWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred ----CCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 0111234566777799999999999983
No 129
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.8e-38 Score=316.75 Aligned_cols=256 Identities=21% Similarity=0.329 Sum_probs=196.1
Q ss_pred CCCCcEEeecCCeeEEEEEeCC-C--cEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC------Ce
Q 007088 308 FSKNNIIGTGRTGATYIAMLPG-G--CFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK------KE 375 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~-~--~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 375 (618)
|.+.+.||+|+||.||+|...+ + ..||+|.++... ...+.+.+|++++++++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3457889999999999999644 3 368999886542 3345688999999999999999999987532 24
Q ss_pred eEEEEeecCCCccccccCCCC--CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 376 RLLVYSYLENGTLYDKLHPAE--HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
.++||||+++|+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999988774321 1224589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHH
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
+++.......... .....+++.|+|||...+..++.++||||||+++|||++ |+.||..... .+.....
T Consensus 158 ~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~ 227 (272)
T cd05075 158 LSKKIYNGDYYRQ--GRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--------SEIYDYL 227 (272)
T ss_pred cccccCcccceec--CCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHH
Confidence 9987654322111 111225678999999998899999999999999999999 8888865321 1111111
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
....... ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 228 ~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 228 RQGNRLK----------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HcCCCCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111100 0112234577888899999999999999999999875
No 130
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5.5e-38 Score=318.34 Aligned_cols=258 Identities=24% Similarity=0.375 Sum_probs=203.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCc----EEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGC----FIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|+..++||+|+||.||+|+. .++. .||+|.++... ...+++.+|+.+++.++|+||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence 5688889999999999999984 4444 58999986532 3356788999999999999999999998754 5689
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
++||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 ~~~~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK---DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEcCCCCCHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeec
Confidence 999999999999987543 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ .....++..|+|||...+..++.++|||||||++|||++ |..||..... ..+..+... ...
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~---~~~ 229 (279)
T cd05109 160 DIDETEYH--ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-----REIPDLLEK---GER 229 (279)
T ss_pred ccccceee--cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHC---CCc
Confidence 53322111 112224678999999988899999999999999999998 8999864321 112222111 100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
. .........+.+++.+||+.||++||++.|+++.|+.+..+.
T Consensus 230 ~----------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 230 L----------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred C----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0 001123346778888999999999999999999999886654
No 131
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.9e-38 Score=316.65 Aligned_cols=257 Identities=25% Similarity=0.412 Sum_probs=203.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CC---cEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GG---CFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.++|+..+.||+|+||.||+|+.. ++ ..+++|.++... ...+++.+|++++++++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356888899999999999999964 23 379999986542 334678899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 84 ITEYMENGALDKYLRDHD---GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 999999999999986543 3589999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
......... ......+..|+|||++.+..++.++|||||||++||+++ |+.||..... .+..........
T Consensus 158 ~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~~~~~ 228 (268)
T cd05063 158 EDDPEGTYT-TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAINDGFR 228 (268)
T ss_pred cccccccee-ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhcCCC
Confidence 432221111 111123457999999988889999999999999999997 9999865321 112222111100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
..........+.+++.+|++.+|++||++.+|++.|+++
T Consensus 229 ----------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 ----------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011112345678888899999999999999999999876
No 132
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.5e-38 Score=312.28 Aligned_cols=246 Identities=21% Similarity=0.309 Sum_probs=196.7
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCccc
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 389 (618)
++||+|+||.||+|...++..||+|.+.... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3689999999999998889999999987543 23446889999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccc
Q 007088 390 DKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469 (618)
Q Consensus 390 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 469 (618)
+++.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++...........
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~--- 151 (250)
T cd05085 81 SFLRKKK---DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS--- 151 (250)
T ss_pred HHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccC---
Confidence 9886543 3478999999999999999999999 999999999999999999999999999875433211111
Q ss_pred cCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 470 ~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
....++..|+|||+..+..++.++||||||+++||+++ |..||...... ........... .
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~----------~ 213 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYR----------M 213 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCC----------C
Confidence 11124567999999988889999999999999999998 99998653221 11111111100 0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.........+.+++.+|+..+|++||++.|+++.|.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 214 SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 111123456788888999999999999999998874
No 133
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1e-38 Score=330.45 Aligned_cols=240 Identities=22% Similarity=0.286 Sum_probs=190.4
Q ss_pred cEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++||+|+||.||+|+.. +++.||+|+++... ...+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999954 57899999997532 2334577888888866 799999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~- 152 (321)
T cd05591 81 GDLMFQIQRSR----KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT- 152 (321)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcc-
Confidence 99998886543 488999999999999999999999 9999999999999999999999999998754322211
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........... ..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--------~~~~~i~~~~~----~~-- 215 (321)
T cd05591 153 ---TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--------DLFESILHDDV----LY-- 215 (321)
T ss_pred ---ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCC----CC--
Confidence 12234899999999999989999999999999999999999999754321 11111111110 00
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCC-------CHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERH-------TMFEVYQ 581 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~ 581 (618)
+......+.+++.+||+.||++|| +++++++
T Consensus 216 -----p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 216 -----PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 011224566777799999999999 7777764
No 134
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=342.91 Aligned_cols=262 Identities=21% Similarity=0.236 Sum_probs=191.3
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeC--------C
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--------K 374 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~ 374 (618)
..++|+..++||+|+||.||+|.. .+++.||||++.... ....+|+.++++++||||+++++++... .
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 346799999999999999999995 568999999886533 2345799999999999999999987542 2
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-ceEEcccC
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-EPKLSDFG 453 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG 453 (618)
..++||||+++ +|.+++.........+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccc
Confidence 35699999985 77776653322235689999999999999999999999 999999999999999664 69999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
+++........ ....||+.|+|||++.+ ..++.++|||||||++|||++|.+||......+. +.......
T Consensus 217 la~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~----~~~i~~~~ 287 (440)
T PTZ00036 217 SAKNLLAGQRS-----VSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ----LVRIIQVL 287 (440)
T ss_pred cchhccCCCCc-----ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHh
Confidence 99866432221 12347899999998765 4689999999999999999999999976443211 11111100
Q ss_pred hcC---------Cccch-----hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTN---------SSLET-----AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~---------~~~~~-----~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... ..... .....+....+.....++.+++.+||+.||.+|||+.|+++
T Consensus 288 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 288 GTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000 00000 00000000001112346778888999999999999999974
No 135
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2e-38 Score=327.49 Aligned_cols=239 Identities=23% Similarity=0.297 Sum_probs=187.0
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|.. .+++.||+|+++... ...+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 457899999997532 2334456677776654 899999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~- 152 (316)
T cd05592 81 GDLMFHIQSSG----RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK- 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCc-
Confidence 99999886543 489999999999999999999999 9999999999999999999999999999764332211
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +......... +.
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~-------~~ 214 (316)
T cd05592 153 ---ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------ELFDSILNDR-------PH 214 (316)
T ss_pred ---cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCC-------CC
Confidence 12234899999999999989999999999999999999999999754321 1111111110 00
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMF-EVY 580 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 580 (618)
+ +......+.+++.+||+.||++||++. +++
T Consensus 215 ~----~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 215 F----PRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred C----CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 111223456677799999999999875 443
No 136
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-38 Score=314.70 Aligned_cols=269 Identities=25% Similarity=0.364 Sum_probs=199.7
Q ss_pred CCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHh--cCCCCCccceeEEEEeCC----eeEEEEee
Q 007088 309 SKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLG--SVRHRNLVPLLGFCVAKK----ERLLVYSY 382 (618)
Q Consensus 309 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~~~----~~~lV~e~ 382 (618)
+..+.||+|+||.||+|.+. ++.||||++... ..+.|.+|-++.+ .++|+||++++++-.... +++||+||
T Consensus 213 ~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f 289 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF 289 (534)
T ss_pred hhHHHhhcCccceeehhhcc-CceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence 33567999999999999984 489999999763 3456777766655 458999999999876655 78999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC------CCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC------NPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
.+.|+|.++|..+. ++|....+|+..+++||+|||+.. +|+|+|||||++|||+.+|+++.|+|||+|.
T Consensus 290 h~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 290 HPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred ccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 99999999998754 899999999999999999999863 5789999999999999999999999999999
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCC------CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH----
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV------ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV---- 526 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~---- 526 (618)
.+........ ..+.+||.+|||||++.+.. .=.+.||||+|.++|||++.-.-++. .+...+.....
T Consensus 365 ~~~p~~~~~d--~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~-~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 365 RLEPGKPQGD--THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP-GPVPEYQLPFEAEVG 441 (534)
T ss_pred EecCCCCCcc--hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC-CCCCcccCchhHHhc
Confidence 8875433222 23366999999999987532 12479999999999999986554432 11111211111
Q ss_pred ------HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 527 ------EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 527 ------~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
+.......+.....+ ...+.. ...+..+.+.+..||+.||+.|-|+.=|.+++.++..-...
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~~-p~~W~~---h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPKI-PDAWRK---HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCCCHHHHHHHHHhhccCCCC-hhhhhc---CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 111111111111111 111111 13566788888899999999999999999999998765543
No 137
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=323.06 Aligned_cols=253 Identities=21% Similarity=0.336 Sum_probs=211.4
Q ss_pred CCCCcEEeecCCeeEEEEEeCC---C--cEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 308 FSKNNIIGTGRTGATYIAMLPG---G--CFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~---~--~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
....++||.|-||.||+|++.+ | -.||||..+.+. ...+.|.+|..+|++++||||++++|+|.+ ...|+||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEE
Confidence 4456789999999999999432 3 468999998643 456789999999999999999999999976 4689999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
|.++-|.|..|++.+. ..++......++.||+.||+|||+. ++|||||..+|||+....-+||+|||+++.+..
T Consensus 470 EL~~~GELr~yLq~nk---~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNK---DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred ecccchhHHHHHHhcc---ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 9999999999998776 3588899999999999999999999 999999999999999999999999999999887
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
......... .-+..|||||-+.-.+++.+||||-|||.+||++. |..||..-.+.+..
T Consensus 544 ~~yYkaS~~---kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI------------------ 602 (974)
T KOG4257|consen 544 DAYYKASRG---KLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI------------------ 602 (974)
T ss_pred cchhhcccc---ccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE------------------
Confidence 654433321 13578999999999999999999999999999987 99999875543221
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
-.+...-+...++.++..+..|+.+||.+||.+||++.|+...|+++.+
T Consensus 603 ~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 1111111223355677788899999999999999999999999998876
No 138
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6.8e-38 Score=313.72 Aligned_cols=246 Identities=21% Similarity=0.316 Sum_probs=193.9
Q ss_pred EEeecCCeeEEEEEe---CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 313 IIGTGRTGATYIAML---PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
.||+|+||.||+|.+ .++..+|+|+++... ...+++.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999974 457899999986543 23467889999999999999999999885 45678999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQKNK----HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 9999986543 489999999999999999999999 999999999999999999999999999987654332211
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
. .....++..|+|||.+....++.++|||||||++|||++ |+.||..... .++......... .
T Consensus 154 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~i~~~~~-~------ 217 (257)
T cd05116 154 A-KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--------NEVTQMIESGER-M------ 217 (257)
T ss_pred e-cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHCCCC-C------
Confidence 1 111224578999999988889999999999999999998 9999975322 112222111110 0
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
..+.....++.+++.+|++.||++||++++|.+.|++
T Consensus 218 ---~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 218 ---ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred ---CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1111233456778889999999999999999999875
No 139
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.7e-38 Score=319.27 Aligned_cols=258 Identities=24% Similarity=0.349 Sum_probs=201.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
..++|.+.+.||+|++|.||+|... .+..|++|.+.... .....+.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3467889999999999999999964 36789999886543 334568999999999999999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCC---CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC---ceEE
Q 007088 376 RLLVYSYLENGTLYDKLHPAEH---EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF---EPKL 449 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 449 (618)
.++||||+++++|.+++..... ....+++..+++++.||+.||+|||+. +++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999865432 123589999999999999999999999 999999999999998654 5999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~ 528 (618)
+|||+++......... .......+..|+|||++.+..++.++|||||||++|||++ |+.||...... +.
T Consensus 161 ~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--------~~ 230 (277)
T cd05036 161 ADFGMARDIYRASYYR--KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--------EV 230 (277)
T ss_pred ccCccccccCCcccee--cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HH
Confidence 9999998763322111 0111123568999999988899999999999999999997 99998753321 11
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.......... .........+.+++.+|++.+|++||++.+|++.|+
T Consensus 231 ~~~~~~~~~~----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 231 MEFVTGGGRL----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHcCCcC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111111110 111122356778888999999999999999999886
No 140
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6e-38 Score=313.66 Aligned_cols=251 Identities=22% Similarity=0.386 Sum_probs=203.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
.+|+..+.||+|+||.||++...++..+++|.+........++.+|++++++++|||++++++++......++||||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 45777899999999999999987788999999987666677899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.........
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~- 156 (256)
T cd05112 84 GCLSDYLRAQR---GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT- 156 (256)
T ss_pred CcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccc-
Confidence 99999986543 3478999999999999999999999 9999999999999999999999999998765432111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
......++..|+|||+..+..++.++||||||+++|||++ |+.||..... ........... ....+
T Consensus 157 --~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~---~~~~~ 223 (256)
T cd05112 157 --SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--------SEVVETINAGF---RLYKP 223 (256)
T ss_pred --ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHhCCC---CCCCC
Confidence 1112224678999999988889999999999999999998 9999865321 11222211110 00111
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
. .....+.+++.+||+.+|++||++.|+++.|
T Consensus 224 ~-------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 R-------LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred C-------CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1 1235677888899999999999999999876
No 141
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.3e-38 Score=337.17 Aligned_cols=254 Identities=19% Similarity=0.180 Sum_probs=194.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.++||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688899999999999999984 578999999986532 23356788999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIKYD----TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9999999999987543 488999999999999999999999 999999999999999999999999999964321
Q ss_pred CCCc------------c-------------------------------cccccCCCCcccccCCCCCCCCCCCCccchHH
Q 007088 461 VDTH------------L-------------------------------STFVNGEFGDLGYVAPEYPRTLVATPKGDVYS 497 (618)
Q Consensus 461 ~~~~------------~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS 497 (618)
.... . ........||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 0 00001235899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCC---C
Q 007088 498 FGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKER---H 574 (618)
Q Consensus 498 ~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R---P 574 (618)
|||++|||++|+.||...... +............. + .........+.+++.+|+. +|.+| +
T Consensus 234 lGvil~elltG~~Pf~~~~~~--------~~~~~i~~~~~~~~-----~--p~~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSH--------ETYRKIINWRETLY-----F--PDDIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHH--------HHHHHHHccCCccC-----C--CCCCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 999999999999999754321 11111110000000 0 0000112345566669997 67665 5
Q ss_pred CHHHHHHH
Q 007088 575 TMFEVYQL 582 (618)
Q Consensus 575 s~~evl~~ 582 (618)
++.|+++.
T Consensus 298 ~~~~~l~h 305 (377)
T cd05629 298 GAHEIKSH 305 (377)
T ss_pred CHHHHhcC
Confidence 99998764
No 142
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.5e-38 Score=315.10 Aligned_cols=252 Identities=20% Similarity=0.253 Sum_probs=198.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
++|++.+.||+|+||.||+|+. .+++.||+|++.... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4688999999999999999995 678999999986543 34456789999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 89 ~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 89 GGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 9999999886543 489999999999999999999999 999999999999999999999999999986643221
Q ss_pred cccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.. ....++..|+|||.+. ...++.++|||||||++|||++|+.||......+... . . ....
T Consensus 162 ~~----~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~----~----~-~~~~--- 225 (267)
T cd06646 162 KR----KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF----L----M-SKSN--- 225 (267)
T ss_pred cc----CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe----e----e-ecCC---
Confidence 11 1223788999999874 4457889999999999999999999986433211100 0 0 0000
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
...+.... .......+.+++.+||+.||++||+++++++.
T Consensus 226 ~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 226 FQPPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CCCCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00001100 11223467778889999999999999999864
No 143
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.4e-38 Score=337.49 Aligned_cols=202 Identities=24% Similarity=0.288 Sum_probs=172.2
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.|+..++||+|+||.||+|.. .+++.||+|++.... .....+.+|++++++++|+||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999994 568899999987532 234568899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIRMG----IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 999999999986543 488899999999999999999999 9999999999999999999999999997533210
Q ss_pred CC-------------------------------------------cccccccCCCCcccccCCCCCCCCCCCCccchHHH
Q 007088 462 DT-------------------------------------------HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSF 498 (618)
Q Consensus 462 ~~-------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~ 498 (618)
.. ..........||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 00 00000112358999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCC
Q 007088 499 GVVLLELITGERPTHLT 515 (618)
Q Consensus 499 Gvil~elltG~~Pf~~~ 515 (618)
||++|||++|+.||...
T Consensus 235 Gvil~elltG~~Pf~~~ 251 (382)
T cd05625 235 GVILYEMLVGQPPFLAQ 251 (382)
T ss_pred hHHHHHHHhCCCCCCCC
Confidence 99999999999999754
No 144
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.3e-38 Score=313.67 Aligned_cols=249 Identities=24% Similarity=0.391 Sum_probs=199.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEE-eCCeeEEEEeecC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCV-AKKERLLVYSYLE 384 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e~~~ 384 (618)
++|.+.+.||+|+||.||++... |..|++|.++... ..+.+.+|+.++++++|+|++++++++. ..+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 46888899999999999999864 7789999986543 4567899999999999999999999765 4457899999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~- 157 (256)
T cd05082 84 KGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD- 157 (256)
T ss_pred CCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccCC-
Confidence 9999999875443 3588999999999999999999999 999999999999999999999999999876543221
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
...++..|+|||+..+..++.++|||||||++|||++ |+.||.... ..+..........
T Consensus 158 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~------ 217 (256)
T cd05082 158 ------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPRVEKGYK------ 217 (256)
T ss_pred ------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHhcCCC------
Confidence 1124568999999988889999999999999999998 999986432 2222222211100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
..........+.+++.+|++.+|++|||+.++++.|+++
T Consensus 218 ----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 ----MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 011122345677788899999999999999999998864
No 145
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=6.8e-38 Score=313.63 Aligned_cols=249 Identities=22% Similarity=0.364 Sum_probs=197.1
Q ss_pred cEEeecCCeeEEEEEeC--C--CcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAMLP--G--GCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++||+|+||.||+|+.. + +..||+|.+..... ..+++.+|+.++++++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999842 2 37899999976543 4567899999999999999999999876 4567999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 99999997654 489999999999999999999999 99999999999999999999999999998765433221
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.. .....++..|+|||...+..++.++||||||+++|||++ |+.||..... ..+..+. ......
T Consensus 153 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----~~~~~~~---~~~~~~------ 217 (257)
T cd05060 153 RA-TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----AEVIAML---ESGERL------ 217 (257)
T ss_pred cc-ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHH---HcCCcC------
Confidence 11 111223567999999998899999999999999999998 9999865322 1111221 111110
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
.........+.+++.+|+..+|++||++.++++.|+++.
T Consensus 218 ----~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 ----PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 011123356778888999999999999999999999864
No 146
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.3e-38 Score=314.92 Aligned_cols=256 Identities=24% Similarity=0.388 Sum_probs=202.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
++|++.+.||+|+||.||+|... .+..+|+|.++... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888999999999999999853 23479999986533 2345789999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++....
T Consensus 84 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKHD---GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 99999999999997543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
........ .....++..|+|||++.+..++.++||||||+++||+++ |..||...... .... ........
T Consensus 158 ~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-----~~~~---~~~~~~~~ 228 (267)
T cd05066 158 DDPEAAYT-TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-----DVIK---AIEEGYRL 228 (267)
T ss_pred cccceeee-cCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-----HHHH---HHhCCCcC
Confidence 43221111 111223568999999998889999999999999999886 99998754321 1111 11111000
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
......+..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 229 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 ----------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ----------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 01112334667888899999999999999999999875
No 147
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.4e-38 Score=335.37 Aligned_cols=256 Identities=19% Similarity=0.215 Sum_probs=196.8
Q ss_pred HHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 301 LMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 301 l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
+....++|+..+.||+|+||.||++.. .+++.||+|++.+.. ...+.+.+|+.+++.++||||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 344567899999999999999999995 468899999986422 234557899999999999999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.++||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccc
Confidence 99999999999999998643 378899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCC----CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL----VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
......... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......
T Consensus 190 ~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~--------~~~~~~ 258 (370)
T cd05621 190 MKMDETGMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL--------VGTYSK 258 (370)
T ss_pred eecccCCce---ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 876432211 11234589999999988654 378899999999999999999999975432 111111
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKE--RHTMFEVYQL 582 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 582 (618)
....... +...........+.+++.+|+..++.+ ||++.|+++.
T Consensus 259 i~~~~~~-------~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 259 IMDHKNS-------LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHhCCcc-------cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1111000 000000112334556666888755543 8899998774
No 148
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.2e-38 Score=327.16 Aligned_cols=239 Identities=23% Similarity=0.301 Sum_probs=187.9
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|.. .+|+.||+|.++... ...+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999995 468899999997532 2344567788887754 899999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 g~L~~~i~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 152 (316)
T cd05620 81 GDLMFHIQDKG----RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR- 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCc-
Confidence 99999886543 488999999999999999999999 9999999999999999999999999998753222111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... +......... +.
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~~-------~~ 214 (316)
T cd05620 153 ---ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVDT-------PH 214 (316)
T ss_pred ---eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-------CC
Confidence 12234899999999999999999999999999999999999999754321 1111111110 00
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMF-EVY 580 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 580 (618)
+. .. ...++.+++.+||+.||++||++. +++
T Consensus 215 ~~-~~---~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 215 YP-RW---ITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CC-CC---CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 10 11 223456677799999999999985 554
No 149
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.9e-38 Score=326.23 Aligned_cols=239 Identities=24% Similarity=0.329 Sum_probs=188.1
Q ss_pred cEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|... +++.||+|+++... ...+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999954 57899999997532 2344566788888764 899999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 152 (316)
T cd05619 81 GDLMFHIQSCH----KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK- 152 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc-
Confidence 99999986543 488999999999999999999999 9999999999999999999999999998753222111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||..|+|||++.+..++.++|||||||++|||++|+.||...... +......... +.
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~-------~~ 214 (316)
T cd05619 153 ---TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--------ELFQSIRMDN-------PC 214 (316)
T ss_pred ---eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC-------CC
Confidence 11234899999999999989999999999999999999999999753321 1111111110 00
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMF-EVY 580 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 580 (618)
. +......+.+++.+||+.||++||++. ++.
T Consensus 215 ~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 Y----PRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred C----CccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 0 011223456777799999999999997 553
No 150
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.3e-38 Score=320.17 Aligned_cols=264 Identities=22% Similarity=0.355 Sum_probs=200.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC---------------CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG---------------GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLG 368 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~ 368 (618)
++|++.+.||+|+||.||++...+ ...||+|.++... .....+.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 478889999999999999987532 2358999987542 33456899999999999999999999
Q ss_pred EEEeCCeeEEEEeecCCCccccccCCCCC--------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCee
Q 007088 369 FCVAKKERLLVYSYLENGTLYDKLHPAEH--------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCIL 440 (618)
Q Consensus 369 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 440 (618)
++...+..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 99999999999999999999998854321 113478999999999999999999999 9999999999999
Q ss_pred eCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCCCC
Q 007088 441 LDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT--GERPTHLTNAP 518 (618)
Q Consensus 441 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt--G~~Pf~~~~~~ 518 (618)
+++++.+||+|||++......... .......++..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYY--RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EcCCCcEEecccccccccccCcce--eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 999999999999999765432211 11112235678999999988889999999999999999998 56677643221
Q ss_pred CccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 519 ESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 519 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
+ .+............. .........+..+.+++.+|++.||++||++++|++.|++
T Consensus 240 ~----~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 Q----VIENTGEFFRNQGRQ-------IYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred H----HHHHHHHhhhhcccc-------ccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1 111111111110000 0000111123578888889999999999999999998863
No 151
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7.8e-38 Score=315.72 Aligned_cols=250 Identities=24% Similarity=0.369 Sum_probs=194.7
Q ss_pred cEEeecCCeeEEEEEeCC-Cc--EEEEEEeccC--ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAMLPG-GC--FIMIKRLEDS--QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|...+ +. .+++|.++.. ....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999643 43 5788988753 23446788999999999 799999999999999999999999999
Q ss_pred CccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 386 GTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 386 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999865431 123588999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHH
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
++........ . .....+..|+|||++.+..++.++||||||+++|||++ |..||..... .+.....
T Consensus 158 l~~~~~~~~~---~--~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--------~~~~~~~ 224 (270)
T cd05047 158 LSRGQEVYVK---K--TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEKL 224 (270)
T ss_pred Cccccchhhh---c--cCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--------HHHHHHH
Confidence 9863221110 0 01113567999999988889999999999999999997 9999865321 1111111
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
..... ..........+.+++.+|++.||.+|||+.|+++.|+++.
T Consensus 225 ~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 PQGYR----------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred hCCCC----------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11100 0111122346778888999999999999999999999875
No 152
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.9e-38 Score=320.10 Aligned_cols=256 Identities=21% Similarity=0.293 Sum_probs=200.2
Q ss_pred cCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
+|.+.+.||+|+||.||+|... ++..||+|+++.... ..+.+.+|+.++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4666788999999999999853 257899999975432 23568899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCC------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc
Q 007088 379 VYSYLENGTLYDKLHPAE------------HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 446 (618)
++||+++++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999875321 1123588999999999999999999999 9999999999999999999
Q ss_pred eEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCH
Q 007088 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSL 525 (618)
Q Consensus 447 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l 525 (618)
+||+|||+++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 163 ~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------- 232 (283)
T cd05091 163 VKISDLGLFREVYAADYY--KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------- 232 (283)
T ss_pred eEecccccccccccchhe--eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 999999998865432211 11122235778999999988889999999999999999998 8888864321
Q ss_pred HHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
.++......... . .........+.+++.+|++.+|++||+++||++.|+.
T Consensus 233 ~~~~~~i~~~~~-~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNRQV-L---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcCCc-C---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 122222211110 0 0112234557788889999999999999999999864
No 153
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.6e-38 Score=318.51 Aligned_cols=261 Identities=22% Similarity=0.331 Sum_probs=203.2
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
..++|++.+.||+|+||.||+|... .+..||+|.+..... ....+.+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999743 245899998865432 23457889999999999999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCC------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEE
Q 007088 376 RLLVYSYLENGTLYDKLHPAEH------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
.++||||+++|+|.+++..... .....++..+..++.|++.||.|||++ +|+||||||+||+++.++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999864321 123457788899999999999999999 9999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~ 528 (618)
+|||+++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+.
T Consensus 161 ~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--------~~~ 230 (288)
T cd05061 161 GDFGMTRDIYETDYYRK--GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQV 230 (288)
T ss_pred CcCCccccccccccccc--cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHH
Confidence 99999986543221111 111224678999999988889999999999999999998 7888864321 111
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
......... . .........+.+++.+|++.||++|||+.++++.|++..
T Consensus 231 ~~~~~~~~~-~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 LKFVMDGGY-L---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHcCCC-C---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 111111110 0 001122356778888999999999999999999988764
No 154
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-37 Score=319.24 Aligned_cols=248 Identities=27% Similarity=0.382 Sum_probs=200.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.+|+..+.||+|++|.||+|.. .++..|++|.+.... ...+.+.+|+.+++.++|+||+++++.+....+.++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 5788899999999999999994 578999999886543 33566889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 100 ~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 100 AGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred CCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 999999998542 378999999999999999999999 999999999999999999999999999876543221
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.. ....+++.|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+.. ......
T Consensus 172 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-------~~~~~-~~~~~~------ 233 (296)
T cd06654 172 KR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYL-IATNGT------ 233 (296)
T ss_pred cc----CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-------HhHHH-HhcCCC------
Confidence 11 1224788999999998888999999999999999999999999754321 11111 110000
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+ .........+.+++.+||..||++||++.|+++
T Consensus 234 ~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 234 PEL--QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCC--CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 000 111223355777888999999999999999986
No 155
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.5e-38 Score=332.30 Aligned_cols=262 Identities=21% Similarity=0.326 Sum_probs=203.1
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKK 374 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 374 (618)
..++|.+.++||+|+||.||+|+.. .+..||+|+++... ...+.+.+|++++.++. ||||+++++++...+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3456888899999999999999853 34689999997643 22346889999999997 999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCCC---------------------------------------------------------
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEH--------------------------------------------------------- 397 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 397 (618)
..++||||+++|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999998864321
Q ss_pred -------------------------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCee
Q 007088 398 -------------------------------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCIL 440 (618)
Q Consensus 398 -------------------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 440 (618)
....+++..+..++.|++.||+|||+. +++||||||+||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEE
Confidence 112477888999999999999999998 9999999999999
Q ss_pred eCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCC
Q 007088 441 LDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPE 519 (618)
Q Consensus 441 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~ 519 (618)
+++++.+||+|||+++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYI--SKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EeCCCEEEEEecCcceecccccccc--cCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 9999999999999998653322111 1112236788999999988889999999999999999998 888986432211
Q ss_pred ccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 520 SFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 520 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
.......... ....+......+.+++.+||..+|.+||+++||++.|+++.
T Consensus 350 -------~~~~~~~~~~----------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 -------QFYNAIKRGY----------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred -------HHHHHHHcCC----------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0111111110 00111112346777777999999999999999999999864
No 156
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.8e-38 Score=336.15 Aligned_cols=254 Identities=20% Similarity=0.212 Sum_probs=194.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||++.. .+++.||+|++.... .....+.+|++++++++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688999999999999999994 568999999986532 23456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIRLG----IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 9999999999997643 488899999999999999999999 999999999999999999999999999753311
Q ss_pred CCC---------------------------------------cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHH
Q 007088 461 VDT---------------------------------------HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVV 501 (618)
Q Consensus 461 ~~~---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvi 501 (618)
... ..........||+.|+|||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 000 00000112358999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC---CHHH
Q 007088 502 LLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH---TMFE 578 (618)
Q Consensus 502 l~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~e 578 (618)
+|||++|+.||...... +.......... .+...........+.+++.+|+ .+|.+|+ ++.|
T Consensus 234 lyell~G~~Pf~~~~~~--------~~~~~i~~~~~-------~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 234 LYEMLVGQPPFLADTPA--------ETQLKVINWET-------TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred eeehhhCCCCCCCCCHH--------HHHHHHhccCc-------cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 99999999999764321 11111110000 0000000112234455555765 5999999 8888
Q ss_pred HHHH
Q 007088 579 VYQL 582 (618)
Q Consensus 579 vl~~ 582 (618)
+++.
T Consensus 298 ll~h 301 (376)
T cd05598 298 IKAH 301 (376)
T ss_pred HhCC
Confidence 8754
No 157
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.1e-37 Score=323.58 Aligned_cols=243 Identities=19% Similarity=0.227 Sum_probs=188.9
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||++.. .+++.||+|+++... ...+.+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999995 567899999997532 2334578899999888 699999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~- 152 (327)
T cd05617 81 GDLMFHMQRQR----KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT- 152 (327)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc-
Confidence 99998886543 489999999999999999999999 9999999999999999999999999998753221111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...++.......... .
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~------~ 221 (327)
T cd05617 153 ---TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM--NTEDYLFQVILEKPI------R 221 (327)
T ss_pred ---eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc--ccHHHHHHHHHhCCC------C
Confidence 12234899999999999999999999999999999999999999753322111 111111111111100 0
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMF 577 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 577 (618)
+ +......+.+++.+||+.||++|+++.
T Consensus 222 ~----p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 222 I----PRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred C----CCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 0 111223456777799999999999853
No 158
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.6e-38 Score=318.33 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=202.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
++|.+.+.||+|+||.||+|... .+..|++|.+.... .....+.+|+.++++++|+||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 57888999999999999999853 24789999987543 23456889999999999999999999999999999
Q ss_pred EEEeecCCCccccccCCCCCC------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcc
Q 007088 378 LVYSYLENGTLYDKLHPAEHE------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSD 451 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 451 (618)
+||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECC
Confidence 999999999999998654321 23478999999999999999999999 999999999999999999999999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHH
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWIT 530 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~ 530 (618)
||+++......... ......++..|+|||.+.+..++.++|||||||++||+++ |..||...... ....+
T Consensus 163 fg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-----~~~~~-- 233 (277)
T cd05032 163 FGMTRDIYETDYYR--KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-----EVLKF-- 233 (277)
T ss_pred cccchhhccCcccc--cCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-----HHHHH--
Confidence 99998654332111 1112236788999999988889999999999999999998 99998643221 11111
Q ss_pred HHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 531 LLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 531 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.. ..... ..+......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 234 -~~-~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 234 -VI-DGGHL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -Hh-cCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11 11100 011122456778888999999999999999999886
No 159
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-37 Score=324.38 Aligned_cols=264 Identities=23% Similarity=0.361 Sum_probs=206.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC--------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP--------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK 374 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 374 (618)
.+|.+.+.||+|+||.||++... .+..||+|.++... ...+++.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999732 12478999887532 2346788999999999 7999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 442 (618)
..+++|||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 99999999999999999865321 124588999999999999999999999 999999999999999
Q ss_pred CCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcc
Q 007088 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESF 521 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~ 521 (618)
.++.+||+|||+++.......... .....++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~----- 241 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP----- 241 (334)
T ss_pred CCCcEEECCcccceeccccccccc--ccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----
Confidence 999999999999986543221111 111224567999999999899999999999999999998 888886432
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
..+.......... ..........+.+++.+|++.+|++||++.|+++.|+++......
T Consensus 242 ---~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~~ 299 (334)
T cd05100 242 ---VEELFKLLKEGHR----------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTST 299 (334)
T ss_pred ---HHHHHHHHHcCCC----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcCC
Confidence 1222222211110 011122345677888899999999999999999999999754443
No 160
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4e-38 Score=319.11 Aligned_cols=246 Identities=20% Similarity=0.222 Sum_probs=191.8
Q ss_pred EeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 314 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
||+|+||.||++.. .+|+.||+|.+.... ...+.+..|++++++++||||+++++++.++.+.++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999995 568999999986432 2234566799999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 468 (618)
.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~---- 151 (277)
T cd05607 81 KYHIYNVGE--RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI---- 151 (277)
T ss_pred HHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCcee----
Confidence 988865432 4588999999999999999999999 9999999999999999999999999998766432211
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 469 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ............ .. . ...
T Consensus 152 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~-~~----~--~~~ 219 (277)
T cd05607 152 -TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV----AKEELKRRTLED-EV----K--FEH 219 (277)
T ss_pred -eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh----hHHHHHHHhhcc-cc----c--ccc
Confidence 12347899999999988889999999999999999999999997532210 111111111100 00 0 001
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
. ....++.+++.+||+.||++||+++|+++.+
T Consensus 220 ~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 220 Q---NFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred c---cCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 1 1234566777799999999999998876433
No 161
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=324.99 Aligned_cols=264 Identities=23% Similarity=0.357 Sum_probs=213.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
+...+.++||+|.||.|.++...++..||||.++... ...++|.+|+++|.+++||||++++|+|..++..++|+||+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 3456788999999999999999889999999998754 44578999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++...... ...-....+|+.||+.|++||.+. ++|||||.++|+|+|.++++||+|||+++.+-..+.
T Consensus 618 EnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred hcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCc
Confidence 999999999887642 245566788999999999999999 999999999999999999999999999996654443
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT--GERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt--G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
+... ...+-+..|||||.+.-++++.+||||+||+++||+++ ...||....+ ...++....+.........
T Consensus 693 y~vq--gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-----e~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 693 YRVQ--GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-----EQVVENAGEFFRDQGRQVV 765 (807)
T ss_pred eeee--cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-----HHHHHhhhhhcCCCCccee
Confidence 3221 12234679999999999999999999999999999865 7888876433 2233333333222222111
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
+ ..+.-++..+.+++.+||..|-++||+++++...|++..
T Consensus 766 l------~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 766 L------SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred c------cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1 113345667889999999999999999999999988754
No 162
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-37 Score=312.17 Aligned_cols=248 Identities=19% Similarity=0.319 Sum_probs=193.9
Q ss_pred EEeecCCeeEEEEEeC---CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCc
Q 007088 313 IIGTGRTGATYIAMLP---GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGT 387 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 387 (618)
.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.++++++|+||+++++++.. +..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999753 45679999987543 234568999999999999999999998854 56799999999999
Q ss_pred cccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccc
Q 007088 388 LYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467 (618)
Q Consensus 388 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 467 (618)
|.+++.... ..+++..+++++.|++.||+|||++ +++||||||+||+++.++.+||+|||++............
T Consensus 81 L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSGKK---DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 999986533 3589999999999999999999999 9999999999999999999999999999865433221111
Q ss_pred cccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccc
Q 007088 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSL 546 (618)
Q Consensus 468 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 546 (618)
.....++..|+|||...+..++.++||||||+++||+++ |..||..... .+..........
T Consensus 155 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~--------- 216 (257)
T cd05115 155 -RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--------PEVMSFIEQGKR--------- 216 (257)
T ss_pred -cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHHCCCC---------
Confidence 111223578999999988889999999999999999996 9999875432 111111111110
Q ss_pred cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 547 LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
.........++.+++.+||..||++||++.+|.+.|+.+
T Consensus 217 -~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 217 -LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 011122345667788899999999999999999998865
No 163
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.5e-38 Score=327.86 Aligned_cols=240 Identities=20% Similarity=0.250 Sum_probs=190.2
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 380 (618)
+|++.+.||+|+||.||+|... +++.||+|++.... ...+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999954 57899999987532 2234566788888777 5899999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQVG----RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 9999999999886543 488999999999999999999999 999999999999999999999999999975432
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 154 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--------~~~~~i~~~~---- 217 (323)
T cd05616 154 DGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHN---- 217 (323)
T ss_pred CCCc----cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC----
Confidence 2211 12234899999999999999999999999999999999999999754321 1111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
. ..+.....++.+++.+|++.||.+|++.
T Consensus 218 -----~--~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 -----V--AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -----C--CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 0 0011123456677779999999999984
No 164
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.5e-38 Score=327.07 Aligned_cols=240 Identities=21% Similarity=0.269 Sum_probs=191.1
Q ss_pred cEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||++... +++.||+|+++... .....+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999954 57899999997532 2345567888888887 799999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 81 GDLMFHIQRSG----RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 99998886543 489999999999999999999999 99999999999999999999999999987532221111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ............ .
T Consensus 154 ----~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--------~~~~~~i~~~~~-------~ 214 (318)
T cd05570 154 ----STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--------DELFQSILEDEV-------R 214 (318)
T ss_pred ----cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--------HHHHHHHHcCCC-------C
Confidence 123488999999999999999999999999999999999999975331 111111111100 0
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTM-----FEVYQ 581 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 581 (618)
........+.+++.+||+.||.+||++ .++++
T Consensus 215 ----~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 215 ----YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ----CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 011123456777789999999999999 77754
No 165
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.8e-38 Score=328.89 Aligned_cols=236 Identities=24% Similarity=0.278 Sum_probs=185.9
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEIN-TLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|.. .+|+.||+|++.... ...+++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999995 478999999996532 22334555554 56789999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~- 152 (323)
T cd05575 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKT- 152 (323)
T ss_pred CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCc-
Confidence 99999886543 488999999999999999999999 9999999999999999999999999998753222111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+......... ..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~-------~~ 214 (323)
T cd05575 153 ---TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--------AEMYDNILNKP-------LR 214 (323)
T ss_pred ---cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCC-------CC
Confidence 1223489999999999999999999999999999999999999975322 11111111110 00
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMF 577 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 577 (618)
+. ......+.+++.+|++.||++||++.
T Consensus 215 ~~----~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 LK----PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CC----CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11 11234567777799999999999985
No 166
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.2e-37 Score=313.99 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=196.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|+..+.||+|+||.||+|.. .+++.||+|++.... ...+++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999984 578999999986542 3345688999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|..+. .+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~ 149 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence 9999986542 367888999999999999999999 99999999999999999999999999997654321
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
. ....++..|+|||++.+..++.++||||||+++|+|++|+.||......+... ...++........
T Consensus 150 ~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~------ 216 (279)
T cd06619 150 A------KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-MPLQLLQCIVDED------ 216 (279)
T ss_pred c------cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-chHHHHHHHhccC------
Confidence 1 12347899999999998899999999999999999999999997533221111 1111111111110
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+.+.. .....++.+++.+|++.||++||+++|+++.
T Consensus 217 ~~~~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 217 PPVLPV---GQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCC---CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011111 1123456778889999999999999999764
No 167
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=9.2e-39 Score=330.46 Aligned_cols=237 Identities=23% Similarity=0.267 Sum_probs=189.8
Q ss_pred cEEeecCCeeEEEEEe----CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 312 NIIGTGRTGATYIAML----PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
+.||+|+||.||++.. .+|+.||+|+++... .....+.+|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 467999999997532 233457789999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 82 GGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 999999986543 489999999999999999999999 9999999999999999999999999999765432211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||..... .+.........
T Consensus 155 ----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--------~~~~~~i~~~~-------- 214 (318)
T cd05582 155 ----AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--------KETMTMILKAK-------- 214 (318)
T ss_pred ----eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--------HHHHHHHHcCC--------
Confidence 1123489999999999988899999999999999999999999975322 11111111110
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFE 578 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 578 (618)
. ..+......+.+++.+||+.||++||++.+
T Consensus 215 -~--~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 215 -L--GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -C--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 0 001112245667777999999999999555
No 168
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.4e-37 Score=318.02 Aligned_cols=264 Identities=21% Similarity=0.335 Sum_probs=202.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCC-----------------CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccc
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPG-----------------GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVP 365 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~ 365 (618)
.++|++.+.||+|+||.||++...+ +..||+|.+.... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578899999999999999998532 2468999987543 34567889999999999999999
Q ss_pred eeEEEEeCCeeEEEEeecCCCccccccCCCCC-------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 007088 366 LLGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438 (618)
Q Consensus 366 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 438 (618)
+++++...+..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999999999999999999999999865441 123589999999999999999999999 99999999999
Q ss_pred eeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCC
Q 007088 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT--GERPTHLTN 516 (618)
Q Consensus 439 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt--G~~Pf~~~~ 516 (618)
|+++.++.++|+|||+++.......... .....++..|+|||+..+..++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRV--QGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceee--cCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 9999999999999999876543221111 112235678999999988889999999999999999998 677775432
Q ss_pred CCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 517 APESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 517 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.. ................ ...........++.+++.+|++.||++|||+.|+++.|+
T Consensus 239 ~~-----~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 239 DQ-----QVIENAGHFFRDDGRQ------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred hH-----HHHHHHHhcccccccc------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 11 1111111111000000 000111223357888888999999999999999999886
No 169
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.9e-38 Score=319.20 Aligned_cols=263 Identities=22% Similarity=0.307 Sum_probs=203.3
Q ss_pred CHHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEE---
Q 007088 297 RLSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCV--- 371 (618)
Q Consensus 297 ~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~--- 371 (618)
.++.+..+.++|++.+.||+|+||.||++.. .+++.+|+|.+........++.+|+.+++++ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3455666788999999999999999999985 5688999999876555556788999999999 6999999999884
Q ss_pred --eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEE
Q 007088 372 --AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 372 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
..+..++||||+++++|.+++.........+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEE
Confidence 33568999999999999988754322234588999999999999999999999 9999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccC
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS 524 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~ 524 (618)
+|||+++......... ....|+..|+|||++. +..++.++||||+||++|||++|+.||.......
T Consensus 166 ~dfg~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~----- 236 (286)
T cd06638 166 VDFGVSAQLTSTRLRR----NTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR----- 236 (286)
T ss_pred ccCCceeecccCCCcc----ccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-----
Confidence 9999998764322211 1234889999999875 3457889999999999999999999987543211
Q ss_pred HHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 525 LVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 525 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.... ..... .....++ ......+.+++.+||+.||++|||+.|+++.
T Consensus 237 --~~~~-~~~~~-~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 237 --ALFK-IPRNP-PPTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred --HHhh-ccccC-CCcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1100 00000 0000011 1122457788889999999999999999864
No 170
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.4e-37 Score=312.27 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=199.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc------CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH------SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|...+.||+|++|.||++.. .++..|++|.+..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788999999999999999995 5689999999864321 23468889999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|+||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG----ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 999999999999886543 488999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
........ ......++..|+|||++.+..++.++||||+|+++|||++|+.||...... ..... ......
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~-~~~~~~- 224 (263)
T cd06625 155 QTICSSGT-GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-------AAIFK-IATQPT- 224 (263)
T ss_pred cccccccc-cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-------HHHHH-HhccCC-
Confidence 43211111 011233678999999999988999999999999999999999998653221 11111 100000
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
...........+.+++.+||..+|.+|||+.|+++.
T Consensus 225 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 --------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 001111233456777789999999999999999863
No 171
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.4e-37 Score=318.34 Aligned_cols=264 Identities=20% Similarity=0.335 Sum_probs=201.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-----------------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccce
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-----------------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPL 366 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l 366 (618)
++|++.++||+|+||.||++... ++..||+|+++... ....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46889999999999999998532 24579999997543 334678999999999999999999
Q ss_pred eEEEEeCCeeEEEEeecCCCccccccCCCCC-------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCe
Q 007088 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEH-------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCI 439 (618)
Q Consensus 367 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 439 (618)
++++...+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 9999999999999999999999999865432 123478889999999999999999999 999999999999
Q ss_pred eeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCCC
Q 007088 440 LLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT--GERPTHLTNA 517 (618)
Q Consensus 440 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt--G~~Pf~~~~~ 517 (618)
+++.++.++|+|||+++.+....... ......++..|+|||...+..++.++|||||||++|||++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYR--IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred EEcCCCCEEeccCcccccccCCccee--ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 99999999999999998654322111 1111224578999998888889999999999999999998 7788864332
Q ss_pred CCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 518 PESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
.+ ................. ..........+.+++.+||+.||.+||++.||.+.|++
T Consensus 240 ~~-----~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQ-----VIENTGEFFRDQGRQVY------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HH-----HHHHHHHHHhhcccccc------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11 11111111000000000 01112233577888889999999999999999998863
No 172
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=9.5e-38 Score=312.13 Aligned_cols=249 Identities=21% Similarity=0.265 Sum_probs=199.9
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
+|++.+.||+|+||.||++.. .++..||+|.++.. ....+.+.+|+.++++++|+||+++++.+.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 477889999999999999995 46899999988542 234567889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++..... ..+++..++.++.|++.||.|||+. +|+|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQRG--KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 99999998865432 4578999999999999999999999 999999999999999999999999999976643222
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.. ....++..|+|||+..+..++.++||||||+++|+|++|+.||..... .......... ...
T Consensus 156 ~~----~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--------~~~~~~~~~~-~~~---- 218 (255)
T cd08219 156 YA----CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--------KNLILKVCQG-SYK---- 218 (255)
T ss_pred cc----ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--------HHHHHHHhcC-CCC----
Confidence 11 123378899999999888899999999999999999999999975321 1111111111 000
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.........+.+++.+||+.||++||++.|++..
T Consensus 219 -----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 -----PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -----CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0011123456778889999999999999999864
No 173
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8.8e-38 Score=317.30 Aligned_cols=261 Identities=23% Similarity=0.350 Sum_probs=205.1
Q ss_pred ccCHHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 007088 295 KMRLSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVA 372 (618)
Q Consensus 295 ~~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 372 (618)
..++.++....+.|+..+.||+|+||.||+|.. .+++.||+|++........++..|+.++.++ +|+||+++++++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 346677777889999999999999999999995 5689999999876655566788999999998 69999999999853
Q ss_pred ------CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc
Q 007088 373 ------KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446 (618)
Q Consensus 373 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 446 (618)
.+..+++|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 3577999999999999999875443 3578888999999999999999999 9999999999999999999
Q ss_pred eEEcccCcccccCCCCCcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 007088 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521 (618)
Q Consensus 447 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~ 521 (618)
++|+|||++.......... ....|+..|+|||.+. +..++.++|||||||++|||++|+.||.........
T Consensus 160 ~~l~dfg~~~~~~~~~~~~----~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~ 235 (282)
T cd06636 160 VKLVDFGVSAQLDRTVGRR----NTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL 235 (282)
T ss_pred EEEeeCcchhhhhccccCC----CcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh
Confidence 9999999987654322111 1234788999999875 356788999999999999999999999653321100
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .... .....+.. ......+.+++.+||+.||.+||++.|+++
T Consensus 236 -------~-~~~~------~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 -------F-LIPR------NPPPKLKS---KKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred -------h-hHhh------CCCCCCcc---cccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 0000 00111111 123346778888999999999999999875
No 174
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=9.6e-38 Score=316.83 Aligned_cols=257 Identities=22% Similarity=0.364 Sum_probs=200.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|+..++||+|+||.||++.. .++..+++|.+.... ...+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4577788999999999999973 235689999886543 345679999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCC-----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 379 VYSYLENGTLYDKLHPAEH-----------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
||||+++|+|.+++..... ....+++..++.++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999998865431 113588999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||++.......... ......+++.|+|||+..+..++.++|||||||++|||++ |+.||......
T Consensus 162 kL~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-------- 231 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYR--VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT-------- 231 (280)
T ss_pred EECCCCceeEcCCCceee--cCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--------
Confidence 999999997654322111 1111224678999999998899999999999999999998 99998653321
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
+........... .........+.+++.+||+.||.+||++.||++.|++
T Consensus 232 ~~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 232 EAIECITQGREL----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHHcCccC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 111111111000 0111223456778889999999999999999998863
No 175
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6.6e-38 Score=319.15 Aligned_cols=260 Identities=21% Similarity=0.254 Sum_probs=191.5
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcC---CCCCccceeEEEEeC-----C
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSV---RHRNLVPLLGFCVAK-----K 374 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~ 374 (618)
+|++.+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+.+++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 478889999999999999995 468999999986432 2234556777777665 799999999988652 3
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++||||+++ +|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 57899999975 88888865432 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
++........ ....+|..|+|||++.+..++.++||||+||++|||++|++||......+ .+.........
T Consensus 155 ~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~----~~~~~~~~~~~ 225 (288)
T cd07863 155 ARIYSCQMAL-----TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFDLIGL 225 (288)
T ss_pred cccccCcccC-----CCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH----HHHHHHHHhCC
Confidence 9866432211 12347889999999988899999999999999999999999986543211 11111111000
Q ss_pred ---CCcc------chhcccccc---CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 ---NSSL------ETAIDKSLL---GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ---~~~~------~~~~d~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+. .....+... ..........+.+++.+||+.||++|||+.|++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 226 PPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 000000000 0001122345678888999999999999999874
No 176
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-37 Score=321.07 Aligned_cols=261 Identities=24% Similarity=0.376 Sum_probs=203.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC--------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP--------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK 374 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 374 (618)
++|.+.+.||+|+||.||++... ....||+|.++... ....++.+|+.+++++ +||||+++++++...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 56888999999999999999742 24579999987543 2345688999999999 6999999999999988
Q ss_pred eeEEEEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 442 (618)
..++||||+++|+|.+++..... ....+++..+..++.|++.||.|||++ +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 99999999999999999865321 124589999999999999999999999 999999999999999
Q ss_pred CCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcc
Q 007088 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESF 521 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~ 521 (618)
.++.+||+|||.++........... ....++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---- 242 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKT--SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---- 242 (314)
T ss_pred CCCcEEEcccccccccccccccccc--ccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH----
Confidence 9999999999999876432211111 11124467999999988889999999999999999999 8888864321
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.+.......... . ........++.+++.+|++.||++||++.|+++.|+++...
T Consensus 243 ----~~~~~~~~~~~~-~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 243 ----EELFKLLREGHR-M---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred ----HHHHHHHHcCCC-C---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 111111111100 0 11122234667788899999999999999999999998664
No 177
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.7e-38 Score=318.89 Aligned_cols=263 Identities=24% Similarity=0.339 Sum_probs=205.9
Q ss_pred cCHHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 007088 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK 373 (618)
Q Consensus 296 ~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 373 (618)
+.+.++..++++|++.+.||+|+||.||++.. .+++.+|+|++.........+.+|+.++.++ +|||++++++++...
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 45567777889999999999999999999995 5789999999976555567788999999999 899999999998754
Q ss_pred -----CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceE
Q 007088 374 -----KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPK 448 (618)
Q Consensus 374 -----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 448 (618)
+..++||||+++|+|.++++........+++..++.++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 357999999999999998864332234689999999999999999999999 999999999999999999999
Q ss_pred EcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC-----CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc
Q 007088 449 LSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-----VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG 523 (618)
Q Consensus 449 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~ 523 (618)
|+|||++.......... ....++..|+|||.+... .++.++|||||||++|||++|+.||......+
T Consensus 169 l~dfg~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~---- 240 (291)
T cd06639 169 LVDFGVSAQLTSTRLRR----NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK---- 240 (291)
T ss_pred Eeecccchhcccccccc----cCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH----
Confidence 99999988654322211 122378899999987543 36889999999999999999999997533211
Q ss_pred CHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 524 SLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+..+ ... ......+ .......+.+++.+|++.+|++||++.|+++
T Consensus 241 ~~~~~----~~~-~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 TLFKI----PRN-PPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHH----hcC-CCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111 000 0001101 1123346778888999999999999999975
No 178
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.3e-37 Score=313.70 Aligned_cols=257 Identities=23% Similarity=0.392 Sum_probs=201.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CC---cEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GG---CFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
+.|.+.+.||+|+||.||+|... ++ ..|++|.++.. ....++|..|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34777899999999999999954 23 46999998753 23456799999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 99999999999987543 3589999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCccc-ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 460 PVDTHLS-TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 460 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
....... ....+...+..|+|||++.+..++.++|||||||++||+++ |..||...... ....+.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-----~~~~~i~---~~~~ 229 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVINAIE---QDYR 229 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-----HHHHHHH---cCCc
Confidence 3222111 10111112457999999998899999999999999999886 99998653321 1112211 1100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
. ....+.+..+.+++.+|++.+|.+||++++++..|+++
T Consensus 230 ~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 L----------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred C----------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 01112334577888899999999999999999998875
No 179
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.4e-38 Score=317.88 Aligned_cols=263 Identities=20% Similarity=0.300 Sum_probs=201.9
Q ss_pred cCCCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERL 377 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 377 (618)
.|++.+.||+|+||.||++.. .++..||+|.++... ...+.+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999973 357899999986432 3345789999999999999999999998775 5678
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++.
T Consensus 85 lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEccCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccc
Confidence 9999999999999986543 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCC-------ccccCHHHHHH
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE-------SFKGSLVEWIT 530 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~-------~~~~~l~~~~~ 530 (618)
........ .......++..|+|||.+.+..++.++||||||+++|||++++.|+....... ........+..
T Consensus 159 ~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 159 IETDKEYY-TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred cccCccce-eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 65432211 11122336678999999888889999999999999999999887654321100 00011111111
Q ss_pred HHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 531 LLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 531 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
...... ...........+.+++.+|++.||++||+++++++.|+++
T Consensus 238 ~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGK----------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCc----------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111110 0011122345678888899999999999999999999876
No 180
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.6e-38 Score=328.02 Aligned_cols=240 Identities=24% Similarity=0.276 Sum_probs=186.4
Q ss_pred cEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEIN-TLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|... +++.||+|++.... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999954 67889999986532 22234444444 56788999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~- 152 (325)
T cd05602 81 GELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGT- 152 (325)
T ss_pred CcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCC-
Confidence 99999887543 378888999999999999999999 9999999999999999999999999999754322211
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +......... . .
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~-~------~ 214 (325)
T cd05602 153 ---TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNKP-L------Q 214 (325)
T ss_pred ---cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCC-c------C
Confidence 12234899999999999999999999999999999999999999753321 1111111110 0 0
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .......+.+++.+|++.||.+||++.+.+.
T Consensus 215 ~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 215 L----KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred C----CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 0 0112335666777999999999999875443
No 181
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=297.86 Aligned_cols=252 Identities=21% Similarity=0.326 Sum_probs=202.5
Q ss_pred HhhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc-----cC----HHHHHHHHHHHhcC-CCCCccceeEEEE
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ-----HS----EKEFLSEINTLGSV-RHRNLVPLLGFCV 371 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----~~----~~~~~~E~~~l~~l-~h~niv~l~~~~~ 371 (618)
..-+.|...+.+|.|..++|-++. .++|..+|+|++.... .. .+.-.+|+.+|+++ .||+|+++.++|+
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 345678888999999999999888 5678889999885321 11 23457899999998 6999999999999
Q ss_pred eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcc
Q 007088 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSD 451 (618)
Q Consensus 372 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 451 (618)
.+...++|+|.|+.|.|++++... ..+++....+|++|+..|++|||.. +||||||||+|||+|++.++||+|
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~----VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSK----VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhh----eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEec
Confidence 999999999999999999999865 4599999999999999999999999 999999999999999999999999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCCC------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR------TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l 525 (618)
||+|..+.+... .+..+||++|.|||.+. ...|+...|+||+|||+|.|+.|.+||..... .+
T Consensus 167 FGFa~~l~~Gek-----LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ------ml 235 (411)
T KOG0599|consen 167 FGFACQLEPGEK-----LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ------ML 235 (411)
T ss_pred cceeeccCCchh-----HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH------HH
Confidence 999998865432 34456999999999765 34688899999999999999999999975221 00
Q ss_pred HHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+..+.. . . ......+.+......+|+.+||+.||.+|.|++|+++
T Consensus 236 --MLR~ImeG-k-y-----qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 236 --MLRMIMEG-K-Y-----QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred --HHHHHHhc-c-c-----ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 01111110 0 0 1122334455566777888999999999999999975
No 182
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.9e-38 Score=323.72 Aligned_cols=264 Identities=18% Similarity=0.249 Sum_probs=195.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|.+.+.||+|+||.||+|+. .+++.||+|.++... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 5688899999999999999995 467899999986432 3344677899999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDCG---NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 975 8888776543 3478999999999999999999999 99999999999999999999999999997644322
Q ss_pred CcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH--------HHHHHHHh
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL--------VEWITLLN 533 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l--------~~~~~~~~ 533 (618)
... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+...... ..|.. ..
T Consensus 159 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 233 (309)
T cd07872 159 KTY----SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG-IS 233 (309)
T ss_pred ccc----ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh-hc
Confidence 211 12347889999998764 568899999999999999999999997644321110000 00100 00
Q ss_pred cCCccchhccccccCC----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLLGN----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
........-.+..... .......++.+++.+||+.||.+|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000000000000 00112345667888999999999999999986
No 183
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.3e-37 Score=325.22 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=200.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeC-Ce
Q 007088 306 NSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK-KE 375 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 375 (618)
++|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+|+.++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5788999999999999999973 356899999997543 2345688999999999 689999999988654 45
Q ss_pred eEEEEeecCCCccccccCCCCC----------------------------------------------------------
Q 007088 376 RLLVYSYLENGTLYDKLHPAEH---------------------------------------------------------- 397 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 397 (618)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999988764321
Q ss_pred -----CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCC
Q 007088 398 -----EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGE 472 (618)
Q Consensus 398 -----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 472 (618)
....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........... ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~ 241 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR--KGDA 241 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhh--cCCC
Confidence 012478888999999999999999999 999999999999999999999999999986533221111 1112
Q ss_pred CCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCC
Q 007088 473 FGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGF 551 (618)
Q Consensus 473 ~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 551 (618)
.++..|+|||.+.+..++.++||||||+++|||++ |..||....... ....... ...... ..
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~-~~~~~~---------~~ 304 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------EFCRRLK-EGTRMR---------AP 304 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-------HHHHHHh-ccCCCC---------CC
Confidence 25678999999988899999999999999999997 999986532210 1111111 110000 00
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 552 DGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 552 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
......+.+++.+||+.||++||++.|+++.|+.+.+
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1112357788889999999999999999999998865
No 184
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.4e-37 Score=310.49 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=192.4
Q ss_pred cEEeecCCeeEEEEEeC----CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeeEEEEeecC
Q 007088 312 NIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVA-KKERLLVYSYLE 384 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV~e~~~ 384 (618)
+.||+|+||.||+|... +...||+|++.... ...+.+.+|+.+++.++||||+++++++.. ++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999843 24679999985432 334678899999999999999999998764 456789999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+|+|.+++.... ...++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSET---HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 999999987543 2367888899999999999999999 9999999999999999999999999999765432211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITG-ERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG-~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.........++..|+|||...+..++.++||||||+++|||++| .+||..... .............
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--------~~~~~~~~~~~~~----- 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--------FDITVYLLQGRRL----- 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhcCCCC-----
Confidence 11111122356789999999888899999999999999999995 455543211 1111111111100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
......+..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 222 -----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 -----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0011123467788889999999999999999999998753
No 185
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.3e-37 Score=329.06 Aligned_cols=263 Identities=20% Similarity=0.258 Sum_probs=195.4
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eeE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-----ERL 377 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 377 (618)
+|+..+.||+|+||.||++.. .+++.||+|++.... ...+++.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999995 578999999986532 23467889999999999999999999998776 789
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+. ++|.+.+... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP----QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999997 4788777543 3489999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc--------CHHHH
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG--------SLVEW 528 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~--------~l~~~ 528 (618)
....... ......++..|+|||++.+. .++.++||||+||++|||++|+.||......+.... ....+
T Consensus 153 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 229 (372)
T cd07853 153 EEPDESK---HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM 229 (372)
T ss_pred cccCccc---cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 5432211 11223478899999988764 478999999999999999999999976443211000 00000
Q ss_pred H-------HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 529 I-------TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 529 ~-------~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
. ............. ..+ ..........+.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 230 RSACEGARAHILRGPHKPPSL-PVL-YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHhhHHHHHHHHhCCCCCCch-HHh-cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 0000000000000 000 00011123457788889999999999999999863
No 186
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.3e-37 Score=309.74 Aligned_cols=250 Identities=28% Similarity=0.427 Sum_probs=201.5
Q ss_pred cEEeecCCeeEEEEEeCC----CcEEEEEEeccCccC--HHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAMLPG----GCFIMIKRLEDSQHS--EKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|.... +..|++|.++..... .+.+.+|++.+.+++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999643 889999999765433 57889999999999999999999999998999999999999
Q ss_pred CccccccCCCCCC-----CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 386 GTLYDKLHPAEHE-----VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 386 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
++|.+++...... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999875211 25699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.... .......++..|+|||.+....++.++||||+|+++|||++ |..||..... .+..........
T Consensus 158 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~-- 225 (262)
T cd00192 158 DDYY--RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLEYLRKGYR-- 225 (262)
T ss_pred cccc--ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 3321 11123346889999999988889999999999999999999 6999876422 111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
..........+.+++.+|++.+|++|||+.|+++.|+
T Consensus 226 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 --------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111222456778888999999999999999998763
No 187
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.2e-37 Score=331.03 Aligned_cols=263 Identities=18% Similarity=0.202 Sum_probs=195.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
..+|.+.+.||+|+||.||++... .++.||+|.... ..+.+|++++++++|+||+++++++...+..++|||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence 346899999999999999999964 578999996432 34678999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
. ++|.+++.... ..+++..++.|+.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 243 ~-~~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 243 R-SDLYTYLGARL---RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred C-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 5 68888876543 3599999999999999999999999 999999999999999999999999999986543221
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc---ccCHHHHHHHHhcC-Cccc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF---KGSLVEWITLLNTN-SSLE 539 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~---~~~l~~~~~~~~~~-~~~~ 539 (618)
.. ......||..|+|||++.+..++.++|||||||++|||++|..|+......... ...+...+...... ....
T Consensus 316 ~~--~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 316 TP--FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cc--cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 11 112335899999999999999999999999999999999988776443221111 11111111111100 0000
Q ss_pred hhc----------------cccccCCCCH---HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAI----------------DKSLLGNGFD---GELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~----------------d~~l~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... .+......+. .....+.+++.+||+.||.+|||+.|+++
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 000 0000000000 11235677888999999999999999986
No 188
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.4e-37 Score=315.88 Aligned_cols=265 Identities=23% Similarity=0.332 Sum_probs=206.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-----CCcEEEEEEeccCccC--HHHHHHHHHHHhcCCCCCccceeEEEEe--CCee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-----GGCFIMIKRLEDSQHS--EKEFLSEINTLGSVRHRNLVPLLGFCVA--KKER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 376 (618)
+.|+..+.||+|+||.||++... ++..||+|.++..... .+.+.+|++++++++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35777889999999999999853 3689999999865543 6789999999999999999999999877 5578
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR---DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc---cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 99999999999999997654 2589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc-------ccCHHHHH
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF-------KGSLVEWI 529 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~-------~~~l~~~~ 529 (618)
.......... ......++..|+|||...+..++.++||||||+++|||++|+.|+......... ......+.
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 158 VLPEDKDYYY-VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred ccccCCccee-ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 7653222111 111123456799999998889999999999999999999999998653221100 00111111
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
....... ...........+.+++.+|++.+|++||++.||+++|+.++
T Consensus 237 ~~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 237 ELLKEGE----------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHHcCC----------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1111111 01111223356888888999999999999999999999863
No 189
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=326.42 Aligned_cols=262 Identities=23% Similarity=0.377 Sum_probs=221.0
Q ss_pred cCCCCcEEeecCCeeEEEEEeCC-CcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+....++||-|.||.||.|.++. ...||||.++.+....++|..|..+|+.++|||+|+++|+|.....+|||+|||..
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 45557899999999999999765 57899999999888899999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+||..... ..++.-..+.++.||..|++||..+ ++|||||.++|.|+.++..+|++|||+++.+.......
T Consensus 348 GNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA 422 (1157)
T KOG4278|consen 348 GNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA 422 (1157)
T ss_pred ccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence 999999987654 4577777899999999999999999 99999999999999999999999999999987543221
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
. .+.--...|.|||-+....++.|+|||+|||+|||+.| |..||...+ +.+. ...+.+
T Consensus 423 H---AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid--------lSqV----------Y~LLEk 481 (1157)
T KOG4278|consen 423 H---AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQV----------YGLLEK 481 (1157)
T ss_pred c---cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc--------HHHH----------HHHHhc
Confidence 1 11123568999999999999999999999999999998 888886532 2222 223333
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCC
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTT 594 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (618)
..+.+.+..++..+.+|+++||+.+|.+||++.|+.+.++.+-..-..++
T Consensus 482 gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSisd 531 (1157)
T KOG4278|consen 482 GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSISD 531 (1157)
T ss_pred cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccccccH
Confidence 44455567788899999999999999999999999999988766544444
No 190
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8.6e-38 Score=326.89 Aligned_cols=198 Identities=25% Similarity=0.326 Sum_probs=175.5
Q ss_pred cCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-C-----CCccceeEEEEeCCeeEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-H-----RNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~lV 379 (618)
+|++.+.||+|.||.|-+|. ..+++.||||+++....-..+-..|+.+|..++ | -|+|+++++|...++.|||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 89999999999999999999 567999999999988777777888999999996 4 4899999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC--CceEEcccCcccc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD--FEPKLSDFGLARL 457 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfG~a~~ 457 (618)
+|.+.. +|.++++.+.. ..++...+..|+.||+.||.+||+. +|||+||||+||||.+. ..+||+|||.|..
T Consensus 267 fELL~~-NLYellK~n~f--~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 267 FELLST-NLYELLKNNKF--RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred ehhhhh-hHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 999965 99999988766 5699999999999999999999999 99999999999999644 3699999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
..+... ...-+..|+|||++.|.+|+.+.||||||||+.||++|.+.|.+.++
T Consensus 341 ~~q~vy-------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 341 ESQRVY-------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred cCCcce-------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 654332 12257889999999999999999999999999999999888876543
No 191
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.2e-37 Score=309.32 Aligned_cols=249 Identities=23% Similarity=0.372 Sum_probs=202.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC-CcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
++|+..+.||+|++|.||+|...+ +..|++|.+..... .+++.+|++++++++|+||+++++++.+....++++||++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 578889999999999999999654 78999999876533 6789999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++.........
T Consensus 82 ~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (256)
T cd06612 82 AGSVSDIMKITN---KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK 155 (256)
T ss_pred CCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence 999999986543 4589999999999999999999999 9999999999999999999999999999876543221
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
. ....++..|+|||++.+..++.++||||||+++|+|++|+.||........ .. .. .... .+
T Consensus 156 ~----~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-------~~-~~-~~~~-----~~ 217 (256)
T cd06612 156 R----NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-------IF-MI-PNKP-----PP 217 (256)
T ss_pred c----ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-------hh-hh-ccCC-----CC
Confidence 1 112368899999999888999999999999999999999999975332110 00 00 0000 00
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+ .........+.+++.+|++.||++|||+.|+++
T Consensus 218 ~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 218 TL--SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CC--CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 011122346777888999999999999999975
No 192
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.6e-37 Score=327.51 Aligned_cols=259 Identities=19% Similarity=0.220 Sum_probs=198.2
Q ss_pred HHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 007088 298 LSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372 (618)
Q Consensus 298 ~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 372 (618)
+.++....++|++.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|+.+++.++||||+++++.+.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 344555678999999999999999999995 468899999986422 233457889999999999999999999999
Q ss_pred CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 373 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
.+..++||||+++|+|.+++... .++...+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 99999999999999999998643 378888999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCC----CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL----VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+. ...
T Consensus 187 G~a~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~ 255 (371)
T cd05622 187 GTCMKMNKEGMVR---CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGT 255 (371)
T ss_pred CceeEcCcCCccc---ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH--------HHH
Confidence 9998764322111 1234589999999988654 378999999999999999999999975332 111
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKE--RHTMFEVYQL 582 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 582 (618)
.............. ........+.+++.+|+..++.+ ||+++|+++.
T Consensus 256 ~~~i~~~~~~~~~~-------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 256 YSKIMNHKNSLTFP-------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred HHHHHcCCCcccCC-------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11111111100000 01112334556666999744433 7889888764
No 193
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=307.85 Aligned_cols=280 Identities=24% Similarity=0.349 Sum_probs=213.6
Q ss_pred cccCHHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhc--CCCCCccceeEEEE
Q 007088 294 EKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGS--VRHRNLVPLLGFCV 371 (618)
Q Consensus 294 ~~~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~ 371 (618)
..+++---....++....+.||+|.||.||+|.+ .|..||||++... +++...+|.++.+. ++|+||+.+++.-.
T Consensus 199 SGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~ 275 (513)
T KOG2052|consen 199 SGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADN 275 (513)
T ss_pred CCchhHhHHhhhheeEEEEEecCccccceeeccc-cCCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccc
Confidence 3444444555667788899999999999999998 5778999999653 45567778777766 49999999998865
Q ss_pred eCC----eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCceecCCCCCCeeeC
Q 007088 372 AKK----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHN-----CNPRIIHRNISSKCILLD 442 (618)
Q Consensus 372 ~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~ 442 (618)
.++ +.|||++|.+.|||+|||... .++....++++..+|.||++||.. .+|.|.|||||+.|||+.
T Consensus 276 ~~~gs~TQLwLvTdYHe~GSL~DyL~r~-----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK 350 (513)
T KOG2052|consen 276 KDNGSWTQLWLVTDYHEHGSLYDYLNRN-----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 350 (513)
T ss_pred cCCCceEEEEEeeecccCCcHHHHHhhc-----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc
Confidence 543 679999999999999999764 489999999999999999999975 468999999999999999
Q ss_pred CCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCC------CCCccchHHHHHHHHHHHhC--------
Q 007088 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV------ATPKGDVYSFGVVLLELITG-------- 508 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDVwS~Gvil~elltG-------- 508 (618)
+++.+.|+|+|+|..............+.++||.+|||||++.... .-..+||||||.++||+...
T Consensus 351 kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~e 430 (513)
T KOG2052|consen 351 KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVE 430 (513)
T ss_pred cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEeh
Confidence 9999999999999887765555555667788999999999876432 12469999999999999752
Q ss_pred --CCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 509 --ERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 509 --~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
+.||.+.-+.+.....+.+ ..=..++...++.++ ...+.+..+.++++.||..+|..|-|+=.+-+.|.++
T Consensus 431 ey~~Pyyd~Vp~DPs~eeMrk----VVCv~~~RP~ipnrW---~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 431 EYQLPYYDVVPSDPSFEEMRK----VVCVQKLRPNIPNRW---KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred hhcCCcccCCCCCCCHHHHhc----ceeecccCCCCCccc---ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 3566543322111111111 000111111111111 1346888999999999999999999999999999888
Q ss_pred hh
Q 007088 587 AE 588 (618)
Q Consensus 587 ~~ 588 (618)
.+
T Consensus 504 ~~ 505 (513)
T KOG2052|consen 504 SN 505 (513)
T ss_pred hc
Confidence 64
No 194
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.7e-38 Score=327.97 Aligned_cols=240 Identities=24% Similarity=0.281 Sum_probs=187.3
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEIN-TLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|.. .+|+.||+|++.... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999994 578999999996532 22344555655 46778999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|..++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~- 152 (325)
T cd05604 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT- 152 (325)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCC-
Confidence 99998886543 489999999999999999999999 9999999999999999999999999998753221111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +......... . .
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~~~~~~-~------~ 214 (325)
T cd05604 153 ---TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--------EMYDNILHKP-L------V 214 (325)
T ss_pred ---cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--------HHHHHHHcCC-c------c
Confidence 12234899999999999999999999999999999999999999754321 1111111110 0 0
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+. ......+.+++.+|++.||.+||++++.++
T Consensus 215 ~~----~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 215 LR----PGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred CC----CCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 01 112235667777999999999998864433
No 195
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=307.30 Aligned_cols=251 Identities=22% Similarity=0.257 Sum_probs=202.0
Q ss_pred cCCCCcEEeecCCeeEEEEEeCC-CcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.|+..+.||+|.-|+||++.+.+ +..+|+|++.+.. ....+.+.|-+||+.++||.++.+|..++.++..|+|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45557889999999999999654 5899999997643 233456789999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
||+||+|..+.+.+.. ..+++..+.-++.+++-||+|||-. |||.|||||+||||-++|++-|+||.++......
T Consensus 158 yCpGGdL~~LrqkQp~--~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPG--KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred cCCCccHHHHHhhCCC--CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999987765 6799999999999999999999999 9999999999999999999999999988654210
Q ss_pred CC------------------------------c-c---------------------cccccCCCCcccccCCCCCCCCCC
Q 007088 462 DT------------------------------H-L---------------------STFVNGEFGDLGYVAPEYPRTLVA 489 (618)
Q Consensus 462 ~~------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~ 489 (618)
.. . . ....+.-+||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00 0 0 001112359999999999999999
Q ss_pred CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCC
Q 007088 490 TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPT 569 (618)
Q Consensus 490 ~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~d 569 (618)
+.++|.|+|||++|||+.|..||...+..+.... ++-+.+...........+.+||++.|.+|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~N-----------------Iv~~~l~Fp~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRN-----------------IVGQPLKFPEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHH-----------------HhcCCCcCCCCCcchhHHHHHHHHHhccC
Confidence 9999999999999999999999998765433221 11222221222234456677888999999
Q ss_pred CCCCCC----HHHH
Q 007088 570 PKERHT----MFEV 579 (618)
Q Consensus 570 P~~RPs----~~ev 579 (618)
|++|.. ++||
T Consensus 376 P~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEI 389 (459)
T ss_pred hhhhhccccchHHh
Confidence 999987 6665
No 196
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8.7e-38 Score=323.76 Aligned_cols=240 Identities=20% Similarity=0.244 Sum_probs=190.1
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 380 (618)
+|+..+.||+|+||.||+|.. .+++.||+|++.... ...+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467789999999999999995 568999999987532 23355778888888885 577888999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQVG----KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 9999999999886543 489999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...........
T Consensus 154 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~--- 218 (323)
T cd05615 154 DGVT----TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNV--- 218 (323)
T ss_pred CCcc----ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC---
Confidence 2211 12234899999999999889999999999999999999999999754321 11111111100
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
. .+......+.+++.+||+.||.+|++.
T Consensus 219 ----~----~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 ----S----YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ----C----CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0 011123456677789999999999985
No 197
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.9e-37 Score=324.78 Aligned_cols=198 Identities=26% Similarity=0.347 Sum_probs=167.7
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK----- 374 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 374 (618)
..++|+..+.||+|+||.||++.. .+|..||+|++... ......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999995 56899999999653 233456789999999999999999999986543
Q ss_pred -eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 375 -ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 375 -~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 46899999976 5666553 2378889999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
+++....... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+
T Consensus 169 ~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~ 226 (359)
T cd07876 169 LARTACTNFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 226 (359)
T ss_pred CccccccCcc-----CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 9976432211 122347899999999999999999999999999999999999997643
No 198
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.5e-37 Score=316.69 Aligned_cols=258 Identities=23% Similarity=0.375 Sum_probs=202.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|+..+.||+|+||.||+|... ++..||+|++.... ...+++.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467888999999999999999853 46889999987543 2346788999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCC------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 007088 377 LLVYSYLENGTLYDKLHPAEH------------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 438 (618)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 999999999999999864321 123578899999999999999999999 99999999999
Q ss_pred eeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCC
Q 007088 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNA 517 (618)
Q Consensus 439 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~ 517 (618)
|+++.++.++|+|||++........... ......+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKA--SENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccc--cCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999876543221110 111224567999999988899999999999999999997 8888864321
Q ss_pred CCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 518 PESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
.+........ ... .........+.+++.+|++.||++|||+.|+++.|++
T Consensus 239 --------~~~~~~~~~~-~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 --------EEVIYYVRDG-NVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --------HHHHHHHhcC-CCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1222221111 110 0011233567788889999999999999999999873
No 199
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.3e-38 Score=325.91 Aligned_cols=236 Identities=23% Similarity=0.286 Sum_probs=185.3
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEIN-TLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|+. .+++.||+|++.... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 468999999986532 22334555554 57889999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~- 152 (321)
T cd05603 81 GELFFHLQRER----CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET- 152 (321)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCc-
Confidence 99988886433 488899999999999999999999 9999999999999999999999999998753222111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ...........
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~--------- 212 (321)
T cd05603 153 ---TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--------SQMYDNILHKP--------- 212 (321)
T ss_pred ---cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--------HHHHHHHhcCC---------
Confidence 1223489999999999988999999999999999999999999975321 11111111110
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMF 577 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 577 (618)
+ .........+.+++.+||+.||.+||++.
T Consensus 213 ~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 213 L--QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred C--CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 0 01112234567778899999999999864
No 200
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.6e-37 Score=309.30 Aligned_cols=249 Identities=25% Similarity=0.370 Sum_probs=197.9
Q ss_pred cEEeecCCeeEEEEEeCC--C--cEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAMLPG--G--CFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|++|.||+|...+ + ..||+|.+..... ..+.+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998533 3 3699999976543 45678999999999999999999999988 888999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999876542 4589999999999999999999999 99999999999999999999999999998765433221
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
... ....++..|+|||++.+..++.++|||||||++|||++ |+.||...... +............
T Consensus 155 ~~~-~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~----- 220 (257)
T cd05040 155 VME-EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--------QILKKIDKEGERL----- 220 (257)
T ss_pred ecc-cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHhcCCcC-----
Confidence 111 12336788999999998899999999999999999998 99998643221 1111111111000
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
......+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 221 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ----ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011123456778888999999999999999999875
No 201
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.6e-37 Score=316.10 Aligned_cols=250 Identities=25% Similarity=0.297 Sum_probs=196.7
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.|+..+.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.++++++|++|+++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 367788999999999999995 568999999986532 223457789999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred ecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 9999999998854332 3589999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
... ....|+..|+|||++.+..++.++||||||+++|||++|+.||....... ........... .
T Consensus 156 ~~~-----~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-----~~~~~~~~~~~--~--- 220 (285)
T cd05630 156 QTI-----KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-----KREEVERLVKE--V--- 220 (285)
T ss_pred ccc-----cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-----hHHHHHhhhhh--h---
Confidence 211 12348999999999999899999999999999999999999997543211 00001100000 0
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
.... .......+.+++.+||+.||++||| ++|+++
T Consensus 221 -~~~~----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 221 -QEEY----SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -hhhc----CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0001 1112234667777999999999999 788876
No 202
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.3e-37 Score=326.98 Aligned_cols=260 Identities=18% Similarity=0.209 Sum_probs=197.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC---CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP---GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
..+|.+.+.||+|+||.||++... .+..|++|.+... +...+|++++++++||||+++++++......++|||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 357999999999999999999743 3578999988653 235689999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+. ++|.+++... ..+++..++.++.||+.||.|||+. +|+||||||+|||++.++.++|+|||+++.....
T Consensus 167 ~~~-~~l~~~l~~~----~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 167 KYK-CDLFTYVDRS----GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred hcC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 996 5888888433 3589999999999999999999999 9999999999999999999999999999766543
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC-----
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS----- 536 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~----- 536 (618)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...........
T Consensus 239 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 239 PDTP--QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS-SSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred cccc--cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC-cHHHHHHHHHHhccCccccCC
Confidence 2211 1123458999999999999999999999999999999999999997654321 1111111111110000
Q ss_pred -----------------ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 537 -----------------SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 537 -----------------~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.........+... ....++.+++.+||..||++|||+.|++..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKY---GMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhcc---CcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000000 112456677889999999999999999764
No 203
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.8e-37 Score=318.18 Aligned_cols=274 Identities=19% Similarity=0.255 Sum_probs=200.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|.+.+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 4688899999999999999985 468899999986432 3345678899999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDCG---NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 97 58988886543 3488999999999999999999999 99999999999999999999999999997643322
Q ss_pred CcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc--------CHHHHHHHHh
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG--------SLVEWITLLN 533 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~--------~l~~~~~~~~ 533 (618)
.. .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...+..+.... ....|... .
T Consensus 159 ~~----~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 233 (301)
T cd07873 159 KT----YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI-L 233 (301)
T ss_pred Cc----ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh-h
Confidence 11 112236889999998765 4578899999999999999999999975432110000 00000000 0
Q ss_pred cCCccchhccccccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHhhhhcC
Q 007088 534 TNSSLETAIDKSLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ--LLRAIAERYH 591 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~~~~ 591 (618)
........-.+....+. .......+.+++.+|++.||.+|||++|+++ .++.+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~~ 297 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIH 297 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchhh
Confidence 00000000000000000 0112335667888999999999999999986 5555555544
No 204
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4e-37 Score=315.04 Aligned_cols=249 Identities=26% Similarity=0.367 Sum_probs=200.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|++|.||++.. .+++.||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36788999999999999999994 578999999986543 3445688999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++... .+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 98 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 9999999988542 378999999999999999999999 99999999999999999999999999987654332
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ....+++.|+|||...+..++.++|||||||++|++++|+.||........... .....
T Consensus 170 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~--------~~~~~------ 231 (297)
T cd06656 170 SKR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--------IATNG------ 231 (297)
T ss_pred cCc----CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee--------eccCC------
Confidence 211 122378899999999988899999999999999999999999975432111000 00000
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+. ..........+.+++.+||+.+|++||++.++++
T Consensus 232 ~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 232 TPE--LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCC--CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0011222345667778999999999999999987
No 205
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4e-37 Score=310.39 Aligned_cols=256 Identities=21% Similarity=0.315 Sum_probs=201.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC----CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG----GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
++|...+.||+|+||.||+|...+ ...|++|...... ...+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999998533 3578999886543 345678999999999999999999999875 457899
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 85 MELAPLGELRSYLQVNK---YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEcCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence 99999999999996543 3489999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
........ ...++..|+|||.+....++.++||||||+++||+++ |..||...... ....+. ......
T Consensus 159 ~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~---~~~~~~ 227 (270)
T cd05056 159 DESYYKAS---KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DVIGRI---ENGERL 227 (270)
T ss_pred cccceecC---CCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHH---HcCCcC
Confidence 43221111 1224568999999988889999999999999999986 99999754321 111111 111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.........+.+++.+|+..+|.+|||+.++++.|+++..+
T Consensus 228 ----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 ----------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01112234677788899999999999999999999998653
No 206
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5.5e-37 Score=311.02 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=203.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CC----cEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GG----CFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.+|++.+.||+|+||.||+|... +| ..||+|.+.... ....++.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46788899999999999999853 33 368999887653 234678899999999999999999999987 78899
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 86 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK---DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 999999999999987654 3489999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ .....++..|+|||......++.++||||||+++||+++ |+.||..... .++.........
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~ 229 (279)
T cd05057 160 DVDEKEYH--AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------VEIPDLLEKGER 229 (279)
T ss_pred cCccccee--cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhCCCC
Confidence 54322211 112224568999999988889999999999999999998 9999875322 112211111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
. ..+......+.+++.+||..||.+||++.++++.|+++.++
T Consensus 230 ~----------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 230 L----------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred C----------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 0 00111224567788899999999999999999999998664
No 207
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.3e-37 Score=315.81 Aligned_cols=257 Identities=23% Similarity=0.338 Sum_probs=198.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|++.+.||+|+||.||++.. .++..+++|.++... ....++.+|++++.+++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688899999999999999995 468889999886532 2345688999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++.... .+++..+..++.|+++||.|||+.. +++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 81 MDGGSLDQVLKKAG----RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 99999999997543 4889999999999999999999732 89999999999999999999999999987653321
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc----
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL---- 538 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~---- 538 (618)
. ....++..|+|||.+.+..++.++||||||+++|||++|+.||...+... ...+..........
T Consensus 155 ~------~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 223 (308)
T cd06615 155 A------NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-----LEAMFGRPVSEGEAKESH 223 (308)
T ss_pred c------ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-----HHHhhcCccccccccCCc
Confidence 1 12347889999999988889999999999999999999999986433111 11111000000000
Q ss_pred ----------------chhc-------cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 539 ----------------ETAI-------DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 539 ----------------~~~~-------d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+.. .+.+.. ......+.+++.+||+.||++||++.|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 224 RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPS---GAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccccCCCCCccchhhHHHHHHHHhcCCCccCcC---cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 000000 0123457788889999999999999999865
No 208
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=320.95 Aligned_cols=249 Identities=23% Similarity=0.323 Sum_probs=205.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 378 (618)
...|+..+.||+|.||.||+++.+ +|+.+|+|.+.+.. .....+.+|+.+|+++. |||||.++++|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456888899999999999999955 49999999997643 24468999999999998 9999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC----CceEEcccCc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD----FEPKLSDFGL 454 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~ 454 (618)
|||++.||.|.+.+... .+++..+..++.|++.+++|||+. ||+||||||+|+|+... +.+|++|||+
T Consensus 114 vmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 99999999999999765 289999999999999999999999 99999999999999633 5799999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
+..... ... ....+||+.|+|||++....|+.++||||+||++|.|++|.+||.......... .....
T Consensus 186 a~~~~~-~~~----~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~ 253 (382)
T KOG0032|consen 186 AKFIKP-GER----LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRG 253 (382)
T ss_pred ceEccC-Cce----EeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcC
Confidence 998765 222 234459999999999999999999999999999999999999998765322111 11111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+ .......++.......+++..|+..||.+|+|+.++++
T Consensus 254 ~--------~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 254 D--------FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred C--------CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 1 01222333444455666666999999999999999998
No 209
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.4e-37 Score=314.71 Aligned_cols=249 Identities=23% Similarity=0.250 Sum_probs=195.6
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
|+..+.||+|+||.||++.. .+++.||+|.+.... .....+.+|++++++++|+||+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66778999999999999995 578999999986532 2234578899999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN--PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 999999988865432 3599999999999999999999999 99999999999999999999999999987654321
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
. .....|+..|+|||++.+..++.++|+||||+++|||++|+.||....... ............. .
T Consensus 157 ~-----~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~----~~~~~~~~~~~~~---~-- 222 (285)
T cd05632 157 S-----IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV----KREEVDRRVLETE---E-- 222 (285)
T ss_pred c-----ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhhhccc---c--
Confidence 1 122348999999999988899999999999999999999999997533211 0111111111000 0
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
.........+.+++.+|++.||++||+ +.++++
T Consensus 223 ------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 223 ------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 001112335567777999999999999 566654
No 210
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.3e-38 Score=313.07 Aligned_cols=251 Identities=27% Similarity=0.383 Sum_probs=196.1
Q ss_pred CCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHH---HHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 308 FSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEK---EFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
|+..+.||+|+||.||++... +++.||+|++........ ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 566789999999999999964 567999999987653332 2345999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++++|.+++... ..+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQKN----KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp TTEBHHHHHHHH----SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred cccccccccccc----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 999999999722 3489999999999999999999999 999999999999999999999999999976421111
Q ss_pred cccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
......++..|+|||... +..++.++||||+|+++|+|++|..||...... ............. .
T Consensus 154 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-----~~~~~~~~~~~~~-----~ 219 (260)
T PF00069_consen 154 ----NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-----DQLEIIEKILKRP-----L 219 (260)
T ss_dssp ----EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-----HHHHHHHHHHHTH-----H
T ss_pred ----ccccccccccccccccccccccccccccccccccccccccccccccccccch-----hhhhhhhhccccc-----c
Confidence 122344789999999988 888999999999999999999999999864110 0001110000000 0
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... .........+.+++.+||+.||++||++.++++
T Consensus 220 ~~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 220 PSSS--QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHT--TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccc--cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 000011267888888999999999999999975
No 211
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.6e-37 Score=316.35 Aligned_cols=275 Identities=25% Similarity=0.418 Sum_probs=208.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCc----EEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGC----FIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|+..+.||+|+||.||+|.. .++. .||+|.+..... ...++.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 4577788999999999999985 3443 578998875432 234688999999999999999999998754 4679
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK---DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eehhcCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccc
Confidence 999999999999987543 3488999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ .....++..|+|||++.+..++.++||||||+++||+++ |+.||..... ....++. .....
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-----~~~~~~~---~~~~~ 229 (303)
T cd05110 160 EGDEKEYN--ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-----REIPDLL---EKGER 229 (303)
T ss_pred cCcccccc--cCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHH---HCCCC
Confidence 53222111 112335678999999998899999999999999999997 8899864321 1111211 11111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC----CCCCCcccCCCCCCCC
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH----FTTDDEIMLPSNTGDP 607 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~----~~~~~~~~~~~~~~~~ 607 (618)
.. ........+.+++.+|+..+|++||+++++++.|+++.+... ...++...+|.+...+
T Consensus 230 ~~----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (303)
T cd05110 230 LP----------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSK 293 (303)
T ss_pred CC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhhheeeccCCcCCCCCCchhh
Confidence 00 011123467788889999999999999999999999875533 2334454455544443
No 212
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2e-37 Score=315.09 Aligned_cols=266 Identities=20% Similarity=0.230 Sum_probs=195.0
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|++.+.||+|++|.||+|+. .++..||+|.++... ...+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477889999999999999995 468999999986432 2346788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
++ ++|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 588888764332 24589999999999999999999999 99999999999999999999999999997654322
Q ss_pred CcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH-------HHHhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI-------TLLNT 534 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~-------~~~~~ 534 (618)
.. .....+++.|+|||.+.+ ..++.++||||||+++|||+||+.||...............+. .....
T Consensus 156 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 156 RV----YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred cc----ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchh
Confidence 11 112236889999998765 4578899999999999999999999975432111000000000 00000
Q ss_pred CCccchhcccccc---CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLL---GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......++.... .........++.+++.+||+.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000000 0000112345667888999999999999999875
No 213
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.1e-37 Score=309.32 Aligned_cols=255 Identities=21% Similarity=0.278 Sum_probs=197.5
Q ss_pred HHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 301 LMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 301 l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++.+++++.....||+|+||.||+|+. .++..|++|.+.... ...+.+.+|+.++++++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 344667777778999999999999994 567899999887543 345678999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCC--CHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-CCceEEcccCcc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHM--DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLA 455 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a 455 (618)
|+||+++++|.+++.... ..+ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.++|+|||.+
T Consensus 83 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~ 156 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW---GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTS 156 (268)
T ss_pred EEecCCCCCHHHHHHHhc---ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhh
Confidence 999999999999987543 224 7888899999999999999999 9999999999999976 678999999998
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV--ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
.......... ....++..|+|||++.+.. ++.++||||||+++|+|++|+.||....... ...+.....
T Consensus 157 ~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~-----~~~~~~~~~ 227 (268)
T cd06624 157 KRLAGINPCT----ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ-----AAMFKVGMF 227 (268)
T ss_pred eecccCCCcc----ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh-----hhHhhhhhh
Confidence 7654322111 1223788999999876543 7889999999999999999999986532210 011110000
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. .+ ..+......+.+++.+||+.+|++|||+.|+++
T Consensus 228 ~~-------~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 228 KI-------HP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cc-------CC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 00 011122345667778999999999999999875
No 214
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.9e-37 Score=305.58 Aligned_cols=247 Identities=23% Similarity=0.365 Sum_probs=197.1
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCccc
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLY 389 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 389 (618)
++||+|++|.||++...+++.|++|.+..... ..+.+.+|++++++++|+||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999977799999999876432 3567899999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccc
Q 007088 390 DKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFV 469 (618)
Q Consensus 390 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 469 (618)
+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+............
T Consensus 81 ~~l~~~~---~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~-- 152 (251)
T cd05041 81 TFLRKKK---NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD-- 152 (251)
T ss_pred HHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc--
Confidence 9986543 3478999999999999999999999 9999999999999999999999999999765422111110
Q ss_pred cCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 470 NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 470 ~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
.....+..|+|||.+.+..++.++||||||+++|||++ |..||...... ........... .
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------~~~~~~~~~~~----------~ 214 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--------QTRERIESGYR----------M 214 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--------HHHHHHhcCCC----------C
Confidence 11123567999999988899999999999999999999 88888653321 11111111100 0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.........+.+++.+|+..+|++||++.|+++.|+
T Consensus 215 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 215 PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 111223456788888999999999999999999886
No 215
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-37 Score=321.59 Aligned_cols=193 Identities=22% Similarity=0.291 Sum_probs=164.8
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
...+|.+.+.||+|+||.||+|+.. ++..||+|..... ....|+.++++++|+||+++++++...+..++||||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 3457999999999999999999964 5688999975432 235699999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+. ++|.+++.... ..+++..++.|+.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 139 ~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 139 YS-SDLYTYLTKRS---RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred cC-CcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 95 58888876543 4589999999999999999999999 99999999999999999999999999997543221
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~ 513 (618)
. .....||..|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 212 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 212 A-----FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred c-----cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 1 112348999999999999999999999999999999999666553
No 216
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.9e-37 Score=312.27 Aligned_cols=257 Identities=21% Similarity=0.317 Sum_probs=202.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|++.+.||+|+||.||++.. .+++.||+|++... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4677788999999999999995 46899999988643 23456789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++.... .+++..+..++.+++.||.|||+.. +++||||||+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 85 MDCGSLDRIYKKGG----PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred CCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 99999999886543 4899999999999999999999732 89999999999999999999999999986543221
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc---cCHHHHHHHHhcCCccc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK---GSLVEWITLLNTNSSLE 539 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~---~~l~~~~~~~~~~~~~~ 539 (618)
. ....|+..|+|||++.+..++.++|||||||++|++++|+.||......+... ..+.++........
T Consensus 159 ~------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 229 (284)
T cd06620 159 A------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP--- 229 (284)
T ss_pred c------CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc---
Confidence 1 12347899999999888889999999999999999999999998644321111 11112222111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
.+.+. .......+.+++.+|++.||++|||+.|+++..
T Consensus 230 ---~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 230 ---PPRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred ---CCCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00110 112345677888899999999999999998864
No 217
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=7.8e-38 Score=329.18 Aligned_cols=204 Identities=21% Similarity=0.292 Sum_probs=174.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|+..+.||+|+||.||++.. .+++.||+|+++.. ......+.+|+.++.+++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688899999999999999995 46899999999643 233456788999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMKKD----TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 9999999999987543 489999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCc-------------------------------ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCC
Q 007088 461 VDTH-------------------------------LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGE 509 (618)
Q Consensus 461 ~~~~-------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~ 509 (618)
.... .........||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 1100 000011245899999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 007088 510 RPTHLTN 516 (618)
Q Consensus 510 ~Pf~~~~ 516 (618)
.||....
T Consensus 234 ~Pf~~~~ 240 (360)
T cd05627 234 PPFCSET 240 (360)
T ss_pred CCCCCCC
Confidence 9997543
No 218
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.2e-37 Score=334.54 Aligned_cols=267 Identities=16% Similarity=0.174 Sum_probs=192.8
Q ss_pred HHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCC------CCccceeEEEEe
Q 007088 300 DLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH------RNLVPLLGFCVA 372 (618)
Q Consensus 300 ~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~ 372 (618)
++...+++|++.++||+|+||.||+|.. .+++.||||+++.......++..|+.++.+++| .+++++++++..
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3444678899999999999999999995 568899999997644444556677777777654 458889898876
Q ss_pred C-CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCC-----
Q 007088 373 K-KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDF----- 445 (618)
Q Consensus 373 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~----- 445 (618)
. .+.++|||++ +++|.+++.... .+++..+..|+.||+.||+|||+ . +|+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG----PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccc
Confidence 5 4788999988 678888886543 48999999999999999999997 5 899999999999998765
Q ss_pred -----------ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 007088 446 -----------EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHL 514 (618)
Q Consensus 446 -----------~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~ 514 (618)
.+||+|||.+....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~~~-------~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERHSR-------TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcccc-------ccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 49999999876432211 123489999999999999999999999999999999999999976
Q ss_pred CCCCCcccc-------CHHHHHHHH---------hcCCccchhcccc----ccC-CCC--HHHHHHHHHHHhhccCCCCC
Q 007088 515 TNAPESFKG-------SLVEWITLL---------NTNSSLETAIDKS----LLG-NGF--DGELHQFLRVACNCVLPTPK 571 (618)
Q Consensus 515 ~~~~~~~~~-------~l~~~~~~~---------~~~~~~~~~~d~~----l~~-~~~--~~~~~~l~~li~~cl~~dP~ 571 (618)
....+.... .-..|.... ..........++. +.. ... ......+.+|+.+||+.||+
T Consensus 348 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 427 (467)
T PTZ00284 348 HDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ 427 (467)
T ss_pred CChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence 442111000 000111000 0000000000000 000 000 01134577899999999999
Q ss_pred CCCCHHHHHH
Q 007088 572 ERHTMFEVYQ 581 (618)
Q Consensus 572 ~RPs~~evl~ 581 (618)
+|||++|+++
T Consensus 428 ~R~ta~e~L~ 437 (467)
T PTZ00284 428 KRLNARQMTT 437 (467)
T ss_pred hCCCHHHHhc
Confidence 9999999986
No 219
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.9e-37 Score=317.67 Aligned_cols=201 Identities=23% Similarity=0.282 Sum_probs=171.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+++. .+++.||+|++... ....+.+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688999999999999999995 46899999998642 223455889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 9999999999986532 3488999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCCCCCCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRT-----LVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
...... ....||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 155 DGTVQS---NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred CCCccc---cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 222111 11248999999998763 45788999999999999999999999753
No 220
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=7.4e-37 Score=307.50 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=198.6
Q ss_pred cCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc-------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ-------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
+|...+.||+|+||.||+|...+++.+|+|.++... .....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999998889999999886432 1124588899999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... ++++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||.+....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRFG----PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 99999999999986543 478999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCc--ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 460 PVDTH--LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 460 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
..... .........++..|+|||+..+..++.++||||||+++|+|++|+.||...+.. ............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~ 226 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-------AAMFYIGAHRGL 226 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH-------HHHHHhhhccCC
Confidence 21111 111112334788999999999888999999999999999999999999753221 111000000000
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+.+ .......+.+++.+||+.+|.+||++.|+++
T Consensus 227 -----~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 -----MPRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -----CCCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111 1122345667777999999999999999875
No 221
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.7e-36 Score=313.43 Aligned_cols=200 Identities=23% Similarity=0.329 Sum_probs=161.6
Q ss_pred CcEEeecCCeeEEEEEeC---CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeeEEEEeecCC
Q 007088 311 NNIIGTGRTGATYIAMLP---GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA--KKERLLVYSYLEN 385 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~ 385 (618)
.++||+|+||.||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.. ....++||||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 468999999999999854 46889999987643 23457789999999999999999999865 3467899999865
Q ss_pred CccccccCCCC-----CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee----CCCCceEEcccCccc
Q 007088 386 GTLYDKLHPAE-----HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL----DGDFEPKLSDFGLAR 456 (618)
Q Consensus 386 gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~a~ 456 (618)
+|.+++.... .....+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 7877764321 1123589999999999999999999999 99999999999999 456789999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
......... .......+|+.|+|||++.+ ..++.++||||+||++|||++|++||....
T Consensus 161 ~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 161 LFNSPLKPL-ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ccCCCCccc-cccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 765332111 11223458999999998876 458999999999999999999999997543
No 222
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.4e-37 Score=323.75 Aligned_cols=265 Identities=19% Similarity=0.216 Sum_probs=195.6
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC----
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK---- 374 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 374 (618)
...++|+..+.||+|+||.||++.. ..++.||+|++.... ...+.+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3457899999999999999999984 468899999997532 23456788999999999999999999886542
Q ss_pred --eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 375 --ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 375 --~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 46899999975 66666532 378899999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH-------
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL------- 525 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l------- 525 (618)
|+++....... .....||..|+|||++.+..++.++|||||||++|||++|+.||......+.....+
T Consensus 164 g~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (355)
T cd07874 164 GLARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238 (355)
T ss_pred cccccCCCccc-----cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99986543221 122347899999999999899999999999999999999999997543211100000
Q ss_pred -------HHHHHHHhc-CCccchhccc-----ccc---CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 526 -------VEWITLLNT-NSSLETAIDK-----SLL---GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 526 -------~~~~~~~~~-~~~~~~~~d~-----~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
...+..... .........+ ... ..........+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 0000000000 000 00011123466788889999999999999999863
No 223
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=6.2e-37 Score=309.73 Aligned_cols=247 Identities=26% Similarity=0.352 Sum_probs=200.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|+..+.||.|++|.||+|.. .+++.|++|.+.... .....+.+|++++++++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 3688889999999999999995 468999999986542 3345688999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++... ++++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 9999999998754 489999999999999999999999 99999999999999999999999999998775432
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ....++..|+|||++.+..++.++||||||+++|+|++|+.||...... ........ . .
T Consensus 153 ~~~----~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~~-~-----~ 214 (274)
T cd06609 153 SKR----NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--------RVLFLIPK-N-----N 214 (274)
T ss_pred ccc----ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--------HHHHHhhh-c-----C
Confidence 211 1223788899999999888999999999999999999999999753321 11111110 0 0
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+.+... .....+.+++.+||..||++||+++++++
T Consensus 215 ~~~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 215 PPSLEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CCCCccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1111111 02345677788999999999999999976
No 224
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.6e-37 Score=313.78 Aligned_cols=248 Identities=25% Similarity=0.394 Sum_probs=199.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.+|+..+.||.|++|.||+|.. .+++.|++|.+.... ...+.+.+|+++++.++||||+++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688899999999999999984 678999999986543 34567889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++++|.+++... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 99 AGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred CCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 999999988643 389999999999999999999999 999999999999999999999999999886543322
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.. ....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.. .......... ...
T Consensus 171 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--------~~~~~~~~~~-~~~--- 234 (296)
T cd06655 171 KR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIATNG-TPE--- 234 (296)
T ss_pred cC----CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcC-Ccc---
Confidence 11 1224788999999999888999999999999999999999999754321 1111111110 000
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+ .........+.+++.+||..||++||++.++++
T Consensus 235 --~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 --L--QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred --c--CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0 011122345667778999999999999999974
No 225
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.2e-37 Score=310.81 Aligned_cols=251 Identities=25% Similarity=0.408 Sum_probs=196.1
Q ss_pred cEEeecCCeeEEEEEeCC-------CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 312 NIIGTGRTGATYIAMLPG-------GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+.||+|+||.||+|+..+ +..+++|.+.... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998532 2579999886543 3456788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCC---CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-----ceEEcccCc
Q 007088 383 LENGTLYDKLHPAEH---EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-----EPKLSDFGL 454 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~DfG~ 454 (618)
+++++|.+++..... ....+++..++.++.|++.||+|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999865322 124488999999999999999999999 999999999999999877 899999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
++.......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||...... +......
T Consensus 158 ~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~ 227 (269)
T cd05044 158 ARDIYKSDYYRK--EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--------EVLQHVT 227 (269)
T ss_pred cccccccccccc--CcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--------HHHHHHh
Confidence 976543221111 112235678999999998999999999999999999998 99998643221 1111111
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
.... ..........+.+++.+||+.+|.+||+++++++.|++
T Consensus 228 ~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 AGGR----------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCc----------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1100 01112234567788889999999999999999998863
No 226
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.3e-36 Score=307.93 Aligned_cols=246 Identities=23% Similarity=0.306 Sum_probs=200.1
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.|+..+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 467788999999999999995 468899999986532 34467889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++... ++++.....++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 85 GGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 999999988643 378899999999999999999999 999999999999999999999999999976644322
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.. ....++..|+|||++.+..++.++|||||||++|||++|..||....... ......
T Consensus 157 ~~----~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~---------- 214 (277)
T cd06640 157 KR----NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--------VLFLIP---------- 214 (277)
T ss_pred cc----ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--------Hhhhhh----------
Confidence 11 12236788999999988889999999999999999999999987533211 000000
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
..............+.+++.+||+.+|++||++.++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 215 KNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred cCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 000111223455678888889999999999999999765
No 227
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.9e-37 Score=313.06 Aligned_cols=256 Identities=25% Similarity=0.360 Sum_probs=201.5
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC------
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK------ 374 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------ 374 (618)
..+++|++.+.||+|++|.||+|.. .+++.+++|++.......+++.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 3568999999999999999999996 4678999999987666667899999999999 6999999999997654
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++||||+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcc
Confidence 47999999999999998865442235689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
+.......... ....++..|+|||++.. ..++.++||||||+++|+|++|+.||...... ....
T Consensus 160 ~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~ 228 (275)
T cd06608 160 SAQLDSTLGRR----NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-------RALF 228 (275)
T ss_pred ceecccchhhh----cCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-------HHHH
Confidence 87654322211 12347889999998653 34678999999999999999999999643211 1111
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..... . .+.+. ........+.+++.+||..||++|||+.|+++
T Consensus 229 -~~~~~-~-----~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 -KIPRN-P-----PPTLK--SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -Hhhcc-C-----CCCCC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11000 0 01111 11223456778888999999999999999975
No 228
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.5e-37 Score=305.00 Aligned_cols=249 Identities=20% Similarity=0.336 Sum_probs=201.7
Q ss_pred cCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||.|+||.||.++ ..++..+++|.+... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 58889999999999999998 456889999988643 23456788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQKG--QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999876532 4589999999999999999999999 99999999999999999999999999998764433
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
.. .....+++.|+|||+..+..++.++||||||+++|||++|+.||..... .+........ ...
T Consensus 156 ~~----~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~-~~~--- 219 (256)
T cd08221 156 SM----AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--------LNLVVKIVQG-NYT--- 219 (256)
T ss_pred cc----ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcC-CCC---
Confidence 21 1223478999999999888889999999999999999999999865322 1111111111 000
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.........+.+++.+|++.+|.+||++.|+++.
T Consensus 220 ------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 220 ------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0012233456777779999999999999999875
No 229
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.6e-37 Score=319.83 Aligned_cols=201 Identities=23% Similarity=0.286 Sum_probs=165.1
Q ss_pred CCcEEeec--CCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 310 KNNIIGTG--RTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 310 ~~~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
..++||+| +|++||++.. .+|+.||+|++.... ...+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35689999 6889999984 678999999997542 23345778999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||+..........
T Consensus 82 ~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 99999999865432 3489999999999999999999999 999999999999999999999999986544322111
Q ss_pred cc---cccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 464 HL---STFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 464 ~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
.. ........++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 00 001112236778999999875 46889999999999999999999999753
No 230
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.5e-37 Score=312.13 Aligned_cols=244 Identities=25% Similarity=0.355 Sum_probs=196.6
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
|+..+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 55567899999999999985 467899999986432 334578899999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.........
T Consensus 86 ~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 86 GGSALDLLKP-----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence 9999998864 2488999999999999999999999 9999999999999999999999999999766432211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
. ....++..|+|||++.+..++.++|||||||++|||++|+.||....... ......... .+
T Consensus 158 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~~~~------~~ 219 (277)
T cd06642 158 R----NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--------VLFLIPKNS------PP 219 (277)
T ss_pred h----hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--------HHhhhhcCC------CC
Confidence 1 11237889999999998889999999999999999999999986432211 010110000 11
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+ .......+.+++.+|++.+|++||++.|+++
T Consensus 220 ~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 220 TL----EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CC----CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11 1123456778888999999999999999987
No 231
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.4e-37 Score=309.25 Aligned_cols=256 Identities=23% Similarity=0.393 Sum_probs=201.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
++|++...||+|+||.||+|+.. +...|++|.+..... ..+++.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888999999999999999953 346799998865433 3467999999999999999999999999988999
Q ss_pred EEEeecCCCccccccCCCCCC-----CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHE-----VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
+||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998765421 12589999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|++........ .......++..|+|||.+.+..++.++||||||+++|++++ |..||...... .... .
T Consensus 162 ~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-----~~~~---~ 230 (275)
T cd05046 162 SLSKDVYNSEY---YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-----EVLN---R 230 (275)
T ss_pred ccccccCcccc---cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-----HHHH---H
Confidence 99875432211 11122235778999999888888999999999999999999 78888643221 1111 1
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.. ..... ..........+.+++.+||+.+|++||++.|+++.|.
T Consensus 231 ~~-~~~~~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQ-AGKLE--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HH-cCCcC--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11 00000 0011123346777888999999999999999999875
No 232
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.2e-37 Score=305.55 Aligned_cols=248 Identities=19% Similarity=0.261 Sum_probs=197.6
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC-CeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-KERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e 381 (618)
+|++.+.||+|++|.||++.. .+++.|++|.+.... ...+.+.+|++++++++|+|++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 478899999999999999995 457899999986532 3345688999999999999999999987644 46789999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQKG--KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 9999999999875432 4589999999999999999999999 9999999999999999999999999999866432
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
... .....+++.|+|||+..+..++.++||||||+++|+|++|+.||...+. ......... ...
T Consensus 156 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--------~~~~~~~~~-~~~--- 219 (257)
T cd08223 156 CDM----ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM--------NSLVYRIIE-GKL--- 219 (257)
T ss_pred CCc----cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHh-cCC---
Confidence 221 1123478899999999999999999999999999999999999864321 111111111 110
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..........+.+++.+|++.||++||++.|+++
T Consensus 220 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 220 ------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0111223456778888999999999999999975
No 233
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.8e-37 Score=309.20 Aligned_cols=251 Identities=21% Similarity=0.275 Sum_probs=196.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
++|.+.+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4677788999999999999984 568999999987543 23456788999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++++|.+++.... .+++.+++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 89 ~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 89 GGGSLQDIYHVTG----PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred CCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 9999999886543 489999999999999999999999 999999999999999999999999999876543221
Q ss_pred cccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
. .....|+..|+|||++. ...++.++|||||||++|||++|+.||....... ... ...... .
T Consensus 162 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~----~~~----~~~~~~-~-- 226 (267)
T cd06645 162 K----RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----ALF----LMTKSN-F-- 226 (267)
T ss_pred c----cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh----hHH----hhhccC-C--
Confidence 1 11234889999999874 4568899999999999999999999986533211 000 000000 0
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+.... .......+.+++.+|++.+|++||+++++++
T Consensus 227 -~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 227 -QPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -CCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0000000 0011235667788999999999999999875
No 234
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=7e-37 Score=305.74 Aligned_cols=247 Identities=24% Similarity=0.371 Sum_probs=197.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|++.+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++|||++++++++... ..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 4688899999999999999975 67789999986543 346788999999999999999999998664 47999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
++|.+++..... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~-- 155 (254)
T cd05083 83 GNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD-- 155 (254)
T ss_pred CCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccCC--
Confidence 999999875432 4588999999999999999999999 999999999999999999999999999875432111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
....+..|+|||++.+..++.++||||||+++|||++ |+.||..... .+.........
T Consensus 156 -----~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~-------- 214 (254)
T cd05083 156 -----NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--------KEVKECVEKGY-------- 214 (254)
T ss_pred -----CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--------HHHHHHHhCCC--------
Confidence 1124567999999988889999999999999999998 9999865322 11111111110
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
...........+.+++.+|++.+|++||+++++++.|++
T Consensus 215 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 215 --RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 001112233566788889999999999999999998864
No 235
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.8e-36 Score=308.11 Aligned_cols=265 Identities=23% Similarity=0.296 Sum_probs=198.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|+..+.||+|++|.||+|... +++.||+|++.... ...+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999965 68999999986432 234567899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++++|..++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKNPR----GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999988887765432 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc-------CHHHHHHHHh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG-------SLVEWITLLN 533 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~-------~l~~~~~~~~ 533 (618)
.... ....++..|+|||++.+ ..++.++||||||+++|||++|+.||......+.... ....+.....
T Consensus 154 ~~~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 154 GDDY----TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred cccc----cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc
Confidence 2211 12236788999998765 5578999999999999999999999975432111000 0000000000
Q ss_pred cCCccchhccccccCCC-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLLGNG-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..........+...... .......+.+++.+|++.||++||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000000000000000 0112356778888999999999999999875
No 236
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.3e-36 Score=304.73 Aligned_cols=254 Identities=26% Similarity=0.358 Sum_probs=189.6
Q ss_pred cEEeecCCeeEEEEEeCC---CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 312 NIIGTGRTGATYIAMLPG---GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
+.||+|+||.||+|...+ +..+++|.++... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998543 4679999887543 23356889999999999999999999999988999999999999
Q ss_pred ccccccCCCCC-CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 387 TLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 387 sL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
+|.+++..... .....++..+..++.|++.|++|||+. +++||||||+||+++.++++||+|||.++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~- 156 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY- 156 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCccee-
Confidence 99999865432 223567888889999999999999999 9999999999999999999999999998754332211
Q ss_pred cccccCCCCcccccCCCCCCCC-------CCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTL-------VATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
.......++..|+|||++.+. .++.++||||||+++|||++ |+.||......+ .... .. ...
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-----~~~~---~~-~~~ 226 (269)
T cd05087 157 -VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ-----VLTY---TV-REQ 226 (269)
T ss_pred -ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH-----HHHH---Hh-hcc
Confidence 111223467889999987542 35789999999999999996 999996543211 0000 00 001
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.....++.+.. .....+.+++.+|+ .+|++|||++||++.|+
T Consensus 227 ~~~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QLKLPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11111111111 12234566777998 68999999999998874
No 237
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.7e-36 Score=303.54 Aligned_cols=238 Identities=24% Similarity=0.363 Sum_probs=189.7
Q ss_pred cEEeecCCeeEEEEEeCCC-----------cEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 312 NIIGTGRTGATYIAMLPGG-----------CFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~-----------~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
+.||+|+||.||+|...+. ..|++|.+.........+.+|+.++++++||||+++++++.. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 4689999999999996543 358888876654446789999999999999999999999988 7789999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-------ceEEcccC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-------EPKLSDFG 453 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-------~~kl~DfG 453 (618)
||+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 80 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 80 EYVKFGPLDVFLHREK---NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EcCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 9999999999987654 2589999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCC--CCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHH
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL--VATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWIT 530 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~ 530 (618)
++....... ...++..|+|||++.+. .++.++||||||+++|||++ |..||...... .+..
T Consensus 154 ~a~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--------~~~~ 217 (259)
T cd05037 154 IPITVLSRE--------ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--------EKER 217 (259)
T ss_pred ccccccccc--------ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--------hHHH
Confidence 998654311 12256789999998776 78999999999999999999 57777653211 1111
Q ss_pred HHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 531 LLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 531 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
....... .. ......+.+++.+|+..+|.+||++.|+++.|+
T Consensus 218 ~~~~~~~--------~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 218 FYQDQHR--------LP----MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHhcCCC--------CC----CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111000 00 001156778888999999999999999998763
No 238
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.3e-37 Score=322.86 Aligned_cols=198 Identities=23% Similarity=0.299 Sum_probs=168.0
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK------ 373 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 373 (618)
..++|...+.||+|+||.||++.. ..++.||||++... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999994 46889999999653 23345678999999999999999999987543
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
...++||||+++ +|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999975 67766632 378899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
+++....... .....+|..|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 172 ~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 229 (364)
T cd07875 172 LARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229 (364)
T ss_pred CccccCCCCc-----ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence 9986543221 122347899999999999999999999999999999999999997543
No 239
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=9.2e-37 Score=309.88 Aligned_cols=248 Identities=23% Similarity=0.304 Sum_probs=194.1
Q ss_pred CCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 308 FSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
|++.+.||+|+||.||++... ++..+++|.+.... ...+.+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999954 57889999986533 3456788999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
++|..++.... .++++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 87 ~~l~~~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~- 159 (282)
T cd06643 87 GAVDAVMLELE---RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR- 159 (282)
T ss_pred CcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccc-
Confidence 99988876433 3589999999999999999999999 9999999999999999999999999998765332111
Q ss_pred cccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 466 STFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.....++..|+|||++. +..++.++|||||||++|||++|+.||...... +...........
T Consensus 160 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~~-- 226 (282)
T cd06643 160 ---RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEPP-- 226 (282)
T ss_pred ---cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--------HHHHHHhhcCCC--
Confidence 12234789999999873 455788999999999999999999998753321 111111111000
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+. ........+.+++.+||+.||.+||++.++++
T Consensus 227 ----~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 227 ----TLA--QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ----CCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 01112345677778999999999999998864
No 240
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.3e-36 Score=305.51 Aligned_cols=238 Identities=23% Similarity=0.352 Sum_probs=185.7
Q ss_pred cEEeecCCeeEEEEEeCC-------------CcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 312 NIIGTGRTGATYIAMLPG-------------GCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
+.||+|+||.||+|+..+ ...|++|.+.... .....+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998432 2368999886543 23456888999999999999999999999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc-------eEEc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE-------PKLS 450 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-------~kl~ 450 (618)
+||||+++|+|..++.... ..+++..++.++.||++||+|||+. +|+||||||+|||++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS---DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 9999999999988876543 3589999999999999999999999 9999999999999987664 8999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHHHH-hCCCCCCCCCCCCccccCHHHH
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELI-TGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~Gvil~ell-tG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
|||++....... ...++..|+|||.+. +..++.++|||||||++|||+ +|+.||...... +.
T Consensus 155 d~g~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--------~~ 218 (262)
T cd05077 155 DPGIPITVLSRQ--------ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA--------EK 218 (262)
T ss_pred CCCCCccccCcc--------cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh--------HH
Confidence 999987553221 123678899999876 567899999999999999998 588887643211 11
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
........ .. .......+.+++.+||+.||.+||++.+|++.+
T Consensus 219 ~~~~~~~~--------~~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 219 ERFYEGQC--------ML----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHhcCc--------cC----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11100000 00 111234577888899999999999999998875
No 241
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.9e-36 Score=303.72 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=201.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
++|+..+.||+|++|.||+|.. .+++.+++|.+.... ...+.+.+|++++++++||||+++++++.+.+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 5788899999999999999995 467899999987543 34567899999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||.+........
T Consensus 83 ~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 83 GGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred CCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 9999999887642 3589999999999999999999999 999999999999999999999999999876543221
Q ss_pred cccccccCCCCcccccCCCCCCCC---CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTL---VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.. ....++..|+|||.+.+. .++.++||||||+++|||++|+.||....... . ....... ..
T Consensus 157 ~~----~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-------~-~~~~~~~-~~-- 221 (262)
T cd06613 157 KR----KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR-------A-LFLISKS-NF-- 221 (262)
T ss_pred cc----ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-------H-HHHHHhc-cC--
Confidence 11 122378889999998776 88999999999999999999999997533211 0 0000000 00
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....+ .........+.+++.+|+..+|.+|||+.+++.
T Consensus 222 -~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 222 -PPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -CCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 111234456788888999999999999999875
No 242
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.7e-37 Score=344.96 Aligned_cols=262 Identities=19% Similarity=0.332 Sum_probs=199.7
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--Ce
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KE 375 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 375 (618)
....++|.+.+.||+|+||.||++.. .++..||+|.+.... .....+..|+.++++++||||++++++|... ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 34457899999999999999999995 457889999986532 3345688999999999999999999988653 46
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC----CCceecCCCCCCeeeCC--------
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN----PRIIHRNISSKCILLDG-------- 443 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~ivH~Dlkp~NIll~~-------- 443 (618)
.|+||||+++|+|.++|.........+++..++.|+.||+.||+|||+... .+|+||||||+|||++.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 899999999999999987543323469999999999999999999998521 25999999999999964
Q ss_pred ---------CCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCC
Q 007088 444 ---------DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPT 512 (618)
Q Consensus 444 ---------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf 512 (618)
.+.+||+|||++......... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~-----~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF 243 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESMA-----HSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccccc-----cccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 335899999999866432211 12348999999998754 45889999999999999999999999
Q ss_pred CCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHh
Q 007088 513 HLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ--LLRAI 586 (618)
Q Consensus 513 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 586 (618)
..... ............ .+.. ......+.+|+..||+.+|.+||++.|++. .+..+
T Consensus 244 ~~~~~-------~~qli~~lk~~p--------~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 244 HKANN-------FSQLISELKRGP--------DLPI---KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CcCCc-------HHHHHHHHhcCC--------CCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 75322 122222211111 1111 112345777888999999999999999984 44443
No 243
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=305.37 Aligned_cols=247 Identities=22% Similarity=0.326 Sum_probs=206.0
Q ss_pred CCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 308 FSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
|++.++||+|+||.||+|. ...|..+|||.+..+ .+.+++.+|+.++++++.|++|++||.|..+...|+|||||..|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 6667899999999999999 467999999998654 45678899999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
+..+.++.+. .++++.++..+++..++||+|||.. .-+|||||+.|||++.+|.+||+|||.|..+.+.-..
T Consensus 114 SiSDI~R~R~---K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK-- 185 (502)
T KOG0574|consen 114 SISDIMRARR---KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK-- 185 (502)
T ss_pred cHHHHHHHhc---CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHh--
Confidence 9999997665 5799999999999999999999999 8999999999999999999999999999876543222
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccc
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSL 546 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 546 (618)
.+...||+.|||||++..-.|..++||||+|++..||.-|++||.+..+-.....+ ... +..
T Consensus 186 --RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI--------------PT~--PPP 247 (502)
T KOG0574|consen 186 --RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI--------------PTK--PPP 247 (502)
T ss_pred --hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec--------------cCC--CCC
Confidence 23345999999999999999999999999999999999999999764432111100 000 111
Q ss_pred cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 547 LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....+.....++.+++++||-..|++|-|+.++++
T Consensus 248 TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 248 TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 11224455667888888999999999999988764
No 244
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.5e-36 Score=309.97 Aligned_cols=250 Identities=21% Similarity=0.278 Sum_probs=196.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
+.|++.+.||+|+||.||+|... ++..|++|.+.... ...+.+.+|+.++++++|+||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56888999999999999999964 58999999987543 34567889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++++|..++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 92 ~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 92 PGGAVDAIMLELD---RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred CCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 9999988775433 3489999999999999999999999 999999999999999999999999999875432211
Q ss_pred cccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
.. ....++..|+|||++. ...++.++|||||||++|||++|+.||...... ...........
T Consensus 166 ~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~- 232 (292)
T cd06644 166 RR----DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEP- 232 (292)
T ss_pred cc----ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--------HHHHHHhcCCC-
Confidence 11 1223788999999874 345688999999999999999999998653211 11111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.. ........++.+++.+||+.||++||++.|+++
T Consensus 233 -----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 -----PTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -----ccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 001122345777888999999999999999965
No 245
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=7.1e-37 Score=308.33 Aligned_cols=253 Identities=21% Similarity=0.358 Sum_probs=198.1
Q ss_pred cCCCCcEEeecCCeeEEEEEeCC--CcEEEEEEeccC-----------ccCHHHHHHHHHHHhc-CCCCCccceeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPG--GCFIMIKRLEDS-----------QHSEKEFLSEINTLGS-VRHRNLVPLLGFCVA 372 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~-----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 372 (618)
+|++.+.||+|+||.||++.... ++.+|+|.+... .....++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999654 788999987532 1223457788888865 799999999999999
Q ss_pred CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCCceEEcc
Q 007088 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSD 451 (618)
Q Consensus 373 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~D 451 (618)
.+..++||||+++++|.+++.........+++..++.++.|++.||.|||+ . +++|+||||+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 999999999999999998875432223568999999999999999999996 5 899999999999999999999999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
||.+........ .....++..|+|||...+..++.++||||||+++|||++|+.||..... ......
T Consensus 158 fg~~~~~~~~~~-----~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--------~~~~~~ 224 (269)
T cd08528 158 FGLAKQKQPESK-----LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--------LSLATK 224 (269)
T ss_pred ccceeecccccc-----cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--------HHHHHH
Confidence 999987554321 1223478899999999988899999999999999999999999864321 111111
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
..... .. + ... ......+.+++.+|++.||++||++.|+.++++
T Consensus 225 ~~~~~-~~----~-~~~---~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 225 IVEAV-YE----P-LPE---GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred Hhhcc-CC----c-CCc---ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11110 00 0 000 112345677778999999999999999998875
No 246
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.2e-36 Score=314.41 Aligned_cols=254 Identities=23% Similarity=0.283 Sum_probs=199.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCcc----CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQH----SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|+..+.||+|++|.||++... +++.||+|.+..... ..+.+..|++++++++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999964 589999999975432 3456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+.+++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQPG--KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhCCC--CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 99999999999875432 4589999999999999999999999 999999999999999999999999999876533
Q ss_pred CCCccc-------------------------ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 461 VDTHLS-------------------------TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 461 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
...... .......|+..|+|||+..+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 211100 0111234788999999999888999999999999999999999999754
Q ss_pred CCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 007088 516 NAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT----MFEVYQ 581 (618)
Q Consensus 516 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 581 (618)
+... .+.... +..............+.+++.+|++.||++||+ ++|+++
T Consensus 236 ~~~~-------~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 236 NRDE-------TFSNIL----------KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred chHH-------HHHHHh----------cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 3211 111111 111111111113456778888999999999999 655554
No 247
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-36 Score=308.17 Aligned_cols=260 Identities=22% Similarity=0.265 Sum_probs=200.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 380 (618)
++|+..+.||.|++|.||++.. .+++.+|+|.+.... ....++.+|++++++++||||+++++++.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 3678889999999999999996 468999999987543 2456789999999999999999999998654 3679999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999888754332335588999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... ...++..|+|||.+.+..++.++||||+|+++|+|++|+.||...............+... .. ...
T Consensus 158 ~~~~------~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~-~~~ 227 (287)
T cd06621 158 SLAG------TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN---MP-NPE 227 (287)
T ss_pred cccc------cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc---CC-chh
Confidence 2211 1236788999999988899999999999999999999999998653211111112222111 10 000
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+..... ........+.+++.+|++.+|.+|||+.|+++
T Consensus 228 -~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 228 -LKDEPG--NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred -hccCCC--CCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 000000 00113456778888999999999999999986
No 248
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.2e-36 Score=305.39 Aligned_cols=250 Identities=21% Similarity=0.317 Sum_probs=199.7
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeeEEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVA--KKERLLVY 380 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~ 380 (618)
+|++.+.||.|+||.||++.. .++..|++|++.... ...+.+.+|++++++++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999984 578899999986533 234568889999999999999999998764 34578999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH-----HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
||+++++|.+++.........+++..++.++.|++.||+||| +. +++|+||||+||+++.++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999998764333456899999999999999999999 66 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.......... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ........ .
T Consensus 158 ~~~~~~~~~~----~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~-~ 224 (265)
T cd08217 158 KILGHDSSFA----KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--------LQLASKIK-E 224 (265)
T ss_pred ccccCCcccc----cccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--------HHHHHHHh-c
Confidence 8765433211 123478899999999988899999999999999999999999975431 11111111 1
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... ..........+.+++.+|++.+|++||++.+|++
T Consensus 225 ~~~---------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 225 GKF---------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CCC---------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 110 1112233456778888999999999999999986
No 249
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.8e-36 Score=316.73 Aligned_cols=259 Identities=19% Similarity=0.262 Sum_probs=193.5
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC-----
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK----- 373 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 373 (618)
...++|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3467899999999999999999994 578899999987532 2345677899999999999999999987543
Q ss_pred -CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 374 -KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 374 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
...++++|++ +++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3468999988 6799887753 2489999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|+++...... ....||..|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+..+...
T Consensus 163 g~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~ 231 (343)
T cd07878 163 GLARQADDEM-------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID----QLKRIMEV 231 (343)
T ss_pred ccceecCCCc-------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHH
Confidence 9998654321 12347899999998876 568899999999999999999999997543211 11111110
Q ss_pred HhcC----------Cccchhcc--ccccCC----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 532 LNTN----------SSLETAID--KSLLGN----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 532 ~~~~----------~~~~~~~d--~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ......+. +..... ........+.+++.+|++.||.+|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 00000000 000000 00011234678888999999999999999985
No 250
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.6e-37 Score=308.83 Aligned_cols=237 Identities=23% Similarity=0.335 Sum_probs=184.5
Q ss_pred EEeecCCeeEEEEEeCC-------------------------CcEEEEEEeccCcc-CHHHHHHHHHHHhcCCCCCccce
Q 007088 313 IIGTGRTGATYIAMLPG-------------------------GCFIMIKRLEDSQH-SEKEFLSEINTLGSVRHRNLVPL 366 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l 366 (618)
.||+|+||.||+|.... ...|++|++..... ....+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 14589998865432 34568889999999999999999
Q ss_pred eEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-
Q 007088 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF- 445 (618)
Q Consensus 367 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 445 (618)
++++.+....++||||+++|+|..++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK---GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 999999999999999999999999886533 3588999999999999999999999 999999999999997643
Q ss_pred ------ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHH-hCCCCCCCCCC
Q 007088 446 ------EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELI-TGERPTHLTNA 517 (618)
Q Consensus 446 ------~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~ell-tG~~Pf~~~~~ 517 (618)
.+|++|||.+....... ...++..|+|||.+.+ ..++.++||||||+++||++ +|+.||.....
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~~--------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSRE--------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred ccCccceeeecCCcccccccccc--------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 37999999886432211 1236788999998865 56899999999999999995 69999865432
Q ss_pred CCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 518 PESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
.+ ...... .... .. ......+.+++.+||+.+|++||++.++++.|
T Consensus 228 ~~-----~~~~~~---~~~~--------~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 SE-----KERFYE---KKHR--------LP----EPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HH-----HHHHHH---hccC--------CC----CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 11 111111 0000 00 11123577888899999999999999999877
No 251
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.1e-36 Score=304.43 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=196.9
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc----------CHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH----------SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
+|.+.+.||+|++|.||+|.. .+++.||+|.+..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477788999999999999985 4688999998864321 12457889999999999999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG----AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 999999999999999996543 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcc--cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 456 RLMNPVDTHL--STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 456 ~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
+......... ........|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... .. .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~-~~~~~ 225 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-------QA-IFKIG 225 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-------HH-HHHHh
Confidence 8765321111 00111223788999999998888999999999999999999999999753211 11 00000
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ...+.+ .......+.+++.+||+.||.+||++.|+++
T Consensus 226 ~------~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 226 E------NASPEI----PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c------cCCCcC----CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0 001111 1123345667777999999999999999975
No 252
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.6e-36 Score=305.50 Aligned_cols=254 Identities=21% Similarity=0.339 Sum_probs=200.0
Q ss_pred cCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc-------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ-------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
+|+..+.||+|++|.||++. ..+++.||+|.+.... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47888999999999999998 4678999999986432 124568899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-ceEEcccCcccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-EPKLSDFGLARL 457 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~a~~ 457 (618)
||||+++++|.+++.... ++++..+..++.|++.||.|||+. +++|+||||+||+++.++ .++|+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 999999999999986543 488999999999999999999999 999999999999998776 599999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
................++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... . ...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----~-~~~~~~~~~~~- 227 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN----H-LALIFKIASAT- 227 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc----h-HHHHHHHhccC-
Confidence 65432211111122347889999999988889999999999999999999999996433211 1 11111100000
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
............+.+++.+|+..+|.+||++.|+++
T Consensus 228 --------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 228 --------TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --------CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 001112234456778888999999999999999974
No 253
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.4e-37 Score=305.04 Aligned_cols=248 Identities=23% Similarity=0.303 Sum_probs=200.2
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|++.+.||+|+||.||++.. .+++.|++|++... ....+++.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 488899999999999999994 56899999998643 23345789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++..... ..+++.+++.++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 999999998865432 3578999999999999999999999 99999999999999999999999999997654422
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ....|+..|+|||+..+..++.++|||||||++++|++|+.||..... .+.+........
T Consensus 156 ~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~~----- 218 (256)
T cd08218 156 ELA----RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--------KNLVLKIIRGSY----- 218 (256)
T ss_pred hhh----hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--------HHHHHHHhcCCC-----
Confidence 211 122378889999999888899999999999999999999999864321 122211111110
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..........+.+++.+|++.+|.+||++.||++
T Consensus 219 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 219 -----PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -----CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0011223446777888999999999999999986
No 254
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.1e-36 Score=302.36 Aligned_cols=250 Identities=28% Similarity=0.464 Sum_probs=199.9
Q ss_pred CCCCcEEeecCCeeEEEEEeCC-----CcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 308 FSKNNIIGTGRTGATYIAMLPG-----GCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
+++.+.||+|+||.||++...+ +..||+|.+..... ..+.+.+|++.+.+++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999643 48899999976543 4678999999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 99999999999876442 2289999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
....... ...++..|+|||...+..++.++||||+|+++|||++ |+.||..... .............
T Consensus 156 ~~~~~~~---~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~- 223 (258)
T smart00219 156 DDYYKKK---GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKGYRL- 223 (258)
T ss_pred ccccccc---cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCC-
Confidence 3222111 1226789999999988889999999999999999998 7888764221 1111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
.........+.+++.+|+..||++|||+.|+++.|
T Consensus 224 ---------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 ---------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 01112345677788899999999999999998764
No 255
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.8e-36 Score=311.63 Aligned_cols=200 Identities=23% Similarity=0.335 Sum_probs=161.1
Q ss_pred CcEEeecCCeeEEEEEeC---CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeeEEEEeecCC
Q 007088 311 NNIIGTGRTGATYIAMLP---GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA--KKERLLVYSYLEN 385 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~ 385 (618)
..+||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 468999999999999954 45789999987643 23467899999999999999999999854 4567899999875
Q ss_pred CccccccCCCC-----CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee----CCCCceEEcccCccc
Q 007088 386 GTLYDKLHPAE-----HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL----DGDFEPKLSDFGLAR 456 (618)
Q Consensus 386 gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~a~ 456 (618)
+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 7777664221 1224588999999999999999999999 99999999999999 566789999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
......... .......+|+.|+|||++.+ ..++.++|||||||++|||+||++||....
T Consensus 161 ~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 161 LFNSPLKPL-ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ccCCCcccc-cccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 765432211 11123347899999998876 457899999999999999999999997543
No 256
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.6e-36 Score=315.57 Aligned_cols=254 Identities=19% Similarity=0.188 Sum_probs=192.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.++||+|+||.||++... +++.||+|++.+.. .....+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999954 57889999986422 23345788999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 9999999999997533 3489999999999999999999999 999999999999999999999999999876533
Q ss_pred CCCcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...+. .+........
T Consensus 155 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~--------~~~~~~i~~~ 223 (332)
T cd05623 155 DGTVQ---SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNH 223 (332)
T ss_pred CCcce---ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH--------HHHHHHHhCC
Confidence 22211 11234899999999875 34678999999999999999999999975332 1222222111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCC--CCCCCCHHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPT--PKERHTMFEVYQL 582 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~evl~~ 582 (618)
..... +. .........+.+++.+|+..+ +..|++++|+++.
T Consensus 224 ~~~~~-~p-----~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 224 KERFQ-FP-----AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred Ccccc-CC-----CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 10000 00 001112334555666777554 4447899998765
No 257
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.4e-37 Score=318.94 Aligned_cols=253 Identities=19% Similarity=0.208 Sum_probs=193.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|.+.+.||+|+||.||+++. .+++.||+|++.... .....+.+|..++..++|+||+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4788999999999999999995 467899999986522 23345788999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKFE---DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999997533 3488999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRT-----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
...... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .+........
T Consensus 155 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--------~~~~~~i~~~ 223 (331)
T cd05624 155 DGTVQS---SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNH 223 (331)
T ss_pred CCceee---ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH--------HHHHHHHHcC
Confidence 322111 12348999999998765 4678899999999999999999999975332 1111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKE--RHTMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 581 (618)
..... +. .........+.+++.+|+..++++ |++++++++
T Consensus 224 ~~~~~-~p-----~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 224 EERFQ-FP-----SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred CCccc-CC-----CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 10000 00 011112345566666888765544 468888864
No 258
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-36 Score=308.49 Aligned_cols=252 Identities=19% Similarity=0.314 Sum_probs=196.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|++.+.||+|+||.||++... ++..||+|.++... .....+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999964 78999999886532 2345788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++..... ...+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 81 MDAGSLDKLYAGGVA-TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred cCCCCHHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 999999988865421 235899999999999999999999632 89999999999999999999999999987654322
Q ss_pred CcccccccCCCCcccccCCCCCCCC------CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTL------VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
. ....++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ............
T Consensus 158 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~- 225 (286)
T cd06622 158 A------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQLSAIVDG- 225 (286)
T ss_pred c------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHHHHHHHhhc-
Confidence 1 122377899999987554 3488999999999999999999999653221 111111111000
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .+ .........+.+++.+|++.+|++||+++++++
T Consensus 226 ~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 226 D-----PP----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred C-----CC----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 0 00 111224456677888999999999999999986
No 259
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.7e-36 Score=304.11 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=186.8
Q ss_pred EEeecCCeeEEEEEeCCC---cEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCc
Q 007088 313 IIGTGRTGATYIAMLPGG---CFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGT 387 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 387 (618)
.||+|+||.||++...++ ..+++|.+.... ...+.+.+|+.+++.++||||+++++.+.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999984333 356677765432 345679999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccc
Q 007088 388 LYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467 (618)
Q Consensus 388 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 467 (618)
|.+++..........++..+..++.||++||+|||+. +++||||||+|||++.++.++|+|||++........ ..
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~--~~ 156 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY--IE 156 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchh--hh
Confidence 9999976543334567788889999999999999999 999999999999999999999999999864322111 01
Q ss_pred cccCCCCcccccCCCCCCC-------CCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 468 FVNGEFGDLGYVAPEYPRT-------LVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 468 ~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
......++..|+|||+... ..++.++||||||+++|||++ |..||..... .+........ ...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------~~~~~~~~~~-~~~ 227 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--------REVLNHVIKD-QQV 227 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHhh-ccc
Confidence 1122347889999998743 345789999999999999997 5667754322 1111111111 111
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
...++.+... ....+.+++..|+ .+|++||+++||++.|.
T Consensus 228 ~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 228 KLFKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccCCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2222222211 2234556667899 67999999999998873
No 260
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=320.78 Aligned_cols=243 Identities=23% Similarity=0.326 Sum_probs=197.0
Q ss_pred EEeecCCeeEEEEE-eCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcccc
Q 007088 313 IIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYD 390 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 390 (618)
+||+|.||+||.|+ ..+...+|||-+.... ...+-+..|+.+.++++|.|||+++|.+.++++.-+.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 69999999999999 4567789999986533 344557889999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcCC--CHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC-CCCceEEcccCcccccCCCCCcccc
Q 007088 391 KLHPAEHEVMHM--DWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLST 467 (618)
Q Consensus 391 ~l~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~ 467 (618)
++...- .++ .+.++-.+.+||++||.|||+. .|||||||-+|||++ -.|.+||+|||.++.+..-.....+
T Consensus 662 LLrskW---GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 662 LLRSKW---GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred HHHhcc---CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence 997654 345 7788889999999999999999 999999999999996 5789999999999987654433333
Q ss_pred cccCCCCcccccCCCCCCCC--CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 468 FVNGEFGDLGYVAPEYPRTL--VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 468 ~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
+ .||..|||||++..+ .|+.++|||||||++.||.||++||.....++.. ..+ -+ .-.
T Consensus 736 F----TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA------MFk----VG------myK 795 (1226)
T KOG4279|consen 736 F----TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA------MFK----VG------MYK 795 (1226)
T ss_pred c----ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh------hhh----hc------cee
Confidence 2 399999999998764 5889999999999999999999999865543210 000 00 000
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.....+.+...+...++.+|+.+||.+||+++++++
T Consensus 796 vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 796 VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 112234556667778888999999999999999975
No 261
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.4e-36 Score=301.39 Aligned_cols=253 Identities=26% Similarity=0.360 Sum_probs=200.1
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||+|++|.||++.. .+++.|++|.++.... ..+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 578889999999999999995 4789999999876543 456789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEHGR----ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhhcC----CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 99999999987543 378899999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccCCCCcccccCCCCCCCCC---CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLV---ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...........++..|+|||++.+.. ++.++||||||+++||+++|+.||...... ......... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-------~~~~~~~~~-~~-- 223 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-------FQIMFHVGA-GH-- 223 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-------HHHHHHHhc-CC--
Confidence 32222122334788999999988766 889999999999999999999999753211 011100000 00
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+.+.. .......+.+++.+|++.+|.+||++.|++.
T Consensus 224 ---~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 ---KPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---CCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 001100 1112345667778999999999999999864
No 262
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1e-36 Score=309.13 Aligned_cols=251 Identities=23% Similarity=0.324 Sum_probs=198.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|++|.||++.. .++..||+|++.... ...+.+.+|++++++++|+||+++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 45688899999999999999996 468999999986543 3445788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++.... ..+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 84 CDGGALDSIMLELE---RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred cCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 99999999986543 3589999999999999999999999 99999999999999999999999999987654322
Q ss_pred CcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
... ....++..|+|||.+. +..++.++||||||+++|||++|+.||...... +..........
T Consensus 158 ~~~----~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~ 225 (280)
T cd06611 158 QKR----DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--------RVLLKILKSEP 225 (280)
T ss_pred ccc----ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--------HHHHHHhcCCC
Confidence 211 1223788999999864 345778999999999999999999999753221 11111111100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+ .........+.+++.+||+.+|.+||++.++++
T Consensus 226 ------~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 226 ------PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ------CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 000 001112345667777999999999999999976
No 263
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6.4e-37 Score=311.26 Aligned_cols=263 Identities=22% Similarity=0.275 Sum_probs=193.4
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||+|++|.||+|+. .+|+.|++|+++... .....+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 478889999999999999995 468999999986432 2235678899999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++ +|.+++.... ..+++..++.++.||++||.|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CDQ-DLKKYFDSCN---GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CCC-CHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 974 7877775433 3489999999999999999999999 99999999999999999999999999998654322
Q ss_pred CcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH---------HHHHHHH
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL---------VEWITLL 532 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l---------~~~~~~~ 532 (618)
.. .....++..|+|||++.+. .++.++|||||||++|||++|..|+......+.....+ ..|....
T Consensus 154 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 154 RC----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred CC----cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhh
Confidence 11 1123468899999987664 46899999999999999999999975433211000000 0010000
Q ss_pred hcCCccch--hcccccc-CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTNSSLET--AIDKSLL-GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~~~~~~--~~d~~l~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....... ....... ..........+.+++.+||+.||.+|||++|+++
T Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 230 -KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred -hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000000 0000000 0001112345667788999999999999999975
No 264
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.4e-36 Score=302.96 Aligned_cols=250 Identities=20% Similarity=0.309 Sum_probs=192.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc------cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--Cee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 376 (618)
.+|+..+.||+|+||.||+|.. .++..|++|++.... ...+.+.+|+.++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688899999999999999995 468999999885421 1234578899999999999999999998763 567
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++++||+++++|.+++.... .+++...+.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG----ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 89999999999999986543 388999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
.......... ......++..|+|||.+.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~--------~~~~~~~~~~ 225 (266)
T cd06651 155 RLQTICMSGT-GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM--------AAIFKIATQP 225 (266)
T ss_pred ccccccccCC-ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH--------HHHHHHhcCC
Confidence 6543211111 111233788999999999888999999999999999999999999753211 1111111100
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .+.+ .......+..++ +|+..+|++||+++|+++
T Consensus 226 ~-----~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 T-----NPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred C-----CCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0 1111 111223344444 688899999999999975
No 265
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.1e-36 Score=304.94 Aligned_cols=253 Identities=25% Similarity=0.346 Sum_probs=186.5
Q ss_pred EEeecCCeeEEEEEeCC---CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCc
Q 007088 313 IIGTGRTGATYIAMLPG---GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGT 387 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 387 (618)
.||+|+||.||+|...+ ...+++|.+.... .....+.+|+..++.++|+||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997433 3578889876433 234568899999999999999999999999999999999999999
Q ss_pred cccccCCCCCC-CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 388 LYDKLHPAEHE-VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 388 L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
|.+++...... ....++.....++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99998765431 23356788899999999999999999 999999999999999999999999999875433221111
Q ss_pred ccccCCCCcccccCCCCCC-------CCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 467 TFVNGEFGDLGYVAPEYPR-------TLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
.....++..|+|||+.. ...++.++|||||||++|||++ |..||......+ .+.. ..... .
T Consensus 159 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~~~~----~~~~~-~ 227 (269)
T cd05042 159 --KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ----VLKQ----VVREQ-D 227 (269)
T ss_pred --cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH----HHHH----Hhhcc-C
Confidence 11223567899999754 3456889999999999999999 788886432210 1111 11111 0
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
....++.+. ......+.+++..|+ .||++|||++||++.|.
T Consensus 228 ~~~~~~~~~----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 228 IKLPKPQLD----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccCCCCccc----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111111111 122234455666888 59999999999999873
No 266
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.3e-36 Score=308.33 Aligned_cols=260 Identities=22% Similarity=0.274 Sum_probs=197.2
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc------CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH------SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
+|+..+.||+|++|.||+|.. .+++.|++|.+..... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477888999999999999995 4689999999975432 234567899999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+ +|+|.+++.... ..+++..+..++.||++||+|||++ +++|+||||+||+++.++.++|+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 889999997643 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc----
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT---- 534 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~---- 534 (618)
...... ....++..|+|||.+.+ ..++.++|||||||++|||++|.+||......+. +.........
T Consensus 154 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~ 225 (298)
T cd07841 154 SPNRKM----THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ----LGKIFEALGTPTEE 225 (298)
T ss_pred CCCccc----cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH----HHHHHHHcCCCchh
Confidence 432211 11235788999998754 4678999999999999999999877764332110 1111100000
Q ss_pred ----CCccchhccccccCC-----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 ----NSSLETAIDKSLLGN-----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ----~~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
............... ........+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 226 NWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred hhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000000000 01223456788888999999999999999987
No 267
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=6.6e-37 Score=306.79 Aligned_cols=238 Identities=21% Similarity=0.350 Sum_probs=185.6
Q ss_pred cEEeecCCeeEEEEEeCC--------CcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 312 NIIGTGRTGATYIAMLPG--------GCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+.||+|+||.||+|.... ...|++|.+.... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999998532 2358888876543 3345788999999999999999999999998999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc--------eEEcccCc
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE--------PKLSDFGL 454 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~DfG~ 454 (618)
+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++. ++++|||.
T Consensus 81 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKNK---NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 99999999997654 2589999999999999999999999 9999999999999987765 69999998
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCC-CCCCCCCCCCccccCHHHHHHHH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGE-RPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~-~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
+....... ...++..|+|||++.+ ..++.++||||||+++|||++|. .|+..... .......
T Consensus 155 ~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~--------~~~~~~~ 218 (258)
T cd05078 155 SITVLPKE--------ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS--------QKKLQFY 218 (258)
T ss_pred ccccCCch--------hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH--------HHHHHHH
Confidence 87543221 1236788999999876 45789999999999999999995 55443211 1111111
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
.... .+ +.....++.+++.+||+.||++|||++++++.|
T Consensus 219 ~~~~--------~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 219 EDRH--------QL----PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred Hccc--------cC----CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1100 01 111224577888899999999999999999876
No 268
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.7e-36 Score=300.55 Aligned_cols=247 Identities=20% Similarity=0.317 Sum_probs=198.0
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||+|++|.||++.. .+++.+|+|++.... ...+.+.+|++++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999999995 568899999986532 3356788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEcccCcccccCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDFGLARLMNPV 461 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~~~ 461 (618)
+++++|.+++..... ..+++..+..++.|++.||+|||++ +++|+||||+||+++.+ +.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRCN--SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999976432 4589999999999999999999999 99999999999999855 45899999999876533
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.. .......... ..
T Consensus 156 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--------~~~~~~~~~~-~~-- 219 (256)
T cd08220 156 SKA-----YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--------ALVLKIMSGT-FA-- 219 (256)
T ss_pred ccc-----cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--------HHHHHHHhcC-CC--
Confidence 211 1223788999999999888999999999999999999999998653321 1111111100 00
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.........+.+++.+||+.+|.+|||+.|+++
T Consensus 220 -------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 -------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 001123345677888999999999999999975
No 269
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-37 Score=312.06 Aligned_cols=251 Identities=20% Similarity=0.316 Sum_probs=196.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 380 (618)
...|++.++||+||.+.||++...+.+.||+|++... .....-|.+|+..|.+++ |.+||++++|-..++..||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 3568999999999999999999888888898887543 344567999999999995 999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||-+. +|..+|.+... ....| .++.+..||+.|+.++|.+ ||||.||||.|+|+- .|.+||+|||+|..+..
T Consensus 440 E~Gd~-DL~kiL~k~~~--~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 440 ECGDI-DLNKILKKKKS--IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQP 511 (677)
T ss_pred ecccc-cHHHHHHhccC--CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence 98754 99999987764 23334 7888999999999999999 999999999999984 46899999999998765
Q ss_pred CCCcccccccCCCCcccccCCCCCCCC-----------CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTL-----------VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
..+.. .....+||..||+||.+... +.++++||||+|||||+|+.|+.||.... ..|.
T Consensus 512 DTTsI--~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~---------n~~a 580 (677)
T KOG0596|consen 512 DTTSI--VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII---------NQIA 580 (677)
T ss_pred cccce--eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH---------HHHH
Confidence 44332 23356799999999976532 36789999999999999999999997421 1222
Q ss_pred HHHhcCCccchhccccccCCCCH-HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFD-GELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+. ..+.++.-.-+++. ....+++++++.||..||++||++.|+++
T Consensus 581 Kl-------~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 KL-------HAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HH-------HhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 21 22223321111100 11123889999999999999999999975
No 270
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.5e-36 Score=308.73 Aligned_cols=264 Identities=22% Similarity=0.295 Sum_probs=197.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|+..+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999965 58999999986532 234568899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++++|.++..... .+++..++.++.|++.||+|||+. +++||||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKYPN----GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 999988887765432 389999999999999999999999 9999999999999999999999999998865433
Q ss_pred CCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH-------Hh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL-------LN 533 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~-------~~ 533 (618)
... .....++..|+|||+..+ ..++.++||||||+++|||++|++||......+... .+..+... ..
T Consensus 154 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 154 GEV----YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLY-HIIKCLGNLIPRHQEIF 228 (286)
T ss_pred ccc----cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHH-HHHHHhCCCchhhHHHh
Confidence 221 112337889999998765 457889999999999999999999986433211000 00000000 00
Q ss_pred cCCc-cchhccccccCC-----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSS-LETAIDKSLLGN-----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~-~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ......+..... ........+.+++.+||+.+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000 000000000000 01122456788888999999999999999875
No 271
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.8e-37 Score=319.35 Aligned_cols=239 Identities=21% Similarity=0.217 Sum_probs=182.6
Q ss_pred EeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC---CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV---RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 314 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
||+|+||.||+|+. .+++.||+|++.... .....+..|..++.+. +||||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999995 468999999986432 1223345566676655 699999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~- 152 (330)
T cd05586 81 GELFWHLQKEG----RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT- 152 (330)
T ss_pred ChHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC-
Confidence 99998886543 489999999999999999999999 9999999999999999999999999998754322211
Q ss_pred cccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.....||..|+|||++.+. .++.++|||||||++|||++|+.||..... .+........ . .
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--------~~~~~~i~~~-~------~ 214 (330)
T cd05586 153 ---TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--------QQMYRNIAFG-K------V 214 (330)
T ss_pred ---ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--------HHHHHHHHcC-C------C
Confidence 1233489999999988754 478999999999999999999999975332 1111111111 0 0
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHT----MFEVYQ 581 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 581 (618)
.+.....+ ..+.+++.+||+.||.+||+ +.|+++
T Consensus 215 ~~~~~~~~---~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 215 RFPKNVLS---DEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CCCCccCC---HHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 11111122 34556777999999999984 555543
No 272
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.5e-36 Score=303.63 Aligned_cols=258 Identities=26% Similarity=0.375 Sum_probs=202.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|++.+.||.|++|.||+|.. .++..+++|++.... ...+.+.+|++.++.++|+||+++++.+...+..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4688999999999999999994 468899999986543 3456789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999865422 13589999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
...........++..|+|||++... .++.++|+|||||++|||++|+.||....... ...+... ..
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~----~~~~~~~---~~------ 223 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK----VLMLTLQ---ND------ 223 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh----hHHHHhc---CC------
Confidence 2211111223478899999988766 78999999999999999999999997543211 1111111 10
Q ss_pred ccccccCCC-CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNG-FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+.+.... .......+.+++.+|++.||++||++.|+++
T Consensus 224 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 -PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00111100 1123456778888999999999999999975
No 273
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.6e-36 Score=300.07 Aligned_cols=246 Identities=23% Similarity=0.324 Sum_probs=196.9
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
+|+..+.||+|++|.||+|... ++..|++|.+.... ...+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999965 78999999886432 2345788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKKYG----SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999999986543 488999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLV-ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
.... .....++..|+|||.+.... ++.++|+||||+++|+|++|+.||..... .............
T Consensus 154 ~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~ 220 (258)
T cd06632 154 EFSF-----AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--------VAAVFKIGRSKEL 220 (258)
T ss_pred cccc-----ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--------HHHHHHHHhcccC
Confidence 3221 12234788999999887666 89999999999999999999999975331 1111111110000
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .........+.+++.+|++.+|.+||++.++++
T Consensus 221 ~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 P---------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred C---------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 001112345667777999999999999999975
No 274
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=8.8e-36 Score=304.10 Aligned_cols=264 Identities=19% Similarity=0.217 Sum_probs=194.4
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++++|.+.+.||+|+||.||+|.. .++..|++|++.... .....+.+|+.++++++|+||+++++++...+..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 467899999999999999999985 568899999986532 33346788999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+. +++.+++.... ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQHP---GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 57776664432 3478888999999999999999999 999999999999999999999999999876433
Q ss_pred CCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH--------
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL-------- 531 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~-------- 531 (618)
.... .....++..|+|||++.+. .++.++|||||||++|||++|+.||....... ..+.+....
T Consensus 156 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~ 228 (291)
T cd07870 156 PSQT----YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF---EQLEKIWTVLGVPTEDT 228 (291)
T ss_pred CCCC----CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH---HHHHHHHHHcCCCChhh
Confidence 2211 1122368899999988654 57889999999999999999999997543210 001000000
Q ss_pred ---HhcCCccchhccccccCCCC------HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 532 ---LNTNSSLETAIDKSLLGNGF------DGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 532 ---~~~~~~~~~~~d~~l~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.................... ......+.+++.+|+..||++|||++|++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 229 WPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000000000 011345667788999999999999999864
No 275
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.2e-36 Score=303.33 Aligned_cols=256 Identities=23% Similarity=0.383 Sum_probs=196.7
Q ss_pred CCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 007088 308 FSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ 374 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 374 (618)
|.+.+.||+|+||.||+|... ++..||+|++.... ...+++.+|+.++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999843 36899999987543 23456889999999999999999999886542
Q ss_pred eeEEEEeecCCCccccccCCCC--CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAE--HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
..++++||+++|+|.+++.... .....+++...+.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2378999999999988764322 1223588999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|.++........... ....++..|++||......++.++||||||+++|||++ |+.||...... .+..+
T Consensus 158 g~~~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-----~~~~~--- 227 (273)
T cd05074 158 GLSKKIYSGDYYRQG--CASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-----EIYNY--- 227 (273)
T ss_pred cccccccCCcceecC--CCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-----HHHHH---
Confidence 999865432211111 11224578999999988889999999999999999999 88888643221 11111
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
........ ........+.+++.+|++.+|++||++.|+++.|+++
T Consensus 228 ~~~~~~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 LIKGNRLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHcCCcCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111100 0112335788888899999999999999999999876
No 276
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.9e-36 Score=306.15 Aligned_cols=252 Identities=20% Similarity=0.302 Sum_probs=192.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINT-LGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|++.+.||+|+||.||++.. .+|+.||+|+++... ....++..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 4688899999999999999995 469999999987643 234456667665 556689999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++ |+|.+++.........+++..++.++.|++.||+|||+++ +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 997 5887777543322356899999999999999999999853 7999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCCCCCCC----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
... ....++..|+|||.+.+ ..++.++|+||||+++|||++|+.||..... ...... .....
T Consensus 158 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~-~~~~~-- 223 (283)
T cd06617 158 VAK-----TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT------PFQQLK-QVVEE-- 223 (283)
T ss_pred ccc-----ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc------CHHHHH-HHHhc--
Confidence 111 11237889999998764 4568899999999999999999999864221 111111 11100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+.+... .....+.+++.+||..+|++||++.++++
T Consensus 224 ----~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 ----PSPQLPAE---KFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ----CCCCCCcc---ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00111111 12345777888999999999999999976
No 277
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=315.83 Aligned_cols=243 Identities=29% Similarity=0.401 Sum_probs=197.6
Q ss_pred cCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.|+..+.||.|+||.||-|+ ..+...||||++..+. ..-.++..|+.+|.+++|||++.+.|+|......|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 35556779999999999999 5678999999997543 223578999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
||- |+-.|++...+ .++.+.++..|..+.+.||+|||+. +.||||||+.|||+++.|.+||+|||.|....+.
T Consensus 107 YCl-GSAsDlleVhk---KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred HHh-ccHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 995 48888876655 5689999999999999999999999 9999999999999999999999999999876653
Q ss_pred CCcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
. ..+|||.|||||++. .+.|+-++||||+|++..||.-.++|+...+. +.........+
T Consensus 180 n--------sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-------MSALYHIAQNe--- 241 (948)
T KOG0577|consen 180 N--------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNE--- 241 (948)
T ss_pred h--------cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-------HHHHHHHHhcC---
Confidence 3 334999999999865 57899999999999999999999999765432 22222222222
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.|.+....++++...|++ .||+.-|.+|||.+++++
T Consensus 242 ----sPtLqs~eWS~~F~~Fvd---~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 242 ----SPTLQSNEWSDYFRNFVD---SCLQKIPQERPTSEELLK 277 (948)
T ss_pred ----CCCCCCchhHHHHHHHHH---HHHhhCcccCCcHHHHhh
Confidence 233444445555555544 999999999999988754
No 278
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.5e-36 Score=302.41 Aligned_cols=245 Identities=24% Similarity=0.357 Sum_probs=197.3
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
|+..+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++.+++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 66788999999999999985 568999999986432 334578899999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.........
T Consensus 86 ~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06641 86 GGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchhh
Confidence 99999988642 488999999999999999999999 9999999999999999999999999998765432211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
. ....++..|+|||+..+..++.++|||||||++|+|++|..||..... ............ +
T Consensus 158 ~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~------~ 219 (277)
T cd06641 158 R----NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--------MKVLFLIPKNNP------P 219 (277)
T ss_pred h----ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--------HHHHHHHhcCCC------C
Confidence 1 122378899999999888889999999999999999999999864321 111111111100 0
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+ .......+.+++.+|++.+|.+||++.++++.
T Consensus 220 ~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 220 TL----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CC----CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 01 11233456777889999999999999999883
No 279
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.7e-36 Score=308.09 Aligned_cols=260 Identities=22% Similarity=0.280 Sum_probs=194.8
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||+|++|.||+|+. .+++.|++|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 478899999999999999985 468999999886432 2335788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+. ++|.+++..... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 588888865433 4589999999999999999999999 99999999999999999999999999987654322
Q ss_pred CcccccccCCCCcccccCCCCCCCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC-----
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLV-ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS----- 536 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~----- 536 (618)
... ....++..|+|||+..+.. ++.++||||||+++|||+||+.||......+ ...+.........
T Consensus 155 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~ 226 (284)
T cd07860 155 RTY----THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID----QLFRIFRTLGTPDEVVWP 226 (284)
T ss_pred ccc----ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHhCCCChhhhh
Confidence 211 1223678899999876544 5889999999999999999999997543211 1111111000000
Q ss_pred ----------ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 ----------SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ----------~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
........... .........+.+++.+|++.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 227 GVTSLPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhhHHHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000000000 000011234567888999999999999999975
No 280
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.9e-36 Score=304.83 Aligned_cols=249 Identities=27% Similarity=0.379 Sum_probs=199.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
++|.+.+.||+|+||.||++.. .++..|++|.+.... ...+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 6788899999999999999984 568899999986432 34566889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++++|.+++... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 99 AGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 999999998643 378899999999999999999999 999999999999999999999999998876544322
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.. ....+++.|+|||.+.+..++.++||||||+++|++++|+.||.......... ......
T Consensus 171 ~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~--------~~~~~~------- 231 (293)
T cd06647 171 KR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--------LIATNG------- 231 (293)
T ss_pred cc----ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee--------ehhcCC-------
Confidence 11 12237889999999988889999999999999999999999997543211100 000000
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.............+.+++.+||..+|++||++.+++..
T Consensus 232 -~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 232 -TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred -CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000111223456678889999999999999999753
No 281
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.7e-36 Score=303.26 Aligned_cols=252 Identities=23% Similarity=0.371 Sum_probs=201.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|+..+.||+|++|.||++... +++.|++|++.... ...+++.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999964 68999999987643 3456788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
+++++|.+++.... ..+++..+..++.|++.||+|||+ . +++|+||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999987653 358899999999999999999999 8 9999999999999999999999999998765332
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.... ..++..|+|||...+..++.++||||||+++|+|++|+.||...... .....+..........
T Consensus 155 ~~~~------~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~---- 221 (265)
T cd06605 155 LAKT------FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNEPP---- 221 (265)
T ss_pred Hhhc------ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc---cccHHHHHHHHhcCCC----
Confidence 1111 33788999999999889999999999999999999999999754321 1112222222111110
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+.. ......+.+++.+|+..||++|||+.|++.
T Consensus 222 --~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 222 --PRLPS---GKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred --CCCCh---hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 01100 113445777888999999999999999975
No 282
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.3e-36 Score=305.68 Aligned_cols=265 Identities=20% Similarity=0.277 Sum_probs=194.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|+..+.||+|++|.||+|... +++.||+|.+.... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999964 68999999986432 2234567899999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++ +|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~L~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LDT-DLKQYMDDCG---GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 985 8998886543 3588999999999999999999999 99999999999999999999999999987543211
Q ss_pred CcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH---------HHHHHHH
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL---------VEWITLL 532 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l---------~~~~~~~ 532 (618)
.. .....++..|+|||+..+ ..++.++||||+|+++|||++|+.||............. ..|....
T Consensus 158 ~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 158 KT----YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred cc----ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence 11 111235788999998765 457899999999999999999999996543110000000 0000000
Q ss_pred hcCCccc---hhc-cccccCCC-CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTNSSLE---TAI-DKSLLGNG-FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~~~~~---~~~-d~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....... ... ...+.... .......+.+++.+|++.+|++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000 000 00000000 0001256678888999999999999999875
No 283
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.6e-36 Score=299.56 Aligned_cols=251 Identities=25% Similarity=0.401 Sum_probs=203.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|++.+.||+|++|.||+|+.. +++.|++|++.... ...+.+.+|+..+.+++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999965 58999999987654 3456799999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
+++++|.+++... ..+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999999754 348999999999999999999999 8 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.... ....++..|+|||...+..++.++||||||+++|+|++|+.||...... ...+.........
T Consensus 154 ~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~----- 219 (264)
T cd06623 154 LDQC----NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP-----SFFELMQAICDGP----- 219 (264)
T ss_pred CCcc----cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc-----CHHHHHHHHhcCC-----
Confidence 3221 1123678999999999889999999999999999999999999765421 1111111111110
Q ss_pred ccccccCCCCHH-HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 542 IDKSLLGNGFDG-ELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 542 ~d~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+.+ ... ....+.+++.+|++.+|++||++.|+++.
T Consensus 220 -~~~~----~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 220 -PPSL----PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -CCCC----CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0011 111 34567778889999999999999999873
No 284
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7.3e-36 Score=300.35 Aligned_cols=250 Identities=19% Similarity=0.228 Sum_probs=193.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc------cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--Cee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 376 (618)
.+|++.+.||+|+||.||++.. .++..|++|.+.... ...+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999995 568999999885321 1234678899999999999999999998764 457
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG----ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 89999999999999986443 378889999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
......... .......++..|+|||.+.+..++.++|||||||++|||++|+.||...... .... ......
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~~-~~~~~~ 225 (265)
T cd06652 155 RLQTICLSG-TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-------AAIF-KIATQP 225 (265)
T ss_pred ccccccccc-cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-------HHHH-HHhcCC
Confidence 654321111 1112234788999999998888999999999999999999999999643211 1111 111000
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ....+......+.+++.+|+ .+|++||+++|+++
T Consensus 226 ~---------~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 226 T---------NPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred C---------CCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 0 01112233445667777888 49999999999875
No 285
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=304.52 Aligned_cols=246 Identities=20% Similarity=0.322 Sum_probs=206.4
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
+-|+..+.||+|-|..|-+|+ .=+|..||||++.+.+ .....+.+|+.-|+-++|||||++|++.......|+|+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 446667789999999999998 4589999999997654 345678899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee-CCCCceEEcccCcccccCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL-DGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~DfG~a~~~~~ 460 (618)
.-++|+|++||-+.. ..+.+....+++.||+.|+.|+|+. .+|||||||+||.+ ..-|-+||.|||++..+.+
T Consensus 98 LGD~GDl~DyImKHe---~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE---EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred ecCCchHHHHHHhhh---ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 999999999998766 3589999999999999999999999 99999999999876 5678899999999987765
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVAT-PKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
... ....+|+..|-|||++.+..|+ +++||||+|||||.|++|++||+..++.+....
T Consensus 172 G~k-----L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTm---------------- 230 (864)
T KOG4717|consen 172 GKK-----LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTM---------------- 230 (864)
T ss_pred cch-----hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhh----------------
Confidence 432 3345699999999999998886 589999999999999999999997665443221
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
++|- +...++....++.+||..||..||++|.+.+||..
T Consensus 231 -ImDC--KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 231 -IMDC--KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -hhcc--cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 1221 12234555667778888999999999999999865
No 286
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4e-36 Score=306.87 Aligned_cols=246 Identities=24% Similarity=0.334 Sum_probs=193.9
Q ss_pred CCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 309 SKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 309 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
.....||+|+||.||++.. .++..||||.+.... ...+.+.+|+..+++++|+||+++++.+...+..++||||++++
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 104 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG 104 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence 3346799999999999985 468899999986533 33456889999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++..........
T Consensus 105 ~L~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~- 175 (292)
T cd06658 105 ALTDIVTHT-----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR- 175 (292)
T ss_pred cHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC-
Confidence 999987532 388999999999999999999999 99999999999999999999999999987654322211
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccc
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSL 546 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 546 (618)
....++..|+|||+..+..++.++||||||+++|||++|+.||...... ....... ....+.+
T Consensus 176 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~------~~~~~~~ 238 (292)
T cd06658 176 ---KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--------QAMRRIR------DNLPPRV 238 (292)
T ss_pred ---ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH------hcCCCcc
Confidence 1234788999999998888999999999999999999999999753321 0011100 0011111
Q ss_pred cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 547 LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.. .......+.+++.+|+..||.+|||++|+++.
T Consensus 239 ~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 239 KD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11 01122356667779999999999999999863
No 287
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.3e-35 Score=301.79 Aligned_cols=264 Identities=22% Similarity=0.269 Sum_probs=198.4
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|++.+.||+|++|.||+|.. .+|+.|++|++.... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 478889999999999999995 478999999987543 3346789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+ +++|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 999999886543 4589999999999999999999999 99999999999999999999999999998765432
Q ss_pred CcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccC--------HHHHHHHHh
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS--------LVEWITLLN 533 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~--------l~~~~~~~~ 533 (618)
.. ......++..|+|||++.+. .++.++||||+|+++|||++|++||......+..... ...|....
T Consensus 154 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (286)
T cd07832 154 PR---LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT- 229 (286)
T ss_pred CC---ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc-
Confidence 11 11223478899999987654 4689999999999999999998877643321100000 00010000
Q ss_pred cCCccchhcccccc----CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLL----GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..........+.-. .....+....+.+++.+|++.||++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000000000000 0001123367788888999999999999999975
No 288
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=9.4e-36 Score=300.68 Aligned_cols=253 Identities=26% Similarity=0.373 Sum_probs=195.5
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----c-------CHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----H-------SEKEFLSEINTLGSVRHRNLVPLLGFCVAKK 374 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 374 (618)
+|...+.||+|++|.||+|.. .+++.||+|.++... . ..+.+.+|+.++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999984 568999999885321 0 1245788999999999999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG----RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 9999999999999999987653 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV--ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
++......... ......++..|+|||...... ++.++||||||+++||+++|..||..... ........
T Consensus 155 ~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~ 225 (272)
T cd06629 155 SKKSDDIYDND--QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-------IAAMFKLG 225 (272)
T ss_pred ccccccccccc--ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-------HHHHHHhh
Confidence 97654321111 112234788999999877654 78999999999999999999999864321 11111111
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. .....++... .......+.+++.+|+..+|++||++.++++
T Consensus 226 -~~-~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 226 -NK-RSAPPIPPDV----SMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred -cc-ccCCcCCccc----cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 00 0011111111 1122356777778999999999999999875
No 289
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.9e-35 Score=301.53 Aligned_cols=243 Identities=22% Similarity=0.288 Sum_probs=196.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|+..+.||+|++|.||++.. .+++.||+|.++... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 4688899999999999999995 468999999986532 23456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~----~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRKSG----RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 9999999999987653 489999999999999999999999 999999999999999999999999999987644
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.. ....+++.|+|||.+.+...+.++||||||+++|+|++|+.||..... .......... .
T Consensus 154 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~-~--- 214 (290)
T cd05580 154 RT-------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--------IQIYEKILEG-K--- 214 (290)
T ss_pred CC-------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcC-C---
Confidence 31 122478999999999888889999999999999999999999975331 0111111110 0
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
..+ +......+.+++.+||..||.+|| +++|+++
T Consensus 215 ---~~~----~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 215 ---VRF----PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---ccC----CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 001 111234566777799999999999 6666653
No 290
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.1e-35 Score=300.90 Aligned_cols=246 Identities=23% Similarity=0.351 Sum_probs=196.7
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCC---CCCccceeEEEEeCCeeEEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVR---HRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~ 380 (618)
.|+..+.||+|+||.||+|.. .+++.|++|.+... ....+++.+|+.++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999995 67899999998653 234567889999999996 999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++... .+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 999999999988543 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
..... ....|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... .+.......
T Consensus 154 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--------~~~~~~~~~---- 217 (277)
T cd06917 154 NSSKR----STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--------RAMMLIPKS---- 217 (277)
T ss_pred Ccccc----ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--------hhhhccccC----
Confidence 33211 12247889999998765 45689999999999999999999999753321 111100000
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+.+... .....+.+++.+|++.||++||++.|+++
T Consensus 218 --~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 218 --KPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred --CCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 11111111 13346777888999999999999999976
No 291
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=320.36 Aligned_cols=254 Identities=27% Similarity=0.389 Sum_probs=209.7
Q ss_pred CCCcEEeecCCeeEEEEEe-CCC----cEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 309 SKNNIIGTGRTGATYIAML-PGG----CFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 309 ~~~~~lG~G~~g~Vy~~~~-~~~----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
...++||+|+||+||+|.+ +.| -+||+|++.... ...+++..|+.+|.+++|||+++++++|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3468899999999999994 444 478999986643 45788999999999999999999999998766 789999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++.|+|.++++..+ ..+-....+.|..|||+||.|||.+ +++||||-.+|||+.....+|+.|||+++.....
T Consensus 778 ~mP~G~LlDyvr~hr---~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHR---DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHHhh---ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 999999999998766 4588899999999999999999999 9999999999999999999999999999998776
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
........ ..-.+.|||-|.+....|+.++|||||||++||++| |..|++.....+ + .+
T Consensus 852 ~~ey~~~~--gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e---------I---------~d 911 (1177)
T KOG1025|consen 852 EKEYSAPG--GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE---------I---------PD 911 (1177)
T ss_pred cccccccc--cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH---------h---------hH
Confidence 54433321 113567999999999999999999999999999999 999988654321 1 11
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.+...-+-..+.-...++..++.+||..|+..||+++++...+.+.+..
T Consensus 912 lle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 912 LLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred HHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 1111112233445667888899999999999999999999999988765
No 292
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.4e-37 Score=317.88 Aligned_cols=242 Identities=24% Similarity=0.355 Sum_probs=189.5
Q ss_pred CcEEeecCCeeEEEEEe-CCCcEEEE---EEec--cCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe--eEEEEee
Q 007088 311 NNIIGTGRTGATYIAML-PGGCFIMI---KRLE--DSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE--RLLVYSY 382 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~-~~~~~vav---K~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lV~e~ 382 (618)
..+||+|+|-+||+|.. .+|..||= |.-+ ++....++|..|+.+|+.|+||||+++|+++.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 35799999999999995 45766662 2221 233444789999999999999999999999988765 6699999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-CCceEEcccCcccccCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~~ 461 (618)
+..|+|+.|+.+.+. ++...++.|++||++||.|||++ .|+|+|||||.+||||+. .|.+||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~~~----vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR----VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ccCCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999987764 88889999999999999999997 678999999999999975 589999999999987654
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.... ..|||.|||||++. ..|++.+||||||+.++||+|+..||.....+. +..+.....-.
T Consensus 200 ~aks------vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A-------QIYKKV~SGiK---- 261 (632)
T KOG0584|consen 200 HAKS------VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA-------QIYKKVTSGIK---- 261 (632)
T ss_pred ccce------eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH-------HHHHHHHcCCC----
Confidence 4322 34999999999987 789999999999999999999999998654421 22222211111
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
|.-.....+.+ +.++|.+|+.. ..+|||+.|+++
T Consensus 262 --P~sl~kV~dPe---vr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 262 --PAALSKVKDPE---VREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred --HHHhhccCCHH---HHHHHHHHhcC-chhccCHHHHhh
Confidence 10011112234 44555599999 999999999975
No 293
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-37 Score=316.64 Aligned_cols=249 Identities=22% Similarity=0.326 Sum_probs=204.6
Q ss_pred CcEEeecCCeeEEEEEeC--CC--cEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 311 NNIIGTGRTGATYIAMLP--GG--CFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++||+|.||.|++|.+. +| ..||||.++.+.. ...+|.+|+.+|.+|+|+|++++||+..+ ....||||.++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 568999999999999964 34 5789999987653 56789999999999999999999999987 66789999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
.|+|.+.|++.. ...+.......++.|||.||.||.++ ++|||||..+|+++-....+||+|||+.+.++..+..
T Consensus 194 lGSLldrLrka~--~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 194 LGSLLDRLRKAK--KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cchHHHHHhhcc--ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 999999998833 25688888999999999999999999 9999999999999999999999999999988776554
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
+... ...--.+.|+|||.+...+++.++|||+|||++|||+| |..||-..... +. .+.+|
T Consensus 269 Yvm~-p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--------qI----------L~~iD 329 (1039)
T KOG0199|consen 269 YVMA-PQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--------QI----------LKNID 329 (1039)
T ss_pred eEec-CCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------HH----------HHhcc
Confidence 4221 12224678999999999999999999999999999998 88898764321 11 12222
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
..-.-..+..+.+++.+++.+||..+|++|||+..|.+.+-
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 22222334557788999999999999999999999975443
No 294
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.2e-36 Score=308.74 Aligned_cols=257 Identities=18% Similarity=0.204 Sum_probs=198.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|+..+.||+|+||.||++.. ..++.|++|.+.... ...+.+.+|+++++.++||||+++++.+..+++.++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3688899999999999999995 457899999986542 23456789999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKNIG----ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 9999999999996543 489999999999999999999999 999999999999999999999999999874211
Q ss_pred CCCc-----------ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 461 VDTH-----------LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 461 ~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
.... .........++..|+|||++.+..++.++||||||+++||+++|+.||..... .+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~ 225 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELF 225 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHH
Confidence 1000 00000112467899999999888899999999999999999999999964321 1111
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
........ ..+.. .......+.+++.+|++.||++||++.++.+.|+.
T Consensus 226 ~~~~~~~~----~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 226 GQVISDDI----EWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHhccc----CCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11111100 00000 01223456778889999999999998777666654
No 295
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.5e-36 Score=309.11 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=194.2
Q ss_pred CCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC-ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCc
Q 007088 310 KNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGT 387 (618)
Q Consensus 310 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 387 (618)
....||+|+||.||++.. .+++.||+|.+... ....+.+.+|+.++..++||||+++++++...+..++||||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 345799999999999985 47899999998643 2345678899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccc
Q 007088 388 LYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467 (618)
Q Consensus 388 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 467 (618)
|.+++.. ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 105 L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~-- 174 (297)
T cd06659 105 LTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR-- 174 (297)
T ss_pred HHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc--
Confidence 9987754 2388999999999999999999999 99999999999999999999999999987654322111
Q ss_pred cccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccccc
Q 007088 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLL 547 (618)
Q Consensus 468 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 547 (618)
....++..|+|||++.+..++.++|||||||++|||++|+.||...... +.......... . ..
T Consensus 175 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~-~-----~~- 237 (297)
T cd06659 175 --KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--------QAMKRLRDSPP-P-----KL- 237 (297)
T ss_pred --cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhccCC-C-----Cc-
Confidence 1234789999999998888999999999999999999999999753321 11111111000 0 00
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 548 GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 548 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.........+.+++.+|++.+|++||++.|+++.
T Consensus 238 -~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 238 -KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred -cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0011122356677779999999999999999874
No 296
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.1e-36 Score=299.15 Aligned_cols=248 Identities=21% Similarity=0.310 Sum_probs=198.4
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||+|+||.||++.. .+|..||+|.+... ....+.+.+|+.++++++|+||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 477889999999999999995 45889999998653 23445788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-ceEEcccCcccccCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-EPKLSDFGLARLMNPV 461 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~ 461 (618)
+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++ .+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 999999999875433 3589999999999999999999999 999999999999999885 4699999999766532
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.... ....|++.|+|||+..+..++.++||||||+++|||++|+.||..... .++....... ....
T Consensus 156 ~~~~----~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~-~~~~- 221 (257)
T cd08225 156 MELA----YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL--------HQLVLKICQG-YFAP- 221 (257)
T ss_pred cccc----cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHhcc-cCCC-
Confidence 2211 122378899999999888899999999999999999999999864321 2222221111 1000
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
........+.+++.+|+..+|++|||+.|+++
T Consensus 222 --------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 222 --------ISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred --------CCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 01112345777788999999999999999975
No 297
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.7e-35 Score=301.23 Aligned_cols=266 Identities=23% Similarity=0.245 Sum_probs=198.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|+..+.||+|++|.||+|... +++.|++|+++... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999964 58899999986532 334678999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++++.+..+.... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEASP----GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 99987776655433 3489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH-------HHHHHHHh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL-------VEWITLLN 533 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l-------~~~~~~~~ 533 (618)
.... .....++..|+|||++.+. .++.++||||||+++|+|++|+.||......+...... ........
T Consensus 154 ~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 154 PASP---LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred cccc---ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 3211 1123467889999998887 88999999999999999999999997543211000000 00000000
Q ss_pred cCCccch--hcc---cc-ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLET--AID---KS-LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~--~~d---~~-l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....... ..+ .. +..........++.+++.+||..+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000000 000 00 000001112567888888999999999999999875
No 298
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-35 Score=305.34 Aligned_cols=270 Identities=22% Similarity=0.249 Sum_probs=196.4
Q ss_pred cCCCCcEEeecCCeeEEEEEeC---CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP---GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERL 377 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 377 (618)
+|++.++||+|++|.||+|... ++..||+|.+.... ...+.+.+|+.++.+++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999954 47999999997632 2345678899999999999999999999988 7899
Q ss_pred EEEeecCCCccccccCCCCCC-CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC----CCceEEccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHE-VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG----DFEPKLSDF 452 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~Df 452 (618)
+||||+++ +|.+.+...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 676666433221 23689999999999999999999999 9999999999999999 899999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc-----cCHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK-----GSLV 526 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~-----~~l~ 526 (618)
|++......... ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... ..+.
T Consensus 157 g~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 157 GLARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred ccccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999876443221 111123347889999998765 457899999999999999999999998654332000 0011
Q ss_pred HHHHHHhcC-----------CccchhccccccCCCC----H-------HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 527 EWITLLNTN-----------SSLETAIDKSLLGNGF----D-------GELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 527 ~~~~~~~~~-----------~~~~~~~d~~l~~~~~----~-------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+...... .......+........ . .....+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111110000 0000000000000000 0 22346788888999999999999999975
No 299
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.3e-36 Score=305.48 Aligned_cols=265 Identities=21% Similarity=0.219 Sum_probs=196.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV 379 (618)
++|+..+.||+|+||.||+|... +++.+++|.++... .....+.+|++++.+++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 56888999999999999999964 68899999996533 2234567899999999999999999999877 789999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++ +|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 85 ~e~~~~-~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETMK---QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999975 8988886543 2589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH--------HHHH
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV--------EWIT 530 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~--------~~~~ 530 (618)
...... ....++..|+|||.+.+. .++.++||||+|+++|||++|+.||......+....... .|..
T Consensus 158 ~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (293)
T cd07843 158 SPLKPY----TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPG 233 (293)
T ss_pred CCcccc----ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHH
Confidence 432111 123367889999987654 468999999999999999999999975432111100000 0100
Q ss_pred HHh---cC-CccchhccccccCCCCHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 531 LLN---TN-SSLETAIDKSLLGNGFDG-ELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 531 ~~~---~~-~~~~~~~d~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... .. ..........+....... ....+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 00 000000000011111111 2455677888999999999999999975
No 300
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.3e-35 Score=302.12 Aligned_cols=252 Identities=25% Similarity=0.395 Sum_probs=203.2
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++.|+..+.||+|++|.||++... ++..|++|++.......+.+.+|++.+++++|+|++++++++...+..++|+||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 4567888899999999999999965 688999999976554567789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+.......
T Consensus 97 ~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 97 MDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred cCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 99999999997654 3599999999999999999999998 99999999999999999999999999887654322
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ....++..|+|||++.+..++.++||||||+++|+|++|+.||...... ......... ....
T Consensus 171 ~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~~~-- 235 (286)
T cd06614 171 SKR----NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--------RALFLITTK-GIPP-- 235 (286)
T ss_pred hhh----ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhc-CCCC--
Confidence 111 1123678999999998888999999999999999999999998643221 111111110 0000
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .........+.+++.+|++.+|.+||++.++++
T Consensus 236 ---~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 ---L--KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ---C--cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0 001113346777888999999999999999975
No 301
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.2e-35 Score=301.70 Aligned_cols=264 Identities=19% Similarity=0.196 Sum_probs=193.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCe-----
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKE----- 375 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 375 (618)
++|++.+.||+|+||.||+|.. .+++.||+|.++... .....+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4688899999999999999995 468999999886532 23456888999999995 6999999999987665
Q ss_pred eEEEEeecCCCccccccCCCCCC-CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-CCceEEcccC
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHE-VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFG 453 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG 453 (618)
.++||||+++ +|.+++...... ...+++..++.++.||+.||.|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 888887654322 34689999999999999999999999 9999999999999998 8899999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
+++......... ....+++.|+|||++.+ ..++.++||||||+++|+|++|..||......+. +.......
T Consensus 157 ~~~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~~ 228 (295)
T cd07837 157 LGRAFSIPVKSY----THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ----LLHIFKLL 228 (295)
T ss_pred cceecCCCcccc----CCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHHHh
Confidence 987654322111 11236788999998764 4578999999999999999999999975432111 00000000
Q ss_pred hcC-C-ccchhc-------cccccC----CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTN-S-SLETAI-------DKSLLG----NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~-~-~~~~~~-------d~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... . ...... .+.... .........+.+++.+||..||.+||++.|++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 0 000000 000000 000123355778888999999999999999875
No 302
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.9e-35 Score=304.11 Aligned_cols=245 Identities=27% Similarity=0.347 Sum_probs=193.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
+.|+..+.||+|+||.||+|+. .+++.||+|.+.... ...+++.+|++++++++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4588889999999999999995 468999999986432 22356889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||++ |++.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~~---~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVHK---KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 47777665332 3589999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
.. ...++..|+|||++. ...++.++||||||+++|||++|+.||...... ..........
T Consensus 168 ~~--------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~--------~~~~~~~~~~- 230 (307)
T cd06607 168 AN--------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQND- 230 (307)
T ss_pred CC--------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH--------HHHHHHhcCC-
Confidence 21 123678999999874 456889999999999999999999998653211 1111111000
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+.+. .......+.+++.+||+.||++||++.+++..
T Consensus 231 -----~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 231 -----SPTLS---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -----CCCCC---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00110 12234567888889999999999999999864
No 303
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9.6e-36 Score=302.42 Aligned_cols=260 Identities=23% Similarity=0.301 Sum_probs=195.2
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
|++.+.||.|++|.||+|.. .+|..|++|++.... ...+.+.+|++++++++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 66788999999999999995 579999999986532 23456889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
+ ++|.+++..... ..+++..++.++.|+++||+|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 689998865542 3589999999999999999999999 999999999999999999999999999976543221
Q ss_pred cccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC------
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS------ 536 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~------ 536 (618)
.. ....++..|+|||++.+. .++.++||||||+++|||++|+.||....... .+...........
T Consensus 155 ~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd07835 155 TY----THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID----QLFRIFRTLGTPDEDVWPG 226 (283)
T ss_pred cc----CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHHhhh
Confidence 11 112367889999987654 56889999999999999999999997543211 1111111000000
Q ss_pred -----ccchhccc---cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 -----SLETAIDK---SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 -----~~~~~~d~---~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.....+.. .............+.+++.+|++.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 227 VTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000000 0000001112246778888999999999999999975
No 304
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1e-35 Score=297.15 Aligned_cols=248 Identities=21% Similarity=0.273 Sum_probs=201.8
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|++.++||+|++|.||++.. .+++.+++|.+.... ....++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 478889999999999999984 478899999987532 3345678899999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++.........+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 999999999876433335689999999999999999999999 99999999999999999999999999998765431
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
. ....++..|+|||...+..++.++|+||+|+++|||++|+.||...+.. +...... ...
T Consensus 158 ~------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~-~~~----- 217 (256)
T cd08530 158 A------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--------DLRYKVQ-RGK----- 217 (256)
T ss_pred c------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHh-cCC-----
Confidence 1 1233788999999999988999999999999999999999999753321 1111111 100
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..........++.+++.+|++.+|++||++.|+++
T Consensus 218 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 218 ----YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ----CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 01112234466788888999999999999999975
No 305
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.3e-35 Score=300.23 Aligned_cols=246 Identities=23% Similarity=0.358 Sum_probs=196.2
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
|...+.||+|++|.||++.. .+++.|++|++.... ...+.+.+|+.++++++||||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44567999999999999995 578899999886433 3345688999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
++|.+++... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+..........
T Consensus 101 ~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~ 172 (285)
T cd06648 101 GALTDIVTHT-----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR 172 (285)
T ss_pred CCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc
Confidence 9999998652 388999999999999999999999 99999999999999999999999999887554322111
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
....|+..|+|||...+..++.++||||||+++|||++|+.||..... ........... .+.
T Consensus 173 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--------~~~~~~~~~~~------~~~ 234 (285)
T cd06648 173 ----KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--------LQAMKRIRDNL------PPK 234 (285)
T ss_pred ----ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHhcC------CCC
Confidence 123478899999999888899999999999999999999999865321 11111111110 000
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. ........+.+++.+||+.+|++||++.++++
T Consensus 235 ~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 235 LK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred Cc--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 10 01112346778888999999999999999985
No 306
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.6e-35 Score=300.82 Aligned_cols=266 Identities=20% Similarity=0.269 Sum_probs=197.2
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
+|+..+.||.|++|.||+|+. .+|..||+|.++... ...+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 578899999999999999996 468999999987543 33456788999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++........
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 85 88888765432 24589999999999999999999999 999999999999999999999999999976543211
Q ss_pred cccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH-------HHHHhcC
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW-------ITLLNTN 535 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~-------~~~~~~~ 535 (618)
. .....++..|++||.+.+ ..++.++||||||+++|+|++|+.||......+........+ .......
T Consensus 156 ~----~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07836 156 T----FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQL 231 (284)
T ss_pred c----cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcC
Confidence 1 112236788999998765 456889999999999999999999997654322111100000 0000000
Q ss_pred Cccchhcccc---ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 536 SSLETAIDKS---LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~---l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......... ............+.+++.+|++.||.+||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000 000001122356778888999999999999999875
No 307
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.3e-35 Score=302.43 Aligned_cols=262 Identities=21% Similarity=0.261 Sum_probs=193.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 374 (618)
.++|+..++||+|+||.||+|.. .+++.||+|.+.... .....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 45789999999999999999995 468999999885432 22345678999999999999999999987654
Q ss_pred --eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 375 --ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 375 --~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
..++||||+.+ +|.+++.... ..+++.+++.++.|++.||+|||++ +++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN---VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 34999999965 8887775443 3589999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|++..................++..|+|||.+.+. .++.++||||||+++|||++|+.||....... .......
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~-----~~~~~~~ 238 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH-----QLTLISQ 238 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHH
Confidence 99987644322211112233467889999987654 46889999999999999999999987543211 0000001
Q ss_pred HhcC---------------------CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 532 LNTN---------------------SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 532 ~~~~---------------------~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ..........+... .....+.+++.+||..||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 239 LCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPY---VKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HhCCCChhhcccccchhhhhhccCCCccchhhHHhcccc---cCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 00000000000000 01234567888999999999999999975
No 308
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.9e-36 Score=325.21 Aligned_cols=270 Identities=18% Similarity=0.197 Sum_probs=186.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCC--CcEEEEE------------------EeccCccCHHHHHHHHHHHhcCCCCCc
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPG--GCFIMIK------------------RLEDSQHSEKEFLSEINTLGSVRHRNL 363 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~E~~~l~~l~h~ni 363 (618)
..++|++.+.||+|+||.||++..+. +..++.| .+.........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987432 2222222 222222334568899999999999999
Q ss_pred cceeEEEEeCCeeEEEEeecCCCccccccCCCCCC-CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC
Q 007088 364 VPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHE-VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442 (618)
Q Consensus 364 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 442 (618)
+++++++...+..|+|+|++. ++|.+++...... ........+..++.||+.||+|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999985 4777766543211 12234567788999999999999999 999999999999999
Q ss_pred CCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc
Q 007088 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~ 522 (618)
.++.+||+|||+++.+....... .....||..|+|||++.+..++.++|||||||++|||++|..++........ .
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~-~ 377 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAF---DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP-G 377 (501)
T ss_pred CCCCEEEEeCCCceecCcccccc---cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH-H
Confidence 99999999999998765432211 1123589999999999999999999999999999999998865433221110 0
Q ss_pred cCHHHHHHHHhcC-C-------ccchhcccc-c--cCCCCH------HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 523 GSLVEWITLLNTN-S-------SLETAIDKS-L--LGNGFD------GELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 523 ~~l~~~~~~~~~~-~-------~~~~~~d~~-l--~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+.+........ . ...+.++.. + ...... .....+.+++.+||+.||++|||+.|+++
T Consensus 378 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0111111100000 0 000000000 0 000000 01234667788999999999999999976
No 309
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.3e-35 Score=299.20 Aligned_cols=241 Identities=21% Similarity=0.245 Sum_probs=183.5
Q ss_pred EEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHH---hcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 313 IIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTL---GSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.||+|+||.||++.. .+++.||+|.+.... .....+.+|..++ ...+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999995 568999999886532 1122344454433 33479999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~- 152 (279)
T cd05633 81 GGDLHYHLSQHG----VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (279)
T ss_pred CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-
Confidence 999999886543 489999999999999999999999 999999999999999999999999999875543211
Q ss_pred ccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
....|+..|+|||... +..++.++||||+||++|||++|+.||....... ... ....... ..
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~-~~~~~~~------~~ 215 (279)
T cd05633 153 -----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHE-IDRMTLT------VN 215 (279)
T ss_pred -----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC-----HHH-HHHHhhc------CC
Confidence 1224889999999876 4568899999999999999999999997543211 111 1110000 00
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQL 582 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 582 (618)
..+ +......+.+++.+||..||++|| +++|+++.
T Consensus 216 ~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 216 VEL----PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred cCC----ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 111 112334566777799999999999 58888663
No 310
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.1e-35 Score=295.65 Aligned_cols=246 Identities=22% Similarity=0.230 Sum_probs=198.8
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
+|++.+.||.|+||.||++... +++.|++|.+.... ...+.+.+|++++++++||||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999964 68999999996532 345678999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++++|.+++... .++++..+..++.|+++||.|||+. +++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999998754 3589999999999999999999999 9999999999999999999999999998865443
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.. .....++..|+|||...+..++.++|+||||+++|+|++|+.||...... ...+....... ..
T Consensus 154 ~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~--~~-- 218 (258)
T cd05578 154 TL-----TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRAKQET--AD-- 218 (258)
T ss_pred cc-----ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHHHhcc--cc--
Confidence 21 12234788999999998888999999999999999999999999764421 11111111110 00
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH--HHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM--FEVY 580 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 580 (618)
...+......+.+++.+||+.||.+||++ +|++
T Consensus 219 ------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 219 ------VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ------ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 01111223567788889999999999999 5543
No 311
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=340.51 Aligned_cols=254 Identities=27% Similarity=0.406 Sum_probs=203.1
Q ss_pred HhhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
..+-++....+||.|.||.||-|. .++|...|+|-++-. ....+.+.+|+.++..++|||+|+++|+-...+..++
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 345678889999999999999999 678999999987543 2344567899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
.||||++|+|.+.+...+. .++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|..+
T Consensus 1312 FMEyC~~GsLa~ll~~gri----~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRI----EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHhccCcHHHHHHhcch----hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEe
Confidence 9999999999999976653 66777788899999999999999 9999999999999999999999999999988
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCC---CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh-c
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLV---ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN-T 534 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~-~ 534 (618)
...............||+.|||||++.+.. ...+.||||+||++.||+||+.||...+. +|.-.+. .
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---------e~aIMy~V~ 1455 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---------EWAIMYHVA 1455 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---------hhHHHhHHh
Confidence 765444445556777999999999987543 45799999999999999999999975443 1221111 0
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+. .|.+.. ..+.+-.+|++ +||+.||++|.++.|+++
T Consensus 1456 ~gh-----~Pq~P~-~ls~~g~dFle---~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1456 AGH-----KPQIPE-RLSSEGRDFLE---HCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ccC-----CCCCch-hhhHhHHHHHH---HHHhcCchhhhHHHHHHH
Confidence 000 011111 13344455555 999999999988887654
No 312
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.4e-35 Score=307.49 Aligned_cols=263 Identities=21% Similarity=0.265 Sum_probs=196.0
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK------ 373 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 373 (618)
..++|+..+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999994 57899999998643 23345677899999999999999999998644
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
...++||||+.+ +|.+.+.. .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 346999999964 88877743 278889999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccC-------HH
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS-------LV 526 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~-------l~ 526 (618)
+++....... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+........ ..
T Consensus 164 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T cd07850 164 LARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSD 238 (353)
T ss_pred cceeCCCCCC-----CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 9987643221 11233788999999999999999999999999999999999999754321100000 00
Q ss_pred HHH-------HHHhcC-C-----ccchhcccccc----CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 527 EWI-------TLLNTN-S-----SLETAIDKSLL----GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 527 ~~~-------~~~~~~-~-----~~~~~~d~~l~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
++. ...... . ...+.....+. ..........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 000000 0 00000000000 0001123456778888999999999999999985
No 313
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.7e-35 Score=291.17 Aligned_cols=250 Identities=25% Similarity=0.351 Sum_probs=202.1
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLLVY 380 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 380 (618)
+|+..+.||+|++|.||+|... +++.|++|++.... ...+.+.+|++.+++++|+||+++++.+... +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999965 78999999987654 3456789999999999999999999999988 8899999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 9999999999987553 589999999999999999999998 999999999999999999999999999987655
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... .......++..|+|||...+..++.++||||||+++|+|++|+.||..... .............
T Consensus 154 ~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~--- 221 (260)
T cd06606 154 IETG--EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-------PMAALYKIGSSGE--- 221 (260)
T ss_pred cccc--ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------hHHHHHhccccCC---
Confidence 4321 011123478899999999888899999999999999999999999976431 1111111110000
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...........+.+++.+|++.||++||++.|+++
T Consensus 222 ------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 222 ------PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ------CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 01111223456778888999999999999999975
No 314
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4e-35 Score=297.50 Aligned_cols=260 Identities=20% Similarity=0.202 Sum_probs=191.5
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCC-CCCccceeEEEEeC--CeeEEEEe
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAK--KERLLVYS 381 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~e 381 (618)
|++.+.||+|+||.||+|.. .+++.||+|+++... .......+|+..+.++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56778999999999999994 568999999987542 22334557888898885 99999999999987 88999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++ |+|.+.+.... ..+++..+..++.|++.||+|||+. +++||||||+||+++. +.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 997 48887776533 3589999999999999999999999 9999999999999999 99999999999876432
Q ss_pred CCcccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc-------cCHHHHHHHHh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK-------GSLVEWITLLN 533 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~-------~~l~~~~~~~~ 533 (618)
... ....++..|+|||+.. +..++.++|||||||++|||++|..||...+..+... .....|.....
T Consensus 153 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 153 PPY-----TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred CCc-----CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence 221 1123688999999754 4567889999999999999999999997543211100 00011110100
Q ss_pred cCCccchhccccccCC----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLLGN----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. .......+..... ........+.+++.+||+.+|++||+++++++
T Consensus 228 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 228 KS-RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cc-ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00 0000000000000 01123567888888999999999999999975
No 315
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.2e-35 Score=299.59 Aligned_cols=258 Identities=15% Similarity=0.184 Sum_probs=183.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC----CcEEEEEEeccCccC---H---------HHHHHHHHHHhcCCCCCccceeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG----GCFIMIKRLEDSQHS---E---------KEFLSEINTLGSVRHRNLVPLLGF 369 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~---~---------~~~~~E~~~l~~l~h~niv~l~~~ 369 (618)
++|.+.++||+|+||.||+|...+ +..+++|........ + .....+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 579999999999999999999644 456666654322111 0 112233445667789999999997
Q ss_pred EEeCC----eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC
Q 007088 370 CVAKK----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445 (618)
Q Consensus 370 ~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 445 (618)
+.... ..++++|++.. ++.+.+... ...++..+..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 66543 34678887744 555555432 2357888899999999999999999 999999999999999999
Q ss_pred ceEEcccCcccccCCCCCccc---ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc-
Q 007088 446 EPKLSDFGLARLMNPVDTHLS---TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF- 521 (618)
Q Consensus 446 ~~kl~DfG~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~- 521 (618)
.++|+|||+|+.......... .......||+.|+|||+..+..++.++|||||||++|||++|+.||.........
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 999999999987643221111 1112234899999999999999999999999999999999999999865321111
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
.....++...... ..+.. ....+.+.+++..|++.+|++||+++++.+.+
T Consensus 244 ~~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRLHE---------GKIKI---KNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHHHhhh---------hhhcc---CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0011111111111 11111 11235677778899999999999999999876
No 316
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.4e-35 Score=302.04 Aligned_cols=253 Identities=21% Similarity=0.296 Sum_probs=190.5
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|...+.||+|+||.||++.. .+++.||+|.+.... .....+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 445567899999999999995 468999999986533 34556889999999996 99999999999999999999999
Q ss_pred cCCCcccccc---CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 383 LENGTLYDKL---HPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gsL~~~l---~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
++. ++.++. .... ...+++..+..++.|++.||+|||+.. +++||||||+||+++.++.++|+|||+++...
T Consensus 85 ~~~-~l~~l~~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 85 MDI-SLDKFYKYVYEVL--KSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ccC-CHHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 864 554432 2211 145899999999999999999999732 89999999999999999999999999997654
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCC---CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTL---VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
..... ....|+..|+|||++.+. .++.++|||||||++|||++|+.||.... ...+.........
T Consensus 160 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~ 227 (288)
T cd06616 160 DSIAK-----TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVKGD 227 (288)
T ss_pred cCCcc-----ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcCCC
Confidence 32211 112378899999998765 68999999999999999999999986432 1111111111100
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+.+...........+.+++.+|++.||++|||++||++.
T Consensus 228 ------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 ------PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ------CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111111112234567788889999999999999999763
No 317
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.9e-35 Score=290.34 Aligned_cols=248 Identities=26% Similarity=0.351 Sum_probs=200.9
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCcc-CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQH-SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
+|+..+.||+|++|.||++... +++.+++|++..... ..+.+.+|++.+++++|+|++++++++...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4777899999999999999964 689999999976543 56778999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 81 GGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 999999987653 3589999999999999999999998 999999999999999999999999999987654332
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.....++..|+|||+..+..++.++||||||+++|+|++|+.||...... ........ ........
T Consensus 154 ----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~~- 219 (253)
T cd05122 154 ----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--------KALFKIAT-NGPPGLRN- 219 (253)
T ss_pred ----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--------HHHHHHHh-cCCCCcCc-
Confidence 11223788999999998888999999999999999999999998753211 11111110 00000000
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......+.+++.+|++.||++|||+.|+++
T Consensus 220 ------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 ------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ------ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0111356777888999999999999999975
No 318
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.4e-35 Score=301.59 Aligned_cols=248 Identities=26% Similarity=0.344 Sum_probs=194.4
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
|+..+.||+|+||.||+++. .++..||+|.+.... ...+.+.+|++++++++|+|++++++++.+++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 66688999999999999995 568999999986432 2235688999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++ +|.+.+.... .++++.++..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++.......
T Consensus 107 ~~g-~l~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (317)
T cd06635 107 CLG-SASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN 179 (317)
T ss_pred CCC-CHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCcc
Confidence 975 7777765433 3589999999999999999999999 99999999999999999999999999987544321
Q ss_pred CcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...++..|+|||++. +..++.++|||||||++|||++|+.||...... ...........
T Consensus 180 --------~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~-- 241 (317)
T cd06635 180 --------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNES-- 241 (317)
T ss_pred --------cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhccC--
Confidence 123788999999873 456889999999999999999999998653211 10111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
+.. ........+.+++.+|++.+|.+||++.++++.+-.+.
T Consensus 242 ----~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 242 ----PTL---QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ----CCC---CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 000 11123345677888999999999999999998655443
No 319
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=5e-35 Score=292.09 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=202.5
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||+|++|.||++... ++..|++|++.... ...+.+.+|++++++++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999954 68999999997543 3456788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999876543335699999999999999999999999 99999999999999999999999999998765432
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
.. .....+++.|+|||...+..++.++||||+|+++++|++|+.||..... .+........ ...
T Consensus 158 ~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~-~~~--- 221 (258)
T cd08215 158 DL----AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--------LELALKILKG-QYP--- 221 (258)
T ss_pred ce----ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--------HHHHHHHhcC-CCC---
Confidence 11 1223478899999999888899999999999999999999999865331 1111111111 000
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+ .......+.+++.+||..+|++||++.|+++
T Consensus 222 --~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 --PI----PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01 1122346677888999999999999999975
No 320
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.8e-35 Score=305.87 Aligned_cols=263 Identities=24% Similarity=0.322 Sum_probs=194.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----ee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-----ER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 376 (618)
+++|++.++||+|+||.||+|.. .+|+.||+|.+... ......+.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999984 57899999998642 233456788999999999999999999876543 57
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++|+||+++ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~-~l~~~~~~~-----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ-----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhccc-CHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 999999975 887777542 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.......... ......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||...+... ....+... ...
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~----~~~~~~~~-~~~ 228 (336)
T cd07849 155 IADPEHDHTG-FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH----QLNLILGV-LGT 228 (336)
T ss_pred eccccccccC-CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHH-cCC
Confidence 7543222111 1123457899999998654 568899999999999999999999996532110 00000000 000
Q ss_pred Cc---cchhcc-------ccccC--C-----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 536 SS---LETAID-------KSLLG--N-----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 536 ~~---~~~~~d-------~~l~~--~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.. .....+ ..... . ........+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 000000 00000 0 001123457788889999999999999999875
No 321
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.6e-34 Score=291.13 Aligned_cols=250 Identities=20% Similarity=0.225 Sum_probs=192.5
Q ss_pred HHHHHHhhccCCCCcEE--eecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 007088 298 LSDLMKATNSFSKNNII--GTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK 373 (618)
Q Consensus 298 ~~~l~~~~~~y~~~~~l--G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 373 (618)
..+.....++|++.+.+ |+|+||.||++.. .++..+|+|.+........ |+.....+ +||||+++++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecC
Confidence 34555566778887777 9999999999994 5688999999865432221 22222222 799999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-ceEEccc
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-EPKLSDF 452 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Df 452 (618)
+..++||||+++|+|.+++.... .+++..+..++.|+++||.|||+. +++||||||+||+++.++ .++|+||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 99999999999999999987543 589999999999999999999999 999999999999999998 9999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
|++........ ..++..|+|||++.+..++.++||||||+++|||++|+.||....... .....+....
T Consensus 155 g~~~~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~ 223 (267)
T PHA03390 155 GLCKIIGTPSC--------YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE---LDLESLLKRQ 223 (267)
T ss_pred ccceecCCCcc--------CCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch---hhHHHHHHhh
Confidence 99876543221 237889999999998899999999999999999999999997443211 1112222211
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-MFEVYQ 581 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 581 (618)
.... .........+.+++.+||+.||.+||+ ++|+++
T Consensus 224 ~~~~------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 QKKL------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cccC------------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1000 011123345677777999999999996 588863
No 322
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.6e-35 Score=297.64 Aligned_cols=262 Identities=24% Similarity=0.306 Sum_probs=195.8
Q ss_pred CCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEEEEe
Q 007088 308 FSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLLVYS 381 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e 381 (618)
|++.+.||+|++|.||+|+.. +++.+++|++.... .....+.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999964 58999999997652 3345688999999999999999999999988 78999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++ +|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||.+......
T Consensus 81 ~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 8888886543 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC--cc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS--SL 538 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~--~~ 538 (618)
... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .+.+......... ..
T Consensus 154 ~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 154 NSA---DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE-KIFELCGSPTDENWPGV 229 (287)
T ss_pred Ccc---cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCchhhcccc
Confidence 211 1112336788999997654 457899999999999999999999997544211100 0000000000000 00
Q ss_pred ch-----------hccccccCCCCHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ET-----------AIDKSLLGNGFDG-ELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~-----------~~d~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. .....+. +.... ....+.+++.+|++.+|.+||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLR-EFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccchhhhhccccccchhHHH-HHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00 0000000 00011 2567888999999999999999999975
No 323
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.6e-35 Score=303.45 Aligned_cols=262 Identities=29% Similarity=0.298 Sum_probs=193.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 378 (618)
.++|++.+.||+|+||.||+|.. .+|+.||+|.++... .....+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 46789999999999999999995 468999999986432 2233567899999999999999999998765 46799
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+.+ +|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 86 v~e~~~~-~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 8888776543 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc-CC
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT-NS 536 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~-~~ 536 (618)
....... ....++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+..+. +......... ..
T Consensus 159 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~----~~~~~~~~~~~~~ 230 (309)
T cd07845 159 GLPAKPM----TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ----LDLIIQLLGTPNE 230 (309)
T ss_pred CCccCCC----CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhcCCCCh
Confidence 5432111 11225778999998765 4578999999999999999999999975432111 0000000000 00
Q ss_pred cc----------chhccccccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SL----------ETAIDKSLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~----------~~~~d~~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. .....+...... .......+.+++.+|++.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 231 SIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 000000000000 0112445677888999999999999999985
No 324
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.3e-35 Score=304.48 Aligned_cols=264 Identities=21% Similarity=0.274 Sum_probs=197.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEe----CCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVA----KKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 376 (618)
.++|++.+.||+|++|.||+|.. .++..||+|++.... ...+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36789999999999999999994 568999999987532 334567889999999999999999998763 3467
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+. |+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ----PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 99999996 58988886543 389999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc-
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT- 534 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~- 534 (618)
.................++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.... + ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~----~-~~~~~~~g~ 230 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ----L-KLILSVLGS 230 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH----H-HHHHHHhCC
Confidence 664432222222223457889999998765 4688999999999999999999999975432110 0 00000000
Q ss_pred ----------CCccchhcccc-ccCC-----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 ----------NSSLETAIDKS-LLGN-----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ----------~~~~~~~~d~~-l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.....+..+.. .... ........+.+++.+||+.+|++||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 231 PSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred ChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000000000 0000 01123456788888999999999999999876
No 325
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.6e-35 Score=293.92 Aligned_cols=241 Identities=21% Similarity=0.215 Sum_probs=192.6
Q ss_pred EeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 314 IGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 314 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
||.|++|.||+++.. +++.|++|++.... ...+.+.+|+.++++++||||+++++++.+++..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999964 58999999986532 3346789999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 468 (618)
.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+.........
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~---- 149 (262)
T cd05572 81 WTILRDRG----LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKT---- 149 (262)
T ss_pred HHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccc----
Confidence 99997643 388999999999999999999999 9999999999999999999999999999876543211
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 469 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
....++..|+|||.+.+..++.++|+||+|+++|+|++|..||...... ..+.......... ..
T Consensus 150 -~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~---------~~ 213 (262)
T cd05572 150 -WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED------PMEIYNDILKGNG---------KL 213 (262)
T ss_pred -ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC------HHHHHHHHhccCC---------CC
Confidence 1123788999999998888999999999999999999999999764321 1111111111000 00
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
..+......+.+++.+||+.+|++||+ ++|+++
T Consensus 214 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 214 EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 111112456788888999999999999 566554
No 326
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2e-35 Score=301.99 Aligned_cols=262 Identities=23% Similarity=0.271 Sum_probs=193.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|+..+.||+|++|.||+|.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4688899999999999999995 468999999986532 234568899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-CCceEEcccCcccccCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLARLMNP 460 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~ 460 (618)
|++ ++|.+++..... ..+++..+..++.||+.||+|||++ +++||||||+||+++. ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 488877754432 3467888899999999999999999 9999999999999985 55799999999976543
Q ss_pred CCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC-C--
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN-S-- 536 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~-~-- 536 (618)
.... .....+++.|+|||++.+ ..++.++||||+|+++|+|+||+.||......+. +.......... .
T Consensus 156 ~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~----~~~~~~~~~~~~~~~ 227 (294)
T PLN00009 156 PVRT----FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE----LFKIFRILGTPNEET 227 (294)
T ss_pred Cccc----cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCChhh
Confidence 2111 112236789999998765 4578999999999999999999999975432111 11100000000 0
Q ss_pred -----ccchhcc--ccccCC----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 -----SLETAID--KSLLGN----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 -----~~~~~~d--~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+..... +..... ........+.+++.+|++.+|++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 228 WPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 000000 00112345677888999999999999999986
No 327
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.6e-35 Score=296.66 Aligned_cols=242 Identities=23% Similarity=0.262 Sum_probs=188.9
Q ss_pred EeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 314 IGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 314 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
||+|+||.||++.. .+|+.|++|.+.... .....+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999984 568999999986432 2344567899999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 468 (618)
.+++..... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~----- 150 (277)
T cd05577 81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK----- 150 (277)
T ss_pred HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc-----
Confidence 999875543 3589999999999999999999999 999999999999999999999999999876543111
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 469 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
.....++..|+|||+..+..++.++||||||+++|+|++|+.||....... .......... .. . .
T Consensus 151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~-~~------~----~ 215 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV----EKEELKRRTL-EM------A----V 215 (277)
T ss_pred cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc----cHHHHHhccc-cc------c----c
Confidence 112336789999999988889999999999999999999999997543211 0001000000 00 0 0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERH-----TMFEVY 580 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl 580 (618)
.........+.+++.+||+.||.+|| ++.+++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 252 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVR 252 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHH
Confidence 01111234566777799999999999 555554
No 328
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.2e-35 Score=303.75 Aligned_cols=267 Identities=22% Similarity=0.261 Sum_probs=193.6
Q ss_pred EEeec--CCeeEEEEEe-CCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 313 IIGTG--RTGATYIAML-PGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 313 ~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
.||+| +||+||++.. .+|+.||+|++..... ..+.+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999995 5799999999865332 2356889999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+...........
T Consensus 85 ~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 85 SANSLLKTYFP--EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 99998876533 3488999999999999999999999 999999999999999999999999986543322111100
Q ss_pred ---ccccCCCCcccccCCCCCCCC--CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH----------
Q 007088 467 ---TFVNGEFGDLGYVAPEYPRTL--VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL---------- 531 (618)
Q Consensus 467 ---~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~---------- 531 (618)
.......++..|+|||++.+. .++.++|||||||++|||++|+.||......+. .......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM----LLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH----HHHHhcCCCCCCccccc
Confidence 000111245679999998763 478999999999999999999999975432111 0000000
Q ss_pred ------Hh----------------cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHhh
Q 007088 532 ------LN----------------TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ--LLRAIA 587 (618)
Q Consensus 532 ------~~----------------~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 587 (618)
.. .........+..+...........+.+++.+||+.||++|||+.|+++ .++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 00 000000001111111112335567889999999999999999999974 444444
Q ss_pred h
Q 007088 588 E 588 (618)
Q Consensus 588 ~ 588 (618)
+
T Consensus 316 ~ 316 (328)
T cd08226 316 E 316 (328)
T ss_pred H
Confidence 4
No 329
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.6e-35 Score=297.32 Aligned_cols=263 Identities=21% Similarity=0.294 Sum_probs=195.5
Q ss_pred CCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCcc--CHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEeec
Q 007088 308 FSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQH--SEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
|++.+.||+|++|.||+|+.. +++.|++|++..... ......+|+..+.+++ |+||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999965 578999999865432 2334567999999999 999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
+|+|.+++..... ..+++..+..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 -~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRKG--KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred -CCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 7799988876542 3589999999999999999999999 999999999999999999999999999986643222
Q ss_pred cccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc--------CHHHHHHHHhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG--------SLVEWITLLNT 534 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~--------~l~~~~~~~~~ 534 (618)
. ....++..|+|||++. ...++.++|+||||++++||++|+.||......+.... .-..|......
T Consensus 155 ~-----~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 155 Y-----TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred c-----CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 1 1233788999999774 45678999999999999999999999965432111000 00011111100
Q ss_pred CCccchhccccc---cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSL---LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......+.... ...........+.+++.+|++.||++||+++|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000000 00001112356888888999999999999999875
No 330
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-36 Score=286.73 Aligned_cols=240 Identities=23% Similarity=0.275 Sum_probs=194.8
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|+..++||+|.||.|-+++ ...++.+|+|++++.. .....-..|-.+|+..+||.+..+.-.|...++.|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4678889999999999999999 5679999999998753 2233456788999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||..||.|+-+|...+ .+++.....+-..|+.||.|||++ +||.||||.+|.|+|.+|++||+|||+++.--
T Consensus 247 MeyanGGeLf~HLsrer----~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER----VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEccCceEeeehhhhh----cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 99999999999997654 489999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.... .....+||+.|.|||++....|+.+.|.|.+||++|||++|+.||...+....+.-++.+-++.
T Consensus 320 ~~g~----t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kF-------- 387 (516)
T KOG0690|consen 320 KYGD----TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKF-------- 387 (516)
T ss_pred cccc----eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccC--------
Confidence 2222 2334569999999999999999999999999999999999999998755432221111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH 574 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 574 (618)
....+.+.+.++. ..|..||.+|-
T Consensus 388 --------Pr~ls~eAktLLs---GLL~kdP~kRL 411 (516)
T KOG0690|consen 388 --------PRTLSPEAKTLLS---GLLKKDPKKRL 411 (516)
T ss_pred --------CccCCHHHHHHHH---HHhhcChHhhc
Confidence 1112344444444 88999999994
No 331
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.9e-35 Score=301.99 Aligned_cols=261 Identities=18% Similarity=0.189 Sum_probs=189.1
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCc
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGT 387 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 387 (618)
.+.+|.|+++.||++.. +++.||+|++... ....+.+.+|++++++++|+||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34445555555555544 7899999998654 2345678999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc---
Q 007088 388 LYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH--- 464 (618)
Q Consensus 388 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--- 464 (618)
|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.........
T Consensus 86 l~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 86 CEDLLKTHFP--EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 9999876433 3488999999999999999999999 9999999999999999999999999988755322111
Q ss_pred ccccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH----------
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL---------- 532 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~---------- 532 (618)
.........++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+.....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM----LLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhccCccccccCch
Confidence 1111122346778999998865 3578999999999999999999999976432111 00000000
Q ss_pred -hcCCccch----hccccc----cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 -NTNSSLET----AIDKSL----LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 -~~~~~~~~----~~d~~l----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
........ ..+... ..........++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00000000 000000 00011123356778888999999999999999986
No 332
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.7e-34 Score=286.37 Aligned_cols=246 Identities=26% Similarity=0.396 Sum_probs=199.3
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|+..+.||+|++|.||+++.. +++.|++|.+..... ..+.+.+|++++.+++|+|++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999854 678999999976543 456789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999998755 3489999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ....++..|+|||...+..++.++||||+|+++|+|++|+.||..... .......... ..
T Consensus 154 ~~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~--~~---- 216 (254)
T cd06627 154 KDD----ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-------MAALFRIVQD--DH---- 216 (254)
T ss_pred ccc----cccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHhcc--CC----
Confidence 221 123378899999998888889999999999999999999999875321 1111111000 00
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+ .......+.+++.+||..+|++||++.|++.
T Consensus 217 -~~~----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 -PPL----PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CCC----CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 001 1112345667777999999999999999874
No 333
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.4e-34 Score=290.99 Aligned_cols=250 Identities=21% Similarity=0.265 Sum_probs=192.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC------ccCHHHHHHHHHHHhcCCCCCccceeEEEEeC--Cee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS------QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 376 (618)
.+|++.+.||+|+||.||+|.. .++..|++|.+... ....+.+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999995 56899999987532 12235688999999999999999999998764 457
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++|+||+++++|.+++.... .+++.....++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG----ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 89999999999999986543 378999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
.......... ......++..|+|||++.+..++.++|||||||++||+++|+.||...... .... ......
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~-~~~~~~ 225 (264)
T cd06653 155 RIQTICMSGT-GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM-------AAIF-KIATQP 225 (264)
T ss_pred ccccccccCc-cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH-------HHHH-HHHcCC
Confidence 6543211111 111234788999999998888999999999999999999999999753211 1111 110000
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. ...+......+.+++.+|+. +|..||++.+++.
T Consensus 226 -~~--------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 -TK--------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -CC--------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 00 01112233456666669998 5799999998865
No 334
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=308.64 Aligned_cols=248 Identities=21% Similarity=0.314 Sum_probs=195.9
Q ss_pred CCCCcEEeecCCeeEEEEEeCC-CcEEEEEEecc-CccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 308 FSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLED-SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
|.++..||.|+||.||+|..++ +-..|-|++.. +....++|.-|+++|..++||+||++++.|+..+..|++.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4556789999999999999554 45567777753 445567899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|-....+-.-+ ..+.+.++..+++|++.||.|||++ +|||||||+.|||++-+|.++|+|||.+..........
T Consensus 114 GAVDaimlEL~---r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 114 GAVDAIMLELG---RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred chHhHHHHHhc---cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence 99988876554 4699999999999999999999999 99999999999999999999999999886543322222
Q ss_pred cccccCCCCcccccCCCCC-----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 466 STFVNGEFGDLGYVAPEYP-----RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
....||+.|||||+. ...+|+.++||||||++|.||..+.+|-...+. +.-.+ .... .....
T Consensus 188 ----DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-------MRVll-KiaK-SePPT 254 (1187)
T KOG0579|consen 188 ----DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLL-KIAK-SEPPT 254 (1187)
T ss_pred ----ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-------HHHHH-HHhh-cCCCc
Confidence 233499999999974 467899999999999999999999999765432 11111 1111 11111
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+. ++.....|.+++.+||..||..||++.++++
T Consensus 255 Llq-------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 LLQ-------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ccC-------cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 111 2334455666777999999999999999864
No 335
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.7e-34 Score=293.02 Aligned_cols=263 Identities=22% Similarity=0.248 Sum_probs=197.3
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
|++.+.||+|++|.||++.. .+++.+++|++..... ....+.+|++++++++|+||+++++++..++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56778999999999999995 4789999999865432 3567889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++ +|.+++.... ..+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred CC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 75 8888876543 3589999999999999999999999 999999999999999999999999999987654331
Q ss_pred cccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHH-------HHHHHhc-
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE-------WITLLNT- 534 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~-------~~~~~~~- 534 (618)
. .....++..|+|||...+. .++.++||||+|+++|+|++|+.||...+..+........ +......
T Consensus 154 ~----~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 154 P----YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred c----ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhh
Confidence 1 1122367889999988766 7899999999999999999999999654321110000000 0000000
Q ss_pred -CCccchhccccc--cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 -NSSLETAIDKSL--LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 -~~~~~~~~d~~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
............ ..........++.+++.+||+.||.+||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000000000 00011223567888899999999999999999975
No 336
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.3e-34 Score=294.51 Aligned_cols=259 Identities=23% Similarity=0.282 Sum_probs=193.8
Q ss_pred CCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcC---CCCCccceeEEEEeCCe-----
Q 007088 308 FSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSV---RHRNLVPLLGFCVAKKE----- 375 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 375 (618)
|++.+.||+|+||.||+|+.. +++.||+|+++... .....+.+|+.+++++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999965 48999999997432 2234566787777665 69999999999988776
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.+++|||+++ +|.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999975 88888765432 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
......... ....++..|+|||.+.+..++.++|||||||++|||++|++||......+ .+..........
T Consensus 155 ~~~~~~~~~-----~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~ 225 (287)
T cd07838 155 RIYSFEMAL-----TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD----QLDKIFDVIGLP 225 (287)
T ss_pred eeccCCccc-----ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH----HHHHHHHHcCCC
Confidence 876433221 12236788999999998899999999999999999999999987543221 111111111000
Q ss_pred Ccc---------chhcccccc---CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 536 SSL---------ETAIDKSLL---GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 536 ~~~---------~~~~d~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... ......... ..........+.+++.+||+.||.+||++.|++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 226 SEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred ChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000 000000000 0011223456778889999999999999999974
No 337
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.3e-35 Score=298.52 Aligned_cols=243 Identities=24% Similarity=0.378 Sum_probs=192.6
Q ss_pred CcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 311 NNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
..+||+|+||.||++.. .++..||+|.+.... .....+.+|+.++++++|+||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 35799999999999985 578999999886433 3455688999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 468 (618)
.+++... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+..........
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~--- 173 (292)
T cd06657 105 TDIVTHT-----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--- 173 (292)
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccc---
Confidence 9987532 378999999999999999999999 99999999999999999999999999887654322111
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 469 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
....++..|+|||+..+..++.++||||+|+++|||++|..||...... +........ ....+.
T Consensus 174 -~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--------~~~~~~~~~------~~~~~~- 237 (292)
T cd06657 174 -KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDN------LPPKLK- 237 (292)
T ss_pred -cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhh------CCcccC-
Confidence 1223788999999998888899999999999999999999998753221 111111100 000110
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
........+.+++.+||+.||.+||++.++++
T Consensus 238 -~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 238 -NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred -CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 01112335667777999999999999999987
No 338
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=292.54 Aligned_cols=247 Identities=24% Similarity=0.303 Sum_probs=201.3
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
+.|+.-++||+||||.||-+. ..+|+.||+|.+.+. ...+.-..+|-.+|.+++.+.||.+--.|.+.+..++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 568888999999999999998 567999999988543 234455678999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
..|.||+|.-+|...+. ..+++..+.-++.+|+.||++||+. +||.||+||+|||+|+.|+++|+|+|+|..+..
T Consensus 265 tlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999987765 5699999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
... ..+++||.+|||||++....|+...|.||+||++|||+.|+.||....... -.+-+.....
T Consensus 340 g~~-----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-----k~eEvdrr~~------ 403 (591)
T KOG0986|consen 340 GKP-----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-----KREEVDRRTL------ 403 (591)
T ss_pred CCc-----cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-----hHHHHHHHHh------
Confidence 443 344569999999999999999999999999999999999999997532210 0001111110
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMF 577 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 577 (618)
-|+.-..+.++++.+.+++ ..|+.||.+|--.+
T Consensus 404 -~~~~ey~~kFS~eakslc~---~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 404 -EDPEEYSDKFSEEAKSLCE---GLLTKDPEKRLGCR 436 (591)
T ss_pred -cchhhcccccCHHHHHHHH---HHHccCHHHhccCC
Confidence 0111122345666666666 78889999996544
No 339
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-35 Score=304.48 Aligned_cols=247 Identities=21% Similarity=0.285 Sum_probs=202.7
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
....|.+...||+|.|+.|.+|+ ..++..||||.+.++.. ....+.+|+++|+.++|||||+++.+.......|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 45678899999999999999999 45689999999987542 334588999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+.+|.+++++..... +.+..+..++.|+.+|++|+|++ .|+|||||++||||+.+.++||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~gr----~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR----MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEeccCchhHHHHHhccc----chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999987764 66688999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
... .....+|++.|.|||++.+.+| ++++|+||+|+++|-|+.|..||+...-.+.....
T Consensus 207 ~~~-----~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv-------------- 267 (596)
T KOG0586|consen 207 YGL-----MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV-------------- 267 (596)
T ss_pred ccc-----cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchh--------------
Confidence 432 2334569999999999998876 57999999999999999999999875433221111
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+...+.-. .....++-+++++++-.+|.+|++++++.+
T Consensus 268 ---l~gk~rIp--~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 268 ---LRGKYRIP--FYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ---eeeeeccc--ceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 01111100 111223445666999999999999999865
No 340
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.3e-34 Score=291.75 Aligned_cols=240 Identities=21% Similarity=0.238 Sum_probs=183.7
Q ss_pred EEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHH---HHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 313 IIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEIN---TLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.||+|+||.||++.. .+++.||+|.+.... .....+..|.. .++...||+|+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 389999999999985 568999999986532 11222344433 3445579999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 81 g~~L~~~l~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~- 152 (278)
T cd05606 81 GGDLHYHLSQH----GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (278)
T ss_pred CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-
Confidence 99999988644 3589999999999999999999999 999999999999999999999999999876543221
Q ss_pred ccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||........ .. ....... ..
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-----~~-~~~~~~~------~~ 215 (278)
T cd05606 153 -----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----HE-IDRMTLT------MA 215 (278)
T ss_pred -----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-----HH-HHHHhhc------cC
Confidence 123488999999998744 689999999999999999999999976432111 00 0000000 01
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
..+. ......+.+++.+|+..+|.+|| ++.|+++
T Consensus 216 ~~~~----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 216 VELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCCC----CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1111 11234677777799999999999 8888874
No 341
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.3e-34 Score=296.20 Aligned_cols=250 Identities=21% Similarity=0.332 Sum_probs=190.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC-CcEEEEEEeccCc--cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|++.+.||+|++|.||+|...+ ++.||||+++... ....++..|+.++.+.. |+||+++++++.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567888999999999999999754 8999999997543 23455677887777774 9999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
|+++ ++.+++.... ..+++..+..++.|++.||+|||+ . +|+||||+|+||++++++.+||+|||++.....
T Consensus 95 ~~~~-~l~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 95 LMST-CLDKLLKRIQ---GPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred ccCc-CHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 9854 6766654432 358999999999999999999997 5 899999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCC----CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLV----ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
.... ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+.........
T Consensus 168 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~ 235 (296)
T cd06618 168 SKAK-----TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEE 235 (296)
T ss_pred CCcc-----cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCC
Confidence 2221 1123678999999987554 788999999999999999999999642211 11111111110
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.. .+.. .......+.+++.+||+.||++||++.++++.
T Consensus 236 -~~-----~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 236 -PP-----SLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -CC-----CCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 0000 00123457778889999999999999999764
No 342
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-35 Score=306.63 Aligned_cols=270 Identities=23% Similarity=0.323 Sum_probs=206.5
Q ss_pred CCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------eeEE
Q 007088 308 FSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ERLL 378 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l 378 (618)
+...+.||+|+||.||+++ ...|+.||||.++.. ....+..-+|+++|++++|+|||+++++-.+.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3345789999999999999 678999999999763 345567789999999999999999999865543 5689
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC--CCC--ceEEcccCc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD--GDF--EPKLSDFGL 454 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~kl~DfG~ 454 (618)
|||||.+|||+..+...++ ...+++.+.+.++.+++.||.|||++ +|+||||||.||++- .+| .-||+|||.
T Consensus 95 vmEyC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEeecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999987653 46699999999999999999999999 999999999999983 333 479999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
|+.+++.. .+...+||..|.+||+... +.|+..+|.|||||++|+..||..||.....+..... ..|.....
T Consensus 171 Arel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~--~~~~~~tk 243 (732)
T KOG4250|consen 171 ARELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKE--IMWHIITK 243 (732)
T ss_pred cccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccch--hhhhhhcc
Confidence 99887654 2344569999999999984 8899999999999999999999999987554322111 12222221
Q ss_pred cCCccchhcccccc------------CCCCHHHHHHHHHHHhhccCCCCCCCC--CHHHHHHHHHHhhh
Q 007088 534 TNSSLETAIDKSLL------------GNGFDGELHQFLRVACNCVLPTPKERH--TMFEVYQLLRAIAE 588 (618)
Q Consensus 534 ~~~~~~~~~d~~l~------------~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~i~~ 588 (618)
......-..++... ..........+-+.+..+|..+|++|- ...+....+..|..
T Consensus 244 kp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 244 KPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred CCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 11111111111111 111234455666777788999999998 77777777777655
No 343
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.1e-34 Score=290.98 Aligned_cols=242 Identities=21% Similarity=0.214 Sum_probs=185.9
Q ss_pred cEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc----CHHHHHHHHHHH-hcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH----SEKEFLSEINTL-GSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|.. .+++.||+|.+..... ....+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4689999999999995 5689999999865421 122344555444 445899999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+++.....
T Consensus 82 ~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 150 (260)
T cd05611 82 GDCASLIKTLG----GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN---- 150 (260)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecccc----
Confidence 99999986543 488999999999999999999999 9999999999999999999999999998754321
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
....++..|+|||...+..++.++||||||+++|||++|..||...... .......... ..
T Consensus 151 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~-~~------ 211 (260)
T cd05611 151 ----KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--------AVFDNILSRR-IN------ 211 (260)
T ss_pred ----ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcc-cC------
Confidence 1123778999999998888899999999999999999999999653221 1111111100 00
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
............+.+++.+||+.||++||++.++.+.|
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 212 WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 00001112345677888899999999999877665544
No 344
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.9e-34 Score=295.78 Aligned_cols=263 Identities=25% Similarity=0.297 Sum_probs=195.5
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC----
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK---- 374 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 374 (618)
...++|++.+.||+|+||.||+|+.. +++.||+|+++... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999964 68899999996532 33456788999999999999999999987654
Q ss_pred ------eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceE
Q 007088 375 ------ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPK 448 (618)
Q Consensus 375 ------~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 448 (618)
..++|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL---VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 6767665432 3589999999999999999999999 999999999999999999999
Q ss_pred EcccCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHH
Q 007088 449 LSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE 527 (618)
Q Consensus 449 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~ 527 (618)
|+|||.+.......... .....++..|+|||.+.+ ..++.++|||||||++|||++|++||......+ .+..
T Consensus 157 l~dfg~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~----~~~~ 229 (302)
T cd07864 157 LADFGLARLYNSEESRP---YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA----QLEL 229 (302)
T ss_pred eCcccccccccCCcccc---cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH----HHHH
Confidence 99999998765432211 111235778999998754 457889999999999999999999997543211 1111
Q ss_pred HHHHHhcCCc---cchh--------ccc------cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 528 WITLLNTNSS---LETA--------IDK------SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 528 ~~~~~~~~~~---~~~~--------~d~------~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... ...... .... .+. .+. .........+.+++.+||+.||.+||++.++++
T Consensus 230 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 230 ISR-LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHH-HhCCCChhhcccccccccccccccccccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 000000 0000 000 000 001112356778888999999999999999875
No 345
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.9e-34 Score=296.78 Aligned_cols=245 Identities=27% Similarity=0.336 Sum_probs=191.5
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.|+..+.||+|++|.||+|+. .++..+++|.+.... ...+++.+|++++++++|+|++++++++...+..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 466678899999999999995 467899999886421 233567889999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+. |++.+.+.... .++++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 96 ~~~-~~l~~~~~~~~---~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 96 YCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred ccC-CCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 996 58877765433 3488999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
. ...++..|+|||.+. ...++.++|||||||++|||++|+.||...... ...........
T Consensus 169 ~--------~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~- 231 (308)
T cd06634 169 N--------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNES- 231 (308)
T ss_pred c--------cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--------HHHHHHhhcCC-
Confidence 1 123788999999864 356788999999999999999999998653211 11111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLL 583 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 583 (618)
+... .......+.+++.+||+.+|++||++.++++.-
T Consensus 232 -----~~~~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 232 -----PALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred -----CCcC---cccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0111 112334567778899999999999999998653
No 346
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1e-34 Score=291.06 Aligned_cols=249 Identities=19% Similarity=0.231 Sum_probs=192.8
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC------ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS------QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
+|.+.+.||+|+||.||+++.. .+..+++|.++.. .....++..|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5788899999999999999854 3445555655431 12334577899999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.........+++..++.++.|++.||.|||+. +++|+||||+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999988865333335699999999999999999999999 9999999999999975 569999999987654
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...... ....++..|+|||...+..++.++|+||||+++|+|++|..||.... ........... .
T Consensus 157 ~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~-~-- 221 (260)
T cd08222 157 GSCDLA----TTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN--------FLSVVLRIVEG-P-- 221 (260)
T ss_pred CCcccc----cCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHcC-C--
Confidence 322211 12237889999999888888999999999999999999999986422 11111111111 0
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+ .........+.+++.+|++.+|++||++.|+++
T Consensus 222 ---~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 ---TP----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---CC----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 00 112234457778888999999999999999975
No 347
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.5e-35 Score=291.82 Aligned_cols=247 Identities=23% Similarity=0.276 Sum_probs=193.0
Q ss_pred EeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 314 IGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 314 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
||+|+||.||++... +|+.|++|++.... ...+.+.+|++++++++|+||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999975 48999999997543 2445688999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc---
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL--- 465 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~--- 465 (618)
.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++..........
T Consensus 81 ~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENVG----SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 99987543 489999999999999999999999 99999999999999999999999999987643321100
Q ss_pred -cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 -STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 -~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
........++..|+|||...+..++.++||||||+++||+++|+.||..... .+........ ..
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~-~~------ 218 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP--------EEIFQNILNG-KI------ 218 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcC-Cc------
Confidence 0011223467899999998888889999999999999999999999975432 1111111110 00
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
...........+.+++.+|++.+|++|||+.++.+.|+
T Consensus 219 --~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 219 --EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred --CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00000002456677888999999999999966655544
No 348
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.5e-34 Score=294.46 Aligned_cols=254 Identities=23% Similarity=0.259 Sum_probs=197.0
Q ss_pred cCCCCcEEeecCCeeEEEEEe----CCCcEEEEEEeccCc-----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCee
Q 007088 307 SFSKNNIIGTGRTGATYIAML----PGGCFIMIKRLEDSQ-----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 376 (618)
+|++.+.||+|++|.||++.. .+++.||+|.++... ...+.+.+|++++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477789999999999999984 357889999986432 2345688999999999 599999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++.... .+++..+..++.|+++||.|||+. +++||||||+||+++.++.++|+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE----HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 99999999999999886543 488999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV--ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
.......... ....++..|+|||...+.. .+.++||||||+++|||++|..||...... ............
T Consensus 154 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~ 226 (288)
T cd05583 154 EFLAEEEERA---YSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ----NSQSEISRRILK 226 (288)
T ss_pred cccccccccc---ccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc----chHHHHHHHHHc
Confidence 6543322111 1223788999999987655 788999999999999999999999643221 111111111111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
.. .. ........+.+++.+||+.||++|||+.++.+.|+.
T Consensus 227 ~~-------~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 SK-------PP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cC-------CC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 10 00 111122456677779999999999999988777654
No 349
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.6e-34 Score=290.66 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=193.5
Q ss_pred cCCCCcEEeecCCeeEEEEEe----CCCcEEEEEEeccCc-----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCee
Q 007088 307 SFSKNNIIGTGRTGATYIAML----PGGCFIMIKRLEDSQ-----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 376 (618)
+|++.+.||+|+||.||++.. .+|..||+|+++... ...+.+.+|+.++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999985 468999999986532 2345678899999999 599999999999998899
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE----RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 99999999999999987543 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCC--CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL--VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
......... .....|+..|+|||...+. .++.++||||||+++|+|++|+.||...... ............
T Consensus 154 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~~~~~~~~~ 226 (290)
T cd05613 154 EFHEDEVER---AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK----NSQAEISRRILK 226 (290)
T ss_pred ecccccccc---cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc----ccHHHHHHHhhc
Confidence 654322111 1123478899999988653 4678999999999999999999999643221 112222222111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
... . ........+.+++.+|++.||++|| +++++++
T Consensus 227 ~~~-------~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 227 SEP-------P----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred cCC-------C----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 110 0 0111234566777799999999997 5666644
No 350
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.5e-34 Score=299.85 Aligned_cols=268 Identities=23% Similarity=0.311 Sum_probs=195.1
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC---ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeC--Cee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS---QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK--KER 376 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 376 (618)
..++|++.+.||+|+||.||+|... +++.||+|++... ......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888999999999999999964 6889999988542 23345577899999999 999999999998654 367
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999997 4998888653 478999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcc-cccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH------
Q 007088 457 LMNPVDTHL-STFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW------ 528 (618)
Q Consensus 457 ~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~------ 528 (618)
......... ........|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+.... +...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~-~~~~~~~~~~ 234 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEK-IIEVIGPPSA 234 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCCH
Confidence 664432210 011122347889999998754 5578899999999999999999999965432111000 0000
Q ss_pred --HHHHhcCCccchhccc----cc--cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 529 --ITLLNTNSSLETAIDK----SL--LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 529 --~~~~~~~~~~~~~~d~----~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
..... .......++. .. ...........+.+++.+|++.||++|||+.++++.
T Consensus 235 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIK-SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHH-hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000 0000000000 00 000011124567888889999999999999999873
No 351
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=279.16 Aligned_cols=253 Identities=20% Similarity=0.237 Sum_probs=197.9
Q ss_pred hhccCCCC-cEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeC----Cee
Q 007088 304 ATNSFSKN-NIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK----KER 376 (618)
Q Consensus 304 ~~~~y~~~-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~~ 376 (618)
.|++|++. ++||-|-.|.|-.+. ..+|+.+|+|++.++. ..++|+++.-.. .|||||.++++|.+. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 45666653 578999999999998 4578999999997765 345788776665 699999999998653 345
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---CCceEEcccC
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFG 453 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG 453 (618)
.+|||.|+||.|++.+++++. ..+.+.++-.|+.||+.|+.|||+. +|.||||||+|+|... +-.+||+|||
T Consensus 135 LiVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred EeeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccc
Confidence 799999999999999988775 6799999999999999999999999 9999999999999964 4569999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
+|+....... ....+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||+..... .....+......
T Consensus 210 FAK~t~~~~~-----L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~-aispgMk~rI~~-- 281 (400)
T KOG0604|consen 210 FAKETQEPGD-----LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-AISPGMKRRIRT-- 281 (400)
T ss_pred cccccCCCcc-----ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-cCChhHHhHhhc--
Confidence 9997653221 22334699999999999999999999999999999999999999865432 111122111111
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+. .+ ...+.++...+...++|+.+|+.+|.+|.|+.|+++
T Consensus 282 --gq-y~-----FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 282 --GQ-YE-----FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred --cC-cc-----CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 00 11 122234555666777888999999999999999975
No 352
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2e-34 Score=296.73 Aligned_cols=266 Identities=21% Similarity=0.252 Sum_probs=192.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 374 (618)
.++|++.++||+|+||.||+|.. .+++.|++|++.... .....+.+|++++++++|+||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 57899999999999999999995 468999999885432 22345778999999999999999999875543
Q ss_pred --eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 375 --ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 375 --~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
..++||||+.+ ++.+.+.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS---VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46899999975 6776665432 3599999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCccc-------ccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccC
Q 007088 453 GLARLMNPVDTHLS-------TFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS 524 (618)
Q Consensus 453 G~a~~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~ 524 (618)
|+++.......... .......+++.|+|||.+.+ ..++.++|||||||++|||++|++||.........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~--- 236 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL--- 236 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH---
Confidence 99986543221111 11112236788999998764 45789999999999999999999999754321110
Q ss_pred HHHHHHHHhcC--------Cccch----hccccccC---CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 525 LVEWITLLNTN--------SSLET----AIDKSLLG---NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 525 l~~~~~~~~~~--------~~~~~----~~d~~l~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......... ..... ........ .........+.+++.+|++.||++|||+.|++.
T Consensus 237 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 237 -HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred -HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000000 00000 00000000 001112256778888999999999999999874
No 353
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.7e-34 Score=299.53 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=196.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeC-----Ce
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-----KE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 375 (618)
.++|.+.+.||+|+||.||+++. .+++.||+|.+... ......+.+|+.++++++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45789999999999999999994 57899999998653 23345677899999999999999999988654 34
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.++||||+. ++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ----TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 68888886543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHH----
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWIT---- 530 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~---- 530 (618)
+........ .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+...... .+.....
T Consensus 156 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~ 230 (337)
T cd07858 156 RTTSEKGDF----MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLK-LITELLGSPSE 230 (337)
T ss_pred cccCCCccc----ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHH-HHHHHhCCCCh
Confidence 866433211 112337889999998754 468899999999999999999999996532110000 0000000
Q ss_pred ---HHhcCCccchhc-------cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHh
Q 007088 531 ---LLNTNSSLETAI-------DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL--LRAI 586 (618)
Q Consensus 531 ---~~~~~~~~~~~~-------d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 586 (618)
...........+ +.... .........+.+++.+||+.||++|||++|+++. ++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000000000000 00000 0011234567788889999999999999999876 5544
No 354
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=7.1e-34 Score=293.24 Aligned_cols=242 Identities=27% Similarity=0.357 Sum_probs=189.5
Q ss_pred CCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 308 FSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
|...+.||+|+||.||+|+. .++..|++|.+.... ...+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55677899999999999995 568999999986432 2234678899999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+. |++.+++.... .++++.++..++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 103 ~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~- 174 (313)
T cd06633 103 CL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA- 174 (313)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCC-
Confidence 96 57777775433 3589999999999999999999999 9999999999999999999999999988643221
Q ss_pred CcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
....|+..|+|||++. ...++.++|||||||++|||++|..||...... ...........
T Consensus 175 -------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~-- 237 (313)
T cd06633 175 -------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNDS-- 237 (313)
T ss_pred -------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHhcCC--
Confidence 1223788999999874 456888999999999999999999998754321 11111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.... ......+.+++.+||+.+|.+||++.+++.
T Consensus 238 ----~~~~~---~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 238 ----PTLQS---NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred ----CCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111 112234667777999999999999999985
No 355
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.8e-34 Score=297.12 Aligned_cols=266 Identities=20% Similarity=0.261 Sum_probs=196.3
Q ss_pred HHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEe-CC
Q 007088 300 DLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVA-KK 374 (618)
Q Consensus 300 ~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 374 (618)
++..++++|++.+.||+|+||.||++.. .+++.||+|++... ....+.+.+|++++++++||||+++++++.. .+
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 3445788999999999999999999984 47899999988542 2334678899999999999999999999876 45
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++|+||+ +++|.+++... ++++.....++.|+++||+|||+. +|+||||||+||+++.++.++|+|||.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR-----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccc
Confidence 788999998 56888887542 378888899999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc-------ccCHH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESF-------KGSLV 526 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~-------~~~l~ 526 (618)
+....... ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......... .....
T Consensus 155 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 155 ARIQDPQM-------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred ccccCCCc-------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 87543211 12236788999998765 56899999999999999999999999654321000 00000
Q ss_pred HHHHHHhcCCccchhccc-cccCCCC-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 527 EWITLLNTNSSLETAIDK-SLLGNGF-----DGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~-~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
++........ ..+.+.. ....... ......+.+++.+|++.+|++||++.+++..
T Consensus 228 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 228 DVINTICSEN-TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhccchh-hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111000000 0000000 0000000 1123567788889999999999999998754
No 356
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.8e-34 Score=296.24 Aligned_cols=264 Identities=21% Similarity=0.281 Sum_probs=192.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 374 (618)
.++|...+.||+|+||.||+|+. .+|+.||+|++.... .....+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 37899999999999999999995 578999999986532 23456789999999999999999999987543
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++|+||+.. +|.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 46899999964 6666542 2488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH-------H
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL-------V 526 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l-------~ 526 (618)
++...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||............+ .
T Consensus 164 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 164 ARHADAEM-------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred CcCCCCCC-------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 87653211 12236788999998765 468899999999999999999999997543211000000 0
Q ss_pred HHHHHHhcCCccchhcc--ccccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHh
Q 007088 527 EWITLLNTNSSLETAID--KSLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQL--LRAI 586 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d--~~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 586 (618)
.+..... .......+. +...... .......+.+++.+||+.||++||+++|++.. ++..
T Consensus 237 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 237 EFVQKLE-DKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHHHhc-ccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 0000000 000000000 0000000 01123457788889999999999999999853 5554
No 357
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1e-34 Score=294.01 Aligned_cols=250 Identities=22% Similarity=0.267 Sum_probs=199.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 379 (618)
++|...+.||+|++|.||+++. .+++.|++|++... ....+.+.+|.+++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4688899999999999999995 47899999998753 233466889999999998 99999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... .+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 99999999999997653 599999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCcc----------------cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc
Q 007088 460 PVDTHL----------------STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG 523 (618)
Q Consensus 460 ~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~ 523 (618)
...... ........++..|+|||...+..++.++||||||++++++++|+.||......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----- 228 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----- 228 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-----
Confidence 432110 01111234678999999988888999999999999999999999999754311
Q ss_pred CHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH----HHHHH
Q 007088 524 SLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM----FEVYQ 581 (618)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 581 (618)
.......... ..........+.+++.+||+.+|.+||++ +|+++
T Consensus 229 ---~~~~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 ---LTFQKILKLE-----------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHHHhcC-----------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0011111000 01111224567788889999999999999 66653
No 358
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.3e-34 Score=296.12 Aligned_cols=262 Identities=20% Similarity=0.266 Sum_probs=193.8
Q ss_pred HhhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC----
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK---- 374 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 374 (618)
...++|++.+.||+|+||.||++. ..++..||+|++.... ...+.+.+|++++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 356789999999999999999998 4578999999986432 23356789999999999999999999987653
Q ss_pred --eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 375 --ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 375 --~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
..++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 458999998 6789888753 2489999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccC-------
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS------- 524 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~------- 524 (618)
|++....... ....++..|+|||.+.+ ..++.++|+||+|+++|++++|+.||............
T Consensus 163 g~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd07880 163 GLARQTDSEM-------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTP 235 (343)
T ss_pred ccccccccCc-------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9998654321 12236889999998765 45889999999999999999999999754321100000
Q ss_pred HHHHHHHHhcCCccchhcc--ccccC----CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 525 LVEWITLLNTNSSLETAID--KSLLG----NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 525 l~~~~~~~~~~~~~~~~~d--~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...+....... ....... +.... .........+.+++.+|++.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 236 SKEFVQKLQSE-DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CHHHHHhhcch-hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00011100000 0000000 00000 000112345778888999999999999999984
No 359
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=274.98 Aligned_cols=245 Identities=20% Similarity=0.324 Sum_probs=189.5
Q ss_pred CcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 311 NNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
...||+|..|.||+++. ..|..+|||.+.... ...+++...++++.+-+ +|.||+.+|||..+...++.||.|..
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~- 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST- 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence 45799999999999995 568999999997654 44566788888876664 89999999999999999999999853
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
.++.++..-. .++++...-++...+.+||.||.++. +|+|||+||+|||+|+.|++|++|||++..+.+...+..
T Consensus 176 C~ekLlkrik---~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr 250 (391)
T KOG0983|consen 176 CAEKLLKRIK---GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR 250 (391)
T ss_pred HHHHHHHHhc---CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccccc
Confidence 4555554433 45888888899999999999999875 899999999999999999999999999988765544332
Q ss_pred ccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 467 TFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
..|-+.|||||.+. ..+|+.++||||||++++||.||+.||.....+ ...+ .....++ .
T Consensus 251 -----sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td---Fe~l----tkvln~e------P 312 (391)
T KOG0983|consen 251 -----SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD---FEVL----TKVLNEE------P 312 (391)
T ss_pred -----ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc---HHHH----HHHHhcC------C
Confidence 23789999999875 347889999999999999999999999864321 1111 1111111 1
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+.+.. .....|.+++..||..|+.+||...++++
T Consensus 313 P~L~~~~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 313 PLLPGHM--GFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCCCccc--CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 2222211 13345667777999999999999998875
No 360
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=9.2e-34 Score=296.39 Aligned_cols=266 Identities=21% Similarity=0.275 Sum_probs=196.9
Q ss_pred CHHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 007088 297 RLSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372 (618)
Q Consensus 297 ~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 372 (618)
...++..++++|++.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|+.++.+++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456777889999999999999999999984 578999999987532 234567889999999999999999998864
Q ss_pred C------CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc
Q 007088 373 K------KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446 (618)
Q Consensus 373 ~------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 446 (618)
. ...+++++++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 3 3467888876 77998877542 389999999999999999999999 9999999999999999999
Q ss_pred eEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH
Q 007088 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525 (618)
Q Consensus 447 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l 525 (618)
+||+|||+++...... ....++..|+|||...+ ..++.++|||||||++|||++|+.||....... .+
T Consensus 159 ~kl~dfg~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~----~~ 227 (345)
T cd07877 159 LKILDFGLARHTDDEM-------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID----QL 227 (345)
T ss_pred EEEecccccccccccc-------cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HH
Confidence 9999999987643211 12237889999998765 567889999999999999999999996533211 00
Q ss_pred HHHHHHHh----------cCCccchhcc--ccccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 526 VEWITLLN----------TNSSLETAID--KSLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 526 ~~~~~~~~----------~~~~~~~~~d--~~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
........ ........+. +...... .......+.+++.+|++.||.+||++.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 228 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00000000 0000000000 0000000 00123456788889999999999999999764
No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.8e-34 Score=292.56 Aligned_cols=261 Identities=23% Similarity=0.286 Sum_probs=196.7
Q ss_pred CCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 308 FSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
|+..+.||+|++|.||+|+.. +++.|++|.+... ....+.+.+|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999954 5899999999764 233467789999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
+ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 59999987653 3489999999999999999999999 999999999999999999999999999987644322
Q ss_pred cccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccC--------HHHHHHHHhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS--------LVEWITLLNT 534 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~--------l~~~~~~~~~ 534 (618)
.. ....++..|+|||.+.+. .++.++||||||+++||+++|+.||......+..... -..|.... .
T Consensus 154 ~~----~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 228 (282)
T cd07829 154 TY----THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVT-K 228 (282)
T ss_pred cc----CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhc-c
Confidence 11 122356789999988766 7899999999999999999999998754321110000 00000000 0
Q ss_pred CCccchhccccccC----CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLG----NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
........ +.... .........+.+++.+||+.||++||++.+++.
T Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 229 LPDYKPTF-PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccc-cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000000 00000 001112456888888999999999999999975
No 362
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.5e-34 Score=299.52 Aligned_cols=263 Identities=22% Similarity=0.228 Sum_probs=193.3
Q ss_pred ccCCC-CcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccC---------------HHHHHHHHHHHhcCCCCCccceeE
Q 007088 306 NSFSK-NNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHS---------------EKEFLSEINTLGSVRHRNLVPLLG 368 (618)
Q Consensus 306 ~~y~~-~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~h~niv~l~~ 368 (618)
++|.. .+.||+|+||.||+|.. .+++.||+|.+...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45653 56799999999999995 46899999998653211 124778999999999999999999
Q ss_pred EEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceE
Q 007088 369 FCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPK 448 (618)
Q Consensus 369 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 448 (618)
++...+..++||||++ |+|.+++.... .+++.....++.|++.||+|||+. +++||||||+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI----RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999997 58998886533 489999999999999999999999 999999999999999999999
Q ss_pred EcccCcccccCCCCCc----------ccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 449 LSDFGLARLMNPVDTH----------LSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 449 l~DfG~a~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
|+|||.+......... .........++..|+|||.+.+. .++.++|||||||++|||++|+.||...+.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999866521100 00111123367889999988764 468999999999999999999999976543
Q ss_pred CCccccCHHHHHHHHhcC--Cccchh------------ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 518 PESFKGSLVEWITLLNTN--SSLETA------------IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~--~~~~~~------------~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+. +.......... ...... ...... .........+.+++.+|++.+|++||+++|++.
T Consensus 240 ~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 240 IDQ----LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHH----HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 211 11100000000 000000 000000 001112456778888999999999999999985
No 363
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=8.7e-34 Score=295.11 Aligned_cols=266 Identities=19% Similarity=0.220 Sum_probs=190.6
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-C--CcEEEEEEeccCc---cCHHHHHHHHHHHhcC-CCCCccceeEEEEeC----Ce
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-G--GCFIMIKRLEDSQ---HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK----KE 375 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 375 (618)
+|++.+.||+|+||.||++... . +..||+|++.... ...+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999953 3 7899999986432 2345678899999999 599999999875432 35
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.++++||+. ++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ----PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 688899886 58988886543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccC-------HHH
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS-------LVE 527 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~-------l~~ 527 (618)
+.................|+..|+|||+..+ ..++.++||||+||++|++++|+.||...+........ ..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 8665432221111223458899999998765 56899999999999999999999998754321100000 000
Q ss_pred HHHHHhcCCccchh---ccc--cc-cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 528 WITLLNTNSSLETA---IDK--SL-LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 528 ~~~~~~~~~~~~~~---~d~--~l-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+....... ..... ... .. ...........+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 233 TLSRIGSP-KAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhhhhh-hHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 00000 000 00 00000112346778888999999999999999864
No 364
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.2e-35 Score=279.63 Aligned_cols=207 Identities=25% Similarity=0.330 Sum_probs=170.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC-----CcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEe-CCee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG-----GCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVA-KKER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 376 (618)
..|+....||+|.||.||+|...+ .+.+|+|.++... .......+|+.+++.++|||++.+..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 458889999999999999997322 3479999997653 122456789999999999999999999887 6678
Q ss_pred EEEEeecCCCccccccCCCCC-CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC----CceEEcc
Q 007088 377 LLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD----FEPKLSD 451 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~D 451 (618)
++++||.+. +|.+.++-.+. ....++...+..|+.||+.|+.|||+. =|+||||||.|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999988 89988865433 235688999999999999999999999 79999999999999877 8999999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
||+++.+...-.... .....+-|..|+|||.+.+ ..|+.+.||||.|||+.||+|-++.|.....
T Consensus 180 lGlaR~~~~plkpl~-s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~ 245 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLA-SLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREE 245 (438)
T ss_pred ccHHHHhhccccccc-cCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhh
Confidence 999998765432221 1233446899999998776 4689999999999999999999988876543
No 365
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.1e-33 Score=293.98 Aligned_cols=270 Identities=23% Similarity=0.296 Sum_probs=200.9
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eeE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-----ERL 377 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 377 (618)
+|++.+.||+|++|.||+|+.. ++..|++|++... ....+.+.+|++++++++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999964 5899999998753 234567899999999999999999999998775 789
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+++ +|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+..
T Consensus 81 lv~e~~~~-~l~~~l~~~~----~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQ----PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchhh-hHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 99999984 8988886543 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH----
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL---- 532 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~---- 532 (618)
....... ........++..|+|||++.+. .++.++||||||+++|+|++|+.||......+.... +.......
T Consensus 153 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~-i~~~~~~~~~~~ 230 (330)
T cd07834 153 VDPDEDE-KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNL-IVEVLGTPSEED 230 (330)
T ss_pred ecccccc-cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHH-HHHhcCCCChhH
Confidence 6543211 0111223478899999998877 789999999999999999999999976543211000 00000000
Q ss_pred ---hcCCccchhcccccc------CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHh
Q 007088 533 ---NTNSSLETAIDKSLL------GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL--LRAI 586 (618)
Q Consensus 533 ---~~~~~~~~~~d~~l~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 586 (618)
.........+..... ..........+.+++.+||+.+|.+||+++++++. ++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 000000000000000 00011134567788889999999999999999863 4443
No 366
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.3e-35 Score=319.35 Aligned_cols=257 Identities=24% Similarity=0.306 Sum_probs=188.2
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeC-----
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK----- 373 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 373 (618)
.+...+|+..+.||+||||.||+++. -||+.||||++.-. ......+.+|+..+.+|+|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 45677899999999999999999994 48999999999754 34455688999999999999999987633210
Q ss_pred --------------------------------------------------------------------------------
Q 007088 374 -------------------------------------------------------------------------------- 373 (618)
Q Consensus 374 -------------------------------------------------------------------------------- 373 (618)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHH
Q 007088 374 ----------------------------------KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA 419 (618)
Q Consensus 374 ----------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~ 419 (618)
...|+-||||+.-++.+++..+... -.....++++++|+.||+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLA 711 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHH
Confidence 0136778888886777776654321 135678999999999999
Q ss_pred HHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC----C----------CCCcccccccCCCCcccccCCCCCC
Q 007088 420 WLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN----P----------VDTHLSTFVNGEFGDLGYVAPEYPR 485 (618)
Q Consensus 420 ~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~----~----------~~~~~~~~~~~~~gt~~y~aPE~~~ 485 (618)
|+|++ |||||||||.||++|++..+||+|||+|+... . ..........+.+||.-|+|||++.
T Consensus 712 YIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99999 99999999999999999999999999998721 0 0011111233566999999999987
Q ss_pred CC---CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHH
Q 007088 486 TL---VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVA 562 (618)
Q Consensus 486 ~~---~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li 562 (618)
+. .|+.|+|+||+|||++||+. ||...-+ -......+. .+.+... ...+.+....=.+++
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME-------Ra~iL~~LR-~g~iP~~------~~f~~~~~~~e~slI 851 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME-------RASILTNLR-KGSIPEP------ADFFDPEHPEEASLI 851 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCchHH-------HHHHHHhcc-cCCCCCC------cccccccchHHHHHH
Confidence 65 49999999999999999985 5654221 111111111 1111111 112233444456677
Q ss_pred hhccCCCCCCCCCHHHHHH
Q 007088 563 CNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 563 ~~cl~~dP~~RPs~~evl~ 581 (618)
.++++.||.+|||+.|++.
T Consensus 852 ~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 852 RWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHhcCCCccCCCHHHHhh
Confidence 7999999999999999975
No 367
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.3e-34 Score=298.00 Aligned_cols=261 Identities=22% Similarity=0.295 Sum_probs=193.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe----
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE---- 375 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 375 (618)
..++|+..+.||+|++|.||+|.. .++..||+|++.... ...+.+.+|+.++++++|+||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 466899999999999999999996 468899999986532 233567789999999999999999998866554
Q ss_pred --eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 376 --RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 376 --~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 5699988864 2489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH-------
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL------- 525 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l------- 525 (618)
++....... ....++..|+|||...+ ..++.++||||||+++||+++|+.||......+......
T Consensus 164 ~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 236 (343)
T cd07851 164 LARHTDDEM-------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPD 236 (343)
T ss_pred ccccccccc-------cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Confidence 998654321 12236888999998754 467899999999999999999999997543211000000
Q ss_pred HHHHHHHhcCCccchhcccccc--CCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 526 VEWITLLNTNSSLETAIDKSLL--GNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~--~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+...... ......+..... ... .......+.+++.+||..||++|||+.|+++
T Consensus 237 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 237 EELLQKISS-ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHhhccc-hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000000000 000000000000 000 0112456788888999999999999999875
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.9e-34 Score=297.54 Aligned_cols=263 Identities=20% Similarity=0.281 Sum_probs=189.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeC----------
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK---------- 373 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---------- 373 (618)
.+|...+.||.|+||.||+|.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 6788999999999999999995 568999999886543 3456788999999999999999999876554
Q ss_pred ----CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC-CCCceE
Q 007088 374 ----KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD-GDFEPK 448 (618)
Q Consensus 374 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~k 448 (618)
...++||||++ ++|.+++... .+++..++.++.||+.||.|||+. +|+||||||+||+++ .++.+|
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG-----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence 35789999997 4888877532 488999999999999999999999 999999999999997 455789
Q ss_pred EcccCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH-
Q 007088 449 LSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV- 526 (618)
Q Consensus 449 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~- 526 (618)
++|||.++......... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+.....+.
T Consensus 156 l~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 156 IGDFGLARIVDPHYSHK-GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred ECCcccceecCCccccc-cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99999997654322111 11112246889999997644 5678899999999999999999999975432111000000
Q ss_pred -------HHHHHHhcCCccchhcc-ccccCCC-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 527 -------EWITLLNTNSSLETAID-KSLLGNG-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 527 -------~~~~~~~~~~~~~~~~d-~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+...... ...... ....... ......++.+++.+||..||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 235 VPVVREEDRNELLNV---IPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred cCCCChHHhhhhhhh---hhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000000 000000 0000000 0112345677888999999999999999975
No 369
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-34 Score=273.54 Aligned_cols=266 Identities=19% Similarity=0.293 Sum_probs=199.8
Q ss_pred CHHHHHHhhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCC-CCCccceeEEEEeC
Q 007088 297 RLSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAK 373 (618)
Q Consensus 297 ~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 373 (618)
+++|+.+-| .+.||+|+|+.|.-++ +.+|..||||++.+.. ..+.++.+|++++.+++ |+||++++++|+++
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 456777766 4789999999999988 7899999999997654 55678999999999995 99999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc---eEEc
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE---PKLS 450 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 450 (618)
...|+|||-|.||+|..+|+++. .+++.++.++.++|+.||.|||.+ ||.|||+||+|||-.+... +||+
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~----~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRK----HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhh----hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeee
Confidence 99999999999999999998765 499999999999999999999999 9999999999999975544 8999
Q ss_pred ccCcccccCCC--CC-cccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc
Q 007088 451 DFGLARLMNPV--DT-HLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522 (618)
Q Consensus 451 DfG~a~~~~~~--~~-~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~ 522 (618)
||.+..-+... -. -.+......+|+..|||||+.. ...|+.++|.||+|||+|-|+.|.+||...-..+-..
T Consensus 222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW 301 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW 301 (463)
T ss_pred ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence 99877543221 11 1111223456889999999643 3468899999999999999999999997644321110
Q ss_pred c--C-----HHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 523 G--S-----LVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 523 ~--~-----l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. . ........+ +...++.|+.+ .....+..+++...+..||.+|-++.+++.
T Consensus 302 drGe~Cr~CQ~~LFesIQ--EGkYeFPdkdW-----ahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESIQ--EGKYEFPDKDW-----AHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCCccHHHHHHHHHHHh--ccCCcCChhhh-----HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0 0 001111111 11122222221 222333445555788899999999998876
No 370
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=316.49 Aligned_cols=256 Identities=21% Similarity=0.222 Sum_probs=203.6
Q ss_pred HHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 007088 298 LSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372 (618)
Q Consensus 298 ~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 372 (618)
+.++.-..++|.+.++||+|+||.|..++. .+++.||+|++.+. .....-|..|-++|..-+.+-|+.++-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 345555678899999999999999999995 56899999999873 2445678999999999999999999999999
Q ss_pred CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 373 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
+++.|+|||||+||+|..++.... ++++..+..++..|+-||.-||+. |+|||||||+|||||..|++||+||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccc
Confidence 999999999999999999998765 489999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCC----C-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR----T-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE 527 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~ 527 (618)
|.+-.+...+.... ...+|||.|++||++. + +.|++.+|.||+||++|||+.|..||+.. .+++
T Consensus 220 GsClkm~~dG~V~s---~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad--------slve 288 (1317)
T KOG0612|consen 220 GSCLKMDADGTVRS---SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD--------SLVE 288 (1317)
T ss_pred hhHHhcCCCCcEEe---ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH--------HHHH
Confidence 99988875443322 2346999999999865 3 67899999999999999999999999864 3344
Q ss_pred HHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC---HHHH
Q 007088 528 WITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT---MFEV 579 (618)
Q Consensus 528 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ev 579 (618)
-............+.+. ...+++.+.+++ +.+ -+|+.|-. ++++
T Consensus 289 TY~KIm~hk~~l~FP~~----~~VSeeakdLI~---~ll-~~~e~RLgrngiedi 335 (1317)
T KOG0612|consen 289 TYGKIMNHKESLSFPDE----TDVSEEAKDLIE---ALL-CDREVRLGRNGIEDI 335 (1317)
T ss_pred HHHHHhchhhhcCCCcc----cccCHHHHHHHH---HHh-cChhhhcccccHHHH
Confidence 33333333222222211 113445555444 433 57888877 5554
No 371
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-35 Score=286.26 Aligned_cols=264 Identities=20% Similarity=0.209 Sum_probs=205.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCC--C----CccceeEEEEeCCeeE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH--R----NLVPLLGFCVAKKERL 377 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--~----niv~l~~~~~~~~~~~ 377 (618)
+++|.+...+|+|.||.|-.+.. ..+..||+|+++.-....+.-.-|+++++++.+ | -+|.+.++|.-.++.|
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 78899999999999999999984 447999999998877777777889999999942 2 3788889999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC--------------
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-------------- 443 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------------- 443 (618)
+|+|.+ |-|+.+++..+.. .+++...+..|+.|++++++|||+. +++|-||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y--~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNY--IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEecc-ChhHHHHhccCCc--cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccc
Confidence 999988 5599999987665 6799999999999999999999999 9999999999999932
Q ss_pred ------CCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 444 ------DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 444 ------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
+..++|+|||.|+...+... . .+.|..|+|||++.+-.++.++||||+||||+|+.||...|+..++
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~hs---~----iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHHS---T----IVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCcc---e----eeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 23589999999987654332 2 2268999999999999999999999999999999999999988765
Q ss_pred CCccc---cCH---------HHHHHHHhcCCcc-----------chhccccc----cCCCCHHHHHHHHHHHhhccCCCC
Q 007088 518 PESFK---GSL---------VEWITLLNTNSSL-----------ETAIDKSL----LGNGFDGELHQFLRVACNCVLPTP 570 (618)
Q Consensus 518 ~~~~~---~~l---------~~~~~~~~~~~~~-----------~~~~d~~l----~~~~~~~~~~~l~~li~~cl~~dP 570 (618)
.+... .++ ..........+.+ ..+.+... .....+.+..+|++|+.+||..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 43210 000 0000000000000 00011000 011245677889999999999999
Q ss_pred CCCCCHHHHHH
Q 007088 571 KERHTMFEVYQ 581 (618)
Q Consensus 571 ~~RPs~~evl~ 581 (618)
.+|+|+.|++.
T Consensus 395 ~~RiTl~EAL~ 405 (415)
T KOG0671|consen 395 ARRITLREALS 405 (415)
T ss_pred cccccHHHHhc
Confidence 99999999975
No 372
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=310.62 Aligned_cols=263 Identities=24% Similarity=0.355 Sum_probs=207.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC--------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP--------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK 373 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 373 (618)
.++..+.+.||+|.||.|++|... ....||||.++... ...+.+..|+++|+.+ +|+||+.++|+|...
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 344455669999999999999832 14679999998644 3467799999999999 699999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCC---C-------CC--cCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 374 KERLLVYSYLENGTLYDKLHPAE---H-------EV--MHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~---~-------~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
+..++|+||+..|+|.++++..+ . .. ..++....+.++.|||.|++||++. +++||||-++|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEe
Confidence 99999999999999999998766 0 01 2388899999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPES 520 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~ 520 (618)
.++..+||+|||+|+..............+. -...|||||.+....|+.|+|||||||+|||++| |..||.....
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--- 527 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--- 527 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc---
Confidence 9999999999999997654433322211111 2456999999999999999999999999999999 8888864211
Q ss_pred cccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 521 FKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 521 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
...+.+++ ....+.+.+..+..++.++++.||+.+|++||++.|+.+.++....
T Consensus 528 -~~~l~~~l-------------~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 528 -TEELLEFL-------------KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred -HHHHHHHH-------------hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 01111111 1111222334456678889999999999999999999999998654
No 373
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=6.7e-33 Score=275.91 Aligned_cols=235 Identities=24% Similarity=0.270 Sum_probs=189.5
Q ss_pred EeecCCeeEEEEEeC-CCcEEEEEEeccCcc----CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 314 IGTGRTGATYIAMLP-GGCFIMIKRLEDSQH----SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 314 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
||+|+||.||++... +++.+++|++..... ....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999964 589999999875432 345788999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTF 468 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 468 (618)
.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+.........
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~---- 149 (250)
T cd05123 81 FSHLSKEG----RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR---- 149 (250)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCc----
Confidence 99987553 489999999999999999999998 9999999999999999999999999999775443211
Q ss_pred ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 469 VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 469 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
.....++..|+|||...+...+.++|+||||+++|++++|+.||...+. .......... . .
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~-~--------~-- 210 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILKD-P--------L-- 210 (250)
T ss_pred ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhcC-C--------C--
Confidence 1223378899999999888889999999999999999999999965332 1111111110 0 0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHTMFE 578 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 578 (618)
.........+.+++.+|+..||++||++.+
T Consensus 211 ~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 211 RFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 011112356677888999999999999954
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-33 Score=297.80 Aligned_cols=259 Identities=23% Similarity=0.337 Sum_probs=212.8
Q ss_pred HHHHHHhhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEe---
Q 007088 298 LSDLMKATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVA--- 372 (618)
Q Consensus 298 ~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~--- 372 (618)
++.+..-++.|++.+.||.|.+|.||+++ .++++.+|+|++......++++..|.++++.. .|||++.+++++..
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 44444567789999999999999999999 67899999999988888888899999999888 69999999999864
Q ss_pred --CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEc
Q 007088 373 --KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450 (618)
Q Consensus 373 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 450 (618)
+++.|||||||.+||..|+++... ...+.|..+..|++.++.|+.+||.. .++|||||-.|||++.++.+||+
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEe
Confidence 468999999999999999998765 36799999999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l 525 (618)
|||.+..++.......+ ..||+.|||||++.- ..|+..+|+||+|++..||--|.+|+.+.-+...
T Consensus 166 DFGvSaQldsT~grRnT----~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra----- 236 (953)
T KOG0587|consen 166 DFGVSAQLDSTVGRRNT----FIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA----- 236 (953)
T ss_pred eeeeeeeeecccccccC----cCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-----
Confidence 99999887654433333 349999999998753 3467899999999999999999999876432110
Q ss_pred HHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+. +.. .+......+....++|.++|..||..|.++||++.++++
T Consensus 237 -----LF~----IpR--NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 -----LFL----IPR--NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred -----hcc----CCC--CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 000 001 111222234566788888889999999999999988764
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6.2e-33 Score=312.51 Aligned_cols=144 Identities=23% Similarity=0.333 Sum_probs=130.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|.+.++||+|+||.||+|... +++.||+|+++... .....+..|+.++..++|+||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999964 68999999997532 22356889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
||+++++|.+++.... .+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~----~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG----YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999986543 488899999999999999999999 99999999999999999999999999986
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=7.4e-33 Score=273.81 Aligned_cols=222 Identities=23% Similarity=0.202 Sum_probs=175.1
Q ss_pred cCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCccccccCCC
Q 007088 317 GRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPA 395 (618)
Q Consensus 317 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~ 395 (618)
|.+|.||++.. .+++.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 88999999994 578999999997643 2334555555667999999999999999999999999999999988654
Q ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCc
Q 007088 396 EHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475 (618)
Q Consensus 396 ~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt 475 (618)
. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+....... ....++
T Consensus 80 ~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-------~~~~~~ 145 (237)
T cd05576 80 L----NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-------DGEAVE 145 (237)
T ss_pred c----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc-------ccCCcC
Confidence 3 489999999999999999999999 99999999999999999999999999886654321 112256
Q ss_pred ccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHH
Q 007088 476 LGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGEL 555 (618)
Q Consensus 476 ~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 555 (618)
..|+|||...+..++.++||||+|+++|||++|+.|+....... ... ....+ +....
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------~~~------~~~~~----~~~~~ 202 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------NTH------TTLNI----PEWVS 202 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------ccc------cccCC----cccCC
Confidence 78999999988889999999999999999999998875321100 000 00001 11122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHH
Q 007088 556 HQFLRVACNCVLPTPKERHTMFEV 579 (618)
Q Consensus 556 ~~l~~li~~cl~~dP~~RPs~~ev 579 (618)
..+.+++.+|++.||++||++.+.
T Consensus 203 ~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 203 EEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHHHHHHHHccCCHHHhcCCCcc
Confidence 456677779999999999997433
No 377
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-34 Score=268.37 Aligned_cols=268 Identities=21% Similarity=0.299 Sum_probs=194.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEecc---CccCHHHHHHHHHHHhcCCCCCccceeEEEEeC--------
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLED---SQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-------- 373 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 373 (618)
+.|....+||+|.||.||+|+. ++|+.||+|+.-- ...-.....+|+++|..++|+|++.+++.|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 3466678999999999999994 5578888886522 112234567899999999999999999887542
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
...|+||.+|+. +|..++.... ..++..++.+++.++..||.|+|+. .|+|||+||.|+||+.+|.+||+|||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~---vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK---VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc---ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 247999999987 8999887654 4589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
+++.+.............++-|..|++||.+.+ ..|+++.|||.-|||+.||.||.+-++...+..... .+.......
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~-~Is~LcGs~ 248 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLH-LISQLCGSI 248 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHH-HHHHHhccC
Confidence 998776554444333445567999999998765 579999999999999999999998887654321110 001100000
Q ss_pred hcCC-------ccchhcccc-ccCC---CCHHHHH------HHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTNS-------SLETAIDKS-LLGN---GFDGELH------QFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~~-------~~~~~~d~~-l~~~---~~~~~~~------~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+- .+.+.+... +... ...+..+ ..++|+..++..||.+|+++++++.
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 0000 001111000 1000 0111122 4566777999999999999999875
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=292.89 Aligned_cols=240 Identities=23% Similarity=0.245 Sum_probs=190.8
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEe
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++.|.....+|.|+|+.|-.+. ..+++..++|++.+.. .+..+|+.++.+. +||||+++.+.+.+..+.|+|||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 36778888899999999999988 5678899999997652 2334677666665 79999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee-CCCCceEEcccCcccccCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL-DGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~DfG~a~~~~~ 460 (618)
++.+|-+.+.+..... .. .++..|+.+|+.|+.|||++ |++||||||+|||+ ++.++++|+|||.++....
T Consensus 397 ~l~g~ell~ri~~~~~----~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE----FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred hccccHHHHHHHhcch----hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 9999988887765442 23 67778999999999999999 99999999999999 6999999999999998765
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
. ..+.+-|..|.|||+.....|++++|+||||++||+|++|+.||...... .+..... .....
T Consensus 469 ~-------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i-~~~~~-- 531 (612)
T KOG0603|consen 469 S-------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRI-QMPKF-- 531 (612)
T ss_pred h-------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhh-cCCcc--
Confidence 4 12223578999999999999999999999999999999999999865432 1111111 00000
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....+++.+++++ +||+.||.+||+|.++..
T Consensus 532 -------s~~vS~~AKdLl~---~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 532 -------SECVSDEAKDLLQ---QLLQVDPALRLGADEIGA 562 (612)
T ss_pred -------ccccCHHHHHHHH---HhccCChhhCcChhhhcc
Confidence 0223445555554 999999999999999964
No 379
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=278.15 Aligned_cols=239 Identities=21% Similarity=0.272 Sum_probs=189.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 379 (618)
.+|....+||+|+||.|.+|..+ +.+.+|||+++++. .+.+--..|-++|.-- +-|.++++..+|...+..|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888999999999999999854 46889999998753 1222234565666554 578899999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+.||+|.-++++.+. +.++.+.-+|..||-||-+||++ ||+.||||.+|||+|.+|++||+|||+++.--
T Consensus 429 MEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999999887654 88888999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
..... ....+||+.|+|||++..++|+..+|.|||||+||||+.|++||+..++.+.+..+...
T Consensus 502 ~~~~T----TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------------ 565 (683)
T KOG0696|consen 502 FDGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------------ 565 (683)
T ss_pred cCCcc----eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc------------
Confidence 33322 23456999999999999999999999999999999999999999986654322111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH 574 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 574 (618)
.. .++....++...+....+...|.+|-
T Consensus 566 -----nv--syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 566 -----NV--SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -----cC--cCcccccHHHHHHHHHHhhcCCcccc
Confidence 00 11122233445555588889999994
No 380
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-34 Score=269.93 Aligned_cols=251 Identities=21% Similarity=0.298 Sum_probs=188.2
Q ss_pred CcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 311 NNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
...||.|+||+|+|.. .+.|+..|||+++... ...++++.|.+...+- +.||||+++|.+..++..|+-||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 4569999999999998 5679999999997643 5567788888876555 799999999999999999999999964
Q ss_pred ccccccCCC-CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 387 TLYDKLHPA-EHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 387 sL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
||..+-..- ......+++...-+|....+.||.||.+.. .|||||+||+|||+|..|.+||+|||++..+..+-.
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA-- 223 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA-- 223 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHHH--
Confidence 665432210 011245888888889999999999998764 899999999999999999999999999977654221
Q ss_pred cccccCCCCcccccCCCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 466 STFVNGEFGDLGYVAPEYPR--TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.....|-..|||||.+. +..|+.+|||||+|++|||+.||+.|+...+ .+-+.+..........-..+
T Consensus 224 ---kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-------svfeql~~Vv~gdpp~l~~~ 293 (361)
T KOG1006|consen 224 ---KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-------SVFEQLCQVVIGDPPILLFD 293 (361)
T ss_pred ---hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-------HHHHHHHHHHcCCCCeecCc
Confidence 11234778999999875 3358899999999999999999999986432 22222333222221111111
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...-+....+.+++..|+..|-.+||...++.+
T Consensus 294 -----~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 294 -----KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred -----ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111224456777777999999999999998865
No 381
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=7.2e-33 Score=244.08 Aligned_cols=260 Identities=21% Similarity=0.265 Sum_probs=193.3
Q ss_pred cCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|...++||+|.||+||+|+ .++++.||+|+.+-+. .......+|+-+++.++|.|||+++++...++..-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 56778899999999999999 5678999999986543 2345678999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
|.. +|..+..... ..++.+....++.|+++||.+.|++ ++.|||+||.|.+|+.+|+.|++|||+++-++-.-
T Consensus 83 cdq-dlkkyfdsln---g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLN---GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHHhcC---CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 975 8888876554 3588999999999999999999999 99999999999999999999999999999876433
Q ss_pred CcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHh---cCCc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLN---TNSS 537 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~---~~~~ 537 (618)
.... ..+-|..|++|.++.+. -|+...|+||-|||+.|+.. |++.|...+- ...+....+..- ++.+
T Consensus 156 rcys----aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv----ddqlkrif~~lg~p~ed~w 227 (292)
T KOG0662|consen 156 RCYS----AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQLKRIFRLLGTPTEDQW 227 (292)
T ss_pred Eeee----ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH----HHHHHHHHHHhCCCccccC
Confidence 2222 22358999999988765 58899999999999999987 6665654332 122222222211 1111
Q ss_pred --cchhccccccCCC-----CHHHHH----HHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 --LETAIDKSLLGNG-----FDGELH----QFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 --~~~~~d~~l~~~~-----~~~~~~----~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+....|-....-+ ++.... .=.+++.+.+.-+|.+|.++++.++
T Consensus 228 ps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 228 PSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 1111111111111 111111 1234555888899999999988765
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.1e-31 Score=295.10 Aligned_cols=265 Identities=18% Similarity=0.174 Sum_probs=168.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-C----CcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEE------EEe
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-G----GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGF------CVA 372 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~~ 372 (618)
..++|+..+.||+|+||.||+|+.. + +..||+|++......+. ...| .+....+.+++.++.. ...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~-~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEI-WMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHH-HHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 4678999999999999999999964 4 68999998865332211 1111 1122222333322221 234
Q ss_pred CCeeEEEEeecCCCccccccCCCCCC----------------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCC
Q 007088 373 KKERLLVYSYLENGTLYDKLHPAEHE----------------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436 (618)
Q Consensus 373 ~~~~~lV~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 436 (618)
..+.++||||+++++|.+++...... ........+..++.|++.||+|||++ +|+||||||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP 283 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKP 283 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCH
Confidence 56789999999999999988654210 01112344668999999999999999 999999999
Q ss_pred CCeeeCC-CCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC----------------------CCCCcc
Q 007088 437 KCILLDG-DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL----------------------VATPKG 493 (618)
Q Consensus 437 ~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~s 493 (618)
+|||++. ++.+||+|||+|+.+....... .....+++.|+|||.+... .++.++
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~---~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYI---PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccC---CcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999985 5799999999998654322211 1223478999999954321 234567
Q ss_pred chHHHHHHHHHHHhCCCCCCCCCCC-----CccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCC
Q 007088 494 DVYSFGVVLLELITGERPTHLTNAP-----ESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLP 568 (618)
Q Consensus 494 DVwS~Gvil~elltG~~Pf~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~ 568 (618)
|||||||++|||+++..|+...... .........|......... .+ +... .+..+.......+|+.+||+.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRAS-PD-LRRG--FEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccc-hh-hhhh--hhhccccchHHHHHHHHHccC
Confidence 9999999999999977664321000 0001112233222111100 00 0000 000011122345788899999
Q ss_pred CCCCCCCHHHHHH
Q 007088 569 TPKERHTMFEVYQ 581 (618)
Q Consensus 569 dP~~RPs~~evl~ 581 (618)
||++|||++|+++
T Consensus 437 dP~kR~ta~e~L~ 449 (566)
T PLN03225 437 KGRQRISAKAALA 449 (566)
T ss_pred CcccCCCHHHHhC
Confidence 9999999999976
No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=272.80 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=194.0
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccC--------HHHHHHHHHHHhcCCCCCccceeEEEEeC-Ce
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHS--------EKEFLSEINTLGSVRHRNLVPLLGFCVAK-KE 375 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~ 375 (618)
++|-..++||+|||+.||+|. +...+.||+|+-...... .+...+|..+.+.+.||.||++|+||.-+ +.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 356677899999999999999 667899999987533221 23456899999999999999999999654 56
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC---CCCceEEccc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD---GDFEPKLSDF 452 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Df 452 (618)
+|-|+|||+|.+|.-||+..+. +++.++..|+.||+.||.||.+. +|+|||-||||.|||+- ..|.+||.||
T Consensus 543 FCTVLEYceGNDLDFYLKQhkl----mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKL----MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhh----hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 7899999999999999987754 89999999999999999999986 67899999999999994 4578999999
Q ss_pred CcccccCCCCCccc---ccccCCCCcccccCCCCCCC----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH
Q 007088 453 GLARLMNPVDTHLS---TFVNGEFGDLGYVAPEYPRT----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525 (618)
Q Consensus 453 G~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l 525 (618)
|+++.++....... .......||++|++||.+-- .+.+.|+||||.|||+|..+.|+.||....... ++
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ----dI 693 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ----DI 693 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH----HH
Confidence 99999876443211 11223459999999997643 356889999999999999999999997643211 11
Q ss_pred HHHHHHHhcCCccchhcccccc-CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 526 VEWITLLNTNSSLETAIDKSLL-GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+.-..+ ..-.-... ....+.+.+.|++ +||++.-++|....++..
T Consensus 694 LqeNTIl-------kAtEVqFP~KPvVsseAkaFIR---RCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 694 LQENTIL-------KATEVQFPPKPVVSSEAKAFIR---RCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred Hhhhchh-------cceeccCCCCCccCHHHHHHHH---HHHHhhhhhhhhHHHHcc
Confidence 1111100 00000010 1123445555555 999999999998888753
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-33 Score=279.99 Aligned_cols=263 Identities=20% Similarity=0.290 Sum_probs=203.4
Q ss_pred CcEEeecCCeeEEEEE-eCCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 311 NNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
.+.||+|.||+||-|+ .++|+.||||++.+. ...+.++++|+.+|++++||.||.+...|+..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 5789999999999999 568999999999663 34567899999999999999999999999999999999999965
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC---CceEEcccCcccccCCCCC
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD---FEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfG~a~~~~~~~~ 463 (618)
+..+.+-..+. ..+++.....++.||+.||.|||.+ +|+|+||||+|||+... -++||+|||+|+.++...-
T Consensus 648 DMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF 722 (888)
T KOG4236|consen 648 DMLEMILSSEK--GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF 722 (888)
T ss_pred hHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence 65555544333 4689999999999999999999999 99999999999999643 4699999999999875432
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
-+..+||+.|.|||++..+.|...-|+||.|||+|--++|..||..+.+ +.+..+. ..++-
T Consensus 723 -----RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-------IndQIQN-------AaFMy 783 (888)
T KOG4236|consen 723 -----RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-------INDQIQN-------AAFMY 783 (888)
T ss_pred -----hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-------hhHHhhc-------ccccc
Confidence 2345699999999999999999999999999999999999999976432 1111111 00111
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHH-----------HHHHH----hhhhcCCCCCCcccCC
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVY-----------QLLRA----IAERYHFTTDDEIMLP 601 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-----------~~L~~----i~~~~~~~~~~~~~~~ 601 (618)
....+.+.....+++|...|+..-++|-+.++-+ ..|++ +-++|-+.+.|+.-|+
T Consensus 784 ---Pp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRelE~~igeRyiThesDD~~~~ 853 (888)
T KOG4236|consen 784 ---PPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLRELEVRIGERYITHESDDARWE 853 (888)
T ss_pred ---CCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHHHHHhhCcceecCcchhhhhh
Confidence 1122344455667777788888888888876543 22333 3455666666655554
No 385
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3e-33 Score=281.46 Aligned_cols=239 Identities=21% Similarity=0.224 Sum_probs=195.2
Q ss_pred CCCCcEEeecCCeeEEEEEeCCCc-EEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 308 FSKNNIIGTGRTGATYIAMLPGGC-FIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+.++..||-||||.|-++...... .+|+|.+++.. ...+.+..|-.+|..++.|.||++|..|.+....|+.||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 344567999999999999865543 48999887632 3456688999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
|-||.|...+.+++. ++......++..+++|++|||++ +||.|||||+|.++|.+|-+||.|||+|+.+....
T Consensus 502 ClGGElWTiLrdRg~----Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 502 CLGGELWTILRDRGS----FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hcCchhhhhhhhcCC----cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 999999999987764 88899999999999999999999 99999999999999999999999999999987654
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ..+||+.|.|||++.....+.++|.||+|+++|||++|.+||...++-..+..++.. +
T Consensus 575 KTw-----TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG--------------i 635 (732)
T KOG0614|consen 575 KTW-----TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG--------------I 635 (732)
T ss_pred cee-----eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh--------------h
Confidence 332 235999999999999999999999999999999999999999876543222111111 0
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCC
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHT 575 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs 575 (618)
|. -..+....+...+++++.+..+|.+|--
T Consensus 636 d~---i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 636 DK---IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred hh---hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 10 0112223445667777889999999965
No 386
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=8.5e-32 Score=276.89 Aligned_cols=216 Identities=23% Similarity=0.316 Sum_probs=178.8
Q ss_pred cCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
-|..++.||-|+||.|.++. .++...||+|.+++.. .....+..|-+||.....+-||++|-.|.+++..|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 37778899999999999998 4557889999997643 223457789999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++||++..+|.+.+- +.+..+..++.++..|+++.|.. |+|||||||+|||||.+|++||.|||++.-+...
T Consensus 710 YIPGGDmMSLLIrmgI----FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGI----FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred ccCCccHHHHHHHhcc----CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999877654 88888899999999999999999 9999999999999999999999999998644221
Q ss_pred C--------Cc-cc-----------------------------ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHH
Q 007088 462 D--------TH-LS-----------------------------TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLL 503 (618)
Q Consensus 462 ~--------~~-~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ 503 (618)
. .+ .. ......+||+.|+|||++....|+.-+|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 00 00 0011224999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCccccCHHHHHH
Q 007088 504 ELITGERPTHLTNAPESFKGSLVEWIT 530 (618)
Q Consensus 504 elltG~~Pf~~~~~~~~~~~~l~~~~~ 530 (618)
||+.|+.||......+. ...+..|..
T Consensus 863 em~~g~~pf~~~tp~~t-q~kv~nw~~ 888 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGET-QYKVINWRN 888 (1034)
T ss_pred HHhhCCCCccCCCCCcc-eeeeeehhh
Confidence 99999999987665432 334445543
No 387
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-32 Score=267.97 Aligned_cols=271 Identities=21% Similarity=0.266 Sum_probs=216.7
Q ss_pred cCHHHHHHhhccCCCCcEEeecCCeeEEEEEeCC------CcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCcccee
Q 007088 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLL 367 (618)
Q Consensus 296 ~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~ 367 (618)
.++.++.....+++....+.+|.||.||+|.+.+ .+.|.+|.++.. +.....+..|.-.+..+.|||+..+.
T Consensus 274 ~r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 274 RRLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred hhHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 3466777777788888999999999999997543 456777877653 33345688899999999999999999
Q ss_pred EEEEeC-CeeEEEEeecCCCccccccCCCCC----CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC
Q 007088 368 GFCVAK-KERLLVYSYLENGTLYDKLHPAEH----EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD 442 (618)
Q Consensus 368 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 442 (618)
+++.+. ...+++|.++.-|+|..++...+. ....++..+...++.|++.|++|||++ +|||.||.++|.+||
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 998664 567899999999999999873221 235577788899999999999999999 999999999999999
Q ss_pred CCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcc
Q 007088 443 GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESF 521 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~ 521 (618)
+..++||+|=.+++.+-+.+.+. .......+..||+||.+....|+.++|||||||++|||+| |+.|+...++.+..
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhc--LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~ 508 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHC--LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME 508 (563)
T ss_pred hheeEEeccchhccccCcccccc--cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH
Confidence 99999999999999876655442 2233345778999999999999999999999999999998 99998765543211
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..+....+-..+.+++.++..++.-||..+|++||+.+|+..-|.+.-.+
T Consensus 509 ------------------~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 509 ------------------HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred ------------------HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 11112222233456788999999999999999999999999999886443
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.7e-31 Score=261.06 Aligned_cols=237 Identities=28% Similarity=0.353 Sum_probs=190.4
Q ss_pred CCeeEEEEEeC-CCcEEEEEEeccCccC--HHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCccccccCC
Q 007088 318 RTGATYIAMLP-GGCFIMIKRLEDSQHS--EKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHP 394 (618)
Q Consensus 318 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 394 (618)
+||.||+|+.. +++.+++|++...... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999975 5899999999764322 57899999999999999999999999999999999999999999999875
Q ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCC
Q 007088 395 AEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFG 474 (618)
Q Consensus 395 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~g 474 (618)
... +++..+..++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||.+........ .....+
T Consensus 81 ~~~----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~-----~~~~~~ 148 (244)
T smart00220 81 RGR----LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL-----LTTFVG 148 (244)
T ss_pred ccC----CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccc-----cccccC
Confidence 432 88999999999999999999999 999999999999999999999999999987654321 122337
Q ss_pred cccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHH
Q 007088 475 DLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGE 554 (618)
Q Consensus 475 t~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 554 (618)
+..|++||...+..++.++||||||++++++++|..||..... ............... .......
T Consensus 149 ~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-------~~~~~~~~~~~~~~~--------~~~~~~~ 213 (244)
T smart00220 149 TPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-------LLELFKKIGKPKPPF--------PPPEWKI 213 (244)
T ss_pred CcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------HHHHHHHHhccCCCC--------ccccccC
Confidence 8899999999888889999999999999999999999865321 111111111110000 0000003
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 555 LHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 555 ~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...+.+++.+|+..+|++||++.++++
T Consensus 214 ~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 214 SPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CHHHHHHHHHHccCCchhccCHHHHhh
Confidence 356778888999999999999999986
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=6.2e-31 Score=282.12 Aligned_cols=262 Identities=20% Similarity=0.241 Sum_probs=179.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-----------------CCCcEEEEEEeccCcc-CHH--------------HHHHH
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-----------------PGGCFIMIKRLEDSQH-SEK--------------EFLSE 351 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~-~~~--------------~~~~E 351 (618)
..++|++.++||+|+||.||+|.. .+++.||||++..... ..+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 367899999999999999999963 2356899999864321 112 23346
Q ss_pred HHHHhcCCCCCc-----cceeEEEEe--------CCeeEEEEeecCCCccccccCCCCC--------------------C
Q 007088 352 INTLGSVRHRNL-----VPLLGFCVA--------KKERLLVYSYLENGTLYDKLHPAEH--------------------E 398 (618)
Q Consensus 352 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~--------------------~ 398 (618)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++.... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777753 3567999999999999998864321 0
Q ss_pred CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccc
Q 007088 399 VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGY 478 (618)
Q Consensus 399 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y 478 (618)
...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........... ....+++.|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~---~~g~~tp~Y 376 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNP---LYGMLDPRY 376 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCc---cccCCCcce
Confidence 12357788999999999999999999 999999999999999999999999999976543211111 112247899
Q ss_pred cCCCCCCCCC--------------------C--CCccchHHHHHHHHHHHhCCC-CCCCCCC----CCccccCHHHHHHH
Q 007088 479 VAPEYPRTLV--------------------A--TPKGDVYSFGVVLLELITGER-PTHLTNA----PESFKGSLVEWITL 531 (618)
Q Consensus 479 ~aPE~~~~~~--------------------~--~~~sDVwS~Gvil~elltG~~-Pf~~~~~----~~~~~~~l~~~~~~ 531 (618)
+|||.+.... + ..+.||||+||++|||++|.. ||..... ......++..|...
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~ 456 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY 456 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh
Confidence 9999865322 1 134799999999999999875 6643211 01112223333321
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCC---CCCCCHHHHHH
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTP---KERHTMFEVYQ 581 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 581 (618)
..... +- ...+.......+++.+++..+| .+|+|++|+++
T Consensus 457 ~~~~~------~~----~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 457 KGQKY------DF----SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccCC------Cc----ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11110 10 1112223455666668888765 78999999975
No 390
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-32 Score=244.70 Aligned_cols=202 Identities=19% Similarity=0.284 Sum_probs=167.0
Q ss_pred ccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC--ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS--QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 381 (618)
+.......||+|++|.|-+-+ ..+|+..|+|+++.. .+..++...|+++..+. .+|.+|.++|........++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 334446779999999998888 568999999999764 34556788899887665 79999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
.|.. ||..+-.+.-.....+++...-+|+..+.+||.|||++. .++|||+||+|||++.+|++|++|||++..+.++
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 9975 777665433333456899999999999999999999985 7999999999999999999999999999877653
Q ss_pred CCcccccccCCCCcccccCCCCCC----CCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPR----TLVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
-... -..|-..|||||.+. ...|+-++||||+|+++.||.+++.||...
T Consensus 203 iAkt-----~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 203 IAKT-----MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hHHH-----HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 3221 122678899999865 347899999999999999999999999754
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-31 Score=254.10 Aligned_cols=200 Identities=20% Similarity=0.273 Sum_probs=173.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 378 (618)
.++|....+||+|+|+.|..+.+ ++.+.||+|++++. ....+-++.|-.+..+. +||.+|-+..+|......++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 35688899999999999999994 56789999999763 23334466677776666 79999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|.||++||+|.-+++.++. ++++.+..+...|.-||.|||++ ||+.||||.+|+|+|..|++||.|||+++.-
T Consensus 329 vieyv~ggdlmfhmqrqrk----lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehhhhhc----CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 9999999999988877654 99999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
-...... ...+||+.|+|||++.+..|....|.|++||+++||+.|+.||+..
T Consensus 402 l~~gd~t----stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 402 LGPGDTT----STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred CCCCccc----ccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 3322222 2345999999999999999999999999999999999999999853
No 392
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=262.16 Aligned_cols=132 Identities=22% Similarity=0.373 Sum_probs=116.5
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-----C---CCccceeEEEEeC--
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-----H---RNLVPLLGFCVAK-- 373 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~~-- 373 (618)
.++|.+.++||-|-|++||++. ..+.+.||+|+.+..+...+.-..|+++|++++ | .+||+++++|...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 3689999999999999999999 567899999999888777778889999999984 2 4699999999753
Q ss_pred --CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 374 --KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 374 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
.+.|||+|++ |.+|..+|..... ..++...++.|++||+.||.|||.+| ||||-||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~Y--rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNY--RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCC--CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4889999999 5689999877655 45889999999999999999999998 99999999999999
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=284.51 Aligned_cols=247 Identities=24% Similarity=0.319 Sum_probs=187.0
Q ss_pred CCCCcEEeecCCee-EEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 308 FSKNNIIGTGRTGA-TYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 308 y~~~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
|...+.+|.|+.|+ ||+|.. +|+.||||++-... ..-..+|+..|+.- +|||||++++.-.++...|+..|.|..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~ 587 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC 587 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh
Confidence 55567789999874 799998 67799999985532 23456899999888 699999999999999999999999965
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---C--CceEEcccCcccccCC
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---D--FEPKLSDFGLARLMNP 460 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~~kl~DfG~a~~~~~ 460 (618)
+|.+++.....+.....-...+.+..|+++||++||+. +||||||||.||||+. + .+++|+|||+++.+..
T Consensus 588 -sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 588 -SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred -hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 99999987421111111134577889999999999998 9999999999999975 3 4699999999999876
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITG-ERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG-~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
....... ..+..||.+|+|||++....-+.++||||+||++|..++| .+||...-..+ ......+..+.
T Consensus 664 ~~sS~~r-~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~---------~NIl~~~~~L~ 733 (903)
T KOG1027|consen 664 GKSSFSR-LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ---------ANILTGNYTLV 733 (903)
T ss_pred Ccchhhc-ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh---------hhhhcCcccee
Confidence 5544433 4455699999999999988888899999999999999995 99997633211 11111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVY 580 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 580 (618)
.+ .. ..+. +..+||.+|+.+||..||++.+|+
T Consensus 734 ~L-----~~-~~d~---eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 734 HL-----EP-LPDC---EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred ee-----cc-CchH---HHHHHHHHhcCCCcccCCCHHHHh
Confidence 11 00 0111 556677799999999999999995
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-31 Score=247.09 Aligned_cols=261 Identities=22% Similarity=0.279 Sum_probs=192.0
Q ss_pred CcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eeEEEEe
Q 007088 311 NNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-----ERLLVYS 381 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lV~e 381 (618)
.+.||-|+||.||.++. ++|+.|+.|++.... ...+.+.+|+++|..++|.|++..++...-.. +.|+++|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 56799999999999995 579999999986532 45678899999999999999999998876543 5688999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
.|.. +|...+-... +++...++-++.||++||+|||+. +|.||||||.|.|++.+..+||+|||+++..+..
T Consensus 138 LmQS-DLHKIIVSPQ----~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 138 LMQS-DLHKIIVSPQ----ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHh-hhhheeccCC----CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 9865 8888876543 488889999999999999999999 9999999999999999999999999999976554
Q ss_pred CCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH--------HHHH
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW--------ITLL 532 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~--------~~~~ 532 (618)
+....+ ..+-|..|+|||++.+. .|+.+.||||.|||+.|++..+..|+..++.+.... +.+. .+..
T Consensus 210 ~~~hMT---qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~l-ItdLLGTPs~EaMr~A 285 (449)
T KOG0664|consen 210 DRLNMT---HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQM-IIDLLGTPSQEAMKYA 285 (449)
T ss_pred hhhhhH---HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHH-HHHHhCCCcHHHHHHH
Confidence 332221 11257899999998864 689999999999999999999998886554322111 0000 0000
Q ss_pred hcCCccchhccccccC---------CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 533 NTNSSLETAIDKSLLG---------NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
-++....++....+. ......-.+-+.+.+.++..||++|.+..+.+..+.
T Consensus 286 -CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 286 -CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred -hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 001111111111110 001122334556666899999999999999876543
No 395
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6e-30 Score=239.62 Aligned_cols=258 Identities=20% Similarity=0.346 Sum_probs=196.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEE-EEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGF-CVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lV~e~ 382 (618)
+.|.+.+.+|+|.||.+-++.+ ...+.+++|.++......++|.+|...--.| .|.||+.-|++ |...+.+++++||
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 4688889999999999999995 4578999999999888899999998776666 59999988865 5667788899999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC--CCCceEEcccCcccccCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD--GDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~DfG~a~~~~~ 460 (618)
+|.|+|.+-+...+ +.+....+++.|+++|+.|||++ ++||||||.+||||- +..++||+|||..+..+.
T Consensus 104 aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 104 APRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred CccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999887644 77888999999999999999999 999999999999993 445799999999987653
Q ss_pred CCCcccccccCCCCcccccCCCCCCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRT-----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.-.. ..-+..|.+||.... ....+.+|||.||+++|..+||..||+.... ......+|.....+.
T Consensus 176 tV~~-------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~---~d~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 176 TVKY-------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI---MDKPYWEWEQWLKRK 245 (378)
T ss_pred eehh-------hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc---cCchHHHHHHHhccc
Confidence 2211 113567999996542 2457889999999999999999999984332 223445555443322
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.. .+. +.+........++.++-+.++|++|-...++.++-.....+
T Consensus 246 ~~-------~~P-~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 246 NP-------ALP-KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE 291 (378)
T ss_pred Cc-------cCc-hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence 11 111 11112223445555589999999997777777776665444
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=7.4e-30 Score=260.84 Aligned_cols=195 Identities=24% Similarity=0.327 Sum_probs=168.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCH---------HHHHHHHHHHhcCC---CCCccceeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE---------KEFLSEINTLGSVR---HRNLVPLLGFCVA 372 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~E~~~l~~l~---h~niv~l~~~~~~ 372 (618)
.+|+..+.+|+|+||.|+.|+++ +...|+||.+.+.+.-. ..+-.|+.+|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35889999999999999999954 56789999987654211 12567999999997 9999999999999
Q ss_pred CCeeEEEEeec-CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcc
Q 007088 373 KKERLLVYSYL-ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSD 451 (618)
Q Consensus 373 ~~~~~lV~e~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 451 (618)
++.+|++||-- ++-+|++++..... +++.++..|++|++.|+++||++ +|||||||-+||.++.+|-+||+|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~----m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPR----MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCc----cchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 99999999965 46689999987654 99999999999999999999999 999999999999999999999999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCC
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTH 513 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~ 513 (618)
||.|.+..... .....||..|.|||++.+.+| +..-|||++|++||.++....||+
T Consensus 714 fgsaa~~ksgp------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSGP------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCCC------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99997765432 223349999999999999887 567999999999999999999886
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=2.8e-28 Score=234.59 Aligned_cols=209 Identities=32% Similarity=0.483 Sum_probs=181.2
Q ss_pred EeecCCeeEEEEEeCC-CcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcccc
Q 007088 314 IGTGRTGATYIAMLPG-GCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYD 390 (618)
Q Consensus 314 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 390 (618)
||+|++|.||++...+ ++.+++|++..... ..+.+.+|+..+++++|++|+++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 89999999987554 35679999999999999999999999999899999999999999999
Q ss_pred ccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-CCceEEcccCcccccCCCCCcccccc
Q 007088 391 KLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLARLMNPVDTHLSTFV 469 (618)
Q Consensus 391 ~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~~~~ 469 (618)
++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+........ ..
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~----~~ 150 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS----LL 150 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----hh
Confidence 987542 3488999999999999999999999 9999999999999999 89999999999987654321 01
Q ss_pred cCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccC
Q 007088 470 NGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLG 548 (618)
Q Consensus 470 ~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 548 (618)
....+...|++||..... .++.++|+|++|++++++
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 112367889999998877 788999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 549 NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
..+.+++.+|++.||.+||++.++++.
T Consensus 188 -------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 246677789999999999999999864
No 398
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.5e-29 Score=231.46 Aligned_cols=195 Identities=19% Similarity=0.298 Sum_probs=164.6
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-CCCccceeEEEEeCC--eeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKK--ERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~lV~ 380 (618)
.++|++.+++|+|.|+.||.|. ..+.+.++||+++.. ..+.+.+|+.+|..++ ||||+++++...++. ...+|+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 4678889999999999999999 677899999999874 3567889999999997 999999999998765 456999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEcccCcccccC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDFGLARLMN 459 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~a~~~~ 459 (618)
||+.+-+...+. ..++...+..++.++++||.|+|++ ||.|||+||.|++||.. -.++|+|+|+|.+..
T Consensus 115 E~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 115 EYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 999987766554 2367778899999999999999999 99999999999999954 469999999998876
Q ss_pred CCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
+... .+-++.+..|.-||.+-. +.|+..-|+|||||++..|+..+.||....
T Consensus 185 p~~e-----YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~ 237 (338)
T KOG0668|consen 185 PGKE-----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 237 (338)
T ss_pred CCce-----eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCC
Confidence 5432 223346778899998764 457889999999999999999999997543
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=1.5e-29 Score=255.59 Aligned_cols=202 Identities=21% Similarity=0.177 Sum_probs=174.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCC------CCCccceeEEEEeCCeeE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR------HRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~~~~ 377 (618)
-.+|.+....|+|-|++|.+|.. .-|..||||++...+...+.=+.|+++|++|+ --|+++++-.|...++.|
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 46788899999999999999994 45789999999988777777789999999995 358999999999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEcccCccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDFGLAR 456 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~a~ 456 (618)
||+|-+.- +|.++|...+.+ ..+....+..++.|+.-||..|... +|+|.||||+|||+++. ..+||||||.|.
T Consensus 511 lVFE~Lsl-NLRevLKKyG~n-vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 511 LVFEPLSL-NLREVLKKYGRN-VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred EEehhhhc-hHHHHHHHhCcc-cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCcccc
Confidence 99998854 899999876543 4588889999999999999999998 99999999999999865 458999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
........... -+..|+|||++.|.+|+...|+||.||.||||.||+..|.+...
T Consensus 586 ~~~eneitPYL------VSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 586 FASENEITPYL------VSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred ccccccccHHH------HHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 77654433222 35689999999999999999999999999999999999986544
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-28 Score=235.32 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=189.2
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 374 (618)
..+|.....+|.|.- .|..|. .-.++.||+|.+... ....++..+|...+..++|+||++++.+|.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 346777788899888 565555 345889999987542 344567789999999999999999999986443
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
+.|+|||||.. +|.+.+. ..++-..+..|+.|++.|++|||+. +|+||||||+||++..+..+||.|||+
T Consensus 95 e~y~v~e~m~~-nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 57999999965 8888876 2367788899999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
|+..+.. ......+.|..|+|||++-+..+.+.+||||.||++.||++|+..|.+.+. +.+|.+....
T Consensus 165 ar~e~~~-----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~-------idQ~~ki~~~ 232 (369)
T KOG0665|consen 165 ARTEDTD-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDH-------IDQWNKIIEQ 232 (369)
T ss_pred hcccCcc-----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchH-------HHHHHHHHHH
Confidence 9865443 112233478899999999998899999999999999999999998875432 2222221111
Q ss_pred CCc---------------------------cchhc-cccccC--CCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSS---------------------------LETAI-DKSLLG--NGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~---------------------------~~~~~-d~~l~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+. ..+.+ |..... +...-......+++.+||..||++|.+++++++
T Consensus 233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 100 00111 111100 011123344556777999999999999999975
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=3.9e-27 Score=229.96 Aligned_cols=198 Identities=30% Similarity=0.423 Sum_probs=171.1
Q ss_pred CCCCcEEeecCCeeEEEEEeCC-CcEEEEEEeccCcc--CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 308 FSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQH--SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
|...+.||+|++|.||++...+ ++.+++|.+..... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5567899999999999999765 89999999976543 46788999999999999999999999999899999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++..... .+++.....++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 81 GGDLFDYLRKKGG---KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 9999999875432 178999999999999999999999 9999999999999999999999999999876543200
Q ss_pred ccccccCCCCcccccCCCCC-CCCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 007088 465 LSTFVNGEFGDLGYVAPEYP-RTLVATPKGDVYSFGVVLLELITGERPTHL 514 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwS~Gvil~elltG~~Pf~~ 514 (618)
......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 155 ---~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ---LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ---cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11123367889999998 677788899999999999999999999965
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-28 Score=254.74 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=196.1
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|+....+|.|.||.|||++ ...++..|+|+++-.. ...+-+++|+-+++..+|||||.+++.+...+..|+.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 3568888999999999999999 5678999999998644 3455678999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
|.+|+|++.-+... ++++.++....+..++|++|||++ +-+|||||-.||++++.|.+|++|||.+..+...-
T Consensus 94 cgggslQdiy~~Tg----plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred cCCCcccceeeecc----cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhh
Confidence 99999999877554 599999999999999999999999 99999999999999999999999999987765432
Q ss_pred CcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.... ...||+.|||||+.. .+.|..++|||+.|+...|+---++|..+.-+ ..+-.+.......
T Consensus 167 ~Krk----sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp---------mr~l~LmTkS~~q 233 (829)
T KOG0576|consen 167 AKRK----SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP---------MRALFLMTKSGFQ 233 (829)
T ss_pred hhhh----cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch---------HHHHHHhhccCCC
Confidence 2222 234999999999753 56788999999999999999887777543211 1111222211110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVY 580 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 580 (618)
.+.+.. .......|-++++.|+..+|++||+++.++
T Consensus 234 ---pp~lkD--k~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 234 ---PPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred ---CCcccC--CccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 111111 112233455666699999999999998764
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=2e-27 Score=236.48 Aligned_cols=205 Identities=24% Similarity=0.317 Sum_probs=166.8
Q ss_pred HHHhhccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCe
Q 007088 301 LMKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 301 l~~~~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 375 (618)
+....+.|...++||+|.|++||++++. ....||+|.+.... ....+.+|+++|..+ .+.||+++.+++..+++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 4445667899999999999999999943 46899999986643 334688999999999 49999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-CCceEEcccCc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGL 454 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~ 454 (618)
..+|+||++..+..++.. .++...+..++..++.||+++|+. |||||||||+|++.+. .+.-.|.|||+
T Consensus 110 v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechh
Confidence 999999999988877764 377889999999999999999999 9999999999999985 45689999999
Q ss_pred ccccCCCC------C-------c---------------------------ccccccCCCCcccccCCCCCCC-CCCCCcc
Q 007088 455 ARLMNPVD------T-------H---------------------------LSTFVNGEFGDLGYVAPEYPRT-LVATPKG 493 (618)
Q Consensus 455 a~~~~~~~------~-------~---------------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~s 493 (618)
|....... . . .......+.||++|+|||++.. ...++++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97211100 0 0 0000112459999999998764 4568899
Q ss_pred chHHHHHHHHHHHhCCCCCCCCC
Q 007088 494 DVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 494 DVwS~Gvil~elltG~~Pf~~~~ 516 (618)
||||.|||++-+++++.||....
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~ 282 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAK 282 (418)
T ss_pred ceeeccceeehhhccccccccCc
Confidence 99999999999999999997544
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=5.4e-27 Score=270.69 Aligned_cols=198 Identities=17% Similarity=0.161 Sum_probs=138.8
Q ss_pred cCCC-CCccceeEEE-------EeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 007088 357 SVRH-RNLVPLLGFC-------VAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428 (618)
Q Consensus 357 ~l~h-~niv~l~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 428 (618)
.++| +||++++++| ...+..+.++||+ +++|.+++.... ..+++.+++.++.||++||+|||++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 4456 6888888887 2234567888987 559999997543 4599999999999999999999999 9
Q ss_pred ceecCCCCCCeeeCC-------------------CCceEEcccCcccccCCCCCc------------ccccccCCCCccc
Q 007088 429 IIHRNISSKCILLDG-------------------DFEPKLSDFGLARLMNPVDTH------------LSTFVNGEFGDLG 477 (618)
Q Consensus 429 ivH~Dlkp~NIll~~-------------------~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~gt~~ 477 (618)
|+||||||+|||++. ++.+|++|||+++........ .........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 445666666666542210000 0000011347889
Q ss_pred ccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHH
Q 007088 478 YVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQ 557 (618)
Q Consensus 478 y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 557 (618)
|+|||++.+..++.++|||||||++|||++|..|+.... ..+...... ...+. .......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~------~~~~~~~~~---------~~~~~-----~~~~~~~ 240 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS------RTMSSLRHR---------VLPPQ-----ILLNWPK 240 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH------HHHHHHHHh---------hcChh-----hhhcCHH
Confidence 999999999999999999999999999999988764311 011111100 00110 0112234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 007088 558 FLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 558 l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...++.+||+.||.+||++.|+++
T Consensus 241 ~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 241 EASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHhCCCChhhCcChHHHhh
Confidence 457777999999999999999975
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=1.9e-25 Score=210.04 Aligned_cols=169 Identities=22% Similarity=0.214 Sum_probs=127.1
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|||.+++...+ ..+++.+++.|+.|+++||+|||++ + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVRG---RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 68888887543 3599999999999999999999998 6 999999999999999 99998764322
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..+.......... +
T Consensus 64 ------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~----~-- 128 (176)
T smart00750 64 ------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL---SAILEILLNGMPADDPR----D-- 128 (176)
T ss_pred ------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh---cHHHHHHHHHhccCCcc----c--
Confidence 13789999999999999999999999999999999999999653221 11122221111111000 0
Q ss_pred ccCCCCHHHH--HHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 546 LLGNGFDGEL--HQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 546 l~~~~~~~~~--~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
........ ..+.+++.+||..||.+||++.|+++.+..+..
T Consensus 129 --~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 129 --RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred --cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 00011122 258888999999999999999999999877644
No 406
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1e-24 Score=210.22 Aligned_cols=279 Identities=18% Similarity=0.171 Sum_probs=219.8
Q ss_pred cCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecC
Q 007088 307 SFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.|.+.++||+|+||..+.|+ +-++++||||.-.. .....++..|....+.| ..+.|..++-|-..+.+-.||+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 68889999999999999999 67899999996543 33445678888888887 4789999998888888889999988
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-----ceEEcccCcccccC
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-----EPKLSDFGLARLMN 459 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~DfG~a~~~~ 459 (618)
|.+|+|++.-.+ ..++..++..+|.|++.-++|+|++ .+|.|||||+|+||...+ .+.++|||+|+.+.
T Consensus 107 GPSLEDLFD~Cg---R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 107 GPSLEDLFDLCG---RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred CcCHHHHHHHhc---CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 779999887655 4699999999999999999999999 999999999999996443 48999999999987
Q ss_pred CCCCccccccc---CCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 460 PVDTHLSTFVN---GEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 460 ~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
+..+......+ .-.||..||+--...+...+.+.|.=|+|-+++..+-|..||+....+. ..+.. .+.+
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t-----nK~kY---eKIG 252 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT-----NKEKY---EKIG 252 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc-----hHHHH---HHhc
Confidence 76655444333 2349999999999999999999999999999999999999998765421 11111 1111
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCCCCC
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPSNT 604 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~ 604 (618)
.....-......+..+++...-++.+++ .+-.+-|..+-+...+.++..+.+.+.|-+++|-..+
T Consensus 253 e~Kr~T~i~~Lc~g~P~efa~Yl~yvR~---L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 253 ETKRSTPIEVLCEGFPEEFATYLRYVRR---LDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred cccccCCHHHHHhcCHHHHHHHHHHHHh---cCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 1111111111223355566666666555 7888889999999999999999999999999987554
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=6.2e-24 Score=219.42 Aligned_cols=278 Identities=19% Similarity=0.155 Sum_probs=205.9
Q ss_pred cCCCCcEEeecCCeeEEEEEeCCC--cEEEEEEeccCc-cCHHHHHHHHHHHhcCCC----CCccceeEEE-EeCCeeEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPGG--CFIMIKRLEDSQ-HSEKEFLSEINTLGSVRH----RNLVPLLGFC-VAKKERLL 378 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 378 (618)
+|.+.++||+|+||.||++..... ..+|+|...... .....+..|..++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999996543 588999876542 222267788888888863 6899999998 47778899
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-----CceEEcccC
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-----FEPKLSDFG 453 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~DfG 453 (618)
||+.+ |.+|.++..... ...++..+..+|+.|++.+|++||+. |++||||||+|+++... ..+.|.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99988 679999875554 25699999999999999999999999 99999999999999765 469999999
Q ss_pred ccc--ccCCCCCc---cccc-ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHH
Q 007088 454 LAR--LMNPVDTH---LSTF-VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE 527 (618)
Q Consensus 454 ~a~--~~~~~~~~---~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~ 527 (618)
+++ ........ .... .....||..|.++....+...+++.|+||++.++.|++.|..||........ ..
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-----~~ 247 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-----KS 247 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-----HH
Confidence 998 33222111 1111 1234499999999999999999999999999999999999999965443211 11
Q ss_pred HHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCCCCC
Q 007088 528 WITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPSNT 604 (618)
Q Consensus 528 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~ 604 (618)
-+.......... . .......+ +.++...+-..+..++|....+...+++.....+...++.++|+...
T Consensus 248 ~~~~~~~~~~~~----~--~~~~~~~~---~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~~ 315 (322)
T KOG1164|consen 248 KFEKDPRKLLTD----R--FGDLKPEE---FAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVKL 315 (322)
T ss_pred HHHHHhhhhccc----c--ccCCChHH---HHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcccccc
Confidence 111111000000 0 11112233 44444455558999999999999999999888777777777777553
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=9.6e-24 Score=217.50 Aligned_cols=178 Identities=17% Similarity=0.148 Sum_probs=134.0
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEEeC--CCcEEEEEEeccC------ccCHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAMLP--GGCFIMIKRLEDS------QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 373 (618)
....++|+..+.||+|+||.||+|... +++.||||++... ....+.+.+|++++++++|+|+++.+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 345678999999999999999999853 5788899987532 1224568999999999999999863322 2
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCC-CCCCeeeCCCCceEEccc
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNI-SSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~Df 452 (618)
+..++||||++|++|... .. .. ...++.|+++||+|||+. ||+|||| ||+|||++.++.+||+||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~-------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP-------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc-------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 467999999999999632 11 11 146788999999999999 9999999 999999999999999999
Q ss_pred CcccccCCCCCccc----ccccCCCCcccccCCCCCCCCC------CCCccchH
Q 007088 453 GLARLMNPVDTHLS----TFVNGEFGDLGYVAPEYPRTLV------ATPKGDVY 496 (618)
Q Consensus 453 G~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~------~~~~sDVw 496 (618)
|+|+.......... .......+++.|+|||++.-.+ .+..+|-|
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99997754332111 1112345788899999876432 23446666
No 409
>PLN03150 hypothetical protein; Provisional
Probab=99.89 E-value=2.5e-23 Score=231.66 Aligned_cols=168 Identities=32% Similarity=0.574 Sum_probs=133.6
Q ss_pred cCCcchHHHHHHHHHhccCCCCccccCccCCCCCCCCCCcccceecCCCC-C--CcEEEEEecCCcceeeCCcCCCCCCC
Q 007088 31 LATLNDIECLKSVKNSLEDPFNYLTTSWNFNNNTEGFICQFTGVDCWHPD-E--NKVLNIRLSDMGLKGQFPRGIERCTS 107 (618)
Q Consensus 31 ~~~~~~~~~L~~~k~~~~~~~~~l~~~W~~~~~~~~~~c~w~gv~c~~~~-~--~~v~~l~l~~~~l~g~~p~~~~~l~~ 107 (618)
.+...|..||+.+|+++.++.. .+|+++ ++.+..|.|.||.|.... . ..|+.|+|++|+|+|.+|+++++|++
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~---~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~ 443 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR---FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRH 443 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc---CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCC
Confidence 3566899999999999977642 279743 222233489999995321 1 35899999999999999999999999
Q ss_pred CCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccc
Q 007088 108 LTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVA 187 (618)
Q Consensus 108 L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~ 187 (618)
|+.|+|++|+|+|.+|..++. +++|+.|+|++|+|+|.+|.++++|++|+.|+|++|+|+|.+|..++.+.
T Consensus 444 L~~L~Ls~N~l~g~iP~~~~~-l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~-------- 514 (623)
T PLN03150 444 LQSINLSGNSIRGNIPPSLGS-ITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL-------- 514 (623)
T ss_pred CCEEECCCCcccCcCChHHhC-CCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhcc--------
Confidence 999999999999999988875 99999999999999999999999999999999999999999998875431
Q ss_pred cccccCCCCCCCccccccccccCCCCCCCCCC-CCCCC
Q 007088 188 SNLLTGPVPSFANVNFTAEDFANNSGLCGKPL-NPCPG 224 (618)
Q Consensus 188 ~N~l~g~ip~~~~~~~~~~~~~~n~~~c~~~~-~~C~~ 224 (618)
.+...+++.+|+.+|+.|. ..|..
T Consensus 515 -------------~~~~~l~~~~N~~lc~~p~l~~C~~ 539 (623)
T PLN03150 515 -------------LHRASFNFTDNAGLCGIPGLRACGP 539 (623)
T ss_pred -------------ccCceEEecCCccccCCCCCCCCcc
Confidence 0223456788888998765 67853
No 410
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=6.3e-24 Score=199.18 Aligned_cols=243 Identities=23% Similarity=0.345 Sum_probs=185.6
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
-+|.+...|..|+|+++++ .++.|+++-.+ ...++|..|.-.|+-+.||||..+++.|..+.+..++..||+.|+|
T Consensus 196 tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 3688889999999998554 45567775432 3446799999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEc--ccCcccccCCCCCccc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS--DFGLARLMNPVDTHLS 466 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~--DfG~a~~~~~~~~~~~ 466 (618)
+..++.... ...+-.++.+++.++++|++|||+. .|-|..--|.+..+++|++.+++|+ |--++..
T Consensus 275 ynvlhe~t~--vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfq--------- 342 (448)
T KOG0195|consen 275 YNVLHEQTS--VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ--------- 342 (448)
T ss_pred HHHHhcCcc--EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeee---------
Confidence 999997765 5678889999999999999999997 3335555788999999999988874 3222111
Q ss_pred ccccCCCCcccccCCCCCCCCCCC---CccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVAT---PKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~---~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
..++.-.+.|++||.++..+-+ .++|+|||.+++||+.|...||.+..+-+-.- ++.-
T Consensus 343 --e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm-----------------kial 403 (448)
T KOG0195|consen 343 --EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM-----------------KIAL 403 (448)
T ss_pred --ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh-----------------hhhh
Confidence 1122246889999998776543 58999999999999999999998755422110 0011
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
..++...+......+.+++.-|+..||.+||.++.|+-.|+++
T Consensus 404 eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 404 EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 1222222334455677777799999999999999999999876
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=3.2e-23 Score=191.55 Aligned_cols=205 Identities=20% Similarity=0.247 Sum_probs=169.8
Q ss_pred hccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCC-CCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH-RNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|...++||+|+||.+|.|. ..+|..||||.-... ....++..|..+...+++ ..|..+..|..+..+-.+||+.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 4579999999999999999999 788999999986543 334467788888888875 6777788888888888999998
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC---CceEEcccCcccccC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD---FEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfG~a~~~~ 459 (618)
+ |.+|++++.-.. ..++..+++.++.|++.-++|+|.+ +++||||||+|+|..-+ ..+.++|||+|+.+-
T Consensus 93 L-GPsLEdLfnfC~---R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 93 L-GPSLEDLFNFCS---RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred c-CccHHHHHHHHh---hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 8 779999886554 4588999999999999999999999 99999999999999633 458999999999876
Q ss_pred CCCCcccccc---cCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 460 PVDTHLSTFV---NGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 460 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
+..+...... ....||..|.+-....+...+.+.|+=|+|.+|..+--|..||+....
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 5443332222 234589999998888788889999999999999999999999987543
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=2.6e-21 Score=199.08 Aligned_cols=263 Identities=26% Similarity=0.348 Sum_probs=195.5
Q ss_pred CCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc----CHHHHHHHHHHHhcCCCC-CccceeEEEEeCCeeEEEEee
Q 007088 308 FSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH----SEKEFLSEINTLGSVRHR-NLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lV~e~ 382 (618)
|...+.||.|+||.||++... ..+++|.+..... ....+.+|+.++..+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999976 7889999875432 366799999999999988 799999999777778999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-ceEEcccCcccccCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-EPKLSDFGLARLMNPV 461 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~ 461 (618)
+.++++.+++...... ..+.......+..|++.++.|+|+. +++|||+||+||+++..+ .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999666544311 2588899999999999999999999 999999999999999988 7999999999865543
Q ss_pred CCccc--ccccCCCCcccccCCCCCCC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 462 DTHLS--TFVNGEFGDLGYVAPEYPRT---LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 462 ~~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
..... .......|+..|+|||...+ ..++...|+||+|++++++++|..||...... ..............
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~ 231 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELP 231 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcC
Confidence 32211 12234558999999999887 57889999999999999999999997654321 00111111111110
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.. .................+.+++..|+..+|..|.++.+....
T Consensus 232 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 TP--SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred Cc--ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 000000000001223456677779999999999999888765
No 413
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1.9e-23 Score=229.19 Aligned_cols=253 Identities=17% Similarity=0.182 Sum_probs=185.4
Q ss_pred CCCcEEeecCCeeEEEEEe-CCCcEEEEEEec----cCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 309 SKNNIIGTGRTGATYIAML-PGGCFIMIKRLE----DSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 309 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~----~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
...+.+|.|.+|.|+.... ...+..+.|.+. ... .....+..|+-+-..++|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 3467899999998887773 233333444332 211 11122566777788889999988888777766666669
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++ +|+.++.... .+...++-.+++|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+....-
T Consensus 401 E~~~~-Dlf~~~~~~~----~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG----KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hcccH-HHHHHHhccc----ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence 99999 9999987652 378888999999999999999999 999999999999999999999999999976654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCC-ccchHHHHHHHHHHHhCCCCCCCCCCCCccc--cCHHHHHHHHhcCCc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATP-KGDVYSFGVVLLELITGERPTHLTNAPESFK--GSLVEWITLLNTNSS 537 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~--~~l~~~~~~~~~~~~ 537 (618)
..........+.+|+..|+|||.+.+..|.+ ..||||.|+++..|++|+.||......+... .....|.....
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~---- 548 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFE---- 548 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcccccccccc----
Confidence 4333334455677999999999999998876 6999999999999999999997654322110 00000000000
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
-........+.....++.+||+.||.+|.|+++|++
T Consensus 549 --------~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 549 --------GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred --------ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000112334556677888999999999999999976
No 414
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.86 E-value=1e-21 Score=232.99 Aligned_cols=156 Identities=33% Similarity=0.655 Sum_probs=123.8
Q ss_pred CcchHHHHHHHHHhccCCCCccccCccCCCCCCCCCCcccceecCCCCCCcEEEEEecCCcceeeCCcCCCCCCCCCeEE
Q 007088 33 TLNDIECLKSVKNSLEDPFNYLTTSWNFNNNTEGFICQFTGVDCWHPDENKVLNIRLSDMGLKGQFPRGIERCTSLTGLD 112 (618)
Q Consensus 33 ~~~~~~~L~~~k~~~~~~~~~l~~~W~~~~~~~~~~c~w~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~ 112 (618)
.+.|..||++||+++.+|.+.+. +|+.. .+||.|.||+|++ .++|+.|+|++|+++|.+|+.+..+++|+.|+
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~-~w~~~----~~~c~w~gv~c~~--~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~ 99 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLS-NWNSS----ADVCLWQGITCNN--SSRVVSIDLSGKNISGKISSAIFRLPYIQTIN 99 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCC-CCCCC----CCCCcCcceecCC--CCcEEEEEecCCCccccCChHHhCCCCCCEEE
Confidence 55899999999999988877665 89643 4599999999975 46999999999999999999999999999999
Q ss_pred ccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCcccccccccccccccccccc
Q 007088 113 LSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLT 192 (618)
Q Consensus 113 l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~ 192 (618)
|++|+++|.+|..++.++++|++|+|++|+++|.+|. +.+++|++|+|++|+++|.+|..++++++|+.|+|++|.++
T Consensus 100 Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~ 177 (968)
T PLN00113 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLV 177 (968)
T ss_pred CCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccc
Confidence 9999999999999885588888888888888776664 34566666666666666666666666666666666666666
Q ss_pred CCCCC
Q 007088 193 GPVPS 197 (618)
Q Consensus 193 g~ip~ 197 (618)
|.+|.
T Consensus 178 ~~~p~ 182 (968)
T PLN00113 178 GKIPN 182 (968)
T ss_pred ccCCh
Confidence 65554
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=1.6e-21 Score=184.93 Aligned_cols=139 Identities=17% Similarity=0.139 Sum_probs=109.4
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc---C-------HHH-----------------HHHHHHHHhcCCCCCc
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH---S-------EKE-----------------FLSEINTLGSVRHRNL 363 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~-------~~~-----------------~~~E~~~l~~l~h~ni 363 (618)
.+.||+|++|.||+|...+|+.||+|+++.... . ... ...|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 467999999999999987999999999965421 1 112 2349999999988877
Q ss_pred cceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHH-HhCCCCCceecCCCCCCeeeC
Q 007088 364 VPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL-HHNCNPRIIHRNISSKCILLD 442 (618)
Q Consensus 364 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlkp~NIll~ 442 (618)
.....+.. ...++||||++++++....... ..++......++.|++.+|.|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~----~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD----APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc----CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 54443322 2348999999987776543222 3488999999999999999999 688 999999999999998
Q ss_pred CCCceEEcccCcccccC
Q 007088 443 GDFEPKLSDFGLARLMN 459 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~ 459 (618)
++.++|+|||+|....
T Consensus 153 -~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 -DGKLYIIDVSQSVEHD 168 (190)
T ss_pred -CCcEEEEEccccccCC
Confidence 4789999999997654
No 416
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=2.4e-22 Score=219.71 Aligned_cols=251 Identities=20% Similarity=0.223 Sum_probs=182.7
Q ss_pred cCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccC--ccCHHHHHHHHHH--HhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDS--QHSEKEFLSEINT--LGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+|...+.||++.|=.|.+|+.+.|. |+||++-+. ....+.|.++++- ...++|||++++.-+-......|||=+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5667788999999999999998887 889998543 2333444444333 4455899999998887777778899999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc--CC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM--NP 460 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~--~~ 460 (618)
+.+ +|.|.+..+. .+...+.+.|+.|++.||..+|.. ||+|||||.+|||++.-..+.|+||..-+.. ..
T Consensus 103 vkh-nLyDRlSTRP----FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 103 VKH-NLYDRLSTRP----FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred Hhh-hhhhhhccch----HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 977 9999998664 378888899999999999999999 9999999999999999999999999866542 11
Q ss_pred -CCCcccccccCCCCcccccCCCCCCCC----------C-CCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHH
Q 007088 461 -VDTHLSTFVNGEFGDLGYVAPEYPRTL----------V-ATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVE 527 (618)
Q Consensus 461 -~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~ 527 (618)
.......+.........|+|||.+... . .+++-||||+||++.||++ |++||.. .+
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-----------SQ 243 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-----------SQ 243 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-----------HH
Confidence 112222333444455689999965431 1 5688999999999999998 7888853 11
Q ss_pred HHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 528 WITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 528 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
............+.+-..+. -..+.+++..|++.||.+|-++++.++.-+
T Consensus 244 L~aYr~~~~~~~e~~Le~Ie-------d~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 244 LLAYRSGNADDPEQLLEKIE-------DVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHhHhccCccCHHHHHHhCc-------CccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 11111111111111111111 124667888999999999999999998743
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=1.3e-21 Score=187.66 Aligned_cols=170 Identities=11% Similarity=0.099 Sum_probs=132.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHH----------HHHHHHHHhcCCCCCccceeEEEEeC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKE----------FLSEINTLGSVRHRNLVPLLGFCVAK 373 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----------~~~E~~~l~~l~h~niv~l~~~~~~~ 373 (618)
..++|...+.+|.|+||.||++.. ++..+|+|.+.......+. +.+|+..+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357899999999999999999766 5678999999754322222 57899999999999999999986643
Q ss_pred --------CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC
Q 007088 374 --------KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445 (618)
Q Consensus 374 --------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 445 (618)
+..++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||+++.++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC
Confidence 35789999999999987632 222 2456999999999999 999999999999999988
Q ss_pred ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHH
Q 007088 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 506 (618)
Q Consensus 446 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ell 506 (618)
++|+|||............ .+.....+..++|+||||+++..+.
T Consensus 173 -i~liDfg~~~~~~e~~a~d----------------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRKAKD----------------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccchhhHH----------------HHHHHhHhcccccccceeEeehHHH
Confidence 9999999887553211110 0233344667999999999987654
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.85 E-value=1.2e-20 Score=179.48 Aligned_cols=140 Identities=16% Similarity=0.134 Sum_probs=111.8
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccC---------------------------HHHHHHHHHHHhcCCCCCc
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHS---------------------------EKEFLSEINTLGSVRHRNL 363 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~E~~~l~~l~h~ni 363 (618)
...||+|++|.||+|...+|+.||||+++..... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999998754210 1123578999999999988
Q ss_pred cceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeC
Q 007088 364 VPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLD 442 (618)
Q Consensus 364 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~ 442 (618)
.....+... ..++||||++++++....... ..++......++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 655554433 348999999987654332111 247788899999999999999999 8 999999999999999
Q ss_pred CCCceEEcccCcccccCC
Q 007088 443 GDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 443 ~~~~~kl~DfG~a~~~~~ 460 (618)
++.++|+|||++.....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 78999999999987654
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.5e-20 Score=176.41 Aligned_cols=187 Identities=18% Similarity=0.138 Sum_probs=141.8
Q ss_pred CCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHH-----HHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEeec
Q 007088 310 KNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEK-----EFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 310 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
....|++|+||+||.+.. .+.+++.+.+.......+ .+.+|+++|+++. |+++++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999997766 778888888876554333 5789999999995 5889999886 3469999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCC-CCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNI-SSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+|.+|.+.+.. ....++.|++.+|+++|+. ||+|||| ||+|||++.++.++|+|||+|.......
T Consensus 81 ~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 99888654321 1135778999999999999 9999999 7999999999999999999998654322
Q ss_pred Cc----cc-------ccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 463 TH----LS-------TFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 463 ~~----~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
.. .. ... ...++.|++|+...- ..--...+.++-|.-+|.++|++.+...+.+
T Consensus 147 ~~~r~L~~rDl~~llk~~--~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHK--RMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred hHHHHHHHHHHHHHHHHH--HhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 11 00 001 114677777774322 2222578999999999999999998776544
No 420
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.81 E-value=6.7e-20 Score=192.22 Aligned_cols=219 Identities=26% Similarity=0.402 Sum_probs=163.7
Q ss_pred HhcCCCCCccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCc-eecC
Q 007088 355 LGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRI-IHRN 433 (618)
Q Consensus 355 l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-vH~D 433 (618)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.... ..++|.-...+.++|+.||+|||.. +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~---~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED---IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc---cCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 457889999999999999999999999999999999998744 5699999999999999999999988 55 9999
Q ss_pred CCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC-------CCCCccchHHHHHHHHHHH
Q 007088 434 ISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-------VATPKGDVYSFGVVLLELI 506 (618)
Q Consensus 434 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDVwS~Gvil~ell 506 (618)
++++|.++|....+||+|||+............. .......-|.|||.+.+. ..+.+.||||||++++|++
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~--~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAH--HPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred eccccceeeeeEEEEechhhhccccccccccccc--chhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 9999999999999999999998876421000000 000124579999987753 1467899999999999999
Q ss_pred hCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 507 TGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 507 tG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
+.+.||......... ..+...+.. .....+.+.+.... +....+..++.+||..+|.+||++++|-..++.+
T Consensus 153 ~r~~~~~~~~~~~~~-~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDP-DEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred hccCccccccccCCh-HHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 999999875443222 112222211 01111222221111 2233688888999999999999999999988877
Q ss_pred hhh
Q 007088 587 AER 589 (618)
Q Consensus 587 ~~~ 589 (618)
...
T Consensus 225 ~~~ 227 (484)
T KOG1023|consen 225 NKG 227 (484)
T ss_pred ccc
Confidence 553
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=2.4e-19 Score=200.56 Aligned_cols=256 Identities=18% Similarity=0.180 Sum_probs=184.9
Q ss_pred HHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC---CCCccceeEEEEeCCee
Q 007088 300 DLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR---HRNLVPLLGFCVAKKER 376 (618)
Q Consensus 300 ~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~ 376 (618)
+.+...+.|.+.+.||+|+||.||+|...+|+.||+|+-+..... +|+--.+++.||+ -+-|..+...+.-.+..
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 334455678899999999999999999888999999998765433 2333334444554 24455555556667778
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC-------CCCceEE
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD-------GDFEPKL 449 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-------~~~~~kl 449 (618)
++|+||.+.|||.+++... ..++|...+.+..|+++-+++||.. +|||+||||+|.||. +..-++|
T Consensus 770 ~lv~ey~~~Gtlld~~N~~----~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTN----KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred eeeeeccccccHHHhhccC----CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence 9999999999999999844 4599999999999999999999999 999999999999994 2345899
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
+|||.+..+..-.. .+...+.++|-.+-.+|+..|..++.+.|.|.+..+++-|+.|+..-. .
T Consensus 843 IDfG~siDm~lfp~--~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~-~-------------- 905 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPD--GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEV-K-------------- 905 (974)
T ss_pred EecccceeeeEcCC--CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHh-c--------------
Confidence 99999976543111 133445668999999999999999999999999999999999986420 0
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
++.. ..++..+..-...+...+++. .+|..|-..=|...++...++++..+.
T Consensus 906 -----~g~~-~~~~~~~~Ry~~~~~W~~~F~---~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 906 -----NGSS-WMVKTNFPRYWKRDMWNKFFD---LLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred -----CCcc-eeccccchhhhhHHHHHHHHH---HHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 0000 000110000001122334555 455555555588888888888876654
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=1.6e-19 Score=178.42 Aligned_cols=232 Identities=17% Similarity=0.186 Sum_probs=145.8
Q ss_pred CCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCC----------CCccceeEEEEe
Q 007088 308 FSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRH----------RNLVPLLGFCVA 372 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~~ 372 (618)
+...+.||.|+++.||.++.. +++.+|+|++... ....+++.+|.-....+.+ -.++-.++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 344678999999999999964 5899999988432 2334566666655544322 223333333221
Q ss_pred C------------C-----eeEEEEeecCCCccccccCC---CCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceec
Q 007088 373 K------------K-----ERLLVYSYLENGTLYDKLHP---AEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432 (618)
Q Consensus 373 ~------------~-----~~~lV~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 432 (618)
. . ..+++|+-+. ++|.+++.. .......+....++.+..|+++.+++||+. |++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 1 1 2367788774 488777542 111112344556677889999999999999 99999
Q ss_pred CCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCC--------CCCCCccchHHHHHHHHH
Q 007088 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT--------LVATPKGDVYSFGVVLLE 504 (618)
Q Consensus 433 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDVwS~Gvil~e 504 (618)
||||+|++++.+|.++|+||+.....+..... ...+..|.+||.... -.++.+.|.|++|+++|.
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeec-------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 99999999999999999999887765432111 114577999996532 357889999999999999
Q ss_pred HHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCC
Q 007088 505 LITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKER 573 (618)
Q Consensus 505 lltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R 573 (618)
|.+|+.||........... .+. . ..+.++.+..||..+|+.||.+|
T Consensus 243 lWC~~lPf~~~~~~~~~~~---------------------~f~-~-C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 243 LWCGRLPFGLSSPEADPEW---------------------DFS-R-CRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHSS-STCCCGGGSTSGG---------------------GGT-T-SS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHccCCCCCCCccccccc---------------------cch-h-cCCcCHHHHHHHHHHccCCcccC
Confidence 9999999986433211100 111 1 12556677778889999999988
No 423
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.9e-20 Score=194.63 Aligned_cols=184 Identities=26% Similarity=0.286 Sum_probs=156.0
Q ss_pred EeecCCeeEEEEE----eCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEeecCC
Q 007088 314 IGTGRTGATYIAM----LPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 314 lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+|+|.||.|+++. .+.|..+|+|..++.. ........|..++...+ ||.+|++...+..+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999876 3457889999886532 11114556778888886 99999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|.|...+..... +.+.....+...++-+++++|+. +|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 82 g~lft~l~~~~~----f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 82 GDLFTRLSKEVM----FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred chhhhccccCCc----hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 999998876643 67777788888999999999999 9999999999999999999999999999876432221
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHL 514 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~ 514 (618)
+||..|||||++. ....++|.||||++++||+||..||..
T Consensus 154 -------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 154 -------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred -------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 5899999999988 457899999999999999999999975
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=1.9e-18 Score=165.45 Aligned_cols=136 Identities=17% Similarity=0.169 Sum_probs=105.7
Q ss_pred CCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccC-ccCHHHHHHHHHHHhcC-----CCCCccceeEEEEeCC---eeE-
Q 007088 308 FSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDS-QHSEKEFLSEINTLGSV-----RHRNLVPLLGFCVAKK---ERL- 377 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~- 377 (618)
++..+.||+|+||.||. .-.++.. +||++... ....+.+.+|+.+++++ +||||++++|++.++. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34467899999999996 3334444 68887643 33456799999999999 5799999999998873 333
Q ss_pred EEEee--cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHH-HHHHhCCCCCceecCCCCCCeeeCC----CCceEEc
Q 007088 378 LVYSY--LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGL-AWLHHNCNPRIIHRNISSKCILLDG----DFEPKLS 450 (618)
Q Consensus 378 lV~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~ 450 (618)
+|+|| +++|+|.+++.... +++. ..++.|++.++ +|||++ +|+||||||+|||++. ++.++|+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~-----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR-----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEecCCCCcchhHHHHHHccc-----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 78999 56799999996532 4544 35678888777 999999 9999999999999974 3479999
Q ss_pred ccCcc
Q 007088 451 DFGLA 455 (618)
Q Consensus 451 DfG~a 455 (618)
||+.+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95444
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.77 E-value=2.1e-18 Score=169.20 Aligned_cols=145 Identities=13% Similarity=0.108 Sum_probs=113.1
Q ss_pred HhhccCCCCcEEeecCCeeEEEEE--eCCCcEEEEEEeccCcc-------------------------CHHHHHHHHHHH
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAM--LPGGCFIMIKRLEDSQH-------------------------SEKEFLSEINTL 355 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~-------------------------~~~~~~~E~~~l 355 (618)
+-..-|.+.+.||+|++|.||+|. ..+|+.||+|+++.... ....+..|+..+
T Consensus 25 ~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L 104 (237)
T smart00090 25 NRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNL 104 (237)
T ss_pred hcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHH
Confidence 333457889999999999999998 57899999999864321 012356899999
Q ss_pred hcCCCCC--ccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC-ceec
Q 007088 356 GSVRHRN--LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR-IIHR 432 (618)
Q Consensus 356 ~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~ 432 (618)
.++.+.. +.+++++ ...++||||+++++|....... ..+.......++.|++.++++||+. + ++||
T Consensus 105 ~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~ 173 (237)
T smart00090 105 QRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD----VEPEEEEEFELYDDILEEMRKLYKE---GELVHG 173 (237)
T ss_pred HHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccccc----CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeC
Confidence 9997533 3444443 2358999999998887765322 2355666789999999999999999 9 9999
Q ss_pred CCCCCCeeeCCCCceEEcccCcccccC
Q 007088 433 NISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 433 Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
||||+||+++ ++.++|+|||.+....
T Consensus 174 Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 174 DLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred CCChhhEEEE-CCCEEEEEChhhhccC
Confidence 9999999999 8899999999987544
No 426
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.8e-18 Score=170.82 Aligned_cols=200 Identities=18% Similarity=0.163 Sum_probs=139.5
Q ss_pred CCCCccceeEEEEeC---------------------------CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHH
Q 007088 359 RHRNLVPLLGFCVAK---------------------------KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIA 411 (618)
Q Consensus 359 ~h~niv~l~~~~~~~---------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~ 411 (618)
+|||||++.++|.+. ...|+||..++. +|.+++..+. .+.....-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-----~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-----RSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-----CchHHHHHHH
Confidence 599999999887642 235899998876 9999997654 5667778899
Q ss_pred HHHHHHHHHHHhCCCCCceecCCCCCCeee--CCCC--ceEEcccCcccccCCC--CCcccccccCCCCcccccCCCCCC
Q 007088 412 IGSARGLAWLHHNCNPRIIHRNISSKCILL--DGDF--EPKLSDFGLARLMNPV--DTHLSTFVNGEFGDLGYVAPEYPR 485 (618)
Q Consensus 412 ~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~--~~kl~DfG~a~~~~~~--~~~~~~~~~~~~gt~~y~aPE~~~ 485 (618)
.|+++|+.|||++ ||.|||+|++|||+ |+|+ .+.|+|||.+---+.. ............|...-||||+..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999999 99999999999999 3443 4789999977432211 111111111233777889999876
Q ss_pred CCCC------CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHH
Q 007088 486 TLVA------TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFL 559 (618)
Q Consensus 486 ~~~~------~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 559 (618)
..+- -.|+|.|+.|.+.||+++...||+....... +...+.+ .. -+ ..++..+..+.
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L---~~r~Yqe-----~q-----LP----alp~~vpp~~r 487 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL---DTRTYQE-----SQ-----LP----ALPSRVPPVAR 487 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee---chhhhhh-----hh-----CC----CCcccCChHHH
Confidence 5431 3589999999999999999999986322100 0111100 00 01 11223344567
Q ss_pred HHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 560 RVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 560 ~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
+++...|+.||.+|++..-....|+
T Consensus 488 qlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 488 QLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHHhcCCccccCCccHHHhHHH
Confidence 7888999999999999877666654
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.4e-17 Score=159.76 Aligned_cols=145 Identities=19% Similarity=0.182 Sum_probs=113.5
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc-----------------------CHHHHHHHHHHH
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH-----------------------SEKEFLSEINTL 355 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~E~~~l 355 (618)
.++......|...+.||+|+||.||++...+|+.||||++..... ....+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444445888899999999999999988899999998754321 112356788889
Q ss_pred hcCCCCC--ccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecC
Q 007088 356 GSVRHRN--LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433 (618)
Q Consensus 356 ~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 433 (618)
.++.|++ +.+.++ ....++||||+++++|.+.... .....++.+++.++.++|+. +++|||
T Consensus 88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~D 150 (198)
T cd05144 88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGD 150 (198)
T ss_pred HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCC
Confidence 8887774 444443 2445899999999998765431 23467889999999999998 999999
Q ss_pred CCCCCeeeCCCCceEEcccCcccccCC
Q 007088 434 ISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 434 lkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
|||+||++++++.++|+|||.+.....
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccCCC
Confidence 999999999999999999999976543
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=1.9e-17 Score=160.53 Aligned_cols=133 Identities=21% Similarity=0.286 Sum_probs=113.0
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCcc---------CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH---------SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+.||+|++|.||+|.. +|..|++|+...... ....+.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 667788997654221 123577899999999999998888887777888999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
++|++|.+++.... + .+..++.+++.+|.++|+. +++|||++|+||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999875321 2 7889999999999999999 999999999999999 78899999998864
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.72 E-value=2.2e-17 Score=182.19 Aligned_cols=141 Identities=18% Similarity=0.239 Sum_probs=114.0
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc--------cCHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ--------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 373 (618)
......|...+.||+|+||.||++.+.+...++.++..+.. ...+.+.+|++++.+++|++++....++.+.
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 33445567789999999999999987555444333332211 1134588999999999999999888888877
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
+..++||||+++++|.+++. ....++.|++++|.|||+. +++||||||+||++ .++.++|+|||
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFG 472 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFG 472 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCc
Confidence 78899999999999988774 3467899999999999999 99999999999999 67799999999
Q ss_pred ccccc
Q 007088 454 LARLM 458 (618)
Q Consensus 454 ~a~~~ 458 (618)
+++..
T Consensus 473 la~~~ 477 (535)
T PRK09605 473 LGKYS 477 (535)
T ss_pred ccccC
Confidence 98753
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.72 E-value=4.1e-18 Score=186.90 Aligned_cols=210 Identities=20% Similarity=0.212 Sum_probs=139.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.+|+.++.|..|+||.||..+++ ..+.+|+|+=++.- +.+- ++.....|.+ |
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-----ilRn--ilt~a~npfv---------------v----- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----ILRN--ILTFAGNPFV---------------V----- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccch-----hhhc--cccccCCcce---------------e-----
Confidence 57888999999999999999864 46777875422211 1010 2222223332 2
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC--
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD-- 462 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~-- 462 (618)
|+-...++..+. ++. +++.+++|||+. +|+|||+||+|.+|+.-|++|+.|||+++......
T Consensus 136 -gDc~tllk~~g~----lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 -GDCATLLKNIGP----LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred -chhhhhcccCCC----Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 344444443222 332 237899999999 99999999999999999999999999987532110
Q ss_pred --------Cccccc-ccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 463 --------THLSTF-VNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 463 --------~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
.....+ -...+||+.|+|||++..+.|+..+|+|++|+|+||.+.|..||..+..++.+...+...+...
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp- 278 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP- 278 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc-
Confidence 000111 1234799999999999999999999999999999999999999998765443322222111111
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH 574 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 574 (618)
+.......+..+++.+.|+.+|.+|-
T Consensus 279 ---------------E~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 279 ---------------EEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ---------------ccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 01112223445555588999999994
No 431
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=4.5e-17 Score=156.38 Aligned_cols=129 Identities=22% Similarity=0.323 Sum_probs=106.6
Q ss_pred EEeecCCeeEEEEEeCCCcEEEEEEeccCc--c-------CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 313 IIGTGRTGATYIAMLPGGCFIMIKRLEDSQ--H-------SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 313 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.||+|++|.||+|.. ++..|++|...... . ...++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999985 56789999864321 1 1245778999999999888766666666777789999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+|++|.+.+.... ..++.+++.+|.+||+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 80 ~g~~l~~~~~~~~-----------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN-----------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH-----------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988775321 07899999999999999 999999999999999 78999999998865
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.67 E-value=1.1e-17 Score=172.24 Aligned_cols=126 Identities=26% Similarity=0.348 Sum_probs=106.6
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..|+.|++|...+|.+++...+. ....++...+.++.|++.|+.| + +.+|||+||.||+...+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 46899999999999999975442 2457888999999999999999 6 899999999999999999999999999
Q ss_pred ccccCCCCCc--ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh
Q 007088 455 ARLMNPVDTH--LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 507 (618)
Q Consensus 455 a~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt 507 (618)
.......... .........||..||+||.+.+..|+.|+||||+|++++|++.
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 9876554311 1112234459999999999999999999999999999999997
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.65 E-value=1.3e-15 Score=138.73 Aligned_cols=136 Identities=18% Similarity=0.094 Sum_probs=115.6
Q ss_pred CCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCC--CCccceeEEEEeCCeeEEEEeecCCCc
Q 007088 310 KNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH--RNLVPLLGFCVAKKERLLVYSYLENGT 387 (618)
Q Consensus 310 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~gs 387 (618)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+..+..++| .++++++++....+..+++|||++++.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 35789999999999999755 7899999876544 5678999999999976 589999998888888999999999877
Q ss_pred cccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 388 LYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 388 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.+...
T Consensus 80 ~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 80 LDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 7654 45667788999999999999864447999999999999999899999999988753
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.64 E-value=4e-16 Score=148.19 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=99.4
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCH---HH----------------------HHHHHHHHhcCCCCC--c
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE---KE----------------------FLSEINTLGSVRHRN--L 363 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~----------------------~~~E~~~l~~l~h~n--i 363 (618)
.+.||+|+||.||+|...+++.||||+++...... .. ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999986532111 11 134555566654332 4
Q ss_pred cceeEEEEeCCeeEEEEeecCCCccccc-cCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeee
Q 007088 364 VPLLGFCVAKKERLLVYSYLENGTLYDK-LHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILL 441 (618)
Q Consensus 364 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll 441 (618)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. . +|+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 444443 246899999998654322 11111 11 5678899999999999999 7 99999999999999
Q ss_pred CCCCceEEcccCcccccCC
Q 007088 442 DGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~ 460 (618)
+ ++.++++|||.+.....
T Consensus 149 ~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 149 D-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred E-CCcEEEEECcccccccC
Confidence 9 88999999999976543
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.61 E-value=5.3e-15 Score=145.46 Aligned_cols=135 Identities=19% Similarity=0.246 Sum_probs=105.4
Q ss_pred CcEEe-ecCCeeEEEEEeCCCcEEEEEEeccCc--------------cCHHHHHHHHHHHhcCCCCCc--cceeEEEEeC
Q 007088 311 NNIIG-TGRTGATYIAMLPGGCFIMIKRLEDSQ--------------HSEKEFLSEINTLGSVRHRNL--VPLLGFCVAK 373 (618)
Q Consensus 311 ~~~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 373 (618)
...|| .||.|+||.+... +..+++|++.... .....+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45788 8999999999885 6678888885311 123457889999999998875 6777765433
Q ss_pred C----eeEEEEeecCC-CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceE
Q 007088 374 K----ERLLVYSYLEN-GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPK 448 (618)
Q Consensus 374 ~----~~~lV~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 448 (618)
. ..++||||+++ .+|.+++... +++.. .+.+++.++.+||+. ||+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 23599999997 6888887542 24433 357899999999999 999999999999999988999
Q ss_pred EcccCccccc
Q 007088 449 LSDFGLARLM 458 (618)
Q Consensus 449 l~DfG~a~~~ 458 (618)
|+|||.+...
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999988753
No 436
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=2.4e-16 Score=173.46 Aligned_cols=253 Identities=23% Similarity=0.319 Sum_probs=186.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC--CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP--GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 379 (618)
..|...+.||+|.|+.|-..... ....+|+|.+.... ...+....|..+-..+. |+|++.+++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 35666777999999999888753 34566777665432 23344555777777776 99999999999999999999
Q ss_pred EeecCCCcccccc-CCCCCCCcCCCHHHHHHHHHHHHHHHHHHH-hCCCCCceecCCCCCCeeeCCCC-ceEEcccCccc
Q 007088 380 YSYLENGTLYDKL-HPAEHEVMHMDWPLRLRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDGDF-EPKLSDFGLAR 456 (618)
Q Consensus 380 ~e~~~~gsL~~~l-~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~a~ 456 (618)
++|..++++.+.+ +... ...+......++.|+..++.|+| .. ++.|||+||+|.+++..+ ..+++|||+|.
T Consensus 100 ~~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cCcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 9999999999988 4332 13566677889999999999999 77 999999999999999999 99999999998
Q ss_pred ccCC-CCCcccccccCCCC-cccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 457 LMNP-VDTHLSTFVNGEFG-DLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 457 ~~~~-~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
.... .... ......+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+........ ....|....
T Consensus 174 ~~~~~~g~~--~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~- 247 (601)
T KOG0590|consen 174 AYRNKNGAE--RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---RYSSWKSNK- 247 (601)
T ss_pred cccccCCcc--eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---cceeecccc-
Confidence 7765 2222 22334557 9999999998874 456789999999999999999999986544321 111121110
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVY 580 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 580 (618)
... ....+........++..+++..+|..|.+.+++-
T Consensus 248 --~~~--------~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 248 --GRF--------TQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred --ccc--------ccCccccCChhhhhcccccccCCchhcccccccc
Confidence 000 0001122223445566689999999999988874
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=1.1e-14 Score=141.13 Aligned_cols=161 Identities=22% Similarity=0.314 Sum_probs=121.8
Q ss_pred HHHHHHhcCCCCCccceeEEEEeCC-----eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhC
Q 007088 350 SEINTLGSVRHRNLVPLLGFCVAKK-----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHN 424 (618)
Q Consensus 350 ~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~ 424 (618)
.-..-+-++.|.|||++..|+.+.. +..++.||+..|++.++|++.......+......+|+.||..||.|||+
T Consensus 116 ~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs- 194 (458)
T KOG1266|consen 116 AVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS- 194 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-
Confidence 3344556667999999999987643 4679999999999999998776666778888999999999999999999
Q ss_pred CCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHH
Q 007088 425 CNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLE 504 (618)
Q Consensus 425 ~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~e 504 (618)
|.|+|+|+++..+-|++..+|-+|+.----...................+-++|.+||+-.....+.++|||+||...+|
T Consensus 195 ~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 195 CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred cCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 57889999999999999999888875321111000000000000111225689999999887788889999999999999
Q ss_pred HHhCCCC
Q 007088 505 LITGERP 511 (618)
Q Consensus 505 lltG~~P 511 (618)
|..+..-
T Consensus 275 mailEiq 281 (458)
T KOG1266|consen 275 MAILEIQ 281 (458)
T ss_pred HHHheec
Confidence 9887643
No 438
>PLN03150 hypothetical protein; Provisional
Probab=99.51 E-value=1.7e-14 Score=161.11 Aligned_cols=93 Identities=41% Similarity=0.681 Sum_probs=89.0
Q ss_pred CCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCcccccccccccccc
Q 007088 107 SLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSV 186 (618)
Q Consensus 107 ~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l 186 (618)
.++.|+|++|.|+|.+|..+.. |++|+.|+|++|+|+|.+|..+++|++|+.|+|++|+|+|.+|..++++++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~-L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISK-LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhC-CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 5889999999999999999976 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCc
Q 007088 187 ASNLLTGPVPSFAN 200 (618)
Q Consensus 187 ~~N~l~g~ip~~~~ 200 (618)
++|+|+|.+|....
T Consensus 498 s~N~l~g~iP~~l~ 511 (623)
T PLN03150 498 NGNSLSGRVPAALG 511 (623)
T ss_pred cCCcccccCChHHh
Confidence 99999999998544
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=3e-13 Score=144.49 Aligned_cols=141 Identities=18% Similarity=0.150 Sum_probs=100.6
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccC-----------------------------------------HHHHH
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHS-----------------------------------------EKEFL 349 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~~ 349 (618)
.+.||+|++|.||+|++.+|+.||||+.+..-.. +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 4689999999999999999999999998643100 00244
Q ss_pred HHHHHHhcCC----CCCccceeEEEE-eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHH-HHHHHHh
Q 007088 350 SEINTLGSVR----HRNLVPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR-GLAWLHH 423 (618)
Q Consensus 350 ~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~-~L~~LH~ 423 (618)
+|...+.+++ |.+-+.+-.++. .....++||||++|++|.+....... .. .+..++.+++. .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~---~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA---GL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc---CC---CHHHHHHHHHHHHHHHHHh
Confidence 5555555542 322233322332 23457999999999999887643211 12 23456666666 4788999
Q ss_pred CCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 424 NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 424 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
. |++|+|+||.||+++.+++++++|||++..+..
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 8 999999999999999999999999999987653
No 440
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.43 E-value=1.2e-14 Score=128.22 Aligned_cols=127 Identities=24% Similarity=0.395 Sum_probs=112.5
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
...++.|.|++|.++ .+|+.|..|.+|+.|+|++|++. .+|.++.+ |++|++|+++-|++. .+|..||.++.|+.|
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~iss-l~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISS-LPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhh-chhhhheecchhhhh-cCccccCCCchhhhh
Confidence 467899999999999 89999999999999999999999 89999987 999999999999999 899999999999999
Q ss_pred EccCcccCC-CCCccccccccccccccccccccCCCCCCCcc-ccccccccCC
Q 007088 161 KLNNNRFTG-KIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANN 211 (618)
Q Consensus 161 ~l~~N~l~g-~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n 211 (618)
||+.|+++- .+|..|..+..|+.|+|++|.|.-..|....+ ++.-+.+..|
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccC
Confidence 999999975 47999999999999999999998777765543 3444444444
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.40 E-value=1.7e-12 Score=140.38 Aligned_cols=144 Identities=15% Similarity=0.180 Sum_probs=95.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC-CcEEEEEEeccCcc---------------------------C--------HH---
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQH---------------------------S--------EK--- 346 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---------------------------~--------~~--- 346 (618)
.+|+. +.||+|++|.||+|++.+ |+.||||+.+..-. . .+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 789999999999999877 99999999964310 0 01
Q ss_pred ---HHHHHHHHHhcCC----CCCccceeEEEEe-CCeeEEEEeecCCCccccc--cCCCCCCCcCCCHHHHHHHHHHHHH
Q 007088 347 ---EFLSEINTLGSVR----HRNLVPLLGFCVA-KKERLLVYSYLENGTLYDK--LHPAEHEVMHMDWPLRLRIAIGSAR 416 (618)
Q Consensus 347 ---~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lV~e~~~~gsL~~~--l~~~~~~~~~l~~~~~~~i~~~i~~ 416 (618)
++.+|+..+.+++ +.+.+.+-.++.+ ....++||||++|+.+.+. +...+.....+.......++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 2344554444442 3444444444433 4567899999999999774 2222111112222223333333
Q ss_pred HHHHHHhCCCCCceecCCCCCCeeeCCCC----ceEEcccCcccccCC
Q 007088 417 GLAWLHHNCNPRIIHRNISSKCILLDGDF----EPKLSDFGLARLMNP 460 (618)
Q Consensus 417 ~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfG~a~~~~~ 460 (618)
++.. |++|+|+||.||+++.++ +++++|||++..++.
T Consensus 276 ----if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 ----VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ----HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3446 999999999999999888 999999999976643
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.39 E-value=1.5e-12 Score=121.31 Aligned_cols=131 Identities=16% Similarity=0.113 Sum_probs=97.8
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCcc-ceeEEEEeCCeeEEEEeecCCCccc
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLV-PLLGFCVAKKERLLVYSYLENGTLY 389 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lV~e~~~~gsL~ 389 (618)
.+.++.|.++.||++... +..|++|...........+.+|+.++..+.+.+++ +++.+. ....++||||++|.++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 456889999999999875 67899999866543334567899999988655544 455443 33458999999998876
Q ss_pred cccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--CCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 390 DKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC--NPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 390 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+. . . ....++.+++++|+.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~----~-----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TE----D-----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc----c-----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 53 0 0 11345678999999999982 12359999999999999 66899999998763
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36 E-value=7.3e-13 Score=139.56 Aligned_cols=249 Identities=20% Similarity=0.193 Sum_probs=178.8
Q ss_pred cCCCCcEEee--cCCeeEEEEEe---CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeE
Q 007088 307 SFSKNNIIGT--GRTGATYIAML---PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 307 ~y~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 377 (618)
.|.+.+.+|. |.+|.||.+.. .++..+|+|+-+.. ......=.+|+....++ .|+|.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566788999 99999999985 46788999884321 12222234666666667 4999999999999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHH----HHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR----GLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDF 452 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Df 452 (618)
+-+|++. .+|.++.+... ..++....+.+..+..+ |+.++|+. +++|-|+||.||++..+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~~---~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPC---NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhccc---ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 9999985 58888876544 23666777788888888 99999999 99999999999999999 88999999
Q ss_pred CcccccCCCCCcccccccCC-CCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGE-FGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|+...+.............. .|...|++||...+ .++.++|+|++|.++.+..+|..+...... ..|...
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~--------~~W~~~ 338 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN--------SSWSQL 338 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC--------CCcccc
Confidence 99988876543222221122 47788999998754 568999999999999999998877654311 111110
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
- ... +..++.......+...+..+++.+|..|++.+.+..
T Consensus 339 r----~~~------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 R----QGY------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred c----ccc------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 000 111111122233344777899999999999887754
No 444
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.30 E-value=1.2e-13 Score=122.02 Aligned_cols=130 Identities=26% Similarity=0.415 Sum_probs=108.4
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCc-cccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLS-GSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNV 159 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~-g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~ 159 (618)
..++..|++.-|+|. .+|..||.++.|+.|||++|+++ ..+|..++. ++.|+.|+|+.|.|. .+|..+++|++|+.
T Consensus 78 l~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~-m~tlralyl~dndfe-~lp~dvg~lt~lqi 154 (264)
T KOG0617|consen 78 LPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFY-MTTLRALYLGDNDFE-ILPPDVGKLTNLQI 154 (264)
T ss_pred chhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhH-HHHHHHHHhcCCCcc-cCChhhhhhcceeE
Confidence 346777788778877 78888999999999999998886 468888886 888999999999998 89999999999999
Q ss_pred EEccCcccCCCCCccccccccccccccccccccCCCCCCCccc----cccccccCCCCC
Q 007088 160 LKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVN----FTAEDFANNSGL 214 (618)
Q Consensus 160 l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~----~~~~~~~~n~~~ 214 (618)
|.+..|.+- ++|.+++.++.|+.|++.+|+|+-..|....+. -......+|||.
T Consensus 155 l~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 155 LSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred EeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 999999998 799999999999999999999998888765532 223355666654
No 445
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.30 E-value=3.3e-11 Score=113.47 Aligned_cols=137 Identities=16% Similarity=0.132 Sum_probs=100.4
Q ss_pred CcEEeecCCeeEEEEEeCC-------CcEEEEEEeccCc-----------------------cCHHHHH----HHHHHHh
Q 007088 311 NNIIGTGRTGATYIAMLPG-------GCFIMIKRLEDSQ-----------------------HSEKEFL----SEINTLG 356 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-----------------------~~~~~~~----~E~~~l~ 356 (618)
...||.|--+.||.|...+ +..+|||+++.+. ...+.+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998543 5799999884210 0012233 8999999
Q ss_pred cCCC--CCccceeEEEEeCCeeEEEEeecCCCcccc-ccCCCCCCCcCCCHHHHHHHHHHHHHHHHHH-HhCCCCCceec
Q 007088 357 SVRH--RNLVPLLGFCVAKKERLLVYSYLENGTLYD-KLHPAEHEVMHMDWPLRLRIAIGSARGLAWL-HHNCNPRIIHR 432 (618)
Q Consensus 357 ~l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~ 432 (618)
++.. -++.+++++ ...++||||+.++.+.. .+.. ..++..+...+..+++.+|.+| |+. +|+|+
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHG 149 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHA 149 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 9853 466677765 45689999997654322 2221 1244556677889999999999 787 99999
Q ss_pred CCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 433 NISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 433 Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||++.||+++ ++.++|+|||.+.....
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 9999999997 46899999998876543
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.22 E-value=1.3e-10 Score=113.21 Aligned_cols=142 Identities=20% Similarity=0.261 Sum_probs=112.5
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc--CHHHHHHHHHHHhcCCC--CCccceeEEEEeCC---eeEEEEeec
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH--SEKEFLSEINTLGSVRH--RNLVPLLGFCVAKK---ERLLVYSYL 383 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~---~~~lV~e~~ 383 (618)
.+.|+.|.++.||++...+|..+++|....... ....+.+|.++++.+++ .++.+++.+..... ..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 356899999999999987778999999865432 45578899999999975 34677787776542 568999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC-------------------------------------- 425 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 425 (618)
+|.++.+.+.. ..++......++.+++++|.+||+..
T Consensus 83 ~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 83 DGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 99988876642 23677888889999999999998631
Q ss_pred ---------------CCCceecCCCCCCeeeCC--CCceEEcccCcccc
Q 007088 426 ---------------NPRIIHRNISSKCILLDG--DFEPKLSDFGLARL 457 (618)
Q Consensus 426 ---------------~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~a~~ 457 (618)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 135799999999999998 66689999998764
No 447
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.22 E-value=4.5e-13 Score=133.15 Aligned_cols=122 Identities=19% Similarity=0.314 Sum_probs=96.9
Q ss_pred EEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCc-CCCCCcEEEccC
Q 007088 86 NIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLA-NCTFLNVLKLNN 164 (618)
Q Consensus 86 ~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~-~l~~L~~l~l~~ 164 (618)
.||...|-| +++|++++.|.+|..|||..|++. .+| ++.+ ++.|+.|+++.|++. .+|.+.+ +|++|.+|||.+
T Consensus 187 ~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~g-cs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRd 261 (565)
T KOG0472|consen 187 HLDCNSNLL-ETLPPELGGLESLELLYLRRNKIR-FLP-EFPG-CSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRD 261 (565)
T ss_pred hcccchhhh-hcCChhhcchhhhHHHHhhhcccc-cCC-CCCc-cHHHHHHHhcccHHH-hhHHHHhcccccceeeeccc
Confidence 344433333 467777777777777777777777 677 4554 677777777777777 7777766 899999999999
Q ss_pred cccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCCC
Q 007088 165 NRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNSG 213 (618)
Q Consensus 165 N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~~ 213 (618)
|++. ++|.++..+.+|.+||+|+|.+++..++..++.+..+.+.|||.
T Consensus 262 Nklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnlhL~~L~leGNPl 309 (565)
T KOG0472|consen 262 NKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNLHLKFLALEGNPL 309 (565)
T ss_pred cccc-cCchHHHHhhhhhhhcccCCccccCCcccccceeeehhhcCCch
Confidence 9999 89999999999999999999999999998888888888999963
No 448
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.19 E-value=1.2e-11 Score=130.40 Aligned_cols=248 Identities=19% Similarity=0.184 Sum_probs=173.9
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe--CCCcEEEEEEeccCccC---HHHHHHHHHHHhcC-CCCCccceeEEEEeCCee
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML--PGGCFIMIKRLEDSQHS---EKEFLSEINTLGSV-RHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 376 (618)
..+.+|..+..||.|.|+.|+.... .++..|++|.+.+.-.. ...-..|+.+...+ .|.++++....+...++.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3456788899999999999999873 56889999988654311 11123566555555 588899888877777788
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEcccCcc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDFGLA 455 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~a 455 (618)
|+--||++++++...+... ..++...++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.+
T Consensus 342 ~ip~e~~~~~s~~l~~~~~----~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTS----QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cCchhhhcCcchhhhhHHH----HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 8999999999887665222 3477788899999999999999999 99999999999999886 78899999998
Q ss_pred cccCCCCCcccccccCCCCcccc-cCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGY-VAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
..+.-...... ..+..| .+|+......+..+.|+||||..+.|.+++...-.... +|.....
T Consensus 415 t~~~~~~~~~~------~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~----------~~~~i~~- 477 (524)
T KOG0601|consen 415 TRLAFSSGVFH------HIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV----------QSLTIRS- 477 (524)
T ss_pred cccceeccccc------ccccccccchhhccccccccccccccccccccccccCcccCcccc----------cceeeec-
Confidence 75332111110 023334 35666667788899999999999999999875432211 1111100
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
...... ......+..+...+...++..||.+.+.....+-
T Consensus 478 ----------~~~p~~-~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 478 ----------GDTPNL-PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred ----------ccccCC-CchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 000000 1112455666668888999999999887655443
No 449
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.19 E-value=2.9e-12 Score=133.55 Aligned_cols=109 Identities=29% Similarity=0.446 Sum_probs=80.3
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
...++.||||+|+|. ..|..+.+-+++-.|+||+|++. +||..++-+|+-|-+||||+|+|. .+|+.+..|..|++|
T Consensus 102 l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL 178 (1255)
T KOG0444|consen 102 LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTL 178 (1255)
T ss_pred cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhh
Confidence 345777888888887 67777777788888888888887 788877777888888888888887 778777777777777
Q ss_pred EccCcccC-------------------------CCCCcccccccccccccccccccc
Q 007088 161 KLNNNRFT-------------------------GKIPPQLGLLNRIKTFSVASNLLT 192 (618)
Q Consensus 161 ~l~~N~l~-------------------------g~~p~~l~~~~~L~~l~l~~N~l~ 192 (618)
+||+|.+. ..+|.++..+.+|..+++|.|+|.
T Consensus 179 ~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp 235 (1255)
T KOG0444|consen 179 KLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP 235 (1255)
T ss_pred hcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC
Confidence 77777543 245566666666666666666664
No 450
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.18 E-value=2.9e-10 Score=121.19 Aligned_cols=165 Identities=16% Similarity=0.187 Sum_probs=124.4
Q ss_pred eCCCcEEEEEEeccCcc-CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHH
Q 007088 327 LPGGCFIMIKRLEDSQH-SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWP 405 (618)
Q Consensus 327 ~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~ 405 (618)
..++.+|.|..++.... ......+-++.|+.+|||||+++++.+...+..|+|+|-+. .|..++.. +...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l~~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------LGKE 104 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------hHHH
Confidence 55778888888765443 23446778889999999999999999999999999999884 45555543 2345
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCC
Q 007088 406 LRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR 485 (618)
Q Consensus 406 ~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 485 (618)
.....+.||+.||.|||+.| +++|++|.-+-|+++..|+.||++|.++............ ..--..|..|+.+.
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~----~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKS----LYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccccc----chhhhcccChhhcC
Confidence 56677899999999999776 8999999999999999999999999888655432210000 01123466666543
Q ss_pred CCCCCCccchHHHHHHHHHHHhC
Q 007088 486 TLVATPKGDVYSFGVVLLELITG 508 (618)
Q Consensus 486 ~~~~~~~sDVwS~Gvil~elltG 508 (618)
... ...|.|-||++++|++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 221 456999999999999999
No 451
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.16 E-value=3.6e-12 Score=126.83 Aligned_cols=127 Identities=27% Similarity=0.359 Sum_probs=77.8
Q ss_pred cEEEEEecCCcce-----------------------eeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEee
Q 007088 83 KVLNIRLSDMGLK-----------------------GQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLS 139 (618)
Q Consensus 83 ~v~~l~l~~~~l~-----------------------g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~ 139 (618)
-|+.++++.|++. +.+|..+..+++|+.|+|++|-+. .+|.+.+. +..|+.||+|
T Consensus 389 ~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~-lv~Lq~LnlS 466 (565)
T KOG0472|consen 389 IVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGS-LVRLQTLNLS 466 (565)
T ss_pred ceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhh-hhhhheeccc
Confidence 3888888888654 345566677777777777777777 77777776 7777777777
Q ss_pred CCCCcccCCCCCcCCCCCcEEEccCcccCCCCCcc-ccccccccccccccccccCCCCCCCcc-ccccccccCCCC
Q 007088 140 SNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQ-LGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNSG 213 (618)
Q Consensus 140 ~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~-l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~ 213 (618)
+|+|. .+|..+-.+..|+.+-.++|++. .+|++ +.++.+|.+|||.+|.+.-.+|..... ++..+.+.|||.
T Consensus 467 ~NrFr-~lP~~~y~lq~lEtllas~nqi~-~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 467 FNRFR-MLPECLYELQTLETLLASNNQIG-SVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred ccccc-cchHHHhhHHHHHHHHhcccccc-ccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 77776 55554444444444444444443 33333 556666666666666665544443332 455556666653
No 452
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=3.5e-10 Score=102.79 Aligned_cols=130 Identities=24% Similarity=0.354 Sum_probs=100.3
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEE-EeccCc--------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIK-RLEDSQ--------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK-~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
..+++|+-+.+|.+.+.+.. +++| +.++.. -......+|+.++.+++--.|...+=+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999764444 5555 444321 1124467899999998766666666666777888899999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
++|-.|.+.+... ...++..+-.-+.-||.. ||+|+||.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888888654 245677788888899999 999999999999998774 99999999874
No 453
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.10 E-value=3.7e-10 Score=101.97 Aligned_cols=143 Identities=20% Similarity=0.236 Sum_probs=105.2
Q ss_pred CCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc--------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 310 KNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ--------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 310 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
....+-+|+-+.|+++...+...++-+++.+.. -..++..+|++.+.+++--.|.-..-++.+...-.++||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 467899999999999998554444444554321 234567899999999976666655666777777789999
Q ss_pred ecCC-CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC---ceEEcccCcccc
Q 007088 382 YLEN-GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF---EPKLSDFGLARL 457 (618)
Q Consensus 382 ~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfG~a~~ 457 (618)
|++| -++.+++...... .........++.+|-+.+.-||.. +|+|+||..+||++..++ .+.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~--~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMED--ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccC--cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9976 3677776543321 122223367888999999999999 999999999999996554 358999999853
No 454
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.08 E-value=8.4e-12 Score=136.04 Aligned_cols=129 Identities=26% Similarity=0.368 Sum_probs=112.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..+..|.|.+|.|+...=+-|.+..+|+.|+|++|+|. ++|+....++..|+.|+||+|+|+ .||..+.++..|++|.
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ 436 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLR 436 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHh
Confidence 36778899999999888888999999999999999999 899988888999999999999999 8999999999999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCC-CCCCCc-cccccccccCCCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGP-VPSFAN-VNFTAEDFANNSGL 214 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~-ip~~~~-~~~~~~~~~~n~~~ 214 (618)
..+|++. .+| ++.++++|+.+||+.|+|+-. +|.... .++..++++||.++
T Consensus 437 ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 437 AHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 9999998 678 889999999999999999753 443322 46788899999863
No 455
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.05 E-value=1.4e-10 Score=115.49 Aligned_cols=88 Identities=20% Similarity=0.227 Sum_probs=61.2
Q ss_pred CCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--ccccccc
Q 007088 130 LQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAED 207 (618)
Q Consensus 130 l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~ 207 (618)
|++|+.|+|++|++++.-+.+|..+..|+.|+|..|+|.-.--..|.++++|++|+|.+|+++-.-|.+++ ..+..+.
T Consensus 273 L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~ 352 (498)
T KOG4237|consen 273 LPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLN 352 (498)
T ss_pred cccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeee
Confidence 45566666666666655556666666666666666666533334566778888888888988888886544 2567788
Q ss_pred ccCCCCCCCC
Q 007088 208 FANNSGLCGK 217 (618)
Q Consensus 208 ~~~n~~~c~~ 217 (618)
+.+||+.|.+
T Consensus 353 l~~Np~~CnC 362 (498)
T KOG4237|consen 353 LLSNPFNCNC 362 (498)
T ss_pred hccCcccCcc
Confidence 8899999875
No 456
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.04 E-value=2.1e-11 Score=127.28 Aligned_cols=115 Identities=34% Similarity=0.513 Sum_probs=97.4
Q ss_pred CcEEEEEecCCccee-eCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCC-cCCCCCcE
Q 007088 82 NKVLNIRLSDMGLKG-QFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGL-ANCTFLNV 159 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g-~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~-~~l~~L~~ 159 (618)
.+++++.+..|+|.. .||+.|.+|..|+.||||+|+|. ..|.++-. -+++.+|+||+|++. +||.++ .+|+.|-.
T Consensus 78 p~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~-AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 78 PRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEY-AKNSIVLNLSYNNIE-TIPNSLFINLTDLLF 154 (1255)
T ss_pred hhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhh-hcCcEEEEcccCccc-cCCchHHHhhHhHhh
Confidence 456677777787753 58999999999999999999999 89998864 889999999999999 899874 58999999
Q ss_pred EEccCcccCCCCCccccccccccccccccccccC----CCCCCCc
Q 007088 160 LKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTG----PVPSFAN 200 (618)
Q Consensus 160 l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g----~ip~~~~ 200 (618)
||||+|++. .+|+.+..+..|++|.|++|.|.- .+|+...
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmts 198 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTS 198 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchh
Confidence 999999998 789999999999999999998853 5675443
No 457
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.00 E-value=7.6e-11 Score=130.61 Aligned_cols=209 Identities=21% Similarity=0.229 Sum_probs=143.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCcc----CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQH----SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
..+.+.+.+-+.+|.++.++.+. ...|...+.|....... ..+....+-.++-.-++|-+++..--+.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 45567777788899999998877 22343334443332211 11122223222222344555554444445567789
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|++|+.+++|...++.... .+..-.......+..+++|||.. .+.|+|++|.|++...+++.+++|||.....
T Consensus 882 ~~~~~~~~~~~Skl~~~~~----~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC----LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhHHhccCCchhhhhcCCC----cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 9999999999999887652 44444555666788899999998 7999999999999999999999999844332
Q ss_pred CCC---------------------CCc---cc---ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCC
Q 007088 459 NPV---------------------DTH---LS---TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511 (618)
Q Consensus 459 ~~~---------------------~~~---~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~P 511 (618)
.-. ... .. .......||+.|.+||...+......+|.|+.|++++|.++|.+|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 110 000 00 001123489999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 007088 512 THLTNAPE 519 (618)
Q Consensus 512 f~~~~~~~ 519 (618)
|.......
T Consensus 1035 ~na~tpq~ 1042 (1205)
T KOG0606|consen 1035 FNAETPQQ 1042 (1205)
T ss_pred CCCcchhh
Confidence 98765543
No 458
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=98.98 E-value=5.8e-11 Score=123.36 Aligned_cols=134 Identities=22% Similarity=0.276 Sum_probs=101.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCC---CcCCCCCc
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSG---LANCTFLN 158 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~---~~~l~~L~ 158 (618)
.++..|+|++|+|+.--+.+|.-|+.|+.|+|+.|+++ .|-+..+..+++|+.|||++|.+++.|-.. +..|++|+
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr 395 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR 395 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh
Confidence 46777777777777666666777777788888888777 666666666888999999999999888643 66788999
Q ss_pred EEEccCcccCCCCC-ccccccccccccccccccccCCCCCCC-ccccccccccCCCCCCCC
Q 007088 159 VLKLNNNRFTGKIP-PQLGLLNRIKTFSVASNLLTGPVPSFA-NVNFTAEDFANNSGLCGK 217 (618)
Q Consensus 159 ~l~l~~N~l~g~~p-~~l~~~~~L~~l~l~~N~l~g~ip~~~-~~~~~~~~~~~n~~~c~~ 217 (618)
.|+|.+|++. .|| .+|..+.+|+.|+|.+|.+...-|..+ ..++..+-+..-+.+|.+
T Consensus 396 kL~l~gNqlk-~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 396 KLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDC 455 (873)
T ss_pred heeecCceee-ecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEec
Confidence 9999999998 565 468889999999999999887777533 345555555555566665
No 459
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.97 E-value=3.1e-09 Score=99.70 Aligned_cols=125 Identities=18% Similarity=0.193 Sum_probs=83.7
Q ss_pred eEEEEEeCCCcEEEEEEeccCc--------------c-------------CHHHHHHHHHHHhcCCCC--CccceeEEEE
Q 007088 321 ATYIAMLPGGCFIMIKRLEDSQ--------------H-------------SEKEFLSEINTLGSVRHR--NLVPLLGFCV 371 (618)
Q Consensus 321 ~Vy~~~~~~~~~vavK~~~~~~--------------~-------------~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 371 (618)
.||.|...+|..+|+|+.+... . ......+|.+.|.++... ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899999999999999984310 0 013467899999999765 566776552
Q ss_pred eCCeeEEEEeecC--CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHH-HHhCCCCCceecCCCCCCeeeCCCCceE
Q 007088 372 AKKERLLVYSYLE--NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAW-LHHNCNPRIIHRNISSKCILLDGDFEPK 448 (618)
Q Consensus 372 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivH~Dlkp~NIll~~~~~~k 448 (618)
...+||||++ |..+..+. ... ++......++.+++..+.. +|.. ||+|+||.+.||+++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~-~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLK-DVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHH-HCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHH-hcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3579999998 54444332 221 1123456677888886666 4677 99999999999999988 999
Q ss_pred EcccCcccccC
Q 007088 449 LSDFGLARLMN 459 (618)
Q Consensus 449 l~DfG~a~~~~ 459 (618)
++|||.+....
T Consensus 147 iIDf~qav~~~ 157 (188)
T PF01163_consen 147 IIDFGQAVDSS 157 (188)
T ss_dssp E--GTTEEETT
T ss_pred EEecCcceecC
Confidence 99999887654
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.97 E-value=2.4e-11 Score=126.02 Aligned_cols=123 Identities=28% Similarity=0.409 Sum_probs=109.1
Q ss_pred EEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccC
Q 007088 85 LNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNN 164 (618)
Q Consensus 85 ~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~ 164 (618)
..+.|..|.+. .||..+++|..|++|||+.|+++ .+|..++. |+ |+.|-+++|+++ .+|..++.+..|..||.+.
T Consensus 101 e~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~-lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ 175 (722)
T KOG0532|consen 101 ESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCD-LP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSK 175 (722)
T ss_pred HHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhc-Cc-ceeEEEecCccc-cCCcccccchhHHHhhhhh
Confidence 34455555565 78999999999999999999999 89999986 77 999999999999 8999999999999999999
Q ss_pred cccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCCC
Q 007088 165 NRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNSG 213 (618)
Q Consensus 165 N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~~ 213 (618)
|++. .+|+.++.+.+|+.|++..|++.-..+....+.+-.+||+.|.-
T Consensus 176 nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNki 223 (722)
T KOG0532|consen 176 NEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKI 223 (722)
T ss_pred hhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCce
Confidence 9998 89999999999999999999999888877777788888988864
No 461
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=98.97 E-value=5.8e-11 Score=123.40 Aligned_cols=130 Identities=22% Similarity=0.162 Sum_probs=98.4
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.++..|+|+.|+++..-..++.+|++|+.||||+|.+..--++.+. ..++|+.|+||+|+++--=|.++..|..|++|+
T Consensus 269 ~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Ws-ftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~Ln 347 (873)
T KOG4194|consen 269 EKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWS-FTQKLKELDLSSNRITRLDEGSFRVLSQLEELN 347 (873)
T ss_pred cccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhh-hcccceeEeccccccccCChhHHHHHHHhhhhc
Confidence 4677888888888877777888899999999999998855556554 378899999999999844445678888888888
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc----c-ccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN----V-NFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~----~-~~~~~~~~~n~ 212 (618)
|++|+++-.--..|..+++|+.|||.+|.+++.|-.... + .+..++|.||.
T Consensus 348 Ls~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNq 403 (873)
T KOG4194|consen 348 LSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQ 403 (873)
T ss_pred ccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCce
Confidence 888888855556677888888999999998888764221 1 34455666664
No 462
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.95 E-value=1e-08 Score=102.13 Aligned_cols=140 Identities=15% Similarity=0.059 Sum_probs=101.1
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCc------------cCHHHHHHHHHHHhcCCCCC--ccceeEEEEe-----
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ------------HSEKEFLSEINTLGSVRHRN--LVPLLGFCVA----- 372 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~------------~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~----- 372 (618)
+.+-.-....|++... +|+.|.||+..... .....+.+|...+.++...+ .++++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455444455777666 66789999774322 11124778999988885443 3445666543
Q ss_pred CCeeEEEEeecCCC-ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-------C
Q 007088 373 KKERLLVYSYLENG-TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-------D 444 (618)
Q Consensus 373 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------~ 444 (618)
....++|+|++++- +|.+++..... .+.+...+..++.+++..+.-||.. ||+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23568999999875 78888753211 2355677789999999999999999 9999999999999975 4
Q ss_pred CceEEcccCcccc
Q 007088 445 FEPKLSDFGLARL 457 (618)
Q Consensus 445 ~~~kl~DfG~a~~ 457 (618)
+.+.++||+.+..
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6799999998854
No 463
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.92 E-value=7.2e-09 Score=116.92 Aligned_cols=116 Identities=26% Similarity=0.428 Sum_probs=87.9
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
+.+.|+|++++|+ .+|..+. ++|+.|+|++|+|+ .+|..++ ++|+.|+|++|+|+ .||..+. ++|+.|+|
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 3568999999988 5787664 57999999999999 7888664 57889999999998 6787654 46888888
Q ss_pred cCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCC
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNS 212 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 212 (618)
++|++. .+|..+. ++|+.|++++|+|+. +|.....++..+++++|.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~~sL~~L~Ls~N~ 294 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLPEELRYLSVYDNS 294 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccCc-cccccCCCCcEEECCCCc
Confidence 888887 6777664 578888888888884 554322256667777774
No 464
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.92 E-value=2.4e-08 Score=103.43 Aligned_cols=169 Identities=22% Similarity=0.317 Sum_probs=128.0
Q ss_pred CeeEEEEE-eCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeeEEEEeecCC-Cccccc
Q 007088 319 TGATYIAM-LPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVA----KKERLLVYSYLEN-GTLYDK 391 (618)
Q Consensus 319 ~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~~~~-gsL~~~ 391 (618)
..+.|++. ..||..|++||++..+ ........-++.++++.|+|+|++.+++.. +...++||+|+|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 45789998 5689999999995433 122233456788999999999999998863 3467899999985 567665
Q ss_pred cCCCCC-----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 392 LHPAEH-----------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 392 l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
-..... .....++...|.++.|+..||.++|+. |+.-+-|.+.+|+++.+.+++|+..|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 432211 124477899999999999999999999 999999999999999999999998887765543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~P 511 (618)
... |-+.+ -.+-|.=.||.+++.|.||..-
T Consensus 446 d~~------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT------------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC------------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 221 11111 2367888999999999999654
No 465
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.91 E-value=7.4e-10 Score=102.28 Aligned_cols=104 Identities=27% Similarity=0.401 Sum_probs=33.0
Q ss_pred cEEEEEecCCcceeeCCcCCC-CCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCC-cCCCCCcEE
Q 007088 83 KVLNIRLSDMGLKGQFPRGIE-RCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGL-ANCTFLNVL 160 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~-~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~-~~l~~L~~l 160 (618)
+++.|+|.+|+++ .|. .++ .|++|+.|||++|.++ .|+. +.. |++|+.|+|++|+++ .++..+ ..+++|+.|
T Consensus 20 ~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~~-l~~-L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 20 KLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLEG-LPG-LPRLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---TT------TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred ccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-cccC-ccC-hhhhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 4567777777776 343 455 4677777777777777 5653 433 777777777777777 455444 357777777
Q ss_pred EccCcccCCCC-Ccccccccccccccccccccc
Q 007088 161 KLNNNRFTGKI-PPQLGLLNRIKTFSVASNLLT 192 (618)
Q Consensus 161 ~l~~N~l~g~~-p~~l~~~~~L~~l~l~~N~l~ 192 (618)
+|++|++...- =..+..+++|+.|+|.+|.++
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 77777776311 123556666777776666654
No 466
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.88 E-value=1.4e-09 Score=82.53 Aligned_cols=61 Identities=41% Similarity=0.581 Sum_probs=40.8
Q ss_pred CCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCccc
Q 007088 106 TSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRF 167 (618)
Q Consensus 106 ~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l 167 (618)
++|++|+|++|+++ .||+..+.++++|++|+|++|+++..-|..|.++++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 35667777777777 66666655677777777777777644445567777777777777764
No 467
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.88 E-value=1.2e-07 Score=95.89 Aligned_cols=265 Identities=15% Similarity=0.133 Sum_probs=156.3
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEE----E--EeCC-eeEEEEee
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGF----C--VAKK-ERLLVYSY 382 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~----~--~~~~-~~~lV~e~ 382 (618)
...||+|+.+.+|-.--- .-.+-|+++......+. +.++.|... .||-+-.-+.+ . -+.. ..-+.|+.
T Consensus 16 gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa~~a--qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~ 91 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPAAQA--QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK 91 (637)
T ss_pred CccccCCccceeeecchh--hchhheeecCCCchHHH--HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence 567999999999965321 11245777654322211 223333333 45544331111 1 1112 24577887
Q ss_pred cCCCc-cccccCCC--CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 383 LENGT-LYDKLHPA--EHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gs-L~~~l~~~--~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
+++.. ...+.... +..-....|...++.++.++.+.+.||.. |.+-+|+.++|+|+.+++.+.|.|-..-...
T Consensus 92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~- 167 (637)
T COG4248 92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN- 167 (637)
T ss_pred CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceeec-
Confidence 76531 22222211 11224578999999999999999999999 9999999999999999999999985433322
Q ss_pred CCCCcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhC-CCCCCCCCCCCccccCHHHHHHHHh
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITG-ERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG-~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
..+... ...+|...|.+||... +..-+...|-|.+||++++++.| ++||...........-...-..
T Consensus 168 ~ng~~~----~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia--- 240 (637)
T COG4248 168 ANGTLH----LCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA--- 240 (637)
T ss_pred cCCceE----ecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh---
Confidence 222222 2344889999999644 44557789999999999999986 9999764322111111110000
Q ss_pred cCCccchhcccc--cc----CCCCHHHHHHHHHHHhhccCC--CCCCCCCHHHHHHHHHHhhhhcC
Q 007088 534 TNSSLETAIDKS--LL----GNGFDGELHQFLRVACNCVLP--TPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 534 ~~~~~~~~~d~~--l~----~~~~~~~~~~l~~li~~cl~~--dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
.+.....-+.. +. .-..+--...+..+..+|+.. ++.-|||++-.+..|.++.++..
T Consensus 241 -~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 241 -HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred -cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 00000000000 00 000111223344444478754 47799999999999998877643
No 468
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.83 E-value=3.6e-08 Score=95.06 Aligned_cols=144 Identities=19% Similarity=0.189 Sum_probs=102.8
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc-----------------------cCHHHHHHHHHHH
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ-----------------------HSEKEFLSEINTL 355 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------------------~~~~~~~~E~~~l 355 (618)
..+.+-..-+.+..+||-|--+.||.|..+.|.++|||.=+... ......++|.++|
T Consensus 84 ~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L 163 (304)
T COG0478 84 HALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEAL 163 (304)
T ss_pred HHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHH
Confidence 33333333345678999999999999999999999999642110 1123457899999
Q ss_pred hcCCCC--CccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecC
Q 007088 356 GSVRHR--NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRN 433 (618)
Q Consensus 356 ~~l~h~--niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 433 (618)
.++... .+.+.+++ +...+||||++|-.|...- ++....-.++..|+.-+.-+-.. ||||+|
T Consensus 164 ~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiVHGD 227 (304)
T COG0478 164 QRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIVHGD 227 (304)
T ss_pred HHhhhcCCCCCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---CccccC
Confidence 999654 67777765 4568999999986554432 12223344555555555555566 999999
Q ss_pred CCCCCeeeCCCCceEEcccCccccc
Q 007088 434 ISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 434 lkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
+++-||+++++|.+.++||--+...
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAVPI 252 (304)
T ss_pred CchheEEEecCCCEEEEeCcccccC
Confidence 9999999999999999999766543
No 469
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.83 E-value=4.9e-09 Score=118.26 Aligned_cols=99 Identities=26% Similarity=0.486 Sum_probs=73.0
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .||..+. .+|+.|+|++|++. .||..+. ++|+.|+
T Consensus 199 ~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~ 268 (754)
T PRK15370 199 EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEMELSINRIT-ELPERLP--SALQSLD 268 (754)
T ss_pred cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEECcCCccC-cCChhHh--CCCCEEE
Confidence 46788999999999 6787664 58889999999888 6887653 35777778877777 6776654 4677777
Q ss_pred ccCcccCCCCCccccccccccccccccccccC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTG 193 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g 193 (618)
|++|+|+ .+|..+. .+|+.|+|++|+|++
T Consensus 269 Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 269 LFHNKIS-CLPENLP--EELRYLSVYDNSIRT 297 (754)
T ss_pred CcCCccC-ccccccC--CCCcEEECCCCcccc
Confidence 7777777 4666553 467777777777765
No 470
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.80 E-value=3.3e-09 Score=119.05 Aligned_cols=114 Identities=25% Similarity=0.275 Sum_probs=68.2
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
.++.|+|++|+|++ +|... .+|+.|++++|+|+ .||.. +++|+.|+|++|+|+ .+|... ++|+.|+|
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~-~LP~l----~~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdL 409 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNRLT-SLPVLP---SELKELMV 409 (788)
T ss_pred ccceEecCCCccCC-CCCCC---cccceehhhccccc-cCccc----ccccceEEecCCccc-CCCCcc---cCCCEEEc
Confidence 45566666666663 44322 34445555555555 35531 345777788888877 466543 46777888
Q ss_pred cCcccCCCCCccccccccccccccccccccCCCCCCC-cc-ccccccccCCCCC
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFA-NV-NFTAEDFANNSGL 214 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~-~~-~~~~~~~~~n~~~ 214 (618)
++|+|++ +|.. ..+|+.|++++|+|+ .+|... .+ .+..+++++|+..
T Consensus 410 S~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 410 SGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred cCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCC
Confidence 8888873 6653 245677788888877 466422 11 4556677777643
No 471
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.78 E-value=1.7e-08 Score=113.35 Aligned_cols=37 Identities=27% Similarity=0.463 Sum_probs=26.6
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPS 124 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~ 124 (618)
+++.|+|++|+|+ .+|.. +++|++|+|++|+|+ .+|.
T Consensus 223 ~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~ 259 (788)
T PRK15387 223 HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPV 259 (788)
T ss_pred CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccC
Confidence 5677888888777 46642 467888888888887 5664
No 472
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.78 E-value=3.6e-09 Score=97.76 Aligned_cols=107 Identities=23% Similarity=0.376 Sum_probs=37.5
Q ss_pred CCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccc-ccccc
Q 007088 102 IERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQL-GLLNR 180 (618)
Q Consensus 102 ~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l-~~~~~ 180 (618)
+.+..++++|+|.+|.++ .|. .++..+.+|+.|||++|.++ .|+ .+..|++|+.|++++|+++ .+++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 567778999999999999 675 46645899999999999999 675 5888999999999999999 565555 46899
Q ss_pred ccccccccccccCCCC--CCCc-cccccccccCCCC
Q 007088 181 IKTFSVASNLLTGPVP--SFAN-VNFTAEDFANNSG 213 (618)
Q Consensus 181 L~~l~l~~N~l~g~ip--~~~~-~~~~~~~~~~n~~ 213 (618)
|+.|++++|++...-- .... .++..+++.+||-
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv 125 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPV 125 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcc
Confidence 9999999999975311 1111 1466778888863
No 473
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.71 E-value=8.2e-09 Score=78.30 Aligned_cols=60 Identities=35% Similarity=0.515 Sum_probs=54.3
Q ss_pred CCCCEEEeeCCCCcccCC-CCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccc
Q 007088 131 QYVTSLDLSSNSLSGEIP-SGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLL 191 (618)
Q Consensus 131 ~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l 191 (618)
++|++|+|++|+++ .|| ..+.++++|++|++++|+++...|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 47899999999999 566 5789999999999999999976677899999999999999986
No 474
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.69 E-value=2.3e-09 Score=111.64 Aligned_cols=106 Identities=24% Similarity=0.419 Sum_probs=86.8
Q ss_pred EEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEcc
Q 007088 84 VLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLN 163 (618)
Q Consensus 84 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~ 163 (618)
+..|-+++|+++ .+|..|+.+..|..||.+.|.+. ++|+.+++ |.+|+.|++..|++. .+|.+++.| .|..||+|
T Consensus 145 Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~-l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfS 219 (722)
T KOG0532|consen 145 LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGY-LTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFS 219 (722)
T ss_pred ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhh-HHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecc
Confidence 556777788877 78888888888888888888888 78888876 888888888888888 788888855 47888888
Q ss_pred CcccCCCCCccccccccccccccccccccCCC
Q 007088 164 NNRFTGKIPPQLGLLNRIKTFSVASNLLTGPV 195 (618)
Q Consensus 164 ~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~i 195 (618)
.|+++ .||-.|.+|+.|++|.|.+|.|..+.
T Consensus 220 cNkis-~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 220 CNKIS-YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred cCcee-ecchhhhhhhhheeeeeccCCCCCCh
Confidence 88888 78888888888888888888887654
No 475
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.65 E-value=3.4e-09 Score=116.14 Aligned_cols=103 Identities=28% Similarity=0.444 Sum_probs=91.0
Q ss_pred CcEEEEEecCCcceeeCCc-CCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPR-GIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~-~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
.++..|+|++|+|. .+|+ .+.+|..|++|+||+|+|. .||..+.. +..|++|...+|++. ..| ++.+++.|+.+
T Consensus 383 ~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~-~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~l 457 (1081)
T KOG0618|consen 383 KHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVAN-LGRLHTLRAHSNQLL-SFP-ELAQLPQLKVL 457 (1081)
T ss_pred cceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHh-hhhhHHHhhcCCcee-ech-hhhhcCcceEE
Confidence 57999999999998 5665 4889999999999999999 99998876 999999999999999 789 89999999999
Q ss_pred EccCcccCCC-CCcccccccccccccccccc
Q 007088 161 KLNNNRFTGK-IPPQLGLLNRIKTFSVASNL 190 (618)
Q Consensus 161 ~l~~N~l~g~-~p~~l~~~~~L~~l~l~~N~ 190 (618)
|+|.|+|+-. +|..+- -++|++|||++|.
T Consensus 458 DlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 458 DLSCNNLSEVTLPEALP-SPNLKYLDLSGNT 487 (1081)
T ss_pred ecccchhhhhhhhhhCC-CcccceeeccCCc
Confidence 9999999843 444432 3899999999997
No 476
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.65 E-value=8.6e-09 Score=110.54 Aligned_cols=154 Identities=19% Similarity=0.220 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccC-----CCCcccccCCCCCC
Q 007088 411 AIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNG-----EFGDLGYVAPEYPR 485 (618)
Q Consensus 411 ~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~-----~~gt~~y~aPE~~~ 485 (618)
+.+++.|+.|+|... ++||++|.|++|.++..+..||+.|+.+..........-..+.. ......|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 334558999999875 89999999999999999999999999886654421111000000 11356899999999
Q ss_pred CCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhh
Q 007088 486 TLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACN 564 (618)
Q Consensus 486 ~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~ 564 (618)
+...+.++|+||+|+++|.+.. |+.-+........+ . ...... +... .....+.+.++.+-+.+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-----~-~~~~~~--------~~~~-~~~s~~~p~el~~~l~k 247 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-----S-FSRNLL--------NAGA-FGYSNNLPSELRESLKK 247 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchh-----h-hhhccc--------cccc-ccccccCcHHHHHHHHH
Confidence 9888999999999999999994 55444433221111 0 000000 0000 00112334455555668
Q ss_pred ccCCCCCCCCCHHHHHH
Q 007088 565 CVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 565 cl~~dP~~RPs~~evl~ 581 (618)
++..++.-||++.++..
T Consensus 248 ~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 248 LLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HhcCCcccCcchhhhhc
Confidence 99999999998777643
No 477
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.62 E-value=8.5e-08 Score=115.28 Aligned_cols=125 Identities=18% Similarity=0.278 Sum_probs=70.1
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|+++.+. .+|..+..+++|+.|+|++|..-+.+|. +. .+++|+.|+|++|..-..+|.++++|++|+.|+
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls-~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LS-MATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cc-cCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 34555666666555 4555566666666666665544445553 33 266666666666554456666666666666666
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANN 211 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n 211 (618)
|++|..-+.+|..+ ++++|+.|++++|...+.+|.... ++..+++.+|
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~-nL~~L~L~~n 735 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDIST-NISWLDLDET 735 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccC-CcCeeecCCC
Confidence 66654444556544 556666666666655555554332 3444444444
No 478
>PRK09902 hypothetical protein; Provisional
Probab=98.59 E-value=4.7e-07 Score=85.59 Aligned_cols=137 Identities=13% Similarity=0.100 Sum_probs=103.3
Q ss_pred EeecCCeeEEEEEeCCCcEEEEEEecc----C---ccCHHHHHHHHHHHhcCCCC--CccceeEEEE-eC----CeeEEE
Q 007088 314 IGTGRTGATYIAMLPGGCFIMIKRLED----S---QHSEKEFLSEINTLGSVRHR--NLVPLLGFCV-AK----KERLLV 379 (618)
Q Consensus 314 lG~G~~g~Vy~~~~~~~~~vavK~~~~----~---~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~-~~----~~~~lV 379 (618)
-|+||.+.|++....+. .+-+|+-.. + ......|.+|+..+.++... .+.++. ++. .. ...+||
T Consensus 26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 46789999999887554 688887652 1 23567899999999998532 345555 332 11 235799
Q ss_pred EeecCC-CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc--eEEcccCccc
Q 007088 380 YSYLEN-GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE--PKLSDFGLAR 456 (618)
Q Consensus 380 ~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~a~ 456 (618)
+|-+++ -+|.+++..... .+.+...+..+..+++..++-||+. |+.|+|+.+.||+++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~~--~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV--SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCc--CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998763 478888755432 3467788889999999999999999 9999999999999986666 9999998765
Q ss_pred c
Q 007088 457 L 457 (618)
Q Consensus 457 ~ 457 (618)
.
T Consensus 179 ~ 179 (216)
T PRK09902 179 R 179 (216)
T ss_pred h
Confidence 4
No 479
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.57 E-value=1.2e-06 Score=83.85 Aligned_cols=155 Identities=17% Similarity=0.261 Sum_probs=108.8
Q ss_pred ccccCHHHHHHhhccCCCCcEEe---ecCCeeEEEEEeCCCcEEEEEEeccCcc--------------------CHHH--
Q 007088 293 VEKMRLSDLMKATNSFSKNNIIG---TGRTGATYIAMLPGGCFIMIKRLEDSQH--------------------SEKE-- 347 (618)
Q Consensus 293 ~~~~~~~~l~~~~~~y~~~~~lG---~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------------~~~~-- 347 (618)
....+++.+....++..+....| +|.-+.||+|...++..+|+|+++.+.. ..++
T Consensus 32 ~D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 32 FDKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred hhhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHH
Confidence 45667778888777777766655 5566689999988899999999864211 1111
Q ss_pred ---HHHHHHHHhcCC--CCCccceeEEEEeCCeeEEEEeecCCC-ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 007088 348 ---FLSEINTLGSVR--HRNLVPLLGFCVAKKERLLVYSYLENG-TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWL 421 (618)
Q Consensus 348 ---~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~L 421 (618)
..+|+.-|.++. +-.+.+.+++. +-.+||||+... .-.-.|.+ .++...+...+..++++.+.-|
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-----v~~e~~e~~~~~~~~v~~~~~l 182 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD-----VPLELEEAEGLYEDVVEYMRRL 182 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc-----CCcCchhHHHHHHHHHHHHHHH
Confidence 356777777774 44555666654 336999999643 11222222 2233336777888888888888
Q ss_pred HhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 422 HHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 422 H~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
-..+ ++||+||+.-|||+. ++.+.++|||-|....
T Consensus 183 ~~~a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 183 YKEA--GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred HHhc--CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 8733 999999999999999 7799999999887654
No 480
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.56 E-value=2e-07 Score=112.06 Aligned_cols=128 Identities=22% Similarity=0.301 Sum_probs=103.0
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|++.++.+. .+|..+ .+.+|+.|+|++|++. .+|.++.. +++|+.|+|++|+..+.+|. ++.+++|+.|+
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~-l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~ 663 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHS-LTGLRNIDLRGSKNLKEIPD-LSMATNLETLK 663 (1153)
T ss_pred cccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccccccc-CCCCCEEECCCCCCcCcCCc-cccCCcccEEE
Confidence 35677777777765 777776 5789999999999998 78888765 99999999998876668884 88999999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNSGL 214 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~~~ 214 (618)
|++|.....+|..++++++|+.|++++|..-+.+|.... .++..+.+++|..+
T Consensus 664 L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L 717 (1153)
T PLN03210 664 LSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRL 717 (1153)
T ss_pred ecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCc
Confidence 999887788999999999999999999877777776432 25666777777544
No 481
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.56 E-value=5.2e-08 Score=67.84 Aligned_cols=41 Identities=34% Similarity=0.614 Sum_probs=28.0
Q ss_pred cchHHHHHHHHHhccC-CCCccccCccCCCCCCCCCCcccceecC
Q 007088 34 LNDIECLKSVKNSLED-PFNYLTTSWNFNNNTEGFICQFTGVDCW 77 (618)
Q Consensus 34 ~~~~~~L~~~k~~~~~-~~~~l~~~W~~~~~~~~~~c~w~gv~c~ 77 (618)
..|++||++||+++.+ |.+.+. +|+.++ ..+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~-~W~~~~--~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLS-SWNPSS--DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCT-T--TT----S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccc-cCCCcC--CCCCeeeccEEeC
Confidence 4689999999999985 545554 998653 3579999999994
No 482
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.55 E-value=3.7e-07 Score=87.88 Aligned_cols=107 Identities=24% Similarity=0.232 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHhcCCC--CCccceeEEEEeCC----eeEEEEeecCCC-ccccccCCCCCCCcCCCHHHHHHHHHHHHHH
Q 007088 345 EKEFLSEINTLGSVRH--RNLVPLLGFCVAKK----ERLLVYSYLENG-TLYDKLHPAEHEVMHMDWPLRLRIAIGSARG 417 (618)
Q Consensus 345 ~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~----~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~ 417 (618)
.....+|...+.++.. -.+++.+++..... ..++|+|++++. +|.+++..... .+......++.+++..
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHH
Confidence 3457788888887753 34566677766532 458999999874 78888865332 5566778999999999
Q ss_pred HHHHHhCCCCCceecCCCCCCeeeCCCC---ceEEcccCccccc
Q 007088 418 LAWLHHNCNPRIIHRNISSKCILLDGDF---EPKLSDFGLARLM 458 (618)
Q Consensus 418 L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfG~a~~~ 458 (618)
++-||.. ||+|+|+++.|||++.+. .+.++||+.++..
T Consensus 131 i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 131 IAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999 999999999999999887 8999999987653
No 483
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.51 E-value=2.2e-07 Score=100.16 Aligned_cols=139 Identities=19% Similarity=0.216 Sum_probs=93.0
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCccC-----------------------------------------HHHHHH
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHS-----------------------------------------EKEFLS 350 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~~~ 350 (618)
+-|+.++-|.||+|++.+|+.||||+.+..-.. +-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 679999999999999999999999998542100 012445
Q ss_pred HHHHHhcCC-----CCCccceeEEEE-eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHH-HHHHHh
Q 007088 351 EINTLGSVR-----HRNLVPLLGFCV-AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARG-LAWLHH 423 (618)
Q Consensus 351 E~~~l~~l~-----h~niv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~-L~~LH~ 423 (618)
|...+.+++ .+++ ++=.++. -.....++|||++|-.+.+...-... ..+ +..++..++++ +..+-.
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~---g~d---~k~ia~~~~~~f~~q~~~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA---GID---RKELAELLVRAFLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhc---CCC---HHHHHHHHHHHHHHHHHh
Confidence 555555542 2332 2223332 24567899999999888887422221 133 23333333332 223333
Q ss_pred CCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 424 NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 424 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
. |++|.|..|.||+++.+|++.+.|||+...+++
T Consensus 284 d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 D---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred c---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 4 899999999999999999999999999987654
No 484
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.50 E-value=1e-08 Score=105.87 Aligned_cols=131 Identities=21% Similarity=0.226 Sum_probs=94.8
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCC---CCeEEccCCcCcc----ccCchhhhcC-CCCCEEEeeCCCCccc----CC
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTS---LTGLDLSSNNLSG----SIPSDISSRL-QYVTSLDLSSNSLSGE----IP 148 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~---L~~L~l~~n~l~g----~ip~~~~~~l-~~L~~L~l~~N~l~g~----ip 148 (618)
..+++.|+|++|.+.+..+..+..+.+ |++|+|++|++++ .+...+.. + ++|+.|+|++|++++. ++
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~-~~~~L~~L~L~~n~l~~~~~~~~~ 158 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKD-LPPALEKLVLGRNRLEGASCEALA 158 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHh-CCCCceEEEcCCCcCCchHHHHHH
Confidence 468999999999998777777666666 9999999999983 33334443 5 8899999999999953 33
Q ss_pred CCCcCCCCCcEEEccCcccCCC----CCccccccccccccccccccccCCCCCC----Cc--cccccccccCCC
Q 007088 149 SGLANCTFLNVLKLNNNRFTGK----IPPQLGLLNRIKTFSVASNLLTGPVPSF----AN--VNFTAEDFANNS 212 (618)
Q Consensus 149 ~~~~~l~~L~~l~l~~N~l~g~----~p~~l~~~~~L~~l~l~~N~l~g~ip~~----~~--~~~~~~~~~~n~ 212 (618)
..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++.-+.. .. .++..+++++|+
T Consensus 159 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~ 232 (319)
T cd00116 159 KALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNN 232 (319)
T ss_pred HHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCc
Confidence 4566778899999999999853 3445556678999999999987543211 00 135566676663
No 485
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.47 E-value=2.8e-08 Score=102.59 Aligned_cols=111 Identities=25% Similarity=0.426 Sum_probs=73.2
Q ss_pred CcEEEEEecCCccee----eCCcCCCCC-CCCCeEEccCCcCccccC----chhhhcCCCCCEEEeeCCCCccc----CC
Q 007088 82 NKVLNIRLSDMGLKG----QFPRGIERC-TSLTGLDLSSNNLSGSIP----SDISSRLQYVTSLDLSSNSLSGE----IP 148 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g----~~p~~~~~l-~~L~~L~l~~n~l~g~ip----~~~~~~l~~L~~L~l~~N~l~g~----ip 148 (618)
.+++.|+|++|++++ .+...+..+ .+|+.|+|++|.+++..+ ..+. .+++|++|+|++|.+++. ++
T Consensus 108 ~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~~~~~l~ 186 (319)
T cd00116 108 SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR-ANRDLKELNLANNGIGDAGIRALA 186 (319)
T ss_pred CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH-hCCCcCEEECcCCCCchHHHHHHH
Confidence 347888888887763 344455666 778888888888875332 2232 356788888888887742 33
Q ss_pred CCCcCCCCCcEEEccCcccCCC----CCccccccccccccccccccccC
Q 007088 149 SGLANCTFLNVLKLNNNRFTGK----IPPQLGLLNRIKTFSVASNLLTG 193 (618)
Q Consensus 149 ~~~~~l~~L~~l~l~~N~l~g~----~p~~l~~~~~L~~l~l~~N~l~g 193 (618)
..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 187 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 187 EGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 3445556788888888877643 23345566778888888887775
No 486
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.46 E-value=3e-08 Score=95.71 Aligned_cols=102 Identities=24% Similarity=0.304 Sum_probs=54.2
Q ss_pred EEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEcc
Q 007088 84 VLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLN 163 (618)
Q Consensus 84 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~ 163 (618)
++.||||+|.++ .|..+..-++.++.|+||.|++. .+-. +.. |++|+.||||+|.|+ .+-.+=..|-+.++|.|+
T Consensus 286 LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~-L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 286 LTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAE-LPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhh-cccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 445666666655 55555555566666666666665 3433 332 566666666666665 344333344445555555
Q ss_pred CcccCCCCCcccccccccccccccccccc
Q 007088 164 NNRFTGKIPPQLGLLNRIKTFSVASNLLT 192 (618)
Q Consensus 164 ~N~l~g~~p~~l~~~~~L~~l~l~~N~l~ 192 (618)
+|.+.. + +.++.+-+|..||+.+|++.
T Consensus 361 ~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 361 QNKIET-L-SGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhhHhh-h-hhhHhhhhheeccccccchh
Confidence 555431 1 22444555555666666553
No 487
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.45 E-value=2.5e-06 Score=83.21 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=86.8
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCC--ccceeEEEEeCCeeEEEEeecCCCc-c
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN--LVPLLGFCVAKKERLLVYSYLENGT-L 388 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gs-L 388 (618)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 46899999999984 24467788876533 4456789999998886433 5677888877777889999999863 2
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHH---------------------------------------HHHHhC-CCCC
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGL---------------------------------------AWLHHN-CNPR 428 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L---------------------------------------~~LH~~-~~~~ 428 (618)
...+.. +......++.++++.+ .+|... ..+.
T Consensus 83 ~~~~~~--------~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 83 SRIISD--------NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred hhhhcC--------CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 211110 0111111222222222 222211 1235
Q ss_pred ceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 429 IIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 429 ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++|+|+.|.||++++++ +.++||+.+.
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 78999999999999888 9999999875
No 488
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.43 E-value=5.7e-08 Score=93.78 Aligned_cols=119 Identities=24% Similarity=0.304 Sum_probs=94.9
Q ss_pred ccceecCCCC---CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccC
Q 007088 71 FTGVDCWHPD---ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEI 147 (618)
Q Consensus 71 w~gv~c~~~~---~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~i 147 (618)
..-++|.+-. ..+++.|+||.|++. .+-. +..|.+|+.||||+|.|+ .+-. +-.+|-+.++|.|+.|.+. .+
T Consensus 293 ~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~G-wh~KLGNIKtL~La~N~iE-~L 367 (490)
T KOG1259|consen 293 GNLITQIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVG-WHLKLGNIKTLKLAQNKIE-TL 367 (490)
T ss_pred ccchhhhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhh-hHhhhcCEeeeehhhhhHh-hh
Confidence 3345564322 368999999999998 4433 889999999999999999 5544 3345889999999999987 33
Q ss_pred CCCCcCCCCCcEEEccCcccCCCCC--ccccccccccccccccccccCCCC
Q 007088 148 PSGLANCTFLNVLKLNNNRFTGKIP--PQLGLLNRIKTFSVASNLLTGPVP 196 (618)
Q Consensus 148 p~~~~~l~~L~~l~l~~N~l~g~~p--~~l~~~~~L~~l~l~~N~l~g~ip 196 (618)
+.++.|-+|..||+++|++. .+- ..+|+++-|+.+.|-+|.+++.+-
T Consensus 368 -SGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 368 -SGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred -hhhHhhhhheeccccccchh-hHHHhcccccccHHHHHhhcCCCccccch
Confidence 56889999999999999997 332 458999999999999999998764
No 489
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.42 E-value=1.3e-07 Score=100.88 Aligned_cols=103 Identities=32% Similarity=0.552 Sum_probs=69.9
Q ss_pred cEEEEEecCCcceeeCCcCCCCCC-CCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCT-SLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~-~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.++.|++.+|+++ .||+.++.++ +|+.|++++|++. .+|..+.. +++|+.|++++|+++ .+|...+.++.|+.|+
T Consensus 117 ~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~-l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 117 NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRN-LPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhc-cccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 4666777777666 6666666664 7777777777777 66655554 777777777777777 6666666667777777
Q ss_pred ccCcccCCCCCcccccccccccccccccc
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNL 190 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~ 190 (618)
+++|+++ .+|..+..+..|+.|.+++|.
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~ 220 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNS 220 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCc
Confidence 7777776 566665555667777777774
No 490
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.40 E-value=2.9e-08 Score=85.16 Aligned_cols=102 Identities=24% Similarity=0.363 Sum_probs=55.6
Q ss_pred EEEecCCcceeeCCcC---CCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 86 NIRLSDMGLKGQFPRG---IERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 86 ~l~l~~~~l~g~~p~~---~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
.++|+++.|- .|+.. +....+|+..+|++|.|- .+|+.+....+.+++|+|++|.++ .+|.+++.++.|+.|++
T Consensus 31 ~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 31 FLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 4455544432 33332 233344444566666665 556555554445566666666666 56666666666666666
Q ss_pred cCcccCCCCCccccccccccccccccccc
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLL 191 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l 191 (618)
+.|.|. ..|.-+..|.+|..|+..+|..
T Consensus 108 ~~N~l~-~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 108 RFNPLN-AEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred ccCccc-cchHHHHHHHhHHHhcCCCCcc
Confidence 666665 4455555555666666555554
No 491
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.39 E-value=1.4e-08 Score=87.16 Aligned_cols=112 Identities=24% Similarity=0.341 Sum_probs=92.1
Q ss_pred CCcEEEEEecCCcceeeCCcCCCC-CCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIER-CTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNV 159 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~-l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~ 159 (618)
..+++.++|++|++. .+|+.|.. .+.++.|+|++|.++ .+|.++.. ++.|+.|++++|.|. ..|.-+..|.+|..
T Consensus 52 ~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aa-m~aLr~lNl~~N~l~-~~p~vi~~L~~l~~ 127 (177)
T KOG4579|consen 52 GYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAA-MPALRSLNLRFNPLN-AEPRVIAPLIKLDM 127 (177)
T ss_pred CceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhh-hHHhhhcccccCccc-cchHHHHHHHhHHH
Confidence 457899999999999 66766654 468999999999999 89999876 999999999999999 78988999999999
Q ss_pred EEccCcccCCCCCccccccccccccccccccccCCCCC
Q 007088 160 LKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197 (618)
Q Consensus 160 l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~ 197 (618)
||..+|.+. .||-.+-.-+..-..++.+|.+.|.-|.
T Consensus 128 Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 128 LDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred hcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 999999987 7876644333444556677777776664
No 492
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.36 E-value=2.8e-06 Score=80.63 Aligned_cols=137 Identities=15% Similarity=0.193 Sum_probs=91.1
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCH-H---------HHHHHHHHHhcCCC---CCccceeEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSE-K---------EFLSEINTLGSVRH---RNLVPLLGFC 370 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~---------~~~~E~~~l~~l~h---~niv~l~~~~ 370 (618)
..++|...+.+-......|.+... +|..+++|..+...... + ...+++..+.+++. ...+.++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 346788778887777777777666 56788899876532211 1 12344444444432 2333333332
Q ss_pred Ee-----CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC
Q 007088 371 VA-----KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF 445 (618)
Q Consensus 371 ~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 445 (618)
.. ....+++|||++|..|.+... ++. .++..+..++.-||+. |++|+|..|.|++++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~- 171 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN- 171 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC-
Confidence 22 234568999999988876542 222 2556677889999999 99999999999999866
Q ss_pred ceEEcccCcccc
Q 007088 446 EPKLSDFGLARL 457 (618)
Q Consensus 446 ~~kl~DfG~a~~ 457 (618)
.++++||+..+.
T Consensus 172 ~i~iID~~~k~~ 183 (229)
T PF06176_consen 172 GIRIIDTQGKRM 183 (229)
T ss_pred cEEEEECccccc
Confidence 499999987653
No 493
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.30 E-value=2.1e-07 Score=99.26 Aligned_cols=124 Identities=28% Similarity=0.433 Sum_probs=100.7
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
+++.|++++|++. .+|..+++++.|+.|++++|+++ .+|...+. +++|+.|++++|+++ .||..+..+..|++|++
T Consensus 141 nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~-~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~ 216 (394)
T COG4886 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSN-LSNLNNLDLSGNKIS-DLPPEIELLSALEELDL 216 (394)
T ss_pred hcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhh-hhhhhheeccCCccc-cCchhhhhhhhhhhhhh
Confidence 7999999999998 88888999999999999999999 89987654 899999999999999 89998878888999999
Q ss_pred cCcccCCCCCccccccccccccccccccccCCC--CCCCccccccccccCCC
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPV--PSFANVNFTAEDFANNS 212 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~i--p~~~~~~~~~~~~~~n~ 212 (618)
++|++. .+|..+.++.++..+.+++|++.-.+ ..... .+..+++++|.
T Consensus 217 ~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~-~l~~L~~s~n~ 266 (394)
T COG4886 217 SNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLS-NLETLDLSNNQ 266 (394)
T ss_pred cCCcce-ecchhhhhcccccccccCCceeeeccchhcccc-ccceecccccc
Confidence 999644 56777888888888888888876521 11111 35556666664
No 494
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.25 E-value=8.2e-06 Score=79.86 Aligned_cols=144 Identities=17% Similarity=0.129 Sum_probs=84.7
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCC--CccceeEEEEeC---CeeEEEEeecCC
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHR--NLVPLLGFCVAK---KERLLVYSYLEN 385 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lV~e~~~~ 385 (618)
++.++.|..+.||+....+ ..+++|..... .....+.+|..+++.+... .+.+++.+.... ...+++|+++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 3579999999999999877 58899987665 4556788899888888533 356777654333 346899999999
Q ss_pred Ccccccc-------------------CCCCCCCcCCCHHH---------HHHH------------HHHHHH-HHHHHHhC
Q 007088 386 GTLYDKL-------------------HPAEHEVMHMDWPL---------RLRI------------AIGSAR-GLAWLHHN 424 (618)
Q Consensus 386 gsL~~~l-------------------~~~~~~~~~l~~~~---------~~~i------------~~~i~~-~L~~LH~~ 424 (618)
.++.... +..........+.. .... ...+.. .+..+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 8777600 01100001111100 0000 111222 23333321
Q ss_pred ----CCCCceecCCCCCCeeeC-CCCceEEcccCccc
Q 007088 425 ----CNPRIIHRNISSKCILLD-GDFEPKLSDFGLAR 456 (618)
Q Consensus 425 ----~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG~a~ 456 (618)
....++|+|+.|.||+++ +++.+.|+||+.+.
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 233699999999999999 66666899998764
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.24 E-value=2.5e-08 Score=106.57 Aligned_cols=128 Identities=25% Similarity=0.401 Sum_probs=92.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCC-CCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPS-GLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~l~~L~~l 160 (618)
+.+...+.+.|.|+ .+..++.-++.|+.|||++|+|. ..- .+- .|++|++|||++|.|. .+|. +...+. |+.|
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~-~v~-~Lr-~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L 237 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFT-KVD-NLR-RLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLL 237 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhh-hhH-HHH-hcccccccccccchhc-cccccchhhhh-heee
Confidence 35666777888887 67777888889999999999998 443 454 4889999999999998 6774 233444 8889
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCC---CCCCccccccccccCCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPV---PSFANVNFTAEDFANNSGLCGK 217 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~i---p~~~~~~~~~~~~~~n~~~c~~ 217 (618)
.|+||-++. + ..+.+|.+|+.|||+.|-|++-- |-+.-..+..+.+.|||.-|.+
T Consensus 238 ~lrnN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 238 NLRNNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred eecccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 999998872 3 23678888999999999887642 2111114566778888876654
No 496
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.20 E-value=9.1e-07 Score=61.72 Aligned_cols=36 Identities=36% Similarity=0.607 Sum_probs=18.8
Q ss_pred CCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccC
Q 007088 132 YVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFT 168 (618)
Q Consensus 132 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~ 168 (618)
+|++|+|++|+++ .||+++++|++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 45555555555555555555555
No 497
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.17 E-value=2.7e-07 Score=98.06 Aligned_cols=184 Identities=17% Similarity=0.086 Sum_probs=132.6
Q ss_pred CCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCC-ccceeEEEEeCCeeEEEEeecCCC-c
Q 007088 310 KNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN-LVPLLGFCVAKKERLLVYSYLENG-T 387 (618)
Q Consensus 310 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~e~~~~g-s 387 (618)
..+-.++|+++.+||.+-...+....+.+... ....-++++|.+++||| .++.++-+..++..+++++++.++ +
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 34457889999999987433333335544332 34567889999999999 666677676677888999999876 3
Q ss_pred cccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccc
Q 007088 388 LYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLST 467 (618)
Q Consensus 388 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 467 (618)
-........ ..+...+...+.+.-.++++|+|+. .=+|+| ||+..+ +..+..||+....+.....
T Consensus 322 ~~~~~~~se---~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~---- 386 (829)
T KOG0576|consen 322 SALEMTVSE---IALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMK---- 386 (829)
T ss_pred ccccCChhh---Hhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCcccc----
Confidence 222222111 2344555566777778899999987 568998 777665 5799999999887765431
Q ss_pred cccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 007088 468 FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513 (618)
Q Consensus 468 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~ 513 (618)
.+...+++.++|||......+..+.|+|+.|+--.++--|.+|-.
T Consensus 387 -~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 387 -PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred -cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 123348999999999999999999999999987777777777654
No 498
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.16 E-value=1.7e-05 Score=78.59 Aligned_cols=140 Identities=14% Similarity=0.050 Sum_probs=85.4
Q ss_pred EeecCC-eeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEeecCCCccccc
Q 007088 314 IGTGRT-GATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYLENGTLYDK 391 (618)
Q Consensus 314 lG~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~ 391 (618)
|-.|.+ ..||+...++ ..+++|+..... ..++.+|++++..+. +--+.+++++....+..++|||+++|.++.+.
T Consensus 6 ~~~g~~~~~v~~~~~~~-~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGKN-PGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCCC-CcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 445555 7899997654 688889876543 345678888888773 44566778877766678999999999777643
Q ss_pred cC-------------------CCCCCCcCCCH--HHHHHHHH--------------------HHHHHHHHHHhC----CC
Q 007088 392 LH-------------------PAEHEVMHMDW--PLRLRIAI--------------------GSARGLAWLHHN----CN 426 (618)
Q Consensus 392 l~-------------------~~~~~~~~l~~--~~~~~i~~--------------------~i~~~L~~LH~~----~~ 426 (618)
.. .......++.. ........ .+...+..|-.. ..
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 21 11100011110 00000000 011111222111 13
Q ss_pred CCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 427 PRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 427 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
+.++|+|+.|.||+++++....|+||+.+.
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 468999999999999998778899998775
No 499
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.09 E-value=1.2e-05 Score=86.55 Aligned_cols=140 Identities=17% Similarity=0.150 Sum_probs=90.2
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccC--------------------------------HH------HHHHHH
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHS--------------------------------EK------EFLSEI 352 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------------~~------~~~~E~ 352 (618)
.+.||.-+.|.||+|++++|+.||||+-+..-.. .+ +|.+|.
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 3679999999999999999999999997643110 01 244454
Q ss_pred HHHhcC----CCCC------ccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHH
Q 007088 353 NTLGSV----RHRN------LVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422 (618)
Q Consensus 353 ~~l~~l----~h~n------iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH 422 (618)
+-..++ .|-+ |.+++-.+ .....|+||||+|..+.+.-.-.. ..++.. .++..+.++. ++
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~---~gi~~~---~i~~~l~~~~--~~ 315 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDK---RGISPH---DILNKLVEAY--LE 315 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHH---cCCCHH---HHHHHHHHHH--HH
Confidence 443333 3444 33333222 246789999999988777532221 124444 3333333332 22
Q ss_pred hCCCCCceecCCCCCCeeeC----CCCceEEcccCcccccCC
Q 007088 423 HNCNPRIIHRNISSKCILLD----GDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 423 ~~~~~~ivH~Dlkp~NIll~----~~~~~kl~DfG~a~~~~~ 460 (618)
.....|++|+|=.|.||++. .++.+.+-|||+......
T Consensus 316 qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 316 QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 22223899999999999998 367899999999887654
No 500
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.08 E-value=3e-06 Score=59.12 Aligned_cols=40 Identities=38% Similarity=0.699 Sum_probs=31.9
Q ss_pred CCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC
Q 007088 106 TSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP 148 (618)
Q Consensus 106 ~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip 148 (618)
++|++|+|++|+++ .||+++.. |++|+.|+|++|+++ .+|
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~-l~~L~~L~l~~N~i~-~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSN-LPNLETLNLSNNPIS-DIS 40 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTT-CTTSSEEEETSSCCS-BEG
T ss_pred CcceEEEccCCCCc-ccCchHhC-CCCCCEEEecCCCCC-CCc
Confidence 47899999999999 78887765 999999999999988 443
Done!